Query 018320
Match_columns 358
No_of_seqs 471 out of 3431
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 13:24:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018320.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018320hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4eqs_A Coenzyme A disulfide re 100.0 9.8E-48 3.3E-52 378.9 23.3 301 6-319 115-436 (437)
2 3iwa_A FAD-dependent pyridine 100.0 1.6E-45 5.6E-50 366.3 21.3 317 6-328 124-466 (472)
3 3ntd_A FAD-dependent pyridine 100.0 1.1E-44 3.8E-49 367.6 23.8 327 6-338 116-483 (565)
4 3ics_A Coenzyme A-disulfide re 100.0 3.4E-44 1.2E-48 366.1 25.5 326 6-340 151-501 (588)
5 3kd9_A Coenzyme A disulfide re 100.0 4.4E-43 1.5E-47 346.7 22.5 305 6-318 113-439 (449)
6 2cdu_A NADPH oxidase; flavoenz 100.0 8.4E-43 2.9E-47 344.9 23.6 310 6-323 116-447 (452)
7 3oc4_A Oxidoreductase, pyridin 100.0 4.6E-43 1.6E-47 346.9 20.5 305 6-319 114-438 (452)
8 2bc0_A NADH oxidase; flavoprot 100.0 2E-42 6.8E-47 345.7 24.7 308 6-320 148-489 (490)
9 3lxd_A FAD-dependent pyridine 100.0 1.6E-40 5.5E-45 325.0 35.3 287 6-299 118-408 (415)
10 3fg2_P Putative rubredoxin red 100.0 2.5E-40 8.7E-45 322.6 34.2 285 6-298 109-396 (404)
11 3ef6_A Toluene 1,2-dioxygenase 100.0 1.3E-40 4.5E-45 325.4 31.2 286 6-301 110-398 (410)
12 2gqw_A Ferredoxin reductase; f 100.0 1.7E-39 5.8E-44 317.3 32.7 277 6-295 112-393 (408)
13 1nhp_A NADH peroxidase; oxidor 100.0 4.8E-41 1.6E-45 331.9 20.4 304 6-316 114-439 (447)
14 3cgb_A Pyridine nucleotide-dis 100.0 2.8E-40 9.6E-45 329.4 25.1 303 6-316 151-476 (480)
15 1q1r_A Putidaredoxin reductase 100.0 5.3E-39 1.8E-43 316.0 30.8 283 6-295 113-402 (431)
16 3klj_A NAD(FAD)-dependent dehy 100.0 3.2E-38 1.1E-42 306.1 23.7 256 6-291 115-375 (385)
17 1mo9_A ORF3; nucleotide bindin 100.0 6.8E-37 2.3E-41 308.0 24.6 282 6-308 185-509 (523)
18 1zmd_A Dihydrolipoyl dehydroge 100.0 5E-37 1.7E-41 305.3 22.1 278 6-308 151-458 (474)
19 1ojt_A Surface protein; redox- 100.0 2.7E-37 9.1E-42 308.0 20.0 250 40-308 184-462 (482)
20 1xdi_A RV3303C-LPDA; reductase 100.0 2.6E-37 9E-42 309.3 19.4 276 6-308 155-456 (499)
21 2a8x_A Dihydrolipoyl dehydroge 100.0 3.9E-37 1.3E-41 305.2 20.3 274 7-308 146-449 (464)
22 2qae_A Lipoamide, dihydrolipoy 100.0 1.4E-36 4.8E-41 301.6 23.6 276 6-308 147-453 (468)
23 2hqm_A GR, grase, glutathione 100.0 1.1E-36 3.7E-41 303.4 22.1 276 6-308 159-466 (479)
24 4b1b_A TRXR, thioredoxin reduc 100.0 1.7E-37 5.8E-42 312.5 16.1 250 40-308 222-516 (542)
25 2wpf_A Trypanothione reductase 100.0 1.4E-36 4.6E-41 303.9 22.4 275 6-308 166-470 (495)
26 1ebd_A E3BD, dihydrolipoamide 100.0 1E-36 3.5E-41 301.6 21.2 275 6-308 144-446 (455)
27 1onf_A GR, grase, glutathione 100.0 3E-36 1E-40 301.8 24.6 284 6-308 152-491 (500)
28 1fec_A Trypanothione reductase 100.0 1.7E-36 5.7E-41 302.9 21.6 275 6-308 162-466 (490)
29 1dxl_A Dihydrolipoamide dehydr 100.0 1.6E-36 5.5E-41 301.1 20.5 276 6-308 150-455 (470)
30 1ges_A Glutathione reductase; 100.0 3.5E-36 1.2E-40 297.4 22.3 275 6-308 142-445 (450)
31 1v59_A Dihydrolipoamide dehydr 100.0 2.1E-36 7.1E-41 301.1 20.2 275 11-308 159-463 (478)
32 3dk9_A Grase, GR, glutathione 100.0 4.9E-36 1.7E-40 298.5 21.7 252 40-308 186-473 (478)
33 3lad_A Dihydrolipoamide dehydr 100.0 3.8E-36 1.3E-40 299.0 20.4 250 40-308 179-456 (476)
34 2v3a_A Rubredoxin reductase; a 100.0 9.6E-35 3.3E-39 281.2 29.2 258 6-277 112-374 (384)
35 3urh_A Dihydrolipoyl dehydroge 100.0 7.7E-36 2.6E-40 298.0 22.1 250 40-308 197-476 (491)
36 2eq6_A Pyruvate dehydrogenase 100.0 1.1E-35 3.7E-40 295.1 22.4 269 11-308 148-446 (464)
37 3l8k_A Dihydrolipoyl dehydroge 100.0 3.8E-36 1.3E-40 298.4 18.4 276 6-308 143-449 (466)
38 2r9z_A Glutathione amide reduc 100.0 1.6E-35 5.4E-40 293.8 21.8 274 6-308 141-443 (463)
39 1xhc_A NADH oxidase /nitrite r 100.0 3.7E-35 1.3E-39 282.8 23.2 240 6-272 112-353 (367)
40 4dna_A Probable glutathione re 100.0 1.6E-35 5.4E-40 293.7 21.1 273 7-308 145-445 (463)
41 3dgh_A TRXR-1, thioredoxin red 100.0 3.9E-35 1.4E-39 292.3 19.8 276 6-308 161-470 (483)
42 3ic9_A Dihydrolipoamide dehydr 100.0 3.4E-35 1.2E-39 293.6 18.6 249 40-308 173-458 (492)
43 1zk7_A HGII, reductase, mercur 100.0 2.2E-34 7.6E-39 285.7 23.6 274 6-308 149-447 (467)
44 2yqu_A 2-oxoglutarate dehydrog 100.0 1.1E-34 3.9E-39 286.9 19.9 276 6-308 140-440 (455)
45 3o0h_A Glutathione reductase; 100.0 8.2E-35 2.8E-39 290.2 18.9 250 40-308 190-465 (484)
46 1m6i_A Programmed cell death p 100.0 3.7E-34 1.3E-38 286.1 22.2 268 18-294 159-484 (493)
47 3qfa_A Thioredoxin reductase 1 100.0 1.5E-34 5.3E-39 290.6 19.2 277 6-308 184-498 (519)
48 3dgz_A Thioredoxin reductase 2 100.0 2E-34 6.7E-39 287.7 19.4 276 6-308 158-470 (488)
49 2x8g_A Thioredoxin glutathione 100.0 1.3E-33 4.6E-38 288.4 20.4 277 6-308 260-577 (598)
50 1lvl_A Dihydrolipoamide dehydr 100.0 3.9E-33 1.4E-37 276.2 21.5 248 40-308 170-443 (458)
51 4g6h_A Rotenone-insensitive NA 99.9 3.1E-27 1.1E-31 236.3 16.2 192 6-209 168-398 (502)
52 2ywl_A Thioredoxin reductase r 99.9 5.6E-24 1.9E-28 183.7 16.3 153 43-210 3-169 (180)
53 4a5l_A Thioredoxin reductase; 99.9 3.3E-25 1.1E-29 207.3 8.9 184 6-208 120-308 (314)
54 2zbw_A Thioredoxin reductase; 99.9 6.5E-24 2.2E-28 200.4 16.1 184 5-210 122-315 (335)
55 4gcm_A TRXR, thioredoxin reduc 99.9 5.7E-24 1.9E-28 199.3 13.6 180 6-208 115-302 (312)
56 1trb_A Thioredoxin reductase; 99.9 1E-23 3.6E-28 197.6 13.7 182 7-209 116-311 (320)
57 3ab1_A Ferredoxin--NADP reduct 99.9 1.5E-23 5.1E-28 200.3 14.4 187 4-211 131-327 (360)
58 1fl2_A Alkyl hydroperoxide red 99.9 4.4E-23 1.5E-27 192.6 16.4 178 7-209 115-302 (310)
59 2q7v_A Thioredoxin reductase; 99.9 2.6E-23 8.7E-28 195.8 14.9 179 6-210 122-310 (325)
60 3cty_A Thioredoxin reductase; 99.9 3.3E-23 1.1E-27 194.5 15.2 178 7-209 126-313 (319)
61 2q0l_A TRXR, thioredoxin reduc 99.9 2E-23 6.8E-28 195.0 13.5 179 6-209 113-306 (311)
62 3r9u_A Thioredoxin reductase; 99.9 4.1E-23 1.4E-27 192.6 15.3 180 6-209 117-309 (315)
63 3lzw_A Ferredoxin--NADP reduct 99.9 6.1E-23 2.1E-27 192.8 13.3 181 5-210 124-313 (332)
64 1vdc_A NTR, NADPH dependent th 99.9 6.4E-23 2.2E-27 193.4 13.2 155 40-209 158-320 (333)
65 3f8d_A Thioredoxin reductase ( 99.9 1.7E-22 5.9E-27 188.8 13.8 180 7-209 125-314 (323)
66 3itj_A Thioredoxin reductase 1 99.9 1.5E-22 5E-27 190.7 13.3 181 6-209 141-332 (338)
67 2vdc_G Glutamate synthase [NAD 99.9 3.8E-22 1.3E-26 197.2 13.4 186 6-209 219-441 (456)
68 3fbs_A Oxidoreductase; structu 99.9 2.8E-22 9.7E-27 185.3 10.3 171 6-209 111-289 (297)
69 3h8l_A NADH oxidase; membrane 99.9 1.5E-21 5.2E-26 189.9 15.3 187 6-210 112-334 (409)
70 2a87_A TRXR, TR, thioredoxin r 99.9 3.6E-22 1.2E-26 188.9 10.1 178 7-209 126-313 (335)
71 1hyu_A AHPF, alkyl hydroperoxi 99.9 1.4E-21 5E-26 196.2 14.3 178 7-209 326-513 (521)
72 3sx6_A Sulfide-quinone reducta 99.9 1E-20 3.5E-25 185.9 19.8 203 6-211 111-343 (437)
73 1cjc_A Protein (adrenodoxin re 99.9 8.3E-22 2.8E-26 195.0 11.4 192 7-210 107-393 (460)
74 3d1c_A Flavin-containing putat 99.9 3.2E-21 1.1E-25 184.2 12.9 164 40-211 165-338 (369)
75 4fk1_A Putative thioredoxin re 99.8 7.3E-22 2.5E-26 184.5 7.9 175 6-208 116-296 (304)
76 1gte_A Dihydropyrimidine dehyd 99.8 1.3E-20 4.4E-25 202.9 17.9 179 41-236 332-540 (1025)
77 1o94_A Tmadh, trimethylamine d 99.8 1.9E-21 6.6E-26 202.6 9.4 198 7-236 499-720 (729)
78 3vrd_B FCCB subunit, flavocyto 99.8 4.8E-21 1.6E-25 185.7 11.0 195 6-209 107-321 (401)
79 2gag_A Heterotetrameric sarcos 99.8 6.7E-21 2.3E-25 203.9 12.7 177 6-210 252-442 (965)
80 3hyw_A Sulfide-quinone reducta 99.8 8.5E-22 2.9E-26 193.3 3.9 196 10-211 111-332 (430)
81 1lqt_A FPRA; NADP+ derivative, 99.8 8.8E-21 3E-25 187.4 9.8 189 7-210 109-385 (456)
82 4a9w_A Monooxygenase; baeyer-v 99.8 1.7E-20 5.9E-25 177.4 9.2 155 40-211 162-351 (357)
83 3k30_A Histamine dehydrogenase 99.8 2.2E-19 7.5E-24 186.1 12.1 174 7-211 496-674 (690)
84 3h28_A Sulfide-quinone reducta 99.8 4E-19 1.4E-23 174.1 12.2 185 20-211 120-332 (430)
85 2xve_A Flavin-containing monoo 99.8 1.2E-18 4.1E-23 172.5 13.3 170 2-211 163-340 (464)
86 1ps9_A 2,4-dienoyl-COA reducta 99.7 3.8E-18 1.3E-22 176.3 11.8 167 6-207 466-671 (671)
87 1y56_A Hypothetical protein PH 99.7 7E-18 2.4E-22 168.2 12.8 154 6-211 218-376 (493)
88 3s5w_A L-ornithine 5-monooxyge 99.7 2.4E-17 8.1E-22 162.6 12.6 160 40-207 226-444 (463)
89 2cul_A Glucose-inhibited divis 99.7 4.7E-17 1.6E-21 146.3 12.9 154 42-209 4-229 (232)
90 2gv8_A Monooxygenase; FMO, FAD 99.7 1.9E-17 6.4E-22 163.0 9.0 170 2-211 174-361 (447)
91 3gwf_A Cyclohexanone monooxyge 99.5 2.9E-14 9.9E-19 143.6 8.5 181 5-208 147-453 (540)
92 1rp0_A ARA6, thiazole biosynth 99.5 1.1E-13 3.6E-18 128.1 10.8 165 42-210 40-273 (284)
93 3uox_A Otemo; baeyer-villiger 99.3 1.4E-12 4.9E-17 131.3 6.4 97 97-208 352-462 (545)
94 1w4x_A Phenylacetone monooxyge 99.3 1.7E-12 5.7E-17 130.8 6.6 97 97-209 352-463 (542)
95 4ap3_A Steroid monooxygenase; 99.3 3.7E-12 1.3E-16 128.4 7.8 65 5-76 159-226 (549)
96 2bry_A NEDD9 interacting prote 99.1 3.8E-11 1.3E-15 119.6 5.2 138 7-144 49-233 (497)
97 4a9w_A Monooxygenase; baeyer-v 99.1 1.4E-09 4.9E-14 102.0 13.4 95 42-139 4-130 (357)
98 3nlc_A Uncharacterized protein 99.0 1.7E-09 5.7E-14 108.7 10.8 101 42-143 108-279 (549)
99 3k7m_X 6-hydroxy-L-nicotine ox 98.9 6.2E-09 2.1E-13 101.0 13.5 80 95-177 216-306 (431)
100 3lzw_A Ferredoxin--NADP reduct 98.9 2.1E-09 7.3E-14 100.0 9.0 100 42-143 8-128 (332)
101 3itj_A Thioredoxin reductase 1 98.9 3.1E-09 1.1E-13 99.2 10.1 102 40-144 21-145 (338)
102 3f8d_A Thioredoxin reductase ( 98.9 5.5E-09 1.9E-13 96.7 11.6 100 42-144 16-128 (323)
103 3gwf_A Cyclohexanone monooxyge 98.9 9.6E-09 3.3E-13 103.2 12.9 102 42-143 9-151 (540)
104 3fbs_A Oxidoreductase; structu 98.9 7.2E-09 2.4E-13 94.9 10.9 100 42-144 3-115 (297)
105 4ap3_A Steroid monooxygenase; 98.9 8E-09 2.7E-13 104.0 12.1 103 41-143 21-163 (549)
106 2zbw_A Thioredoxin reductase; 98.9 9.7E-09 3.3E-13 96.1 11.7 98 41-140 5-120 (335)
107 3v76_A Flavoprotein; structura 98.9 6.6E-09 2.3E-13 101.1 10.7 99 41-142 27-188 (417)
108 3ab1_A Ferredoxin--NADP reduct 98.9 1.3E-08 4.5E-13 96.4 12.5 99 41-140 14-130 (360)
109 3klj_A NAD(FAD)-dependent dehy 98.9 8.2E-09 2.8E-13 99.4 10.8 100 41-144 9-119 (385)
110 4b63_A L-ornithine N5 monooxyg 98.9 5.1E-08 1.8E-12 97.0 16.6 196 6-210 213-485 (501)
111 3alj_A 2-methyl-3-hydroxypyrid 98.8 1.7E-08 5.8E-13 96.5 12.3 98 41-143 11-162 (379)
112 2q0l_A TRXR, thioredoxin reduc 98.8 1.5E-08 5.3E-13 93.7 11.5 98 43-143 3-116 (311)
113 3sx6_A Sulfide-quinone reducta 98.8 3.2E-09 1.1E-13 103.8 6.9 100 42-146 5-117 (437)
114 2xve_A Flavin-containing monoo 98.8 2.4E-08 8.4E-13 98.4 13.0 103 42-144 3-171 (464)
115 4fk1_A Putative thioredoxin re 98.8 1.9E-08 6.4E-13 93.2 11.5 102 42-144 7-120 (304)
116 1fl2_A Alkyl hydroperoxide red 98.8 1.3E-08 4.5E-13 94.1 10.4 101 43-143 3-117 (310)
117 3oz2_A Digeranylgeranylglycero 98.8 7.7E-08 2.6E-12 91.4 15.5 98 43-141 6-162 (397)
118 3d1c_A Flavin-containing putat 98.8 4.7E-08 1.6E-12 92.5 13.7 98 42-142 5-144 (369)
119 3uox_A Otemo; baeyer-villiger 98.8 1.5E-08 5.2E-13 101.9 10.6 103 41-143 9-151 (545)
120 2gqf_A Hypothetical protein HI 98.8 2.9E-08 9.9E-13 96.1 12.1 100 42-143 5-170 (401)
121 1vdc_A NTR, NADPH dependent th 98.8 1.7E-08 5.7E-13 94.3 10.1 99 42-144 9-127 (333)
122 3vrd_B FCCB subunit, flavocyto 98.8 1.2E-08 4E-13 98.3 9.2 101 41-146 2-113 (401)
123 1qo8_A Flavocytochrome C3 fuma 98.8 1.9E-08 6.4E-13 101.7 11.1 134 10-143 88-314 (566)
124 2q7v_A Thioredoxin reductase; 98.8 2.8E-08 9.5E-13 92.7 11.1 102 42-144 9-126 (325)
125 3hyw_A Sulfide-quinone reducta 98.8 1.9E-09 6.4E-14 105.3 3.2 96 42-142 3-110 (430)
126 2i0z_A NAD(FAD)-utilizing dehy 98.8 4.3E-08 1.5E-12 96.1 12.6 100 42-142 27-192 (447)
127 1hyu_A AHPF, alkyl hydroperoxi 98.8 5.9E-08 2E-12 97.0 13.7 104 40-143 211-328 (521)
128 3h8l_A NADH oxidase; membrane 98.7 6.2E-09 2.1E-13 100.7 5.5 98 42-144 2-116 (409)
129 2vou_A 2,6-dihydroxypyridine h 98.7 4.4E-08 1.5E-12 94.3 11.3 101 41-143 5-155 (397)
130 2x3n_A Probable FAD-dependent 98.7 4.1E-08 1.4E-12 94.3 11.1 101 42-143 7-168 (399)
131 1trb_A Thioredoxin reductase; 98.7 4E-08 1.4E-12 91.1 10.6 98 42-143 6-118 (320)
132 3fpz_A Thiazole biosynthetic e 98.7 1.7E-09 5.8E-14 101.5 0.8 43 34-76 58-102 (326)
133 1xhc_A NADH oxidase /nitrite r 98.7 9.5E-09 3.3E-13 98.2 5.9 99 40-144 7-116 (367)
134 3nix_A Flavoprotein/dehydrogen 98.7 5.1E-08 1.7E-12 94.1 10.7 100 42-141 6-166 (421)
135 3cty_A Thioredoxin reductase; 98.7 6.6E-08 2.3E-12 89.8 11.1 99 41-143 16-128 (319)
136 3fg2_P Putative rubredoxin red 98.7 1.9E-08 6.4E-13 97.2 7.5 97 42-143 2-112 (404)
137 2gv8_A Monooxygenase; FMO, FAD 98.7 5.1E-08 1.8E-12 95.4 10.7 103 40-144 5-182 (447)
138 3r9u_A Thioredoxin reductase; 98.7 4.8E-08 1.6E-12 90.1 9.8 99 41-144 4-121 (315)
139 1yvv_A Amine oxidase, flavin-c 98.7 1.5E-07 5.1E-12 87.8 13.1 97 42-141 3-162 (336)
140 4a5l_A Thioredoxin reductase; 98.7 6.5E-08 2.2E-12 89.5 10.4 100 42-144 5-124 (314)
141 2a87_A TRXR, TR, thioredoxin r 98.7 5.9E-08 2E-12 91.0 10.2 100 41-144 14-129 (335)
142 3h28_A Sulfide-quinone reducta 98.7 5.8E-09 2E-13 101.7 3.4 98 42-144 3-112 (430)
143 3ef6_A Toluene 1,2-dioxygenase 98.7 5.3E-08 1.8E-12 94.3 10.2 99 42-144 3-114 (410)
144 1q1r_A Putidaredoxin reductase 98.7 3.6E-08 1.2E-12 96.2 8.6 101 41-145 4-118 (431)
145 3oc4_A Oxidoreductase, pyridin 98.7 3.6E-08 1.2E-12 96.7 8.6 101 42-144 3-118 (452)
146 4gcm_A TRXR, thioredoxin reduc 98.7 1.5E-07 5E-12 87.3 11.9 99 42-144 7-119 (312)
147 1y0p_A Fumarate reductase flav 98.7 1.5E-07 5.2E-12 95.0 12.9 105 42-146 127-323 (571)
148 3ics_A Coenzyme A-disulfide re 98.6 4.2E-08 1.4E-12 99.4 8.5 104 40-144 35-155 (588)
149 3lxd_A FAD-dependent pyridine 98.6 3.5E-08 1.2E-12 95.6 7.6 100 41-144 9-122 (415)
150 3iwa_A FAD-dependent pyridine 98.6 6.4E-08 2.2E-12 95.4 8.8 102 41-144 3-128 (472)
151 3kd9_A Coenzyme A disulfide re 98.6 6.6E-08 2.3E-12 94.7 8.6 100 41-144 3-117 (449)
152 1k0i_A P-hydroxybenzoate hydro 98.6 1.4E-07 4.8E-12 90.4 10.4 101 42-143 3-165 (394)
153 3s5w_A L-ornithine 5-monooxyge 98.6 7.8E-08 2.7E-12 94.3 8.5 102 43-144 32-195 (463)
154 1ryi_A Glycine oxidase; flavop 98.6 2.1E-07 7E-12 88.6 11.2 56 84-142 165-220 (382)
155 3dme_A Conserved exported prot 98.6 3E-07 1E-11 86.5 12.2 56 85-141 152-209 (369)
156 4hb9_A Similarities with proba 98.6 3.8E-07 1.3E-11 87.2 12.7 100 43-143 3-168 (412)
157 2gjc_A Thiazole biosynthetic e 98.6 2E-07 6.9E-12 87.4 10.2 165 41-208 65-321 (326)
158 1w4x_A Phenylacetone monooxyge 98.6 3.8E-07 1.3E-11 91.6 12.8 98 42-139 17-152 (542)
159 3atr_A Conserved archaeal prot 98.6 2.7E-07 9.1E-12 90.4 11.4 101 42-143 7-164 (453)
160 2gag_B Heterotetrameric sarcos 98.6 3.5E-07 1.2E-11 87.6 11.7 55 85-141 176-230 (405)
161 3ces_A MNMG, tRNA uridine 5-ca 98.6 3.3E-07 1.1E-11 93.2 12.0 99 42-142 29-182 (651)
162 1d4d_A Flavocytochrome C fumar 98.5 4.6E-07 1.6E-11 91.6 12.8 120 27-146 110-323 (572)
163 3ntd_A FAD-dependent pyridine 98.5 9.2E-08 3.1E-12 96.3 7.6 102 42-144 2-120 (565)
164 3cgv_A Geranylgeranyl reductas 98.5 3.1E-07 1E-11 87.7 10.9 99 42-141 5-162 (397)
165 1y56_B Sarcosine oxidase; dehy 98.5 5.8E-07 2E-11 85.5 12.6 53 87-141 153-205 (382)
166 2xdo_A TETX2 protein; tetracyc 98.5 4.3E-07 1.5E-11 87.3 11.7 102 40-143 25-184 (398)
167 2zxi_A TRNA uridine 5-carboxym 98.5 4.9E-07 1.7E-11 91.7 12.5 100 42-143 28-182 (637)
168 3rp8_A Flavoprotein monooxygen 98.5 3.3E-07 1.1E-11 88.3 10.7 100 40-143 22-183 (407)
169 2gqw_A Ferredoxin reductase; f 98.5 1.5E-07 5.2E-12 91.1 8.2 101 41-145 7-117 (408)
170 2gmh_A Electron transfer flavo 98.5 8.3E-07 2.8E-11 90.0 13.7 102 42-143 36-219 (584)
171 3i3l_A Alkylhalidase CMLS; fla 98.5 7.3E-07 2.5E-11 90.4 12.9 101 41-142 23-189 (591)
172 3qj4_A Renalase; FAD/NAD(P)-bi 98.5 4.6E-07 1.6E-11 85.1 10.5 95 42-138 2-162 (342)
173 1nhp_A NADH peroxidase; oxidor 98.5 1.6E-07 5.3E-12 92.0 7.3 101 42-144 1-118 (447)
174 3ihg_A RDME; flavoenzyme, anth 98.5 5.2E-07 1.8E-11 90.3 11.2 101 42-142 6-184 (535)
175 2vdc_G Glutamate synthase [NAD 98.5 9.1E-08 3.1E-12 94.1 5.2 90 40-140 121-218 (456)
176 3cp8_A TRNA uridine 5-carboxym 98.5 1.1E-06 3.6E-11 89.4 12.5 101 41-143 21-176 (641)
177 4eqs_A Coenzyme A disulfide re 98.4 4.8E-07 1.7E-11 88.4 9.6 101 43-144 2-119 (437)
178 2uzz_A N-methyl-L-tryptophan o 98.4 9.6E-07 3.3E-11 83.6 11.3 52 86-140 152-203 (372)
179 3e1t_A Halogenase; flavoprotei 98.4 1.7E-06 5.6E-11 86.2 13.1 101 42-143 8-174 (512)
180 2e5v_A L-aspartate oxidase; ar 98.4 5.5E-09 1.9E-13 103.3 -5.1 143 44-209 215-370 (472)
181 3ps9_A TRNA 5-methylaminomethy 98.4 1.8E-06 6.1E-11 88.9 13.5 53 87-141 421-473 (676)
182 3cgb_A Pyridine nucleotide-dis 98.4 3.3E-07 1.1E-11 90.5 7.7 101 42-144 37-155 (480)
183 2cdu_A NADPH oxidase; flavoenz 98.4 2E-07 6.7E-12 91.4 5.9 100 43-144 2-120 (452)
184 3fmw_A Oxygenase; mithramycin, 98.4 6.7E-07 2.3E-11 90.4 9.9 99 42-142 50-208 (570)
185 2gf3_A MSOX, monomeric sarcosi 98.4 2.3E-06 7.9E-11 81.4 12.9 55 85-142 152-206 (389)
186 2qa2_A CABE, polyketide oxygen 98.4 2.6E-06 8.9E-11 84.6 13.6 101 40-142 11-167 (499)
187 2aqj_A Tryptophan halogenase, 98.4 3.2E-06 1.1E-10 84.6 14.4 56 87-143 169-224 (538)
188 4dgk_A Phytoene dehydrogenase; 98.4 1.4E-06 4.7E-11 86.1 11.3 50 90-140 228-277 (501)
189 4g6h_A Rotenone-insensitive NA 98.4 2E-07 6.8E-12 92.8 5.3 100 42-144 43-172 (502)
190 2bc0_A NADH oxidase; flavoprot 98.4 2.9E-07 9.9E-12 91.2 6.4 101 42-144 36-152 (490)
191 2qae_A Lipoamide, dihydrolipoy 98.4 1E-06 3.5E-11 86.7 10.0 98 42-144 3-151 (468)
192 3dje_A Fructosyl amine: oxygen 98.4 2.7E-06 9.3E-11 82.5 12.6 54 86-140 164-220 (438)
193 2qa1_A PGAE, polyketide oxygen 98.4 2.9E-06 1E-10 84.3 13.1 101 40-142 10-166 (500)
194 3l8k_A Dihydrolipoyl dehydroge 98.4 1.2E-06 4E-11 86.2 10.1 98 42-144 5-147 (466)
195 3c96_A Flavin-containing monoo 98.4 1.3E-06 4.3E-11 84.4 9.9 100 41-143 4-171 (410)
196 1dxl_A Dihydrolipoamide dehydr 98.4 7.8E-07 2.7E-11 87.5 8.5 99 41-144 6-154 (470)
197 3nyc_A D-arginine dehydrogenas 98.3 1.7E-06 5.9E-11 81.8 10.4 51 88-141 159-209 (381)
198 1ebd_A E3BD, dihydrolipoamide 98.3 1.3E-06 4.6E-11 85.5 9.4 97 42-144 4-148 (455)
199 4at0_A 3-ketosteroid-delta4-5a 98.3 4.7E-06 1.6E-10 82.9 13.4 64 84-147 203-271 (510)
200 1zk7_A HGII, reductase, mercur 98.3 1.6E-06 5.4E-11 85.2 9.8 99 41-144 4-153 (467)
201 1mo9_A ORF3; nucleotide bindin 98.3 1.5E-06 5.1E-11 86.8 9.6 96 42-144 44-189 (523)
202 3pvc_A TRNA 5-methylaminomethy 98.3 4.2E-06 1.4E-10 86.4 13.2 51 89-141 418-469 (689)
203 1y56_A Hypothetical protein PH 98.3 6.6E-07 2.2E-11 88.8 6.6 100 42-144 109-222 (493)
204 2e4g_A Tryptophan halogenase; 98.3 5.7E-06 1.9E-10 83.1 13.5 55 88-143 199-254 (550)
205 1m6i_A Programmed cell death p 98.3 3.6E-07 1.2E-11 90.7 4.5 99 41-143 11-146 (493)
206 1v59_A Dihydrolipoamide dehydr 98.3 2.7E-06 9.1E-11 83.8 10.6 96 42-142 6-158 (478)
207 3jsk_A Cypbp37 protein; octame 98.3 4.8E-06 1.7E-10 78.5 11.6 166 41-209 79-332 (344)
208 3ka7_A Oxidoreductase; structu 98.3 7E-06 2.4E-10 79.1 13.1 55 90-146 203-257 (425)
209 3urh_A Dihydrolipoyl dehydroge 98.3 6.1E-06 2.1E-10 81.6 12.8 97 41-142 25-171 (491)
210 1zmd_A Dihydrolipoyl dehydroge 98.3 2.4E-06 8.1E-11 84.2 9.5 98 42-144 7-155 (474)
211 2yqu_A 2-oxoglutarate dehydrog 98.3 1.6E-06 5.5E-11 84.9 8.2 96 43-144 3-144 (455)
212 2oln_A NIKD protein; flavoprot 98.2 8.5E-06 2.9E-10 77.9 13.0 49 89-140 159-207 (397)
213 3o0h_A Glutathione reductase; 98.2 1.9E-06 6.4E-11 85.2 8.4 93 42-142 27-167 (484)
214 2v3a_A Rubredoxin reductase; a 98.2 1.5E-06 5.1E-11 83.2 7.3 99 41-144 4-116 (384)
215 2gag_A Heterotetrameric sarcos 98.2 3E-06 1E-10 90.7 10.2 100 42-143 129-255 (965)
216 2r9z_A Glutathione amide reduc 98.2 1.9E-06 6.6E-11 84.7 8.1 95 41-144 4-145 (463)
217 1xdi_A RV3303C-LPDA; reductase 98.2 4.4E-06 1.5E-10 82.9 10.7 101 42-144 3-159 (499)
218 1gte_A Dihydropyrimidine dehyd 98.2 4.8E-07 1.6E-11 97.4 4.0 94 41-143 187-290 (1025)
219 1lvl_A Dihydrolipoamide dehydr 98.2 4E-06 1.4E-10 82.2 10.2 93 42-143 6-148 (458)
220 2pyx_A Tryptophan halogenase; 98.2 1.2E-05 4.2E-10 80.1 13.8 55 88-143 180-235 (526)
221 2hqm_A GR, grase, glutathione 98.2 4.2E-06 1.4E-10 82.6 10.3 97 42-144 12-163 (479)
222 1cjc_A Protein (adrenodoxin re 98.2 3.3E-07 1.1E-11 90.2 2.3 91 40-141 5-106 (460)
223 2a8x_A Dihydrolipoyl dehydroge 98.2 4.5E-06 1.6E-10 81.9 10.3 97 42-144 4-149 (464)
224 1onf_A GR, grase, glutathione 98.2 1.5E-06 5.2E-11 86.2 6.9 95 42-144 3-156 (500)
225 3c4n_A Uncharacterized protein 98.2 2.2E-06 7.4E-11 82.7 7.8 97 42-141 37-236 (405)
226 3nrn_A Uncharacterized protein 98.2 1.1E-05 3.7E-10 77.9 12.5 53 90-146 196-248 (421)
227 1ges_A Glutathione reductase; 98.2 4.3E-06 1.5E-10 81.8 9.7 94 42-144 5-146 (450)
228 1ojt_A Surface protein; redox- 98.2 3.9E-06 1.3E-10 82.9 9.3 97 42-143 7-162 (482)
229 2eq6_A Pyruvate dehydrogenase 98.2 4.7E-06 1.6E-10 81.9 9.6 94 42-144 7-146 (464)
230 1ps9_A 2,4-dienoyl-COA reducta 98.2 1.8E-06 6.1E-11 88.9 6.8 87 41-144 373-470 (671)
231 3k30_A Histamine dehydrogenase 98.2 7.5E-07 2.6E-11 92.0 3.9 89 40-142 390-489 (690)
232 2weu_A Tryptophan 5-halogenase 98.2 1.1E-05 3.6E-10 80.1 12.1 56 87-143 177-232 (511)
233 1lqt_A FPRA; NADP+ derivative, 98.2 6.3E-07 2.1E-11 88.1 3.1 89 41-140 3-107 (456)
234 1pj5_A N,N-dimethylglycine oxi 98.2 8.8E-06 3E-10 85.7 11.8 54 86-141 154-207 (830)
235 4dna_A Probable glutathione re 98.1 2E-06 6.9E-11 84.4 6.1 93 42-142 6-146 (463)
236 2e5v_A L-aspartate oxidase; ar 98.1 1.5E-05 5.3E-10 78.5 11.6 98 43-142 1-177 (472)
237 1fec_A Trypanothione reductase 98.1 3.6E-06 1.2E-10 83.4 7.0 98 42-144 4-166 (490)
238 2qcu_A Aerobic glycerol-3-phos 98.1 2.3E-05 7.9E-10 77.7 12.5 55 85-141 151-210 (501)
239 2wpf_A Trypanothione reductase 98.1 3.3E-06 1.1E-10 83.7 6.1 96 42-144 8-170 (495)
240 3lad_A Dihydrolipoamide dehydr 98.1 1E-05 3.5E-10 79.5 9.6 97 42-143 4-156 (476)
241 3dk9_A Grase, GR, glutathione 98.0 6.4E-06 2.2E-10 81.1 7.4 97 41-144 20-163 (478)
242 3qfa_A Thioredoxin reductase 1 98.0 1.6E-05 5.5E-10 79.3 10.3 98 42-144 33-188 (519)
243 3c4a_A Probable tryptophan hyd 98.0 2.8E-06 9.5E-11 81.1 4.3 88 42-142 1-144 (381)
244 3da1_A Glycerol-3-phosphate de 98.0 2.2E-05 7.5E-10 79.1 10.7 52 88-140 175-231 (561)
245 3axb_A Putative oxidoreductase 98.0 1.7E-05 5.9E-10 77.1 9.7 53 87-140 185-253 (448)
246 1o94_A Tmadh, trimethylamine d 98.0 2.2E-06 7.4E-11 89.1 3.4 88 41-142 389-492 (729)
247 2dkh_A 3-hydroxybenzoate hydro 98.0 2.5E-05 8.6E-10 79.9 10.5 102 42-143 33-213 (639)
248 2r0c_A REBC; flavin adenine di 97.9 3.3E-05 1.1E-09 77.5 10.6 97 42-143 27-198 (549)
249 3dgz_A Thioredoxin reductase 2 97.9 7E-05 2.4E-09 73.9 12.6 98 42-144 7-162 (488)
250 1kf6_A Fumarate reductase flav 97.9 5.8E-05 2E-09 76.6 11.6 98 42-140 6-196 (602)
251 3dgh_A TRXR-1, thioredoxin red 97.9 7E-05 2.4E-09 73.8 11.8 99 41-144 9-165 (483)
252 2wdq_A Succinate dehydrogenase 97.9 0.00011 3.9E-09 74.3 13.5 52 89-140 149-205 (588)
253 4gut_A Lysine-specific histone 97.8 8E-05 2.7E-09 77.7 11.8 63 14-76 288-371 (776)
254 2rgh_A Alpha-glycerophosphate 97.8 0.00011 3.6E-09 74.2 11.9 34 41-74 32-65 (571)
255 2x8g_A Thioredoxin glutathione 97.8 0.00011 3.9E-09 74.3 11.5 99 41-144 107-264 (598)
256 1chu_A Protein (L-aspartate ox 97.7 0.00018 6.1E-09 72.1 12.1 33 42-75 9-41 (540)
257 3ic9_A Dihydrolipoamide dehydr 97.7 4E-05 1.4E-09 75.9 6.9 33 42-74 9-41 (492)
258 3i6d_A Protoporphyrinogen oxid 97.7 0.00017 6E-09 70.0 10.7 40 98-139 248-287 (470)
259 3kkj_A Amine oxidase, flavin-c 97.6 4.5E-05 1.5E-09 66.9 5.0 34 43-76 4-37 (336)
260 2h88_A Succinate dehydrogenase 97.6 0.00029 1E-08 71.7 11.6 32 43-74 20-51 (621)
261 1pn0_A Phenol 2-monooxygenase; 97.6 0.00028 9.7E-09 72.4 11.3 33 42-74 9-46 (665)
262 2bs2_A Quinol-fumarate reducta 97.5 0.00056 1.9E-08 70.1 12.1 33 42-74 6-38 (660)
263 3pl8_A Pyranose 2-oxidase; sub 97.5 0.00025 8.6E-09 72.2 8.7 52 97-148 274-331 (623)
264 1jnr_A Adenylylsulfate reducta 97.3 0.001 3.4E-08 68.0 11.4 33 42-74 23-59 (643)
265 4b1b_A TRXR, thioredoxin reduc 97.3 0.0012 4E-08 66.1 10.6 31 43-73 44-74 (542)
266 4b63_A L-ornithine N5 monooxyg 97.2 0.0018 6.1E-08 64.1 10.6 102 43-144 41-217 (501)
267 2iid_A L-amino-acid oxidase; f 97.1 0.00054 1.9E-08 67.4 5.8 74 28-101 15-110 (498)
268 3gyx_A Adenylylsulfate reducta 97.0 0.0016 5.6E-08 66.6 8.7 32 42-73 23-60 (662)
269 3dfz_A SIRC, precorrin-2 dehyd 96.9 0.0044 1.5E-07 54.6 9.2 109 39-178 29-142 (223)
270 3lk7_A UDP-N-acetylmuramoylala 96.8 0.0014 4.9E-08 63.9 6.6 83 40-147 8-90 (451)
271 3eag_A UDP-N-acetylmuramate:L- 96.8 0.0025 8.5E-08 59.5 7.2 81 40-147 3-84 (326)
272 3ihm_A Styrene monooxygenase A 96.6 0.0014 4.9E-08 63.3 4.9 33 42-74 23-55 (430)
273 2b9w_A Putative aminooxidase; 96.6 0.0022 7.5E-08 61.5 5.7 37 40-76 5-42 (424)
274 3nks_A Protoporphyrinogen oxid 96.5 0.0021 7.1E-08 62.6 4.9 35 42-76 3-39 (477)
275 4gde_A UDP-galactopyranose mut 96.5 0.0019 6.6E-08 63.4 4.5 36 42-77 11-47 (513)
276 2e1m_A L-glutamate oxidase; L- 96.4 0.0032 1.1E-07 60.0 5.6 37 40-76 43-80 (376)
277 2jae_A L-amino acid oxidase; o 96.4 0.0032 1.1E-07 61.6 5.7 39 40-78 10-48 (489)
278 1s3e_A Amine oxidase [flavin-c 96.4 0.0031 1.1E-07 62.4 5.5 36 41-76 4-39 (520)
279 3g5s_A Methylenetetrahydrofola 96.4 0.0035 1.2E-07 60.0 5.5 33 42-74 2-34 (443)
280 1c0p_A D-amino acid oxidase; a 96.3 0.0031 1.1E-07 59.1 5.0 34 41-74 6-39 (363)
281 1rsg_A FMS1 protein; FAD bindi 96.3 0.0032 1.1E-07 62.3 5.3 37 41-77 8-45 (516)
282 2ivd_A PPO, PPOX, protoporphyr 96.3 0.0036 1.2E-07 61.0 5.3 38 40-77 15-52 (478)
283 2bcg_G Secretory pathway GDP d 96.3 0.0036 1.2E-07 61.0 5.1 39 41-79 11-49 (453)
284 1sez_A Protoporphyrinogen oxid 96.2 0.0047 1.6E-07 60.6 5.4 37 41-77 13-49 (504)
285 2vvm_A Monoamine oxidase N; FA 96.1 0.0048 1.6E-07 60.5 5.3 37 41-77 39-75 (495)
286 2yg5_A Putrescine oxidase; oxi 96.1 0.0049 1.7E-07 59.6 5.3 60 42-102 6-81 (453)
287 3g3e_A D-amino-acid oxidase; F 96.0 0.0037 1.3E-07 58.3 3.7 32 43-74 2-39 (351)
288 2bi7_A UDP-galactopyranose mut 96.0 0.0059 2E-07 58.2 5.0 36 42-77 4-39 (384)
289 2g1u_A Hypothetical protein TM 95.9 0.0099 3.4E-07 48.8 5.3 36 40-75 18-53 (155)
290 1v0j_A UDP-galactopyranose mut 95.9 0.0067 2.3E-07 58.0 4.8 37 41-77 7-44 (399)
291 3hdq_A UDP-galactopyranose mut 95.8 0.0073 2.5E-07 57.9 5.0 37 41-77 29-65 (397)
292 3lov_A Protoporphyrinogen oxid 95.8 0.0065 2.2E-07 59.1 4.4 35 42-76 5-41 (475)
293 2z3y_A Lysine-specific histone 95.8 0.0094 3.2E-07 61.0 5.7 39 40-78 106-144 (662)
294 1i8t_A UDP-galactopyranose mut 95.8 0.0077 2.6E-07 56.9 4.7 35 43-77 3-37 (367)
295 2xag_A Lysine-specific histone 95.7 0.011 3.7E-07 62.3 5.7 39 40-78 277-315 (852)
296 3p1w_A Rabgdi protein; GDI RAB 95.6 0.024 8E-07 55.6 7.6 58 83-140 256-313 (475)
297 3i83_A 2-dehydropantoate 2-red 95.5 0.034 1.2E-06 51.4 8.1 84 42-147 3-89 (320)
298 2x5o_A UDP-N-acetylmuramoylala 95.5 0.0065 2.2E-07 59.0 3.2 78 40-146 4-81 (439)
299 4dsg_A UDP-galactopyranose mut 95.5 0.014 4.6E-07 57.4 5.6 37 40-76 8-45 (484)
300 1id1_A Putative potassium chan 95.5 0.018 6.3E-07 46.9 5.5 33 41-73 3-35 (153)
301 4hv4_A UDP-N-acetylmuramate--L 95.3 0.015 5.2E-07 57.3 5.3 77 40-146 21-98 (494)
302 3llv_A Exopolyphosphatase-rela 95.3 0.017 5.8E-07 46.4 4.4 33 41-73 6-38 (141)
303 1lss_A TRK system potassium up 95.2 0.019 6.4E-07 45.6 4.4 33 41-73 4-36 (140)
304 3fwz_A Inner membrane protein 95.1 0.019 6.6E-07 46.2 4.4 77 41-141 7-83 (140)
305 1d5t_A Guanine nucleotide diss 95.0 0.024 8.1E-07 54.8 5.4 37 41-77 6-42 (433)
306 2hmt_A YUAA protein; RCK, KTN, 95.0 0.024 8.2E-07 45.1 4.6 34 40-73 5-38 (144)
307 3ic5_A Putative saccharopine d 95.0 0.018 6.2E-07 44.2 3.7 33 41-73 5-38 (118)
308 1b37_A Protein (polyamine oxid 94.9 0.025 8.6E-07 55.0 5.5 38 41-78 4-42 (472)
309 3p1w_A Rabgdi protein; GDI RAB 94.7 0.026 8.9E-07 55.3 5.0 37 42-78 21-57 (475)
310 1kyq_A Met8P, siroheme biosynt 94.7 0.025 8.7E-07 51.2 4.5 34 40-73 12-45 (274)
311 3hn2_A 2-dehydropantoate 2-red 94.7 0.043 1.5E-06 50.5 6.1 84 42-147 3-87 (312)
312 3ghy_A Ketopantoate reductase 94.4 0.05 1.7E-06 50.6 5.9 76 42-139 4-80 (335)
313 3ado_A Lambda-crystallin; L-gu 94.2 0.035 1.2E-06 51.5 4.2 37 40-76 5-41 (319)
314 3c85_A Putative glutathione-re 94.2 0.036 1.2E-06 46.6 4.0 33 41-73 39-72 (183)
315 3hn7_A UDP-N-acetylmuramate-L- 94.2 0.08 2.7E-06 52.5 7.1 80 40-147 18-98 (524)
316 3hwr_A 2-dehydropantoate 2-red 94.1 0.053 1.8E-06 50.1 5.4 33 40-73 18-50 (318)
317 3ayj_A Pro-enzyme of L-phenyla 94.0 0.021 7.2E-07 58.7 2.5 35 42-76 57-100 (721)
318 2vvm_A Monoamine oxidase N; FA 93.8 0.12 4.1E-06 50.3 7.6 55 83-139 255-310 (495)
319 3ojo_A CAP5O; rossmann fold, c 93.5 0.3 1E-05 47.1 9.6 35 40-74 10-44 (431)
320 4e12_A Diketoreductase; oxidor 93.4 0.057 1.9E-06 49.0 4.0 35 41-75 4-38 (283)
321 4ezb_A Uncharacterized conserv 93.3 0.23 7.8E-06 45.8 8.1 35 41-75 24-59 (317)
322 1kdg_A CDH, cellobiose dehydro 93.2 0.075 2.5E-06 52.8 4.9 33 42-74 8-40 (546)
323 1kf6_A Fumarate reductase flav 93.0 0.076 2.6E-06 53.6 4.7 54 153-209 358-413 (602)
324 3e8x_A Putative NAD-dependent 92.9 0.11 3.7E-06 45.3 5.0 36 40-75 20-56 (236)
325 3oj0_A Glutr, glutamyl-tRNA re 92.9 0.049 1.7E-06 43.9 2.6 34 40-73 20-53 (144)
326 3qsg_A NAD-binding phosphogluc 92.8 0.16 5.4E-06 46.7 6.2 34 41-74 24-58 (312)
327 3l4b_C TRKA K+ channel protien 92.8 0.08 2.7E-06 45.8 3.9 31 43-73 2-32 (218)
328 3phh_A Shikimate dehydrogenase 92.8 0.17 6E-06 45.6 6.2 47 28-74 105-151 (269)
329 3gpi_A NAD-dependent epimerase 92.5 0.15 5.1E-06 45.7 5.6 35 41-75 3-37 (286)
330 4dio_A NAD(P) transhydrogenase 92.1 0.16 5.4E-06 48.6 5.3 35 40-74 189-223 (405)
331 3p2y_A Alanine dehydrogenase/p 92.1 0.12 4E-06 49.0 4.3 35 40-74 183-217 (381)
332 3t37_A Probable dehydrogenase; 92.0 0.11 3.7E-06 51.1 4.2 34 42-75 18-52 (526)
333 1d5t_A Guanine nucleotide diss 91.9 0.13 4.6E-06 49.4 4.7 58 83-142 234-291 (433)
334 2bcg_G Secretory pathway GDP d 91.8 0.24 8.3E-06 47.8 6.4 59 83-142 242-301 (453)
335 1pjq_A CYSG, siroheme synthase 91.8 0.15 5.3E-06 49.5 5.0 34 40-73 11-44 (457)
336 4b4o_A Epimerase family protei 91.7 0.18 6E-06 45.5 5.0 33 43-75 2-35 (298)
337 1n4w_A CHOD, cholesterol oxida 91.6 0.17 6E-06 49.7 5.2 34 42-75 6-39 (504)
338 1x13_A NAD(P) transhydrogenase 91.6 0.18 6E-06 48.3 5.0 35 40-74 171-205 (401)
339 3ius_A Uncharacterized conserv 91.5 0.16 5.4E-06 45.4 4.5 33 42-74 6-38 (286)
340 4ffl_A PYLC; amino acid, biosy 91.5 0.19 6.4E-06 47.0 5.2 33 42-74 2-34 (363)
341 2raf_A Putative dinucleotide-b 91.5 0.21 7E-06 43.1 4.9 36 40-75 18-53 (209)
342 3ngx_A Bifunctional protein fo 91.4 0.31 1.1E-05 44.0 6.1 48 25-73 135-183 (276)
343 1ju2_A HydroxynitrIle lyase; f 91.4 0.11 3.6E-06 51.7 3.4 33 42-75 27-59 (536)
344 1hdo_A Biliverdin IX beta redu 91.4 0.21 7.2E-06 41.9 4.9 34 42-75 4-38 (206)
345 1l7d_A Nicotinamide nucleotide 91.4 0.21 7.1E-06 47.4 5.3 35 40-74 171-205 (384)
346 3rkr_A Short chain oxidoreduct 91.3 0.53 1.8E-05 41.6 7.8 55 36-99 24-79 (262)
347 1f0y_A HCDH, L-3-hydroxyacyl-C 91.3 0.19 6.5E-06 45.8 4.8 35 41-75 15-49 (302)
348 2eez_A Alanine dehydrogenase; 91.3 0.18 6E-06 47.6 4.7 34 40-73 165-198 (369)
349 1jw9_B Molybdopterin biosynthe 91.2 0.17 5.7E-06 45.0 4.2 34 41-74 31-65 (249)
350 2dpo_A L-gulonate 3-dehydrogen 91.1 0.17 5.8E-06 46.8 4.3 35 41-75 6-40 (319)
351 1nyt_A Shikimate 5-dehydrogena 91.1 0.35 1.2E-05 43.4 6.3 46 28-73 102-151 (271)
352 4id9_A Short-chain dehydrogena 91.1 0.22 7.7E-06 45.8 5.1 35 40-74 18-53 (347)
353 2bs2_A Quinol-fumarate reducta 91.0 0.18 6.2E-06 51.4 4.7 55 84-139 159-218 (660)
354 3nks_A Protoporphyrinogen oxid 90.9 0.35 1.2E-05 46.6 6.6 54 84-139 235-288 (477)
355 1chu_A Protein (L-aspartate ox 90.9 0.18 6.2E-06 50.1 4.5 56 84-139 139-206 (540)
356 1ks9_A KPA reductase;, 2-dehyd 90.9 0.23 8E-06 44.5 4.9 33 43-75 2-34 (291)
357 1coy_A Cholesterol oxidase; ox 90.8 0.22 7.5E-06 49.0 5.0 34 42-75 12-45 (507)
358 3ruf_A WBGU; rossmann fold, UD 90.8 0.47 1.6E-05 43.6 7.1 36 40-75 24-60 (351)
359 1vg0_A RAB proteins geranylger 90.8 0.71 2.4E-05 46.8 8.7 61 82-142 377-438 (650)
360 3i6i_A Putative leucoanthocyan 90.7 0.84 2.9E-05 42.0 8.7 56 41-102 10-66 (346)
361 3kkj_A Amine oxidase, flavin-c 90.6 0.19 6.3E-06 43.1 3.9 40 161-211 288-327 (336)
362 1lu9_A Methylene tetrahydromet 90.5 0.55 1.9E-05 42.4 7.0 34 40-73 118-152 (287)
363 2vhw_A Alanine dehydrogenase; 90.4 0.29 9.8E-06 46.3 5.3 34 40-73 167-200 (377)
364 3ew7_A LMO0794 protein; Q8Y8U8 90.4 0.29 1E-05 41.6 4.9 32 43-74 2-34 (221)
365 2rir_A Dipicolinate synthase, 90.4 0.31 1.1E-05 44.4 5.3 35 39-73 155-189 (300)
366 3ond_A Adenosylhomocysteinase; 90.4 0.22 7.6E-06 48.7 4.5 35 39-73 263-297 (488)
367 1p77_A Shikimate 5-dehydrogena 90.4 0.38 1.3E-05 43.2 5.8 46 28-73 102-151 (272)
368 3d4o_A Dipicolinate synthase s 90.4 0.32 1.1E-05 44.2 5.4 35 39-73 153-187 (293)
369 3pgx_A Carveol dehydrogenase; 90.4 1.2 4E-05 39.8 9.2 61 39-99 13-78 (280)
370 3gyx_A Adenylylsulfate reducta 90.3 0.15 5E-06 52.1 3.3 55 84-138 167-230 (662)
371 3vps_A TUNA, NAD-dependent epi 90.3 0.31 1E-05 44.1 5.2 36 40-75 6-42 (321)
372 4g65_A TRK system potassium up 90.3 0.36 1.2E-05 47.0 5.9 100 18-140 210-311 (461)
373 3uve_A Carveol dehydrogenase ( 90.2 1.2 4.2E-05 39.7 9.2 59 40-98 10-76 (286)
374 4a7p_A UDP-glucose dehydrogena 90.2 0.62 2.1E-05 45.1 7.5 61 41-101 8-75 (446)
375 3vtf_A UDP-glucose 6-dehydroge 90.2 0.31 1.1E-05 47.1 5.3 59 42-100 22-87 (444)
376 3jyo_A Quinate/shikimate dehyd 90.2 0.47 1.6E-05 43.0 6.3 46 28-73 110-160 (283)
377 3q2o_A Phosphoribosylaminoimid 90.1 0.32 1.1E-05 46.0 5.3 35 40-74 13-47 (389)
378 1a4i_A Methylenetetrahydrofola 90.1 0.37 1.3E-05 44.0 5.4 48 25-72 148-197 (301)
379 2z1m_A GDP-D-mannose dehydrata 90.1 0.31 1.1E-05 44.5 5.2 35 41-75 3-38 (345)
380 3ksu_A 3-oxoacyl-acyl carrier 90.1 0.84 2.9E-05 40.4 7.9 55 40-100 10-65 (262)
381 3dtt_A NADP oxidoreductase; st 90.1 0.27 9.3E-06 43.3 4.6 36 40-75 18-53 (245)
382 1b0a_A Protein (fold bifunctio 90.1 0.45 1.5E-05 43.2 5.9 49 25-73 142-192 (288)
383 3tnl_A Shikimate dehydrogenase 90.0 0.59 2E-05 43.1 6.8 47 28-74 137-188 (315)
384 4iin_A 3-ketoacyl-acyl carrier 90.0 0.77 2.6E-05 40.8 7.5 51 40-98 28-79 (271)
385 1pjc_A Protein (L-alanine dehy 90.0 0.33 1.1E-05 45.5 5.3 34 40-73 166-199 (361)
386 1zej_A HBD-9, 3-hydroxyacyl-CO 90.0 0.23 8E-06 45.3 4.1 34 40-74 11-44 (293)
387 3sx2_A Putative 3-ketoacyl-(ac 89.7 1.2 4E-05 39.7 8.5 58 40-97 12-73 (278)
388 3qiv_A Short-chain dehydrogena 89.6 1.3 4.4E-05 38.7 8.6 34 40-73 8-42 (253)
389 3dhn_A NAD-dependent epimerase 89.6 0.3 1E-05 41.9 4.3 36 42-77 5-41 (227)
390 3pef_A 6-phosphogluconate dehy 89.5 0.35 1.2E-05 43.6 4.9 34 42-75 2-35 (287)
391 3gvp_A Adenosylhomocysteinase 89.5 0.29 1E-05 47.0 4.5 35 40-74 219-253 (435)
392 4a5o_A Bifunctional protein fo 89.5 0.34 1.2E-05 43.9 4.7 35 39-73 159-194 (286)
393 4e4t_A Phosphoribosylaminoimid 89.5 0.37 1.3E-05 46.2 5.3 35 40-74 34-68 (419)
394 2gk4_A Conserved hypothetical 89.4 0.52 1.8E-05 41.4 5.7 37 40-76 2-55 (232)
395 2dkn_A 3-alpha-hydroxysteroid 89.4 0.41 1.4E-05 41.6 5.2 34 42-75 2-36 (255)
396 1gpe_A Protein (glucose oxidas 89.4 0.33 1.1E-05 48.7 5.0 35 42-76 25-60 (587)
397 2jbv_A Choline oxidase; alcoho 89.3 0.28 9.7E-06 48.7 4.5 34 42-75 14-48 (546)
398 1edz_A 5,10-methylenetetrahydr 89.3 0.48 1.6E-05 43.8 5.6 49 25-73 151-210 (320)
399 2ew2_A 2-dehydropantoate 2-red 89.3 0.28 9.5E-06 44.5 4.1 32 42-73 4-35 (316)
400 3q9t_A Choline dehydrogenase a 89.3 0.29 9.8E-06 49.1 4.5 33 43-75 8-41 (577)
401 3h2s_A Putative NADH-flavin re 89.3 0.39 1.3E-05 41.0 4.8 32 43-74 2-34 (224)
402 3t4e_A Quinate/shikimate dehyd 89.3 0.78 2.7E-05 42.2 7.1 47 28-74 131-182 (312)
403 2c2x_A Methylenetetrahydrofola 89.3 0.47 1.6E-05 42.9 5.4 49 25-73 141-193 (281)
404 2vns_A Metalloreductase steap3 89.2 0.44 1.5E-05 41.1 5.1 33 41-73 28-60 (215)
405 3don_A Shikimate dehydrogenase 89.2 0.35 1.2E-05 43.8 4.5 36 40-75 116-152 (277)
406 3orq_A N5-carboxyaminoimidazol 89.2 0.43 1.5E-05 44.9 5.4 35 40-74 11-45 (377)
407 1y1p_A ARII, aldehyde reductas 89.1 0.42 1.4E-05 43.5 5.2 34 40-73 10-44 (342)
408 1u7z_A Coenzyme A biosynthesis 89.1 0.48 1.6E-05 41.5 5.3 35 40-74 7-58 (226)
409 1vg0_A RAB proteins geranylger 89.1 0.42 1.4E-05 48.5 5.5 54 42-96 9-62 (650)
410 3n58_A Adenosylhomocysteinase; 89.1 0.33 1.1E-05 46.9 4.5 36 39-74 245-280 (464)
411 3o8q_A Shikimate 5-dehydrogena 89.1 0.74 2.5E-05 41.7 6.7 46 28-73 109-159 (281)
412 1nvt_A Shikimate 5'-dehydrogen 89.1 0.54 1.8E-05 42.5 5.8 45 28-73 111-159 (287)
413 3g17_A Similar to 2-dehydropan 89.1 0.28 9.7E-06 44.5 3.9 34 42-75 3-36 (294)
414 4a26_A Putative C-1-tetrahydro 89.1 0.44 1.5E-05 43.5 5.1 49 25-73 148-198 (300)
415 2pzm_A Putative nucleotide sug 89.0 0.43 1.5E-05 43.7 5.2 35 40-74 19-54 (330)
416 4g65_A TRK system potassium up 89.0 0.4 1.4E-05 46.7 5.1 32 42-73 4-35 (461)
417 3pxx_A Carveol dehydrogenase; 89.0 1.7 5.8E-05 38.6 9.1 59 40-98 9-71 (287)
418 3pp8_A Glyoxylate/hydroxypyruv 88.9 0.51 1.7E-05 43.5 5.6 37 40-76 138-174 (315)
419 3ce6_A Adenosylhomocysteinase; 88.9 0.33 1.1E-05 47.6 4.5 35 39-73 272-306 (494)
420 3l9w_A Glutathione-regulated p 88.8 0.36 1.2E-05 46.3 4.6 50 41-103 4-53 (413)
421 2ydy_A Methionine adenosyltran 88.8 0.4 1.4E-05 43.4 4.7 34 41-74 2-36 (315)
422 2dbq_A Glyoxylate reductase; D 88.7 0.51 1.8E-05 43.8 5.5 35 40-74 149-183 (334)
423 3oig_A Enoyl-[acyl-carrier-pro 88.6 0.49 1.7E-05 41.9 5.1 35 40-74 6-43 (266)
424 1cyd_A Carbonyl reductase; sho 88.6 0.52 1.8E-05 40.9 5.2 34 40-73 6-40 (244)
425 2egg_A AROE, shikimate 5-dehyd 88.6 0.44 1.5E-05 43.4 4.9 35 39-73 139-174 (297)
426 3fbt_A Chorismate mutase and s 88.6 0.68 2.3E-05 41.9 6.1 46 28-73 105-155 (282)
427 1bg6_A N-(1-D-carboxylethyl)-L 88.6 0.34 1.2E-05 44.9 4.2 32 42-73 5-36 (359)
428 3ijr_A Oxidoreductase, short c 88.6 1.4 5E-05 39.5 8.4 51 40-98 46-97 (291)
429 3d3w_A L-xylulose reductase; u 88.6 0.53 1.8E-05 40.9 5.2 34 40-73 6-40 (244)
430 3o38_A Short chain dehydrogena 88.6 0.34 1.2E-05 42.9 4.1 34 40-73 21-56 (266)
431 3s55_A Putative short-chain de 88.5 1.9 6.6E-05 38.3 9.1 59 40-98 9-71 (281)
432 1leh_A Leucine dehydrogenase; 88.5 0.5 1.7E-05 44.5 5.3 35 38-72 170-204 (364)
433 3p2o_A Bifunctional protein fo 88.4 0.45 1.5E-05 43.1 4.6 48 26-73 144-193 (285)
434 4gx0_A TRKA domain protein; me 88.4 0.49 1.7E-05 47.1 5.4 59 20-78 326-385 (565)
435 3tsc_A Putative oxidoreductase 88.3 2.1 7E-05 38.1 9.1 59 40-98 10-73 (277)
436 2aef_A Calcium-gated potassium 88.3 0.21 7.2E-06 43.5 2.4 33 41-74 9-41 (234)
437 3doj_A AT3G25530, dehydrogenas 88.3 0.45 1.5E-05 43.5 4.7 35 41-75 21-55 (310)
438 2x6t_A ADP-L-glycero-D-manno-h 88.2 0.49 1.7E-05 43.7 5.1 36 40-75 45-82 (357)
439 1lld_A L-lactate dehydrogenase 88.2 0.5 1.7E-05 43.2 5.0 33 41-73 7-41 (319)
440 3lyl_A 3-oxoacyl-(acyl-carrier 88.2 1.3 4.3E-05 38.6 7.5 50 40-98 4-54 (247)
441 3k6j_A Protein F01G10.3, confi 88.1 0.37 1.3E-05 46.8 4.2 35 41-75 54-88 (460)
442 1o5i_A 3-oxoacyl-(acyl carrier 88.1 0.62 2.1E-05 40.9 5.4 36 39-74 17-53 (249)
443 3ko8_A NAD-dependent epimerase 88.0 0.52 1.8E-05 42.5 5.0 34 42-75 1-35 (312)
444 1s3e_A Amine oxidase [flavin-c 88.0 0.54 1.8E-05 46.1 5.4 49 90-140 219-267 (520)
445 3nrc_A Enoyl-[acyl-carrier-pro 88.0 0.48 1.6E-05 42.4 4.7 36 39-74 24-62 (280)
446 4fn4_A Short chain dehydrogena 87.9 1.6 5.5E-05 38.8 8.0 54 39-101 5-59 (254)
447 3h9u_A Adenosylhomocysteinase; 87.9 0.43 1.5E-05 45.9 4.5 35 40-74 210-244 (436)
448 3l07_A Bifunctional protein fo 87.9 0.5 1.7E-05 42.8 4.6 35 39-73 159-194 (285)
449 3qvp_A Glucose oxidase; oxidor 87.9 0.4 1.4E-05 48.1 4.5 33 42-74 20-53 (583)
450 3t7c_A Carveol dehydrogenase; 87.8 2.2 7.6E-05 38.4 9.2 59 40-98 27-89 (299)
451 2i6u_A Otcase, ornithine carba 87.8 3 0.0001 38.1 9.9 79 18-100 125-205 (307)
452 3pwz_A Shikimate dehydrogenase 87.8 1 3.5E-05 40.5 6.7 46 28-73 102-153 (272)
453 1jay_A Coenzyme F420H2:NADP+ o 87.8 0.54 1.8E-05 40.1 4.7 32 43-74 2-34 (212)
454 2pd4_A Enoyl-[acyl-carrier-pro 87.8 0.54 1.8E-05 41.9 4.8 35 40-74 5-42 (275)
455 3nlc_A Uncharacterized protein 87.8 0.22 7.4E-06 49.7 2.4 43 157-209 497-540 (549)
456 3tjr_A Short chain dehydrogena 87.7 1.6 5.5E-05 39.5 8.1 34 40-73 30-64 (301)
457 4da9_A Short-chain dehydrogena 87.7 1.4 4.7E-05 39.5 7.6 52 39-98 27-79 (280)
458 1vl0_A DTDP-4-dehydrorhamnose 87.7 0.39 1.3E-05 42.9 3.9 34 40-73 11-45 (292)
459 2gcg_A Glyoxylate reductase/hy 87.7 0.6 2.1E-05 43.2 5.2 35 40-74 154-188 (330)
460 3ba1_A HPPR, hydroxyphenylpyru 87.7 0.63 2.2E-05 43.2 5.4 36 40-75 163-198 (333)
461 1zcj_A Peroxisomal bifunctiona 87.7 0.39 1.3E-05 46.7 4.1 35 41-75 37-71 (463)
462 2b69_A UDP-glucuronate decarbo 87.7 0.62 2.1E-05 42.8 5.3 35 40-74 26-61 (343)
463 4amu_A Ornithine carbamoyltran 87.7 2.7 9.4E-05 39.3 9.7 79 21-101 160-240 (365)
464 2y0c_A BCEC, UDP-glucose dehyd 87.7 0.37 1.3E-05 47.2 3.9 34 41-74 8-41 (478)
465 3ucx_A Short chain dehydrogena 87.7 1.6 5.5E-05 38.5 7.9 34 40-73 10-44 (264)
466 4dmm_A 3-oxoacyl-[acyl-carrier 87.7 1.3 4.4E-05 39.4 7.3 51 40-98 27-78 (269)
467 2d0i_A Dehydrogenase; structur 87.6 0.57 2E-05 43.5 5.1 36 39-74 144-179 (333)
468 3v2g_A 3-oxoacyl-[acyl-carrier 87.6 1.9 6.6E-05 38.3 8.5 53 39-99 29-82 (271)
469 1wwk_A Phosphoglycerate dehydr 87.6 0.68 2.3E-05 42.4 5.5 35 40-74 141-175 (307)
470 3g0o_A 3-hydroxyisobutyrate de 87.5 0.46 1.6E-05 43.3 4.2 33 41-73 7-39 (303)
471 3sc6_A DTDP-4-dehydrorhamnose 87.4 0.35 1.2E-05 43.1 3.4 31 43-73 7-38 (287)
472 3pdu_A 3-hydroxyisobutyrate de 87.4 0.34 1.2E-05 43.6 3.4 34 42-75 2-35 (287)
473 2pv7_A T-protein [includes: ch 87.4 0.57 1.9E-05 42.6 4.8 33 42-74 22-55 (298)
474 3enk_A UDP-glucose 4-epimerase 87.4 0.87 3E-05 41.5 6.2 36 40-75 4-40 (341)
475 1yb1_A 17-beta-hydroxysteroid 87.4 1.8 6.2E-05 38.3 8.1 34 40-73 30-64 (272)
476 2ekl_A D-3-phosphoglycerate de 87.4 0.72 2.4E-05 42.4 5.5 36 39-74 140-175 (313)
477 1rpn_A GDP-mannose 4,6-dehydra 87.4 0.64 2.2E-05 42.3 5.2 36 40-75 13-49 (335)
478 3gg2_A Sugar dehydrogenase, UD 87.3 0.42 1.4E-05 46.4 4.1 33 42-74 3-35 (450)
479 3h7a_A Short chain dehydrogena 87.3 1.2 4.3E-05 39.0 6.9 35 40-74 6-41 (252)
480 2bka_A CC3, TAT-interacting pr 87.3 0.6 2.1E-05 40.3 4.8 36 40-75 17-55 (242)
481 3qha_A Putative oxidoreductase 87.3 0.43 1.5E-05 43.3 3.9 35 41-75 15-49 (296)
482 2ewd_A Lactate dehydrogenase,; 87.2 0.54 1.8E-05 43.2 4.6 35 41-75 4-39 (317)
483 3k96_A Glycerol-3-phosphate de 87.2 0.5 1.7E-05 44.3 4.4 33 41-73 29-61 (356)
484 1vlv_A Otcase, ornithine carba 87.1 3.2 0.00011 38.3 9.7 78 19-100 145-224 (325)
485 3rui_A Ubiquitin-like modifier 87.1 0.63 2.2E-05 43.3 5.0 34 40-73 33-67 (340)
486 2cuk_A Glycerate dehydrogenase 87.1 0.76 2.6E-05 42.2 5.5 36 40-75 143-178 (311)
487 4gbj_A 6-phosphogluconate dehy 87.1 1.4 4.7E-05 40.1 7.2 33 42-74 6-38 (297)
488 1jnr_A Adenylylsulfate reducta 87.1 0.4 1.4E-05 48.7 3.9 56 84-139 152-216 (643)
489 3tfo_A Putative 3-oxoacyl-(acy 87.1 1.6 5.6E-05 38.7 7.6 51 40-99 3-54 (264)
490 3ego_A Probable 2-dehydropanto 87.1 0.54 1.9E-05 43.0 4.5 76 42-140 3-78 (307)
491 1dhr_A Dihydropteridine reduct 87.1 0.77 2.6E-05 40.0 5.4 36 40-75 6-42 (241)
492 1sb8_A WBPP; epimerase, 4-epim 87.0 0.71 2.4E-05 42.5 5.4 35 40-74 26-61 (352)
493 1n7h_A GDP-D-mannose-4,6-dehyd 87.0 0.67 2.3E-05 43.2 5.2 34 42-75 29-63 (381)
494 3osu_A 3-oxoacyl-[acyl-carrier 87.0 1.6 5.3E-05 38.1 7.4 52 40-99 3-55 (246)
495 3dqp_A Oxidoreductase YLBE; al 86.9 0.56 1.9E-05 40.0 4.3 35 43-77 2-37 (219)
496 2jah_A Clavulanic acid dehydro 86.9 2.1 7.2E-05 37.3 8.2 34 40-73 6-40 (247)
497 1zud_1 Adenylyltransferase THI 86.9 0.7 2.4E-05 41.0 5.0 34 40-73 27-61 (251)
498 3e03_A Short chain dehydrogena 86.8 1.1 3.9E-05 39.8 6.5 39 40-78 5-44 (274)
499 3un1_A Probable oxidoreductase 86.8 2 6.8E-05 37.9 8.0 36 40-75 27-63 (260)
500 1rkx_A CDP-glucose-4,6-dehydra 86.8 0.76 2.6E-05 42.3 5.5 36 40-75 8-44 (357)
No 1
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=9.8e-48 Score=378.93 Aligned_cols=301 Identities=17% Similarity=0.295 Sum_probs=258.8
Q ss_pred CCccCCCCCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHH
Q 018320 6 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 85 (358)
Q Consensus 6 ~P~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~ 85 (358)
+|+.+++|| +++|++++++|+..+++.+...++++++|||||++|+|+|..|+++|.+||++++.+++++. +|+++
T Consensus 115 ~p~~p~i~g---~~~~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~-~d~~~ 190 (437)
T 4eqs_A 115 SANSLGFES---DITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKL-MDADM 190 (437)
T ss_dssp EECCCCCCC---TTEECCSSHHHHHHHHHHHHHHTCCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTT-SCGGG
T ss_pred ccccccccC---ceEEeeccHHHHHHHHHhhhccCCcEEEEECCccchhhhHHHHHhcCCcceeeeeecccccc-ccchh
Confidence 455555665 57999999999999998877667899999999999999999999999999999999999986 89999
Q ss_pred HHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChhhhhcc-ccc-ccCcEEEeccc
Q 018320 86 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQ-LTL-EKGGIKVTGRL 163 (358)
Q Consensus 86 ~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~-~~~-~~g~i~vd~~~ 163 (358)
++.+.+.++++||+++++++|++++. + .+.+++|+++++|.|++++|++||+++++.. +.. ++|+|.||++|
T Consensus 191 ~~~~~~~l~~~gV~i~~~~~v~~~~~--~----~v~~~~g~~~~~D~vl~a~G~~Pn~~~~~~~gl~~~~~G~I~vd~~~ 264 (437)
T 4eqs_A 191 NQPILDELDKREIPYRLNEEINAING--N----EITFKSGKVEHYDMIIEGVGTHPNSKFIESSNIKLDRKGFIPVNDKF 264 (437)
T ss_dssp GHHHHHHHHHTTCCEEESCCEEEEET--T----EEEETTSCEEECSEEEECCCEEESCGGGTTSSCCCCTTSCEECCTTC
T ss_pred HHHHHHHhhccceEEEeccEEEEecC--C----eeeecCCeEEeeeeEEEEeceecCcHHHHhhhhhhccCCcEecCCCc
Confidence 99999999999999999999999863 2 4778899999999999999999999988754 666 67899999999
Q ss_pred cCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeecccceEEE
Q 018320 164 QSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGDNVGEVVH 243 (358)
Q Consensus 164 ~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~ 243 (358)
|||+|+|||+|||+..+...++.+.+.+++..|.+||+++|+||+|.......+.++..+..++++.++++|+++.++..
T Consensus 265 ~Ts~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~g~~~~~~~~~~~~~~~~~~~p~ia~vGlte~~a~~ 344 (437)
T 4eqs_A 265 ETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIAGNDTIEFKGFLGNNIVKFFDYTFASVGVKPNELKQ 344 (437)
T ss_dssp BCSSTTEEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHHSCTTCCCCCBCCCEEEEETTEEEEEEESCGGGGGG
T ss_pred cCCCCCEEEEEEccCcccccCCccccchhHHHHHHHHHHHHHHHcCCCCcccccceeEEeeeeccceEEEeeCCHHHHHh
Confidence 99999999999999999988898888999999999999999999997653445667777888999999999999875421
Q ss_pred -------E--ccC------CCCceEEEEe--eCCeEEEEEEeCCC-HH-HHHHHHHHHHcCCCcccHHHHhhcCCcccCC
Q 018320 244 -------Y--GNF------SGTTFGAYWV--NKGRLVGSFLEGGT-KE-EYEAIAKATRLQPVVEDLAELETQGLGFALA 304 (358)
Q Consensus 244 -------~--g~~------~~~~~~~~~~--~~g~ilGa~~vg~~-~~-~~~~~a~ai~~~~~~~dl~~l~~~~~~yap~ 304 (358)
. ... +..+|.|+.. ++++|||+|++|++ +. .++.++.||++++|++||.+++ ++|+|+
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~g~~Kli~d~~~~~ilGa~~~g~~~a~e~i~~~~~ai~~~~t~~~l~~~~---~~yhP~ 421 (437)
T 4eqs_A 345 FDYKMVEVTQGAHANYYPGNSPLHLRVYYDTSNRQILRAAAVGKEGADKRIDVLSMAMMNQLTVDELTEFE---VAFAPP 421 (437)
T ss_dssp SCEEEEEEEEESSCTTSSSCCEEEEEEEEETTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBGGGGGGCC---CCCCTT
T ss_pred CCceEEEEecCCchhhcCCCCcEEEEEEEECCCCEEEEEEEECcCCHHHHHHHHHHHHHcCCcHHHHhcCc---cccCCC
Confidence 1 111 1123666555 58999999999985 54 4678899999999999999999 999999
Q ss_pred cCCCCCCCCcccccc
Q 018320 305 VSQKPLPSTPVDGKT 319 (358)
Q Consensus 305 ~~~~~~~~~~~~~~~ 319 (358)
|+++.+++++.+++|
T Consensus 422 ~s~~~d~v~~aa~~A 436 (437)
T 4eqs_A 422 YSHPKDLINMIGYKA 436 (437)
T ss_dssp TCCSSCHHHHHHHTT
T ss_pred CCchHHHHHHHHHhc
Confidence 999999888877653
No 2
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=1.6e-45 Score=366.27 Aligned_cols=317 Identities=21% Similarity=0.249 Sum_probs=260.8
Q ss_pred CCccCCCCCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhC-CCcEEEEeeCCcccCccCCHH
Q 018320 6 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVIN-KINVTMVFPEAHCMARLFTPK 84 (358)
Q Consensus 6 ~P~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~-g~~Vtlv~~~~~~l~~~~~~~ 84 (358)
+|..+++||.+.++++++++.+++..+++.+....+++++|||+|++|+|+|..|++. |.+||++++.++++++.++++
T Consensus 124 ~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~~~~~ 203 (472)
T 3iwa_A 124 KANRPPVEGMDLAGVTPVTNLDEAEFVQHAISAGEVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGFTSKS 203 (472)
T ss_dssp EECCCSCTTTTSBTEEECCSHHHHHHHHHHCCTTSCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTTSCHH
T ss_pred CcCCCCCCCCCCCCEEEeCCHHHHHHHHHHhhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccccCHH
Confidence 4666678998888999999999999998877654689999999999999999999999 999999999999998558999
Q ss_pred HHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChhhhhcc-ccc-ccCcEEEecc
Q 018320 85 IASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQ-LTL-EKGGIKVTGR 162 (358)
Q Consensus 85 ~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~-~~~-~~g~i~vd~~ 162 (358)
+.+.+.+.+++.||+++++++|++++. +++.+. +.+.+|+++++|.||+|+|++|++++++.. +.. ++|+|.||++
T Consensus 204 ~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v~-v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~~g~i~vd~~ 281 (472)
T 3iwa_A 204 LSQMLRHDLEKNDVVVHTGEKVVRLEG-ENGKVA-RVITDKRTLDADLVILAAGVSPNTQLARDAGLELDPRGAIIVDTR 281 (472)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEE-SSSBEE-EEEESSCEEECSEEEECSCEEECCHHHHHHTCCBCTTCCEECCTT
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEc-cCCeEE-EEEeCCCEEEcCEEEECCCCCcCHHHHHhCCccCCCCCCEEECCC
Confidence 999999999999999999999999986 345543 777889999999999999999999887643 665 6789999999
Q ss_pred ccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeecccceEE
Q 018320 163 LQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGDNVGEVV 242 (358)
Q Consensus 163 ~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~~~~ 242 (358)
++|+.|+|||+|||+..+...+|.+.+.+++..|..||+.||+||+|... .....+|++++.+|++.++++|+++.++.
T Consensus 282 ~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~-~~~~~~~~~~~~~~~~~~a~vG~~e~~a~ 360 (472)
T 3iwa_A 282 MRTSDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLADGDA-TFPGAVGSWAVKLFEGSASGAGLTVEGAL 360 (472)
T ss_dssp CBCSSTTEEECGGGEEEEBTTTSSEECCCCTTHHHHHHHHHHHHHTTCCC-CCCCBCCCEEEECSSCEEEEEECCHHHHH
T ss_pred cccCCCCEEEeccceecccccCCceeecchHHHHHHHHHHHHHHhcCCCc-cCCCCCcceEEEECCceeEEEECCHHHHH
Confidence 99999999999999998887778777778889999999999999998764 34456788899999999999999876421
Q ss_pred ---------EEcc--------CCCCceEEEEe--eCCeEEEEEEeCC--C--HHHHHHHHHHHHcCCCcccHHHHhhcCC
Q 018320 243 ---------HYGN--------FSGTTFGAYWV--NKGRLVGSFLEGG--T--KEEYEAIAKATRLQPVVEDLAELETQGL 299 (358)
Q Consensus 243 ---------~~g~--------~~~~~~~~~~~--~~g~ilGa~~vg~--~--~~~~~~~a~ai~~~~~~~dl~~l~~~~~ 299 (358)
.... .+..+|.|+.. ++|+|||+|++|+ + .+.++.++.||++++|++||.+++ +
T Consensus 361 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~~~~~~~~i~~~~~ai~~~~t~~~l~~~~---~ 437 (472)
T 3iwa_A 361 REGYDAVNVHVEQFDRAHFYPEKTIMTLQLVVDRPTRRVLGIQGFSTLGDALTARINAVATMLASKPTVEDISNAE---V 437 (472)
T ss_dssp HTTCCEEEEEEEC-----------CEEEEEEEETTTCBEEEEEEEESCHHHHHHHHHHHHHHHTTCCBHHHHHTCC---C
T ss_pred HcCCceEEEEEecCCccCccCCCceEEEEEEEECCCCEEEEEEEECCCcccHHHHHHHHHHHHHcCCCHHHHhccc---c
Confidence 1111 11124667665 5899999999998 3 345788999999999999999988 9
Q ss_pred cccCCcCCCCCCCCccccccccccccCcc
Q 018320 300 GFALAVSQKPLPSTPVDGKTVPGLVLGKS 328 (358)
Q Consensus 300 ~yap~~~~~~~~~~~~~~~~~n~~~~~~~ 328 (358)
.|+|+|+++.++.+..++.+.|.++|+.-
T Consensus 438 ~~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (472)
T 3iwa_A 438 VYSPPFASAMDIVNVAGNVADNVLAGREG 466 (472)
T ss_dssp C--------CCHHHHHHHHHHHHHC----
T ss_pred cCCCCCCCcccHHHHHHHHHHHhhcCccc
Confidence 99999999999999999999999999653
No 3
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=1.1e-44 Score=367.62 Aligned_cols=327 Identities=23% Similarity=0.300 Sum_probs=279.1
Q ss_pred CCccCCCCCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHH
Q 018320 6 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 85 (358)
Q Consensus 6 ~P~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~ 85 (358)
+|..+++||.+.+++++++++.++..+.+.+....+++++|||+|++|+|+|..|++.|.+||++++.+++++. +++++
T Consensus 116 ~p~~p~ipG~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~ 194 (565)
T 3ntd_A 116 APIVPPIPGVDNPLTHSLRNIPDMDRILQTIQMNNVEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTP-VDREM 194 (565)
T ss_dssp EECCCCCTTCCSTTEECCSSHHHHHHHHHHHHHTTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCTT-SCHHH
T ss_pred CCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHhhCCCCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccchh-cCHHH
Confidence 56667899998899999999999999988776667899999999999999999999999999999999999995 89999
Q ss_pred HHHHHHHHHhCCCEEEcCCeeeEEEEc------------------CCCcEEEEEcCCCcEEecCeEEEeeCCCCChhhhh
Q 018320 86 ASYYEEYYKSKGVKFVKGTVLSSFDVD------------------SNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFE 147 (358)
Q Consensus 86 ~~~~~~~l~~~gV~v~~~~~v~~i~~~------------------~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~ 147 (358)
.+.+.+.+++.||++++++.+++++.+ +++.+ .+.+.+|+++++|.||+|+|++|++++++
T Consensus 195 ~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~g~~i~~D~vi~a~G~~p~~~l~~ 273 (565)
T 3ntd_A 195 AGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHL-SLTLSNGELLETDLLIMAIGVRPETQLAR 273 (565)
T ss_dssp HHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEE-EEEETTSCEEEESEEEECSCEEECCHHHH
T ss_pred HHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcE-EEEEcCCCEEEcCEEEECcCCccchHHHH
Confidence 999999999999999999999999863 23433 46678899999999999999999998876
Q ss_pred cc-ccc-ccCcEEEeccccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEE
Q 018320 148 GQ-LTL-EKGGIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSR 225 (358)
Q Consensus 148 ~~-~~~-~~g~i~vd~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~ 225 (358)
.. +.+ ++|+|.||++++|+.|+|||+|||+..+...+|.+.+.+++..|..||+.||+||+|... ......++.++.
T Consensus 274 ~~g~~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~-~~~~~~~~~~~~ 352 (565)
T 3ntd_A 274 DAGLAIGELGGIKVNAMMQTSDPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRMAADNMFGREE-RYQGTQGTAICK 352 (565)
T ss_dssp HHTCCBCTTSSBCCCTTCBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCCC-CCCCBCCCEEEE
T ss_pred hCCcccCCCCCEEECCCcccCCCCEEEeeeeEeeccccCCceeecccHHHHHHHHHHHHHHhcCCCc-cCCCcccceEEE
Confidence 43 665 678999999999999999999999998887778777778999999999999999998764 222345667788
Q ss_pred ecCceEEEeecccceEE---------EEcc--------CCCCceEEEEe--eCCeEEEEEEeCCCH--HHHHHHHHHHHc
Q 018320 226 VFTLSWQFYGDNVGEVV---------HYGN--------FSGTTFGAYWV--NKGRLVGSFLEGGTK--EEYEAIAKATRL 284 (358)
Q Consensus 226 ~~~~~~~~~G~~~~~~~---------~~g~--------~~~~~~~~~~~--~~g~ilGa~~vg~~~--~~~~~~a~ai~~ 284 (358)
+|++.++++|+++.++. .... ....+|.|+.. ++|+|||+|++|+++ +.++.++.||++
T Consensus 353 ~~~~~~~~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~v~~~~~~~ilG~~~~g~~a~~e~i~~~~~ai~~ 432 (565)
T 3ntd_A 353 VFDLAVGATGKNEKQLKQAGIAFEKVYVHTASHASYYPGAEVVSFKLLFDPVKGTIFGAQAVGKDGIDKRIDVMAVAQRA 432 (565)
T ss_dssp ETTEEEEEEECCHHHHHHTTCCCEEEEEEEESSCTTSTTCCEEEEEEEECTTTCBEEEEEEEESSSHHHHHHHHHHHHHT
T ss_pred EcCcEEEEecCCHHHHHHcCCCeEEEEEecCcccCcCCCCceEEEEEEEECCCCEEEEEEEECCccHHHHHHHHHHHHHc
Confidence 99999999999876521 1111 01123667666 689999999999886 457889999999
Q ss_pred CCCcccHHHHhhcCCcccCCcCCCCCCCCccccccccccccCccccchhhhhhH
Q 018320 285 QPVVEDLAELETQGLGFALAVSQKPLPSTPVDGKTVPGLVLGKSLYPLHATAGV 338 (358)
Q Consensus 285 ~~~~~dl~~l~~~~~~yap~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 338 (358)
++|++||.+++ +.|+|+|++..++.+..++.+.|.+.+..+.|+++|+.+.
T Consensus 433 ~~~~~~l~~~~---~~~~P~~~~~~~~i~~aa~~~~~~~~~~~~~i~~~~~~~~ 483 (565)
T 3ntd_A 433 GMTVEQLQHLE---LSYAPPYGSAKDVINQAAFVASNIIKGDATPIHFDQIDNL 483 (565)
T ss_dssp TCBHHHHTTCC---CCCCTTTCCSSCHHHHHHHHHHHHHHTSCCEECTTTTTSC
T ss_pred CCCHHHHhhhh---hccCcccCchhhhhhhhhhhhhhccccccceeeHHHHHhC
Confidence 99999999988 9999999999999998888889999999999999988653
No 4
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=3.4e-44 Score=366.07 Aligned_cols=326 Identities=24% Similarity=0.311 Sum_probs=280.5
Q ss_pred CCccCCCCCC-CCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHH
Q 018320 6 KLEEFGLSGS-DAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPK 84 (358)
Q Consensus 6 ~P~~~~ipG~-~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~ 84 (358)
+|..+++||. +.+++++.+++.++.++...+....+++++|||+|++|+|+|..|++.|.+||++++.+++++. ++++
T Consensus 151 ~p~~p~i~G~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~ 229 (588)
T 3ics_A 151 KPIVPSIPGIEEAKALFTLRNVPDTDRIKAYIDEKKPRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP-IDYE 229 (588)
T ss_dssp EECCCCCTTTTTCTTEEECSSHHHHHHHHHHHHHHCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-SCHH
T ss_pred CCCCCCCCCcccCCCeEEeCCHHHHHHHHHHHhhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc-CCHH
Confidence 4556678998 7889999999999999988776556899999999999999999999999999999999999997 8999
Q ss_pred HHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChhhhhcc-ccc-ccCcEEEecc
Q 018320 85 IASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQ-LTL-EKGGIKVTGR 162 (358)
Q Consensus 85 ~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~-~~~-~~g~i~vd~~ 162 (358)
+.+.+.+.|++.||++++++.|++++.++ + .+.+.+|+++++|.||+|+|++|++++++.. +.. ++|+|.||++
T Consensus 230 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~---~v~~~~g~~i~~D~Vi~a~G~~p~~~~l~~~g~~~~~~g~i~vd~~ 305 (588)
T 3ics_A 230 MAAYVHEHMKNHDVELVFEDGVDALEENG-A---VVRLKSGSVIQTDMLILAIGVQPESSLAKGAGLALGVRGTIKVNEK 305 (588)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEGGG-T---EEEETTSCEEECSEEEECSCEEECCHHHHHTTCCBCGGGCBCCCTT
T ss_pred HHHHHHHHHHHcCCEEEECCeEEEEecCC-C---EEEECCCCEEEcCEEEEccCCCCChHHHHhcCceEcCCCCEEECCc
Confidence 99999999999999999999999997532 2 3677899999999999999999999887654 665 6789999999
Q ss_pred ccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcC-CCCCCCCCCCCeEEEEecCceEEEeecccceE
Q 018320 163 LQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIME-PDKTDKFDYLPFFYSRVFTLSWQFYGDNVGEV 241 (358)
Q Consensus 163 ~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g-~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~~~ 241 (358)
++|+.|+|||+|||+..+...+|.+.+.+++..|..||+.||+||+| ... .....+|+.+..+|++.++++|+++.++
T Consensus 306 ~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~-~~~~~~~~~~~~~~~~~~a~vGlte~~a 384 (588)
T 3ics_A 306 FQTSDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRMLADIIHGHTDS-LYKGTLGTSVAKVFDLTVATTGLNEKIL 384 (588)
T ss_dssp SBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCCSS-CCCCBCCCEEEEETTEEEEEEECCHHHH
T ss_pred cccCCCCEEEeeeeeecccccCCcccccccHHHHHHHHHHHHHHhcCCCcc-ccCCcccceEEEECCeEEEEecCCHHHH
Confidence 99999999999999998877778777778999999999999999998 443 3445678888889999999999988643
Q ss_pred EE---------Ec--cC------CCCceEEEEe--eCCeEEEEEEeCCC-H-HHHHHHHHHHHcCCCcccHHHHhhcCCc
Q 018320 242 VH---------YG--NF------SGTTFGAYWV--NKGRLVGSFLEGGT-K-EEYEAIAKATRLQPVVEDLAELETQGLG 300 (358)
Q Consensus 242 ~~---------~g--~~------~~~~~~~~~~--~~g~ilGa~~vg~~-~-~~~~~~a~ai~~~~~~~dl~~l~~~~~~ 300 (358)
.. .. .. ...+|.|+.. ++|+|||+|++|+. + +.++.++.||++++|++||.+++ +.
T Consensus 385 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~~~~~~ilG~~~~g~~~~~e~i~~~~~ai~~~~t~~~l~~~~---~~ 461 (588)
T 3ics_A 385 KRLNIPYEVVHVQANSHAGYYPNATPVLIKLIFNKDSGKIYGAQTLGRDGVDKRMDVIATAIKANLTVLDLPDLE---LS 461 (588)
T ss_dssp HHTTCCCEEEEEEEESSCTTSTTCCEEEEEEEECTTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBTTTGGGCC---CC
T ss_pred HHcCCCeEEEEEecCCccccCCCCceEEEEEEEECCCCeEEEEEEEcCCcHHHHHHHHHHHHHcCCCHHHhhhhh---hc
Confidence 21 11 10 1123667665 58999999999974 4 45788999999999999999999 99
Q ss_pred ccCCcCCCCCCCCccccccccccccCccccchhhhhhHHH
Q 018320 301 FALAVSQKPLPSTPVDGKTVPGLVLGKSLYPLHATAGVIL 340 (358)
Q Consensus 301 yap~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 340 (358)
|+|+|++..++.+.+++.+.|.+.+..+.|+++|+.+.+.
T Consensus 462 ~~P~~~~~~d~i~~aa~~a~n~~~~~~~~i~~~~~~~~~~ 501 (588)
T 3ics_A 462 YAPPYSSAKDPVNMVGYAASNIVDGFVDTVQWHEIDRIVE 501 (588)
T ss_dssp CSTTTCCSSCHHHHHHHHHHHHHTTSCCEECTTTHHHHHH
T ss_pred cCCCcccccchhhhcccccccccccccceecHHHHHHHhc
Confidence 9999999999999998889999999999999999987764
No 5
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=4.4e-43 Score=346.66 Aligned_cols=305 Identities=21% Similarity=0.240 Sum_probs=256.8
Q ss_pred CCccCCCCCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHH
Q 018320 6 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 85 (358)
Q Consensus 6 ~P~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~ 85 (358)
+|..+++||.+.+++++.++.+++..+.+.+...++++++|||+|++|+|+|..|++.|.+||++++.+++++..+++++
T Consensus 113 ~p~~p~i~G~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~ 192 (449)
T 3kd9_A 113 SPQVPAIEGVNLKGVFTADLPPDALAIREYMEKYKVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRRSFDKEV 192 (449)
T ss_dssp EECCCSCBTTTSTTEECSCSTHHHHHHHHHHSSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHH
T ss_pred CCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHH
Confidence 45666789998899999999999999988886556899999999999999999999999999999999999987689999
Q ss_pred HHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChhhhhcc-ccc-ccCcEEEeccc
Q 018320 86 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQ-LTL-EKGGIKVTGRL 163 (358)
Q Consensus 86 ~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~-~~~-~~g~i~vd~~~ 163 (358)
.+.+.+.+++. |++++++.+++++.+ +.+..+ +.+++++++|.|++|+|++|++++++.. +.. ++|+|.||+++
T Consensus 193 ~~~l~~~l~~~-v~i~~~~~v~~i~~~--~~v~~v-~~~g~~i~~D~Vv~a~G~~p~~~l~~~~gl~~~~~G~i~vd~~~ 268 (449)
T 3kd9_A 193 TDILEEKLKKH-VNLRLQEITMKIEGE--ERVEKV-VTDAGEYKAELVILATGIKPNIELAKQLGVRIGETGAIWTNEKM 268 (449)
T ss_dssp HHHHHHHHTTT-SEEEESCCEEEEECS--SSCCEE-EETTEEEECSEEEECSCEEECCHHHHHTTCCBCTTSSBCCCTTC
T ss_pred HHHHHHHHHhC-cEEEeCCeEEEEecc--CcEEEE-EeCCCEEECCEEEEeeCCccCHHHHHhCCccCCCCCCEEECCCC
Confidence 99999999999 999999999999853 233233 4577899999999999999999987654 666 67889999999
Q ss_pred cCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeecccceEEE
Q 018320 164 QSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGDNVGEVVH 243 (358)
Q Consensus 164 ~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~ 243 (358)
+|+.|+|||+|||+..+...+|.+.+.+++..|..||+.+|.||+|... ......|+.++.++++.++++|+++.++..
T Consensus 269 ~t~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa~~i~g~~~-~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~ 347 (449)
T 3kd9_A 269 QTSVENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIAGKEL-HFPGVLGTAVTKFMDVEIGKTGLTEMEALK 347 (449)
T ss_dssp BCSSTTEEECSTTBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTCCC-CCCCBCCCEEEEETTEEEEEEECCHHHHHH
T ss_pred ccCCCCEEEeeeeeeeccccCCceEEeccHHHHHHHHHHHHHHhcCCCc-cCCCcccceEEEEcCcEEEEecCCHHHHHH
Confidence 9999999999999998887778777778999999999999999998764 233456888999999999999998764311
Q ss_pred Ec-----------c------CCCCceEEEEe--eCCeEEEEEEeCCCHH-HHHHHHHHHHcCCCcccHHHHhhcCCcccC
Q 018320 244 YG-----------N------FSGTTFGAYWV--NKGRLVGSFLEGGTKE-EYEAIAKATRLQPVVEDLAELETQGLGFAL 303 (358)
Q Consensus 244 ~g-----------~------~~~~~~~~~~~--~~g~ilGa~~vg~~~~-~~~~~a~ai~~~~~~~dl~~l~~~~~~yap 303 (358)
.| + ....+|.|+.. ++|+|||+|++|+.+. .++.++.||++++|++||.+++ +.|+|
T Consensus 348 ~g~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~---~~~~p 424 (449)
T 3kd9_A 348 EGYDVRTAFIKASTRPHYYPGGREIWLKGVVDNETNRLLGVQVVGSDILPRIDTAAAMLMAGFTTKDAFFTD---LAYAP 424 (449)
T ss_dssp TTCCEEEEEEEEESSCTTSTTCCEEEEEEEEETTTCBEEEEEEEESSCHHHHHHHHHHHHTTCBHHHHHTCC---CCCBT
T ss_pred CCCceEEEEEecCCccccCCCCceEEEEEEEECCCCEEEEEEEEChHHHHHHHHHHHHHHcCCcHHHHhhcc---cccCC
Confidence 10 0 01123777665 4699999999998755 4678899999999999999988 99999
Q ss_pred CcCCCCCCCCccccc
Q 018320 304 AVSQKPLPSTPVDGK 318 (358)
Q Consensus 304 ~~~~~~~~~~~~~~~ 318 (358)
+|++..++.+..++.
T Consensus 425 ~~~~~~~~~~~~~~~ 439 (449)
T 3kd9_A 425 PFAPVWDPLIVLARV 439 (449)
T ss_dssp TTBCSSCHHHHHHHH
T ss_pred CCCCchhHHHHHHHH
Confidence 999999888776643
No 6
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=100.00 E-value=8.4e-43 Score=344.91 Aligned_cols=310 Identities=18% Similarity=0.295 Sum_probs=256.3
Q ss_pred CCccCCCCCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHH
Q 018320 6 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 85 (358)
Q Consensus 6 ~P~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~ 85 (358)
+|..+++||.+.++++++++++++.++.+... .+++++|||+|++|+|+|..|+++|.+||++++.++++++.+++++
T Consensus 116 ~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~--~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~ 193 (452)
T 2cdu_A 116 KPTVPPIPGIDSSRVYLCKNYNDAKKLFEEAP--KAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYKYFDKEF 193 (452)
T ss_dssp EECCCCCTTTTSTTEEECSSHHHHHHHHHHGG--GCSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTTTSCHHH
T ss_pred CcCCCCCCCCCCCCEEEeCcHHHHHHHHHHhc--cCCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhhhhhhhH
Confidence 45566789988789999999999999988775 5899999999999999999999999999999999999986699999
Q ss_pred HHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChhhhhccccc-ccCcEEEecccc
Q 018320 86 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQLTL-EKGGIKVTGRLQ 164 (358)
Q Consensus 86 ~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~~~~-~~g~i~vd~~~~ 164 (358)
.+.+.+.++++||+++++++|++++. +++++..+.+ +|+++++|.||+|+|++|++++++..+.+ ++|+|.||++||
T Consensus 194 ~~~l~~~l~~~Gv~i~~~~~v~~i~~-~~~~v~~v~~-~g~~i~~D~vv~a~G~~p~~~ll~~~l~~~~~G~i~Vd~~~~ 271 (452)
T 2cdu_A 194 TDILAKDYEAHGVNLVLGSKVAAFEE-VDDEIITKTL-DGKEIKSDIAILCIGFRPNTELLKGKVAMLDNGAIITDEYMH 271 (452)
T ss_dssp HHHHHHHHHHTTCEEEESSCEEEEEE-ETTEEEEEET-TSCEEEESEEEECCCEEECCGGGTTTSCBCTTSCBCCCTTSB
T ss_pred HHHHHHHHHHCCCEEEcCCeeEEEEc-CCCeEEEEEe-CCCEEECCEEEECcCCCCCHHHHHHhhhcCCCCCEEECCCcC
Confidence 99999999999999999999999985 3455555655 78899999999999999999987665555 578899999999
Q ss_pred CCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeecccceEEE-
Q 018320 165 SSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGDNVGEVVH- 243 (358)
Q Consensus 165 t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~- 243 (358)
|+.|+|||+|||+..+...+|.+.+++++..|..||+.||.||++... ......|++++.+|++.++++|+++.++..
T Consensus 272 t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~-~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~ 350 (452)
T 2cdu_A 272 SSNRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLNLTEDKV-KDMGTQSSSGLKLYGRTYVSTGINTALAKAN 350 (452)
T ss_dssp CSSTTEEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHTSSSCCC-CCCCBCCCEEEEETTEEEEEEECCHHHHHHT
T ss_pred cCCCCEEEcceEEEeccccCCCeeecchHHHHHHHHHHHHHHhCCCCC-cCCCccceEEEEECCeeeEeecCCHHHHHHc
Confidence 999999999999998776667666678899999999999999998642 234456788899999999999988754311
Q ss_pred --------Ecc--------CCCCceEEEEe--eCCeEEEEEEeCC-CHH-HHHHHHHHHHcCCCcccHHHHhhcCCcccC
Q 018320 244 --------YGN--------FSGTTFGAYWV--NKGRLVGSFLEGG-TKE-EYEAIAKATRLQPVVEDLAELETQGLGFAL 303 (358)
Q Consensus 244 --------~g~--------~~~~~~~~~~~--~~g~ilGa~~vg~-~~~-~~~~~a~ai~~~~~~~dl~~l~~~~~~yap 303 (358)
+.+ ....+|.+++. ++|+|+|+|++|+ +.. .++.++.||++++|++||.+++ +.|+|
T Consensus 351 g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~~~~~~i~~~~~ai~~~~~~~~l~~~~---~~~~P 427 (452)
T 2cdu_A 351 NLKVSEVIIADNYRPEFMLSTDEVLMSLVYDPKTRVILGGALSSMHDVSQSANVLSVCIQNKNTIDDLAMVD---MLFQP 427 (452)
T ss_dssp TCCCEEEEEEEESSCTTBSCCCEEEEEEEECTTTCBEEEEEEEESSCCHHHHHHHHHHHHTTCBHHHHHHSC---CCCCT
T ss_pred CCceEEEEEecCCccccCCCCceEEEEEEEECCCCEEEEEEEEcCccHHHHHHHHHHHHHcCCCHHHHhhhh---hccCC
Confidence 111 01123666665 4799999999998 554 4678899999999999998776 78999
Q ss_pred CcCCCCCCCCcccccccccc
Q 018320 304 AVSQKPLPSTPVDGKTVPGL 323 (358)
Q Consensus 304 ~~~~~~~~~~~~~~~~~n~~ 323 (358)
++++...+.+..++.+.|.+
T Consensus 428 t~~e~~~~~~~aa~~~~~~~ 447 (452)
T 2cdu_A 428 QFDRPFNYLNILGQAAQAQA 447 (452)
T ss_dssp TTCCSSCHHHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHhh
Confidence 99998776666665444433
No 7
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=4.6e-43 Score=346.89 Aligned_cols=305 Identities=16% Similarity=0.188 Sum_probs=251.6
Q ss_pred CCccCCCCCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHH
Q 018320 6 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 85 (358)
Q Consensus 6 ~P~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~ 85 (358)
+|..+++||.+.+++++.++++++.++.+... .+++++|||+|++|+|+|..|++.|.+||++++.+++++..+|+++
T Consensus 114 ~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~--~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~ 191 (452)
T 3oc4_A 114 SQFSTQIRGSQTEKLLKYKFLSGALAAVPLLE--NSQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKYFDKEM 191 (452)
T ss_dssp CBCCCCCBTTTCTTEEEGGGCC----CCHHHH--TCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTCCHHH
T ss_pred ccCCCCCCCCCCCCEEEeCCHHHHHHHHHHHh--cCCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccccCCHHH
Confidence 56666799998899999999988888776665 5799999999999999999999999999999999999987789999
Q ss_pred HHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChhhhhccccc-ccCcEEEecccc
Q 018320 86 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQLTL-EKGGIKVTGRLQ 164 (358)
Q Consensus 86 ~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~~~~-~~g~i~vd~~~~ 164 (358)
.+.+.+.++++||++++++.|++++. +++.+ .+.+.++ ++++|.||+|+|++|++++++..+.+ ++|+|.||++||
T Consensus 192 ~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v-~v~~~~g-~i~aD~Vv~A~G~~p~~~~l~~~~~~~~~g~i~vd~~~~ 268 (452)
T 3oc4_A 192 VAEVQKSLEKQAVIFHFEETVLGIEE-TANGI-VLETSEQ-EISCDSGIFALNLHPQLAYLDKKIQRNLDQTIAVDAYLQ 268 (452)
T ss_dssp HHHHHHHHHTTTEEEEETCCEEEEEE-CSSCE-EEEESSC-EEEESEEEECSCCBCCCSSCCTTSCBCTTSCBCCCTTCB
T ss_pred HHHHHHHHHHcCCEEEeCCEEEEEEc-cCCeE-EEEECCC-EEEeCEEEECcCCCCChHHHHhhhccCCCCCEEECcCcc
Confidence 99999999999999999999999986 34455 6777766 89999999999999999988765555 678999999999
Q ss_pred CCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeecccceEEEE
Q 018320 165 SSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGDNVGEVVHY 244 (358)
Q Consensus 165 t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~~ 244 (358)
|+.|+|||+|||+..+...++.+.+.+++..|..||+.||.||++.... .....+...+.+|+..++++|+++.++...
T Consensus 269 t~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~~~~-~~~~~~~~~~~~~~~~~a~vG~te~~a~~~ 347 (452)
T 3oc4_A 269 TSVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNLEEKTHR-FIGSLRTMGTKVGDYYLASTGLTETEGLFF 347 (452)
T ss_dssp CSSTTEEECGGGBCEEEGGGTEEECCCCHHHHHHHHHHHTTSSSSCCCC-CCCCCCCEEEEETTEEEEEEECCSGGGGGS
T ss_pred CCCCCEEEEEeeEEeccccCCceeecchHHHHHHHHHHHHHHhcCCCcc-CCCccccEEEEEcCeeEEEecCCHHHHHHC
Confidence 9999999999999987766677666788999999999999999986532 222345566788999999999988653211
Q ss_pred c---------c------CCCCceEEEEe--eCCeEEEEEEeCC-CH-HHHHHHHHHHHcCCCcccHHHHhhcCCcccCCc
Q 018320 245 G---------N------FSGTTFGAYWV--NKGRLVGSFLEGG-TK-EEYEAIAKATRLQPVVEDLAELETQGLGFALAV 305 (358)
Q Consensus 245 g---------~------~~~~~~~~~~~--~~g~ilGa~~vg~-~~-~~~~~~a~ai~~~~~~~dl~~l~~~~~~yap~~ 305 (358)
| . ....+|.|+.. ++|+|||+|++|+ ++ +.++.++.||++++|++||.+++ +.|+|+|
T Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~t~~~l~~~~---~~~~P~~ 424 (452)
T 3oc4_A 348 PQTLASIIVRQPAPPLQHGTEILGKLIYDKVTQRVLGAQLCSKNNCLEKINTLALSIQTGQTLTDLLQKD---YFYQPSL 424 (452)
T ss_dssp SSCEEEEEEEEECTTTTCSCEEEEEEEEETTTCBEEEEEEEESSCCTHHHHHHHHHHHTTCBHHHHHTCC---CCCCTTT
T ss_pred CCceEEEEEecCCccCCCCCeEEEEEEEECCCCEEEEEEEEeCCCHHHHHHHHHHHHHcCCCHHHHHhhH---hccCCCC
Confidence 1 0 01224777665 4699999999998 54 45788999999999999999887 8899999
Q ss_pred CCCCCCCCcccccc
Q 018320 306 SQKPLPSTPVDGKT 319 (358)
Q Consensus 306 ~~~~~~~~~~~~~~ 319 (358)
+++.++.+..+..+
T Consensus 425 ~~~~~~~~~a~~~~ 438 (452)
T 3oc4_A 425 TNIYDITNLMGASA 438 (452)
T ss_dssp SCSSCHHHHHHHHH
T ss_pred CCchhHHHHHHHHH
Confidence 99988887776443
No 8
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=2e-42 Score=345.71 Aligned_cols=308 Identities=19% Similarity=0.241 Sum_probs=253.0
Q ss_pred CCccCCCCCCC-----------CCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 6 KLEEFGLSGSD-----------AENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 6 ~P~~~~ipG~~-----------~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
+|..+++||.+ .++++++++++++.++.+.+....+++++|||||++|+|+|..|+++|.+||++++.+
T Consensus 148 ~p~~p~i~G~~~~~~~~~f~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 227 (490)
T 2bc0_A 148 QPILPPIKGAEIKEGSLEFEATLENLQFVKLYQNSADVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVD 227 (490)
T ss_dssp EECCCSCBTCCBCTTCTTCCBSSTTEEECSSHHHHHHHHHHTTSTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CcCCCCCCCccccccccccccccCCEEEeCCHHHHHHHHHHhhhcCCceEEEECCCHHHHHHHHHHHHCCCeEEEEEccc
Confidence 45556688887 6789999999999999887743468999999999999999999999999999999999
Q ss_pred cccCccCCHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChhhhhccccc-c
Q 018320 75 HCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQLTL-E 153 (358)
Q Consensus 75 ~~l~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~~~~-~ 153 (358)
+++++.+++++.+.+.+.|++.||+++++++|++++. ++.+..+.+ +|+++++|.||+|+|++|++++++..+.. +
T Consensus 228 ~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~~~ll~~~l~~~~ 304 (490)
T 2bc0_A 228 TCLAGYYDRDLTDLMAKNMEEHGIQLAFGETVKEVAG--NGKVEKIIT-DKNEYDVDMVILAVGFRPNTTLGNGKIDLFR 304 (490)
T ss_dssp STTTTTSCHHHHHHHHHHHHTTTCEEEETCCEEEEEC--SSSCCEEEE-SSCEEECSEEEECCCEEECCGGGTTCSCBCT
T ss_pred chhhhHHHHHHHHHHHHHHHhCCeEEEeCCEEEEEEc--CCcEEEEEE-CCcEEECCEEEECCCCCcChHHHHhhhccCC
Confidence 9998669999999999999999999999999999985 344333444 67899999999999999999987765555 5
Q ss_pred cCcEEEeccccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEE
Q 018320 154 KGGIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQF 233 (358)
Q Consensus 154 ~g~i~vd~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~ 233 (358)
+|+|.||+++||+.|+|||+|||+..+...++.+.+++++..|..||+.||.||++... ......+++++.+|++.+++
T Consensus 305 ~G~I~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~-~~~~~~~~~~~~~~~~~~~~ 383 (490)
T 2bc0_A 305 NGAFLVNKRQETSIPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNACGTDL-EGIGVQGSNGISIYGLHMVS 383 (490)
T ss_dssp TSCBCCCTTCBCSSTTEEECGGGBCEEETTTTEEECCCCHHHHHHHHHHHHHHHTTCCC-CCCCBCCCEEEEETTEEEEE
T ss_pred CCCEEECCCcccCCCCEEEeeeeEEeccccCCceeecccHHHHHHHHHHHHHHhcCCCC-CCCCcccceEEEECCcEeEE
Confidence 78899999999999999999999998766666666678899999999999999998642 23345677888999999999
Q ss_pred eecccceEE------E---Ec---c----C--CCCceEEEEe--eCCeEEEEEEeCC-CHH-HHHHHHHHHHcCCCcccH
Q 018320 234 YGDNVGEVV------H---YG---N----F--SGTTFGAYWV--NKGRLVGSFLEGG-TKE-EYEAIAKATRLQPVVEDL 291 (358)
Q Consensus 234 ~G~~~~~~~------~---~g---~----~--~~~~~~~~~~--~~g~ilGa~~vg~-~~~-~~~~~a~ai~~~~~~~dl 291 (358)
+|+++.++. . +. . . ...+|.|++. ++|+|+|++++|+ +.. .++.++.||++++|++||
T Consensus 384 vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~~~~~l 463 (490)
T 2bc0_A 384 TGLTLEKAKRLGFDAAVTEYTDNQKPEFIEHGNFPVTIKIVYDKDSRRILGAQMAAREDVSMGIHMFSLAIQEGVTIEKL 463 (490)
T ss_dssp EECCHHHHHHTTCCEEEEEEEEESSCTTCCSSCCEEEEEEEEETTTCBEEEEEEEESSCCTTHHHHHHHHHHHTCBHHHH
T ss_pred eeCCHHHHHHcCCceEEEEEecCCcccccCCCCceEEEEEEEECCCCEEEEEEEEcCcCHHHHHHHHHHHHHcCCCHHHH
Confidence 998874321 1 11 1 0 1123666655 4799999999998 544 568899999999999999
Q ss_pred HHHhhcCCcccCCcCCCCCCCCccccccc
Q 018320 292 AELETQGLGFALAVSQKPLPSTPVDGKTV 320 (358)
Q Consensus 292 ~~l~~~~~~yap~~~~~~~~~~~~~~~~~ 320 (358)
.+++ +.|+|+++++.++.+..++.+.
T Consensus 464 ~~~~---~~~~Pt~~e~~~~~~~~~~~~~ 489 (490)
T 2bc0_A 464 ALTD---IFFLPHFNKPYNYITMAALGAK 489 (490)
T ss_dssp HHSC---CCCCTTTCCTTCHHHHHHHTCC
T ss_pred hhcc---eecCCCCCchhHHHHHHHHHhh
Confidence 8776 7899999999777666664443
No 9
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=1.6e-40 Score=325.02 Aligned_cols=287 Identities=28% Similarity=0.447 Sum_probs=252.0
Q ss_pred CCccCCCCCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHH
Q 018320 6 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 85 (358)
Q Consensus 6 ~P~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~ 85 (358)
+|+.+++||.+.++++++++.+|+.++...+.. .+++++|||+|++|+|+|..|.+.|.+||++++.++++++.+++++
T Consensus 118 ~~~~~~i~g~~~~~v~~~~~~~d~~~l~~~~~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~ 196 (415)
T 3lxd_A 118 DPRRLSCVGADLAGVHAVRTKEDADRLMAELDA-GAKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARVAGEAL 196 (415)
T ss_dssp ECCCCBTTSSCCBTEECCCSHHHHHHHHHHHHT-TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHH
T ss_pred ccCCCCCCCccccCEEEEcCHHHHHHHHHHhhh-cCCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhhcCHHH
Confidence 466677899988999999999999999887762 2799999999999999999999999999999999999998789999
Q ss_pred HHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChhhhhcc-cccccCcEEEecccc
Q 018320 86 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQ-LTLEKGGIKVTGRLQ 164 (358)
Q Consensus 86 ~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~-~~~~~g~i~vd~~~~ 164 (358)
.+.+.+.++++||++++++.|++++. +++++..+++.+|+++++|.||+|+|++|++++++.. +..+ ++|.||++++
T Consensus 197 ~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~-~gi~vd~~~~ 274 (415)
T 3lxd_A 197 SEFYQAEHRAHGVDLRTGAAMDCIEG-DGTKVTGVRMQDGSVIPADIVIVGIGIVPCVGALISAGASGG-NGVDVDEFCR 274 (415)
T ss_dssp HHHHHHHHHHTTCEEEETCCEEEEEE-SSSBEEEEEESSSCEEECSEEEECSCCEESCHHHHHTTCCCS-SSEECCTTCB
T ss_pred HHHHHHHHHhCCCEEEECCEEEEEEe-cCCcEEEEEeCCCCEEEcCEEEECCCCccChHHHHhCCCCcC-CCEEECCCCC
Confidence 99999999999999999999999987 5567778999999999999999999999999987654 5555 4599999999
Q ss_pred CCCCcEEEEccccccccccc-CcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeecccc--eE
Q 018320 165 SSNSSVYAVGDVAAFPLKLL-GETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGDNVG--EV 241 (358)
Q Consensus 165 t~~~~VyAiGD~~~~~~~~~-g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~--~~ 241 (358)
|+.|+|||+|||+..+.+.+ |.+.++++|..|..||+.||.||+|.. .++..+|+||+++|++.++++|.+.+ +.
T Consensus 275 t~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~--~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~ 352 (415)
T 3lxd_A 275 TSLTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAAKDICGAP--VPYKATPWFWSNQYDLKLQTVGLSTGHDNA 352 (415)
T ss_dssp CSSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHHHHHHHHHHTTCC--CCCCCCCEEEEEETTEEEEEEECCTTCSEE
T ss_pred cCCCCEEEEEeeeeecCcccCCcceeechHHHHHHHHHHHHHHhcCCC--CCCCCCCeeEeeeCCcEEEEEeCCCCCCEE
Confidence 99999999999999988777 888889999999999999999999976 47888999999999999999998653 56
Q ss_pred EEEccCCCCceEEEEeeCCeEEEEEEeCCCHHHHHHHHHHHHcCCCcccHHHHhhcCC
Q 018320 242 VHYGNFSGTTFGAYWVNKGRLVGSFLEGGTKEEYEAIAKATRLQPVVEDLAELETQGL 299 (358)
Q Consensus 242 ~~~g~~~~~~~~~~~~~~g~ilGa~~vg~~~~~~~~~a~ai~~~~~~~dl~~l~~~~~ 299 (358)
+..++.....|.++++++|+|+|+.++|. ......+..+|+.+.+++ ..+|.++.+
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~-~~~l~~~~~ 408 (415)
T 3lxd_A 353 VLRGDPATRSFSVVYLKGGKVVALDCVNM-VKDYVQGKKLVEARAQIA-PEQLADAGV 408 (415)
T ss_dssp EEEEEGGGTEEEEEEEETTEEEEEEEESC-HHHHHHHHHHHHHTCCCC-HHHHTCTTS
T ss_pred EEEecCCCCeEEEEEEECCEEEEEEEECC-hHHHHHHHHHHHCCCCCC-HHHhcCCCC
Confidence 66777666679999999999999999994 667777888999988775 455554333
No 10
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=2.5e-40 Score=322.62 Aligned_cols=285 Identities=29% Similarity=0.438 Sum_probs=251.7
Q ss_pred CCccCCCCCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHH
Q 018320 6 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 85 (358)
Q Consensus 6 ~P~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~ 85 (358)
+|+.+++||.+.++++++++.+++..+...+. .+++++|||+|++|+|+|..|.+.|.+||++++.++++++.+++++
T Consensus 109 ~p~~~~i~g~~~~~v~~~~~~~d~~~l~~~~~--~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~~~~~~ 186 (404)
T 3fg2_P 109 RNRMLDVPNASLPDVLYLRTLDESEVLRQRMP--DKKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARVVTPEI 186 (404)
T ss_dssp EECCCCSTTTTSTTEECCSSHHHHHHHHHHGG--GCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHH
T ss_pred CccCCCCCCCCCCcEEEECCHHHHHHHHHHhh--cCCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhccCHHH
Confidence 46667799998899999999999999988876 5799999999999999999999999999999999999988789999
Q ss_pred HHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChhhhhcc-cccccCcEEEecccc
Q 018320 86 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQ-LTLEKGGIKVTGRLQ 164 (358)
Q Consensus 86 ~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~-~~~~~g~i~vd~~~~ 164 (358)
.+.+.+.+++.||++++++.|++++. +++.+..+++.+|+++++|.||+|+|++|++++++.. +..++| |.||++++
T Consensus 187 ~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~G-i~vd~~~~ 264 (404)
T 3fg2_P 187 SSYFHDRHSGAGIRMHYGVRATEIAA-EGDRVTGVVLSDGNTLPCDLVVVGVGVIPNVEIAAAAGLPTAAG-IIVDQQLL 264 (404)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTSCEEECSEEEECCCEEECCHHHHHTTCCBSSS-EEECTTSB
T ss_pred HHHHHHHHHhCCcEEEECCEEEEEEe-cCCcEEEEEeCCCCEEEcCEEEECcCCccCHHHHHhCCCCCCCC-EEECCCcc
Confidence 99999999999999999999999986 4566778999999999999999999999999987654 555544 99999999
Q ss_pred CCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeeccc--ceEE
Q 018320 165 SSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGDNV--GEVV 242 (358)
Q Consensus 165 t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~~~--~~~~ 242 (358)
|+.|+|||+|||+..+.+.+|.+.+++++..|..||+.||.+|+|.. .++..+|++|+.+|++.++++|.+. .+.+
T Consensus 265 t~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~--~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~~ 342 (404)
T 3fg2_P 265 TSDPHISAIGDCALFESVRFGETMRVESVQNATDQARCVAARLTGDA--KPYDGYPWFWSDQGDDKLQIVGLTAGFDQVV 342 (404)
T ss_dssp CSSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHHHHHHTTTCC--CCCCCCCEEEEEETTEEEEEEECCTTCCEEE
T ss_pred cCCCCEEEeecceeecCccCCceeeehHHHHHHHHHHHHHHHhCCCC--CCCCCCCceEeEECCcEEEEEeCCCCCCEEE
Confidence 99999999999999988778888888999999999999999999876 5788899999999999999999865 3566
Q ss_pred EEccCCCCceEEEEeeCCeEEEEEEeCCCHHHHHHHHHHHHcCCCcccHHHHhhcC
Q 018320 243 HYGNFSGTTFGAYWVNKGRLVGSFLEGGTKEEYEAIAKATRLQPVVEDLAELETQG 298 (358)
Q Consensus 243 ~~g~~~~~~~~~~~~~~g~ilGa~~vg~~~~~~~~~a~ai~~~~~~~dl~~l~~~~ 298 (358)
..++.....|.++++++|+|+|+.++| .......+..+|+.+..++ ..+|.++.
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~-~~~l~~~~ 396 (404)
T 3fg2_P 343 IRGSVAERSFSAFCYKAGKLIGIESVN-RAADHVFGRKILPLDKSVT-PEQAADLS 396 (404)
T ss_dssp EEEETTTTEEEEEEEETTEEEEEEEES-CHHHHHHHHHHTTTTCCCC-HHHHHCTT
T ss_pred EEecCCCCcEEEEEEECCEEEEEEEeC-CHHHHHHHHHHHHcCCCCC-HHHhcCCC
Confidence 677776667999999999999999999 4667777888999888775 45555433
No 11
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=1.3e-40 Score=325.35 Aligned_cols=286 Identities=23% Similarity=0.346 Sum_probs=248.9
Q ss_pred CCccCCCCCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHH
Q 018320 6 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 85 (358)
Q Consensus 6 ~P~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~ 85 (358)
+|+.+++||.+.++++++++.+|+.++++.+. .+++++|||+|++|+|+|..|.+.|.+||++++.++++++.+++++
T Consensus 110 ~p~~~~ipG~~~~~v~~~~~~~d~~~l~~~~~--~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~ 187 (410)
T 3ef6_A 110 RARTMALPGSQLPGVVTLRTYGDVQVLRDSWT--SATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRVLGRRI 187 (410)
T ss_dssp EECCCCCTTTTSTTEECCCSHHHHHHHHHHCC--TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHHHHCHHH
T ss_pred cccCCCCCCccccceEEeccHHHHHHHHHHhc--cCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchhhcCHHH
Confidence 36667799998899999999999999988765 5899999999999999999999999999999999999887789999
Q ss_pred HHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChhhhhcc-cccccCcEEEecccc
Q 018320 86 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQ-LTLEKGGIKVTGRLQ 164 (358)
Q Consensus 86 ~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~-~~~~~g~i~vd~~~~ 164 (358)
.+.+.+.++++||++++++.|++++. ++.+..+++.+|+++++|.||+|+|++|++++++.. +..+ ++|.||++++
T Consensus 188 ~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~~~~v~~~dg~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~-~gi~vd~~~~ 264 (410)
T 3ef6_A 188 GAWLRGLLTELGVQVELGTGVVGFSG--EGQLEQVMASDGRSFVADSALICVGAEPADQLARQAGLACD-RGVIVDHCGA 264 (410)
T ss_dssp HHHHHHHHHHHTCEEECSCCEEEEEC--SSSCCEEEETTSCEEECSEEEECSCEEECCHHHHHTTCCBS-SSEECCTTSB
T ss_pred HHHHHHHHHHCCCEEEeCCEEEEEec--cCcEEEEEECCCCEEEcCEEEEeeCCeecHHHHHhCCCccC-CeEEEccCee
Confidence 99999999999999999999999985 334557889999999999999999999999987654 5555 5599999999
Q ss_pred CCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeecccc--eEE
Q 018320 165 SSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGDNVG--EVV 242 (358)
Q Consensus 165 t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~--~~~ 242 (358)
|+.|+|||+|||+..+... |.+.+++++..|..||+.||.+|+|.. .++..+|++|+++|++.++++|.+++ +.+
T Consensus 265 t~~~~IyA~GD~a~~~~~~-g~~~~~~~~~~A~~qg~~aa~~i~g~~--~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~~ 341 (410)
T 3ef6_A 265 TLAKGVFAVGDVASWPLRA-GGRRSLETYMNAQRQAAAVAAAILGKN--VSAPQLPVSWTEIAGHRMQMAGDIEGPGDFV 341 (410)
T ss_dssp CSSTTEEECGGGEEEEBTT-SSEECCCCHHHHHHHHHHHHHHHTTCC--CCCCBCCEEEEEETTEEEEEESCSSSSSEEE
T ss_pred ECCCCEEEEEcceeccCCC-CCeeeechHHHHHHHHHHHHHHHcCCC--CCCCCCCeeEEEECCceEEEEcCCCCCCEEE
Confidence 9999999999999988765 777788899999999999999999976 57888999999999999999998764 667
Q ss_pred EEccCCCCceEEEEeeCCeEEEEEEeCCCHHHHHHHHHHHHcCCCcccHHHHhhcCCcc
Q 018320 243 HYGNFSGTTFGAYWVNKGRLVGSFLEGGTKEEYEAIAKATRLQPVVEDLAELETQGLGF 301 (358)
Q Consensus 243 ~~g~~~~~~~~~~~~~~g~ilGa~~vg~~~~~~~~~a~ai~~~~~~~dl~~l~~~~~~y 301 (358)
..++.+...|.+++.++|+|+|+.++|. ..+...+..+|+.+..++ ..+|.++.+.+
T Consensus 342 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~-~~~~~~~~~~i~~~~~~~-~~~l~~~~~~l 398 (410)
T 3ef6_A 342 SRGMPGSGAALLFRLQERRIQAVVAVDA-PRDFALATRLVEARAAIE-PARLADLSNSM 398 (410)
T ss_dssp EESCTTSSSEEEEEEETTEEEEEEEESC-HHHHHHHHHHHHHTCBCC-HHHHHCTTSCG
T ss_pred EEeeCCCCeEEEEEEECCEEEEEEEECC-hHHHHHHHHHHhCCCCCC-HHHhcCCCCCH
Confidence 7777776679999999999999999994 666777888999888775 45565444443
No 12
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=1.7e-39 Score=317.35 Aligned_cols=277 Identities=27% Similarity=0.411 Sum_probs=236.9
Q ss_pred CCccCCC-CCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHH
Q 018320 6 KLEEFGL-SGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPK 84 (358)
Q Consensus 6 ~P~~~~i-pG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~ 84 (358)
+|..+++ ||.+ ++++++++.+|+.++++.+. .+++++|||+|++|+|+|..|+++|.+||++++.++++++.++++
T Consensus 112 ~~~~~~i~~G~~-~~v~~~~~~~~~~~l~~~~~--~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~ 188 (408)
T 2gqw_A 112 APRALPTLQGAT-MPVHTLRTLEDARRIQAGLR--PQSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRAAPAT 188 (408)
T ss_dssp EECCCGGGTTCS-SCEEECCSHHHHHHHHTTCC--TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHH
T ss_pred CCCCCCccCCCC-CcEEEECCHHHHHHHHHHhh--cCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccccCHH
Confidence 4555667 8887 89999999999998876654 479999999999999999999999999999999999998768999
Q ss_pred HHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChhhhhcc-cccccCcEEEeccc
Q 018320 85 IASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQ-LTLEKGGIKVTGRL 163 (358)
Q Consensus 85 ~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~-~~~~~g~i~vd~~~ 163 (358)
+.+.+.+.++++||+++++++|++++ + + .+++.+|+++++|.||+|+|++|++++++.. +..++| |.||+++
T Consensus 189 ~~~~l~~~l~~~GV~i~~~~~v~~i~-~--~---~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~gl~~~~g-i~Vd~~~ 261 (408)
T 2gqw_A 189 LADFVARYHAAQGVDLRFERSVTGSV-D--G---VVLLDDGTRIAADMVVVGIGVLANDALARAAGLACDDG-IFVDAYG 261 (408)
T ss_dssp HHHHHHHHHHHTTCEEEESCCEEEEE-T--T---EEEETTSCEEECSEEEECSCEEECCHHHHHHTCCBSSS-EECCTTC
T ss_pred HHHHHHHHHHHcCcEEEeCCEEEEEE-C--C---EEEECCCCEEEcCEEEECcCCCccHHHHHhCCCCCCCC-EEECCCC
Confidence 99999999999999999999999997 2 3 4677899999999999999999999887654 555544 9999999
Q ss_pred cCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeec-ccceEE
Q 018320 164 QSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGD-NVGEVV 242 (358)
Q Consensus 164 ~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~-~~~~~~ 242 (358)
||+.|+|||+|||+..+.+.+|.+.+++++..|..||+.||.||++... .++..+|++|+++|++.++++|. ...+.+
T Consensus 262 ~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~-~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~ 340 (408)
T 2gqw_A 262 RTTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVDPTA-PGYAELPWYWSDQGALRIQVAGLASGDEEI 340 (408)
T ss_dssp BCSSTTEEECGGGEEEEETTTTEEECCCCHHHHHHHHHHHHHHHHCTTS-CCCCCCCEEEEEETTEEEEEEECSCCSEEE
T ss_pred ccCCCCEEEEEEEEEecCccCCceeeccHHHHHHHHHHHHHHHhcCCCC-CcCCCCCeEEEEECCceEEEECCCCCCEEE
Confidence 9999999999999998877677777778999999999999999998753 26778999999999999999998 223455
Q ss_pred EEccCC--CCceEEEEeeCCeEEEEEEeCCCHHHHHHHHHHHHcCCCcccHHHHh
Q 018320 243 HYGNFS--GTTFGAYWVNKGRLVGSFLEGGTKEEYEAIAKATRLQPVVEDLAELE 295 (358)
Q Consensus 243 ~~g~~~--~~~~~~~~~~~g~ilGa~~vg~~~~~~~~~a~ai~~~~~~~dl~~l~ 295 (358)
..++.. ..+|.+++.++|+|+|++++|. ..++..+..+|+.+.+++. .+|.
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~l~G~~~~g~-~~~~~~~~~~i~~~~~~~~-~~l~ 393 (408)
T 2gqw_A 341 VRGEVSLDAPKFTLIELQKGRIVGATCVNN-ARDFAPLRRLLAVGAKPDR-AALA 393 (408)
T ss_dssp EESCCCSSSCCEEEEEEETTEEEEEEEESC-HHHHHHHHHHHHTTCCCCH-HHHH
T ss_pred EEccCCCCCCeEEEEEEeCCEEEEEEEECC-hHHHHHHHHHHHCCCCCCh-HHhc
Confidence 566654 4568888889999999999995 4567888999999998854 3444
No 13
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=100.00 E-value=4.8e-41 Score=331.87 Aligned_cols=304 Identities=24% Similarity=0.279 Sum_probs=248.3
Q ss_pred CCccCCCCCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHH
Q 018320 6 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 85 (358)
Q Consensus 6 ~P~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~ 85 (358)
+|..+++||.+.++++++++++++.++.+.+....+++++|||+|++|+|+|..|++.|.+||++++.++++++.+++++
T Consensus 114 ~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~ 193 (447)
T 1nhp_A 114 VPFELDIPGKDLDNIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEF 193 (447)
T ss_dssp EECCCCSTTTTSBSEECCCHHHHHHHHHHHHTCTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTCCHHH
T ss_pred CcCCCCCCCCCCCCeEEECCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccccCCHHH
Confidence 35566789988789999999999999988775445899999999999999999999999999999999999886689999
Q ss_pred HHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChhhhhccccc-ccCcEEEecccc
Q 018320 86 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQLTL-EKGGIKVTGRLQ 164 (358)
Q Consensus 86 ~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~~~~-~~g~i~vd~~~~ 164 (358)
.+.+.+.+++.||++++++.|++++.+ +.+..+.+ +++++++|.||+|+|++|++++++..+.. .+|+|.||++||
T Consensus 194 ~~~l~~~l~~~gv~i~~~~~v~~i~~~--~~v~~v~~-~~~~i~~d~vi~a~G~~p~~~~~~~~~~~~~~G~i~Vd~~~~ 270 (447)
T 1nhp_A 194 TDVLTEEMEANNITIATGETVERYEGD--GRVQKVVT-DKNAYDADLVVVAVGVRPNTAWLKGTLELHPNGLIKTDEYMR 270 (447)
T ss_dssp HHHHHHHHHTTTEEEEESCCEEEEECS--SBCCEEEE-SSCEEECSEEEECSCEEESCGGGTTTSCBCTTSCBCCCTTCB
T ss_pred HHHHHHHHHhCCCEEEcCCEEEEEEcc--CcEEEEEE-CCCEEECCEEEECcCCCCChHHHHhhhhhcCCCcEEECcccc
Confidence 999999999999999999999999853 43334554 56789999999999999999987665555 568899999999
Q ss_pred CCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeecccceEE--
Q 018320 165 SSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGDNVGEVV-- 242 (358)
Q Consensus 165 t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~~~~-- 242 (358)
|+.|+|||+|||+..+...+|.+.+++++..|..||+.+|.||++... ......++.++.++++.++++|+++.++.
T Consensus 271 t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~-~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~ 349 (447)
T 1nhp_A 271 TSEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNLEEPVK-PFPGVQGSSGLAVFDYKFASTGINEVMAQKL 349 (447)
T ss_dssp CSSTTEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHHHHHTSSSCCC-CCCCBCCCEEEEETTEEEEEEECCHHHHHHH
T ss_pred CCCCCEEEeeeEEEeeccCCCCceechhHHHHHHHHHHHHHhhcCCCC-CCCCccccEEEEECCeeeEEecCCHHHHHHc
Confidence 999999999999997766666666677899999999999999998542 23345678889999999999998865321
Q ss_pred -------EEccC--------CCCceEEEEee--CCeEEEEEEeCCC-HH-HHHHHHHHHHcCCCcccHHHHhhcCCcccC
Q 018320 243 -------HYGNF--------SGTTFGAYWVN--KGRLVGSFLEGGT-KE-EYEAIAKATRLQPVVEDLAELETQGLGFAL 303 (358)
Q Consensus 243 -------~~g~~--------~~~~~~~~~~~--~g~ilGa~~vg~~-~~-~~~~~a~ai~~~~~~~dl~~l~~~~~~yap 303 (358)
...+. +..+|.+++.+ +|+|+|+|++|+. +. .++.++.||++++|++||.+++ +.|+|
T Consensus 350 g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~~~~~l~~~~---~~~~P 426 (447)
T 1nhp_A 350 GKETKAVTVVEDYLMDFNPDKQKAWFKLVYDPETTQILGAQLMSKADLTANINAISLAIQAKMTIEDLAYAD---FFFQP 426 (447)
T ss_dssp TCCCEEEEEEEESSCTTCTTCCEEEEEEEECTTTCBEEEEEEEESSCCTTHHHHHHHHHHTTCBHHHHHTCC---CCCCT
T ss_pred CCceEEEEEEcCCccccCCCCceEEEEEEEECCCCEEEEEEEEcCccHHHHHHHHHHHHHcCCCHHHHhhcc---eecCC
Confidence 11110 11236666653 7999999999987 54 4678899999999999998776 78999
Q ss_pred CcCCCCCCCCccc
Q 018320 304 AVSQKPLPSTPVD 316 (358)
Q Consensus 304 ~~~~~~~~~~~~~ 316 (358)
++++.-.+.+..+
T Consensus 427 t~~e~~~~~~~aa 439 (447)
T 1nhp_A 427 AFDKPWNIINTAA 439 (447)
T ss_dssp TTCCSSCHHHHHH
T ss_pred CCCCcccHHHHHH
Confidence 9998865554443
No 14
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=100.00 E-value=2.8e-40 Score=329.37 Aligned_cols=303 Identities=21% Similarity=0.299 Sum_probs=249.0
Q ss_pred CCccCCCCCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHH
Q 018320 6 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 85 (358)
Q Consensus 6 ~P~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~ 85 (358)
+|..+++||.+.++++++++.+++.++++.+....+++++|||+|++|+|+|..|++.|.+||++++.+++++. +++++
T Consensus 151 ~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~ 229 (480)
T 3cgb_A 151 RPVMPEWEGRDLQGVHLLKTIPDAERILKTLETNKVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGTI-YDGDM 229 (480)
T ss_dssp EECCCCCBTTTSBTEECCSSHHHHHHHHHHHHSSCCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTSS-SCHHH
T ss_pred cccCCCCCCccCCCEEEeCCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhhc-CCHHH
Confidence 45556789988789999999999999988876546899999999999999999999999999999999998885 89999
Q ss_pred HHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChhhhhcc-ccc-ccCcEEEeccc
Q 018320 86 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQ-LTL-EKGGIKVTGRL 163 (358)
Q Consensus 86 ~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~-~~~-~~g~i~vd~~~ 163 (358)
.+.+.+.+++.||++++++.|++++.+ +.+..+.+. +.++++|.||+|+|++|++++++.. +.. ++|+|.||+++
T Consensus 230 ~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~v~~v~~~-~~~i~~D~vi~a~G~~p~~~~l~~~g~~~~~~G~I~Vd~~~ 306 (480)
T 3cgb_A 230 AEYIYKEADKHHIEILTNENVKAFKGN--ERVEAVETD-KGTYKADLVLVSVGVKPNTDFLEGTNIRTNHKGAIEVNAYM 306 (480)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEES--SBEEEEEET-TEEEECSEEEECSCEEESCGGGTTSCCCBCTTSCBCCCTTS
T ss_pred HHHHHHHHHHcCcEEEcCCEEEEEEcC--CcEEEEEEC-CCEEEcCEEEECcCCCcChHHHHhCCcccCCCCCEEECCCc
Confidence 999999999999999999999999863 445455554 5589999999999999999887654 565 57899999999
Q ss_pred cCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeecccceEE-
Q 018320 164 QSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGDNVGEVV- 242 (358)
Q Consensus 164 ~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~~~~- 242 (358)
||+.|+|||+|||+..+....|.+.+++++..|..||+.||.||++... ...+..++.++.++++.++++|+++.++.
T Consensus 307 ~ts~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~-~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~ 385 (480)
T 3cgb_A 307 QTNVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRLAGLNMLDKRR-AFKGTLGTGIIKFMNLTLARTGLNEKEAKG 385 (480)
T ss_dssp BCSSTTEEECGGGBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTCCC-CCCCBCCCEEEEETTEEEEEEECCHHHHHH
T ss_pred cCCCCCEEEeeeEEEecCCCCCcceecchHHHHHHHHHHHHHHhcCCCc-cCCCccceeEEEECCcEEEEeCCCHHHHHH
Confidence 9999999999999988776667666677899999999999999998542 12234456788999999999998865321
Q ss_pred --------EE-cc-C------CCCceEEEEe--eCCeEEEEEEeCCC-HHH-HHHHHHHHHcCCCcccHHHHhhcCCccc
Q 018320 243 --------HY-GN-F------SGTTFGAYWV--NKGRLVGSFLEGGT-KEE-YEAIAKATRLQPVVEDLAELETQGLGFA 302 (358)
Q Consensus 243 --------~~-g~-~------~~~~~~~~~~--~~g~ilGa~~vg~~-~~~-~~~~a~ai~~~~~~~dl~~l~~~~~~ya 302 (358)
.. .. . ...+|.+++. ++|+|+|++++|+. +.+ ++.++.||++++|++||.++. +.|+
T Consensus 386 ~g~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~vg~~~a~e~i~~~~~ai~~~~~~~~l~~~~---~~~~ 462 (480)
T 3cgb_A 386 LHIPYKTVKVDSTNMAGYYPNAKPLYLKLLYRSDTKQLLGGQVIGEEGVDKRIDVIAMALFNKMSIHDLEDVD---LSYA 462 (480)
T ss_dssp TTCCEEEEEEEEESSCTTSTTCCEEEEEEEEETTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBGGGGGGCC---CCCC
T ss_pred cCCceEEEEEecCCcccccCCCceEEEEEEEECCCCEEEEEEEECCccHHHHHHHHHHHHHcCCCHHHHhhcc---cccC
Confidence 11 11 0 1123666665 48999999999987 554 678899999999999998876 7899
Q ss_pred CCcCCCCCCCCccc
Q 018320 303 LAVSQKPLPSTPVD 316 (358)
Q Consensus 303 p~~~~~~~~~~~~~ 316 (358)
|++++..++.+..+
T Consensus 463 Pt~~e~~~~~~~a~ 476 (480)
T 3cgb_A 463 PPYNSVWDPIQQAA 476 (480)
T ss_dssp TTTCCSSCHHHHHH
T ss_pred CCCCCchhHHHHHH
Confidence 99999866655444
No 15
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=100.00 E-value=5.3e-39 Score=316.03 Aligned_cols=283 Identities=27% Similarity=0.476 Sum_probs=239.1
Q ss_pred CCccCCCCCCCCCC---eEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCC
Q 018320 6 KLEEFGLSGSDAEN---VCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFT 82 (358)
Q Consensus 6 ~P~~~~ipG~~~~~---v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~ 82 (358)
+|+.+++||.+.++ ++++++.+|+.++++.+. .+++++|||+|++|+|+|..|++.|.+||++++.++++++.++
T Consensus 113 ~p~~~~i~G~~~~~~~~v~~~~~~~d~~~l~~~l~--~~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~ 190 (431)
T 1q1r_A 113 RPRPLPVASGAVGKANNFRYLRTLEDAECIRRQLI--ADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERVTA 190 (431)
T ss_dssp EECCCGGGTTHHHHSTTEEESSSHHHHHHHHHTCC--TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSC
T ss_pred CccCCCCCCcccCCCceEEEECCHHHHHHHHHHhh--cCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccchhh
Confidence 45556678876556 999999999999887664 5799999999999999999999999999999999999987789
Q ss_pred HHHHHHHHHHHHhCCCEEEcCCeeeEEEEc-CCCcEEEEEcCCCcEEecCeEEEeeCCCCChhhhhcc-cccccCcEEEe
Q 018320 83 PKIASYYEEYYKSKGVKFVKGTVLSSFDVD-SNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQ-LTLEKGGIKVT 160 (358)
Q Consensus 83 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~-~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~-~~~~~g~i~vd 160 (358)
+++.+.+.+.+++.||++++++.+++++.+ +++.+..+.+.+|+++++|.||+|+|++|++++++.. +..+ ++|.||
T Consensus 191 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~~~l~~~~gl~~~-~gi~Vd 269 (431)
T 1q1r_A 191 PPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIPNCELASAAGLQVD-NGIVIN 269 (431)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEEECCHHHHHTTCCBS-SSEECC
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCCcCcchhhccCCCCC-CCEEEC
Confidence 999999999999999999999999999852 3456667888999999999999999999999987654 5555 459999
Q ss_pred ccccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeecccc-
Q 018320 161 GRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGDNVG- 239 (358)
Q Consensus 161 ~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~- 239 (358)
++++|+.|+|||+|||+..+.+.+|.+.+++++..|..||+.+|.||+|.. .++..+|++|+++|++.++++|.+++
T Consensus 270 ~~~~ts~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~--~~~~~~p~~~~~~~~~~~~~~G~~~~~ 347 (431)
T 1q1r_A 270 EHMQTSDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAAILCGKV--PRDEAAPWFWSDQYEIGLKMVGLSEGY 347 (431)
T ss_dssp TTSBCSSTTEEECGGGEEEEETTTTEEEECCSHHHHHHHHHHHHHHHTTCC--CCCCCCCEEEEEETTEEEEEEECCTTC
T ss_pred CCcccCCCCEEEEEeEEEEccccCCceEeeCHHHHHHHHHHHHHHHhcCCC--CCCCCCCeEEEEECCceEEEEeCCCCC
Confidence 999999999999999999887777877788899999999999999999876 46778999999999999999998764
Q ss_pred -eEEEEccCCCCceEEEEeeCCeEEEEEEeCCCHHHHHHHHHHHHcCCCcccHHHHh
Q 018320 240 -EVVHYGNFSGTTFGAYWVNKGRLVGSFLEGGTKEEYEAIAKATRLQPVVEDLAELE 295 (358)
Q Consensus 240 -~~~~~g~~~~~~~~~~~~~~g~ilGa~~vg~~~~~~~~~a~ai~~~~~~~dl~~l~ 295 (358)
+.+..++.....|.+++.++|+|+|++++|.. .....+..+|..+.++. ..+|.
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~g~~-~~~~~~~~~i~~~~~~~-~~~l~ 402 (431)
T 1q1r_A 348 DRIIVRGSLAQPDFSVFYLQGDRVLAVDTVNRP-VEFNQSKQIITDRLPVE-PNLLG 402 (431)
T ss_dssp SEEEEEEETTTTEEEEEEEETTEEEEEEEESCH-HHHHHHHHHHHTTCCCC-HHHHT
T ss_pred CEEEEEccCCCCeEEEEEEeCCEEEEEEEECCh-HHHHHHHHHHHCCCCCC-HHHhh
Confidence 45566665555688888899999999999964 45555667777776664 33444
No 16
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=3.2e-38 Score=306.10 Aligned_cols=256 Identities=18% Similarity=0.282 Sum_probs=220.2
Q ss_pred CCccCCCCCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHH
Q 018320 6 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 85 (358)
Q Consensus 6 ~P~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~ 85 (358)
+|+.+++||.+ +++++++++|+.++++.+. ++++++|||||++|+|+|..|+++|.+||++++.++++++.+++++
T Consensus 115 ~p~~p~i~G~~--~v~~~~~~~d~~~l~~~l~--~~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~ 190 (385)
T 3klj_A 115 IANKIKVPHAD--EIFSLYSYDDALKIKDECK--NKGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLERQLDRDG 190 (385)
T ss_dssp EECCCCCTTCS--CEECCSSHHHHHHHHHHHH--HHSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTTSCHHH
T ss_pred CcCCCCCCCCC--CeEEeCCHHHHHHHHHHhh--cCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHH
Confidence 56666789987 8999999999999998876 4789999999999999999999999999999999999998799999
Q ss_pred HHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChhhhhcc-cccccCcEEEecccc
Q 018320 86 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQ-LTLEKGGIKVTGRLQ 164 (358)
Q Consensus 86 ~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~-~~~~~g~i~vd~~~~ 164 (358)
.+.+.+.+++.||++++++.++++ |+++++|.||+++|++|++++++.. +..+ ++|.||++|+
T Consensus 191 ~~~~~~~l~~~gV~~~~~~~v~~i---------------g~~~~~D~vv~a~G~~p~~~~~~~~gl~~~-~gi~vd~~~~ 254 (385)
T 3klj_A 191 GLFLKDKLDRLGIKIYTNSNFEEM---------------GDLIRSSCVITAVGVKPNLDFIKDTEIASK-RGILVNDHME 254 (385)
T ss_dssp HHHHHHHHHTTTCEEECSCCGGGC---------------HHHHHHSEEEECCCEEECCGGGTTSCCCBS-SSEEECTTCB
T ss_pred HHHHHHHHHhCCCEEEeCCEEEEc---------------CeEEecCeEEECcCcccChhhhhhcCCCcC-CCEEECCCcc
Confidence 999999999999999999887665 5679999999999999999988764 5555 4599999999
Q ss_pred CCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCC-CCCeEEEEecCceEEEeecccce---
Q 018320 165 SSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFD-YLPFFYSRVFTLSWQFYGDNVGE--- 240 (358)
Q Consensus 165 t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~-~~p~~~~~~~~~~~~~~G~~~~~--- 240 (358)
|+.|+|||+|||+..+... ..++..|..||+.||.+|+|... ++. .+|++|+++|++.++++|.++++
T Consensus 255 t~~~~IyA~GD~a~~~~~~------~~~~~~A~~qg~~aa~~i~g~~~--~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 326 (385)
T 3klj_A 255 TSIKDIYACGDVAEFYGKN------PGLINIANKQGEVAGLNACGEDA--SYSEIIPSPILKVSGISIISCGDIENNKPS 326 (385)
T ss_dssp CSSTTEEECGGGEEETTBC------CCCHHHHHHHHHHHHHHHTTCCC--CCCCCCCCCEEEETTEEEEEESCCTTCCCS
T ss_pred cCCCCEEEEEeeEecCCCc------ccHHHHHHHHHHHHHHHhcCCCc--CCCCCCCcEEEEeCCCcEEEEcCCCCCCCe
Confidence 9999999999999876432 25788999999999999998763 444 47999999999999999987653
Q ss_pred EEEEccCCCCceEEEEeeCCeEEEEEEeCCCHHHHHHHHHHHHcCCCcccH
Q 018320 241 VVHYGNFSGTTFGAYWVNKGRLVGSFLEGGTKEEYEAIAKATRLQPVVEDL 291 (358)
Q Consensus 241 ~~~~g~~~~~~~~~~~~~~g~ilGa~~vg~~~~~~~~~a~ai~~~~~~~dl 291 (358)
.+.. +.....|.+++.++|+|+|++++|.. .....+..+|+++.++++|
T Consensus 327 ~~~~-~~~~~~~~~~~~~~~~l~g~~~~g~~-~~~~~~~~~i~~~~~~~~~ 375 (385)
T 3klj_A 327 KVFR-STQEDKYIVCMLKENKIDAAAVIGDV-SLGTKLKKAIDSSKSFDNI 375 (385)
T ss_dssp EEEE-EECSSCEEEEEEETTEEEEEEEESCH-HHHHHHHHHHHTTCBCSCC
T ss_pred EEEE-ECCCCeEEEEEEECCEEEEEEEECCc-HHHHHHHHHHHcCCCcccc
Confidence 3333 44455699999999999999999964 4445788999999999886
No 17
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=6.8e-37 Score=308.03 Aligned_cols=282 Identities=22% Similarity=0.291 Sum_probs=223.9
Q ss_pred CCccCCCCCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHH
Q 018320 6 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 85 (358)
Q Consensus 6 ~P~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~ 85 (358)
+|..+++||.+.+++++. +++. +.+...++++++|||+|++|+|+|..|.+.|.+||++++.+++++. +++++
T Consensus 185 ~p~~p~i~G~~~~~v~~~---~~~~---~~l~~~~g~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~-~~~~~ 257 (523)
T 1mo9_A 185 GPGTLDVPGVNAKGVFDH---ATLV---EELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI-KDNET 257 (523)
T ss_dssp ECCCCCSTTTTSBTEEEH---HHHH---HHCCSCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTC-CSHHH
T ss_pred CCCCCCCCCcccCcEeeH---HHHH---HHHHhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccccc-ccHHH
Confidence 455667899877778743 3332 1233323499999999999999999999999999999999999986 89999
Q ss_pred HHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcE--EEEEcCCCc-EEecCeEEEeeCCCCChh-hhhcc-ccc-ccCcEEE
Q 018320 86 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKV--VAVNLRDGN-RLPTDMVVVGIGIRPNTS-LFEGQ-LTL-EKGGIKV 159 (358)
Q Consensus 86 ~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v--~~v~~~~g~-~i~~D~vi~a~G~~p~~~-l~~~~-~~~-~~g~i~v 159 (358)
.+.+.+.+++.||+++++++|++++.++++.+ ..+++.+|+ ++++|.||+|+|++|+++ +++.. +.. ++|+|.|
T Consensus 258 ~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~~~l~~~gl~~~~~G~i~V 337 (523)
T 1mo9_A 258 RAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSAELAKILGLDLGPKGEVLV 337 (523)
T ss_dssp HHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECCHHHHHHHTCCBCTTSCBCC
T ss_pred HHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCCccCHHHcCCccCCCCCEEE
Confidence 99999999999999999999999987445543 357778887 899999999999999998 56543 666 5788999
Q ss_pred eccccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeecccc
Q 018320 160 TGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGDNVG 239 (358)
Q Consensus 160 d~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~ 239 (358)
|++|||+.|+|||+|||+..+ .++..|..||+.||.||+|......+..+|+++ +++..++++|+++.
T Consensus 338 d~~~~t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~--~~~~~~a~vG~~e~ 405 (523)
T 1mo9_A 338 NEYLQTSVPNVYAVGDLIGGP----------MEMFKARKSGCYAARNVMGEKISYTPKNYPDFL--HTHYEVSFLGMGEE 405 (523)
T ss_dssp CTTSBCSSTTEEECGGGGCSS----------CSHHHHHHHHHHHHHHHTTCCCCCCCCSCCEEE--ESSSEEEEEECCHH
T ss_pred CCCCccCCCCEEEEeecCCCc----------ccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEE--ECCCceEEEeCCHH
Confidence 999999999999999999754 356789999999999999865333466788754 57889999999875
Q ss_pred eEE-------EE----cc-----------------------CCCCceEEEEe--eCCeEEEEEEeCCCHHH-HHHHHHHH
Q 018320 240 EVV-------HY----GN-----------------------FSGTTFGAYWV--NKGRLVGSFLEGGTKEE-YEAIAKAT 282 (358)
Q Consensus 240 ~~~-------~~----g~-----------------------~~~~~~~~~~~--~~g~ilGa~~vg~~~~~-~~~~a~ai 282 (358)
++. .. .+ .+..+|.|++. ++|+|||+|++|+.+.+ ++.++.||
T Consensus 406 ~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai 485 (523)
T 1mo9_A 406 EARAAGHEIVTIKMPPDTENGLNVALPASDRTMLYAFGKGTAHMSGFQKIVIDAKTRKVLGAHHVGYGAKDAFQYLNVLI 485 (523)
T ss_dssp HHHHTTCCEEEEEESCCSTTTTCSSCSCCTTTHHHHHSTTTGGGGCEEEEEEETTTCBEEEEEEEESSCHHHHHHHHHHH
T ss_pred HHHhCCCCEEEEEEecccccccccccccccccccceEEeecCCCCEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHH
Confidence 421 11 11 11123777666 58999999999987554 68899999
Q ss_pred HcCCCcccHHHHhhcCCcccCCcCCC
Q 018320 283 RLQPVVEDLAELETQGLGFALAVSQK 308 (358)
Q Consensus 283 ~~~~~~~dl~~l~~~~~~yap~~~~~ 308 (358)
++++|++||.+++ .+.++|++++.
T Consensus 486 ~~~~t~~~l~~~~--~~~~~Pt~~e~ 509 (523)
T 1mo9_A 486 KQGLTVDELGDMD--ELFLNPTHFIQ 509 (523)
T ss_dssp HTTCBHHHHHTSC--CCSSCSCCHHH
T ss_pred HCCCCHHHHHhCC--cceECCCHHHH
Confidence 9999999998872 14677887765
No 18
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=5e-37 Score=305.25 Aligned_cols=278 Identities=22% Similarity=0.252 Sum_probs=219.0
Q ss_pred CCccCCCCCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHH
Q 018320 6 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 85 (358)
Q Consensus 6 ~P~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~ 85 (358)
+|..+++||.+..+++ +.+++.++ .. .+++++|||||++|+|+|..|++.|.+||++++.++++++.+++++
T Consensus 151 ~p~~p~i~g~~~~~v~---t~~~~~~~----~~-~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~ 222 (474)
T 1zmd_A 151 EVTPFPGITIDEDTIV---SSTGALSL----KK-VPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEI 222 (474)
T ss_dssp EECCCTTCCCCSSSEE---CHHHHTTC----SS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCSSCCHHH
T ss_pred CCCCCCCCCCCcCcEE---cHHHHhhc----cc-cCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCcccCHHH
Confidence 3555667887655665 34444332 11 4799999999999999999999999999999999999984489999
Q ss_pred HHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEE-----cCCCcEEecCeEEEeeCCCCChhh--hhc-cccc-ccCc
Q 018320 86 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVN-----LRDGNRLPTDMVVVGIGIRPNTSL--FEG-QLTL-EKGG 156 (358)
Q Consensus 86 ~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~-----~~~g~~i~~D~vi~a~G~~p~~~l--~~~-~~~~-~~g~ 156 (358)
.+.+.+.|+++||+++++++|++++.++++.+ .+. ..+++++++|.||+|+|++|++++ ++. ++.+ ++|+
T Consensus 223 ~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~ 301 (474)
T 1zmd_A 223 SKNFQRILQKQGFKFKLNTKVTGATKKSDGKI-DVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGR 301 (474)
T ss_dssp HHHHHHHHHHTTCEEECSEEEEEEEECTTSCE-EEEEEETTSCCCEEEEESEEEECSCEEECCTTSSHHHHTCCCCTTSC
T ss_pred HHHHHHHHHHCCCEEEeCceEEEEEEcCCceE-EEEEEecCCCCceEEEcCEEEECcCCCcCCCcCCchhcCCccCCCCC
Confidence 99999999999999999999999987444323 344 356778999999999999999986 443 3665 4688
Q ss_pred EEEeccccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeec
Q 018320 157 IKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGD 236 (358)
Q Consensus 157 i~vd~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~ 236 (358)
|.||++|||+.|+|||+|||+..+ .++..|..||+.||.||++......+..+|++ .+++..++++|+
T Consensus 302 i~vd~~~~t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~--~~~~~~~a~vG~ 369 (474)
T 1zmd_A 302 IPVNTRFQTKIPNIYAIGDVVAGP----------MLAHKAEDEGIICVEGMAGGAVHIDYNCVPSV--IYTHPEVAWVGK 369 (474)
T ss_dssp CCCCTTCBCSSTTEEECGGGSSSC----------CCHHHHHHHHHHHHHHHTTCCCCCCGGGCCEE--ECSSSEEEEEEC
T ss_pred EEECcCCccCCCCEEEeeecCCCC----------ccHHHHHHHHHHHHHHhcCCCCcCCCCCCCEE--EECCCCeEEEeC
Confidence 999999999999999999999754 35778999999999999986533345567764 478899999999
Q ss_pred ccceEE-------EEc-----------cCCCCceEEEEee--CCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcccHHHHh
Q 018320 237 NVGEVV-------HYG-----------NFSGTTFGAYWVN--KGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAELE 295 (358)
Q Consensus 237 ~~~~~~-------~~g-----------~~~~~~~~~~~~~--~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l~ 295 (358)
++.++. ... ..+..+|.+++.+ +|+|+|+|++|+.+.+ ++.++.||++++|++||.++.
T Consensus 370 ~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~ 449 (474)
T 1zmd_A 370 SEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVC 449 (474)
T ss_dssp CHHHHHHHTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHHSC
T ss_pred CHHHHHhcCCCEEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCc
Confidence 876431 110 1122358787764 8999999999988655 678899999999999998755
Q ss_pred hcCCcccCCcCCC
Q 018320 296 TQGLGFALAVSQK 308 (358)
Q Consensus 296 ~~~~~yap~~~~~ 308 (358)
.++|++++.
T Consensus 450 ----~~~Pt~~e~ 458 (474)
T 1zmd_A 450 ----HAHPTLSEA 458 (474)
T ss_dssp ----CCTTCTHHH
T ss_pred ----CCCCCHHHH
Confidence 566887765
No 19
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=2.7e-37 Score=307.99 Aligned_cols=250 Identities=17% Similarity=0.217 Sum_probs=206.1
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEE
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVA 119 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~ 119 (358)
.+++++|||||++|+|+|..|+++|.+||++++.+++++. +++++.+.+.+.|+++||+++++++|++++.++++ ..
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~--~~ 260 (482)
T 1ojt_A 184 VPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQG-ADRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDG--VY 260 (482)
T ss_dssp CCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-SCHHHHHHHHHHHGGGEEEEECSCEEEEEEEETTE--EE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc-cCHHHHHHHHHHHHhcCCEEEECCEEEEEEEcCCe--EE
Confidence 4799999999999999999999999999999999999986 89999999999999999999999999999864333 35
Q ss_pred EEcCC----CcEEecCeEEEeeCCCCChhhh--hcc-ccc-ccCcEEEeccccCCCCcEEEEcccccccccccCcccccc
Q 018320 120 VNLRD----GNRLPTDMVVVGIGIRPNTSLF--EGQ-LTL-EKGGIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLE 191 (358)
Q Consensus 120 v~~~~----g~~i~~D~vi~a~G~~p~~~l~--~~~-~~~-~~g~i~vd~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~ 191 (358)
+++.+ |+++++|.|++|+|++|+++++ +.. +.. ++|+|.||++|||+.|+|||+|||+..+ .
T Consensus 261 v~~~~~~~~g~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~----------~ 330 (482)
T 1ojt_A 261 VTFEGANAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEVDKQMRTNVPHIYAIGDIVGQP----------M 330 (482)
T ss_dssp EEEESSSCCSSCEEESCEEECCCEEECGGGTTGGGTTCCCCTTSCCCCCTTSBCSSTTEEECGGGTCSS----------C
T ss_pred EEEeccCCCceEEEcCEEEECcCCCcCCCCCChhhcCceeCCCCCEeeCCCcccCCCCEEEEEcccCCC----------c
Confidence 66666 7789999999999999999873 433 666 4588999999999999999999999753 3
Q ss_pred cHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeecccceEE------EEc------------cCCCCceE
Q 018320 192 HVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGDNVGEVV------HYG------------NFSGTTFG 253 (358)
Q Consensus 192 ~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~~~~------~~g------------~~~~~~~~ 253 (358)
++..|..||+.||.||++......+..+| +..+++..++++|+++.++. ..+ ..+..+|.
T Consensus 331 l~~~A~~~g~~aa~~i~g~~~~~~~~~~p--~~~~~~~~~a~vG~te~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (482)
T 1ojt_A 331 LAHKAVHEGHVAAENCAGHKAYFDARVIP--GVAYTSPEVAWVGETELSAKASARKITKANFPWAASGRAIANGCDKPFT 408 (482)
T ss_dssp CHHHHHHHHHHHHHHHTTCCCCCCCCCCC--EEECSSSCEEEEECCHHHHHHHTCCEEEEEEEGGGCHHHHHTTCCSCEE
T ss_pred cHHHHHHHHHHHHHHHcCCCccCCCCCCC--EEEEcCCCeEEEeCCHHHHHhcCCCEEEEEEEcCcchHHhhcCCCcEEE
Confidence 57789999999999999865333455566 45678999999999875421 111 01223587
Q ss_pred EEEe--eCCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcccHHHHhhcCCcccCCcCCC
Q 018320 254 AYWV--NKGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAELETQGLGFALAVSQK 308 (358)
Q Consensus 254 ~~~~--~~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l~~~~~~yap~~~~~ 308 (358)
+++. ++|+|+|+|++|+.+.+ ++.++.||++++|++||.++. .++|++++.
T Consensus 409 k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~----~~~Pt~~e~ 462 (482)
T 1ojt_A 409 KLIFDAETGRIIGGGIVGPNGGDMIGEVCLAIEMGCDAADIGKTI----HPHPTLGES 462 (482)
T ss_dssp EEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSC----CCSSSSTTH
T ss_pred EEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCc----cCCCCHHHH
Confidence 8776 68999999999988655 678899999999999998765 688888865
No 20
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=2.6e-37 Score=309.30 Aligned_cols=276 Identities=20% Similarity=0.223 Sum_probs=220.3
Q ss_pred CCccCCCCCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHH
Q 018320 6 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 85 (358)
Q Consensus 6 ~P~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~ 85 (358)
+|..+++||.+..++++..+..+ + . ..+++++|||+|++|+|+|..|.+.|.+||++++.+++++. +++++
T Consensus 155 ~p~~p~i~g~~~~~v~~~~~~~~---~----~-~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~ 225 (499)
T 1xdi_A 155 SPRILPSAQPDGERILTWRQLYD---L----D-ALPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPY-EDADA 225 (499)
T ss_dssp EECCCGGGCCCSSSEEEGGGGGG---C----S-SCCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCC-SSHHH
T ss_pred CCCCCCCCCCCcCcEEehhHhhh---h----h-ccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc-cCHHH
Confidence 34555678877667776544322 1 1 14799999999999999999999999999999999999997 89999
Q ss_pred HHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChhh--hhc-cccc-ccCcEEEec
Q 018320 86 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSL--FEG-QLTL-EKGGIKVTG 161 (358)
Q Consensus 86 ~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l--~~~-~~~~-~~g~i~vd~ 161 (358)
.+.+.+.+++.||+++++++|++++.++++ + .+++.+|+++++|.||+|+|++|++++ ++. ++.+ ++|+|.||+
T Consensus 226 ~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~-v-~v~~~~g~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~ 303 (499)
T 1xdi_A 226 ALVLEESFAERGVRLFKNARAASVTRTGAG-V-LVTMTDGRTVEGSHALMTIGSVPNTSGLGLERVGIQLGRGNYLTVDR 303 (499)
T ss_dssp HHHHHHHHHHTTCEEETTCCEEEEEECSSS-E-EEEETTSCEEEESEEEECCCEEECCSSSCTTTTTCCCBTTTBCCCCS
T ss_pred HHHHHHHHHHCCCEEEeCCEEEEEEEeCCE-E-EEEECCCcEEEcCEEEECCCCCcCCCcCCchhcCceECCCCCEEECC
Confidence 999999999999999999999999874333 3 567788889999999999999999987 444 3665 458899999
Q ss_pred cccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCCC-CCCCCCCCCeEEEEecCceEEEeecccce
Q 018320 162 RLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPD-KTDKFDYLPFFYSRVFTLSWQFYGDNVGE 240 (358)
Q Consensus 162 ~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~p~~~~~~~~~~~~~~G~~~~~ 240 (358)
+|||+.|+|||+|||+..+ .++..|..||+.||.+|+|.. ....+..+|+ ..+++..++++|+++.+
T Consensus 304 ~~~t~~~~IyA~GD~~~~~----------~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~--~~~~~~~~a~vG~~e~~ 371 (499)
T 1xdi_A 304 VSRTLATGIYAAGDCTGLL----------PLASVAAMQGRIAMYHALGEGVSPIRLRTVAA--TVFTRPEIAAVGVPQSV 371 (499)
T ss_dssp SSBCSSTTEEECSGGGTSC----------SCHHHHHHHHHHHHHHHTTCCCCCCCGGGCEE--EECSSSEEEEEESCHHH
T ss_pred CcccCCCCEEEEeccCCCc----------ccHHHHHHHHHHHHHHhcCCCCccCCCCCCcE--EEEecCCceEeCCCHHH
Confidence 9999999999999999754 356789999999999999863 2234555665 45788999999998764
Q ss_pred EEEEc------------------cCCCCceEEEEee--CCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcccHHHHhhcCC
Q 018320 241 VVHYG------------------NFSGTTFGAYWVN--KGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAELETQGL 299 (358)
Q Consensus 241 ~~~~g------------------~~~~~~~~~~~~~--~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l~~~~~ 299 (358)
+...| ..+..+|.|++.+ +|+|+|++++|+.+.+ ++.++.||++++|++||.++.
T Consensus 372 a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~---- 447 (499)
T 1xdi_A 372 IDAGSVAARTIMLPLRTNARAKMSEMRHGFVKIFCRRSTGVVIGGVVVAPIASELILPIAVAVQNRITVNELAQTL---- 447 (499)
T ss_dssp HHHTSSCEEEEEEESTTSHHHHHTTCSSCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHTSB----
T ss_pred HHhCCCCEEEEEEecCcccceeecCCCceEEEEEEECCCCEEEEEEEECCchHHHHHHHHHHHHCCCCHHHHhccc----
Confidence 31110 1122357777764 7999999999998665 678899999999999998755
Q ss_pred cccCCcCCC
Q 018320 300 GFALAVSQK 308 (358)
Q Consensus 300 ~yap~~~~~ 308 (358)
.++|++++.
T Consensus 448 ~~~Pt~~e~ 456 (499)
T 1xdi_A 448 AVYPSLSGS 456 (499)
T ss_dssp CCSSSTHHH
T ss_pred ccCCCchHH
Confidence 566888775
No 21
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=3.9e-37 Score=305.23 Aligned_cols=274 Identities=20% Similarity=0.233 Sum_probs=215.1
Q ss_pred CccCCCCCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHHH
Q 018320 7 LEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIA 86 (358)
Q Consensus 7 P~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~~ 86 (358)
|..++++|.+.. + .+.+++..+. ..+++++|||||++|+|+|..|+++|.+||++++.+++++. +++++.
T Consensus 146 ~~~~~~~g~~~~-~---~~~~~~~~~~-----~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~ 215 (464)
T 2a8x_A 146 TRLVPGTSLSAN-V---VTYEEQILSR-----ELPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPN-EDADVS 215 (464)
T ss_dssp ECCCTTCCCBTT-E---ECHHHHHTCS-----SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHH
T ss_pred CCCCCCCCCCce-E---EecHHHhhcc-----ccCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccccc-cCHHHH
Confidence 444556776533 3 3555554432 14799999999999999999999999999999999999996 899999
Q ss_pred HHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcC-CC--cEEecCeEEEeeCCCCChhh--hhc-cccc-ccCcEEE
Q 018320 87 SYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLR-DG--NRLPTDMVVVGIGIRPNTSL--FEG-QLTL-EKGGIKV 159 (358)
Q Consensus 87 ~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~-~g--~~i~~D~vi~a~G~~p~~~l--~~~-~~~~-~~g~i~v 159 (358)
+.+.+.|+++||++++++++++++.++++ + .+.+. +| +++++|.|++|+|++|++++ ++. ++.. ++|+|.|
T Consensus 216 ~~l~~~l~~~gv~i~~~~~v~~i~~~~~~-~-~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~v 293 (464)
T 2a8x_A 216 KEIEKQFKKLGVTILTATKVESIADGGSQ-V-TVTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKAIGV 293 (464)
T ss_dssp HHHHHHHHHHTCEEECSCEEEEEEECSSC-E-EEEEESSSCEEEEEESEEEECSCEEECCSSSCHHHHTCCBCTTSSBCC
T ss_pred HHHHHHHHHcCCEEEeCcEEEEEEEcCCe-E-EEEEEcCCceEEEEcCEEEECCCCCccCCCCCchhcCCccCCCCCEeE
Confidence 99999999999999999999999864333 2 35543 56 67999999999999999987 443 3665 4688999
Q ss_pred eccccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcC-CCCC-CCCCCCCeEEEEecCceEEEeecc
Q 018320 160 TGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIME-PDKT-DKFDYLPFFYSRVFTLSWQFYGDN 237 (358)
Q Consensus 160 d~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g-~~~~-~~~~~~p~~~~~~~~~~~~~~G~~ 237 (358)
|++|||+.|+|||+|||+..+ .++..|..||+.||.||++ .... ..+..+|+ ..+++..++++|++
T Consensus 294 d~~~~t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~p~--~~~~~~~~a~vG~~ 361 (464)
T 2a8x_A 294 DDYMRTNVGHIYAIGDVNGLL----------QLAHVAEAQGVVAAETIAGAETLTLGDHRMLPR--ATFCQPNVASFGLT 361 (464)
T ss_dssp CTTSBCSSTTEEECGGGGCSS----------CSHHHHHHHHHHHHHHHHTCCCCCCCCGGGSCE--EECSSSEEEEEECC
T ss_pred CcCCccCCCCEEEeECcCCCc----------cCHHHHHHHHHHHHHHhcCCCCcccCCCCCCCE--EEECCCCeEEEcCC
Confidence 999999999999999999753 3577899999999999998 4432 23455675 46788999999998
Q ss_pred cceEE------EEc------------cCCCCceEEEEe--eCCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcccHHHHhh
Q 018320 238 VGEVV------HYG------------NFSGTTFGAYWV--NKGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAELET 296 (358)
Q Consensus 238 ~~~~~------~~g------------~~~~~~~~~~~~--~~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l~~ 296 (358)
+.++. ..+ ..+..+|.|++. ++|+|+|+|++|+.+.+ ++.++.||++++|++||.++.
T Consensus 362 e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~- 440 (464)
T 2a8x_A 362 EQQARNEGYDVVVAKFPFTANAKAHGVGDPSGFVKLVADAKHGELLGGHLVGHDVAELLPELTLAQRWDLTASELARNV- 440 (464)
T ss_dssp HHHHHHTTCCEEEEEEEGGGCHHHHHHTCCCCEEEEEEETTTTEEEEEEEEETTGGGGHHHHHHHHHTTCBHHHHTTSC-
T ss_pred HHHHHhcCCCEEEEEEEcchhhhhhhcCCCcEEEEEEEECCCCEEEEEEEECcCHHHHHHHHHHHHHCCCCHHHHhhCc-
Confidence 75421 110 012235877776 48999999999987654 688899999999999998755
Q ss_pred cCCcccCCcCCC
Q 018320 297 QGLGFALAVSQK 308 (358)
Q Consensus 297 ~~~~yap~~~~~ 308 (358)
.++|++++.
T Consensus 441 ---~~~Pt~~e~ 449 (464)
T 2a8x_A 441 ---HTHPTMSEA 449 (464)
T ss_dssp ---CCTTCTTHH
T ss_pred ---cCCCChHHH
Confidence 566888765
No 22
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=1.4e-36 Score=301.58 Aligned_cols=276 Identities=20% Similarity=0.245 Sum_probs=216.7
Q ss_pred CCccCCCCCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHH
Q 018320 6 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 85 (358)
Q Consensus 6 ~P~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~ 85 (358)
+|..++++|.+.++++ +.+++..+. ..+++++|||+|++|+|+|..|++.|.+||++++.+++++. +|+++
T Consensus 147 ~p~~p~~~g~~~~~v~---t~~~~~~~~-----~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~ 217 (468)
T 2qae_A 147 EPTELPFLPFDEKVVL---SSTGALALP-----RVPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPT-LDEDV 217 (468)
T ss_dssp EECCBTTBCCCSSSEE---CHHHHHTCS-----SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHH
T ss_pred CcCCCCCCCCCcCcee---chHHHhhcc-----cCCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccccc-CCHHH
Confidence 3555567777655665 445554332 14799999999999999999999999999999999999986 89999
Q ss_pred HHHHHHHH-HhCCCEEEcCCeeeEEEEcCCCcEEEEEcC--CC--cEEecCeEEEeeCCCCChhh--hhc-cccc-ccCc
Q 018320 86 ASYYEEYY-KSKGVKFVKGTVLSSFDVDSNGKVVAVNLR--DG--NRLPTDMVVVGIGIRPNTSL--FEG-QLTL-EKGG 156 (358)
Q Consensus 86 ~~~~~~~l-~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~--~g--~~i~~D~vi~a~G~~p~~~l--~~~-~~~~-~~g~ 156 (358)
.+.+.+.| +++||+++++++|++++.++++ ..+.+. +| +++++|.|++|+|++|++++ ++. ++.. ++|+
T Consensus 218 ~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~gl~~~~~G~ 295 (468)
T 2qae_A 218 TNALVGALAKNEKMKFMTSTKVVGGTNNGDS--VSLEVEGKNGKRETVTCEALLVSVGRRPFTGGLGLDKINVAKNERGF 295 (468)
T ss_dssp HHHHHHHHHHHTCCEEECSCEEEEEEECSSS--EEEEEECC---EEEEEESEEEECSCEEECCTTSCHHHHTCCBCTTSC
T ss_pred HHHHHHHHhhcCCcEEEeCCEEEEEEEcCCe--EEEEEEcCCCceEEEECCEEEECCCcccCCCCCCchhcCCccCCCCC
Confidence 99999999 9999999999999999874433 234544 66 67999999999999999987 443 3665 4688
Q ss_pred EEEeccccCCCCcEEEEccccc-ccccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEee
Q 018320 157 IKVTGRLQSSNSSVYAVGDVAA-FPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYG 235 (358)
Q Consensus 157 i~vd~~~~t~~~~VyAiGD~~~-~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G 235 (358)
|.||++|||+.|+|||+|||+. .+ .++..|..||+.||.+|++......+..+|+ ..+++..++++|
T Consensus 296 i~vd~~~~t~~~~IyA~GD~~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~--~~~~~~~~a~vG 363 (468)
T 2qae_A 296 VKIGDHFETSIPDVYAIGDVVDKGP----------MLAHKAEDEGVACAEILAGKPGHVNYGVIPA--VIYTMPEVASVG 363 (468)
T ss_dssp BCCCTTSBCSSTTEEECGGGBSSSC----------SCHHHHHHHHHHHHHHHTTCCCCCCTTSCCE--EECSSSEEEEEE
T ss_pred EeECCCcccCCCCEEEeeccCCCCC----------ccHhHHHHHHHHHHHHHcCCCccCCCCCCCE--EEECCCceEEEe
Confidence 9999999999999999999998 33 3577899999999999998653334555664 567889999999
Q ss_pred cccceEE------EEc------------cCCCCceEEEEee--CCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcccHHHH
Q 018320 236 DNVGEVV------HYG------------NFSGTTFGAYWVN--KGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAEL 294 (358)
Q Consensus 236 ~~~~~~~------~~g------------~~~~~~~~~~~~~--~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l 294 (358)
+++.++. ..+ ..+..+|.|++.+ +|+|+|+|++|+.+.+ ++.++.||++++|++||.++
T Consensus 364 ~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~ 443 (468)
T 2qae_A 364 KSEDELKKEGVAYKVGKFPFNANSRAKAVSTEDGFVKVLVDKATDRILGVHIVCTTAGELIGEACLAMEYGASSEDVGRT 443 (468)
T ss_dssp CCHHHHHHTTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTS
T ss_pred CCHHHHHhcCCCEEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhc
Confidence 9875431 110 1122358777764 8999999999988655 67889999999999999875
Q ss_pred hhcCCcccCCcCCC
Q 018320 295 ETQGLGFALAVSQK 308 (358)
Q Consensus 295 ~~~~~~yap~~~~~ 308 (358)
. .++|++++.
T Consensus 444 ~----~~~Pt~~e~ 453 (468)
T 2qae_A 444 C----HAHPTMSEA 453 (468)
T ss_dssp C----CCSSCTHHH
T ss_pred c----cCCCCHHHH
Confidence 5 566887764
No 23
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-36 Score=303.35 Aligned_cols=276 Identities=16% Similarity=0.202 Sum_probs=216.7
Q ss_pred CCccC-CCCCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHH
Q 018320 6 KLEEF-GLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPK 84 (358)
Q Consensus 6 ~P~~~-~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~ 84 (358)
+|..+ ++||.+ .++ +.+++..+ . ..+++++|||||++|+|+|..|+++|.+||++++.+++++. +|++
T Consensus 159 ~p~~p~~i~g~~--~~~---~~~~~~~l----~-~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~ 227 (479)
T 2hqm_A 159 KAIFPENIPGFE--LGT---DSDGFFRL----E-EQPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRK-FDEC 227 (479)
T ss_dssp EECCCTTSTTGG--GSB---CHHHHHHC----S-SCCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-SCHH
T ss_pred CCCCCCCCCCcc--ccc---chHHHhcc----c-ccCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccccc-cCHH
Confidence 34555 678764 232 34444332 1 25799999999999999999999999999999999999986 8999
Q ss_pred HHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCC-cEEecCeEEEeeCCCCChhh-hhc-cccc-ccCcEEEe
Q 018320 85 IASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDG-NRLPTDMVVVGIGIRPNTSL-FEG-QLTL-EKGGIKVT 160 (358)
Q Consensus 85 ~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g-~~i~~D~vi~a~G~~p~~~l-~~~-~~~~-~~g~i~vd 160 (358)
+.+.+.+.|++.||+++++++|++++.++++....+.+.+| +++++|.||+|+|++|++.+ ++. ++.. ++|+|.||
T Consensus 228 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~l~l~~~gl~~~~~G~i~vd 307 (479)
T 2hqm_A 228 IQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHLGMGSENVGIKLNSHDQIIAD 307 (479)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECCCSSGGGGTCCBCTTSCBCCC
T ss_pred HHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCccccChhhcCceECCCCCEeEC
Confidence 99999999999999999999999998744443346778888 78999999999999999966 444 3666 57899999
Q ss_pred ccccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCCC---C-CCCCCCCCeEEEEecCceEEEeec
Q 018320 161 GRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPD---K-TDKFDYLPFFYSRVFTLSWQFYGD 236 (358)
Q Consensus 161 ~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~---~-~~~~~~~p~~~~~~~~~~~~~~G~ 236 (358)
++|+|+.|+|||+|||+..+ .++..|.+||+.||.||++.. . ..++..+|+. .+++..++++|+
T Consensus 308 ~~~~t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~p~~--~~~~~~~~~vGl 375 (479)
T 2hqm_A 308 EYQNTNVPNIYSLGDVVGKV----------ELTPVAIAAGRKLSNRLFGPEKFRNDKLDYENVPSV--IFSHPEAGSIGI 375 (479)
T ss_dssp TTCBCSSTTEEECGGGTTSS----------CCHHHHHHHHHHHHHHHHSCGGGTTCCCCCTTCCEE--ECCSSCEEEEEC
T ss_pred CCCccCCCCEEEEEecCCCc----------ccHHHHHHHHHHHHHHhcCCCccCcccCCCCCCCeE--EECCCCeEEEeC
Confidence 99999999999999997643 367789999999999999754 2 1344556754 356788999998
Q ss_pred ccceEEE--------Ec------------cCCCCceEEEEe--eCCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcccHHH
Q 018320 237 NVGEVVH--------YG------------NFSGTTFGAYWV--NKGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAE 293 (358)
Q Consensus 237 ~~~~~~~--------~g------------~~~~~~~~~~~~--~~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~ 293 (358)
++.++.. .. .....+|.|+.. ++|+|||+|++|+.+.+ ++.++.||++++|++||.+
T Consensus 376 ~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~ 455 (479)
T 2hqm_A 376 SEKEAIEKYGKENIKVYNSKFTAMYYAMLSEKSPTRYKIVCAGPNEKVVGLHIVGDSSAEILQGFGVAIKMGATKADFDN 455 (479)
T ss_dssp CHHHHHHHHCGGGEEEEEEEECCGGGGGCSSCCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHT
T ss_pred CHHHHHhcCCCCcEEEEEEeccHHHHHhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhh
Confidence 8654321 11 111234777665 47999999999988665 5778999999999999987
Q ss_pred HhhcCCcccCCcCCC
Q 018320 294 LETQGLGFALAVSQK 308 (358)
Q Consensus 294 l~~~~~~yap~~~~~ 308 (358)
+. .++|++++.
T Consensus 456 ~~----~~hPt~~e~ 466 (479)
T 2hqm_A 456 CV----AIHPTSAEE 466 (479)
T ss_dssp SC----CCSSCSGGG
T ss_pred Cc----CCCCChHHH
Confidence 65 678888876
No 24
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=100.00 E-value=1.7e-37 Score=312.52 Aligned_cols=250 Identities=20% Similarity=0.275 Sum_probs=194.6
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEE
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVA 119 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~ 119 (358)
.|++++|||||+||+|+|..|+++|.+||++++ +++++. +|+++++.+.+.|+++||++++++.+++++..++ . ..
T Consensus 222 lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~-~~~L~~-~D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~-~-~~ 297 (542)
T 4b1b_A 222 DPGKTLVVGASYVALECSGFLNSLGYDVTVAVR-SIVLRG-FDQQCAVKVKLYMEEQGVMFKNGILPKKLTKMDD-K-IL 297 (542)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEES-SCSSTT-SCHHHHHHHHHHHHHTTCEEEETCCEEEEEEETT-E-EE
T ss_pred CCceEEEECCCHHHHHHHHHHHhcCCeEEEecc-cccccc-cchhHHHHHHHHHHhhcceeecceEEEEEEecCC-e-EE
Confidence 589999999999999999999999999999987 467776 8999999999999999999999999999987433 3 45
Q ss_pred EEcCCCcEEecCeEEEeeCCCCChhhhhc---cccc-cc-CcEEEeccccCCCCcEEEEcccccccccccCcccccccHH
Q 018320 120 VNLRDGNRLPTDMVVVGIGIRPNTSLFEG---QLTL-EK-GGIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVD 194 (358)
Q Consensus 120 v~~~~g~~i~~D~vi~a~G~~p~~~l~~~---~~~~-~~-g~i~vd~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~ 194 (358)
+.+.++.++.+|.|++|+|++||++.+.. .+.. .+ +.|.+|++|||++|+|||+|||+.... .+..
T Consensus 298 v~~~~~~~~~~D~vLvAvGR~Pnt~~L~le~~gv~~~~~~~~i~vd~~~~Ts~p~IyAiGDv~~~~p---------~La~ 368 (542)
T 4b1b_A 298 VEFSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHLSCTNIPSIFAVGDVAENVP---------ELAP 368 (542)
T ss_dssp EEETTSCEEEESEEEECSCEEESCGGGCGGGTTCCEETTTTEECCCTTSBCSSTTEEECTTSBTTCC---------CCHH
T ss_pred EEEcCCCeEEEEEEEEcccccCCccccCcccceeeecccCceEeccccccccCCCeEEeccccCCch---------hHHH
Confidence 77888899999999999999999987642 2444 33 446889999999999999999996531 3577
Q ss_pred HHHHHHHHHHHHHcCCCCC-CCCCCCCeEEEEecCceEEEeecccceEEEEcc---------------------------
Q 018320 195 SARKSAKHAVAAIMEPDKT-DKFDYLPFFYSRVFTLSWQFYGDNVGEVVHYGN--------------------------- 246 (358)
Q Consensus 195 ~A~~~g~~aa~~i~g~~~~-~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~~g~--------------------------- 246 (358)
.|.+||++++++|++.... .++..+|+.+ ++++.++++|+++.++...+.
T Consensus 369 ~A~~eg~~aa~~i~g~~~~~~d~~~iP~~v--ft~PeiA~VGlTE~eA~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 446 (542)
T 4b1b_A 369 VAIKAGEILARRLFKDSDEIMDYSYIPTSI--YTPIEYGACGYSEEKAYELYGKSNVEVFLQEFNNLEISAVHRQKHIRA 446 (542)
T ss_dssp HHHHHHHHHHHHHHSCCCCCCCCSSCCEEE--CSSSCEEEEECCHHHHHHHHCTTTEEEEEC------------------
T ss_pred HHHHHHHHHHHHHhcCCCcccCCCCCceEE--eCCCCeEEEeCCHHHHHHhCCCCcEEEEEeeccchhhhhhhhhhhhhc
Confidence 8999999999999986543 4567788644 678889999999865421110
Q ss_pred --------CCCCceEEEEe---eCCeEEEEEEeCCCHHHH-HHHHHHHHcCCCcccHHHHhhcCCcccCCcCCC
Q 018320 247 --------FSGTTFGAYWV---NKGRLVGSFLEGGTKEEY-EAIAKATRLQPVVEDLAELETQGLGFALAVSQK 308 (358)
Q Consensus 247 --------~~~~~~~~~~~---~~g~ilGa~~vg~~~~~~-~~~a~ai~~~~~~~dl~~l~~~~~~yap~~~~~ 308 (358)
.+..+|.|+.. ++++|||+|++|+++.++ ..++.||++++|++||.++. ..+|.++++
T Consensus 447 ~~~~~~~~~~~~g~vKli~~~~~t~~ILGa~ivG~~A~ElI~~~alAi~~~~t~~dl~~~i----~~HPTlsE~ 516 (542)
T 4b1b_A 447 QKDEYDLDVSSTCLAKLVCLKNEDNRVIGFHYVGPNAGEVTQGMALALRLKVKKKDFDNCI----GIHPTDAES 516 (542)
T ss_dssp -----------CCCEEEEEETTTTTBEEEEEEESTTHHHHHHHHHHHHHTCCBHHHHHHC--------------
T ss_pred ccccccccCCCceEEEEEEEeCCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhccC----CcCCCHHHH
Confidence 01123556543 579999999999987765 67899999999999999876 456777776
No 25
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=1.4e-36 Score=303.88 Aligned_cols=275 Identities=17% Similarity=0.242 Sum_probs=218.0
Q ss_pred CCccCCCCCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhC---CCcEEEEeeCCcccCccCC
Q 018320 6 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVIN---KINVTMVFPEAHCMARLFT 82 (358)
Q Consensus 6 ~P~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~---g~~Vtlv~~~~~~l~~~~~ 82 (358)
+|..+++||.+ .++ +.+++..+ . ..+++++|||+|++|+|+|..|+++ |.+||++++.+++++. +|
T Consensus 166 ~p~~p~i~G~~--~~~---~~~~~~~~----~-~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~-~d 234 (495)
T 2wpf_A 166 WPQMPAIPGIE--HCI---SSNEAFYL----P-EPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRG-FD 234 (495)
T ss_dssp EECCCCCTTGG--GCE---EHHHHTTC----S-SCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTT-SC
T ss_pred CcCCCCCCCcc--ccc---cHHHHHhh----h-hcCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccc-cC
Confidence 35555688874 344 33443332 1 2478999999999999999999999 9999999999999986 89
Q ss_pred HHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChhhh--hc-cccc-ccCcEE
Q 018320 83 PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLF--EG-QLTL-EKGGIK 158 (358)
Q Consensus 83 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~--~~-~~~~-~~g~i~ 158 (358)
+++.+.+.+.|+++||+++++++|++++.++++. ..+++.+|+++++|.||+|+|++|+++++ +. ++.+ ++|+|.
T Consensus 235 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~-~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~i~ 313 (495)
T 2wpf_A 235 ETIREEVTKQLTANGIEIMTNENPAKVSLNTDGS-KHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQ 313 (495)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSC-EEEEETTSCEEEESEEEECSCEEECCGGGTGGGTTCCBCTTSSBC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCce-EEEEECCCcEEEcCEEEECCCCcccccccchhhcCccCCCCCCEE
Confidence 9999999999999999999999999998743333 45778899999999999999999999843 33 3555 478899
Q ss_pred EeccccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCCCC-CCCCCCCCeEEEEecCceEEEeecc
Q 018320 159 VTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDK-TDKFDYLPFFYSRVFTLSWQFYGDN 237 (358)
Q Consensus 159 vd~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~-~~~~~~~p~~~~~~~~~~~~~~G~~ 237 (358)
||++|||+.|+|||+|||+..+ .++..|..||+.||.||++... ...+..+| +..+++..++++|++
T Consensus 314 Vd~~~~t~~~~IyA~GD~~~~~----------~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p--~~~~~~~~~a~vGl~ 381 (495)
T 2wpf_A 314 VDEFSRTNVPNIYAIGDITDRL----------MLTPVAINEGAALVDTVFGNKPRKTDHTRVA--SAVFSIPPIGTCGLI 381 (495)
T ss_dssp CCTTCBCSSTTEEECGGGGCSC----------CCHHHHHHHHHHHHHHHHSSCCCCCCCSSCE--EEECCSSCEEEEECC
T ss_pred ECCCCccCCCCEEEEeccCCCc----------cCHHHHHHHHHHHHHHhcCCCCCcCCCCCCC--EEEECCCCeEEEeCC
Confidence 9999999999999999999642 4678899999999999998542 13444455 455678999999998
Q ss_pred cceEE------EEc------------cCCCCce-EEEEee--CCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcccHHHHh
Q 018320 238 VGEVV------HYG------------NFSGTTF-GAYWVN--KGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAELE 295 (358)
Q Consensus 238 ~~~~~------~~g------------~~~~~~~-~~~~~~--~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l~ 295 (358)
+.++. ... ..+..+| .|+.++ +|+|||+|++|+.+.+ ++.++.||++++|++||.++.
T Consensus 382 e~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~klv~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~ 461 (495)
T 2wpf_A 382 EEVAAKEFEKVAVYMSSFTPLMHNISGSKYKKFVAKIVTNHSDGTVLGVHLLGDGAPEIIQAVGVCLRLNAKISDFYNTI 461 (495)
T ss_dssp HHHHHHHSSEEEEEEEEECCTHHHHHSCTTCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSC
T ss_pred HHHHHhcCCCEEEEEEecCchhhhhhcCCCcEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcc
Confidence 75431 110 1123458 887764 8999999999988655 678899999999999998754
Q ss_pred hcCCcccCCcCCC
Q 018320 296 TQGLGFALAVSQK 308 (358)
Q Consensus 296 ~~~~~yap~~~~~ 308 (358)
.++|++++.
T Consensus 462 ----~~hPt~~e~ 470 (495)
T 2wpf_A 462 ----GVHPTSAEE 470 (495)
T ss_dssp ----CCSSCSGGG
T ss_pred ----cCCCChHHH
Confidence 788888886
No 26
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1e-36 Score=301.56 Aligned_cols=275 Identities=21% Similarity=0.258 Sum_probs=214.8
Q ss_pred CCccCCCCCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHH
Q 018320 6 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 85 (358)
Q Consensus 6 ~P~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~ 85 (358)
+|..++++|.+.. ++ +..++.++. ..+++++|||||++|+|+|..|+++|.+||++++.+++++. +++++
T Consensus 144 ~p~~~~~~g~~~~-v~---~~~~~~~~~-----~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~ 213 (455)
T 1ebd_A 144 RPIELPNFKFSNR-IL---DSTGALNLG-----EVPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSG-FEKQM 213 (455)
T ss_dssp EECCBTTBCCCSS-EE---CHHHHHTCS-----SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-SCHHH
T ss_pred CCCCCCCCCccce-Ee---cHHHHhccc-----cCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc-cCHHH
Confidence 3444556776532 33 455544321 14799999999999999999999999999999999999986 89999
Q ss_pred HHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcC---CCcEEecCeEEEeeCCCCChhh--hhc-cccc-ccCcEE
Q 018320 86 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLR---DGNRLPTDMVVVGIGIRPNTSL--FEG-QLTL-EKGGIK 158 (358)
Q Consensus 86 ~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~---~g~~i~~D~vi~a~G~~p~~~l--~~~-~~~~-~~g~i~ 158 (358)
.+.+.+.|++.||+++++++|++++.++++ ..+.+. +++++++|.|++|+|++|++++ ++. .+.. ++|+|.
T Consensus 214 ~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~ 291 (455)
T 1ebd_A 214 AAIIKKRLKKKGVEVVTNALAKGAEEREDG--VTVTYEANGETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIE 291 (455)
T ss_dssp HHHHHHHHHHTTCEEEESEEEEEEEEETTE--EEEEEEETTEEEEEEESEEEECSCEEESCSSSSTTTTTCCBCTTSCBC
T ss_pred HHHHHHHHHHCCCEEEeCCEEEEEEEeCCe--EEEEEEeCCceeEEEcCEEEECcCCCcccCcCChhhcCCccCCCCCEe
Confidence 999999999999999999999999864332 234443 4568999999999999999987 343 3555 468899
Q ss_pred EeccccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeeccc
Q 018320 159 VTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGDNV 238 (358)
Q Consensus 159 vd~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~~~ 238 (358)
||++|||+.|+|||+|||+..+ .++..|..||+.||.||++......+..+|+ ..+++..++++|+++
T Consensus 292 vd~~~~t~~~~Iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~--~~~~~~~~a~vG~~e 359 (455)
T 1ebd_A 292 VDQQCRTSVPNIFAIGDIVPGP----------ALAHKASYEGKVAAEAIAGHPSAVDYVAIPA--VVFSDPECASVGYFE 359 (455)
T ss_dssp CCTTCBCSSTTEEECGGGSSSC----------CCHHHHHHHHHHHHHHHTSCCCCCCCSCCCE--EECSSSCEEEEECCH
T ss_pred eCCCcccCCCCEEEEeccCCCc----------ccHHHHHHHHHHHHHHHcCCCccCCCCCCCE--EEECCCceEEEeCCH
Confidence 9999999999999999999754 3577899999999999998653334455664 567889999999987
Q ss_pred ceEE------EEc------------cCCCCceEEEEee--CCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcccHHHHhhc
Q 018320 239 GEVV------HYG------------NFSGTTFGAYWVN--KGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAELETQ 297 (358)
Q Consensus 239 ~~~~------~~g------------~~~~~~~~~~~~~--~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l~~~ 297 (358)
.++. ..+ ..+..+|.+++.+ +|+|+|+|++|+.+.+ ++.++.||++++|++||.++.
T Consensus 360 ~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~-- 437 (455)
T 1ebd_A 360 QQAKDEGIDVIAAKFPFAANGRALALNDTDGFLKLVVRKEDGVIIGAQIIGPNASDMIAELGLAIEAGMTAEDIALTI-- 437 (455)
T ss_dssp HHHHTTTCCEEEEEEEGGGCHHHHHHTCCCCEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHHTCBHHHHHHSC--
T ss_pred HHHHhcCCCEEEEEEEcCcchHHhhcCCCcEEEEEEEECCCCEEEEEEEeCCCHHHHHHHHHHHHHCCCCHHHHhhcc--
Confidence 5431 111 0122358777764 8999999999988655 678899999999999998765
Q ss_pred CCcccCCcCCC
Q 018320 298 GLGFALAVSQK 308 (358)
Q Consensus 298 ~~~yap~~~~~ 308 (358)
.++|++++.
T Consensus 438 --~~~Pt~~e~ 446 (455)
T 1ebd_A 438 --HAHPTLGEI 446 (455)
T ss_dssp --CCTTSSTHH
T ss_pred --cCCCCHHHH
Confidence 566888764
No 27
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=3e-36 Score=301.78 Aligned_cols=284 Identities=15% Similarity=0.187 Sum_probs=218.4
Q ss_pred CCccCCCCCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHH
Q 018320 6 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 85 (358)
Q Consensus 6 ~P~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~ 85 (358)
+|..+++||.+ .+++ .+++.++ . .+++++|||||++|+|+|..|+++|.+||++++.+++++. +|+++
T Consensus 152 ~p~~p~i~G~~--~~~~---~~~~~~~----~--~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~ 219 (500)
T 1onf_A 152 KPVFPPVKGIE--NTIS---SDEFFNI----K--ESKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRK-FDESV 219 (500)
T ss_dssp CBCCCSCTTGG--GCEE---HHHHTTC----C--CCSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTT-SCHHH
T ss_pred CCCCCCCCCCC--cccC---HHHHhcc----C--CCCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCcc-cchhh
Confidence 45555688864 3443 3343322 1 2789999999999999999999999999999999999986 89999
Q ss_pred HHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcE-EecCeEEEeeCCCCChh-h-hhc-ccccccCcEEEec
Q 018320 86 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNR-LPTDMVVVGIGIRPNTS-L-FEG-QLTLEKGGIKVTG 161 (358)
Q Consensus 86 ~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~-i~~D~vi~a~G~~p~~~-l-~~~-~~~~~~g~i~vd~ 161 (358)
.+.+.+.|+++||+++++++|++++.++++. ..+.+.+|++ +++|.|++|+|++|+++ + ++. ++..++|+|.||+
T Consensus 220 ~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~-~~v~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~G~i~vd~ 298 (500)
T 1onf_A 220 INVLENDMKKNNINIVTFADVVEIKKVSDKN-LSIHLSDGRIYEHFDHVIYCVGRSPDTENLKLEKLNVETNNNYIVVDE 298 (500)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEESSTTC-EEEEETTSCEEEEESEEEECCCBCCTTTTSSCTTTTCCBSSSCEEECT
T ss_pred HHHHHHHHHhCCCEEEECCEEEEEEEcCCce-EEEEECCCcEEEECCEEEECCCCCcCCCCCCchhcCccccCCEEEECC
Confidence 9999999999999999999999998744443 3577888988 99999999999999996 4 333 3555678899999
Q ss_pred cccCCCCcEEEEcccccccccc-----------------------cC-cccccccHHHHHHHHHHHHHHHcCCCC-CCCC
Q 018320 162 RLQSSNSSVYAVGDVAAFPLKL-----------------------LG-ETRRLEHVDSARKSAKHAVAAIMEPDK-TDKF 216 (358)
Q Consensus 162 ~~~t~~~~VyAiGD~~~~~~~~-----------------------~g-~~~~~~~~~~A~~~g~~aa~~i~g~~~-~~~~ 216 (358)
++||+.|+|||+|||+..+... ++ .....+++..|.+||+.||.||++... ...+
T Consensus 299 ~~~t~~~~iya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~ 378 (500)
T 1onf_A 299 NQRTSVNNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFLKKTRKTNY 378 (500)
T ss_dssp TCBCSSSSEEECSTTEEEC------------------------------CBCCCCHHHHHHHHHHHHHHHHSCTTCCCCC
T ss_pred CcccCCCCEEEEeccccccccccccccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHhCCCCccCCC
Confidence 9999999999999999532110 00 002346889999999999999998542 2345
Q ss_pred CCCCeEEEEecCceEEEeecccceEEEE--------c----------------cCCCCceEEEEe--eCCeEEEEEEeCC
Q 018320 217 DYLPFFYSRVFTLSWQFYGDNVGEVVHY--------G----------------NFSGTTFGAYWV--NKGRLVGSFLEGG 270 (358)
Q Consensus 217 ~~~p~~~~~~~~~~~~~~G~~~~~~~~~--------g----------------~~~~~~~~~~~~--~~g~ilGa~~vg~ 270 (358)
..+|++ .+++..++++|+++.++... . .....+|.|+.+ ++|+|||+|++|+
T Consensus 379 ~~~p~~--~~~~~~~a~vGl~e~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~ 456 (500)
T 1onf_A 379 KLIPTV--IFSHPPIGTIGLSEEAAIQIYGKENVKIYESKFTNLFFSVYDIEPELKEKTYLKLVCVGKDELIKGLHIIGL 456 (500)
T ss_dssp SSCCEE--ECCSSCEEEEECCHHHHHHHTCGGGEEEEEEEECCGGGTTSCSCGGGSCCEEEEEEEETTTTEEEEEEEEST
T ss_pred CCCCeE--EEcCcceEEEeCCHHHHHhcCCCccEEEEEEECchhhhhhccccccCCCceEEEEEEECCCCEEEEEEEECC
Confidence 566754 46788999999886543211 0 011234777665 5899999999998
Q ss_pred CHHH-HHHHHHHHHcCCCcccHHHHhhcCCcccCCcCCC
Q 018320 271 TKEE-YEAIAKATRLQPVVEDLAELETQGLGFALAVSQK 308 (358)
Q Consensus 271 ~~~~-~~~~a~ai~~~~~~~dl~~l~~~~~~yap~~~~~ 308 (358)
.+.+ ++.++.||+.++|++||.++. .++|++++.
T Consensus 457 ~a~~~i~~~~~ai~~~~t~~~l~~~~----~~~Pt~~e~ 491 (500)
T 1onf_A 457 NADEIVQGFAVALKMNATKKDFDETI----PIHPTAAEE 491 (500)
T ss_dssp THHHHHHHHHHHHHTTCBHHHHHTSC----CCTTCSTTH
T ss_pred CHHHHHHHHHHHHHcCCCHHHHhccc----cCCCCHHHH
Confidence 7655 678899999999999998764 778888775
No 28
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=1.7e-36 Score=302.88 Aligned_cols=275 Identities=17% Similarity=0.260 Sum_probs=218.4
Q ss_pred CCccCCCCCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhC---CCcEEEEeeCCcccCccCC
Q 018320 6 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVIN---KINVTMVFPEAHCMARLFT 82 (358)
Q Consensus 6 ~P~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~---g~~Vtlv~~~~~~l~~~~~ 82 (358)
+|..+++||.+ ++ .+.+++..+ . ..+++++|||||++|+|+|..|.++ |.+||++++.+++++. +|
T Consensus 162 ~p~~p~i~g~~--~~---~~~~~~~~~----~-~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~-~d 230 (490)
T 1fec_A 162 WPQHLGIEGDD--LC---ITSNEAFYL----D-EAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRG-FD 230 (490)
T ss_dssp EECCCCSBTGG--GC---BCHHHHTTC----S-SCCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTT-SC
T ss_pred CCCCCCCCCcc--ce---ecHHHHhhh----h-hcCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccc-cC
Confidence 34455677763 33 344444332 1 2478999999999999999999999 9999999999999986 89
Q ss_pred HHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChhh--hhc-cccc-ccCcEE
Q 018320 83 PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSL--FEG-QLTL-EKGGIK 158 (358)
Q Consensus 83 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l--~~~-~~~~-~~g~i~ 158 (358)
+++.+.+.+.|+++||+++++++|++++.++++. ..+++.+|+++++|.||+|+|++|+++. ++. ++.+ ++|+|.
T Consensus 231 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~-~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~I~ 309 (490)
T 1fec_A 231 SELRKQLTEQLRANGINVRTHENPAKVTKNADGT-RHVVFESGAEADYDVVMLAIGRVPRSQTLQLEKAGVEVAKNGAIK 309 (490)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSC-EEEEETTSCEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCE-EEEEECCCcEEEcCEEEEccCCCcCccccCchhcCccCCCCCCEE
Confidence 9999999999999999999999999998744333 3577888989999999999999999973 333 3666 478899
Q ss_pred EeccccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCCCC-CCCCCCCCeEEEEecCceEEEeecc
Q 018320 159 VTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDK-TDKFDYLPFFYSRVFTLSWQFYGDN 237 (358)
Q Consensus 159 vd~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~-~~~~~~~p~~~~~~~~~~~~~~G~~ 237 (358)
||++|||+.|+|||+|||+..+ .++..|.+||+.+|.||++... ...+..+|+ ..+++..++++|++
T Consensus 310 Vd~~~~t~~~~IyA~GD~~~~~----------~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~--~~~~~~~~a~vG~~ 377 (490)
T 1fec_A 310 VDAYSKTNVDNIYAIGDVTDRV----------MLTPVAINEGAAFVDTVFANKPRATDHTKVAC--AVFSIPPMGVCGYV 377 (490)
T ss_dssp CCTTCBCSSTTEEECGGGGCSC----------CCHHHHHHHHHHHHHHHHSSCCCCCCCSSCCE--EECCSSCEEEEECC
T ss_pred ECCCCccCCCCEEEEeccCCCc----------cCHHHHHHHHHHHHHHhcCCCCCcCCCCCccE--EEECCCCeEEEeCC
Confidence 9999999999999999999642 4688899999999999998542 234555664 55678999999998
Q ss_pred cceEE------EEc------------cCCCCceE-EEEee--CCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcccHHHHh
Q 018320 238 VGEVV------HYG------------NFSGTTFG-AYWVN--KGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAELE 295 (358)
Q Consensus 238 ~~~~~------~~g------------~~~~~~~~-~~~~~--~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l~ 295 (358)
+.++. ... .....+|. |+.++ +|+|||+|++|+.+.+ ++.++.||++++|++||.++
T Consensus 378 e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~- 456 (490)
T 1fec_A 378 EEDAAKKYDQVAVYESSFTPLMHNISGSTYKKFMVRIVTNHADGEVLGVHMLGDSSPEIIQSVAICLKMGAKISDFYNT- 456 (490)
T ss_dssp HHHHHHHCSEEEEEEEEECCHHHHHHSCTTCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTS-
T ss_pred HHHHHhcCCCEEEEEeecChhhhhhhcCCCeEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhcc-
Confidence 75431 110 11234577 87764 8999999999988665 67889999999999999875
Q ss_pred hcCCcccCCcCCC
Q 018320 296 TQGLGFALAVSQK 308 (358)
Q Consensus 296 ~~~~~yap~~~~~ 308 (358)
+.++|++++.
T Consensus 457 ---~~~hPt~~e~ 466 (490)
T 1fec_A 457 ---IGVHPTSAEE 466 (490)
T ss_dssp ---CCCSSCSGGG
T ss_pred ---ccCCCCHHHH
Confidence 4788888887
No 29
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.6e-36 Score=301.13 Aligned_cols=276 Identities=21% Similarity=0.250 Sum_probs=216.2
Q ss_pred CCccCCCCCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHH
Q 018320 6 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 85 (358)
Q Consensus 6 ~P~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~ 85 (358)
+|..++++|.+.++++ +..++..+ . ..+++++|||||++|+|+|..|++.|.+||++++.+++++. +++++
T Consensus 150 ~p~~p~~~g~~~~~v~---~~~~~~~~----~-~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~-~~~~~ 220 (470)
T 1dxl_A 150 DVKSLPGVTIDEKKIV---SSTGALAL----S-EIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPT-MDAEI 220 (470)
T ss_dssp EECCBTTBCCCSSSEE---CHHHHTTC----S-SCCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-SCHHH
T ss_pred CCCCCCCCCCCcccEE---eHHHhhhh----h-hcCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc-ccHHH
Confidence 3455567776655665 33444332 1 14799999999999999999999999999999999999985 89999
Q ss_pred HHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcC---CC--cEEecCeEEEeeCCCCChhh--hhc-cccc-ccCc
Q 018320 86 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLR---DG--NRLPTDMVVVGIGIRPNTSL--FEG-QLTL-EKGG 156 (358)
Q Consensus 86 ~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~---~g--~~i~~D~vi~a~G~~p~~~l--~~~-~~~~-~~g~ 156 (358)
.+.+.+.|++.||+++++++|++++.++++ ..+.+. +| +++++|.|++|+|++|++++ ++. ++.+ ++|+
T Consensus 221 ~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~ 298 (470)
T 1dxl_A 221 RKQFQRSLEKQGMKFKLKTKVVGVDTSGDG--VKLTVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGR 298 (470)
T ss_dssp HHHHHHHHHHSSCCEECSEEEEEEECSSSS--EEEEEEESSSCCCEEEEESEEECCCCEEECCTTSCCTTTTCCBCSSSC
T ss_pred HHHHHHHHHHcCCEEEeCCEEEEEEEcCCe--EEEEEEecCCCcceEEECCEEEECCCCCcCCCCCCchhcCCccCCCCC
Confidence 999999999999999999999999864333 234443 44 68999999999999999987 443 3565 4688
Q ss_pred EEEeccccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeec
Q 018320 157 IKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGD 236 (358)
Q Consensus 157 i~vd~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~ 236 (358)
|.||++|||+.|+|||+|||+..+ .++..|..||+.||.||++......+..+| +..+++..++++|+
T Consensus 299 i~vd~~~~t~~~~Iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p--~~~~~~~~~a~vG~ 366 (470)
T 1dxl_A 299 ILVNERFSTNVSGVYAIGDVIPGP----------MLAHKAEEDGVACVEYLAGKVGHVDYDKVP--GVVYTNPEVASVGK 366 (470)
T ss_dssp BCCCTTCBCSSTTEEECSTTSSSC----------CCHHHHHHHHHHHHHHHTTSCCCCCTTSCC--EEECSSSEEEEEEC
T ss_pred EeECcCCccCCCCEEEEeccCCCC----------ccHHHHHHHHHHHHHHHcCCCcCCCCCCCC--EEEECCCceEEEcC
Confidence 999999999999999999999754 357789999999999999865333445566 45678999999999
Q ss_pred ccceEE------EEc------------cCCCCceEEEEe--eCCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcccHHHHh
Q 018320 237 NVGEVV------HYG------------NFSGTTFGAYWV--NKGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAELE 295 (358)
Q Consensus 237 ~~~~~~------~~g------------~~~~~~~~~~~~--~~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l~ 295 (358)
++.++. ..+ ..+..+|.+++. ++|+|+|+|++|+.+.+ ++.++.||++++|++||.++.
T Consensus 367 ~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~ 446 (470)
T 1dxl_A 367 TEEQVKETGVEYRVGKFPFMANSRAKAIDNAEGLVKIIAEKETDKILGVHIMAPNAGELIHEAAIALQYDASSEDIARVC 446 (470)
T ss_dssp CHHHHHHTTCCEEEEEEEGGGCHHHHHHSCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSC
T ss_pred CHHHHHhcCCcEEEEEEecccchHHHhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcc
Confidence 875421 110 012345877776 48999999999988655 678899999999999998754
Q ss_pred hcCCcccCCcCCC
Q 018320 296 TQGLGFALAVSQK 308 (358)
Q Consensus 296 ~~~~~yap~~~~~ 308 (358)
.++|++++.
T Consensus 447 ----~~~Pt~~e~ 455 (470)
T 1dxl_A 447 ----HAHPTMSEA 455 (470)
T ss_dssp ----CCSSCTTHH
T ss_pred ----cCCCChHHH
Confidence 566888765
No 30
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=3.5e-36 Score=297.45 Aligned_cols=275 Identities=17% Similarity=0.202 Sum_probs=216.0
Q ss_pred CCccCCCCCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHH
Q 018320 6 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 85 (358)
Q Consensus 6 ~P~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~ 85 (358)
+|..+++||.+ .+ .+.+++..+ . ..+++++|||||++|+|+|..|+++|.+||++++.+++++. +++++
T Consensus 142 ~p~~p~i~g~~--~~---~~~~~~~~~----~-~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~ 210 (450)
T 1ges_A 142 RPSHPDIPGVE--YG---IDSDGFFAL----P-ALPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPS-FDPMI 210 (450)
T ss_dssp EECCCCSTTGG--GS---BCHHHHHHC----S-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHH
T ss_pred CCCCCCCCCcc--ce---ecHHHhhhh----h-hcCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhhh-hhHHH
Confidence 35555678764 23 344554433 1 24799999999999999999999999999999999999986 89999
Q ss_pred HHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChhh--hhc-cccc-ccCcEEEec
Q 018320 86 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSL--FEG-QLTL-EKGGIKVTG 161 (358)
Q Consensus 86 ~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l--~~~-~~~~-~~g~i~vd~ 161 (358)
.+.+.+.+++.||+++++++|++++.++++. ..+.+.+|+++++|.||+|+|++|+++. ++. ++.. ++|+|.||+
T Consensus 211 ~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~-~~v~~~~g~~i~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~ 289 (450)
T 1ges_A 211 SETLVEVMNAEGPQLHTNAIPKAVVKNTDGS-LTLELEDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDK 289 (450)
T ss_dssp HHHHHHHHHHHSCEEECSCCEEEEEECTTSC-EEEEETTSCEEEESEEEECSCEEESCTTSCHHHHTCCBCTTSCBCCCT
T ss_pred HHHHHHHHHHCCCEEEeCCEEEEEEEeCCcE-EEEEECCCcEEEcCEEEECCCCCcCCCCCCchhcCceECCCCCEeECC
Confidence 9999999999999999999999998744443 3577889989999999999999999973 333 3665 578899999
Q ss_pred cccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCCCCC--CCCCCCCeEEEEecCceEEEeecccc
Q 018320 162 RLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKT--DKFDYLPFFYSRVFTLSWQFYGDNVG 239 (358)
Q Consensus 162 ~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~--~~~~~~p~~~~~~~~~~~~~~G~~~~ 239 (358)
++||+.|+|||+|||+..+ .++..|.+||+.+|.||++.... ..+..+|+. .+++..++++|+++.
T Consensus 290 ~~~t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~--~~~~~~~a~vG~~e~ 357 (450)
T 1ges_A 290 YQNTNIEGIYAVGDNTGAV----------ELTPVAVAAGRRLSERLFNNKPDEHLDYSNIPTV--VFSHPPIGTVGLTEP 357 (450)
T ss_dssp TSBCSSTTEEECSGGGTSC----------CCHHHHHHHHHHHHHHHHTTCTTCCCCCSSCCEE--ECCSSCEEEEECCHH
T ss_pred CCccCCCCEEEEeccCCCC----------ccHHHHHHHHHHHHHHHcCCCCcccCCCCCCCeE--EECCCceEEEeCCHH
Confidence 9999999999999998643 45778999999999999985422 245567754 456788999998765
Q ss_pred eEEEE-c-------------------cCCCCceEEEEe--eCCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcccHHHHhh
Q 018320 240 EVVHY-G-------------------NFSGTTFGAYWV--NKGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAELET 296 (358)
Q Consensus 240 ~~~~~-g-------------------~~~~~~~~~~~~--~~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l~~ 296 (358)
++... | .....+|.|+.. ++|+|+|+|++|+++.+ ++.++.||++++|++||.++.
T Consensus 358 ~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~- 436 (450)
T 1ges_A 358 QAREQYGDDQVKVYKSSFTAMYTAVTTHRQPCRMKLVCVGSEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTV- 436 (450)
T ss_dssp HHHHHHCGGGEEEEEEEEECHHHHTSSSCCEEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSC-
T ss_pred HHHhcCCCCcEEEEEEECchhhHHHhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCc-
Confidence 43211 0 111223767665 48999999999988665 678899999999999998765
Q ss_pred cCCcccCCcCCC
Q 018320 297 QGLGFALAVSQK 308 (358)
Q Consensus 297 ~~~~yap~~~~~ 308 (358)
.++|.+++.
T Consensus 437 ---~~hPt~~e~ 445 (450)
T 1ges_A 437 ---AIHPTAAEE 445 (450)
T ss_dssp ---CCSSCSGGG
T ss_pred ---cCCCChHHH
Confidence 677777765
No 31
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=100.00 E-value=2.1e-36 Score=301.06 Aligned_cols=275 Identities=19% Similarity=0.238 Sum_probs=214.4
Q ss_pred CCCCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHHHHHHH
Q 018320 11 GLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYE 90 (358)
Q Consensus 11 ~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~ 90 (358)
.+||.+..+ +.+.+.+++.+++ . .+++++|||||++|+|+|..|+++|.+||++++.+++++. +++++.+.+.
T Consensus 159 ~~~g~~~~~-~~v~~~~~~~~~~----~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~ 231 (478)
T 1v59_A 159 PFPGIEIDE-EKIVSSTGALSLK----E-IPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS-MDGEVAKATQ 231 (478)
T ss_dssp CCTTCCCCS-SSEECHHHHTTCS----S-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS-SCHHHHHHHH
T ss_pred CCCCCCCCC-ceEEcHHHHHhhh----c-cCceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc-cCHHHHHHHH
Confidence 356654443 2244566655432 1 4799999999999999999999999999999999999995 8999999999
Q ss_pred HHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcC-----CCcEEecCeEEEeeCCCCChh--hhhcc-ccc-ccCcEEEec
Q 018320 91 EYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLR-----DGNRLPTDMVVVGIGIRPNTS--LFEGQ-LTL-EKGGIKVTG 161 (358)
Q Consensus 91 ~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~-----~g~~i~~D~vi~a~G~~p~~~--l~~~~-~~~-~~g~i~vd~ 161 (358)
+.|++.||+++++++|++++.++++....+.+. +++++++|.||+|+|++|+++ +++.. +.+ ++|+|.||+
T Consensus 232 ~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~ 311 (478)
T 1v59_A 232 KFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIAGLGAEKIGLEVDKRGRLVIDD 311 (478)
T ss_dssp HHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCTTSCTTTTTCCBCTTSCBCCCT
T ss_pred HHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCCCCCchhcCceeCCCCCEeECc
Confidence 999999999999999999985213333445554 456899999999999999998 55543 665 478899999
Q ss_pred cccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeecccceE
Q 018320 162 RLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGDNVGEV 241 (358)
Q Consensus 162 ~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~~~ 241 (358)
+|||+.|+|||+|||+..+ .++..|..||+.||.||++.....++..+|+ ..+++..++++|+++.++
T Consensus 312 ~~~t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~--~~~~~~~~a~vG~~e~~a 379 (478)
T 1v59_A 312 QFNSKFPHIKVVGDVTFGP----------MLAHKAEEEGIAAVEMLKTGHGHVNYNNIPS--VMYSHPEVAWVGKTEEQL 379 (478)
T ss_dssp TSBCSSTTEEECGGGSSSC----------CCHHHHHHHHHHHHHHHHHSCCCCCTTSCCE--EECSSSEEEEEECCHHHH
T ss_pred CCccCCCCEEEeeccCCCc----------ccHHHHHHHHHHHHHHHcCCCCCCCCCCCCE--EEEcCCcEEEEECCHHHH
Confidence 9999999999999999854 3567899999999999998653345666775 456788999999987542
Q ss_pred E-------EEc-----------cCCCCceEEEEe--eCCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcccHHHHhhcCCc
Q 018320 242 V-------HYG-----------NFSGTTFGAYWV--NKGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAELETQGLG 300 (358)
Q Consensus 242 ~-------~~g-----------~~~~~~~~~~~~--~~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l~~~~~~ 300 (358)
. ... ..+..+|.+++. ++|+|+|++++|+.+.+ +..++.||++++|++||.++. .
T Consensus 380 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~----~ 455 (478)
T 1v59_A 380 KEAGIDYKIGKFPFAANSRAKTNQDTEGFVKILIDSKTERILGAHIIGPNAGEMIAEAGLALEYGASAEDVARVC----H 455 (478)
T ss_dssp HHTTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSC----C
T ss_pred HHcCCCEEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCC----C
Confidence 1 110 012234766655 48999999999988655 678899999999999998776 3
Q ss_pred ccCCcCCC
Q 018320 301 FALAVSQK 308 (358)
Q Consensus 301 yap~~~~~ 308 (358)
++|++++.
T Consensus 456 ~~Pt~~e~ 463 (478)
T 1v59_A 456 AHPTLSEA 463 (478)
T ss_dssp CTTCTTHH
T ss_pred CCCCHHHH
Confidence 56887765
No 32
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=4.9e-36 Score=298.47 Aligned_cols=252 Identities=19% Similarity=0.218 Sum_probs=203.9
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEE
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVA 119 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~ 119 (358)
.+++++|||||++|+|+|..|+++|.+||++++.+++++. +++++.+.+.+.|+++||++++++.+++++.++++....
T Consensus 186 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~ 264 (478)
T 3dk9_A 186 LPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRS-FDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVS 264 (478)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-SCHHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEE
T ss_pred cCccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccccc-cCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEE
Confidence 4799999999999999999999999999999999999986 899999999999999999999999999998755552335
Q ss_pred EEcCC---C----cEEecCeEEEeeCCCCChhh--hhc-cccc-ccCcEEEeccccCCCCcEEEEcccccccccccCccc
Q 018320 120 VNLRD---G----NRLPTDMVVVGIGIRPNTSL--FEG-QLTL-EKGGIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETR 188 (358)
Q Consensus 120 v~~~~---g----~~i~~D~vi~a~G~~p~~~l--~~~-~~~~-~~g~i~vd~~~~t~~~~VyAiGD~~~~~~~~~g~~~ 188 (358)
+.+.+ | +++++|.|++|+|++|+++. ++. ++.+ ++|+|.||++++|+.|+|||+|||+..+
T Consensus 265 v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~-------- 336 (478)
T 3dk9_A 265 MVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVCGKA-------- 336 (478)
T ss_dssp EEECCTTSCCEEEEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTCCBCCCTTCBCSSTTEEECGGGGCSS--------
T ss_pred EEEccCCCCcccceEEEcCEEEEeeccccCCCCCCchhcCCeeCCCCCEeeCCCcccCCCCEEEEEecCCCC--------
Confidence 66654 2 57999999999999999983 333 3666 6788999999999999999999999544
Q ss_pred ccccHHHHHHHHHHHHHHHcCCC--CCCCCCCCCeEEEEecCceEEEeecccceEEEEc-------------c-------
Q 018320 189 RLEHVDSARKSAKHAVAAIMEPD--KTDKFDYLPFFYSRVFTLSWQFYGDNVGEVVHYG-------------N------- 246 (358)
Q Consensus 189 ~~~~~~~A~~~g~~aa~~i~g~~--~~~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~~g-------------~------- 246 (358)
.++..|..||+.||.+|++.. ....+..+|+ ..++++.++++|+++.++...+ .
T Consensus 337 --~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~--~~~~~p~~a~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (478)
T 3dk9_A 337 --LLTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPT--VVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPMYHAVTK 412 (478)
T ss_dssp --CCHHHHHHHHHHHHHHHHSCCTTCCCCCTTCCE--EECCSSCEEEEECCHHHHHHHHCGGGEEEEEEEECCGGGGGCS
T ss_pred --ccHhHHHHHHHHHHHHHcCCCCcccCCCCCCCe--EEECCCceEEeeCCHHHHHhhCCCccEEEEEeecCcchhhhhc
Confidence 357789999999999999872 2235566775 4467888999999886532111 0
Q ss_pred CCCCceEEEEe--eCCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcccHHHHhhcCCcccCCcCCC
Q 018320 247 FSGTTFGAYWV--NKGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAELETQGLGFALAVSQK 308 (358)
Q Consensus 247 ~~~~~~~~~~~--~~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l~~~~~~yap~~~~~ 308 (358)
....+|.|+.. ++|+|||+|++|+++.+ ++.++.||++++|++||.++. ..+|.+++.
T Consensus 413 ~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~----~~hPt~~e~ 473 (478)
T 3dk9_A 413 RKTKCVMKMVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTV----AIHPTSSEE 473 (478)
T ss_dssp SCCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSC----CCSSSSGGG
T ss_pred CCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcc----cCCCChHHH
Confidence 11234767654 58999999999988655 678899999999999998855 566777665
No 33
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=3.8e-36 Score=299.02 Aligned_cols=250 Identities=22% Similarity=0.253 Sum_probs=204.9
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEE
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVA 119 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~ 119 (358)
.+++++|||+|++|+|+|..|++.|.+||++++.+++++. +++++.+.+.+.|++.||++++++++++++.++++ ..
T Consensus 179 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~--~~ 255 (476)
T 3lad_A 179 VPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPA-VDEQVAKEAQKILTKQGLKILLGARVTGTEVKNKQ--VT 255 (476)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-SCHHHHHHHHHHHHHTTEEEEETCEEEEEEECSSC--EE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCcc-cCHHHHHHHHHHHHhCCCEEEECCEEEEEEEcCCE--EE
Confidence 5799999999999999999999999999999999999986 89999999999999999999999999999874433 23
Q ss_pred EEcCCC---cEEecCeEEEeeCCCCChhhh--hc-cccc-ccCcEEEeccccCCCCcEEEEcccccccccccCccccccc
Q 018320 120 VNLRDG---NRLPTDMVVVGIGIRPNTSLF--EG-QLTL-EKGGIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEH 192 (358)
Q Consensus 120 v~~~~g---~~i~~D~vi~a~G~~p~~~l~--~~-~~~~-~~g~i~vd~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~ 192 (358)
+.+.++ +++++|.|++|+|++|+++++ +. .+.+ ++|+|.||++++|+.|+|||+|||+..+ .+
T Consensus 256 v~~~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~----------~~ 325 (476)
T 3lad_A 256 VKFVDAEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDYCATSVPGVYAIGDVVRGA----------ML 325 (476)
T ss_dssp EEEESSSEEEEEEESEEEECSCEEECCTTCCSSCCSCCBCTTSCBCCCTTSBCSSTTEEECGGGSSSC----------CC
T ss_pred EEEEeCCCcEEEECCEEEEeeCCcccCCCCCccccCccccCCCCEeeCCCcccCCCCEEEEEccCCCc----------cc
Confidence 555544 679999999999999999853 32 3555 5788999999999999999999999654 35
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeecccceEEEE------c-----c-------CCCCceEE
Q 018320 193 VDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGDNVGEVVHY------G-----N-------FSGTTFGA 254 (358)
Q Consensus 193 ~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~~------g-----~-------~~~~~~~~ 254 (358)
+..|..||+.||++|+|.....++..+|+.. +++..++++|+++.++... + . .+..+|.|
T Consensus 326 ~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~--~~~~~~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k 403 (476)
T 3lad_A 326 AHKASEEGVVVAERIAGHKAQMNYDLIPAVI--YTHPEIAGVGKTEQALKAEGVAINVGVFPFAASGRAMAANDTAGFVK 403 (476)
T ss_dssp HHHHHHHHHHHHHHHHHCCCCCCTTCCCEEE--CSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHHTCCCCEEE
T ss_pred HHHHHHHHHHHHHHhcCCCcccCCCCCCEEE--ECcCCEEEeeCCHHHHHhcCCCEEEEEEeccccchheecCCCcEEEE
Confidence 7789999999999999876545667778654 6889999999998643211 1 0 12235766
Q ss_pred EEe--eCCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcccHHHHhhcCCcccCCcCCC
Q 018320 255 YWV--NKGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAELETQGLGFALAVSQK 308 (358)
Q Consensus 255 ~~~--~~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l~~~~~~yap~~~~~ 308 (358)
+.. ++|+|||+|++|+++.+ ++.++.||++++|++||.++. .++|++++.
T Consensus 404 ~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~----~~hPt~~e~ 456 (476)
T 3lad_A 404 VIADAKTDRVLGVHVIGPSAAELVQQGAIAMEFGTSAEDLGMMV----FAHPALSEA 456 (476)
T ss_dssp EEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHTSC----CCSSCSHHH
T ss_pred EEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCcHHHHhcCc----cCCCChHHH
Confidence 655 58999999999988655 678899999999999999876 456777665
No 34
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=100.00 E-value=9.6e-35 Score=281.24 Aligned_cols=258 Identities=24% Similarity=0.351 Sum_probs=211.2
Q ss_pred CCccCCCCCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHH
Q 018320 6 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 85 (358)
Q Consensus 6 ~P~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~ 85 (358)
+|..+++||.+.+++++.+++.++.++++.+. .+++++|||+|++|+|+|..|++.|.+||++++.+++++..+++++
T Consensus 112 ~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~--~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~ 189 (384)
T 2v3a_A 112 EPIRVPVEGDAQDALYPINDLEDYARFRQAAA--GKRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGLLHPAA 189 (384)
T ss_dssp EECCCCCBSTTTTCEEECSSHHHHHHHHHHHT--TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHH
T ss_pred CcCCCCCCCcCcCCEEEECCHHHHHHHHHhhc--cCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhcccCHHH
Confidence 45566789987788999999999999888775 5899999999999999999999999999999999999987679999
Q ss_pred HHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChhhhhcc-cccccCcEEEecccc
Q 018320 86 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQ-LTLEKGGIKVTGRLQ 164 (358)
Q Consensus 86 ~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~-~~~~~g~i~vd~~~~ 164 (358)
.+.+.+.+++.||+++++++|++++.++++ ..+.+.+|+++++|.||+|+|++|++++++.. +..++| |.||+++|
T Consensus 190 ~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~g~~i~~d~vv~a~G~~p~~~l~~~~g~~~~~g-i~vd~~~~ 266 (384)
T 2v3a_A 190 AKAVQAGLEGLGVRFHLGPVLASLKKAGEG--LEAHLSDGEVIPCDLVVSAVGLRPRTELAFAAGLAVNRG-IVVDRSLR 266 (384)
T ss_dssp HHHHHHHHHTTTCEEEESCCEEEEEEETTE--EEEEETTSCEEEESEEEECSCEEECCHHHHHTTCCBSSS-EEECTTCB
T ss_pred HHHHHHHHHHcCCEEEeCCEEEEEEecCCE--EEEEECCCCEEECCEEEECcCCCcCHHHHHHCCCCCCCC-EEECCCCC
Confidence 999999999999999999999999864332 46778899999999999999999999877543 555556 99999999
Q ss_pred CCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeecccc---eE
Q 018320 165 SSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGDNVG---EV 241 (358)
Q Consensus 165 t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~---~~ 241 (358)
|+.|+|||+|||+..... ..+++..|..||+.+|.||+|......+..+|+++. .+++++.+.|.... ..
T Consensus 267 t~~~~IyA~GD~~~~~~~------~~~~~~~a~~~g~~~a~~i~g~~~~~~~~~~p~~~~-~~~~~~~~~g~~~~~~~~~ 339 (384)
T 2v3a_A 267 TSHANIYALGDCAEVDGL------NLLYVMPLMACARALAQTLAGNPSQVAYGPMPVTVK-TPACPLVVSPPPRGMDGQW 339 (384)
T ss_dssp CSSTTEEECGGGEEETTB------CCCSHHHHHHHHHHHHHHHTTCCCCCCCCCCCEEEC-CTTSCEEEECCCTTCCCEE
T ss_pred CCCCCEEEeeeeeeECCC------CcchHHHHHHHHHHHHHHhcCCCccCCCCCcceEEE-ECCeeEEEecCCCCCCceE
Confidence 999999999999975432 135788899999999999998764345566787543 24578899997643 34
Q ss_pred EEEccCCCCceEEEEe-eCCeEEEEEEeCCCHHHHHH
Q 018320 242 VHYGNFSGTTFGAYWV-NKGRLVGSFLEGGTKEEYEA 277 (358)
Q Consensus 242 ~~~g~~~~~~~~~~~~-~~g~ilGa~~vg~~~~~~~~ 277 (358)
...++.. +|.+++. ++|+|+|++++|+.+.++..
T Consensus 340 ~~~~~~~--g~~~~~~~~~~~i~G~~~~g~~a~e~~~ 374 (384)
T 2v3a_A 340 LVEGSGT--DLKVLCRDTAGRVIGYALTGAAVNEKLA 374 (384)
T ss_dssp EEEEETT--EEEEEEECTTSCEEEEEEEGGGGGGHHH
T ss_pred EEEecCC--cEEEEEEccCCEEEEEEEECcchHHHHH
Confidence 4444432 4777666 48999999999988776543
No 35
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=7.7e-36 Score=298.02 Aligned_cols=250 Identities=20% Similarity=0.287 Sum_probs=205.8
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEE
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVA 119 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~ 119 (358)
.+++++|||||++|+|+|..|++.|.+||++++.+++++. +++++.+.+.+.|++.||++++++++++++.++++ ..
T Consensus 197 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~--~~ 273 (491)
T 3urh_A 197 VPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGG-MDGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDG--AK 273 (491)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSS-SCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTE--EE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccccc-CCHHHHHHHHHHHHhCCCEEEECCeEEEEEEeCCE--EE
Confidence 5799999999999999999999999999999999999986 89999999999999999999999999999874433 23
Q ss_pred EEcCC---C--cEEecCeEEEeeCCCCChhh--hh-ccccc-ccCcEEEeccccCCCCcEEEEcccccccccccCccccc
Q 018320 120 VNLRD---G--NRLPTDMVVVGIGIRPNTSL--FE-GQLTL-EKGGIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRL 190 (358)
Q Consensus 120 v~~~~---g--~~i~~D~vi~a~G~~p~~~l--~~-~~~~~-~~g~i~vd~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~ 190 (358)
+.+.+ | +++++|.||+|+|++|++++ ++ ..+.+ ++|+|.||+++||+.|+|||+|||+..+
T Consensus 274 v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~---------- 343 (491)
T 3urh_A 274 VTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDRHFQTSIAGVYAIGDVVRGP---------- 343 (491)
T ss_dssp EEEEETTSCCCEEEEESEEEECCCCEECCTTSCHHHHTCCBCTTSCBCCCTTCBCSSTTEEECGGGSSSC----------
T ss_pred EEEEecCCCceEEEEcCEEEEeeCCccCCCccCchhcCceECCCCCEeECCCCCCCCCCEEEEEecCCCc----------
Confidence 44432 4 57999999999999999986 33 33666 5788999999999999999999999654
Q ss_pred ccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeecccceEEEEc-----------c-------CCCCce
Q 018320 191 EHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGDNVGEVVHYG-----------N-------FSGTTF 252 (358)
Q Consensus 191 ~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~~g-----------~-------~~~~~~ 252 (358)
.++..|..||+.||.+|+|......+..+|+.. +++..++++|+++.++...| . .+..+|
T Consensus 344 ~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~--~~~p~~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~ 421 (491)
T 3urh_A 344 MLAHKAEDEGVAVAEIIAGQAGHVNYDVIPGVV--YTQPEVASVGKTEEELKAAGVAYKIGKFPFTANGRARAMLQTDGF 421 (491)
T ss_dssp CCHHHHHHHHHHHHHHHTTSCCCCCTTCCCEEE--CSSSCEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHTTCCCCE
T ss_pred cchhHHHHHHHHHHHHHcCCCcccCCCCCCEEE--EccCCeEEEeCCHHHHHhCCCCEEEEEEecCcchhhhcCCCCcEE
Confidence 467889999999999999976545566778654 68899999999886532111 0 122347
Q ss_pred EEEEe--eCCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcccHHHHhhcCCcccCCcCCC
Q 018320 253 GAYWV--NKGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAELETQGLGFALAVSQK 308 (358)
Q Consensus 253 ~~~~~--~~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l~~~~~~yap~~~~~ 308 (358)
.|+.. ++|+|||+|++|+++.+ |+.++.||++++|++||.++. .++|++++.
T Consensus 422 ~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~----~~hPt~~e~ 476 (491)
T 3urh_A 422 VKILADKETDRVLGGHIIGFGAGEMIHEIAVLMEFGGSSEDLGRTC----HAHPTMSEA 476 (491)
T ss_dssp EEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSC----CCSSCTTHH
T ss_pred EEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCcHHHHhcCc----cCCCChHHH
Confidence 77665 58999999999998655 678899999999999999876 566887765
No 36
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=1.1e-35 Score=295.08 Aligned_cols=269 Identities=22% Similarity=0.282 Sum_probs=212.5
Q ss_pred CCCCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHHHHHHH
Q 018320 11 GLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYE 90 (358)
Q Consensus 11 ~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~ 90 (358)
++||. .+++ +.+++.++. ...+++++|||||++|+|+|..|+++|.+||++++.+++++. +++++.+.+.
T Consensus 148 gi~~~--~~v~---~~~~~~~l~----~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~ 217 (464)
T 2eq6_A 148 GFPFG--EDVW---DSTRALKVE----EGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQ-GDPETAALLR 217 (464)
T ss_dssp TBCCS--SSEE---CHHHHTCGG----GCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHH
T ss_pred CCCCC--CcEE---cHHHHHhhh----hhcCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccc-cCHHHHHHHH
Confidence 36663 2454 555554432 214789999999999999999999999999999999999985 8999999999
Q ss_pred HHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcC-C--Cc--EEecCeEEEeeCCCCChhhh--hc-cccc-ccCcEEEec
Q 018320 91 EYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLR-D--GN--RLPTDMVVVGIGIRPNTSLF--EG-QLTL-EKGGIKVTG 161 (358)
Q Consensus 91 ~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~-~--g~--~i~~D~vi~a~G~~p~~~l~--~~-~~~~-~~g~i~vd~ 161 (358)
+.|++.||+++++++|++++.++ +. ..+.+. + |+ ++++|.|++|+|++|+++++ +. ++.. ++|+|.||+
T Consensus 218 ~~l~~~gV~i~~~~~v~~i~~~~-~~-~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~ 295 (464)
T 2eq6_A 218 RALEKEGIRVRTKTKAVGYEKKK-DG-LHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNA 295 (464)
T ss_dssp HHHHHTTCEEECSEEEEEEEEET-TE-EEEEEEETTCCSCEEEEESEEEECSCEEESCTTSSHHHHTCCBCTTSCBCCCT
T ss_pred HHHHhcCCEEEcCCEEEEEEEeC-CE-EEEEEeecCCCceeEEEcCEEEECCCcccCCCCCChhhcCceecCCCCEEECC
Confidence 99999999999999999998633 32 345554 5 76 89999999999999999863 32 3555 578899999
Q ss_pred cccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeecccceE
Q 018320 162 RLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGDNVGEV 241 (358)
Q Consensus 162 ~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~~~ 241 (358)
++||+.|+|||+|||+..+ .++..|..||+.||.||++.....++. +|+ ..+++..++++|+++.++
T Consensus 296 ~~~t~~~~Iya~GD~~~~~----------~l~~~A~~~g~~aa~~i~g~~~~~~~~-~p~--~~~~~~~~a~vG~~e~~a 362 (464)
T 2eq6_A 296 RMETSVPGVYAIGDAARPP----------LLAHKAMREGLIAAENAAGKDSAFDYQ-VPS--VVYTSPEWAGVGLTEEEA 362 (464)
T ss_dssp TCBCSSTTEEECGGGTCSS----------CCHHHHHHHHHHHHHHHTTCCCCCCCC-CCE--EECSSSEEEEEECCHHHH
T ss_pred CcccCCCCEEEEeccCCCc----------ccHHHHHHHHHHHHHHhcCCCcccCCC-CCe--EEECCCCEEEEeCCHHHH
Confidence 9999999999999999754 357789999999999999865333455 775 456789999999987642
Q ss_pred E------EEc------------cCCCCceEEEEee--CCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcccHHHHhhcCCc
Q 018320 242 V------HYG------------NFSGTTFGAYWVN--KGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAELETQGLG 300 (358)
Q Consensus 242 ~------~~g------------~~~~~~~~~~~~~--~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l~~~~~~ 300 (358)
. ..+ ..+..+|.+++.+ +|+|+|+|++|+.+.+ ++.++.||+.++|++||.++ +.
T Consensus 363 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~----~~ 438 (464)
T 2eq6_A 363 KRAGYKVKVGKFPLAASGRALTLGGAEGMVKVVGDEETDLLLGVFIVGPQAGELIAEAALALEMGATLTDLALT----VH 438 (464)
T ss_dssp HHTTCCEEEEEEEGGGCHHHHHTSCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHHS----CC
T ss_pred HhcCCCEEEEEEEcCcchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcC----cC
Confidence 1 110 0122357777664 7999999999998765 57889999999999999874 46
Q ss_pred ccCCcCCC
Q 018320 301 FALAVSQK 308 (358)
Q Consensus 301 yap~~~~~ 308 (358)
++|++++.
T Consensus 439 ~~Pt~~e~ 446 (464)
T 2eq6_A 439 PHPTLSES 446 (464)
T ss_dssp CSSCTTHH
T ss_pred CCCChHHH
Confidence 78888765
No 37
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=3.8e-36 Score=298.43 Aligned_cols=276 Identities=17% Similarity=0.201 Sum_probs=215.7
Q ss_pred CCccCCCCCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHH
Q 018320 6 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 85 (358)
Q Consensus 6 ~P~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~ 85 (358)
+|..+++||.+ + +.+.+++.++++.+.. .+++++|||+|++|+|+|..|+++|.+||++++.+++++..+++++
T Consensus 143 ~p~~p~i~G~~--~---~~t~~~~~~~~~~l~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~ 216 (466)
T 3l8k_A 143 ETAKLRLPGVE--Y---CLTSDDIFGYKTSFRK-LPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITLEDQDI 216 (466)
T ss_dssp EECCCCCTTGG--G---SBCHHHHHSTTCSCCS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCCHHH
T ss_pred CccCCCCCCcc--c---eEeHHHHHHHHHHHhh-CCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCCCCHHH
Confidence 46666788876 3 4455666533322322 4799999999999999999999999999999999999997349999
Q ss_pred HHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcC--CCc--EEecCeEEEeeCCCCChhh-hh-ccccc-ccCcEE
Q 018320 86 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLR--DGN--RLPTDMVVVGIGIRPNTSL-FE-GQLTL-EKGGIK 158 (358)
Q Consensus 86 ~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~--~g~--~i~~D~vi~a~G~~p~~~l-~~-~~~~~-~~g~i~ 158 (358)
.+.+.+.++ |+++++++|++++.++++.+ .+.+. +|+ ++++|.|++|+|++|++++ ++ .++.+ ++| |.
T Consensus 217 ~~~l~~~l~---v~i~~~~~v~~i~~~~~~~v-~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~l~l~~~gl~~~~~G-i~ 291 (466)
T 3l8k_A 217 VNTLLSILK---LNIKFNSPVTEVKKIKDDEY-EVIYSTKDGSKKSIFTNSVVLAAGRRPVIPEGAREIGLSISKTG-IV 291 (466)
T ss_dssp HHHHHHHHC---CCEECSCCEEEEEEEETTEE-EEEECCTTSCCEEEEESCEEECCCEEECCCTTTGGGTCCBCSSS-BC
T ss_pred HHHHHhcCE---EEEEECCEEEEEEEcCCCcE-EEEEEecCCceEEEEcCEEEECcCCCcccccchhhcCceeCCCC-Ee
Confidence 999988876 99999999999986432443 46666 666 7999999999999999984 33 34666 466 99
Q ss_pred EeccccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCC--CC-CCCCCCCCeEEEEecCceEEEee
Q 018320 159 VTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEP--DK-TDKFDYLPFFYSRVFTLSWQFYG 235 (358)
Q Consensus 159 vd~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~--~~-~~~~~~~p~~~~~~~~~~~~~~G 235 (358)
||+++||+.|+|||+|||+..+ +++..|..||+.||.||++. .. ...+..+|+ ..+++..++++|
T Consensus 292 vd~~~~t~~~~Iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~--~~~~~~~~a~vG 359 (466)
T 3l8k_A 292 VDETMKTNIPNVFATGDANGLA----------PYYHAAVRMSIAAANNIMANGMPVDYVDVKSIPV--TIYTIPSLSYVG 359 (466)
T ss_dssp CCTTCBCSSTTEEECGGGTCSC----------CSHHHHHHHHHHHHHHHHTTTSCCCCCCSTTSCE--EECSSSCEEEEE
T ss_pred ECCCccCCCCCEEEEEecCCCC----------ccHhHHHHHHHHHHHHHhCCCCCccccCCCCCcE--EEECCCCeEEec
Confidence 9999999999999999999863 46788999999999999986 32 234555664 446788999999
Q ss_pred cccceEEEEc-----------c-------CCCCceEEEEe--eCCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcccHHHH
Q 018320 236 DNVGEVVHYG-----------N-------FSGTTFGAYWV--NKGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAEL 294 (358)
Q Consensus 236 ~~~~~~~~~g-----------~-------~~~~~~~~~~~--~~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l 294 (358)
+++.++...| + .+..+|.|+.. ++|+|||+|++|+++.+ ++.++.||++++|++||.++
T Consensus 360 ~te~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~ 439 (466)
T 3l8k_A 360 ILPSKARKMGIEIVEAEYNMEEDVSAQIYGQKEGVLKLIFERGSMRLIGAWMIGVHSQYLINELGLAVAYGLNAKQLASF 439 (466)
T ss_dssp CCHHHHHHHTCCEEEEEEEGGGSHHHHHHTCCCCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHC
T ss_pred CCHHHHHhCCCCEEEEEEEcccChhheecCCCeEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCcCCHHHHhcc
Confidence 9986532111 0 12235777665 47999999999998655 57889999999999999886
Q ss_pred hhcCCcccCCcCCC
Q 018320 295 ETQGLGFALAVSQK 308 (358)
Q Consensus 295 ~~~~~~yap~~~~~ 308 (358)
. .++|+++++
T Consensus 440 ~----~~~Pt~~e~ 449 (466)
T 3l8k_A 440 A----EQHPSTNEI 449 (466)
T ss_dssp C----CCTTSTTHH
T ss_pred c----cCCCChHHH
Confidence 5 788998876
No 38
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=1.6e-35 Score=293.83 Aligned_cols=274 Identities=19% Similarity=0.236 Sum_probs=216.0
Q ss_pred CCccCCCCCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHH
Q 018320 6 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 85 (358)
Q Consensus 6 ~P~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~ 85 (358)
+|..+++||.+ .+ .+.+++..+ . ..+++++|||||++|+|+|..|+++|.+||++++.+++++. +++++
T Consensus 141 ~p~~p~i~G~~--~~---~~~~~~~~~----~-~~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~-~~~~~ 209 (463)
T 2r9z_A 141 RPIVPRLPGAE--LG---ITSDGFFAL----Q-QQPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQ-FDPLL 209 (463)
T ss_dssp EECCCSCTTGG--GS---BCHHHHHHC----S-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHH
T ss_pred CCCCCCCCCcc--ce---ecHHHHhhh----h-ccCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccccc-cCHHH
Confidence 34555688864 23 344454433 1 24789999999999999999999999999999999999986 89999
Q ss_pred HHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCc-EEecCeEEEeeCCCCChhh--hhc-cccc-ccCcEEEe
Q 018320 86 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGN-RLPTDMVVVGIGIRPNTSL--FEG-QLTL-EKGGIKVT 160 (358)
Q Consensus 86 ~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~-~i~~D~vi~a~G~~p~~~l--~~~-~~~~-~~g~i~vd 160 (358)
.+.+.+.+++.||+++++++|++++.++++ ..+++.+|+ ++++|.|++|+|++|++++ ++. .+.+ ++|+|.||
T Consensus 210 ~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~G~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd 287 (463)
T 2r9z_A 210 SATLAENMHAQGIETHLEFAVAALERDAQG--TTLVAQDGTRLEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSNGMVPTD 287 (463)
T ss_dssp HHHHHHHHHHTTCEEESSCCEEEEEEETTE--EEEEETTCCEEEEESEEEECSCEEESCTTSCHHHHTCCCCTTSCCCCC
T ss_pred HHHHHHHHHHCCCEEEeCCEEEEEEEeCCe--EEEEEeCCcEEEEcCEEEECCCCCcCCCCCCchhcCCccCCCCCEeEC
Confidence 999999999999999999999999864443 467788998 8999999999999999973 332 3555 57889999
Q ss_pred ccccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCCCCC--CCCCCCCeEEEEecCceEEEeeccc
Q 018320 161 GRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKT--DKFDYLPFFYSRVFTLSWQFYGDNV 238 (358)
Q Consensus 161 ~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~--~~~~~~p~~~~~~~~~~~~~~G~~~ 238 (358)
++++|+.|+|||+|||+..+ .++..|..||+.+|.||++.... ..+..+|+. .+++..++++|+++
T Consensus 288 ~~~~t~~~~Iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~p~~--~~~~~~~a~vGl~e 355 (463)
T 2r9z_A 288 AYQNTNVPGVYALGDITGRD----------QLTPVAIAAGRRLAERLFDGQSERKLDYDNIPTV--VFAHPPLSKVGLSE 355 (463)
T ss_dssp TTSBCSSTTEEECGGGGTSC----------CCHHHHHHHHHHHHHHHHSCCTTCCCCCSSCCEE--ECCSSCEEEEECCH
T ss_pred CCCccCCCCEEEEeecCCCc----------ccHHHHHHHHHHHHHHHcCCCCcccCCCCCCCEE--EeCCCCeEEEcCCH
Confidence 99999999999999998643 46778999999999999986422 345567754 45678899999876
Q ss_pred ceEEE-------Ec------------cCCCCceEEEEe--eCCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcccHHHHhh
Q 018320 239 GEVVH-------YG------------NFSGTTFGAYWV--NKGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAELET 296 (358)
Q Consensus 239 ~~~~~-------~g------------~~~~~~~~~~~~--~~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l~~ 296 (358)
.++.. .. .....+|.|++. ++|+|+|+|++|+.+.+ ++.++.||+.++|++||.++.
T Consensus 356 ~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~klv~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~- 434 (463)
T 2r9z_A 356 PEARERLGDVLTVYETSFTPMRYALNEHGPKTAMKLVCAGPEQRVVGVHVIGDGADEMLQGFAVAVKMGATKADFDNTV- 434 (463)
T ss_dssp HHHHHHHCSCEEEEEEEECCGGGTTSSSCCCEEEEEEEETTTTEEEEEEEESTTGGGTSHHHHHHHHTTCBHHHHHTSC-
T ss_pred HHHHhcCCCCEEEEEEEcccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCc-
Confidence 43211 10 111234777665 48999999999987655 688899999999999998765
Q ss_pred cCCcccCCcCCC
Q 018320 297 QGLGFALAVSQK 308 (358)
Q Consensus 297 ~~~~yap~~~~~ 308 (358)
.++|++++.
T Consensus 435 ---~~hPt~~e~ 443 (463)
T 2r9z_A 435 ---AIHPGSAEE 443 (463)
T ss_dssp ---CCSSSSGGG
T ss_pred ---cCCCCHHHH
Confidence 677888876
No 39
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=3.7e-35 Score=282.83 Aligned_cols=240 Identities=21% Similarity=0.373 Sum_probs=197.0
Q ss_pred CCccCCCCCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHH
Q 018320 6 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 85 (358)
Q Consensus 6 ~P~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~ 85 (358)
+|+.+++|| .++++++++.+|+.++++.+. ++++++|||||++|+|+|..|+++|.+||++++.+++++ +++++
T Consensus 112 ~p~~p~i~G--~~~v~~~~~~~~~~~l~~~~~--~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--~~~~~ 185 (367)
T 1xhc_A 112 RAREPQIKG--KEYLLTLRTIFDADRIKESIE--NSGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG--LDEEL 185 (367)
T ss_dssp EECCCCSBT--GGGEECCCSHHHHHHHHHHHH--HHSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT--CCHHH
T ss_pred CCCCCCCCC--cCCEEEEcCHHHHHHHHHHhh--cCCcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc--CCHHH
Confidence 455667888 468999999999999988775 358999999999999999999999999999999999988 89999
Q ss_pred HHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChhhhhcc-cccccCcEEEecccc
Q 018320 86 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQ-LTLEKGGIKVTGRLQ 164 (358)
Q Consensus 86 ~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~-~~~~~g~i~vd~~~~ 164 (358)
.+.+.+.|+++||+++++++|++++. . .+++.+|+ +++|.|++|+|++|++++++.. +..+ ++|.||++||
T Consensus 186 ~~~l~~~l~~~gV~i~~~~~v~~i~~---~---~v~~~~g~-i~~D~vi~a~G~~p~~~ll~~~gl~~~-~gi~Vd~~~~ 257 (367)
T 1xhc_A 186 SNMIKDMLEETGVKFFLNSELLEANE---E---GVLTNSGF-IEGKVKICAIGIVPNVDLARRSGIHTG-RGILIDDNFR 257 (367)
T ss_dssp HHHHHHHHHHTTEEEECSCCEEEECS---S---EEEETTEE-EECSCEEEECCEEECCHHHHHTTCCBS-SSEECCTTSB
T ss_pred HHHHHHHHHHCCCEEEcCCEEEEEEe---e---EEEECCCE-EEcCEEEECcCCCcCHHHHHhCCCCCC-CCEEECCCcc
Confidence 99999999999999999999999962 1 36678887 9999999999999999877654 5555 4599999999
Q ss_pred CCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCC-CCeEEEEecCceEEEeecccceEEE
Q 018320 165 SSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDY-LPFFYSRVFTLSWQFYGDNVGEVVH 243 (358)
Q Consensus 165 t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~-~p~~~~~~~~~~~~~~G~~~~~~~~ 243 (358)
|+.|+|||+|||+..... ...++..|..||+.||.||++.. .++.. +|+.++.++++.++++|+++.+...
T Consensus 258 t~~~~IyA~GD~a~~~~~------~~~~~~~A~~qg~~aa~~i~g~~--~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~ 329 (367)
T 1xhc_A 258 TSAKDVYAIGDCAEYSGI------IAGTAKAAMEQARVLADILKGEP--RRYNFKFRSTVFKFGKLQIAIIGNTKGEGKW 329 (367)
T ss_dssp CSSTTEEECGGGEEBTTB------CCCSHHHHHHHHHHHHHHHTTCC--CCCCSSCCEEEEEETTEEEEEEECCSSCEEE
T ss_pred cCCCCEEEeEeeeecCCC------CccHHHHHHHHHHHHHHHhcCCC--ccCCCCCCceEEEECCceEEEECCCCCCCcc
Confidence 999999999999976432 12478899999999999999865 23444 4555678999999999999876543
Q ss_pred EccCCCCceEEEEeeCCeEEEEEEeCCCH
Q 018320 244 YGNFSGTTFGAYWVNKGRLVGSFLEGGTK 272 (358)
Q Consensus 244 ~g~~~~~~~~~~~~~~g~ilGa~~vg~~~ 272 (358)
. .+|.+++.++|+|+|++++|+..
T Consensus 330 ~-----~~~~k~~~~~~~ilG~~~~g~~~ 353 (367)
T 1xhc_A 330 I-----EDNTKVFYENGKIIGAVVFNDIR 353 (367)
T ss_dssp E-----ETTEEEEC-----CEEEEESCHH
T ss_pred c-----ceEEEEEEECCEEEEEEEECChH
Confidence 3 34888888889999999999643
No 40
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.6e-35 Score=293.73 Aligned_cols=273 Identities=19% Similarity=0.247 Sum_probs=216.5
Q ss_pred Cc-cCCCCCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHH
Q 018320 7 LE-EFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 85 (358)
Q Consensus 7 P~-~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~ 85 (358)
|. .+++||.+ .+ .+.+++..+. ..+++++|||+|++|+|+|..|++.|.+||++++.+++++. +++++
T Consensus 145 p~~~p~i~G~~--~~---~~~~~~~~~~-----~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~-~~~~~ 213 (463)
T 4dna_A 145 PSPHDALPGHE--LC---ITSNEAFDLP-----ALPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSR-FDQDM 213 (463)
T ss_dssp ECCCTTSTTGG--GC---BCHHHHTTCS-----SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHH
T ss_pred cccCCCCCCcc--cc---ccHHHHhhhh-----cCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc-cCHHH
Confidence 44 45678865 22 3444433321 24899999999999999999999999999999999999976 89999
Q ss_pred HHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEE-cCCCcEEecCeEEEeeCCCCChhh--hh-ccccc-ccCcEEEe
Q 018320 86 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVN-LRDGNRLPTDMVVVGIGIRPNTSL--FE-GQLTL-EKGGIKVT 160 (358)
Q Consensus 86 ~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~-~~~g~~i~~D~vi~a~G~~p~~~l--~~-~~~~~-~~g~i~vd 160 (358)
.+.+.+.+++.||++++++.|++++.++++. ..+. +.+|+ +++|.||+|+|++|++++ ++ .++.+ ++|+|.||
T Consensus 214 ~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~-~~v~~~~~g~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd 291 (463)
T 4dna_A 214 RRGLHAAMEEKGIRILCEDIIQSVSADADGR-RVATTMKHGE-IVADQVMLALGRMPNTNGLGLEAAGVRTNELGAIIVD 291 (463)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEECTTSC-EEEEESSSCE-EEESEEEECSCEEESCTTSSTGGGTCCBCTTSCBCCC
T ss_pred HHHHHHHHHHCCCEEECCCEEEEEEEcCCCE-EEEEEcCCCe-EEeCEEEEeeCcccCCCCCCccccCceECCCCCEeEC
Confidence 9999999999999999999999998754554 3577 88887 999999999999999986 33 33666 67889999
Q ss_pred ccccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCCCCC-CCCCCCCeEEEEecCceEEEeecccc
Q 018320 161 GRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKT-DKFDYLPFFYSRVFTLSWQFYGDNVG 239 (358)
Q Consensus 161 ~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~-~~~~~~p~~~~~~~~~~~~~~G~~~~ 239 (358)
+++||+.|+|||+|||+..+ +++..|..||+.+|.||++.... ..+..+|+.+ +.++.++++|+++.
T Consensus 292 ~~~~t~~~~iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~--~~~p~~a~vG~te~ 359 (463)
T 4dna_A 292 AFSRTSTPGIYALGDVTDRV----------QLTPVAIHEAMCFIETEYKNNPTSPDHDLIATAV--FSQPEIGTVGITEE 359 (463)
T ss_dssp TTCBCSSTTEEECSGGGSSC----------CCHHHHHHHHHHHHHHHHSSCCCCCCCSCCCEEE--CSSSCEEEEECCHH
T ss_pred cCCCCCCCCEEEEEecCCCC----------CChHHHHHHHHHHHHHHcCCCCcccCCCCCCEEE--ECCCCeEEecCCHH
Confidence 99999999999999999743 46778999999999999986532 3556677644 56788999999886
Q ss_pred eEEEEc-----------c-------CCCCceEEEEe--eCCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcccHHHHhhcC
Q 018320 240 EVVHYG-----------N-------FSGTTFGAYWV--NKGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAELETQG 298 (358)
Q Consensus 240 ~~~~~g-----------~-------~~~~~~~~~~~--~~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l~~~~ 298 (358)
++...| . ....+|.|+.. ++|+|||+|++|+++.+ ++.++.||++++|++||.++.
T Consensus 360 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~--- 436 (463)
T 4dna_A 360 EAARKFQEIEVYRAEFRPMKATLSGRKEKTIMKLVVNAADRKVVGAHILGHDAGEMAQLLGISLRAGCTKDDFDRTM--- 436 (463)
T ss_dssp HHHHHSSEEEEEEEEECCTTHHHHCCCCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSC---
T ss_pred HHHHcCCCeEEEEEeccccchhhcCCCceEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcc---
Confidence 532111 1 11234767655 58999999999988655 678899999999999998765
Q ss_pred CcccCCcCCC
Q 018320 299 LGFALAVSQK 308 (358)
Q Consensus 299 ~~yap~~~~~ 308 (358)
.++|.+++.
T Consensus 437 -~~hPt~~e~ 445 (463)
T 4dna_A 437 -AVHPTAAEE 445 (463)
T ss_dssp -CCTTCSGGG
T ss_pred -cCCCCHHHH
Confidence 566777776
No 41
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=100.00 E-value=3.9e-35 Score=292.32 Aligned_cols=276 Identities=18% Similarity=0.214 Sum_probs=211.8
Q ss_pred CCccCCCCCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHH
Q 018320 6 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 85 (358)
Q Consensus 6 ~P~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~ 85 (358)
+|..+++||.+.. ++ +.+++..+ . ..+++++|||+|++|+|+|..|+++|.+||++++. .+++. +++++
T Consensus 161 ~p~~p~i~G~~~~-~~---~~~~~~~~----~-~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~l~~-~d~~~ 229 (483)
T 3dgh_A 161 RPRYPDIPGAVEY-GI---TSDDLFSL----D-REPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRS-IVLRG-FDQQM 229 (483)
T ss_dssp EECCCSSTTHHHH-CB---CHHHHTTC----S-SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-CSSTT-SCHHH
T ss_pred CcCCCCCCCcccc-cC---cHHHHhhh----h-hcCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCC-CCCcc-cCHHH
Confidence 4555568886422 22 33343322 1 24789999999999999999999999999999984 66775 89999
Q ss_pred HHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCc-----EEecCeEEEeeCCCCChhhh--hc-ccccccCcE
Q 018320 86 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGN-----RLPTDMVVVGIGIRPNTSLF--EG-QLTLEKGGI 157 (358)
Q Consensus 86 ~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~-----~i~~D~vi~a~G~~p~~~l~--~~-~~~~~~g~i 157 (358)
.+.+.+.|+++||++++++.+++++.++++.+ .+.+.++. ++++|.|++|+|++|+++++ +. .+..++|+|
T Consensus 230 ~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~G~i 308 (483)
T 3dgh_A 230 AELVAASMEERGIPFLRKTVPLSVEKQDDGKL-LVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQKDKI 308 (483)
T ss_dssp HHHHHHHHHHTTCCEEETEEEEEEEECTTSCE-EEEEEETTTCCEEEEEESEEEECSCEEECCGGGTGGGTTCCCBTTBB
T ss_pred HHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcE-EEEEecCCCCceeEEEcCEEEECcccccCcCcCCchhcCccccCCEE
Confidence 99999999999999999999999987545543 35555543 79999999999999999876 32 366645999
Q ss_pred EEeccccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCCCCC-CCCCCCCeEEEEecCceEEEeec
Q 018320 158 KVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKT-DKFDYLPFFYSRVFTLSWQFYGD 236 (358)
Q Consensus 158 ~vd~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~-~~~~~~p~~~~~~~~~~~~~~G~ 236 (358)
.||++++|+.|+|||+|||+.... .++..|..||+.||.||+|.... ..+..+|++ .+.+..++++|+
T Consensus 309 ~vd~~~~t~~~~IyA~GD~~~~~~---------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~--~~~~p~~a~vGl 377 (483)
T 3dgh_A 309 PVDSQEATNVANIYAVGDIIYGKP---------ELTPVAVLAGRLLARRLYGGSTQRMDYKDVATT--VFTPLEYACVGL 377 (483)
T ss_dssp CCCTTCBCSSTTEEECSTTBTTSC---------CCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEE--ECSSSEEEEEEC
T ss_pred EECcCCccCCCCEEEEEcccCCCC---------ccHHHHHHHHHHHHHHHcCCCCCcCCCCCCCEE--EECCCccEEEeC
Confidence 999999999999999999985311 35778999999999999986532 355667754 456788999999
Q ss_pred ccceEEEE--------c-----c-----C---CCCceEEEEe--e-CCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcccH
Q 018320 237 NVGEVVHY--------G-----N-----F---SGTTFGAYWV--N-KGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDL 291 (358)
Q Consensus 237 ~~~~~~~~--------g-----~-----~---~~~~~~~~~~--~-~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl 291 (358)
++.++... . . . ...+|.|+.. + +|+|||+|++|+++.+ ++.++.||++++|++||
T Consensus 378 te~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l 457 (483)
T 3dgh_A 378 SEEDAVKQFGADEIEVFHGYYKPTEFFIPQKSVRYCYLKAVAERHGDQRVYGLHYIGPVAGEVIQGFAAALKSGLTINTL 457 (483)
T ss_dssp CHHHHHHHHCGGGEEEEEEECCCGGGTTTTCCCTTCEEEEEEESSTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHH
T ss_pred CHHHHHhhCCCCCEEEEEEeecchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHH
Confidence 88643210 0 0 0 1234777665 3 6999999999998665 57889999999999999
Q ss_pred HHHhhcCCcccCCcCCC
Q 018320 292 AELETQGLGFALAVSQK 308 (358)
Q Consensus 292 ~~l~~~~~~yap~~~~~ 308 (358)
.++. .++|.+++.
T Consensus 458 ~~~~----~~hPt~~e~ 470 (483)
T 3dgh_A 458 INTV----GIHPTTAEE 470 (483)
T ss_dssp HTSC----CCSSCSGGG
T ss_pred hhcc----cCCCChHHH
Confidence 8855 567777776
No 42
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=3.4e-35 Score=293.57 Aligned_cols=249 Identities=16% Similarity=0.130 Sum_probs=200.1
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEE
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVA 119 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~ 119 (358)
.+++++|||||++|+|+|..|++.|.+||++++.+++++. +++++.+.+.+.|++. |++++++.+++++.++++ + .
T Consensus 173 ~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~-v-~ 248 (492)
T 3ic9_A 173 LPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL-QDEEMKRYAEKTFNEE-FYFDAKARVISTIEKEDA-V-E 248 (492)
T ss_dssp CCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC-CCHHHHHHHHHHHHTT-SEEETTCEEEEEEECSSS-E-E
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc-CCHHHHHHHHHHHhhC-cEEEECCEEEEEEEcCCE-E-E
Confidence 4799999999999999999999999999999999999986 8999999999999988 999999999999874433 3 3
Q ss_pred EEcC--CC--cEEecCeEEEeeCCCCChhh--hhc-cccc-ccCcEEEe-ccccCCCCcEEEEcccccccccccCccccc
Q 018320 120 VNLR--DG--NRLPTDMVVVGIGIRPNTSL--FEG-QLTL-EKGGIKVT-GRLQSSNSSVYAVGDVAAFPLKLLGETRRL 190 (358)
Q Consensus 120 v~~~--~g--~~i~~D~vi~a~G~~p~~~l--~~~-~~~~-~~g~i~vd-~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~ 190 (358)
+.+. +| +++++|.|++|+|++|++++ ++. ++.. ++|.|.|| ++++|+.|+|||+|||+..+
T Consensus 249 v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~~t~~~~IyA~GD~~~~~---------- 318 (492)
T 3ic9_A 249 VIYFDKSGQKTTESFQYVLAATGRKANVDKLGLENTSIELDKKNSPLFDELTLQTSVDHIFVAGDANNTL---------- 318 (492)
T ss_dssp EEEECTTCCEEEEEESEEEECSCCEESCSSSCGGGSCCCBCTTCCBCCCTTTCBCSSTTEEECGGGGTSS----------
T ss_pred EEEEeCCCceEEEECCEEEEeeCCccCCCCCChhhcCCEECCCCCEeECcccccCCCCCEEEEEecCCCC----------
Confidence 5553 67 67999999999999999987 333 3666 67889999 99999999999999999764
Q ss_pred ccHHHHHHHHHHHHHHHcCCCCC--CCCCCCCeEEEEecCceEEEeecccceEEEE-----------c-----c------
Q 018320 191 EHVDSARKSAKHAVAAIMEPDKT--DKFDYLPFFYSRVFTLSWQFYGDNVGEVVHY-----------G-----N------ 246 (358)
Q Consensus 191 ~~~~~A~~~g~~aa~~i~g~~~~--~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~~-----------g-----~------ 246 (358)
+++..|..||+.||.||++.... ..+..+| +..++++.++++|+++.++... + .
T Consensus 319 ~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p--~~~~~~p~~a~vGlte~~a~~~~g~~~g~~~~~~~~~~~~~~~a~~ 396 (492)
T 3ic9_A 319 TLLHEAADDGKVAGTNAGAYPVIAQGQRRAPL--SVVFTEPQVASVGLSLRQIEDLYADQDAANYVVGQVSFEGQGRSRV 396 (492)
T ss_dssp CSHHHHHHHHHHHHHHHHHTTSCCEECCCCCE--EEECSSSEEEEEESCHHHHHHHCSCSSSCCEEEEEEEGGGCHHHHH
T ss_pred ccHHHHHHHHHHHHHHHcCCCCCcccCCCCCc--EEEECCCCeEEecCCHHHHHhccCccCCccEEEEEEEeccchhhhh
Confidence 35778999999999999974321 2333444 4456789999999987654322 1 0
Q ss_pred -CCCCceEEEEe--eCCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcccHHHHhhcCCcccCCcCCC
Q 018320 247 -FSGTTFGAYWV--NKGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAELETQGLGFALAVSQK 308 (358)
Q Consensus 247 -~~~~~~~~~~~--~~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l~~~~~~yap~~~~~ 308 (358)
....+|.|+.. ++|+|||+|++|+++.+ ++.++.||++++|++||.++. ..+|.+++.
T Consensus 397 ~~~~~g~~kli~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~----~~hPt~~e~ 458 (492)
T 3ic9_A 397 MGKNKGLLNVYADRTSGEFLGAEMFGPAAEHIGHLLAWARQQQMTVQAMLTMP----FYHPVIEEG 458 (492)
T ss_dssp TTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHTTSC----CCTTCTHHH
T ss_pred cCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCC----CCCCChHHH
Confidence 11234777665 58999999999998766 577899999999999998765 355666554
No 43
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=2.2e-34 Score=285.69 Aligned_cols=274 Identities=19% Similarity=0.214 Sum_probs=213.0
Q ss_pred CCccCCCCCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHH
Q 018320 6 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 85 (358)
Q Consensus 6 ~P~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~ 85 (358)
+|..+++||.+..+++ +.+++.++ . ..+++++|||+|++|+|+|..|+++|.+||++++.+++++ +++++
T Consensus 149 ~p~~p~i~G~~~~~~~---~~~~~~~~----~-~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--~~~~~ 218 (467)
T 1zk7_A 149 SPAVPPIPGLKESPYW---TSTEALAS----D-TIPERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR--EDPAI 218 (467)
T ss_dssp EECCCCCTTTTTSCCB---CHHHHHHC----S-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT--SCHHH
T ss_pred CCCCCCCCCCCcCcee---cHHHHhcc----c-ccCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC--CCHHH
Confidence 4556678887655554 44444432 1 2479999999999999999999999999999999999988 79999
Q ss_pred HHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChhhh--hc-cccc-ccCcEEEec
Q 018320 86 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLF--EG-QLTL-EKGGIKVTG 161 (358)
Q Consensus 86 ~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~--~~-~~~~-~~g~i~vd~ 161 (358)
.+.+.+.++++||+++++++|++++.+ ++ ...+.+. +.++++|.||+|+|++|+++++ +. .+.. .+|+|.||+
T Consensus 219 ~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~-~~~v~~~-~~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~ 295 (467)
T 1zk7_A 219 GEAVTAAFRAEGIEVLEHTQASQVAHM-DG-EFVLTTT-HGELRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVIDQ 295 (467)
T ss_dssp HHHHHHHHHHTTCEEETTCCEEEEEEE-TT-EEEEEET-TEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCT
T ss_pred HHHHHHHHHhCCCEEEcCCEEEEEEEe-CC-EEEEEEC-CcEEEcCEEEECCCCCcCCCcCCchhcCCcCCCCCCEEECC
Confidence 999999999999999999999999863 22 2345555 5689999999999999998752 32 3555 467899999
Q ss_pred cccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeecccceE
Q 018320 162 RLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGDNVGEV 241 (358)
Q Consensus 162 ~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~~~ 241 (358)
+++|+.|+|||+|||+..+. .+..|..||+.+|.||++......+..+| +..+++..++++|+++.++
T Consensus 296 ~~~t~~~~iya~GD~~~~~~----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~p--~~~~~~~~~a~vG~~~~~a 363 (467)
T 1zk7_A 296 GMRTSNPNIYAAGDCTDQPQ----------FVYVAAAAGTRAAINMTGGDAALDLTAMP--AVVFTDPQVATVGYSEAEA 363 (467)
T ss_dssp TCBCSSTTEEECSTTBSSCC----------CHHHHHHHHHHHHHHHTTCCCCCCCTTCE--EEECSSSEEEEEECCHHHH
T ss_pred CcccCCCCEEEEeccCCCcc----------cHHHHHHHHHHHHHHHcCCCcccCCCCCC--EEEecCCceEEEecCHHHH
Confidence 99999999999999998653 46789999999999999864323445555 4556888999999887542
Q ss_pred E-------EE--c---------cCCCCceEEEEee--CCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcccHHHHhhcCCc
Q 018320 242 V-------HY--G---------NFSGTTFGAYWVN--KGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAELETQGLG 300 (358)
Q Consensus 242 ~-------~~--g---------~~~~~~~~~~~~~--~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l~~~~~~ 300 (358)
. .. . ..+..+|.+++.+ +|+|+|+|++|+.+.+ ++.++.||++++|++||.++. .
T Consensus 364 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~----~ 439 (467)
T 1zk7_A 364 HHDGIETDSRTLTLDNVPRALANFDTRGFIKLVIEEGSHRLIGVQAVAPEAGELIQTAALAIRNRMTVQELADQL----F 439 (467)
T ss_dssp HHTTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSC----C
T ss_pred HhcCCCeEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCc----c
Confidence 1 11 0 1123457777764 8999999999988655 577899999999999998766 3
Q ss_pred ccCCcCCC
Q 018320 301 FALAVSQK 308 (358)
Q Consensus 301 yap~~~~~ 308 (358)
..|.+++.
T Consensus 440 ~~pt~~e~ 447 (467)
T 1zk7_A 440 PYLTMVEG 447 (467)
T ss_dssp CTTSTTHH
T ss_pred CCCCHHHH
Confidence 34555544
No 44
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=100.00 E-value=1.1e-34 Score=286.89 Aligned_cols=276 Identities=21% Similarity=0.236 Sum_probs=215.6
Q ss_pred CCccCCCCCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHH
Q 018320 6 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 85 (358)
Q Consensus 6 ~P~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~ 85 (358)
+|..++++|.+.++++ +..++..+ . ..+++++|||||++|+|+|..|++.|.+||++++.+++++. +++++
T Consensus 140 ~p~~~~~~g~~~~~v~---~~~~~~~~----~-~~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~-~~~~~ 210 (455)
T 2yqu_A 140 APLIPPWAQVDYERVV---TSTEALSF----P-EVPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPT-MDLEV 210 (455)
T ss_dssp EECCCTTBCCCSSSEE---CHHHHTCC----S-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-SCHHH
T ss_pred CCCCCCCCCCCcCcEe---chHHhhcc----c-cCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccc-cCHHH
Confidence 3555567776655665 33343322 1 14789999999999999999999999999999999999986 89999
Q ss_pred HHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChhh--hhc-cccc-ccCcEEEec
Q 018320 86 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSL--FEG-QLTL-EKGGIKVTG 161 (358)
Q Consensus 86 ~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l--~~~-~~~~-~~g~i~vd~ 161 (358)
.+.+.+.+++.||+++++++|++++.++++ ..+++.+|+++++|.||+|+|++|++++ ++. .+.. ++|+|.||+
T Consensus 211 ~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~--v~v~~~~g~~i~~D~vv~A~G~~p~~~~l~~~~~g~~~~~~g~i~vd~ 288 (455)
T 2yqu_A 211 SRAAERVFKKQGLTIRTGVRVTAVVPEAKG--ARVELEGGEVLEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIPVDE 288 (455)
T ss_dssp HHHHHHHHHHHTCEEECSCCEEEEEEETTE--EEEEETTSCEEEESEEEECSCEEECCTTCCGGGGTCCCCTTSCCCCCT
T ss_pred HHHHHHHHHHCCCEEEECCEEEEEEEeCCE--EEEEECCCeEEEcCEEEECcCCCcCCCCCChhhcCCccCCCCcEeECC
Confidence 999999999999999999999999864332 3566778889999999999999999986 333 3555 468899999
Q ss_pred cccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeecccceE
Q 018320 162 RLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGDNVGEV 241 (358)
Q Consensus 162 ~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~~~ 241 (358)
+++|+.|+|||+|||+..+ .++..|..||+.+|.||++......+..+| +..+++..++++|+++.++
T Consensus 289 ~~~t~~~~iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p--~~~~~~~~~a~~G~~~~~a 356 (455)
T 2yqu_A 289 HLRTRVPHIYAIGDVVRGP----------MLAHKASEEGIAAVEHMVRGFGHVDYQAIP--SVVYTHPEIAAVGYTEEEL 356 (455)
T ss_dssp TSBCSSTTEEECGGGSSSC----------CCHHHHHHHHHHHHHHHHHSCCCCCGGGCC--EEECSSSEEEEEECCHHHH
T ss_pred CcccCCCCEEEEecCCCCc----------cCHHHHHHhHHHHHHHHcCCCccCCCCCCC--EEEEcCCceEEEECCHHHH
Confidence 9999999999999998754 357789999999999999864323344455 4567899999999876532
Q ss_pred E------EEc------------cCCCCceEEEEe--eCCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcccHHHHhhcCCc
Q 018320 242 V------HYG------------NFSGTTFGAYWV--NKGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAELETQGLG 300 (358)
Q Consensus 242 ~------~~g------------~~~~~~~~~~~~--~~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l~~~~~~ 300 (358)
. ..+ ..+..+|.+++. ++|+|+|++++|+.+.+ ++.++.+|++++|++|+.++. .
T Consensus 357 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~~~~~~----~ 432 (455)
T 2yqu_A 357 KAQGIPYKVGKFPYSASGRARAMGETEGFIKVLAHAKTDRILGVHGIGARVGDVLAEAALALFFKASAEDLGRAP----H 432 (455)
T ss_dssp HHHTCCEEEEEEEGGGCHHHHHHTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHHSC----C
T ss_pred HHcCCCEEEEEEEcccchHHHhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcc----c
Confidence 1 111 012234777766 48999999999987655 577899999999999998755 5
Q ss_pred ccCCcCCC
Q 018320 301 FALAVSQK 308 (358)
Q Consensus 301 yap~~~~~ 308 (358)
++|++++.
T Consensus 433 ~~Pt~~e~ 440 (455)
T 2yqu_A 433 AHPSLSEI 440 (455)
T ss_dssp CSSCTHHH
T ss_pred CCCCHHHH
Confidence 56887765
No 45
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=100.00 E-value=8.2e-35 Score=290.16 Aligned_cols=250 Identities=20% Similarity=0.256 Sum_probs=205.3
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEE
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVA 119 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~ 119 (358)
.+++++|||+|++|+|+|..|++.|.+|+++++.+++++. +++++.+.+.+.+++.||++++++.|++++.+++ .+ .
T Consensus 190 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~-~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~-~v-~ 266 (484)
T 3o0h_A 190 LPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILRN-FDYDLRQLLNDAMVAKGISIIYEATVSQVQSTEN-CY-N 266 (484)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHHHTCEEESSCCEEEEEECSS-SE-E
T ss_pred cCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccccc-cCHHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCC-EE-E
Confidence 4799999999999999999999999999999999999986 8999999999999999999999999999987433 33 6
Q ss_pred EEcCCCcEEecCeEEEeeCCCCChhh--hh-ccccc-ccCcEEEeccccCCCCcEEEEcccccccccccCcccccccHHH
Q 018320 120 VNLRDGNRLPTDMVVVGIGIRPNTSL--FE-GQLTL-EKGGIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDS 195 (358)
Q Consensus 120 v~~~~g~~i~~D~vi~a~G~~p~~~l--~~-~~~~~-~~g~i~vd~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~ 195 (358)
+.+.+|+++++|.||+|+|++|++.+ ++ .++.+ ++|+|.||++++|+.|+|||+|||+..+ .++..
T Consensus 267 v~~~~g~~i~aD~Vi~A~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~----------~~~~~ 336 (484)
T 3o0h_A 267 VVLTNGQTICADRVMLATGRVPNTTGLGLERAGVKVNEFGAVVVDEKMTTNVSHIWAVGDVTGHI----------QLTPV 336 (484)
T ss_dssp EEETTSCEEEESEEEECCCEEECCTTCCHHHHTCCBCTTSCBCCCTTSBCSSTTEEECGGGGTSC----------CCHHH
T ss_pred EEECCCcEEEcCEEEEeeCCCcCCCCCChhhcCceECCCCCEeECCCCCCCCCCEEEEEecCCCC----------cCHHH
Confidence 78889999999999999999999985 33 34666 5688999999999999999999999743 46778
Q ss_pred HHHHHHHHHHHHcCCCCC-CCCCCCCeEEEEecCceEEEeecccceEEEEc------------------cCCCCceEEEE
Q 018320 196 ARKSAKHAVAAIMEPDKT-DKFDYLPFFYSRVFTLSWQFYGDNVGEVVHYG------------------NFSGTTFGAYW 256 (358)
Q Consensus 196 A~~~g~~aa~~i~g~~~~-~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~~g------------------~~~~~~~~~~~ 256 (358)
|..||+.+|.+|++.... ..+..+|+.+ +++..++++|+++.++...| ..+..+|.|+.
T Consensus 337 A~~~g~~aa~~i~~~~~~~~~~~~~p~~~--~~~p~~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 414 (484)
T 3o0h_A 337 AIHDAMCFVKNAFENTSTTPDYDLITTAV--FSQPEIGTVGLSEEDALHRYKRVEIYRTVFRPMRNVLSGSPEKMFMKLV 414 (484)
T ss_dssp HHHHHHHHHHHHHC---CCCCCTTCCEEE--CCSSCEEEEECCHHHHHHHCSEEEEEEEEECCHHHHHHTCCCCEEEEEE
T ss_pred HHHHHHHHHHHHcCCCCCcCCCCCCcEEE--ECCCCEEEeeCCHHHHHHcCCCEEEEEecCCcchhhccCCCCcEEEEEE
Confidence 999999999999986432 3566677654 56788999999986532211 01123476765
Q ss_pred e--eCCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcccHHHHhhcCCcccCCcCCC
Q 018320 257 V--NKGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAELETQGLGFALAVSQK 308 (358)
Q Consensus 257 ~--~~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l~~~~~~yap~~~~~ 308 (358)
. ++|+|||+|++|+++.+ ++.++.||++++|++||.++. .++|.+++.
T Consensus 415 ~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~----~~hPt~~e~ 465 (484)
T 3o0h_A 415 VDGESRIVVGAHVLGENAGEIAQLIGISLKGKLTKDIFDKTM----AVHPTMSEE 465 (484)
T ss_dssp EETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSC----CCSSCSGGG
T ss_pred EECCCCEEEEEEEECcCHHHHHHHHHHHHHCCCCHHHHhccc----cCCCChHHH
Confidence 5 58999999999988655 678899999999999998865 566777766
No 46
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=100.00 E-value=3.7e-34 Score=286.08 Aligned_cols=268 Identities=25% Similarity=0.366 Sum_probs=215.5
Q ss_pred CCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHh----CCCcEEEEeeCCcccCccCCHHHHHHHHHHH
Q 018320 18 ENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVI----NKINVTMVFPEAHCMARLFTPKIASYYEEYY 93 (358)
Q Consensus 18 ~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~----~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l 93 (358)
++++++++++|+.++++.+. .+++++|||||++|+|+|..|++ .|.+|+++++.+.++++.+++++.+.+.+.+
T Consensus 159 ~~v~~~~~~~d~~~l~~~~~--~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~l~~~~~~~~~~~l 236 (493)
T 1m6i_A 159 SRTTLFRKIGDFRSLEKISR--EVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKV 236 (493)
T ss_dssp HTEEECCSHHHHHHHHHHHH--HCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTTSCHHHHHHHHHHH
T ss_pred CceEEEcCHHHHHHHHHHhh--cCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccccCCHHHHHHHHHHH
Confidence 57999999999999988776 47999999999999999999987 4789999999888887778999999999999
Q ss_pred HhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChhhhhcc-cccc--cCcEEEeccccCCCCcE
Q 018320 94 KSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQ-LTLE--KGGIKVTGRLQSSNSSV 170 (358)
Q Consensus 94 ~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~-~~~~--~g~i~vd~~~~t~~~~V 170 (358)
+++||++++++.|++++.+ ++.+ .+++.+|+++++|.||+++|++|++++++.. +..+ +|+|.||++||| .|+|
T Consensus 237 ~~~GV~v~~~~~V~~i~~~-~~~~-~v~l~dG~~i~aD~Vv~a~G~~pn~~l~~~~gl~~~~~~ggi~Vd~~l~t-~~~I 313 (493)
T 1m6i_A 237 RREGVKVMPNAIVQSVGVS-SGKL-LIKLKDGRKVETDHIVAAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQA-RSNI 313 (493)
T ss_dssp HTTTCEEECSCCEEEEEEE-TTEE-EEEETTSCEEEESEEEECCCEEECCTTHHHHTCCBCTTTCSEECCTTCEE-ETTE
T ss_pred HhcCCEEEeCCEEEEEEec-CCeE-EEEECCCCEEECCEEEECCCCCccHHHHHHcCCccccCCCcEEECCCccc-CCCe
Confidence 9999999999999999863 3333 6788899999999999999999999887653 5554 489999999998 6999
Q ss_pred EEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEec-Cc----------eEEEeecccc
Q 018320 171 YAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVF-TL----------SWQFYGDNVG 239 (358)
Q Consensus 171 yAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~-~~----------~~~~~G~~~~ 239 (358)
||+|||+..+...+|.. ++++|..|..||+.||.||+|.. .++...|+||+.++ +. .+.++|...+
T Consensus 314 yA~GD~a~~~~~~~g~~-~~~~~~~A~~qg~~aa~ni~g~~--~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~~~G~~~~ 390 (493)
T 1m6i_A 314 WVAGDAACFYDIKLGRR-RVEHHDHAVVSGRLAGENMTGAA--KPYWHQSMFWSDLGPDVGYEAIGLVDSSLPTVGVFAK 390 (493)
T ss_dssp EECGGGEEEEETTTEEE-CCCCHHHHHHHHHHHHHHHTSCC--CCCCCCCEEEEESSTTCEEEEEECCCTTSCEEEEEEC
T ss_pred eEeeeeEeccCcccCcc-ccchHHHHHHHHHHHHHHhcCCC--CCcCCcCceeeeeccCcceEEEeccCCCcceEEeecc
Confidence 99999999876655543 56789999999999999999875 57888999999987 33 3444443111
Q ss_pred -----e------------------------EEEE----ccC-------CCCceEEEEeeCCeEEEEEEeCCCHHHHHHHH
Q 018320 240 -----E------------------------VVHY----GNF-------SGTTFGAYWVNKGRLVGSFLEGGTKEEYEAIA 279 (358)
Q Consensus 240 -----~------------------------~~~~----g~~-------~~~~~~~~~~~~g~ilGa~~vg~~~~~~~~~a 279 (358)
+ .... |+. ...+|.++++++|+|+|+.++|. ..++..+.
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~ 469 (493)
T 1m6i_A 391 ATAQDNPKSATEQSGTGIRSESETESEASEITIPPSTPAVPQAPVQGEDYGKGVIFYLRDKVVVGIVLWNI-FNRMPIAR 469 (493)
T ss_dssp CCTTCSHHHHHHHHSCSCHHHHSCSCCCC--------------------CCEEEEEEEETTEEEEEEEESC-CSCHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccCCcEEEEEEeCCEEEEEEEecC-cchHHHHH
Confidence 0 0000 110 11225668889999999999994 45567778
Q ss_pred HHHHcCCCcccHHHH
Q 018320 280 KATRLQPVVEDLAEL 294 (358)
Q Consensus 280 ~ai~~~~~~~dl~~l 294 (358)
.+|+.+.+++++.++
T Consensus 470 ~li~~~~~~~~~~~~ 484 (493)
T 1m6i_A 470 KIIKDGEQHEDLNEV 484 (493)
T ss_dssp HHHHHCCBCSCSTTG
T ss_pred HHHhCCCCCCCHHHH
Confidence 899999998888764
No 47
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=100.00 E-value=1.5e-34 Score=290.60 Aligned_cols=277 Identities=19% Similarity=0.275 Sum_probs=208.8
Q ss_pred CCccCCCCCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHH
Q 018320 6 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 85 (358)
Q Consensus 6 ~P~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~ 85 (358)
+|..+++||.+. .+ .+.+++..+ . ..+++++|||+|++|+|+|..|+++|.+||++++. .+++. +|+++
T Consensus 184 ~p~~p~i~G~~~-~~---~t~~~~~~l----~-~~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~-~~l~~-~d~~~ 252 (519)
T 3qfa_A 184 RPRYLGIPGDKE-YC---ISSDDLFSL----P-YCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRS-ILLRG-FDQDM 252 (519)
T ss_dssp EECCCCCTTHHH-HC---BCHHHHTTC----S-SCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSSTT-SCHHH
T ss_pred CcCCCCCCCccC-ce---EcHHHHhhh----h-hcCCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc-ccccc-CCHHH
Confidence 455557888542 22 234444332 1 24788999999999999999999999999999985 67775 89999
Q ss_pred HHHHHHHHHhCCCEEEcCCeeeEEEEcCC---CcE-EEEEcCCCc---EEecCeEEEeeCCCCChhhh--hc-cccc--c
Q 018320 86 ASYYEEYYKSKGVKFVKGTVLSSFDVDSN---GKV-VAVNLRDGN---RLPTDMVVVGIGIRPNTSLF--EG-QLTL--E 153 (358)
Q Consensus 86 ~~~~~~~l~~~gV~v~~~~~v~~i~~~~~---g~v-~~v~~~~g~---~i~~D~vi~a~G~~p~~~l~--~~-~~~~--~ 153 (358)
.+.+.+.|+++||++++++.+++++..++ +.+ ..+...+|. ++++|.|++++|++|+++++ +. .+.+ +
T Consensus 253 ~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~ 332 (519)
T 3qfa_A 253 ANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEK 332 (519)
T ss_dssp HHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESCSSSCSTTTTCCCCTT
T ss_pred HHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccCCCCChhhcCcEEcCC
Confidence 99999999999999999988888765322 322 223344552 57899999999999999863 33 3555 3
Q ss_pred cCcEEEeccccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCCCCC-CCCCCCCeEEEEecCceEE
Q 018320 154 KGGIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKT-DKFDYLPFFYSRVFTLSWQ 232 (358)
Q Consensus 154 ~g~i~vd~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~-~~~~~~p~~~~~~~~~~~~ 232 (358)
+|+|.||+++||+.|+|||+|||+.... .++..|..||+.||+||++.... ..+..+|+ ..++++.++
T Consensus 333 ~G~I~Vd~~~~Ts~~~IyA~GD~~~g~~---------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~--~~~~~p~~a 401 (519)
T 3qfa_A 333 TGKIPVTDEEQTNVPYIYAIGDILEDKV---------ELTPVAIQAGRLLAQRLYAGSTVKCDYENVPT--TVFTPLEYG 401 (519)
T ss_dssp TCCBCCCTTSBCSSTTEEECGGGBSSSC---------CCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCE--EECSSSCEE
T ss_pred CCeEeeCCCCccCCCCEEEEEeccCCCC---------ccHHHHHHHHHHHHHHHcCCCCccCCCCcCcE--EEECCCceE
Confidence 6889999999999999999999984321 46778999999999999986532 34555665 456789999
Q ss_pred EeecccceEEEE-------------cc--------CCCCceEEEEee---CCeEEEEEEeCCCHHH-HHHHHHHHHcCCC
Q 018320 233 FYGDNVGEVVHY-------------GN--------FSGTTFGAYWVN---KGRLVGSFLEGGTKEE-YEAIAKATRLQPV 287 (358)
Q Consensus 233 ~~G~~~~~~~~~-------------g~--------~~~~~~~~~~~~---~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~ 287 (358)
++|+++.++... .. ....+|.|+..+ +|+|||+|++|+++.+ ++.++.||++++|
T Consensus 402 ~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~~ilGa~i~g~~a~e~i~~~~~ai~~~~t 481 (519)
T 3qfa_A 402 ACGLSEEKAVEKFGEENIEVYHSYFWPLEWTIPSRDNNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLT 481 (519)
T ss_dssp EEECCHHHHHHHHCGGGEEEEEEEECCHHHHTTTCCTTTEEEEEEEETTTTCEEEEEEEESTTHHHHHHHHHHHHHTTCB
T ss_pred EecCCHHHHHhhCCCCCEEEEEEeccchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCC
Confidence 999988643211 00 012357776653 6999999999998655 5778999999999
Q ss_pred cccHHHHhhcCCcccCCcCCC
Q 018320 288 VEDLAELETQGLGFALAVSQK 308 (358)
Q Consensus 288 ~~dl~~l~~~~~~yap~~~~~ 308 (358)
++||.++. .++|++++.
T Consensus 482 ~~~l~~~~----~~hPt~~E~ 498 (519)
T 3qfa_A 482 KKQLDSTI----GIHPVCAEV 498 (519)
T ss_dssp HHHHHHSC----CCTTCGGGG
T ss_pred HHHHhccc----cCCCChHHH
Confidence 99998755 677877776
No 48
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=100.00 E-value=2e-34 Score=287.70 Aligned_cols=276 Identities=21% Similarity=0.252 Sum_probs=209.7
Q ss_pred CCccCC-CCCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHH
Q 018320 6 KLEEFG-LSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPK 84 (358)
Q Consensus 6 ~P~~~~-ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~ 84 (358)
+|..++ +||.+. .++ +.+++..+ . ..+++++|||+|++|+|+|..|+++|.+||++++. .+++. +|++
T Consensus 158 ~p~~p~~i~G~~~-~~~---~~~~~~~~----~-~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~-~~l~~-~d~~ 226 (488)
T 3dgz_A 158 RPRYPTQVKGALE-YGI---TSDDIFWL----K-ESPGKTLVVGASYVALECAGFLTGIGLDTTVMMRS-IPLRG-FDQQ 226 (488)
T ss_dssp EECCCSSCBTHHH-HCB---CHHHHTTC----S-SCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSSTT-SCHH
T ss_pred CCCCCCCCCCccc-ccC---cHHHHHhh----h-hcCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcC-ccccc-CCHH
Confidence 455555 787642 222 33343322 1 25789999999999999999999999999999986 46665 8999
Q ss_pred HHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCC---Cc--EEecCeEEEeeCCCCChhhh--hc-cccc--cc
Q 018320 85 IASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRD---GN--RLPTDMVVVGIGIRPNTSLF--EG-QLTL--EK 154 (358)
Q Consensus 85 ~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~---g~--~i~~D~vi~a~G~~p~~~l~--~~-~~~~--~~ 154 (358)
+.+.+.+.|+++||++++++.+++++..+++.+ .+.+.+ |+ ++++|.|++|+|++|+++++ +. .+.+ ++
T Consensus 227 ~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~-~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~~ 305 (488)
T 3dgz_A 227 MSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQL-QVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKN 305 (488)
T ss_dssp HHHHHHHHHHHTTCEEEETEEEEEEEECTTSCE-EEEEEETTTTEEEEEEESEEEECSCEEESCGGGTGGGGTCCBCSSS
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcE-EEEEEeCCCCeeEEEECCEEEEcccCCcccCcCCccccCcEecCCC
Confidence 999999999999999999999999987444433 344433 54 47999999999999999874 33 3555 36
Q ss_pred CcEEEeccccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCCCCC-CCCCCCCeEEEEecCceEEE
Q 018320 155 GGIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKT-DKFDYLPFFYSRVFTLSWQF 233 (358)
Q Consensus 155 g~i~vd~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~-~~~~~~p~~~~~~~~~~~~~ 233 (358)
|+|.||+++||+.|+|||+|||+.... .++..|..||+.||.||++.... ..+..+|++ .+.++.+++
T Consensus 306 G~i~vd~~~~t~~~~IyA~GD~~~~~~---------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~--~~~~p~~a~ 374 (488)
T 3dgz_A 306 QKIIVDAQEATSVPHIYAIGDVAEGRP---------ELTPTAIKAGKLLAQRLFGKSSTLMDYSNVPTT--VFTPLEYGC 374 (488)
T ss_dssp CCBCCCTTSBCSSTTEEECGGGBTTCC---------CCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEE--ECSSSEEEE
T ss_pred CeEeECCCCccCCCCEEEeEEecCCCC---------cchhHHHHHHHHHHHHHcCCCCccCCCCCCCEE--EECCCCeEE
Confidence 889999999999999999999985321 35778999999999999986532 345567764 456788999
Q ss_pred eecccceEEE--------Ec-----c-----C---CCCceEEEEe---eCCeEEEEEEeCCCHHH-HHHHHHHHHcCCCc
Q 018320 234 YGDNVGEVVH--------YG-----N-----F---SGTTFGAYWV---NKGRLVGSFLEGGTKEE-YEAIAKATRLQPVV 288 (358)
Q Consensus 234 ~G~~~~~~~~--------~g-----~-----~---~~~~~~~~~~---~~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~ 288 (358)
+|+++.++.. .. . . ...+|.|+.. ++|+|||+|++|+++.+ ++.++.||++++|+
T Consensus 375 vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~ 454 (488)
T 3dgz_A 375 VGLSEEEAVALHGQEHVEVYHAYYKPLEFTVADRDASQCYIKMVCMREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASY 454 (488)
T ss_dssp EECCHHHHHHHHCGGGEEEEEEECCCHHHHHTTCCCTTCEEEEEEESSTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBH
T ss_pred EeCCHHHHHhhCCCCcEEEEEccccchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCH
Confidence 9998854321 10 0 0 1235777655 37999999999988655 57889999999999
Q ss_pred ccHHHHhhcCCcccCCcCCC
Q 018320 289 EDLAELETQGLGFALAVSQK 308 (358)
Q Consensus 289 ~dl~~l~~~~~~yap~~~~~ 308 (358)
+||.++. .++|.+++.
T Consensus 455 ~~l~~~~----~~hPt~~e~ 470 (488)
T 3dgz_A 455 AQVMQTV----GIHPTCSEE 470 (488)
T ss_dssp HHHHTSC----CCSSCSTHH
T ss_pred HHHhccc----cCCCChHHH
Confidence 9998755 677887776
No 49
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=100.00 E-value=1.3e-33 Score=288.36 Aligned_cols=277 Identities=20% Similarity=0.276 Sum_probs=209.1
Q ss_pred CCccCCCCCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHH
Q 018320 6 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 85 (358)
Q Consensus 6 ~P~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~ 85 (358)
+|+.+++||.+. .++ +.+++..+ . ..+++++|||||++|+|+|..|+++|.+||++++. .+++. +++++
T Consensus 260 ~p~~p~i~G~~~-~~~---~~~~~~~~----~-~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~l~~-~d~~~ 328 (598)
T 2x8g_A 260 RPKYPEIPGAVE-YGI---TSDDLFSL----P-YFPGKTLVIGASYVALECAGFLASLGGDVTVMVRS-ILLRG-FDQQM 328 (598)
T ss_dssp EECCCSSTTHHH-HCE---EHHHHTTC----S-SCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSSTT-SCHHH
T ss_pred CCCCCCCCCccc-ceE---cHHHHhhC----c-cCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC-cCcCc-CCHHH
Confidence 466667888642 222 22332221 1 24789999999999999999999999999999998 66765 89999
Q ss_pred HHHHHHHHHhCCCEEEcCCeeeEEEEc-----CC---CcE-EEEEcCCCcEEe--cCeEEEeeCCCCChhhh--hc-ccc
Q 018320 86 ASYYEEYYKSKGVKFVKGTVLSSFDVD-----SN---GKV-VAVNLRDGNRLP--TDMVVVGIGIRPNTSLF--EG-QLT 151 (358)
Q Consensus 86 ~~~~~~~l~~~gV~v~~~~~v~~i~~~-----~~---g~v-~~v~~~~g~~i~--~D~vi~a~G~~p~~~l~--~~-~~~ 151 (358)
.+.+.+.|+++||++++++.+++++.. ++ +.+ ..+.+.+|++++ +|.|++|+|++|+++++ +. ++.
T Consensus 329 ~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~~~~~gl~ 408 (598)
T 2x8g_A 329 AEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVLCETVGVK 408 (598)
T ss_dssp HHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEECGGGTBCGGGCCC
T ss_pred HHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCccccCccCchhcCce
Confidence 999999999999999999988888642 11 333 223356787665 99999999999999864 22 355
Q ss_pred c-ccCcEEEeccccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCCCC-CCCCCCCCeEEEEecCc
Q 018320 152 L-EKGGIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDK-TDKFDYLPFFYSRVFTL 229 (358)
Q Consensus 152 ~-~~g~i~vd~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~-~~~~~~~p~~~~~~~~~ 229 (358)
+ ++|+|.||++++|+.|+|||+|||+.... .++..|..||+.||.+|++... ...+..+|+ ..++++
T Consensus 409 ~~~~G~i~vd~~~~ts~~~VyA~GD~~~~~~---------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~p~--~~~~~~ 477 (598)
T 2x8g_A 409 LDKNGRVVCTDDEQTTVSNVYAIGDINAGKP---------QLTPVAIQAGRYLARRLFAGATELTDYSNVAT--TVFTPL 477 (598)
T ss_dssp BCTTSCBCCCTTSBCSSTTEEECGGGBTTSC---------CCHHHHHHHHHHHHHHHHHCCCCCCCCTTCCE--EECSSS
T ss_pred ECCCCcEEeCCCCcCCCCCEEEEeeecCCCC---------ccHHHHHHhHHHHHHHHhcCCCcccCCCCCcE--EEECCC
Confidence 5 56889999999999999999999965321 3677899999999999997543 234555665 456788
Q ss_pred eEEEeecccceEEE--------Ec-----c--------CCCCceEEEEee---CCeEEEEEEeCCCHHH-HHHHHHHHHc
Q 018320 230 SWQFYGDNVGEVVH--------YG-----N--------FSGTTFGAYWVN---KGRLVGSFLEGGTKEE-YEAIAKATRL 284 (358)
Q Consensus 230 ~~~~~G~~~~~~~~--------~g-----~--------~~~~~~~~~~~~---~g~ilGa~~vg~~~~~-~~~~a~ai~~ 284 (358)
.++++|+++.++.. .. . ....+|.|+..+ +|+|||+|++|+++.+ ++.++.||++
T Consensus 478 ~~a~vGl~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~ 557 (598)
T 2x8g_A 478 EYGACGLSEEDAIEKYGDKDIEVYHSNFKPLEWTVAHREDNVCYMKLVCRKSDNMRVLGLHVLGPNAGEITQGYAVAIKM 557 (598)
T ss_dssp CEEEEECCHHHHHHHHCGGGEEEEEEEECCTHHHHTTCCSSCEEEEEEEETTTTTEEEEEEEESTTHHHHHHHHHHHHHT
T ss_pred ceEEEeCCHHHHHhhCCCCcEEEEEEeccchhHHhhcCCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHc
Confidence 99999988654221 10 0 112347776653 7999999999987655 5788999999
Q ss_pred CCCcccHHHHhhcCCcccCCcCCC
Q 018320 285 QPVVEDLAELETQGLGFALAVSQK 308 (358)
Q Consensus 285 ~~~~~dl~~l~~~~~~yap~~~~~ 308 (358)
++|++||.++ +.++|++++.
T Consensus 558 ~~t~~~l~~~----~~~hPt~~e~ 577 (598)
T 2x8g_A 558 GATKADFDRT----IGIHPTCSET 577 (598)
T ss_dssp TCBHHHHHHS----CCCSSCSGGG
T ss_pred CCCHHHHhhc----cccCCCHHHH
Confidence 9999999884 5788888876
No 50
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=3.9e-33 Score=276.18 Aligned_cols=248 Identities=22% Similarity=0.258 Sum_probs=199.8
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEE
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVA 119 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~ 119 (358)
.+++++|||||++|+|+|..|++.|.+||++++.+++++. +++++.+.+.+.++++||+++++++|++++. +. ..
T Consensus 170 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~---~~-v~ 244 (458)
T 1lvl_A 170 LPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPT-YDSELTAPVAESLKKLGIALHLGHSVEGYEN---GC-LL 244 (458)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHHHTCEEETTCEEEEEET---TE-EE
T ss_pred cCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccccc-cCHHHHHHHHHHHHHCCCEEEECCEEEEEEe---CC-EE
Confidence 4799999999999999999999999999999999999985 8999999999999999999999999999974 33 34
Q ss_pred EEcCCC--cEEecCeEEEeeCCCCChhhh--hc-ccccccCcEEEeccccCCCCcEEEEcccccccccccCcccccccHH
Q 018320 120 VNLRDG--NRLPTDMVVVGIGIRPNTSLF--EG-QLTLEKGGIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVD 194 (358)
Q Consensus 120 v~~~~g--~~i~~D~vi~a~G~~p~~~l~--~~-~~~~~~g~i~vd~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~ 194 (358)
+...+| +++++|.|++|+|++|+++++ +. ++..++++|.||++|||+.|+|||+|||+..+ .++.
T Consensus 245 v~~~~G~~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~~i~vd~~~~t~~~~Iya~GD~~~~~----------~~~~ 314 (458)
T 1lvl_A 245 ANDGKGGQLRLEADRVLVAVGRRPRTKGFNLECLDLKMNGAAIAIDERCQTSMHNVWAIGDVAGEP----------MLAH 314 (458)
T ss_dssp EECSSSCCCEECCSCEEECCCEEECCSSSSGGGSCCCEETTEECCCTTCBCSSTTEEECGGGGCSS----------CCHH
T ss_pred EEECCCceEEEECCEEEECcCCCcCCCCCCcHhcCCcccCCEEeECCCCcCCCCCEEEeeccCCCc----------ccHH
Confidence 444456 689999999999999999853 33 35543228999999999999999999999854 3577
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCCCeEEEEecCceEEEeecccceEE------EEc------------cCCCCceEEEE
Q 018320 195 SARKSAKHAVAAIMEPDKTDKFDYLPFFYSRVFTLSWQFYGDNVGEVV------HYG------------NFSGTTFGAYW 256 (358)
Q Consensus 195 ~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~~~~~~~G~~~~~~~------~~g------------~~~~~~~~~~~ 256 (358)
.|..||+.+|.||+|......+..+| +..+++..++++|+++.++. ..+ .....+|.|++
T Consensus 315 ~A~~~g~~aa~~i~g~~~~~~~~~~p--~~~~~~p~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~kl~ 392 (458)
T 1lvl_A 315 RAMAQGEMVAEIIAGKARRFEPAAIA--AVCFTDPEVVVVGKTPEQASQQGLDCIVAQFPFAANGRAMSLESKSGFVRVV 392 (458)
T ss_dssp HHHHHHHHHHHHHTTCCCCCCCSCCC--EEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHTTCCCCEEEEE
T ss_pred HHHHHHHHHHHHhcCCCccCCCCCCC--EEEECCCCeEEEeCCHHHHHHcCCCEEEEEEECccchhhhhcCCCcEEEEEE
Confidence 89999999999999865333344556 45678899999998765321 111 11223577776
Q ss_pred e--eCCeEEEEEEeCCCHHH-HHHHHHHHHcCCCcccHHHHhhcCCcccCCcCCC
Q 018320 257 V--NKGRLVGSFLEGGTKEE-YEAIAKATRLQPVVEDLAELETQGLGFALAVSQK 308 (358)
Q Consensus 257 ~--~~g~ilGa~~vg~~~~~-~~~~a~ai~~~~~~~dl~~l~~~~~~yap~~~~~ 308 (358)
. ++++|+|++++|+.+.+ ++.++.||++++|++||.++. .++|++++.
T Consensus 393 ~d~~~~~ilG~~~vg~~a~e~i~~~~~ai~~~~~~~~l~~~~----~~~Pt~~e~ 443 (458)
T 1lvl_A 393 ARRDNHLILGWQAVGVAVSELSTAFAQSLEMGACLEDVAGTI----HAHPTLGEA 443 (458)
T ss_dssp EETTTCBEEEEEEEETTGGGHHHHHHHHHHHTCBHHHHHTSC----CCTTCTTHH
T ss_pred EECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCc----CCCCCHHHH
Confidence 6 58999999999987554 678899999999999988765 568888754
No 51
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=99.95 E-value=3.1e-27 Score=236.30 Aligned_cols=192 Identities=20% Similarity=0.320 Sum_probs=159.4
Q ss_pred CCccCCCCCCCCCCeEEecCHHHHHHHHHHHhcC---------------CCCcEEEEcCcHHHHHHHHHHHhCC------
Q 018320 6 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSC---------------SGGNAVVIGGGYIGMECAASLVINK------ 64 (358)
Q Consensus 6 ~P~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~---------------~~~~vvVIGgG~~gle~A~~L~~~g------ 64 (358)
+|+.+++||.+ ++.+++++++|+.++++.+... ...+++|||||++|+|+|..|++++
T Consensus 168 ~~~~~~ipG~~-e~a~~l~t~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~ 246 (502)
T 4g6h_A 168 EPNTFGIPGVT-DYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRK 246 (502)
T ss_dssp EECCTTCTTHH-HHCEECSSHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHH
T ss_pred ccccCCccCcc-cccCCCCCHHHHHHHHHHHHHHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHHHh
Confidence 57888999975 6789999999999988765311 1247999999999999999998643
Q ss_pred --------CcEEEEeeCCcccCccCCHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCc----EEecCe
Q 018320 65 --------INVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGN----RLPTDM 132 (358)
Q Consensus 65 --------~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~----~i~~D~ 132 (358)
.+||++++.+++++. +++++++.+++.|+++||++++++.|++++ +++........||+ ++++|+
T Consensus 247 ~~~~~~~~~~V~lve~~~~il~~-~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~--~~~~~~~~~~~dg~~~~~~i~ad~ 323 (502)
T 4g6h_A 247 FLPALAEEVQIHLVEALPIVLNM-FEKKLSSYAQSHLENTSIKVHLRTAVAKVE--EKQLLAKTKHEDGKITEETIPYGT 323 (502)
T ss_dssp HCHHHHHHCEEEEECSSSSSSTT-SCHHHHHHHHHHHHHTTCEEETTEEEEEEC--SSEEEEEEECTTSCEEEEEEECSE
T ss_pred hcccccccceeEEeccccccccC-CCHHHHHHHHHHHHhcceeeecCceEEEEe--CCceEEEEEecCcccceeeeccCE
Confidence 689999999999996 899999999999999999999999999996 34444455666764 699999
Q ss_pred EEEeeCCCCChh---hhhc-cccc-ccCcEEEeccccC-CCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHH
Q 018320 133 VVVGIGIRPNTS---LFEG-QLTL-EKGGIKVTGRLQS-SNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAA 206 (358)
Q Consensus 133 vi~a~G~~p~~~---l~~~-~~~~-~~g~i~vd~~~~t-~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~ 206 (358)
||||+|++|+.. +... .... .+|+|.||++||| ++|+|||+|||+..+.+ +.++.|++||+++|+|
T Consensus 324 viwa~Gv~~~~~~~~l~~~~~~~~~~~g~I~Vd~~lq~~~~~~IfAiGD~a~~~~p--------~~a~~A~qqg~~~A~n 395 (502)
T 4g6h_A 324 LIWATGNKARPVITDLFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAFAGLP--------PTAQVAHQEAEYLAKN 395 (502)
T ss_dssp EEECCCEECCHHHHHHHHHSGGGTTCCSSEEBCTTSBBTTCSSEEECGGGEESSSC--------CCHHHHHHHHHHHHHH
T ss_pred EEEccCCcCCHHHHhHHHhccccccCCCceeECCccccCCCCCEEEEEcccCCCCC--------CchHHHHHHHHHHHHH
Confidence 999999999953 3322 2333 5689999999999 89999999999987654 6788999999999999
Q ss_pred HcC
Q 018320 207 IME 209 (358)
Q Consensus 207 i~g 209 (358)
|.+
T Consensus 396 i~~ 398 (502)
T 4g6h_A 396 FDK 398 (502)
T ss_dssp HHH
T ss_pred HHH
Confidence 854
No 52
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.91 E-value=5.6e-24 Score=183.70 Aligned_cols=153 Identities=16% Similarity=0.131 Sum_probs=128.8
Q ss_pred cEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCc--------cC-----CHHHHHHHHHHHHhCCCEEEcCCeeeEE
Q 018320 43 NAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR--------LF-----TPKIASYYEEYYKSKGVKFVKGTVLSSF 109 (358)
Q Consensus 43 ~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~--------~~-----~~~~~~~~~~~l~~~gV~v~~~~~v~~i 109 (358)
+++|||||++|+|+|..|++.|.+|+++++.+.+++. .+ ++++.+.+.+.+++.||+++++ +++++
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i 81 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRPG-VVKGV 81 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEE
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEE
Confidence 6999999999999999999999999999998766531 12 4788999999999999999999 99999
Q ss_pred EEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChhhhh-cccccccCcEEEeccccCCCCcEEEEcccccccccccCccc
Q 018320 110 DVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFE-GQLTLEKGGIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETR 188 (358)
Q Consensus 110 ~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~-~~~~~~~g~i~vd~~~~t~~~~VyAiGD~~~~~~~~~g~~~ 188 (358)
+.++++ ..+++.+| ++++|.||+|+|.+|+. .+ ..+..++|.|.||++++|+.|+|||+|||+..+.
T Consensus 82 ~~~~~~--~~v~~~~g-~i~ad~vI~A~G~~~~~--~~~~g~~~~~g~i~vd~~~~t~~~~i~a~GD~~~~~~------- 149 (180)
T 2ywl_A 82 RDMGGV--FEVETEEG-VEKAERLLLCTHKDPTL--PSLLGLTRRGAYIDTDEGGRTSYPRVYAAGVARGKVP------- 149 (180)
T ss_dssp EECSSS--EEEECSSC-EEEEEEEEECCTTCCHH--HHHHTCCEETTEECCCTTCBCSSTTEEECGGGGTCCS-------
T ss_pred EEcCCE--EEEEECCC-EEEECEEEECCCCCCCc--cccCCCCccCceEEeCCCCCcCCCCEEEeecccCcch-------
Confidence 874444 45778888 89999999999999853 22 2244457789999999999999999999998753
Q ss_pred ccccHHHHHHHHHHHHHHHcCC
Q 018320 189 RLEHVDSARKSAKHAVAAIMEP 210 (358)
Q Consensus 189 ~~~~~~~A~~~g~~aa~~i~g~ 210 (358)
+++..|..||+.||.||.+.
T Consensus 150 --~~~~~A~~~g~~aa~~i~~~ 169 (180)
T 2ywl_A 150 --GHAIISAGDGAYVAVHLVSD 169 (180)
T ss_dssp --CCHHHHHHHHHHHHHHHHHH
T ss_pred --hhHHHHHHhHHHHHHHHHHH
Confidence 36788999999999999864
No 53
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.91 E-value=3.3e-25 Score=207.28 Aligned_cols=184 Identities=19% Similarity=0.194 Sum_probs=135.2
Q ss_pred CCccCCCCCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHH
Q 018320 6 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 85 (358)
Q Consensus 6 ~P~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~ 85 (358)
+|+.+++||.+......+......+.... ..++++++|||||++|+|+|..|+++|.+||++++.+.+.. +++.
T Consensus 120 ~~~~~~ipG~~~~~~~~~~~~~~~~~~~~---~~~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~~~---~~~~ 193 (314)
T 4a5l_A 120 TAKRMHVPGEDKYWQNGVSACAICDGAVP---IFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRA---SKTM 193 (314)
T ss_dssp EECCCCCTTHHHHBTTTEESCHHHHTTSG---GGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS---CHHH
T ss_pred cccccCCCccccccccceeeehhhhhhhh---hcCCCeEEEECCChHHHHHHHHHHHhCCeeeeecccccccc---cchh
Confidence 46667789876433322333333322211 12579999999999999999999999999999998876543 3332
Q ss_pred HHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEE-----cCCCcEEecCeEEEeeCCCCChhhhhcccccccCcEEEe
Q 018320 86 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVN-----LRDGNRLPTDMVVVGIGIRPNTSLFEGQLTLEKGGIKVT 160 (358)
Q Consensus 86 ~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~-----~~~g~~i~~D~vi~a~G~~p~~~l~~~~~~~~~g~i~vd 160 (358)
..+.+...+++.+....+.++...+ .....+. ..+++++++|.|++++|++||++++...+...++++.||
T Consensus 194 ---~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~i~~d~vi~a~G~~pn~~~l~~~~~~~~~G~iv~ 269 (314)
T 4a5l_A 194 ---QERVLNHPKIEVIWNSELVELEGDG-DLLNGAKIHNLVSGEYKVVPVAGLFYAIGHSPNSKFLGGQVKTADDGYILT 269 (314)
T ss_dssp ---HHHHHTCTTEEEECSEEEEEEEESS-SSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTSSCBCTTSCBCC
T ss_pred ---hhhhhcccceeeEeeeeeEEEEeee-eccceeEEeecccccceeeccccceEecccccChhHhcccceEcCCeeEeC
Confidence 2344566788999888888887632 2222232 234578999999999999999999987666644556699
Q ss_pred ccccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHc
Q 018320 161 GRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIM 208 (358)
Q Consensus 161 ~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~ 208 (358)
++||||+|+|||+|||+..+. .++..|+.||+.||.++.
T Consensus 270 ~~~~Ts~pgIyA~GDv~~~~~---------~~~~~A~~~G~~AA~~~~ 308 (314)
T 4a5l_A 270 EGPKTSVDGVFACGDVCDRVY---------RQAIVAAGSGCMAALSCE 308 (314)
T ss_dssp BTTBCSSTTEEECSTTTCSSC---------CCHHHHHHHHHHHHHHHH
T ss_pred CCCccCCCCEEEEEeccCCcc---------hHHHHHHHHHHHHHHHHH
Confidence 999999999999999998653 246678999999998874
No 54
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.91 E-value=6.5e-24 Score=200.42 Aligned_cols=184 Identities=20% Similarity=0.253 Sum_probs=147.7
Q ss_pred CCCccCCCCCCCC---CCeEE-ecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCcc
Q 018320 5 LKLEEFGLSGSDA---ENVCY-LRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARL 80 (358)
Q Consensus 5 ~~P~~~~ipG~~~---~~v~~-l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~ 80 (358)
..|+.+++||.+. .++++ +++.++ ..+++++|||+|.+|+|+|..|++.|.+|+++++.+.+++
T Consensus 122 ~~p~~~~i~g~~~~~~~~~~~~~~~~~~----------~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~-- 189 (335)
T 2zbw_A 122 FEPRRIGAPGEREFEGRGVYYAVKSKAE----------FQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA-- 189 (335)
T ss_dssp EEECCCCCTTTTTTBTTTEESSCSCGGG----------GTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS--
T ss_pred CCCCCCCCCChhhccCcEEEEecCchhh----------cCCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc--
Confidence 3566677888642 23432 222221 1579999999999999999999999999999999988765
Q ss_pred CCHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcC---CC--cEEecCeEEEeeCCCCChhhhhcc-ccccc
Q 018320 81 FTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLR---DG--NRLPTDMVVVGIGIRPNTSLFEGQ-LTLEK 154 (358)
Q Consensus 81 ~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~---~g--~~i~~D~vi~a~G~~p~~~l~~~~-~~~~~ 154 (358)
.++..+.+.+.+++.||++++++.+++++. ++.+..+.+. +| +++++|.|++++|++|++++++.. +..++
T Consensus 190 -~~~~~~~l~~~l~~~gv~v~~~~~v~~i~~--~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~~ 266 (335)
T 2zbw_A 190 -HEASVKELMKAHEEGRLEVLTPYELRRVEG--DERVRWAVVFHNQTQEELALEVDAVLILAGYITKLGPLANWGLALEK 266 (335)
T ss_dssp -CHHHHHHHHHHHHTTSSEEETTEEEEEEEE--SSSEEEEEEEETTTCCEEEEECSEEEECCCEEEECGGGGGSCCCEET
T ss_pred -cHHHHHHHHhccccCCeEEecCCcceeEcc--CCCeeEEEEEECCCCceEEEecCEEEEeecCCCCchHhhhcceeccC
Confidence 467788888999999999999999999986 3444456655 67 579999999999999999887654 55567
Q ss_pred CcEEEeccccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCC
Q 018320 155 GGIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEP 210 (358)
Q Consensus 155 g~i~vd~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~ 210 (358)
|+|.||++++|+.|+|||+|||+..+.. ..++..|..||+.+|.+|.+.
T Consensus 267 g~i~vd~~~~t~~~~vya~GD~~~~~~~-------~~~~~~A~~~g~~aa~~i~~~ 315 (335)
T 2zbw_A 267 NKIKVDTTMATSIPGVYACGDIVTYPGK-------LPLIVLGFGEAAIAANHAAAY 315 (335)
T ss_dssp TEEECCTTCBCSSTTEEECSTTEECTTC-------CCCHHHHHHHHHHHHHHHHHH
T ss_pred CeeeeCCCCCCCCCCEEEeccccccCcc-------hhhhhhhHHHHHHHHHHHHHH
Confidence 8999999999999999999999986431 256888999999999999764
No 55
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.91 E-value=5.7e-24 Score=199.26 Aligned_cols=180 Identities=22% Similarity=0.285 Sum_probs=134.0
Q ss_pred CCccCCCCCCCC---CCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCC
Q 018320 6 KLEEFGLSGSDA---ENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFT 82 (358)
Q Consensus 6 ~P~~~~ipG~~~---~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~ 82 (358)
+|+.++|||.+. .+++++... |.. ..++|+++|||||++|+|+|..|+++|.+||++++.+++++..
T Consensus 115 ~~~~~~ipG~~~~~~~~v~~~~~~-~~~-------~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~~~~-- 184 (312)
T 4gcm_A 115 EYKKIGVPGEQELGGRGVSYCAVC-DGA-------FFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQR-- 184 (312)
T ss_dssp EECCCCCTTTTTTBTTTEESCHHH-HGG-------GGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCSCH--
T ss_pred ccCcCCCCChhhhCCccEEeeecc-Ccc-------ccCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEecccccCcch--
Confidence 466677898764 345433221 111 1258999999999999999999999999999999999887641
Q ss_pred HHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCC--cEEEEEc--CCCcEEecCeEEEeeCCCCChhhhhcc-cccccCcE
Q 018320 83 PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNG--KVVAVNL--RDGNRLPTDMVVVGIGIRPNTSLFEGQ-LTLEKGGI 157 (358)
Q Consensus 83 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g--~v~~v~~--~~g~~i~~D~vi~a~G~~p~~~l~~~~-~~~~~g~i 157 (358)
....+.+++.++.......+..+...+.. ....... .++..+++|.|++++|.+|++.++... +..++|+|
T Consensus 185 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~~g~~~~~G~I 260 (312)
T 4gcm_A 185 ----ILQDRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKDLGITNDVGYI 260 (312)
T ss_dssp ----HHHHHHHHCTTEEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGGGGTCBCTTSCB
T ss_pred ----hHHHHHHHhcCcceeeecceeeeeccccccccceeeeecCCceeEEeeeeEEeecCCCcCchhHHhcceecCCCeE
Confidence 12235567788888888777666542221 1111222 234579999999999999999988766 44578899
Q ss_pred EEeccccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHc
Q 018320 158 KVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIM 208 (358)
Q Consensus 158 ~vd~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~ 208 (358)
.||++||||+|+|||+|||+..+. .++..|+.||+.||.+|.
T Consensus 261 ~vd~~~~Ts~pgIyA~GDv~~~~~---------~~~~~A~~~G~~AA~~i~ 302 (312)
T 4gcm_A 261 VTKDDMTTSVPGIFAAGDVRDKGL---------RQIVTATGDGSIAAQSAA 302 (312)
T ss_dssp CCCTTSBCSSTTEEECSTTBSCSC---------CSHHHHHHHHHHHHHHHH
T ss_pred eeCCCCccCCCCEEEEeecCCCcc---------hHHHHHHHHHHHHHHHHH
Confidence 999999999999999999987432 357789999999999985
No 56
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.90 E-value=1e-23 Score=197.58 Aligned_cols=182 Identities=25% Similarity=0.287 Sum_probs=144.9
Q ss_pred CccCCCCCCC---CCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCH
Q 018320 7 LEEFGLSGSD---AENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTP 83 (358)
Q Consensus 7 P~~~~ipG~~---~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~ 83 (358)
|..+++||.+ ..+++++.+.++. +. .+++++|||+|++|+|+|..|++.|.+||++++.+.+. .++
T Consensus 116 ~~~~~~~g~~~~~~~~~~~~~~~~~~------~~--~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---~~~ 184 (320)
T 1trb_A 116 ARYLGLPSEEAFKGRGVSACATSDGF------FY--RNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR---AEK 184 (320)
T ss_dssp ECCCCCHHHHHTBTTTEESCHHHHGG------GG--TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC---CCH
T ss_pred cCCCCCCChHHhCCceeEecccCCcc------cc--CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccc---cCH
Confidence 4445567643 2355544333221 22 57999999999999999999999999999999988764 367
Q ss_pred HHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCC----C--cEEecCeEEEeeCCCCChhhhhcccccccCcE
Q 018320 84 KIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRD----G--NRLPTDMVVVGIGIRPNTSLFEGQLTLEKGGI 157 (358)
Q Consensus 84 ~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~----g--~~i~~D~vi~a~G~~p~~~l~~~~~~~~~g~i 157 (358)
.+.+.+.+.+++.||++++++++++++.+ ++.+..+.+.+ | +++++|.||+|+|++|++++++..+..++|+|
T Consensus 185 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~~~~~l~~~~G~i 263 (320)
T 1trb_A 185 ILIKRLMDKVENGNIILHTNRTLEEVTGD-QMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFEGQLELENGYI 263 (320)
T ss_dssp HHHHHHHHHHHTSSEEEECSCEEEEEEEC-SSSEEEEEEECCTTCCCCEEEECSEEEECSCEEESCGGGTTTSCEETTEE
T ss_pred HHHHHHHHhcccCCeEEEcCceeEEEEcC-CCceEEEEEEeccCCCceEEEEcCEEEEEeCCCCChHHhcccccccCceE
Confidence 88888889999999999999999999873 44555566644 4 57999999999999999998875555558899
Q ss_pred EEeccc-----cCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcC
Q 018320 158 KVTGRL-----QSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIME 209 (358)
Q Consensus 158 ~vd~~~-----~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 209 (358)
.||+++ +|+.|+|||+|||+..+. ..+..|..||+.||.+|..
T Consensus 264 ~vd~~~~~~~~~t~~~~vya~GD~~~~~~---------~~~~~A~~~g~~aa~~i~~ 311 (320)
T 1trb_A 264 KVQSGIHGNATQTSIPGVFAAGDVMDHIY---------RQAITSAGTGCMAALDAER 311 (320)
T ss_dssp CCCCSSSSCTTBCSSTTEEECGGGGCSSS---------CCHHHHHHHHHHHHHHHHH
T ss_pred EECCCcccccccCCCCCEEEcccccCCcc---------hhhhhhhccHHHHHHHHHH
Confidence 999987 899999999999998642 3577899999999999864
No 57
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.90 E-value=1.5e-23 Score=200.28 Aligned_cols=187 Identities=26% Similarity=0.376 Sum_probs=147.9
Q ss_pred CCCCccCCCCC-CC-C--CCeEE-ecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccC
Q 018320 4 ALKLEEFGLSG-SD-A--ENVCY-LRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMA 78 (358)
Q Consensus 4 ~~~P~~~~ipG-~~-~--~~v~~-l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~ 78 (358)
+..|+.+++|| .+ . .++++ +++..+ ..+++++|||+|++|+|+|..|++.|.+|+++++.+.+.+
T Consensus 131 ~~~~~~~~i~g~~~~~~~~~v~~~~~~~~~----------~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~ 200 (360)
T 3ab1_A 131 AFEPRKLPQLGNIDHLTGSSVYYAVKSVED----------FKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQG 200 (360)
T ss_dssp SCCBCCCGGGCCCTTTBTTTEESSCSCGGG----------GTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSS
T ss_pred cCCCCCCCCCCchhhCcCceEEEecCCHHH----------cCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCC
Confidence 44677777787 42 2 23543 232221 2579999999999999999999999999999999987765
Q ss_pred ccCCHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcC--CC--cEEecCeEEEeeCCCCChhhhhcc-cccc
Q 018320 79 RLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLR--DG--NRLPTDMVVVGIGIRPNTSLFEGQ-LTLE 153 (358)
Q Consensus 79 ~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~--~g--~~i~~D~vi~a~G~~p~~~l~~~~-~~~~ 153 (358)
. ++..+.+.+.+++.||++++++++++++. +++.+..+.+. +| +++++|.||+++|++|++++++.. +..+
T Consensus 201 ~---~~~~~~l~~~~~~~gv~i~~~~~v~~i~~-~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~ 276 (360)
T 3ab1_A 201 H---GKTAHEVERARANGTIDVYLETEVASIEE-SNGVLTRVHLRSSDGSKWTVEADRLLILIGFKSNLGPLARWDLELY 276 (360)
T ss_dssp C---SHHHHSSHHHHHHTSEEEESSEEEEEEEE-ETTEEEEEEEEETTCCEEEEECSEEEECCCBCCSCGGGGGSSCCEE
T ss_pred C---HHHHHHHHHHhhcCceEEEcCcCHHHhcc-CCCceEEEEEEecCCCeEEEeCCEEEECCCCCCCHHHHHhhccccc
Confidence 2 45667778888899999999999999986 34555456553 77 579999999999999999887654 5556
Q ss_pred cCcEEEeccccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCCC
Q 018320 154 KGGIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPD 211 (358)
Q Consensus 154 ~g~i~vd~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~ 211 (358)
+|+|.||++++|+.|+|||+|||+..+.. ..++..|..||+.||.+|.+..
T Consensus 277 ~g~i~vd~~~~t~~~~vya~GD~~~~~~~-------~~~~~~A~~~g~~aa~~i~~~l 327 (360)
T 3ab1_A 277 ENALVVDSHMKTSVDGLYAAGDIAYYPGK-------LKIIQTGLSEATMAVRHSLSYI 327 (360)
T ss_dssp TTEEECCTTSBCSSTTEEECSTTEECTTC-------CCSHHHHHHHHHHHHHHHHHHH
T ss_pred cCeeeecCCCcCCCCCEEEecCccCCCCc-------cceeehhHHHHHHHHHHHHhhc
Confidence 78999999999999999999999986431 2568889999999999998643
No 58
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.90 E-value=4.4e-23 Score=192.63 Aligned_cols=178 Identities=24% Similarity=0.370 Sum_probs=138.1
Q ss_pred CccCCCCCCC---CCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCH
Q 018320 7 LEEFGLSGSD---AENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTP 83 (358)
Q Consensus 7 P~~~~ipG~~---~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~ 83 (358)
|..+++||.+ .++++++.. +.... ..+++++|||+|++|+|+|..|++.|.+||++++.+++. +++
T Consensus 115 ~~~~~~~g~~~~~~~~~~~~~~------~~~~~--~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---~~~ 183 (310)
T 1fl2_A 115 WRNMNVPGEDQYRTKGVTYCPH------CDGPL--FKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK---ADQ 183 (310)
T ss_dssp ECCCCCTTTTTTBTTTEESCHH------HHGGG--GBTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC---SCH
T ss_pred cCCCCCCChhhcccceeEEecc------CcHhh--cCCCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC---ccH
Confidence 4455677764 244554321 11112 257999999999999999999999999999999998762 454
Q ss_pred HHHHHHHHHHHh-CCCEEEcCCeeeEEEEcCCCcEEEEEcCC---Cc--EEecCeEEEeeCCCCChhhhhccccc-ccCc
Q 018320 84 KIASYYEEYYKS-KGVKFVKGTVLSSFDVDSNGKVVAVNLRD---GN--RLPTDMVVVGIGIRPNTSLFEGQLTL-EKGG 156 (358)
Q Consensus 84 ~~~~~~~~~l~~-~gV~v~~~~~v~~i~~~~~g~v~~v~~~~---g~--~i~~D~vi~a~G~~p~~~l~~~~~~~-~~g~ 156 (358)
. +.+.|++ .||++++++++++++. +++++..+++.+ |+ ++++|.|++++|++|+++++...+.+ ++|+
T Consensus 184 ~----~~~~l~~~~gv~v~~~~~v~~i~~-~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~l~~~~~g~ 258 (310)
T 1fl2_A 184 V----LQDKLRSLKNVDIILNAQTTEVKG-DGSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTNWLEGAVERNRMGE 258 (310)
T ss_dssp H----HHHHHHTCTTEEEESSEEEEEEEE-SSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTTSCBCTTSC
T ss_pred H----HHHHHhhCCCeEEecCCceEEEEc-CCCcEEEEEEEECCCCcEEEEEcCEEEEeeCCccCchHHhccccccCCCc
Confidence 3 4555666 6999999999999986 345555565543 53 68999999999999999888755555 5789
Q ss_pred EEEeccccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcC
Q 018320 157 IKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIME 209 (358)
Q Consensus 157 i~vd~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 209 (358)
|.||++++|+.|+|||+|||+..+. ..+..|+.||+.||.+|..
T Consensus 259 i~vd~~~~t~~~~vya~GD~~~~~~---------~~~~~A~~~g~~aa~~i~~ 302 (310)
T 1fl2_A 259 IIIDAKCETNVKGVFAAGDCTTVPY---------KQIIIATGEGAKASLSAFD 302 (310)
T ss_dssp BCCCTTCBCSSTTEEECSTTBSCSS---------CCHHHHHHHHHHHHHHHHH
T ss_pred EEcCCCCccCCCCEEEeecccCCcc---------hhhhhhHhhHHHHHHHHHH
Confidence 9999999999999999999998653 3577899999999999864
No 59
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.90 E-value=2.6e-23 Score=195.79 Aligned_cols=179 Identities=22% Similarity=0.320 Sum_probs=138.3
Q ss_pred CCccCCCCCCCC---CCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCC
Q 018320 6 KLEEFGLSGSDA---ENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFT 82 (358)
Q Consensus 6 ~P~~~~ipG~~~---~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~ 82 (358)
+|+.+++||.+. ++++++...++ .. ..+++++|||+|++|+|+|..|++.|.+||++++.+.+. .+
T Consensus 122 ~~~~~~i~g~~~~~~~~~~~~~~~~~------~~--~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---~~ 190 (325)
T 2q7v_A 122 DPRKLGIPGEDNFWGKGVSTCATCDG------FF--YKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLR---AN 190 (325)
T ss_dssp EECCCCCTTTTTTBTTTEESCHHHHG------GG--GTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC---SC
T ss_pred CcCCCCCCChhhccCceEEEeccCCH------HH--cCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCC---cc
Confidence 355566788653 45554432221 11 157999999999999999999999999999999988754 24
Q ss_pred HHHHHHHHHHHH-hCCCEEEcCCeeeEEEEcCCCcEEEEEcC---CCc--EEecCeEEEeeCCCCChhhhhccccc-ccC
Q 018320 83 PKIASYYEEYYK-SKGVKFVKGTVLSSFDVDSNGKVVAVNLR---DGN--RLPTDMVVVGIGIRPNTSLFEGQLTL-EKG 155 (358)
Q Consensus 83 ~~~~~~~~~~l~-~~gV~v~~~~~v~~i~~~~~g~v~~v~~~---~g~--~i~~D~vi~a~G~~p~~~l~~~~~~~-~~g 155 (358)
+.+ .+.+. +.||+++++++++++.. ++.+..+.+. +|+ ++++|.||+|+|++|++++++..+.+ ++|
T Consensus 191 ~~~----~~~l~~~~gv~i~~~~~v~~i~~--~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~~g 264 (325)
T 2q7v_A 191 KVA----QARAFANPKMKFIWDTAVEEIQG--ADSVSGVKLRNLKTGEVSELATDGVFIFIGHVPNTAFVKDTVSLRDDG 264 (325)
T ss_dssp HHH----HHHHHTCTTEEEECSEEEEEEEE--SSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTTSCBCTTS
T ss_pred hHH----HHHHHhcCCceEecCCceEEEcc--CCcEEEEEEEECCCCcEEEEEcCEEEEccCCCCChHHHhhhcccCCCc
Confidence 443 33343 46999999999999986 3444456554 665 79999999999999999988765555 578
Q ss_pred cEEEeccccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCC
Q 018320 156 GIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEP 210 (358)
Q Consensus 156 ~i~vd~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~ 210 (358)
+|.||++++|+.|+|||+|||+..+. .++..|..||+.||.+|...
T Consensus 265 ~i~vd~~~~t~~~~vya~GD~~~~~~---------~~~~~A~~~g~~aa~~i~~~ 310 (325)
T 2q7v_A 265 YVDVRDEIYTNIPMLFAAGDVSDYIY---------RQLATSVGAGTRAAMMTERQ 310 (325)
T ss_dssp CBCCBTTTBCSSTTEEECSTTTCSSC---------CCHHHHHHHHHHHHHHHHHH
T ss_pred cEecCCCCccCCCCEEEeecccCccH---------HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999997631 46788999999999999753
No 60
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.90 E-value=3.3e-23 Score=194.55 Aligned_cols=178 Identities=25% Similarity=0.377 Sum_probs=139.2
Q ss_pred CccCCCCCCCC---CCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCH
Q 018320 7 LEEFGLSGSDA---ENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTP 83 (358)
Q Consensus 7 P~~~~ipG~~~---~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~ 83 (358)
|+.+++||.+. .++++.++.++. . ..+++++|||+|++|+|+|..|++.|.+||++++.+.+. .++
T Consensus 126 ~~~~~i~g~~~~~~~~~~~~~~~~~~------~--~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~---~~~ 194 (319)
T 3cty_A 126 HKHLGVKGESEYFGKGTSYCSTCDGY------L--FKGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYM---CEN 194 (319)
T ss_dssp ECCCCCBTTTTTBTTTEESCHHHHGG------G--GBTSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCC---SCH
T ss_pred cccCCCCChHHhCCceEEEEEecchh------h--cCCCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccC---CCH
Confidence 55566777642 456544332211 1 147899999999999999999999999999999988753 244
Q ss_pred HHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcC---CCc--EEecCeEEEeeCCCCChhhhhcc-ccc-ccCc
Q 018320 84 KIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLR---DGN--RLPTDMVVVGIGIRPNTSLFEGQ-LTL-EKGG 156 (358)
Q Consensus 84 ~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~---~g~--~i~~D~vi~a~G~~p~~~l~~~~-~~~-~~g~ 156 (358)
. +.+.+++.||+++++++++++.. +++++..+.+. +|+ ++++|.||+|+|++|++++++.. +.+ ++|+
T Consensus 195 ~----l~~~l~~~gv~i~~~~~v~~i~~-~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~~g~ 269 (319)
T 3cty_A 195 A----YVQEIKKRNIPYIMNAQVTEIVG-DGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIPQTSFLKDSGVKLDERGY 269 (319)
T ss_dssp H----HHHHHHHTTCCEECSEEEEEEEE-SSSSEEEEEEEETTTCCEEEECCSEEEECCCEEECCGGGTTSCCCBCTTSC
T ss_pred H----HHHHHhcCCcEEEcCCeEEEEec-CCceEEEEEEEEcCCCceEEEecCEEEEeeCCccChHHHhhccccccCCcc
Confidence 3 34556688999999999999986 34445555554 665 69999999999999999988754 555 5689
Q ss_pred EEEeccccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcC
Q 018320 157 IKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIME 209 (358)
Q Consensus 157 i~vd~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 209 (358)
|.||++++|+.|+|||+|||+..+. .++..|..||+.||.+|..
T Consensus 270 i~vd~~~~t~~~~vya~GD~~~~~~---------~~~~~A~~~g~~aa~~i~~ 313 (319)
T 3cty_A 270 IVVDSRQRTSVPGVYAAGDVTSGNF---------AQIASAVGDGCKAALSLYS 313 (319)
T ss_dssp BCCCTTCBCSSTTEEECSTTBTTCC---------CCHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCCccCCCCEEEeecccCcch---------hhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998632 3577899999999999864
No 61
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.90 E-value=2e-23 Score=195.05 Aligned_cols=179 Identities=18% Similarity=0.255 Sum_probs=138.6
Q ss_pred CCccCCCCCCCC---CCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCC
Q 018320 6 KLEEFGLSGSDA---ENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFT 82 (358)
Q Consensus 6 ~P~~~~ipG~~~---~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~ 82 (358)
.|+.+++||.+. ++++++++.++. . ..+++++|||+|++|+|+|..|++.|.+||++++.+.+. .+
T Consensus 113 ~~~~~~~~g~~~~~~~~~~~~~~~~~~------~--~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---~~ 181 (311)
T 2q0l_A 113 SPKRTGIKGESEYWGKGVSTCATCDGF------F--YKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR---CA 181 (311)
T ss_dssp EECCCCCBTHHHHBTTTEESCHHHHGG------G--GTTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC---SC
T ss_pred CCCCCCCCChhhccCCcEEEeecCChh------h--cCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC---CC
Confidence 345556777532 456655443321 1 157999999999999999999999999999999988763 35
Q ss_pred HHHHHHHHHHHH-hCCCEEEcCCeeeEEEEcCCCcEEEEEcC---CCc--EEecCeEEEeeCCCCChhhhhcc-----cc
Q 018320 83 PKIASYYEEYYK-SKGVKFVKGTVLSSFDVDSNGKVVAVNLR---DGN--RLPTDMVVVGIGIRPNTSLFEGQ-----LT 151 (358)
Q Consensus 83 ~~~~~~~~~~l~-~~gV~v~~~~~v~~i~~~~~g~v~~v~~~---~g~--~i~~D~vi~a~G~~p~~~l~~~~-----~~ 151 (358)
+++ .+.+. +.||++++++.+++++.+ ++.+..+.+. +|+ ++++|.|++++|++|++++++.. +.
T Consensus 182 ~~~----~~~l~~~~gv~v~~~~~v~~i~~~-~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~g~~~~l~ 256 (311)
T 2q0l_A 182 PIT----LEHAKNNDKIEFLTPYVVEEIKGD-ASGVSSLSIKNTATNEKRELVVPGFFIFVGYDVNNAVLKQEDNSMLCK 256 (311)
T ss_dssp HHH----HHHHHTCTTEEEETTEEEEEEEEE-TTEEEEEEEEETTTCCEEEEECSEEEECSCEEECCGGGBCTTSCBSSC
T ss_pred HHH----HHHHhhCCCeEEEeCCEEEEEECC-CCcEeEEEEEecCCCceEEEecCEEEEEecCccChhhhhcccccceeE
Confidence 543 34444 479999999999999863 3444455554 665 79999999999999999988754 55
Q ss_pred c-ccCcEEEeccccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcC
Q 018320 152 L-EKGGIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIME 209 (358)
Q Consensus 152 ~-~~g~i~vd~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 209 (358)
+ ++|+|.||+++||+.|+|||+|||+..+. .++..|..||+.||.+|..
T Consensus 257 ~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~---------~~~~~A~~~g~~aa~~i~~ 306 (311)
T 2q0l_A 257 CDEYGSIVVDFSMKTNVQGLFAAGDIRIFAP---------KQVVCAASDGATAALSVIS 306 (311)
T ss_dssp BCTTSCBCCCTTCBCSSTTEEECSTTBTTCC---------CCHHHHHHHHHHHHHHHHH
T ss_pred eccCCCEEeCCccccCCCCeEEcccccCcch---------HHHHHHHHhHHHHHHHHHH
Confidence 5 57899999999999999999999998631 4688899999999999864
No 62
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.90 E-value=4.1e-23 Score=192.57 Aligned_cols=180 Identities=18% Similarity=0.259 Sum_probs=141.0
Q ss_pred CCccCCCCCCCC---CCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCC
Q 018320 6 KLEEFGLSGSDA---ENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFT 82 (358)
Q Consensus 6 ~P~~~~ipG~~~---~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~ 82 (358)
+|+.+++||.+. +.+++....+ ... ..+++++|||+|++|+|+|..|.+.|.+|+++++.+.+. .+
T Consensus 117 ~~~~~~~~g~~~~~~~~~~~~~~~~------~~~--~~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~---~~ 185 (315)
T 3r9u_A 117 APKKAGFKGEDEFFGKGVSTCATCD------GFF--YKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFR---AA 185 (315)
T ss_dssp EECCCCCBTTTTTBTTTEESCHHHH------GGG--GTTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCB---SC
T ss_pred CCCCCCCCChhhcCCCeEEeeeccc------ccc--cCcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCC---CC
Confidence 455666888764 5555432221 111 157999999999999999999999999999999988763 34
Q ss_pred HHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcC--CCc--EEecCeEEEeeCCCCChhhhhc-----cccc-
Q 018320 83 PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLR--DGN--RLPTDMVVVGIGIRPNTSLFEG-----QLTL- 152 (358)
Q Consensus 83 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~--~g~--~i~~D~vi~a~G~~p~~~l~~~-----~~~~- 152 (358)
+++ +.+.+++.||++++++.+++++. +++.+..+.+. +|+ ++++|.|++++|.+|++.++.. .+..
T Consensus 186 ~~~---~~~~~~~~gv~~~~~~~v~~i~~-~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~g~l~~~ 261 (315)
T 3r9u_A 186 PST---VEKVKKNEKIELITSASVDEVYG-DKMGVAGVKVKLKDGSIRDLNVPGIFTFVGLNVRNEILKQDDSKFLCNME 261 (315)
T ss_dssp HHH---HHHHHHCTTEEEECSCEEEEEEE-ETTEEEEEEEECTTSCEEEECCSCEEECSCEEECCGGGBCTTSCBSSCBC
T ss_pred HHH---HHHHHhcCCeEEEeCcEEEEEEc-CCCcEEEEEEEcCCCCeEEeecCeEEEEEcCCCCchhhhcccccceeeec
Confidence 443 34555789999999999999986 34455555554 775 7999999999999999998876 3555
Q ss_pred ccCcEEEeccccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcC
Q 018320 153 EKGGIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIME 209 (358)
Q Consensus 153 ~~g~i~vd~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 209 (358)
++|+|.||++++|+.|+|||+|||+..+. ..+..|+.||+.||.+|..
T Consensus 262 ~~g~i~vd~~~~t~~~~v~a~GD~~~~~~---------~~~~~A~~~g~~aa~~i~~ 309 (315)
T 3r9u_A 262 EGGQVSVDLKMQTSVAGLFAAGDLRKDAP---------KQVICAAGDGAVAALSAMA 309 (315)
T ss_dssp TTSCBCCCTTCBCSSTTEEECGGGBTTCC---------CCHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEeCCCcccCCCCEEEeecccCCch---------hhhhhHHhhHHHHHHHHHH
Confidence 56899999999999999999999986431 4678899999999999863
No 63
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.89 E-value=6.1e-23 Score=192.81 Aligned_cols=181 Identities=19% Similarity=0.278 Sum_probs=141.2
Q ss_pred CCCccCCCCCCCC---CCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccC
Q 018320 5 LKLEEFGLSGSDA---ENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLF 81 (358)
Q Consensus 5 ~~P~~~~ipG~~~---~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~ 81 (358)
..|+.+++||.+. ..+++ .+.+...+ ++++++|||+|.+|+|+|..|++.|.+|+++++.+++.+ .
T Consensus 124 ~~p~~~~~~g~~~~~g~~~~~--~~~~~~~~-------~~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~--~ 192 (332)
T 3lzw_A 124 FKPRKLELENAEQYEGKNLHY--FVDDLQKF-------AGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA--H 192 (332)
T ss_dssp CEECCCCCTTGGGGBTTTEES--SCSCGGGG-------BTCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSS--C
T ss_pred CCCCCCCCCChhhccCceEEE--ecCCHHHc-------CCCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCc--c
Confidence 3677777888753 34443 33333222 579999999999999999999999999999999988754 2
Q ss_pred CHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCC-----CcEEecCeEEEeeCCCCChhhhhcc-cccccC
Q 018320 82 TPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRD-----GNRLPTDMVVVGIGIRPNTSLFEGQ-LTLEKG 155 (358)
Q Consensus 82 ~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~-----g~~i~~D~vi~a~G~~p~~~l~~~~-~~~~~g 155 (358)
++. .+.|++.||++++++.+++++.+++ ...+.+.+ ++++++|.||+++|++|++++++.. +..++|
T Consensus 193 ~~~-----~~~l~~~gv~~~~~~~v~~i~~~~~--~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~~~~g 265 (332)
T 3lzw_A 193 EHS-----VENLHASKVNVLTPFVPAELIGEDK--IEQLVLEEVKGDRKEILEIDDLIVNYGFVSSLGPIKNWGLDIEKN 265 (332)
T ss_dssp HHH-----HHHHHHSSCEEETTEEEEEEECSSS--CCEEEEEETTSCCEEEEECSEEEECCCEECCCGGGGGSSCCEETT
T ss_pred HHH-----HHHHhcCCeEEEeCceeeEEecCCc--eEEEEEEecCCCceEEEECCEEEEeeccCCCchHHhhcCccccCC
Confidence 332 3447889999999999999986332 33455544 4579999999999999999987654 556789
Q ss_pred cEEEeccccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCC
Q 018320 156 GIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEP 210 (358)
Q Consensus 156 ~i~vd~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~ 210 (358)
+|.||++++|+.|+|||+|||+..+.. ..++..|..||+.||.+|+..
T Consensus 266 ~i~vd~~~~t~~~~vya~GD~~~~~~~-------~~~~~~A~~~g~~aa~~i~~~ 313 (332)
T 3lzw_A 266 SIVVKSTMETNIEGFFAAGDICTYEGK-------VNLIASGFGEAPTAVNNAKAY 313 (332)
T ss_dssp EEECCTTSBCSSTTEEECGGGEECTTC-------CCCHHHHHHHHHHHHHHHHHH
T ss_pred eEEeCCCCceecCCEEEccceecCCCC-------cceEeeehhhHHHHHHHHHHh
Confidence 999999999999999999999975421 256889999999999998753
No 64
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.89 E-value=6.4e-23 Score=193.41 Aligned_cols=155 Identities=19% Similarity=0.225 Sum_probs=125.6
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCC-cEE
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNG-KVV 118 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g-~v~ 118 (358)
.+++++|||+|++|+|+|..|++.|.+|+++++.+.+.. .+.+ .++.+++.||++++++++++++.++++ .+.
T Consensus 158 ~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~---~~~~---~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~ 231 (333)
T 1vdc_A 158 RNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA---SKIM---QQRALSNPKIDVIWNSSVVEAYGDGERDVLG 231 (333)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS---CHHH---HHHHHTCTTEEEECSEEEEEEEESSSSSSEE
T ss_pred CCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc---cHHH---HHHHHhCCCeeEecCCceEEEeCCCCcccee
Confidence 579999999999999999999999999999999887543 3322 224456789999999999999864321 444
Q ss_pred EEEcC---CC--cEEecCeEEEeeCCCCChhhhhccccc-ccCcEEEecc-ccCCCCcEEEEcccccccccccCcccccc
Q 018320 119 AVNLR---DG--NRLPTDMVVVGIGIRPNTSLFEGQLTL-EKGGIKVTGR-LQSSNSSVYAVGDVAAFPLKLLGETRRLE 191 (358)
Q Consensus 119 ~v~~~---~g--~~i~~D~vi~a~G~~p~~~l~~~~~~~-~~g~i~vd~~-~~t~~~~VyAiGD~~~~~~~~~g~~~~~~ 191 (358)
.+.+. +| +++++|.||+++|++|++++++..+.. ++|+|.||++ ++|+.|+|||+|||+..+. .
T Consensus 232 ~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~~l~~~~~G~i~vd~~~~~t~~~~vya~GD~~~~~~---------~ 302 (333)
T 1vdc_A 232 GLKVKNVVTGDVSDLKVSGLFFAIGHEPATKFLDGGVELDSDGYVVTKPGTTQTSVPGVFAAGDVQDKKY---------R 302 (333)
T ss_dssp EEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTSSCBCTTSCBCCCTTSCBCSSTTEEECGGGGCSSC---------C
T ss_pred eEEEEecCCCceEEEecCEEEEEeCCccchHHhhccccccCCCCEEechhhcccCCCCEEEeeeccCCCc---------h
Confidence 45554 45 579999999999999999988755655 5789999987 6899999999999998642 3
Q ss_pred cHHHHHHHHHHHHHHHcC
Q 018320 192 HVDSARKSAKHAVAAIME 209 (358)
Q Consensus 192 ~~~~A~~~g~~aa~~i~g 209 (358)
.+..|..||+.||.+|..
T Consensus 303 ~~~~A~~~g~~aa~~i~~ 320 (333)
T 1vdc_A 303 QAITAAGTGCMAALDAEH 320 (333)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHhHHHHHHHHHH
Confidence 577899999999999864
No 65
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.88 E-value=1.7e-22 Score=188.79 Aligned_cols=180 Identities=26% Similarity=0.346 Sum_probs=139.7
Q ss_pred CccCCCCCCCC---CCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCH
Q 018320 7 LEEFGLSGSDA---ENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTP 83 (358)
Q Consensus 7 P~~~~ipG~~~---~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~ 83 (358)
|..+++||.+. +++++. ...+. . ...+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++ ++
T Consensus 125 ~~~~~i~g~~~~~~~~~~~~-~~~~~-----~--~~~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~---~~ 193 (323)
T 3f8d_A 125 RRKLGVPGEQEFAGRGISYC-SVADA-----P--LFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA---QP 193 (323)
T ss_dssp ECCCCCTTTTTTBTTTEESC-HHHHG-----G--GGTTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS---CH
T ss_pred CccCCCCchhhhcCCceEEe-ccCCH-----h--HcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc---CH
Confidence 55567888764 566542 11111 1 12579999999999999999999999999999999988765 33
Q ss_pred HHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCC---Cc--EEecCeEEEeeCCCCChhhhhcc-ccc-ccCc
Q 018320 84 KIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRD---GN--RLPTDMVVVGIGIRPNTSLFEGQ-LTL-EKGG 156 (358)
Q Consensus 84 ~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~---g~--~i~~D~vi~a~G~~p~~~l~~~~-~~~-~~g~ 156 (358)
++ +++.+++.||++++++.+++++.+ +.+..+++.+ |+ ++++|.|++++|++|++++++.. +.. ++|+
T Consensus 194 ~~---~~~~~~~~gv~~~~~~~v~~i~~~--~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~g~~~~~~g~ 268 (323)
T 3f8d_A 194 IY---VETVKKKPNVEFVLNSVVKEIKGD--KVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGY 268 (323)
T ss_dssp HH---HHHHHTCTTEEEECSEEEEEEEES--SSEEEEEEEETTTCCEEEEECSEEEECCCEECCHHHHHHTTCCBCTTSS
T ss_pred HH---HHHHHhCCCcEEEeCCEEEEEecc--CceeEEEEEECCCCceEEEEcCEEEEEECCCCChhHHhhcCeeecCCCc
Confidence 32 233334559999999999999863 4455566654 76 79999999999999999887654 665 6799
Q ss_pred EEEeccccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcC
Q 018320 157 IKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIME 209 (358)
Q Consensus 157 i~vd~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 209 (358)
|.||++++|+.|+|||+|||+..+. ....+..|..||+.||.+|..
T Consensus 269 i~vd~~~~t~~~~vya~GD~~~~~~-------~~~~~~~A~~~g~~aa~~i~~ 314 (323)
T 3f8d_A 269 IKVDEWMRTSVPGVFAAGDCTSAWL-------GFRQVITAVAQGAVAATSAYR 314 (323)
T ss_dssp BCCCTTCBCSSTTEEECSTTBSTTT-------TCCCHHHHHHHHHHHHHHHHH
T ss_pred EecCCCceecCCCEEEcceecCCCC-------cccceeehhhHHHHHHHHHHH
Confidence 9999999999999999999998630 124688999999999999864
No 66
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.88 E-value=1.5e-22 Score=190.70 Aligned_cols=181 Identities=20% Similarity=0.231 Sum_probs=138.7
Q ss_pred CCccCCCCCCC---CCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCC
Q 018320 6 KLEEFGLSGSD---AENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFT 82 (358)
Q Consensus 6 ~P~~~~ipG~~---~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~ 82 (358)
+|..+++||.+ ...+++... ....+....+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++
T Consensus 141 ~~~~~~~~g~~~~~~~~~~~~~~------~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~---- 210 (338)
T 3itj_A 141 SAKRMHLPGEETYWQKGISACAV------CDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA---- 210 (338)
T ss_dssp EECCCCCTTHHHHBTTTEESCHH------HHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS----
T ss_pred CcCCCCCCCchhccCccEEEchh------cccchhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC----
Confidence 35556677753 234543321 22221122579999999999999999999999999999999987655
Q ss_pred HHHHHHHHHHHHhC-CCEEEcCCeeeEEEEcCCCcEEEEEcCC-----CcEEecCeEEEeeCCCCChhhhhccccc-ccC
Q 018320 83 PKIASYYEEYYKSK-GVKFVKGTVLSSFDVDSNGKVVAVNLRD-----GNRLPTDMVVVGIGIRPNTSLFEGQLTL-EKG 155 (358)
Q Consensus 83 ~~~~~~~~~~l~~~-gV~v~~~~~v~~i~~~~~g~v~~v~~~~-----g~~i~~D~vi~a~G~~p~~~l~~~~~~~-~~g 155 (358)
...+.+.+.+. ||++++++.+++++. +++.+..+.+.+ ++++++|.||+++|++|++.+++..+.. ++|
T Consensus 211 ---~~~~~~~l~~~~gv~i~~~~~v~~i~~-~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~~l~~~~~G 286 (338)
T 3itj_A 211 ---STIMQKRAEKNEKIEILYNTVALEAKG-DGKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPATKIVAGQVDTDEAG 286 (338)
T ss_dssp ---CHHHHHHHHHCTTEEEECSEEEEEEEE-SSSSEEEEEEEETTTTEEEEEECSEEEECSCEEECCGGGBTTBCBCTTS
T ss_pred ---CHHHHHHHHhcCCeEEeecceeEEEEc-ccCcEEEEEEEECCCCceEEEEeCEEEEEeCCCCChhHhhCceEecCCC
Confidence 23344556554 999999999999987 344455566655 4679999999999999999988776666 578
Q ss_pred cEEE-eccccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcC
Q 018320 156 GIKV-TGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIME 209 (358)
Q Consensus 156 ~i~v-d~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 209 (358)
+|.+ |++++|+.|+|||+|||+..+. ..+..|+.||+.||.+|..
T Consensus 287 ~i~v~~~~~~t~~~~vya~GD~~~~~~---------~~~~~A~~~g~~aa~~i~~ 332 (338)
T 3itj_A 287 YIKTVPGSSLTSVPGFFAAGDVQDSKY---------RQAITSAGSGCMAALDAEK 332 (338)
T ss_dssp CBCCCTTSSBCSSTTEEECGGGGCSSC---------CCHHHHHHHHHHHHHHHHH
T ss_pred cEEEcCcccccCCCCEEEeeccCCCCc---------cceeeehhhhHHHHHHHHH
Confidence 8885 8899999999999999997432 4577899999999999864
No 67
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.87 E-value=3.8e-22 Score=197.16 Aligned_cols=186 Identities=22% Similarity=0.339 Sum_probs=138.5
Q ss_pred CCccCCCCCCCCCCeEEecCHHHHHHHHHH----------HhcCCCCcEEEEcCcHHHHHHHHHHHhCCCc-EEEEeeCC
Q 018320 6 KLEEFGLSGSDAENVCYLRDLADANRLVNV----------MKSCSGGNAVVIGGGYIGMECAASLVINKIN-VTMVFPEA 74 (358)
Q Consensus 6 ~P~~~~ipG~~~~~v~~l~~~~da~~i~~~----------l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~-Vtlv~~~~ 74 (358)
.|+.+++||.+.++|++...+-........ .....+++|+|||||++|+|+|..+.+.|.+ ||+++|.+
T Consensus 219 ~~~~~~ipG~~~~gv~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~ 298 (456)
T 2vdc_G 219 KARDIKAPGSGLGNIVAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRD 298 (456)
T ss_dssp EECCTTCSCCTTTTEEEHHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCCCCCCCCCcCCCcEEHHHHHHHhhhhhcccccccccccccccCCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCC
Confidence 466778999988999864332221111100 0113579999999999999999999999985 99999988
Q ss_pred cc-cCccCCHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEc---------C---------CC--cEEecCeE
Q 018320 75 HC-MARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNL---------R---------DG--NRLPTDMV 133 (358)
Q Consensus 75 ~~-l~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~---------~---------~g--~~i~~D~v 133 (358)
.. ++. .+.+ .+.+++.||++++++.++++.. ++++..+++ . +| .++++|.|
T Consensus 299 ~~~~p~-~~~e-----~~~~~~~Gv~~~~~~~~~~i~~--~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~V 370 (456)
T 2vdc_G 299 RKNMPG-SQRE-----VAHAEEEGVEFIWQAAPEGFTG--DTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLV 370 (456)
T ss_dssp STTCSS-CHHH-----HHHHHHTTCEEECCSSSCCEEE--EEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEE
T ss_pred ccCCCC-CHHH-----HHHHHHCCCEEEeCCCceEEeC--CCcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEE
Confidence 76 664 3333 2457788999999999999874 343221211 1 23 46999999
Q ss_pred EEeeCCCCChh--hhhcc-ccc-ccCcEEEecc-ccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHc
Q 018320 134 VVGIGIRPNTS--LFEGQ-LTL-EKGGIKVTGR-LQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIM 208 (358)
Q Consensus 134 i~a~G~~p~~~--l~~~~-~~~-~~g~i~vd~~-~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~ 208 (358)
|+|+|++|++. ++... +.+ ++|+|.||++ ++|+.|+|||+|||+..+ .++..|+.||+.||.+|.
T Consensus 371 i~A~G~~p~~~~~~l~~~gl~~~~~G~i~vd~~~~~Ts~~~VfA~GD~~~g~----------~~v~~A~~~G~~aA~~i~ 440 (456)
T 2vdc_G 371 IKALGFEPEDLPNAFDEPELKVTRWGTLLVDHRTKMTNMDGVFAAGDIVRGA----------SLVVWAIRDGRDAAEGIH 440 (456)
T ss_dssp EECSCEECCCHHHHHHSTTSCBCTTSSBCCCTTTCBCSSTTEEECGGGGSSC----------CSHHHHHHHHHHHHHHHH
T ss_pred EECCCCCCCcchhhcccCCeeECCCCCEEECCCCCcCCCCCEEEeccccCCc----------hHHHHHHHHHHHHHHHHH
Confidence 99999999876 55543 555 6789999997 999999999999998764 357789999999999987
Q ss_pred C
Q 018320 209 E 209 (358)
Q Consensus 209 g 209 (358)
.
T Consensus 441 ~ 441 (456)
T 2vdc_G 441 A 441 (456)
T ss_dssp H
T ss_pred H
Confidence 4
No 68
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.87 E-value=2.8e-22 Score=185.30 Aligned_cols=171 Identities=19% Similarity=0.119 Sum_probs=134.3
Q ss_pred CCccCCCCCCCC---CCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCC
Q 018320 6 KLEEFGLSGSDA---ENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFT 82 (358)
Q Consensus 6 ~P~~~~ipG~~~---~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~ 82 (358)
+|+.+++||.+. .++++... .+. . ...+++++|||+|++|+|+|..|.+.| +|+++++.+.. ++
T Consensus 111 ~~~~~~~~g~~~~~~~~~~~~~~-~~~------~-~~~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~~----~~ 177 (297)
T 3fbs_A 111 TDELPEIAGLRERWGSAVFHCPY-CHG------Y-ELDQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIVE----PD 177 (297)
T ss_dssp EEECCCCBTTGGGBTTTEESCHH-HHT------G-GGTTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTCC----CC
T ss_pred CCCCCCCCCchhhcCCeeEEccc-Ccc------h-hhcCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCCC----CC
Confidence 355556777653 45554321 111 1 125899999999999999999999999 99999987651 34
Q ss_pred HHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChhhhhcc-cccc---cC-cE
Q 018320 83 PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQ-LTLE---KG-GI 157 (358)
Q Consensus 83 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~-~~~~---~g-~i 157 (358)
+ .+.+.|++.||+++. +.+++++. ++ .+.+.+|+++++|.|++++|++|++++++.. +..+ .| +|
T Consensus 178 ~----~~~~~l~~~gv~i~~-~~v~~i~~--~~---~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~g~~~~~~~~G~~i 247 (297)
T 3fbs_A 178 A----DQHALLAARGVRVET-TRIREIAG--HA---DVVLADGRSIALAGLFTQPKLRITVDWIEKLGCAVEEGPMGSTI 247 (297)
T ss_dssp H----HHHHHHHHTTCEEEC-SCEEEEET--TE---EEEETTSCEEEESEEEECCEEECCCSCHHHHTCCEEEETTEEEE
T ss_pred H----HHHHHHHHCCcEEEc-ceeeeeec--CC---eEEeCCCCEEEEEEEEEccCcccCchhHHhcCCccccCCCCceE
Confidence 3 346778889999996 89999974 22 5778899999999999999999999887654 5443 35 79
Q ss_pred EEeccccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcC
Q 018320 158 KVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIME 209 (358)
Q Consensus 158 ~vd~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 209 (358)
.||++++|+.|+|||+|||+..+ ..+..|..||+.||.+|..
T Consensus 248 ~vd~~~~t~~~~vya~GD~~~~~----------~~~~~A~~~g~~aa~~i~~ 289 (297)
T 3fbs_A 248 VTDPMKQTTARGIFACGDVARPA----------GSVALAVGDGAMAGAAAHR 289 (297)
T ss_dssp CCCTTCBCSSTTEEECSGGGCTT----------CCHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCccCCCCEEEEeecCCch----------HHHHHHHHhHHHHHHHHHH
Confidence 99999999999999999999863 4578899999999999864
No 69
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.86 E-value=1.5e-21 Score=189.92 Aligned_cols=187 Identities=20% Similarity=0.248 Sum_probs=152.6
Q ss_pred CCccCCCCCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcH-------------------------HHHHHH---
Q 018320 6 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGY-------------------------IGMECA--- 57 (358)
Q Consensus 6 ~P~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~-------------------------~gle~A--- 57 (358)
+|+.+++||.+. +++++.+.+++.++++.+.... ++++|||+|. +++|+|
T Consensus 112 ~~~~~~ipG~~~-~~~~~~~~~~~~~~~~~l~~~~-~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~ 189 (409)
T 3h8l_A 112 HLATELVKGWDK-YGYSVCEPEFATKLREKLESFQ-GGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLML 189 (409)
T ss_dssp EECGGGSBTHHH-HCEESSSTTHHHHHHHHHHHCC-SEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHH
T ss_pred CcCccCCCChhh-cCcCcCCHHHHHHHHHHHHHhc-CCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHH
Confidence 455566888753 6788889999999998887643 5677999992 577777
Q ss_pred -HHHHhCCC----cEEEEeeCCcccCccCCHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCe
Q 018320 58 -ASLVINKI----NVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDM 132 (358)
Q Consensus 58 -~~L~~~g~----~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~ 132 (358)
..|.+.|. +|+++++.+ +++. +++++.+.+.+.+++.||+++++++|++++. + .+.+.+|+++++|.
T Consensus 190 ~~~l~~~g~~~~~~v~~~~~~~-~l~~-~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~--~----~v~~~~g~~~~~D~ 261 (409)
T 3h8l_A 190 HGYFKKKGMLDKVHVTVFSPGE-YLSD-LSPNSRKAVASIYNQLGIKLVHNFKIKEIRE--H----EIVDEKGNTIPADI 261 (409)
T ss_dssp HHHHHTTTCTTTEEEEEECSSS-SSTT-BCHHHHHHHHHHHHHHTCEEECSCCEEEECS--S----EEEETTSCEEECSE
T ss_pred HHHHHHcCCCCCeEEEEEeCCc-cccc-cCHHHHHHHHHHHHHCCCEEEcCCceEEECC--C----eEEECCCCEEeeeE
Confidence 45567784 899999988 6765 8999999999999999999999999999963 2 36788999999999
Q ss_pred EEEeeCCCCChhhhhc--ccccccCcEEEeccccC-CCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcC
Q 018320 133 VVVGIGIRPNTSLFEG--QLTLEKGGIKVTGRLQS-SNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIME 209 (358)
Q Consensus 133 vi~a~G~~p~~~l~~~--~~~~~~g~i~vd~~~~t-~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 209 (358)
+++++|.+|+..+... .+..++|+|.||+++|| +.|+|||+|||+..+.+ ..+..|..||+.||.||.+
T Consensus 262 vi~a~G~~~~~~l~~~~~~l~~~~G~i~vd~~~~~~~~~~vfa~GD~~~~~~~--------~~~~~A~~q~~~aa~~i~~ 333 (409)
T 3h8l_A 262 TILLPPYTGNPALKNSTPDLVDDGGFIPTDLNMVSIKYDNVYAVGDANSMTVP--------KLGYLAVMTGRIAAQHLAN 333 (409)
T ss_dssp EEEECCEECCHHHHTSCGGGSCTTSCBCBBTTSBBSSCTTEEECGGGBTTCCS--------CCHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCccHHHHhccccCcCCCCCEEeCcccccCCCCCEEEeehhccCCCC--------cHHHHHHHHHHHHHHHHHH
Confidence 9999999999655444 24336788999999999 99999999999986432 4677899999999999976
Q ss_pred C
Q 018320 210 P 210 (358)
Q Consensus 210 ~ 210 (358)
.
T Consensus 334 ~ 334 (409)
T 3h8l_A 334 R 334 (409)
T ss_dssp H
T ss_pred H
Confidence 4
No 70
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.86 E-value=3.6e-22 Score=188.93 Aligned_cols=178 Identities=23% Similarity=0.310 Sum_probs=133.6
Q ss_pred CccCCCCCCCC---CCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCH
Q 018320 7 LEEFGLSGSDA---ENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTP 83 (358)
Q Consensus 7 P~~~~ipG~~~---~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~ 83 (358)
|..+++||.+. ..++++.+.++ .+. .+++++|||+|++|+|+|..|++.|.+||++++.+.+.. ..
T Consensus 126 ~~~~~i~g~~~~~~~~~~~~~~~~~------~~~--~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~---~~ 194 (335)
T 2a87_A 126 ARYLQVPGEQELLGRGVSSCATCDG------FFF--RDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRA---SK 194 (335)
T ss_dssp ECCCCCTHHHHTBTTTEESCHHHHG------GGG--TTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSS---CT
T ss_pred ccCCCCCchHhccCCceEEeeccch------hhc--CCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCc---cH
Confidence 44556777531 34554333222 122 579999999999999999999999999999999887643 22
Q ss_pred HHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcC---CC--cEEecCeEEEeeCCCCChhhhhccccc-ccCcE
Q 018320 84 KIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLR---DG--NRLPTDMVVVGIGIRPNTSLFEGQLTL-EKGGI 157 (358)
Q Consensus 84 ~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~---~g--~~i~~D~vi~a~G~~p~~~l~~~~~~~-~~g~i 157 (358)
.+ ..+.+++.||++++++.+++++.+ +.+..+.+. +| +++++|.||+++|++|++++++..+.. ++|+|
T Consensus 195 ~~---~~~~~~~~gV~v~~~~~v~~i~~~--~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~~l~~~~~G~i 269 (335)
T 2a87_A 195 IM---LDRARNNDKIRFLTNHTVVAVDGD--TTVTGLRVRDTNTGAETTLPVTGVFVAIGHEPRSGLVREAIDVDPDGYV 269 (335)
T ss_dssp TH---HHHHHHCTTEEEECSEEEEEEECS--SSCCEEEEEEETTSCCEEECCSCEEECSCEEECCTTTBTTBCBCTTSCB
T ss_pred HH---HHHHhccCCcEEEeCceeEEEecC--CcEeEEEEEEcCCCceEEeecCEEEEccCCccChhHhhcccccCCCccE
Confidence 22 124456789999999999999853 222234333 44 579999999999999999988755665 57899
Q ss_pred EEecc-ccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcC
Q 018320 158 KVTGR-LQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIME 209 (358)
Q Consensus 158 ~vd~~-~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 209 (358)
.||++ ++|+.|+|||+|||+..+. ..+..|..||+.||.+|..
T Consensus 270 ~vd~~~~~t~~~~iya~GD~~~~~~---------~~~~~A~~~g~~aA~~i~~ 313 (335)
T 2a87_A 270 LVQGRTTSTSLPGVFAAGDLVDRTY---------RQAVTAAGSGCAAAIDAER 313 (335)
T ss_dssp CCSTTSSBCSSTTEEECGGGTCCSC---------CCHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCCccCCCCEEEeeecCCccH---------HHHHHHHHhHHHHHHHHHH
Confidence 99985 6899999999999998642 3577899999999998863
No 71
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.86 E-value=1.4e-21 Score=196.20 Aligned_cols=178 Identities=25% Similarity=0.378 Sum_probs=139.6
Q ss_pred CccCCCCCCC---CCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCH
Q 018320 7 LEEFGLSGSD---AENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTP 83 (358)
Q Consensus 7 P~~~~ipG~~---~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~ 83 (358)
|+.+++||.+ ..+++++...+. .. ..+++++|||||++|+|+|..|++.|.+||++++.+++.. +
T Consensus 326 ~~~~~ipG~~~~~~~~v~~~~~~~~------~~--~~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~---~- 393 (521)
T 1hyu_A 326 WRNMNVPGEDQYRTKGVTYCPHCDG------PL--FKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA---D- 393 (521)
T ss_dssp ECCCCCTTTTTTTTTTEECCTTCCG------GG--GBTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCS---C-
T ss_pred cCCCCCCChhhhcCceEEEeecCch------hh--cCCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCc---C-
Confidence 4455677764 245665433211 11 1579999999999999999999999999999999887653 3
Q ss_pred HHHHHHHHHHHh-CCCEEEcCCeeeEEEEcCCCcEEEEEcC---CCc--EEecCeEEEeeCCCCChhhhhccccc-ccCc
Q 018320 84 KIASYYEEYYKS-KGVKFVKGTVLSSFDVDSNGKVVAVNLR---DGN--RLPTDMVVVGIGIRPNTSLFEGQLTL-EKGG 156 (358)
Q Consensus 84 ~~~~~~~~~l~~-~gV~v~~~~~v~~i~~~~~g~v~~v~~~---~g~--~i~~D~vi~a~G~~p~~~l~~~~~~~-~~g~ 156 (358)
..+.+.|++ .||++++++.++++.. +++++..+.+. +|+ ++++|.|++++|++|+++++...+.+ ++|+
T Consensus 394 ---~~l~~~l~~~~gV~v~~~~~v~~i~~-~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~pn~~~l~~~l~~~~~G~ 469 (521)
T 1hyu_A 394 ---QVLQDKVRSLKNVDIILNAQTTEVKG-DGSKVVGLEYRDRVSGDIHSVALAGIFVQIGLLPNTHWLEGALERNRMGE 469 (521)
T ss_dssp ---HHHHHHHTTCTTEEEECSEEEEEEEE-CSSSEEEEEEEETTTCCEEEEECSEEEECCCEEESCGGGTTTSCBCTTSC
T ss_pred ---HHHHHHHhcCCCcEEEeCCEEEEEEc-CCCcEEEEEEEeCCCCceEEEEcCEEEECcCCCCCchHHhhhhccCCCCc
Confidence 345566776 6999999999999986 34555556554 353 68999999999999999988765655 5789
Q ss_pred EEEeccccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcC
Q 018320 157 IKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIME 209 (358)
Q Consensus 157 i~vd~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 209 (358)
|.||++++|+.|+|||+|||+..+. ..+..|+.||+.||.+|..
T Consensus 470 I~Vd~~~~ts~p~VfA~GD~~~~~~---------~~~~~A~~~g~~aa~~i~~ 513 (521)
T 1hyu_A 470 IIIDAKCETSVKGVFAAGDCTTVPY---------KQIIIATGEGAKASLSAFD 513 (521)
T ss_dssp BCCCTTCBCSSTTEEECSTTBCCSS---------CCHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCCCCCCEEEeecccCCCc---------ceeeehHHhHHHHHHHHHH
Confidence 9999999999999999999998653 3577899999999998863
No 72
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.86 E-value=1e-20 Score=185.90 Aligned_cols=203 Identities=17% Similarity=0.089 Sum_probs=150.2
Q ss_pred CCccCCCCCCCC--CCeEEecCHHHHHHHHHHHhcC-CCCcEEEEcCcHH----H--HHHH----HHHHhCCCc-----E
Q 018320 6 KLEEFGLSGSDA--ENVCYLRDLADANRLVNVMKSC-SGGNAVVIGGGYI----G--MECA----ASLVINKIN-----V 67 (358)
Q Consensus 6 ~P~~~~ipG~~~--~~v~~l~~~~da~~i~~~l~~~-~~~~vvVIGgG~~----g--le~A----~~L~~~g~~-----V 67 (358)
+|+.+++||.+. .+++.+.+++++.++.+.+... ++++++|||+|+. | +|+| ..|.+.|.+ |
T Consensus 111 ~~~~~~ipG~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~V 190 (437)
T 3sx6_A 111 KLAFENVPGSDPHEGPVQSICTVDHAERAFAEYQALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSF 190 (437)
T ss_dssp EECGGGSTTCSTTTSSEECCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCE
T ss_pred CcCcccCCCCCcccCcceecccccHHHHHHHHHHHHHhCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEE
Confidence 566667899865 4778889999998887765432 2456788998553 4 7777 666778875 9
Q ss_pred EEEeeCCcccCccC--CHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCC-----CcEEecCeEEEeeCCC
Q 018320 68 TMVFPEAHCMARLF--TPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRD-----GNRLPTDMVVVGIGIR 140 (358)
Q Consensus 68 tlv~~~~~~l~~~~--~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~-----g~~i~~D~vi~a~G~~ 140 (358)
|++++.+.+.+..+ .++....+++.|+++||++++++.|++++. ++........+ ++++++|.+++++|.+
T Consensus 191 tlv~~~~~~~~~~l~~~~~~~~~~~~~l~~~gI~~~~~~~v~~v~~--~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~ 268 (437)
T 3sx6_A 191 TFITSEPYIGHLGIQGVGDSKGILTKGLKEEGIEAYTNCKVTKVED--NKMYVTQVDEKGETIKEMVLPVKFGMMIPAFK 268 (437)
T ss_dssp EEEESSSSTTCTTTTCCTTHHHHHHHHHHHTTCEEECSEEEEEEET--TEEEEEEECTTSCEEEEEEEECSEEEEECCEE
T ss_pred EEEcCCccccccccCcchHHHHHHHHHHHHCCCEEEcCCEEEEEEC--CeEEEEecccCCccccceEEEEeEEEEcCCCc
Confidence 99999987733111 145788899999999999999999999973 32111112233 5679999999999999
Q ss_pred CChhhhhc-ccccccCcEEEeccccC-CCCcEEEEcccccccccccCccc---ccccHHHHHHHHHHHHHHHcCCC
Q 018320 141 PNTSLFEG-QLTLEKGGIKVTGRLQS-SNSSVYAVGDVAAFPLKLLGETR---RLEHVDSARKSAKHAVAAIMEPD 211 (358)
Q Consensus 141 p~~~l~~~-~~~~~~g~i~vd~~~~t-~~~~VyAiGD~~~~~~~~~g~~~---~~~~~~~A~~~g~~aa~~i~g~~ 211 (358)
|+..+.+. .+..++|+|.||+++|| +.|+|||+|||+..+... +.+. ...++..|..||+.+|+||....
T Consensus 269 ~~~~~~~~~gl~~~~G~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~-~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l 343 (437)
T 3sx6_A 269 GVPAVAGVEGLCNPGGFVLVDEHQRSKKYANIFAAGIAIAIPPVE-TTPVPTGAPKTGYMIESMVSAAVHNIKADL 343 (437)
T ss_dssp CCHHHHTSTTTBCTTSCBCBCTTSBBSSCTTEEECGGGBCCCCSC-CCSSCCCCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred CchhhhccccccCCCCcEEeChhccCCCCCCEEEEEEEeccCCcC-CCcCCCCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 98776653 35447889999999999 999999999999876421 2111 23478899999999999998543
No 73
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.86 E-value=8.3e-22 Score=195.00 Aligned_cols=192 Identities=14% Similarity=0.180 Sum_probs=138.6
Q ss_pred CccCCCCCCCCCCeEEecCHHHHHHH-HH--HHh-cCCCCcEEEEcCcHHHHHHHHHHH--------------------h
Q 018320 7 LEEFGLSGSDAENVCYLRDLADANRL-VN--VMK-SCSGGNAVVIGGGYIGMECAASLV--------------------I 62 (358)
Q Consensus 7 P~~~~ipG~~~~~v~~l~~~~da~~i-~~--~l~-~~~~~~vvVIGgG~~gle~A~~L~--------------------~ 62 (358)
|+.++|||.+.+++++.+++.....- .+ .+. ...+++++|||+|++|+|+|..|+ +
T Consensus 107 ~~~~~ipG~~~~gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~ 186 (460)
T 1cjc_A 107 HQALDIPGEELPGVFSARAFVGWYNGLPENRELAPDLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQ 186 (460)
T ss_dssp ECCCCCTTTTSTTEEEHHHHHHHHTTCGGGTTCCCCTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHT
T ss_pred CCCCCCCCCCCCcEEEHHHHHHHhhcCccccccccCCCCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhh
Confidence 35578999988899986654221100 00 001 124789999999999999999999 5
Q ss_pred CCC-cEEEEeeCCcc--------------cCc--------cCC----------HH---HHHHHHHHHHh-----------
Q 018320 63 NKI-NVTMVFPEAHC--------------MAR--------LFT----------PK---IASYYEEYYKS----------- 95 (358)
Q Consensus 63 ~g~-~Vtlv~~~~~~--------------l~~--------~~~----------~~---~~~~~~~~l~~----------- 95 (358)
.|. +|++++|.+.+ ++. .++ .. +.+.+.+.+++
T Consensus 187 ~g~~~V~lv~r~~~~~~~ft~~el~~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 266 (460)
T 1cjc_A 187 SRVKTVWIVGRRGPLQVAFTIKELREMIQLPGTRPMLDPADFLGLQDRIKEAARPRKRLMELLLRTATEKPGVEEAARRA 266 (460)
T ss_dssp CCCCEEEEECSSCGGGCCCCHHHHHHHHTCTTEEEECCGGGGTTHHHHTTTSCHHHHHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred CCCcEEEEEEcCChHhhccCHHHHHHhhcCCCceeEechhhhcchhhhhhhccHHHHHHHHHHHHHHHhccccccccCCC
Confidence 687 79999998765 221 011 10 23444455555
Q ss_pred ---CCCEEEcCCeeeEEEEcCCC-cEEEEEcC---------------CC--cEEecCeEEEeeCCCCChhhhhccc-cc-
Q 018320 96 ---KGVKFVKGTVLSSFDVDSNG-KVVAVNLR---------------DG--NRLPTDMVVVGIGIRPNTSLFEGQL-TL- 152 (358)
Q Consensus 96 ---~gV~v~~~~~v~~i~~~~~g-~v~~v~~~---------------~g--~~i~~D~vi~a~G~~p~~~l~~~~~-~~- 152 (358)
+||++++++.+++|..++++ ++..+++. +| ++++||+||+++|++|++ + .++ .+
T Consensus 267 ~~~~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~-l--~gl~~~d 343 (460)
T 1cjc_A 267 SASRAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRP-I--DPSVPFD 343 (460)
T ss_dssp TCSEEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEECCC-C--CTTSCCB
T ss_pred CCCceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCCCC-C--CCCcccc
Confidence 89999999999999864335 55555443 34 579999999999999998 3 345 55
Q ss_pred ccCcEEEeccccCC-CCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCC
Q 018320 153 EKGGIKVTGRLQSS-NSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEP 210 (358)
Q Consensus 153 ~~g~i~vd~~~~t~-~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~ 210 (358)
++++|.+|+++||+ .|+|||+|||+..+. ..+..|+.+|+.+|.+|++.
T Consensus 344 ~~g~i~vn~~~rt~~~p~vya~Gd~~~g~~---------~~i~~a~~~g~~aa~~i~~~ 393 (460)
T 1cjc_A 344 PKLGVVPNMEGRVVDVPGLYCSGWVKRGPT---------GVITTTMTDSFLTGQILLQD 393 (460)
T ss_dssp TTTTBCCEETTEETTCTTEEECTHHHHCTT---------CCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCeeECCCCcCcCCCCEEEEEeCCcCCC---------ccHHHHHHHHHHHHHHHHHH
Confidence 56889999999998 799999999997543 24667999999999998754
No 74
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.85 E-value=3.2e-21 Score=184.20 Aligned_cols=164 Identities=13% Similarity=0.180 Sum_probs=128.7
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCc------cCCHHHHHHHHHHHHhCC-CEEEcCCeeeEEEEc
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR------LFTPKIASYYEEYYKSKG-VKFVKGTVLSSFDVD 112 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~------~~~~~~~~~~~~~l~~~g-V~v~~~~~v~~i~~~ 112 (358)
++++++|||+|++|+|+|..|++.|.+||++++.+.+++. .+++...+.+.+.|++.| |++++++.|++++.+
T Consensus 165 ~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~~d~~~~~~~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~ 244 (369)
T 3d1c_A 165 NKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVKDIDFN 244 (369)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC----------CTTSCCHHHHHHHHHHHHTTCCEEEECSCCEEEEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCCCCCCccCCHHHHHHHHHHHhhCCcEEEecCcEEEEEEec
Confidence 5789999999999999999999999999999999887642 145777888999999997 999999999999753
Q ss_pred CCCcEEEEEcCCCcEEe-cCeEEEeeCCCCChhhhhc-ccccccCcEEEecc-ccCCCCcEEEEcccccccccccCcccc
Q 018320 113 SNGKVVAVNLRDGNRLP-TDMVVVGIGIRPNTSLFEG-QLTLEKGGIKVTGR-LQSSNSSVYAVGDVAAFPLKLLGETRR 189 (358)
Q Consensus 113 ~~g~v~~v~~~~g~~i~-~D~vi~a~G~~p~~~l~~~-~~~~~~g~i~vd~~-~~t~~~~VyAiGD~~~~~~~~~g~~~~ 189 (358)
+++ ..+++.+|+++. +|.+|+++|++|+++++.. .+..++|+|.||++ ++|+.|+|||+|||+..+....
T Consensus 245 ~~~--~~v~~~~g~~~~~~d~vi~a~G~~~~~~~~~~~~~~~~~g~i~v~~~~~~t~~~~v~a~GD~~~~~~~~~----- 317 (369)
T 3d1c_A 245 NGQ--YHISFDSGQSVHTPHEPILATGFDATKNPIVQQLFVTTNQDIKLTTHDESTRYPNIFMIGATVENDNAKL----- 317 (369)
T ss_dssp TTE--EEEEESSSCCEEESSCCEECCCBCGGGSHHHHHHSCCTTSCCCBCTTSBBSSSTTEEECSTTCCCSSCCC-----
T ss_pred CCc--eEEEecCCeEeccCCceEEeeccCCccchhhhhhccCCCCCEEechhhcccCCCCeEEeccccccCCeeE-----
Confidence 332 457788887775 6999999999999966554 34445677999975 7789999999999998765422
Q ss_pred cccHHHHHHHHHHHHHHHcCCC
Q 018320 190 LEHVDSARKSAKHAVAAIMEPD 211 (358)
Q Consensus 190 ~~~~~~A~~~g~~aa~~i~g~~ 211 (358)
+.+..+..||+.+|++|.+..
T Consensus 318 -~~~~~~~~~a~~~a~~l~~~~ 338 (369)
T 3d1c_A 318 -CYIYKFRARFAVLAHLLTQRE 338 (369)
T ss_dssp -CSHHHHGGGHHHHHHHHHHHT
T ss_pred -EEEehhhHHHHHHHHHHhccc
Confidence 345568889999999998754
No 75
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.85 E-value=7.3e-22 Score=184.54 Aligned_cols=175 Identities=10% Similarity=0.071 Sum_probs=130.4
Q ss_pred CCccCCCCCCC---CCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcH-HHHHHHHHHHhCCCcEEEEeeCCcccCccC
Q 018320 6 KLEEFGLSGSD---AENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGY-IGMECAASLVINKINVTMVFPEAHCMARLF 81 (358)
Q Consensus 6 ~P~~~~ipG~~---~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~-~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~ 81 (358)
+|+.+++||.+ ..++++.... .... .++++++|||||. +++|+|..+.+.+.+||++++.+.+
T Consensus 116 ~p~~p~i~G~~~~~~~~v~~~~~~------~~~~--~~~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~~----- 182 (304)
T 4fk1_A 116 QEEFPSIPNVREYYGKSLFSCPYC------DGWE--LKDQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNEL----- 182 (304)
T ss_dssp EEECCSCTTHHHHBTTTEESCHHH------HSGG--GTTSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCCC-----
T ss_pred ccccccccCccccccceeeecccc------chhH--hcCCceeeecCCCchhhhHHHHHHhCCceEEEEeccccc-----
Confidence 46667788854 2345533221 1111 1467788888775 5789999999999999999887653
Q ss_pred CHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChhhhhc-cccc-ccCcEEE
Q 018320 82 TPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEG-QLTL-EKGGIKV 159 (358)
Q Consensus 82 ~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~-~~~~-~~g~i~v 159 (358)
.+ .+.+.|+++|++++.++ ++.+.. +++.+..+++.+|+++++|.+++++|.+|++.++.. ++++ ++|+|.|
T Consensus 183 ~~----~~~~~l~~~g~~~~~~~-v~~~~~-~~~~~~~v~~~~g~~i~~~~~vi~~g~~~~~~~~~~~g~~~~~~G~I~v 256 (304)
T 4fk1_A 183 SQ----TIMDELSNKNIPVITES-IRTLQG-EGGYLKKVEFHSGLRIERAGGFIVPTFFRPNQFIEQLGCELQSNGTFVI 256 (304)
T ss_dssp CH----HHHHHHHTTTCCEECSC-EEEEES-GGGCCCEEEETTSCEECCCEEEECCEEECSSCHHHHTTCCCCTTSSSCS
T ss_pred hh----hhhhhhhccceeEeeee-EEEeec-CCCeeeeeeccccceeeecceeeeeccccCChhhhhcCeEECCCCCEEE
Confidence 22 34567888999999764 777764 455667789999999999999888877766665554 4776 6788999
Q ss_pred eccccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHc
Q 018320 160 TGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIM 208 (358)
Q Consensus 160 d~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~ 208 (358)
|++||||+|+|||+|||+..+. .++..|..||+.||..|.
T Consensus 257 d~~~~Ts~p~IyA~GDv~~~~~---------~~~~~A~~~G~~AA~~i~ 296 (304)
T 4fk1_A 257 DDFGRTSEKNIYLAGETTTQGP---------SSLIIAASQGNKAAIAIN 296 (304)
T ss_dssp STTCBCSSTTEEECSHHHHTSC---------CCHHHHHHHHHHHHHHHH
T ss_pred CcCCccCCCCEEEEeccCCCcc---------hHHHHHHHHHHHHHHHHH
Confidence 9999999999999999997542 346789999999998874
No 76
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.85 E-value=1.3e-20 Score=202.91 Aligned_cols=179 Identities=22% Similarity=0.315 Sum_probs=137.2
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCC-cEEEEeeCC-cccCccCCHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEE
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKI-NVTMVFPEA-HCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVV 118 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~-~Vtlv~~~~-~~l~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~ 118 (358)
+++|+|||||++|+|+|..+.++|. +||++++.+ ..++. +++++ +.+++.||++++++.++++.. +++++.
T Consensus 332 ~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~~~~-~~~e~-----~~~~~~Gv~~~~~~~~~~i~~-~~g~v~ 404 (1025)
T 1gte_A 332 RGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNIRA-VPEEV-----ELAKEEKCEFLPFLSPRKVIV-KGGRIV 404 (1025)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGGGCCS-CHHHH-----HHHHHTTCEEECSEEEEEEEE-ETTEEE
T ss_pred CCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecChhhCCC-CHHHH-----HHHHHcCCEEEeCCCceEEEc-cCCeEE
Confidence 6799999999999999999999997 899999988 45554 55554 356788999999999999976 356665
Q ss_pred EEEcC------CC---------cEEecCeEEEeeCCCC-Chhhhhc--cccc-ccCcEEEec-cccCCCCcEEEEccccc
Q 018320 119 AVNLR------DG---------NRLPTDMVVVGIGIRP-NTSLFEG--QLTL-EKGGIKVTG-RLQSSNSSVYAVGDVAA 178 (358)
Q Consensus 119 ~v~~~------~g---------~~i~~D~vi~a~G~~p-~~~l~~~--~~~~-~~g~i~vd~-~~~t~~~~VyAiGD~~~ 178 (358)
.+++. +| .++++|.||+|+|++| +..++.. ++.+ ++|+|.||+ +++|+.|+|||+|||+.
T Consensus 405 ~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l~~~~~gl~~~~~G~I~vd~~~~~Ts~~~VfA~GD~~~ 484 (1025)
T 1gte_A 405 AVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEALSPIKFNRWDLPEVDPETMQTSEPWVFAGGDIVG 484 (1025)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHTTTSCBCTTSSBCCCTTTCBCSSTTEEECSGGGC
T ss_pred EEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCCCchhhhhcccCceECCCCCEEECCCCCccCCCCEEEeCCCCC
Confidence 55442 22 3689999999999986 4666654 3666 578899997 89999999999999997
Q ss_pred ccccccCcccccccHHHHHHHHHHHHHHHcCC------CCCCCCCCCCeEEE--EecCceEEEeec
Q 018320 179 FPLKLLGETRRLEHVDSARKSAKHAVAAIMEP------DKTDKFDYLPFFYS--RVFTLSWQFYGD 236 (358)
Q Consensus 179 ~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~------~~~~~~~~~p~~~~--~~~~~~~~~~G~ 236 (358)
.+. ++..|+.||+.||.+|.+. .....++.+|++|. ...+++..+.|.
T Consensus 485 ~~~----------~~~~A~~~G~~aA~~i~~~L~~~~~~~~~~~~~~p~~~~ev~~v~ls~~~~G~ 540 (1025)
T 1gte_A 485 MAN----------TTVESVNDGKQASWYIHKYIQAQYGASVSAKPELPLFYTPVDLVDISVEMAGL 540 (1025)
T ss_dssp SCC----------CHHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCCBCCCCCGGGGCCCCEEETTE
T ss_pred Cch----------HHHHHHHHHHHHHHHHHHHHHhccCCCcccCcCccccccccccccceeeeccc
Confidence 542 5677999999999999741 11124567788776 445555555554
No 77
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.84 E-value=1.9e-21 Score=202.62 Aligned_cols=198 Identities=15% Similarity=0.139 Sum_probs=147.4
Q ss_pred CccCCCCCCC--CCCeEEecCHHHHHHHHHHHhcCCCCcEEEEc--CcHHHHHHHHHHHhCCCcEEEEeeCCcccCc-cC
Q 018320 7 LEEFGLSGSD--AENVCYLRDLADANRLVNVMKSCSGGNAVVIG--GGYIGMECAASLVINKINVTMVFPEAHCMAR-LF 81 (358)
Q Consensus 7 P~~~~ipG~~--~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIG--gG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~-~~ 81 (358)
|..+++||.+ .+++++. .++.+ . ....+++|+||| ||++|+|+|..|+++|.+||++++.+ +++. .+
T Consensus 499 p~~~~ipG~~~~~~~v~~~---~~~l~--~--~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~~~~ 570 (729)
T 1o94_A 499 LTHDPIPGADASLPDQLTP---EQVMD--G--KKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANYMHF 570 (729)
T ss_dssp TTSSCCTTCCTTSTTEECH---HHHHH--C--CSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHHHHH
T ss_pred ccCCCCCCccccCCCEEEH---HHHhc--C--CCCCCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-ccccccc
Confidence 5667799987 6788753 23221 1 122578999999 99999999999999999999999988 5542 12
Q ss_pred CHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCC-cE------------------EecCeEEEeeCCCCC
Q 018320 82 TPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDG-NR------------------LPTDMVVVGIGIRPN 142 (358)
Q Consensus 82 ~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g-~~------------------i~~D~vi~a~G~~p~ 142 (358)
+.. ...+.+.|+++||++++++.+++++. ++......+.++ ++ +++|.||+++|.+|+
T Consensus 571 ~~~-~~~~~~~l~~~GV~i~~~~~v~~i~~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~ 647 (729)
T 1o94_A 571 TLE-YPNMMRRLHELHVEELGDHFCSRIEP--GRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSE 647 (729)
T ss_dssp TTC-HHHHHHHHHHTTCEEECSEEEEEEET--TEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEEC
T ss_pred ccc-HHHHHHHHHhCCCEEEcCcEEEEEEC--CeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCC
Confidence 323 45677888999999999999999973 331111112333 33 999999999999999
Q ss_pred hhhhhcccccccCcEEEeccccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCCCCCCCCCCCCeE
Q 018320 143 TSLFEGQLTLEKGGIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPDKTDKFDYLPFF 222 (358)
Q Consensus 143 ~~l~~~~~~~~~g~i~vd~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~ 222 (358)
+++++... . .+|++++|+.|+|||+|||+.. ..+..|+.||+.||.+|.+.. .+..+|+
T Consensus 648 ~~l~~~l~-~-----~vd~~~~t~~~~VyAiGD~~~~-----------~~~~~A~~~G~~aA~~i~~~l---~~~~~p~- 706 (729)
T 1o94_A 648 CTLWNELK-A-----RESEWAENDIKGIYLIGDAEAP-----------RLIADATFTGHRVAREIEEAN---PQIAIPY- 706 (729)
T ss_dssp CHHHHHHH-H-----TGGGTGGGTCCEEEECGGGTSC-----------CCHHHHHHHHHHHHHTTTSSC---TTSCCCC-
T ss_pred hHHHHHHh-h-----hcccccccCCCCeEEEeCccch-----------hhHHHHHHHHHHHHHHhhhhc---ccCCCCe-
Confidence 98876321 1 2578999999999999999863 246789999999999998754 3456677
Q ss_pred EEEecCceEEEeec
Q 018320 223 YSRVFTLSWQFYGD 236 (358)
Q Consensus 223 ~~~~~~~~~~~~G~ 236 (358)
+...+++.++++|-
T Consensus 707 ~~~~~~~~~~~~~~ 720 (729)
T 1o94_A 707 KRETIAWGTPHMPG 720 (729)
T ss_dssp CCCCCCTTCCSSTT
T ss_pred eeecccCcccccCC
Confidence 67888887776653
No 78
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.84 E-value=4.8e-21 Score=185.73 Aligned_cols=195 Identities=18% Similarity=0.129 Sum_probs=148.9
Q ss_pred CCccCCCCCCC----CCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcH-----------HHHHHHHHHHhCC--CcEE
Q 018320 6 KLEEFGLSGSD----AENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGY-----------IGMECAASLVINK--INVT 68 (358)
Q Consensus 6 ~P~~~~ipG~~----~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~-----------~gle~A~~L~~~g--~~Vt 68 (358)
+|+.+++||.+ ...++++++.+++..+++.+........+|+++|. +++++|..|++.+ .+|+
T Consensus 107 ~~~~~~i~G~~e~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~~~~~~~~v~ 186 (401)
T 3vrd_B 107 DLLYDKIEGYSEALAAKLPHAWKAGEQTALLRRQLESMDDGGVVIIAPPAPPFRCPPGPYERASQIAHYLKAHKSKSKVI 186 (401)
T ss_dssp EECGGGSBTCCSGGGGTSCCCSSCSHHHHHHHHHHHHSCTTCEEEEECCSSSCBCTTHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred ccccCCccCchhhcccCccceeccHHHHHHHHHHHHhcccCCcEEEecCCccEEeehHHHHHHHHHHHHHHhcCCCCEEE
Confidence 45566778754 24667888999999999988766555555554332 4567777777665 6899
Q ss_pred EEeeCCcccC-ccCCHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChhhhh
Q 018320 69 MVFPEAHCMA-RLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFE 147 (358)
Q Consensus 69 lv~~~~~~l~-~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~ 147 (358)
+++..+.+.. ..+++.+.+.+.+.+++.||+++++++++.++.+.++ ..+++.+|+++++|++++++|.+|+..+..
T Consensus 187 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~v~~v~~~~~~--~~v~~~~g~~i~~D~vi~~~g~~~~~~~~~ 264 (401)
T 3vrd_B 187 ILDNSQTFSKQAQFTKGWERLYGFGTENALIEWHPGPDAAVVKTDTEA--MTVETSFGETFKAAVINLIPPQRAGKIAQS 264 (401)
T ss_dssp EECSSSSCTTHHHHHHHHHHHSCTTSTTCSEEEECTTTTCEEEEETTT--TEEEETTSCEEECSEEEECCCEEECHHHHH
T ss_pred EEcccccccccccccHHHHHHHHHHHHhcCcEEEeCceEEEEEecccc--eEEEcCCCcEEEeeEEEEecCcCCchhHhh
Confidence 9998877632 2256777777777888999999999999999865444 357889999999999999999999865544
Q ss_pred cccccccCcEEEecc-cc-CCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcC
Q 018320 148 GQLTLEKGGIKVTGR-LQ-SSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIME 209 (358)
Q Consensus 148 ~~~~~~~g~i~vd~~-~~-t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 209 (358)
..+..++|+|.||++ || |++|+|||+|||+.... ...++..|.+||+++|+||+.
T Consensus 265 ~gl~~~~G~i~VD~~tl~~t~~p~VfAiGDva~~~~-------~pk~a~~A~~qa~v~A~ni~~ 321 (401)
T 3vrd_B 265 ASLTNDSGWCPVDIRTFESSLQPGIHVIGDACNAAP-------MPKSAYSANSQAKVAAAAVVA 321 (401)
T ss_dssp TTCCCTTSSBCBCTTTCBBSSSTTEEECGGGBCCTT-------SCBSHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCEEECCCcceecCCCCEEEecccccCCC-------CCchHHHHHHHHHHHHHHHHH
Confidence 556668899999987 55 79999999999986421 125678899999999999974
No 79
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.84 E-value=6.7e-21 Score=203.88 Aligned_cols=177 Identities=16% Similarity=0.192 Sum_probs=141.0
Q ss_pred CCccCCCCCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHH
Q 018320 6 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 85 (358)
Q Consensus 6 ~P~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~ 85 (358)
+|+.+++||.+.++|++.+++.+.. +.....++++++|||+|++|+|+|..|++.|.+||++++.+.+++ .
T Consensus 252 ~p~~~~ipG~~~~gv~~~~~~~~~l---~~~~~~~gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~~-----~- 322 (965)
T 2gag_A 252 HERPIVFENNDRPGIMLAGAVRSYL---NRYGVRAGARIAVATTNDSAYELVRELAATGGVVAVIDARSSISA-----A- 322 (965)
T ss_dssp EECCCCCBTCCSTTEEEHHHHHHHH---HTTCEESCSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCCH-----H-
T ss_pred ccCCCCCCCCCCCCEEEhHHHHHHH---HhcCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccch-----h-
Confidence 3566779999999999765554321 111222568999999999999999999999999999999887543 1
Q ss_pred HHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCC-------C--cEEecCeEEEeeCCCCChhhhhcccccccCc
Q 018320 86 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRD-------G--NRLPTDMVVVGIGIRPNTSLFEGQLTLEKGG 156 (358)
Q Consensus 86 ~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~-------g--~~i~~D~vi~a~G~~p~~~l~~~~~~~~~g~ 156 (358)
.+.+++.||++++++.+++++.++++.+..+++.+ | +++++|.|++++|++|+++++.. .+++
T Consensus 323 ----~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l~~~----~~g~ 394 (965)
T 2gag_A 323 ----AAQAVADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFNPVVHLHSQ----RQGK 394 (965)
T ss_dssp ----HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEECCHHHHH----TTCC
T ss_pred ----HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcCcChHHHHh----CCCc
Confidence 45688999999999999999863245555666654 4 67999999999999999988753 2578
Q ss_pred EEEecccc-----CCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCC
Q 018320 157 IKVTGRLQ-----SSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEP 210 (358)
Q Consensus 157 i~vd~~~~-----t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~ 210 (358)
|.+|++++ |+.|+|||+|||+..+. ...|..||+.||.+|++.
T Consensus 395 i~vd~~~~~~v~~ts~p~IyAaGD~a~~~~-----------l~~A~~~G~~aA~~i~~~ 442 (965)
T 2gag_A 395 LDWDTTIHAFVPADAVANQHLAGAMTGRLD-----------TASALSTGAATGAAAATA 442 (965)
T ss_dssp EEEETTTTEEEECSCCTTEEECGGGGTCCS-----------HHHHHHHHHHHHHHHHHH
T ss_pred EEEcCcccccccCCCCCCEEEEEecCCchh-----------HHHHHHHHHHHHHHHHHH
Confidence 99999887 89999999999997642 347999999999999753
No 80
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.83 E-value=8.5e-22 Score=193.26 Aligned_cols=196 Identities=14% Similarity=0.131 Sum_probs=141.2
Q ss_pred CCCCCCCCCCeEEecCHHHHHHHHHHHhcC-CCCcEEEEcCcH------HHHHH----HHHHHhCC----CcEEEEeeCC
Q 018320 10 FGLSGSDAENVCYLRDLADANRLVNVMKSC-SGGNAVVIGGGY------IGMEC----AASLVINK----INVTMVFPEA 74 (358)
Q Consensus 10 ~~ipG~~~~~v~~l~~~~da~~i~~~l~~~-~~~~vvVIGgG~------~gle~----A~~L~~~g----~~Vtlv~~~~ 74 (358)
+++||.+ ++++++++++|+.++++.+.+. ..+.++|+|++. .+.|+ +..|.++| .+|++++..+
T Consensus 111 ~~i~G~~-e~~~~~~~~~~a~~~~~~l~~~~~~~~~vv~gg~~gve~~~~~~e~a~~~~~~l~~~g~~~~v~v~~~~~~~ 189 (430)
T 3hyw_A 111 FGAEGQE-ENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEP 189 (430)
T ss_dssp CCSBTHH-HHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSS
T ss_pred CCccCcc-cCcCCcccHHHHHHHHHHHHhhccCCceEEEeCCCcEEEhHHHHHHHHHHHHHHHHhcccccceeeeecccc
Confidence 5688875 5788899999999998877543 234556666542 22333 34455555 4789998877
Q ss_pred cccC--ccCCHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCC--cEEecCeEEEeeCCCCChhhhhccc
Q 018320 75 HCMA--RLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDG--NRLPTDMVVVGIGIRPNTSLFEGQL 150 (358)
Q Consensus 75 ~~l~--~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g--~~i~~D~vi~a~G~~p~~~l~~~~~ 150 (358)
.+.+ ...++...+.+++.|+++||++++++.|++++. + .+ .++..+| +++++|++++++|.+|+..+.....
T Consensus 190 ~l~~~~~~~~~~~~~~l~~~l~~~GV~~~~~~~v~~v~~--~-~~-~~~~~~g~~~~i~~d~vi~~~G~~~~~~~~~~~~ 265 (430)
T 3hyw_A 190 YLGHFGVGGIGASKRLVEDLFAERNIDWIANVAVKAIEP--D-KV-IYEDLNGNTHEVPAKFTMFMPSFQGPEVVASAGD 265 (430)
T ss_dssp STTCTTTTCSTTHHHHHHHHHHHTTCEEECSCEEEEECS--S-EE-EEECTTSCEEEEECSEEEEECEEECCHHHHTTCT
T ss_pred hhhhccchhhHHHHHHHHHHHHhCCeEEEeCceEEEEeC--C-ce-EEEeeCCCceEeecceEEEeccCCCchHHHhccc
Confidence 5432 224567788899999999999999999999963 2 22 3444444 5799999999999999866555443
Q ss_pred --cc-ccCcEEEecccc-CCCCcEEEEcccccccccccCccc---ccccHHHHHHHHHHHHHHHcCCC
Q 018320 151 --TL-EKGGIKVTGRLQ-SSNSSVYAVGDVAAFPLKLLGETR---RLEHVDSARKSAKHAVAAIMEPD 211 (358)
Q Consensus 151 --~~-~~g~i~vd~~~~-t~~~~VyAiGD~~~~~~~~~g~~~---~~~~~~~A~~~g~~aa~~i~g~~ 211 (358)
.. .++.|.||++|| |++|+|||+|||+..+... +.+. ...+++.|.+||+.+|+||+...
T Consensus 266 ~l~~~~~g~i~vd~~lq~t~~~~IfAiGD~a~~p~~~-~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l 332 (430)
T 3hyw_A 266 KVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIE-KTPIPTGVPKTGMMIEQMAMAVAHNIVNDI 332 (430)
T ss_dssp TTBCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSS-CCSSCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCceEEEecccccCCCCCCEEEeccEEecCCcc-cCcCcCccchHHHHHHHHHHHHHHHHHHHh
Confidence 33 456799999999 7999999999999876432 1111 23567899999999999998543
No 81
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.83 E-value=8.8e-21 Score=187.42 Aligned_cols=189 Identities=22% Similarity=0.273 Sum_probs=135.6
Q ss_pred CccCCCCCCCCCCeEEecCHHHHHH-HH---HHHhcCCCCcEEEEcCcHHHHHHHHHHHhC-------------------
Q 018320 7 LEEFGLSGSDAENVCYLRDLADANR-LV---NVMKSCSGGNAVVIGGGYIGMECAASLVIN------------------- 63 (358)
Q Consensus 7 P~~~~ipG~~~~~v~~l~~~~da~~-i~---~~l~~~~~~~vvVIGgG~~gle~A~~L~~~------------------- 63 (358)
|+.+++||.+.+++++.+++..... .. ..+....+++++|||+|++|+|+|..|++.
T Consensus 109 ~~~~~ipG~~~~gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~ 188 (456)
T 1lqt_A 109 DRMLNIPGEDLPGSIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRP 188 (456)
T ss_dssp ECCCCCTTTTSTTEEEHHHHHHHHTTCGGGTTCCCCCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTT
T ss_pred CCCCCCCCCCCCCcEEHHHHHhhhhcCcccccchhhcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHH
Confidence 5667899998889987654421100 00 011112578999999999999999999974
Q ss_pred -C-CcEEEEeeCCcccCccCCH-------------------HH------------------HHHHHHHHHh------CCC
Q 018320 64 -K-INVTMVFPEAHCMARLFTP-------------------KI------------------ASYYEEYYKS------KGV 98 (358)
Q Consensus 64 -g-~~Vtlv~~~~~~l~~~~~~-------------------~~------------------~~~~~~~l~~------~gV 98 (358)
| .+|++++|.+.+... |++ ++ .+.+.+.+++ +||
T Consensus 189 ~g~~~V~lv~r~~~~~~~-f~~~elrel~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv 267 (456)
T 1lqt_A 189 RGIQEVVIVGRRGPLQAA-FTTLELRELADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRM 267 (456)
T ss_dssp CCCCEEEEECSSCGGGCC-CCHHHHHHGGGCTTEEEECCGGGGTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEE
T ss_pred CCCcEEEEEecCChhhhc-cChHHHHHhhcCCCceeeeChHHhccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceE
Confidence 5 499999998876543 221 11 2344455555 799
Q ss_pred EEEcCCeeeEEEEcCCCcEEEEEcC----------------CC--cEEecCeEEEeeCCCCChhhhhccccc-ccCcEEE
Q 018320 99 KFVKGTVLSSFDVDSNGKVVAVNLR----------------DG--NRLPTDMVVVGIGIRPNTSLFEGQLTL-EKGGIKV 159 (358)
Q Consensus 99 ~v~~~~~v~~i~~~~~g~v~~v~~~----------------~g--~~i~~D~vi~a~G~~p~~~l~~~~~~~-~~g~i~v 159 (358)
++++++.+++|..+ +.+..+++. +| ++++||+|++++|++|++ + ..+.+ ++++|.+
T Consensus 268 ~i~~~~~~~~i~~~--~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~~-l--~gl~~d~~g~i~v 342 (456)
T 1lqt_A 268 VFRFLTSPIEIKGK--RKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVP-T--PGLPFDDQSGTIP 342 (456)
T ss_dssp EEECSEEEEEEECS--SSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEECCC-C--TTSCCBTTTTBCC
T ss_pred EEEeCCCCeEEecC--CcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEccccccCC-C--CCCcccCCCCeeE
Confidence 99999999999853 433334332 34 469999999999999998 3 23555 5688999
Q ss_pred ecccc-CCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCC
Q 018320 160 TGRLQ-SSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEP 210 (358)
Q Consensus 160 d~~~~-t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~ 210 (358)
|++++ |+.|+|||+|||+..+.. .+..|+.||+.+|.+|++.
T Consensus 343 n~~~rvt~~pgvya~GD~~~gp~~---------~i~~a~~~g~~~a~~i~~~ 385 (456)
T 1lqt_A 343 NVGGRINGSPNEYVVGWIKRGPTG---------VIGTNKKDAQDTVDTLIKN 385 (456)
T ss_dssp EETTEETTCSSEEECTHHHHCSCS---------CTTHHHHHHHHHHHHHHHH
T ss_pred CCCCcCCCCCCEEEEeccCCCCch---------hHHHHHHHHHHHHHHHHHH
Confidence 99999 899999999999975432 3446889999999998753
No 82
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.82 E-value=1.7e-20 Score=177.43 Aligned_cols=155 Identities=22% Similarity=0.300 Sum_probs=115.7
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeC-CcccCccC-CHHHHHHHHHHHH-----------------------
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPE-AHCMARLF-TPKIASYYEEYYK----------------------- 94 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~-~~~l~~~~-~~~~~~~~~~~l~----------------------- 94 (358)
++++++|||+|++|+|+|..|++.| +||++.+. +.+++..+ +.++.+.+.+.+.
T Consensus 162 ~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (357)
T 4a9w_A 162 AGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHEPAFLADDVDGRVLFERATERWKAQQEGREPDLPPGGFGDIVMVPP 240 (357)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSCCCBCCTTCCTHHHHTC----------------------CBCCCHH
T ss_pred CCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCCCeecchhhcCccHHHHHHHHHhccccccCCCcccccccCcccChh
Confidence 5799999999999999999999998 69999987 56655432 2344333333332
Q ss_pred -----hCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChhhhhcc-cccccCcEEEecc--ccCC
Q 018320 95 -----SKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQ-LTLEKGGIKVTGR--LQSS 166 (358)
Q Consensus 95 -----~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~-~~~~~g~i~vd~~--~~t~ 166 (358)
+.|+ +.....+++++. + .+.+.+|+++++|.||+++|++|++++++.. +..++|+|.||++ ++|+
T Consensus 241 ~~~~~~~g~-i~~~~~v~~~~~--~----~v~~~~g~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~G~i~vd~~~l~~t~ 313 (357)
T 4a9w_A 241 VLDARARGV-LAAVPPPARFSP--T----GMQWADGTERAFDAVIWCTGFRPALSHLKGLDLVTPQGQVEVDGSGLRALA 313 (357)
T ss_dssp HHHHHHTTC-CCEECCCSEEET--T----EEECTTSCEEECSEEEECCCBCCCCGGGTTTTCBCTTSCBCBCTTSCBBSS
T ss_pred HHHHHhcCc-eEEecCcceEeC--C----eeEECCCCEecCCEEEECCCcCCCCcccCcccccCCCCCccccCCcccCCC
Confidence 3444 445566777753 2 4788999999999999999999999988764 5557789999999 9999
Q ss_pred CCcEEEEc--ccccccccccCcccccccHHHHHHHHHHHHHHHcCCC
Q 018320 167 NSSVYAVG--DVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPD 211 (358)
Q Consensus 167 ~~~VyAiG--D~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~ 211 (358)
.|+|||+| ||+.... ..+..|..||+.+|.+|....
T Consensus 314 ~~~vya~Gd~d~~~~~~---------~~~~~A~~~g~~~a~~i~~~l 351 (357)
T 4a9w_A 314 VPSVWLLGYGDWNGMAS---------ATLIGVTRYAREAVRQVTAYC 351 (357)
T ss_dssp CTTEEECSSCGGGSTTC---------SSTTTHHHHHHHHHHHHHHHT
T ss_pred CCCeEEeccccccccch---------hhhhhhHHHHHHHHHHHHHHH
Confidence 99999999 5554221 234458899999999987543
No 83
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.79 E-value=2.2e-19 Score=186.10 Aligned_cols=174 Identities=19% Similarity=0.141 Sum_probs=135.2
Q ss_pred CccCCCCCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEc--CcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHH
Q 018320 7 LEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIG--GGYIGMECAASLVINKINVTMVFPEAHCMARLFTPK 84 (358)
Q Consensus 7 P~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIG--gG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~ 84 (358)
|..+++||.+.+++++. .+... . ....+++++||| +|++|+|+|..|.+.|.+||++++.+.+++...++.
T Consensus 496 ~~~~~i~G~~~~~v~~~---~~~l~---~-~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~~~~ 568 (690)
T 3k30_A 496 FHTTALPIAEGMQVLGP---DDLFA---G-RLPDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTNNTF 568 (690)
T ss_dssp SCSSCCCBCTTSEEECH---HHHHT---T-CCCSSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGGGGT
T ss_pred cCCCCCCCCCCCcEEcH---HHHhC---C-CCCCCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccccccch
Confidence 55667899887777643 22221 1 222568899999 999999999999999999999999998877644466
Q ss_pred HHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEE---cCCCcEEecCeEEEeeCCCCChhhhhcccccccCcEEEec
Q 018320 85 IASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVN---LRDGNRLPTDMVVVGIGIRPNTSLFEGQLTLEKGGIKVTG 161 (358)
Q Consensus 85 ~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~---~~~g~~i~~D~vi~a~G~~p~~~l~~~~~~~~~g~i~vd~ 161 (358)
....+.+.|++.||+++++++|++++. ++. .+. ..+++++++|.||+|+|++|+++++..... .+.
T Consensus 569 ~~~~l~~~l~~~GV~i~~~~~V~~i~~--~~~--~v~~~~~~~~~~i~aD~VV~A~G~~p~~~l~~~l~~--~~~----- 637 (690)
T 3k30_A 569 EVNRIQRRLIENGVARVTDHAVVAVGA--GGV--TVRDTYASIERELECDAVVMVTARLPREELYLDLVA--RRD----- 637 (690)
T ss_dssp CHHHHHHHHHHTTCEEEESEEEEEEET--TEE--EEEETTTCCEEEEECSEEEEESCEEECCHHHHHHHH--HHH-----
T ss_pred hHHHHHHHHHHCCCEEEcCcEEEEEEC--CeE--EEEEccCCeEEEEECCEEEECCCCCCChHHHHHHhh--hhc-----
Confidence 678888999999999999999999974 331 222 235568999999999999999998764211 111
Q ss_pred cccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCCC
Q 018320 162 RLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPD 211 (358)
Q Consensus 162 ~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~ 211 (358)
+|+.|+||++|||+... .+..|+.||+.||.+|.+..
T Consensus 638 --~t~~~~VyaiGD~~~~~-----------~~~~A~~~g~~aa~~i~~~l 674 (690)
T 3k30_A 638 --AGEIASVRGIGDAWAPG-----------TIAAAVWSGRRAAEEFDAVL 674 (690)
T ss_dssp --HTSCSEEEECGGGTSCB-----------CHHHHHHHHHHHHHHTTCCC
T ss_pred --ccCCCCEEEEeCCCchh-----------hHHHHHHHHHHHHHHHHhhc
Confidence 78999999999999753 45679999999999998864
No 84
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.79 E-value=4e-19 Score=174.06 Aligned_cols=185 Identities=12% Similarity=0.086 Sum_probs=136.6
Q ss_pred eEEecCHHHHHHHHHHHhcC-CCCcEEEEcCcHHH------HHHH----HHHHhCC----CcEEEEeeCCcccCcc--CC
Q 018320 20 VCYLRDLADANRLVNVMKSC-SGGNAVVIGGGYIG------MECA----ASLVINK----INVTMVFPEAHCMARL--FT 82 (358)
Q Consensus 20 v~~l~~~~da~~i~~~l~~~-~~~~vvVIGgG~~g------le~A----~~L~~~g----~~Vtlv~~~~~~l~~~--~~ 82 (358)
.+.+.+.+++.++.+.++.. ++++++|||+|+.+ +|+| ..|.++| .+|+++++.+.+.... -.
T Consensus 120 ~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~~~~~~~l~~~ 199 (430)
T 3h28_A 120 STSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGI 199 (430)
T ss_dssp SCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCS
T ss_pred ccCcCCHHHHHHHHHHHHHHHhcCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCccceEEEEecCCccccccccCcc
Confidence 34567888888777655422 24567888987543 7777 5556677 4899999988763211 12
Q ss_pred HHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCC----CcEEecCeEEEeeCCCCChhhhhc--ccccccC-
Q 018320 83 PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRD----GNRLPTDMVVVGIGIRPNTSLFEG--QLTLEKG- 155 (358)
Q Consensus 83 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~----g~~i~~D~vi~a~G~~p~~~l~~~--~~~~~~g- 155 (358)
++..+.+.+.|+++||++++++.|++++. ++ +.+.+ ++++++|.+++++|++|+..+... .+..++|
T Consensus 200 ~~~~~~l~~~l~~~GV~i~~~~~v~~v~~--~~----v~~~~~~~~g~~i~~D~vv~a~G~~~~~~l~~~~~gl~~~~G~ 273 (430)
T 3h28_A 200 GASKRLVEDLFAERNIDWIANVAVKAIEP--DK----VIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASAGDKVANPANK 273 (430)
T ss_dssp TTHHHHHHHHHHHTTCEEECSCEEEEECS--SE----EEEECTTSCEEEEECSEEEEECEEECCHHHHTTCTTTBCTTTC
T ss_pred hHHHHHHHHHHHHCCCEEEeCCEEEEEeC--Ce----EEEEecCCCceEEeeeEEEECCCCccchhHhhccccCcCCCCC
Confidence 35788889999999999999999999963 22 33334 678999999999999998766553 3544678
Q ss_pred cEEEeccccC-CCCcEEEEcccccccccccCccc---ccccHHHHHHHHHHHHHHHcCCC
Q 018320 156 GIKVTGRLQS-SNSSVYAVGDVAAFPLKLLGETR---RLEHVDSARKSAKHAVAAIMEPD 211 (358)
Q Consensus 156 ~i~vd~~~~t-~~~~VyAiGD~~~~~~~~~g~~~---~~~~~~~A~~~g~~aa~~i~g~~ 211 (358)
+|.||+++|| +.|+|||+|||+..+.. .+.+. ...++..|..||+.+|+||....
T Consensus 274 ~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~-~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l 332 (430)
T 3h28_A 274 MVIVNRCFQNPTYKNIFGVGVVTAIPPI-EKTPIPTGVPKTGMMIEQMAMAVAHNIVNDI 332 (430)
T ss_dssp CBCCCTTSBCSSSTTEEECSTTBCCCCS-SCCSSCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCccccCCCCCCEEEEEeeeccCCc-cCCCCCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence 8999999999 99999999999987642 12211 13568899999999999998643
No 85
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.77 E-value=1.2e-18 Score=172.54 Aligned_cols=170 Identities=12% Similarity=0.079 Sum_probs=127.8
Q ss_pred CCCCCCccCCCCCCCC-CC-eEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCc
Q 018320 2 NMALKLEEFGLSGSDA-EN-VCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR 79 (358)
Q Consensus 2 ~~~~~P~~~~ipG~~~-~~-v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~ 79 (358)
|...+|+.+++||.+. ++ +++..++.+.. ...+|+|+|||+|++|+|+|..|++.|.+||++++.+.+++.
T Consensus 163 G~~s~p~~p~ipG~~~~~g~~~hs~~~~~~~-------~~~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~~~~ 235 (464)
T 2xve_A 163 GHFSTPYVPEFEGFEKFGGRILHAHDFRDAL-------EFKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPMGY 235 (464)
T ss_dssp CSSSSBCCCCCBTTTTCCSEEEEGGGCCCGG-------GGTTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCCCCC
T ss_pred CCCCCCccCCCCCcccCCceEEehhhhCCHh-------HcCCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCCCCC
Confidence 4335666667888753 33 44433332221 125899999999999999999999999999999999887764
Q ss_pred cCCHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChhhhhcc--cccccC-c
Q 018320 80 LFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQ--LTLEKG-G 156 (358)
Q Consensus 80 ~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~--~~~~~g-~ 156 (358)
.+ ..||+++ ..|++++. + .+.+.||+++++|.||+|+|++|+++++... +..+++ .
T Consensus 236 ~~-------------~~~V~~~--~~V~~i~~--~----~V~~~dG~~i~~D~Vi~atG~~p~~~~l~~~~gl~~~~~~~ 294 (464)
T 2xve_A 236 KW-------------PENWDER--PNLVRVDT--E----NAYFADGSSEKVDAIILCTGYIHHFPFLNDDLRLVTNNRLW 294 (464)
T ss_dssp CC-------------CTTEEEC--SCEEEECS--S----EEEETTSCEEECSEEEECCCBCCCCTTBCTTTCCCCCSSSC
T ss_pred CC-------------CCceEEc--CCeEEEeC--C----EEEECCCCEEeCCEEEECCCCCCCCCCcCcccccccCCCcc
Confidence 32 2478887 67888852 2 4778899999999999999999999987652 444444 4
Q ss_pred EEEec---cccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCCC
Q 018320 157 IKVTG---RLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPD 211 (358)
Q Consensus 157 i~vd~---~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~ 211 (358)
+ ++. .++|+.|+||++|||... ..+..|..||+.++.+|.|..
T Consensus 295 v-~~~~~~~~~t~~p~i~aiGd~~~~-----------~~~~~a~~qa~~~a~~l~G~~ 340 (464)
T 2xve_A 295 P-LNLYKGVVWEDNPKFFYIGMQDQW-----------YSFNMFDAQAWYARDVIMGRL 340 (464)
T ss_dssp C-SSEETTTEESSSTTEEECSCSCCS-----------SCHHHHHHHHHHHHHHHTTSS
T ss_pred c-ccccceEecCCCCCEEEEeCcccc-----------cchHHHHHHHHHHHHHHcCCC
Confidence 4 333 367899999999998763 246678999999999998864
No 86
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.74 E-value=3.8e-18 Score=176.31 Aligned_cols=167 Identities=23% Similarity=0.250 Sum_probs=129.1
Q ss_pred CCccCCCCCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCC--------------------
Q 018320 6 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKI-------------------- 65 (358)
Q Consensus 6 ~P~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~-------------------- 65 (358)
+|+.+++||.+.+++++.. +. +.. ....+++|+|||||++|+|+|..|++.|.
T Consensus 466 ~p~~~~i~G~~~~~v~~~~---~~--l~~--~~~~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~ 538 (671)
T 1ps9_A 466 VPRTPPIDGIDHPKVLSYL---DV--LRD--KAPVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQ 538 (671)
T ss_dssp EECCCCCBTTTSTTEEEHH---HH--HTS--CCCCCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCC
T ss_pred CcCCCCCCCCCCCcEeeHH---HH--hhC--CCCCCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhccccccc
Confidence 4666778998777888642 21 111 12257999999999999999999998873
Q ss_pred -----------------cEEEEeeCCcccCccCCHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCC--c
Q 018320 66 -----------------NVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDG--N 126 (358)
Q Consensus 66 -----------------~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g--~ 126 (358)
+|+++++.+..+...+++.....+.+.|+++||++++++++++++. ++ + .++ .+| +
T Consensus 539 ~~~~~~~~~~~~~~~~~~v~l~~~~~~~l~~~l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~--~~-v-~~~-~~G~~~ 613 (671)
T 1ps9_A 539 QAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDD--DG-L-HVV-INGETQ 613 (671)
T ss_dssp SGGGBCTTCCCCCCCSSEEEEECSSCSCTTTTSCTTTHHHHHHHHHHTTCEEECSCEEEEEET--TE-E-EEE-ETTEEE
T ss_pred ccccccccccccCCCCcEEEEEEecchhhccccccccHHHHHHHHHhcCCEEEeCcEEEEEeC--Ce-E-EEe-cCCeEE
Confidence 5677877776666557888888888999999999999999999973 33 2 232 567 6
Q ss_pred EEecCeEEEeeCCCCChhhhhcccccccCcEEEeccccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHH
Q 018320 127 RLPTDMVVVGIGIRPNTSLFEGQLTLEKGGIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAA 206 (358)
Q Consensus 127 ~i~~D~vi~a~G~~p~~~l~~~~~~~~~g~i~vd~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~ 206 (358)
++++|.||+++|++|++++++. ++...++||++|||+.... ..+..|++||+.+|.+
T Consensus 614 ~i~~D~Vi~a~G~~p~~~l~~~--------------l~~~g~~v~aiGD~~~~~~---------~~~~~A~~~g~~aA~~ 670 (671)
T 1ps9_A 614 VLAVDNVVICAGQEPNRALAQP--------------LIDSGKTVHLIGGCDVAME---------LDARRAIAQGTRLALE 670 (671)
T ss_dssp EECCSEEEECCCEEECCTTHHH--------------HHTTTCCEEECGGGTCCSS---------CCHHHHHHHHHHHHHH
T ss_pred EEeCCEEEECCCccccHHHHHH--------------HHhcCCCEEEECCcCccCc---------hhHHHHHHHHHHHHHh
Confidence 7999999999999999988753 2233478999999988643 2478899999999988
Q ss_pred H
Q 018320 207 I 207 (358)
Q Consensus 207 i 207 (358)
|
T Consensus 671 i 671 (671)
T 1ps9_A 671 I 671 (671)
T ss_dssp C
T ss_pred C
Confidence 5
No 87
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.74 E-value=7e-18 Score=168.23 Aligned_cols=154 Identities=16% Similarity=0.111 Sum_probs=122.4
Q ss_pred CCccCCCCCCCCCCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHH
Q 018320 6 KLEEFGLSGSDAENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI 85 (358)
Q Consensus 6 ~P~~~~ipG~~~~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~ 85 (358)
.|..+++||.+.+++++.. ++..+.+.....++++++|||+|++|+|
T Consensus 218 ~~~~~~~~g~~~~gv~~~~---~~~~~~~~~~~~~~~~vvViGgG~~gle------------------------------ 264 (493)
T 1y56_A 218 IDSTMLFENNDMPGVFRRD---FALEVMNVWEVAPGRKVAVTGSKADEVI------------------------------ 264 (493)
T ss_dssp EECCCCCTTTTSTTEEEHH---HHHHHHHTSCBCSCSEEEEESTTHHHHH------------------------------
T ss_pred CccCCCCCCCCCCCEEEcH---HHHHHHHhcccCCCCEEEEECCCHHHHH------------------------------
Confidence 3555678999999998753 4444444333345799999999999998
Q ss_pred HHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChhhhhcc-ccc---ccCcEE-Ee
Q 018320 86 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQ-LTL---EKGGIK-VT 160 (358)
Q Consensus 86 ~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~-~~~---~~g~i~-vd 160 (358)
+.+++.||++++++.|++++. ++.+..+.+.+|+++++|.||+++|.+|++++++.. +.. ++|+|. ||
T Consensus 265 -----~~l~~~GV~v~~~~~v~~i~~--~~~v~~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~g~~~~~~~~g~i~~vd 337 (493)
T 1y56_A 265 -----QELERWGIDYVHIPNVKRVEG--NEKVERVIDMNNHEYKVDALIFADGRRPDINPITQAGGKLRFRRGYYSPVLD 337 (493)
T ss_dssp -----HHHHHHTCEEEECSSEEEEEC--SSSCCEEEETTCCEEECSEEEECCCEEECCHHHHHTTCCEEEETTEEEECCC
T ss_pred -----HHHHhCCcEEEeCCeeEEEec--CCceEEEEeCCCeEEEeCEEEECCCcCcCchHHHhcCCCccccCCceeeccc
Confidence 456778999999999999985 334456778889999999999999999999887654 433 366777 89
Q ss_pred ccccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCCC
Q 018320 161 GRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPD 211 (358)
Q Consensus 161 ~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~ 211 (358)
++++ +.|+|||+|||+.. .++..|..||+.||.+|.+..
T Consensus 338 ~~~~-s~~~vya~GD~~~~-----------~~~~~A~~~g~~aa~~i~~~l 376 (493)
T 1y56_A 338 EYHR-IKDGIYVAGSAVSI-----------KPHYANYLEGKLVGAYILKEF 376 (493)
T ss_dssp TTSE-EETTEEECSTTTCC-----------CCHHHHHHHHHHHHHHHHHHT
T ss_pred cccC-cCCCEEEEeccCCc-----------cCHHHHHHHHHHHHHHHHHHc
Confidence 9999 99999999999975 357789999999999998643
No 88
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.72 E-value=2.4e-17 Score=162.64 Aligned_cols=160 Identities=16% Similarity=0.130 Sum_probs=112.1
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhC--CCcEEEEeeCCcccCcc-------------------CCHHHHHHHHHHHHh---
Q 018320 40 SGGNAVVIGGGYIGMECAASLVIN--KINVTMVFPEAHCMARL-------------------FTPKIASYYEEYYKS--- 95 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~--g~~Vtlv~~~~~~l~~~-------------------~~~~~~~~~~~~l~~--- 95 (358)
++++|+|||||.+|+|+|..|.+. +.+||+++|.+.+++.. ++++....+.+.+..
T Consensus 226 ~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~ 305 (463)
T 3s5w_A 226 KPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNY 305 (463)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTS
T ss_pred CCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhccCC
Confidence 478999999999999999999999 99999999998775521 122222222222222
Q ss_pred -----------------------CCCEEEcCCeeeEEEEcCCCcEEEEEcC---CCcE--EecCeEEEeeCCCCC--hhh
Q 018320 96 -----------------------KGVKFVKGTVLSSFDVDSNGKVVAVNLR---DGNR--LPTDMVVVGIGIRPN--TSL 145 (358)
Q Consensus 96 -----------------------~gV~v~~~~~v~~i~~~~~g~v~~v~~~---~g~~--i~~D~vi~a~G~~p~--~~l 145 (358)
.||++++++.|++++.++++ ..+.+. +|+. +++|.||+|+|++|+ .++
T Consensus 306 ~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~--~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~~~~~~ 383 (463)
T 3s5w_A 306 SVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQG--IELALRDAGSGELSVETYDAVILATGYERQLHRQL 383 (463)
T ss_dssp SCBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTE--EEEEEEETTTCCEEEEEESEEEECCCEECCC-CTT
T ss_pred CcCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCE--EEEEEEEcCCCCeEEEECCEEEEeeCCCCCCccch
Confidence 69999999999999874433 345544 6654 999999999999999 555
Q ss_pred hhcccccccCcEEEeccccCC-----CCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHH
Q 018320 146 FEGQLTLEKGGIKVTGRLQSS-----NSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAI 207 (358)
Q Consensus 146 ~~~~~~~~~g~i~vd~~~~t~-----~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i 207 (358)
+....... |+|.||+++++. .|+|||+|||....... .+ .+...|.+++++++..+
T Consensus 384 l~~l~~~~-g~i~v~~~~~~~~~~~~~~~Ifa~G~~~~~~g~~--~~---~l~~~a~r~~~i~~~~~ 444 (463)
T 3s5w_A 384 LEPLAEYL-GDHEIGRDYRLQTDERCKVAIYAQGFSQASHGLS--DT---LLSVLPVRAEEISGSLY 444 (463)
T ss_dssp TGGGGGGB-C--CCCTTSBCCBCTTBCSEEEESSCCHHHHCTT--TT---SSTTHHHHHHHHHHHHH
T ss_pred hHHHHHHh-CCcccCcccccccCCCCCCeEEEcCCCcccCCcC--cc---chhHHHHHHHHHHHHHH
Confidence 55432112 889999999974 46799999998754321 11 23446778888776654
No 89
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.71 E-value=4.7e-17 Score=146.30 Aligned_cols=154 Identities=14% Similarity=0.179 Sum_probs=111.2
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCc-----------------ccCccC-------CHHHHHHHHHHHHhC-
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAH-----------------CMARLF-------TPKIASYYEEYYKSK- 96 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~-----------------~l~~~~-------~~~~~~~~~~~l~~~- 96 (358)
.+|+|||||++|+++|..|++.|.+|+++++... +... + ..++...+.+.+++.
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~-~~d~~g~~~~~~~~~l~~~~~~~~ 82 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLER-AYDPKDERVWAFHARAKYLLEGLR 82 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHH-HCCTTCCCHHHHHHHHHHHHHTCT
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCccccccchhhHHhh-hccCCCCCHHHHHHHHHHHHHcCC
Confidence 5799999999999999999999999999998721 1111 1 136667788888887
Q ss_pred CCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCCh--------------------hhhh----ccccc
Q 018320 97 GVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNT--------------------SLFE----GQLTL 152 (358)
Q Consensus 97 gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~--------------------~l~~----~~~~~ 152 (358)
|++++ +++|+++.. +++.+..+.+.+|+++++|.||+|+|..++. .+.+ ..+..
T Consensus 83 gv~i~-~~~v~~i~~-~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~~~G~~~~~~g~~g~~~~~~l~~~l~~~g~~~ 160 (232)
T 2cul_A 83 PLHLF-QATATGLLL-EGNRVVGVRTWEGPPARGEKVVLAVGSFLGARLFLGGVVEEAGRLSEASYPDLLEDLSRLGFRF 160 (232)
T ss_dssp TEEEE-ECCEEEEEE-ETTEEEEEEETTSCCEECSEEEECCTTCSSCEEEETTEEESEEETTEECCSHHHHHHHHTTCCE
T ss_pred CcEEE-EeEEEEEEE-eCCEEEEEEECCCCEEECCEEEECCCCChhhceecCCccCCCCCCcccchhhhCHHHHhCCCeE
Confidence 99999 568999986 3455556788888899999999999985442 2222 11111
Q ss_pred ccCc----------------EEEec-------cccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcC
Q 018320 153 EKGG----------------IKVTG-------RLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIME 209 (358)
Q Consensus 153 ~~g~----------------i~vd~-------~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 209 (358)
..+. ..+.. ...|++|+|||+|||+ .. .....|+.||+.+|.+|+.
T Consensus 161 ~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a-~~----------g~~~~~~~~g~~~a~~i~~ 229 (232)
T 2cul_A 161 VEREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCV-RE----------GDYARMSEEGKRLAEHLLH 229 (232)
T ss_dssp EEEEEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEECGGGT-SC----------CCHHHHHHHHHHHHHHHHH
T ss_pred EccccccCcCCCCCCccCchhhcccCCCCCccccccccccceeeeecc-cC----------ccHHHHHHHHHHHHHHHHh
Confidence 1100 00110 1227999999999999 53 2567889999999999864
No 90
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.70 E-value=1.9e-17 Score=163.00 Aligned_cols=170 Identities=12% Similarity=0.086 Sum_probs=125.2
Q ss_pred CCCCCCccCCCCCCCC------CCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCc-EEEEeeCC
Q 018320 2 NMALKLEEFGLSGSDA------ENVCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKIN-VTMVFPEA 74 (358)
Q Consensus 2 ~~~~~P~~~~ipG~~~------~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~-Vtlv~~~~ 74 (358)
|...+|+.+++||.+. ..+++.+++.+...+ .+++|+|||+|++|+|+|..|++.|.+ ||++++.+
T Consensus 174 G~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~~~~~~~-------~~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~ 246 (447)
T 2gv8_A 174 GHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFREPELF-------VGESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGG 246 (447)
T ss_dssp CSSSSBCBCCCBTHHHHHHHSTTSEEEGGGCCCGGGG-------TTCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred CCCCCCCCCCCCChhhhhccCCccEEEecccCChhhc-------CCCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCC
Confidence 3334666667888641 236665554443222 579999999999999999999999999 99999987
Q ss_pred cccCccCCHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcE-EecCeEEEeeCCCCChhh-----hhc
Q 018320 75 HCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNR-LPTDMVVVGIGIRPNTSL-----FEG 148 (358)
Q Consensus 75 ~~l~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~-i~~D~vi~a~G~~p~~~l-----~~~ 148 (358)
.+ +++.||.+ ...|++++. +++ .|.+.||++ +++|.||+|+|++|++++ ++.
T Consensus 247 ~~----------------l~~~~i~~--~~~v~~~~~-~~~---~v~~~dG~~~~~~D~vi~atG~~~~~~~l~~~~l~~ 304 (447)
T 2gv8_A 247 GD----------------IQNESLQQ--VPEITKFDP-TTR---EIYLKGGKVLSNIDRVIYCTGYLYSVPFPSLAKLKS 304 (447)
T ss_dssp CS----------------CBCSSEEE--ECCEEEEET-TTT---EEEETTTEEECCCSEEEECCCBCCCCCCHHHHSCCS
T ss_pred Cc----------------CCCCCeEE--ecCeEEEec-CCC---EEEECCCCEeccCCEEEECCCCCcCCCCCccccccc
Confidence 65 34457775 467888863 222 577889976 799999999999999988 554
Q ss_pred c-ccc-ccCcEEEecccc---CCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCCC
Q 018320 149 Q-LTL-EKGGIKVTGRLQ---SSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPD 211 (358)
Q Consensus 149 ~-~~~-~~g~i~vd~~~~---t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~ 211 (358)
. ... .++.+.++.+.+ +++|++|++||+.... .+..|..||+.+|.+|.|..
T Consensus 305 ~~~~i~~~~~~~~~~~~~v~~~~~p~l~~~G~~~~~~-----------~~~~a~~qa~~~a~~~~g~~ 361 (447)
T 2gv8_A 305 PETKLIDDGSHVHNVYQHIFYIPDPTLAFVGLALHVV-----------PFPTSQAQAAFLARVWSGRL 361 (447)
T ss_dssp TTTCCCSSSSSCCSEETTTEETTCTTEEESSCCBSSC-----------HHHHHHHHHHHHHHHHTTSS
T ss_pred ccCceecCCCcccccccccccCCCCcEEEEecccccc-----------CchHHHHHHHHHHHHHcCCC
Confidence 2 111 244555555555 6899999999997642 46678999999999998754
No 91
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.49 E-value=2.9e-14 Score=143.57 Aligned_cols=181 Identities=17% Similarity=0.212 Sum_probs=116.3
Q ss_pred CCCccCCCCCCCC-CC-eEEecCHHHHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcc-cCc--
Q 018320 5 LKLEEFGLSGSDA-EN-VCYLRDLADANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHC-MAR-- 79 (358)
Q Consensus 5 ~~P~~~~ipG~~~-~~-v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~-l~~-- 79 (358)
-+|..+++||.+. .+ +++.....+. ....+|+|+|||+|.+|+|+|..|++.+.+||+++|.+++ ++.
T Consensus 147 s~p~~p~ipG~~~f~g~~~~~~~~~~~-------~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~i~p~~~ 219 (540)
T 3gwf_A 147 SAINFPNLPGLDTFEGETIHTAAWPEG-------KSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGN 219 (540)
T ss_dssp CSBCCCCCTTGGGCCSEEEEGGGCCSS-------CCCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCCEEECCC
T ss_pred ccCCCCCCCCccccCCCEEEeecCCCc-------cccccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCcc
Confidence 3566667888652 22 2332222111 1236899999999999999999999999999999999883 332
Q ss_pred -cCCHHHHHHHH--------------------------------------------------------------------
Q 018320 80 -LFTPKIASYYE-------------------------------------------------------------------- 90 (358)
Q Consensus 80 -~~~~~~~~~~~-------------------------------------------------------------------- 90 (358)
.+++...+.++
T Consensus 220 ~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 299 (540)
T 3gwf_A 220 RPVNPEQIAEIKADYDRIWERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAANEAA 299 (540)
T ss_dssp CBCCHHHHHHHHHTHHHHHHHHHTSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSCSCTTTCHHHHHHH
T ss_pred CCCCHHHHHHHHhccHHHHHHHHhccccccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhhhhhhhcCHHHHHHH
Confidence 12222221111
Q ss_pred -----HH---------------------------------HHhCCCEEEc--CCeeeEEEEcCCCcEEEEEcCCCcEEec
Q 018320 91 -----EY---------------------------------YKSKGVKFVK--GTVLSSFDVDSNGKVVAVNLRDGNRLPT 130 (358)
Q Consensus 91 -----~~---------------------------------l~~~gV~v~~--~~~v~~i~~~~~g~v~~v~~~~g~~i~~ 130 (358)
+. |.+.+|+++. +..|++|+. + .|.+.||+++++
T Consensus 300 ~~~~~~~~~~~v~dp~~~~~l~P~~~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~--~----gv~~~dG~~~~~ 373 (540)
T 3gwf_A 300 ASFIRAKVAEIIEDPETARKLMPKGLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTA--K----GVVTEDGVLHEL 373 (540)
T ss_dssp HHHHHHHHHHHCCSHHHHHHHCCCSCCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECS--S----EEEETTCCEEEC
T ss_pred HHHHHHHHHHHcCCHHHHHhCCCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCccEEec--C----eEEcCCCCEEEC
Confidence 00 1134788885 678888863 3 477899999999
Q ss_pred CeEEEeeCCCCChhhhhcccccccCcEEEecc----------ccC-CCCcEEEE-cccccccccccCcccccccHHHHHH
Q 018320 131 DMVVVGIGIRPNTSLFEGQLTLEKGGIKVTGR----------LQS-SNSSVYAV-GDVAAFPLKLLGETRRLEHVDSARK 198 (358)
Q Consensus 131 D~vi~a~G~~p~~~l~~~~~~~~~g~i~vd~~----------~~t-~~~~VyAi-GD~~~~~~~~~g~~~~~~~~~~A~~ 198 (358)
|.||+|||+++++.++...-....+++.+++. +.+ +.||+|.+ |..+... .....+..
T Consensus 374 DvIV~ATGf~~~~~~~~~~~i~g~~G~~l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~~~~----------s~~~~~e~ 443 (540)
T 3gwf_A 374 DVLVFATGFDAVDGNYRRIEIRGRDGLHINDHWDGQPTSYLGVSTANFPNWFMVLGPNGPFT----------NLPPSIET 443 (540)
T ss_dssp SEEEECCCBSCSSHHHHTSEEECGGGCBHHHHTSSSCCCBTTTBCTTCTTEEESSCSSCBCS----------CHHHHHHH
T ss_pred CEEEECCccCccccCcCcceEECCCCcCHHHhhccChhhccccccCCCCceEEEecCCCCCc----------cHHHHHHH
Confidence 99999999999986543221111223333322 222 78999999 7765411 23446677
Q ss_pred HHHHHHHHHc
Q 018320 199 SAKHAVAAIM 208 (358)
Q Consensus 199 ~g~~aa~~i~ 208 (358)
|++++++.|.
T Consensus 444 q~~~i~~~i~ 453 (540)
T 3gwf_A 444 QVEWISDTIG 453 (540)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888887764
No 92
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.48 E-value=1.1e-13 Score=128.10 Aligned_cols=165 Identities=15% Similarity=0.137 Sum_probs=115.4
Q ss_pred CcEEEEcCcHHHHHHHHHHHhC-CCcEEEEeeCCcccCc------------------------------------c-CCH
Q 018320 42 GNAVVIGGGYIGMECAASLVIN-KINVTMVFPEAHCMAR------------------------------------L-FTP 83 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~-g~~Vtlv~~~~~~l~~------------------------------------~-~~~ 83 (358)
.+|+|||||++|+++|..|++. |.+|+|+++.+.+... . ...
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 119 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAA 119 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCHH
T ss_pred cCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCHH
Confidence 4799999999999999999997 9999999998754211 0 123
Q ss_pred HHHHHHHHHHHh-CCCEEEcCCeeeEEEEcCCCcEEEEEcC---------CC-----cEEecCeEEEeeCCCCChhh---
Q 018320 84 KIASYYEEYYKS-KGVKFVKGTVLSSFDVDSNGKVVAVNLR---------DG-----NRLPTDMVVVGIGIRPNTSL--- 145 (358)
Q Consensus 84 ~~~~~~~~~l~~-~gV~v~~~~~v~~i~~~~~g~v~~v~~~---------~g-----~~i~~D~vi~a~G~~p~~~l--- 145 (358)
++...+.+.+.+ .||+++++++|+++.. +++.+..+.+. +| .++++|.||+|+|..++...
T Consensus 120 ~~~~~l~~~~~~~~gv~i~~~~~V~~i~~-~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~~ 198 (284)
T 1rp0_A 120 LFTSTIMSKLLARPNVKLFNAVAAEDLIV-KGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATGV 198 (284)
T ss_dssp HHHHHHHHHHHTSTTEEEEETEEEEEEEE-ETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHHH
T ss_pred HHHHHHHHHHHhcCCCEEEcCcEEEEEEe-cCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHHHHH
Confidence 455556666655 6999999999999986 34555445442 22 57999999999998876531
Q ss_pred --hhc-c--ccc-ccCcEEEec-------cccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCC
Q 018320 146 --FEG-Q--LTL-EKGGIKVTG-------RLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEP 210 (358)
Q Consensus 146 --~~~-~--~~~-~~g~i~vd~-------~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~ 210 (358)
+.. . +.. ...++.++. ..+++.|++|++||++.. .+|.++..+.+..+..+|+.+|.++...
T Consensus 199 ~~~~~~g~~~~v~~~~g~~~~~~~~~~v~~~~~~~p~i~a~G~~~~~---~~g~~~~gp~~~~~~~sG~~~a~~i~~~ 273 (284)
T 1rp0_A 199 KRLKSIGMIDHVPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAE---IDGAPRMGPTFGAMMISGQKAGQLALKA 273 (284)
T ss_dssp HHHHHTTSSSCCCCCEEECHHHHHHHHHHHCEEEETTEEECTHHHHH---HHTCEECCSCCHHHHHHHHHHHHHHHHH
T ss_pred HHhhhccCCCCcCCcCCchhhhhhHHHhhccccccCCEEEEeeehhh---hcCCCCcChHHHHHHHhHHHHHHHHHHH
Confidence 110 0 111 122333332 345678999999998653 2344555566778889999999998753
No 93
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.31 E-value=1.4e-12 Score=131.35 Aligned_cols=97 Identities=9% Similarity=0.107 Sum_probs=61.7
Q ss_pred CCEEEc--CCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChhhhhccccc-ccCcEEEecc-----------
Q 018320 97 GVKFVK--GTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQLTL-EKGGIKVTGR----------- 162 (358)
Q Consensus 97 gV~v~~--~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~~~~-~~g~i~vd~~----------- 162 (358)
+|+++. +..|++|+. + .|.+.|| ++++|.||+|||+.+++.++... .. ..++..+++.
T Consensus 352 nV~lv~~~~~~I~~it~--~----gv~~~dG-~~~~D~IV~ATGf~~~~~~~~~~-~i~g~~G~~l~~~w~~~~~~y~g~ 423 (545)
T 3uox_A 352 NVHLVDIREAPIQEVTP--E----GIKTADA-AYDLDVIIYATGFDAVTGSLDRI-DIRGKDNVRLIDAWAEGPSTYLGL 423 (545)
T ss_dssp TEEEEETTTSCEEEEET--T----EEEESSC-EEECSEEEECCCCBSSSCSCTTS-EEECGGGCBHHHHTTTSCCCBTTT
T ss_pred CEEEEecCCCCceEEcc--C----eEEeCCC-eeecCEEEECCccccccccCCCc-eEECCCCccHHHhhccccceeecc
Confidence 788885 678888873 3 4778999 99999999999999876544321 11 2233334332
Q ss_pred ccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHc
Q 018320 163 LQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIM 208 (358)
Q Consensus 163 ~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~ 208 (358)
+-.+.||+|.+.--.... +. ......+..|++.+++.|.
T Consensus 424 ~~~gfPN~f~~~gp~~~~----~~---~s~~~~~e~~~~~i~~~i~ 462 (545)
T 3uox_A 424 QARGFPNFFTLVGPHNGS----TF---CNVGVCGGLQAEWVLRMIS 462 (545)
T ss_dssp BCTTCTTEEECSSGGGTG----GG---SCHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCcEEEEeCCCCCC----cc---ccHHHHHHHHHHHHHHHHH
Confidence 223789999984322110 00 0234456778888888764
No 94
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.30 E-value=1.7e-12 Score=130.77 Aligned_cols=97 Identities=12% Similarity=0.163 Sum_probs=64.0
Q ss_pred CCEEE--cCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChhhhhcccccccCcEEEecccc----------
Q 018320 97 GVKFV--KGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQLTLEKGGIKVTGRLQ---------- 164 (358)
Q Consensus 97 gV~v~--~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~~~~~~g~i~vd~~~~---------- 164 (358)
+|+++ .+..|++++. + .|.+.| +++++|.||+|||+++++.++........+++.++++.+
T Consensus 352 ~v~lv~~~~~~i~~i~~--~----gv~~~d-~~~~~D~ii~atG~~~~~~~~~~~~i~g~~G~~l~~~w~~~~~~y~~~~ 424 (542)
T 1w4x_A 352 NVHLVDTLSAPIETITP--R----GVRTSE-REYELDSLVLATGFDALTGALFKIDIRGVGNVALKEKWAAGPRTYLGLS 424 (542)
T ss_dssp TEEEEETTTSCEEEECS--S----EEEESS-CEEECSEEEECCCCCCTTHHHHTSEEECGGGCBHHHHTTTSCCCBTTTB
T ss_pred CEEEEecCCCCceEEcC--C----eEEeCC-eEEecCEEEEcCCccccccCcCceeeECCCCCCHHHhhcCchheecccc
Confidence 46666 3567888853 2 477888 899999999999999988776542112233455554322
Q ss_pred C-CCCcEEEE-cccccccccccCccccccc-HHHHHHHHHHHHHHHcC
Q 018320 165 S-SNSSVYAV-GDVAAFPLKLLGETRRLEH-VDSARKSAKHAVAAIME 209 (358)
Q Consensus 165 t-~~~~VyAi-GD~~~~~~~~~g~~~~~~~-~~~A~~~g~~aa~~i~g 209 (358)
. ..||+|++ |+.+... .+. ...|..|++.++++|..
T Consensus 425 v~~~Pn~f~~~G~~~~~~---------~~~~~~~~e~q~~~ia~~i~~ 463 (542)
T 1w4x_A 425 TAGFPNLFFIAGPGSPSA---------LSNMLVSIEQHVEWVTDHIAY 463 (542)
T ss_dssp CTTSTTEEESSCTTSSGG---------GSCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCceEEEcCCCCCcc---------cccHHHHHHHHHHHHHHHHHH
Confidence 1 45667766 6664311 123 36788999999999864
No 95
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.28 E-value=3.7e-12 Score=128.41 Aligned_cols=65 Identities=15% Similarity=0.184 Sum_probs=47.2
Q ss_pred CCCccCCCCCCCC-CC-eEEecCHH-HHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcc
Q 018320 5 LKLEEFGLSGSDA-EN-VCYLRDLA-DANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHC 76 (358)
Q Consensus 5 ~~P~~~~ipG~~~-~~-v~~l~~~~-da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~ 76 (358)
-+|..+++||.+. ++ +++..... +.. ...+|+|+|||+|.+|+|+|..|++.+.+||+++|.+++
T Consensus 159 s~p~~p~ipG~~~f~g~~~~~~~~~~~~~-------~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ 226 (549)
T 4ap3_A 159 SNANTPAFDGLDRFTGDIVHTARWPHDGV-------DFTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANY 226 (549)
T ss_dssp EECCCCCCTTGGGCCSEEEEGGGCCTTCC-------CCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CCCCCCCCCCcccCCCceEEecccccccc-------ccCCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCc
Confidence 3566667888752 22 33322221 221 125899999999999999999999999999999999874
No 96
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.11 E-value=3.8e-11 Score=119.59 Aligned_cols=138 Identities=12% Similarity=0.096 Sum_probs=97.6
Q ss_pred CccCCCCCCCCCCeEEecCHHHHHHH---------HHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCccc
Q 018320 7 LEEFGLSGSDAENVCYLRDLADANRL---------VNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM 77 (358)
Q Consensus 7 P~~~~ipG~~~~~v~~l~~~~da~~i---------~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l 77 (358)
|...++++.+.+++++.++..+..++ ..........+|+|||||++|+.+|..|++.|.+|+|+|+.+.+.
T Consensus 49 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g 128 (497)
T 2bry_A 49 SGGGLSQYHKIKAQLNYWSAKSLWAKLDKRASQPVYQQGQACTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFS 128 (497)
T ss_dssp TTCHHHHHHHHHHTCCSTTTHHHHHHHHHHHTSGGGGGGTTTTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCC
T ss_pred CCCCcEeehhhHHHHHHHHHHHhhhhhhhhhccccccCccccCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccC
Confidence 33344555555566676777776665 111112246789999999999999999999999999999986542
Q ss_pred Cc----cC----------------------------CHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcC-CCcEEEEEc--
Q 018320 78 AR----LF----------------------------TPKIASYYEEYYKSKGVKFVKGTVLSSFDVDS-NGKVVAVNL-- 122 (358)
Q Consensus 78 ~~----~~----------------------------~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~-~g~v~~v~~-- 122 (358)
.. .. ..++.+.+.+.+++.||+++++++|++++.++ ++....+.+
T Consensus 129 ~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~ 208 (497)
T 2bry_A 129 RHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQP 208 (497)
T ss_dssp CCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEES
T ss_pred CCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEE
Confidence 10 00 04566677788888999999999999998631 222234544
Q ss_pred C-CC--cEEecCeEEEeeCCCCChh
Q 018320 123 R-DG--NRLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 123 ~-~g--~~i~~D~vi~a~G~~p~~~ 144 (358)
. +| .++.+|.||+|+|.++...
T Consensus 209 ~~~g~~~~i~ad~VV~A~G~~S~~r 233 (497)
T 2bry_A 209 NPPAQLASYEFDVLISAAGGKFVPE 233 (497)
T ss_dssp CCCHHHHTCCBSEEEECCCTTCCCT
T ss_pred CCCCCEEEEEcCEEEECCCCCcccc
Confidence 4 56 5799999999999987663
No 97
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.06 E-value=1.4e-09 Score=102.04 Aligned_cols=95 Identities=16% Similarity=0.221 Sum_probs=78.2
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCccc---------------------Ccc-CC---------HHHHHHHH
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM---------------------ARL-FT---------PKIASYYE 90 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l---------------------~~~-~~---------~~~~~~~~ 90 (358)
.+|+|||||+.|+.+|..|+++|.+|+++++.+.+. +.. .+ .++.+.+.
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 83 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYLA 83 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHHHH
Confidence 479999999999999999999999999999986531 100 00 57888888
Q ss_pred HHHHhCCCEEEcCCeeeEEEEcCCCcEEE-EEcCCCcEEecCeEEEeeCC
Q 018320 91 EYYKSKGVKFVKGTVLSSFDVDSNGKVVA-VNLRDGNRLPTDMVVVGIGI 139 (358)
Q Consensus 91 ~~l~~~gV~v~~~~~v~~i~~~~~g~v~~-v~~~~g~~i~~D~vi~a~G~ 139 (358)
+.+++.|++++++++|++++.++ +. .. +.+.+| ++.+|.||+|+|.
T Consensus 84 ~~~~~~~~~~~~~~~v~~i~~~~-~~-~~~v~~~~g-~~~~d~vV~AtG~ 130 (357)
T 4a9w_A 84 QYEQKYALPVLRPIRVQRVSHFG-ER-LRVVARDGR-QWLARAVISATGT 130 (357)
T ss_dssp HHHHHTTCCEECSCCEEEEEEET-TE-EEEEETTSC-EEEEEEEEECCCS
T ss_pred HHHHHcCCEEEcCCEEEEEEECC-Cc-EEEEEeCCC-EEEeCEEEECCCC
Confidence 88899999999999999998743 33 34 777777 8999999999995
No 98
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.97 E-value=1.7e-09 Score=108.74 Aligned_cols=101 Identities=18% Similarity=0.262 Sum_probs=83.3
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCccc-------------------------------------Ccc----
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM-------------------------------------ARL---- 80 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l-------------------------------------~~~---- 80 (358)
.+|+|||||+.|+.+|..|++.|.+|+|+|+.+.+. ...
T Consensus 108 ~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~~~ 187 (549)
T 3nlc_A 108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDPN 187 (549)
T ss_dssp CCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCTT
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEecccc
Confidence 579999999999999999999999999999875320 000
Q ss_pred C------------------------------CHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEec
Q 018320 81 F------------------------------TPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPT 130 (358)
Q Consensus 81 ~------------------------------~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~ 130 (358)
. ..++.+.+.+.+++.|++++++++|++++. +++.+..+.+.+|+++.+
T Consensus 188 ~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~-~~~~v~gV~l~~G~~i~A 266 (549)
T 3nlc_A 188 FYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHM-EDGQITGVTLSNGEEIKS 266 (549)
T ss_dssp CHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEE-SSSBEEEEEETTSCEEEC
T ss_pred ccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEE-eCCEEEEEEECCCCEEEC
Confidence 0 044566677788889999999999999987 456677788999999999
Q ss_pred CeEEEeeCCCCCh
Q 018320 131 DMVVVGIGIRPNT 143 (358)
Q Consensus 131 D~vi~a~G~~p~~ 143 (358)
|.||+|+|..+..
T Consensus 267 d~VVlA~G~~s~~ 279 (549)
T 3nlc_A 267 RHVVLAVGHSARD 279 (549)
T ss_dssp SCEEECCCTTCHH
T ss_pred CEEEECCCCChhh
Confidence 9999999998864
No 99
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.95 E-value=6.2e-09 Score=101.04 Aligned_cols=80 Identities=19% Similarity=0.285 Sum_probs=62.8
Q ss_pred hCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeC--------CCCChhhhhcc-cc--cccCcEEEeccc
Q 018320 95 SKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIG--------IRPNTSLFEGQ-LT--LEKGGIKVTGRL 163 (358)
Q Consensus 95 ~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G--------~~p~~~l~~~~-~~--~~~g~i~vd~~~ 163 (358)
+.| ++++++.|++|+.++++ ..|.+.+|+++.+|.||+|+| +.|+.+..... +. .....++|+..+
T Consensus 216 ~~g-~i~~~~~V~~i~~~~~~--v~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~~~~~~~~kv~~~~ 292 (431)
T 3k7m_X 216 EIP-EIRLQTVVTGIDQSGDV--VNVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEEGHGGQGLKILIHV 292 (431)
T ss_dssp TCS-CEESSCCEEEEECSSSS--EEEEETTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHHCCCCCEEEEEEEE
T ss_pred hCC-ceEeCCEEEEEEEcCCe--EEEEECCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHhCCCcceEEEEEEE
Confidence 346 99999999999864444 357788888899999999999 88887654322 22 234569999999
Q ss_pred cCCCCcEEEEcccc
Q 018320 164 QSSNSSVYAVGDVA 177 (358)
Q Consensus 164 ~t~~~~VyAiGD~~ 177 (358)
+|+.+++|+.||+.
T Consensus 293 ~~~~~~i~~~~d~~ 306 (431)
T 3k7m_X 293 RGAEAGIECVGDGI 306 (431)
T ss_dssp ESCCTTEEEEBSSS
T ss_pred CCCCcCceEcCCCC
Confidence 99999999999974
No 100
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.93 E-value=2.1e-09 Score=100.04 Aligned_cols=100 Identities=14% Similarity=0.191 Sum_probs=80.8
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCccc---------------Ccc---CCHHHHHHHHHHHHhCCCEEEcC
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM---------------ARL---FTPKIASYYEEYYKSKGVKFVKG 103 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l---------------~~~---~~~~~~~~~~~~l~~~gV~v~~~ 103 (358)
++|+|||||+.|+.+|..|++.|.+|+++++.+.+. +.. ...++...+.+.+++.|++++++
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTICLE 87 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEEECS
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcEEcc
Confidence 589999999999999999999999999999976432 110 13567788888888899999999
Q ss_pred CeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCC---CCCh
Q 018320 104 TVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGI---RPNT 143 (358)
Q Consensus 104 ~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~---~p~~ 143 (358)
++|++++.++++. ..+.+.+|+ +.+|.||+|+|. .|..
T Consensus 88 ~~v~~i~~~~~~~-~~v~~~~g~-~~~d~vVlAtG~~~~~p~~ 128 (332)
T 3lzw_A 88 QAVESVEKQADGV-FKLVTNEET-HYSKTVIITAGNGAFKPRK 128 (332)
T ss_dssp CCEEEEEECTTSC-EEEEESSEE-EEEEEEEECCTTSCCEECC
T ss_pred CEEEEEEECCCCc-EEEEECCCE-EEeCEEEECCCCCcCCCCC
Confidence 9999998744423 357777775 999999999999 6654
No 101
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.93 E-value=3.1e-09 Score=99.17 Aligned_cols=102 Identities=16% Similarity=0.204 Sum_probs=79.6
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCC----cc------------cCc----cCCHHHHHHHHHHHHhCCCE
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEA----HC------------MAR----LFTPKIASYYEEYYKSKGVK 99 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~----~~------------l~~----~~~~~~~~~~~~~l~~~gV~ 99 (358)
..++|+|||||+.|+.+|..|++.|.+|+|+++.+ .+ ++. ...+++...+.+.+++.|++
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 100 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFGTE 100 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHcCCE
Confidence 35789999999999999999999999999999954 11 111 01357788888999999999
Q ss_pred EEcCCeeeEEEEcCCCcEEEEEc---CCCcEEecCeEEEeeCCCCChh
Q 018320 100 FVKGTVLSSFDVDSNGKVVAVNL---RDGNRLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 100 v~~~~~v~~i~~~~~g~v~~v~~---~~g~~i~~D~vi~a~G~~p~~~ 144 (358)
++.++ +++++.+ ++.+ .+.+ .++.++.+|.+|+|+|.+|...
T Consensus 101 i~~~~-v~~i~~~-~~~~-~v~~~~~~~~~~~~~d~vvlAtG~~~~~~ 145 (338)
T 3itj_A 101 IITET-VSKVDLS-SKPF-KLWTEFNEDAEPVTTDAIILATGASAKRM 145 (338)
T ss_dssp EECSC-EEEEECS-SSSE-EEEETTCSSSCCEEEEEEEECCCEEECCC
T ss_pred EEEeE-EEEEEEc-CCEE-EEEEEecCCCcEEEeCEEEECcCCCcCCC
Confidence 99988 9999863 3333 3444 3677899999999999877643
No 102
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.92 E-value=5.5e-09 Score=96.72 Aligned_cols=100 Identities=10% Similarity=0.194 Sum_probs=79.4
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeC--Ccc--------cCc---cCCHHHHHHHHHHHHhCCCEEEcCCeeeE
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPE--AHC--------MAR---LFTPKIASYYEEYYKSKGVKFVKGTVLSS 108 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~--~~~--------l~~---~~~~~~~~~~~~~l~~~gV~v~~~~~v~~ 108 (358)
.+|+|||||+.|+.+|..|++.|.+|+++++. ..+ .+. ....++.+.+.+.+++.|++++. +++++
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~ 94 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLL-DIVEK 94 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEE-SCEEE
T ss_pred cCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEE-EEEEE
Confidence 58999999999999999999999999999985 111 111 11256777888888899999999 89999
Q ss_pred EEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChh
Q 018320 109 FDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 109 i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 144 (358)
++.+++. ..+.+.+|.++.+|.+|+|+|..|...
T Consensus 95 i~~~~~~--~~v~~~~g~~~~~d~lvlAtG~~~~~~ 128 (323)
T 3f8d_A 95 IENRGDE--FVVKTKRKGEFKADSVILGIGVKRRKL 128 (323)
T ss_dssp EEEC--C--EEEEESSSCEEEEEEEEECCCCEECCC
T ss_pred EEecCCE--EEEEECCCCEEEcCEEEECcCCCCccC
Confidence 9864333 457778888999999999999887654
No 103
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.89 E-value=9.6e-09 Score=103.24 Aligned_cols=102 Identities=23% Similarity=0.235 Sum_probs=82.5
Q ss_pred CcEEEEcCcHHHHHHHHHHH-hCCCcEEEEeeCCcccC--------c------------cC----------------CHH
Q 018320 42 GNAVVIGGGYIGMECAASLV-INKINVTMVFPEAHCMA--------R------------LF----------------TPK 84 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~-~~g~~Vtlv~~~~~~l~--------~------------~~----------------~~~ 84 (358)
.+|+|||||+.|+.+|..|+ +.|.+|+|+++.+.+.. . .+ .++
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~e 88 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQPE 88 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHHH
Confidence 47999999999999999999 99999999999753310 0 01 246
Q ss_pred HHHHHHHHHHhCCC--EEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCC--CCCh
Q 018320 85 IASYYEEYYKSKGV--KFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGI--RPNT 143 (358)
Q Consensus 85 ~~~~~~~~l~~~gV--~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~--~p~~ 143 (358)
+.+.+.+..++.|+ +++++++|++++.++++....|.+.+|+++.+|.||+|+|. +|..
T Consensus 89 i~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~ 151 (540)
T 3gwf_A 89 ILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINF 151 (540)
T ss_dssp HHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBCC
T ss_pred HHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCCC
Confidence 67778888888898 89999999999876554556788889999999999999994 5553
No 104
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.89 E-value=7.2e-09 Score=94.89 Aligned_cols=100 Identities=16% Similarity=0.264 Sum_probs=77.5
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcc---------cCc---cCCHHHHHHHHHHHHhC-CCEEEcCCeeeE
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHC---------MAR---LFTPKIASYYEEYYKSK-GVKFVKGTVLSS 108 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~---------l~~---~~~~~~~~~~~~~l~~~-gV~v~~~~~v~~ 108 (358)
.+|+|||||+.|+.+|..|++.|.+|+|+++.+.. ++. ....++...+.+.+++. +++++.+ ++++
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~ 81 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWVEG-RVTD 81 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEES-CEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEEe-EEEE
Confidence 47999999999999999999999999999975321 111 11246677777777776 7888764 8999
Q ss_pred EEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChh
Q 018320 109 FDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 109 i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 144 (358)
++.++++ ..+.+.+|+++.+|.||+|+|.+|...
T Consensus 82 i~~~~~~--~~v~~~~g~~~~~d~vviAtG~~~~~~ 115 (297)
T 3fbs_A 82 AKGSFGE--FIVEIDGGRRETAGRLILAMGVTDELP 115 (297)
T ss_dssp EEEETTE--EEEEETTSCEEEEEEEEECCCCEEECC
T ss_pred EEEcCCe--EEEEECCCCEEEcCEEEECCCCCCCCC
Confidence 9864333 467788898999999999999887543
No 105
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.89 E-value=8e-09 Score=104.03 Aligned_cols=103 Identities=21% Similarity=0.284 Sum_probs=83.3
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccC--------c------------cC----------------CHH
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMA--------R------------LF----------------TPK 84 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~--------~------------~~----------------~~~ 84 (358)
..+|+|||||+.|+.+|..|++.|.+|+|+++.+.+.. . .+ .++
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~e 100 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPE 100 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHHH
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHHH
Confidence 35899999999999999999999999999999653310 0 01 246
Q ss_pred HHHHHHHHHHhCCC--EEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeC--CCCCh
Q 018320 85 IASYYEEYYKSKGV--KFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIG--IRPNT 143 (358)
Q Consensus 85 ~~~~~~~~l~~~gV--~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G--~~p~~ 143 (358)
+.+.+.+.+++.|+ +++++++|++++.+++.....|++.+|+++.+|.||+|+| .+|..
T Consensus 101 i~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~~ 163 (549)
T 4ap3_A 101 ILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNANT 163 (549)
T ss_dssp HHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECCC
T ss_pred HHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCCC
Confidence 77788888888898 8999999999987555545678888999999999999999 55554
No 106
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.88 E-value=9.7e-09 Score=96.06 Aligned_cols=98 Identities=12% Similarity=0.251 Sum_probs=78.7
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCccc------------------CccCCHHHHHHHHHHHHhCCCEEEc
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM------------------ARLFTPKIASYYEEYYKSKGVKFVK 102 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l------------------~~~~~~~~~~~~~~~l~~~gV~v~~ 102 (358)
..+|+|||||+.|+.+|..|++.|.+|+|+++.+.+. +.....++.+.+.+.+++.+++++.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 84 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVYSL 84 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEEEE
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEEEe
Confidence 3589999999999999999999999999999876431 0001256667777778888999999
Q ss_pred CCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCC
Q 018320 103 GTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIR 140 (358)
Q Consensus 103 ~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~ 140 (358)
+++|++++.+++ ...+.+.+|+++.+|.||+|+|..
T Consensus 85 ~~~v~~i~~~~~--~~~v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 85 GERAETLEREGD--LFKVTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp SCCEEEEEEETT--EEEEEETTSCEEEEEEEEECCTTS
T ss_pred CCEEEEEEECCC--EEEEEECCCCEEEeCEEEECCCCC
Confidence 999999986433 245777788889999999999984
No 107
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.88 E-value=6.6e-09 Score=101.13 Aligned_cols=99 Identities=20% Similarity=0.241 Sum_probs=79.0
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCc---------------------------c-------------
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR---------------------------L------------- 80 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~---------------------------~------------- 80 (358)
..+|+|||||++|+.+|..|++.|.+|+|+|+.+.+... .
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 106 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQDF 106 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHHH
Confidence 468999999999999999999999999999987653110 0
Q ss_pred -----------------------CCHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEee
Q 018320 81 -----------------------FTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGI 137 (358)
Q Consensus 81 -----------------------~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~ 137 (358)
-..++.+.+.+.+++.||+++++++|++++.++++ ..+.+.+| ++.+|.||+|+
T Consensus 107 ~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~--~~V~~~~g-~i~ad~VIlAt 183 (417)
T 3v76_A 107 VALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASG--FRVTTSAG-TVDAASLVVAS 183 (417)
T ss_dssp HHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTE--EEEEETTE-EEEESEEEECC
T ss_pred HHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCE--EEEEECCc-EEEeeEEEECC
Confidence 01255666777888889999999999999864433 45777777 89999999999
Q ss_pred CCCCC
Q 018320 138 GIRPN 142 (358)
Q Consensus 138 G~~p~ 142 (358)
|..+.
T Consensus 184 G~~S~ 188 (417)
T 3v76_A 184 GGKSI 188 (417)
T ss_dssp CCSSC
T ss_pred CCccC
Confidence 98864
No 108
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.87 E-value=1.3e-08 Score=96.35 Aligned_cols=99 Identities=14% Similarity=0.183 Sum_probs=80.4
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCccc-------C--------c---cCCHHHHHHHHHHHHhCCCEEEc
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM-------A--------R---LFTPKIASYYEEYYKSKGVKFVK 102 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l-------~--------~---~~~~~~~~~~~~~l~~~gV~v~~ 102 (358)
..+|+|||||+.|+.+|..|++.|.+|+|+++.+.+. + . ....++.+.+.+.+++.+++++.
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 93 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDVVL 93 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEEEc
Confidence 4689999999999999999999999999999876431 1 0 01256777788888888999999
Q ss_pred CCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCC
Q 018320 103 GTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIR 140 (358)
Q Consensus 103 ~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~ 140 (358)
+++|++++.++++. ..+.+.+|+++.+|.||+|+|..
T Consensus 94 ~~~v~~i~~~~~~~-~~v~~~~g~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 94 NETVTKYTKLDDGT-FETRTNTGNVYRSRAVLIAAGLG 130 (360)
T ss_dssp SCCEEEEEECTTSC-EEEEETTSCEEEEEEEEECCTTC
T ss_pred CCEEEEEEECCCce-EEEEECCCcEEEeeEEEEccCCC
Confidence 99999998744433 35777888899999999999984
No 109
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.86 E-value=8.2e-09 Score=99.40 Aligned_cols=100 Identities=19% Similarity=0.333 Sum_probs=76.8
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccC-c-cCCH---------HHHHHHHHHHHhCCCEEEcCCeeeEE
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMA-R-LFTP---------KIASYYEEYYKSKGVKFVKGTVLSSF 109 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~-~-~~~~---------~~~~~~~~~l~~~gV~v~~~~~v~~i 109 (358)
.-+|+|||||+.|+.+|..|...+.+|||+++.+.+.- + .++. ++.....+.+++.||+++++++|+++
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~~V~~i 88 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFATSI 88 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSCCEEEE
T ss_pred CCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCCEEEEE
Confidence 34899999999999999999888999999999876421 0 0111 11122345677889999999999999
Q ss_pred EEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChh
Q 018320 110 DVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 110 ~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 144 (358)
+. ++. .+++.+|+++.+|.+|+|||.+|...
T Consensus 89 d~-~~~---~v~~~~g~~~~yd~lvlAtG~~p~~p 119 (385)
T 3klj_A 89 DP-NNK---LVTLKSGEKIKYEKLIIASGSIANKI 119 (385)
T ss_dssp ET-TTT---EEEETTSCEEECSEEEECCCEEECCC
T ss_pred EC-CCC---EEEECCCCEEECCEEEEecCCCcCCC
Confidence 85 232 46778999999999999999887653
No 110
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.86 E-value=5.1e-08 Score=97.03 Aligned_cols=196 Identities=11% Similarity=0.078 Sum_probs=106.1
Q ss_pred CCccCCCCCCCCCCeEEecCHHHHHHHHHHH-hcCCCCcEEEEcCcHHHHHHHHHHHhC--CCcEEEEeeCCcccCcc--
Q 018320 6 KLEEFGLSGSDAENVCYLRDLADANRLVNVM-KSCSGGNAVVIGGGYIGMECAASLVIN--KINVTMVFPEAHCMARL-- 80 (358)
Q Consensus 6 ~P~~~~ipG~~~~~v~~l~~~~da~~i~~~l-~~~~~~~vvVIGgG~~gle~A~~L~~~--g~~Vtlv~~~~~~l~~~-- 80 (358)
.|..+++++.. ..+++-..+.+... ... ....+|+|+|||+|.+|+|++..|++. +.+|+++.|.+.+.+..
T Consensus 213 ~P~iP~~~~~~-g~v~Hss~y~~~~~--~~~~~~~~gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~~~p~~~s 289 (501)
T 4b63_A 213 TAKMPSGLPQD-PRIIHSSKYCTTLP--ALLKDKSKPYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSAMRPSDDS 289 (501)
T ss_dssp EECCCTTSCCC-TTEEEGGGHHHHHH--HHSCCTTSCCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSSCCBCCCC
T ss_pred CCCCCCCCCCC-cceeeccccccchh--hccccccCCcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCcccccccc
Confidence 34443333332 45766544433221 111 123689999999999999999999875 78999999987654321
Q ss_pred ------CCHH-------------------------------HHHHHHHHH-Hh---------CCCEEEcCCeeeEEEEcC
Q 018320 81 ------FTPK-------------------------------IASYYEEYY-KS---------KGVKFVKGTVLSSFDVDS 113 (358)
Q Consensus 81 ------~~~~-------------------------------~~~~~~~~l-~~---------~gV~v~~~~~v~~i~~~~ 113 (358)
++|+ +.+.+.+.+ ++ ....+..+..+..++...
T Consensus 290 ~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~~~~~~v~~~li~~i~~~~y~~~~~~~~~~~~~~~l~~~~~v~~~~~~~ 369 (501)
T 4b63_A 290 PFVNEIFNPERVDKFYSQSAAERQRSLLADKATNYSVVRLELIEEIYNDMYLQRVKNPDETQWQHRILPERKITRVEHHG 369 (501)
T ss_dssp TTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCSCGGGCSSEEECSEEEEEEECCS
T ss_pred ccchhhcCHHHHHHHHhCCHHHHHHHHHHHHhhhhcccCHHHHHHHHHHHHhhccCCCcccccceeecCCcceeeeeecC
Confidence 1111 111111111 10 123456666666655322
Q ss_pred C-CcE-----------EEEEcCCCcEEecCeEEEeeCCCCChh-hhhcc---ccc-ccCcEEEeccccC--------CCC
Q 018320 114 N-GKV-----------VAVNLRDGNRLPTDMVVVGIGIRPNTS-LFEGQ---LTL-EKGGIKVTGRLQS--------SNS 168 (358)
Q Consensus 114 ~-g~v-----------~~v~~~~g~~i~~D~vi~a~G~~p~~~-l~~~~---~~~-~~g~i~vd~~~~t--------~~~ 168 (358)
. +.+ ..+.+.+|+++++|.||+|||++|+.. ++... +.. ..|.+.|+..++- ..+
T Consensus 370 ~~~~~~v~~~~~~~~~~~v~~~dg~~~~~D~VI~ATGy~~~~p~~L~~~~~~l~~d~~g~~~v~rdy~~~~~~~~~~~~~ 449 (501)
T 4b63_A 370 PQSRMRIHLKSSKPESEGAANDVKETLEVDALMVATGYNRNAHERLLSKVQHLRPTGQDQWKPHRDYRVEMDPSKVSSEA 449 (501)
T ss_dssp SSSCEEEEEEESCC--------CCCEEEESEEEECCCEECCTHHHHTGGGGGGSSTTCCSCCBCTTSBBCCCTTTBCTTC
T ss_pred CCCeEEEEeeeeEEeCCeeEeCCCeEEECCEEEECcCCCCCCcchhcchhhhcCcCcCCCeeeCCCcEEeecCCccCCCc
Confidence 1 221 124466889999999999999998864 22222 222 4577778765542 246
Q ss_pred cEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCC
Q 018320 169 SVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEP 210 (358)
Q Consensus 169 ~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~ 210 (358)
+||+.|-+-..... +.+ -+--.|.+.|++ ++.|+|.
T Consensus 450 ~i~~qg~~~~thG~--~~~---~Ls~~a~R~~~I-~~~l~g~ 485 (501)
T 4b63_A 450 GIWLQGCNERTHGL--SDS---LLSVLAVRGGEM-VQSIFGE 485 (501)
T ss_dssp EEEECSCCHHHHCT--TTT---SSTTHHHHHHHH-HHHHHHH
T ss_pred eEEecCCCcccCCc--chh---hHHHHHHHHHHH-HHHHhcc
Confidence 79999954322111 111 111246676765 4556664
No 111
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.85 E-value=1.7e-08 Score=96.47 Aligned_cols=98 Identities=22% Similarity=0.273 Sum_probs=80.2
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCc-----------------------------------------
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR----------------------------------------- 79 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~----------------------------------------- 79 (358)
..+|+|||||+.|+.+|..|++.|.+|+|+|+.+.+...
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~ 90 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNKS 90 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCce
Confidence 468999999999999999999999999999987654210
Q ss_pred --cCC-----------HHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCCh
Q 018320 80 --LFT-----------PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNT 143 (358)
Q Consensus 80 --~~~-----------~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 143 (358)
.++ .++.+.+.+.+++.||+++.+++|++++. ++ .+++.+|+++.+|.||.|+|..+..
T Consensus 91 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~---~v~~~~g~~~~ad~vV~AdG~~s~v 162 (379)
T 3alj_A 91 VSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP--VG---RLTLQTGEVLEADLIVGADGVGSKV 162 (379)
T ss_dssp EEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--TT---EEEETTSCEEECSEEEECCCTTCHH
T ss_pred eeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC---EEEECCCCEEEcCEEEECCCccHHH
Confidence 000 34566777888888999999999999975 44 4677889899999999999988754
No 112
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.84 E-value=1.5e-08 Score=93.65 Aligned_cols=98 Identities=15% Similarity=0.256 Sum_probs=77.0
Q ss_pred cEEEEcCcHHHHHHHHHHHhCCC-cEEEEeeCCc-----------ccCc---cCC-HHHHHHHHHHHHhCCCEEEcCCee
Q 018320 43 NAVVIGGGYIGMECAASLVINKI-NVTMVFPEAH-----------CMAR---LFT-PKIASYYEEYYKSKGVKFVKGTVL 106 (358)
Q Consensus 43 ~vvVIGgG~~gle~A~~L~~~g~-~Vtlv~~~~~-----------~l~~---~~~-~~~~~~~~~~l~~~gV~v~~~~~v 106 (358)
+++|||||+.|+.+|..|++.|. +|+++++... ..+. .++ .++.+.+.+.+++.|++++. .++
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~-~~v 81 (311)
T 2q0l_A 3 DCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEM-TAV 81 (311)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSSEEEECSSSTTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEEC-SCE
T ss_pred eEEEECccHHHHHHHHHHHHCCCCcEEEEcCCCCCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEEE-EEE
Confidence 69999999999999999999999 9999998521 0111 112 46677778888889999998 789
Q ss_pred eEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCCh
Q 018320 107 SSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNT 143 (358)
Q Consensus 107 ~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 143 (358)
++++.+++ . ..+.+.+|+++.+|.||+|+|.+|..
T Consensus 82 ~~i~~~~~-~-~~v~~~~g~~~~~~~vv~AtG~~~~~ 116 (311)
T 2q0l_A 82 QRVSKKDS-H-FVILAEDGKTFEAKSVIIATGGSPKR 116 (311)
T ss_dssp EEEEEETT-E-EEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EEEEEcCC-E-EEEEEcCCCEEECCEEEECCCCCCCC
Confidence 99876333 2 34667788899999999999987654
No 113
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.84 E-value=3.2e-09 Score=103.78 Aligned_cols=100 Identities=21% Similarity=0.299 Sum_probs=77.8
Q ss_pred CcEEEEcCcHHHHHHHHHHHh---CCCcEEEEeeCCcccCc----------cCCHHHHHHHHHHHHhCCCEEEcCCeeeE
Q 018320 42 GNAVVIGGGYIGMECAASLVI---NKINVTMVFPEAHCMAR----------LFTPKIASYYEEYYKSKGVKFVKGTVLSS 108 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~---~g~~Vtlv~~~~~~l~~----------~~~~~~~~~~~~~l~~~gV~v~~~~~v~~ 108 (358)
++|+|||||+.|+++|..|++ .|.+|||+++.+.+.-. ....++...+.+.+++.||+++. .++++
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~ 83 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIA-QSAEQ 83 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEEC-SCEEE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEEE-eEEEE
Confidence 689999999999999999999 89999999998864211 01123333456777889999985 58999
Q ss_pred EEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChhhh
Q 018320 109 FDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLF 146 (358)
Q Consensus 109 i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~ 146 (358)
++.+ +. .+.+.+|+++.+|.+|+|+|.+|+...+
T Consensus 84 id~~-~~---~V~~~~g~~i~~d~lviAtG~~~~~~~i 117 (437)
T 3sx6_A 84 IDAE-AQ---NITLADGNTVHYDYLMIATGPKLAFENV 117 (437)
T ss_dssp EETT-TT---EEEETTSCEEECSEEEECCCCEECGGGS
T ss_pred EEcC-CC---EEEECCCCEEECCEEEECCCCCcCcccC
Confidence 9752 22 4677888899999999999999886543
No 114
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.83 E-value=2.4e-08 Score=98.39 Aligned_cols=103 Identities=16% Similarity=0.211 Sum_probs=77.4
Q ss_pred CcEEEEcCcHHHHHHHHHHHh---CCCc---EEEEeeCCcccCc------------------------------------
Q 018320 42 GNAVVIGGGYIGMECAASLVI---NKIN---VTMVFPEAHCMAR------------------------------------ 79 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~---~g~~---Vtlv~~~~~~l~~------------------------------------ 79 (358)
++|+|||||+.|+.+|..|++ .|.+ |+++++.+.+...
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 689999999999999999999 9999 9999997643100
Q ss_pred --------------cC-CHHHHHHHHHHHHhCCCE--EEcCCeeeEEEEcCCCcEEEEEcCC---C--cEEecCeEEEee
Q 018320 80 --------------LF-TPKIASYYEEYYKSKGVK--FVKGTVLSSFDVDSNGKVVAVNLRD---G--NRLPTDMVVVGI 137 (358)
Q Consensus 80 --------------~~-~~~~~~~~~~~l~~~gV~--v~~~~~v~~i~~~~~g~v~~v~~~~---g--~~i~~D~vi~a~ 137 (358)
.. ..++.+.+.+.+++.|++ ++++++|++++.++++....|++.+ | .++.+|.||+|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAt 162 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCT 162 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECC
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECC
Confidence 00 134566677777888998 9999999999874442123454443 4 578999999999
Q ss_pred C--CCCChh
Q 018320 138 G--IRPNTS 144 (358)
Q Consensus 138 G--~~p~~~ 144 (358)
| .+|+..
T Consensus 163 G~~s~p~~p 171 (464)
T 2xve_A 163 GHFSTPYVP 171 (464)
T ss_dssp CSSSSBCCC
T ss_pred CCCCCCccC
Confidence 9 677654
No 115
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.83 E-value=1.9e-08 Score=93.23 Aligned_cols=102 Identities=11% Similarity=0.110 Sum_probs=72.2
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcc------cC------ccCCHHHHHHHHHHHHhCCCEEEcCCeeeEE
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHC------MA------RLFTPKIASYYEEYYKSKGVKFVKGTVLSSF 109 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~------l~------~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i 109 (358)
-.|+|||||+.|+.+|..|++.|.+|+|+++...- .+ ....+++.+...+.+.+.+...+....+..+
T Consensus 7 yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (304)
T 4fk1_A 7 IDCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYEKTVVMI 86 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEECCEEEE
T ss_pred cCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEeeEEEEe
Confidence 47999999999999999999999999999986321 01 1122455555555565555444444455566
Q ss_pred EEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChh
Q 018320 110 DVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 110 ~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 144 (358)
...+++. ..+.+.+|+++.+|.||+|||.+|...
T Consensus 87 ~~~~~~~-~~v~~~~g~~~~a~~liiATGs~p~~p 120 (304)
T 4fk1_A 87 TKQSTGL-FEIVTKDHTKYLAERVLLATGMQEEFP 120 (304)
T ss_dssp EECTTSC-EEEEETTCCEEEEEEEEECCCCEEECC
T ss_pred eecCCCc-EEEEECCCCEEEeCEEEEccCCccccc
Confidence 5534443 467788999999999999999887543
No 116
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.82 E-value=1.3e-08 Score=94.08 Aligned_cols=101 Identities=14% Similarity=0.178 Sum_probs=78.7
Q ss_pred cEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCC--ccc-----------CccCCHHHHHHHHHHHHhCCCEEEcCCeeeEE
Q 018320 43 NAVVIGGGYIGMECAASLVINKINVTMVFPEA--HCM-----------ARLFTPKIASYYEEYYKSKGVKFVKGTVLSSF 109 (358)
Q Consensus 43 ~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~--~~l-----------~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i 109 (358)
+++|||||+.|+.+|..|++.|.+|+++++.. .+. +....+++...+.+.+++.|++++.+++++.+
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i 82 (310)
T 1fl2_A 3 DVLIVGSGPAGAAAAIYSARKGIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQSASKL 82 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCCEEEECSSTTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEECSCCEEEE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEccCEEEEE
Confidence 69999999999999999999999999997531 110 00012467778888888999999999999999
Q ss_pred EEcCC-CcEEEEEcCCCcEEecCeEEEeeCCCCCh
Q 018320 110 DVDSN-GKVVAVNLRDGNRLPTDMVVVGIGIRPNT 143 (358)
Q Consensus 110 ~~~~~-g~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 143 (358)
+.+.+ +....+.+.+|+++.+|.+|+|+|.+|..
T Consensus 83 ~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~ 117 (310)
T 1fl2_A 83 IPAAVEGGLHQIETASGAVLKARSIIVATGAKWRN 117 (310)
T ss_dssp ECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EecccCCceEEEEECCCCEEEeCEEEECcCCCcCC
Confidence 75322 22345777888899999999999987754
No 117
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.81 E-value=7.7e-08 Score=91.37 Aligned_cols=98 Identities=16% Similarity=0.206 Sum_probs=71.7
Q ss_pred cEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCc-------------------------------------------
Q 018320 43 NAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR------------------------------------------- 79 (358)
Q Consensus 43 ~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~------------------------------------------- 79 (358)
.|+|||||++|+-+|..|++.|.+|+|+|+.+.+...
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRPII 85 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSCEE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCceEee
Confidence 6999999999999999999999999999986543110
Q ss_pred ------------cCC-HHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEc-CCC--cEEecCeEEEeeCCCC
Q 018320 80 ------------LFT-PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNL-RDG--NRLPTDMVVVGIGIRP 141 (358)
Q Consensus 80 ------------~~~-~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~-~~g--~~i~~D~vi~a~G~~p 141 (358)
.++ ..+...+.+...+.|++++.+++++.+.. +++.+..+.. .++ .++.+|.||-|.|..+
T Consensus 86 ~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~-~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S 162 (397)
T 3oz2_A 86 LQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIK-ENGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp EECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEE-ETTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred ccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeee-ccceeeeeeecccccceEEEEeEEEeCCcccc
Confidence 000 22345556667778999999999999876 4454444433 233 4688999999999654
No 118
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.81 E-value=4.7e-08 Score=92.52 Aligned_cols=98 Identities=16% Similarity=0.215 Sum_probs=75.3
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCC-cEEEEeeCC------------ccc-Cc---------------------------c
Q 018320 42 GNAVVIGGGYIGMECAASLVINKI-NVTMVFPEA------------HCM-AR---------------------------L 80 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~-~Vtlv~~~~------------~~l-~~---------------------------~ 80 (358)
.+|+|||||+.|+.+|..|++.|. +|+|+++.+ +++ +. .
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 84 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKDFGITDVIILEKGTVGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNEEH 84 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSTTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHCCSS
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCCCCCccccCcccccccCcchhcccCCchhhhhccccccccccccccC
Confidence 479999999999999999999999 999999875 000 00 0
Q ss_pred CC-HHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCC
Q 018320 81 FT-PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPN 142 (358)
Q Consensus 81 ~~-~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~ 142 (358)
.+ .++...+.+.+++.|++++.++.|++++.++++ ..+.+.++ ++.+|.||+|+|..+.
T Consensus 85 ~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~g-~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 85 ISGETYAEYLQVVANHYELNIFENTVVTNISADDAY--YTIATTTE-TYHADYIFVATGDYNF 144 (369)
T ss_dssp CBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSS--EEEEESSC-CEEEEEEEECCCSTTS
T ss_pred CCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCe--EEEEeCCC-EEEeCEEEECCCCCCc
Confidence 01 345566677778899999999999999874333 34666666 6999999999998754
No 119
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.80 E-value=1.5e-08 Score=101.88 Aligned_cols=103 Identities=17% Similarity=0.182 Sum_probs=81.1
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCccc-------------------------C---------cc--CCHH
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM-------------------------A---------RL--FTPK 84 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l-------------------------~---------~~--~~~~ 84 (358)
..+|+|||||+.|+.+|..|++.|.+|+|+++.+.+. + .. -.++
T Consensus 9 ~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~e 88 (545)
T 3uox_A 9 ALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQPE 88 (545)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHHH
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHHH
Confidence 3579999999999999999999999999999975431 0 00 1256
Q ss_pred HHHHHHHHHHhCCC--EEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeC--CCCCh
Q 018320 85 IASYYEEYYKSKGV--KFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIG--IRPNT 143 (358)
Q Consensus 85 ~~~~~~~~l~~~gV--~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G--~~p~~ 143 (358)
+...+.+..++.|+ +++++++|++++.+++.....|++.+|+++.+|.||+|+| .+|+.
T Consensus 89 i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~~ 151 (545)
T 3uox_A 89 MLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASRM 151 (545)
T ss_dssp HHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC---
T ss_pred HHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCcC
Confidence 77788888888888 8999999999987555445578888999999999999999 56554
No 120
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.80 E-value=2.9e-08 Score=96.08 Aligned_cols=100 Identities=16% Similarity=0.184 Sum_probs=78.5
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccC--------------------cc---------------------
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMA--------------------RL--------------------- 80 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~--------------------~~--------------------- 80 (358)
.+|+|||||++|+.+|..|++.|.+|+|+|+.+.+.. ..
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 84 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDFI 84 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHHH
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHHH
Confidence 4799999999999999999999999999998764310 00
Q ss_pred ----------------------CCHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcC---CCcEEEEEcCCCcEEecCeEEE
Q 018320 81 ----------------------FTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDS---NGKVVAVNLRDGNRLPTDMVVV 135 (358)
Q Consensus 81 ----------------------~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~---~g~v~~v~~~~g~~i~~D~vi~ 135 (358)
...++.+.+.+.+++.||++++++.++++..++ ++. ..+++.++ ++.+|.||+
T Consensus 85 ~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~-~~v~~~~g-~i~ad~VVl 162 (401)
T 2gqf_A 85 SLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVR-FVLQVNST-QWQCKNLIV 162 (401)
T ss_dssp HHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCC-EEEEETTE-EEEESEEEE
T ss_pred HHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCe-EEEEECCC-EEECCEEEE
Confidence 123455667778888999999999999998641 333 35666666 799999999
Q ss_pred eeCCCCCh
Q 018320 136 GIGIRPNT 143 (358)
Q Consensus 136 a~G~~p~~ 143 (358)
|+|..+..
T Consensus 163 AtG~~s~p 170 (401)
T 2gqf_A 163 ATGGLSMP 170 (401)
T ss_dssp CCCCSSCG
T ss_pred CCCCccCC
Confidence 99998854
No 121
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.79 E-value=1.7e-08 Score=94.34 Aligned_cols=99 Identities=12% Similarity=0.190 Sum_probs=76.7
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEee----CCcc------------cCc----cCCHHHHHHHHHHHHhCCCEEE
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFP----EAHC------------MAR----LFTPKIASYYEEYYKSKGVKFV 101 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~----~~~~------------l~~----~~~~~~~~~~~~~l~~~gV~v~ 101 (358)
.+|+|||||+.|+.+|..|++.|.+|+++++ ...+ .+. ....++...+.+.+++.|++++
T Consensus 9 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~ 88 (333)
T 1vdc_A 9 TRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGTTIF 88 (333)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCCEEE
Confidence 5899999999999999999999999999998 2211 111 0124677777888889999999
Q ss_pred cCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChh
Q 018320 102 KGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 102 ~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 144 (358)
.++ +++++.+++. ..+.+ +|.++.+|.||+|+|.+|...
T Consensus 89 ~~~-v~~i~~~~~~--~~v~~-~~~~~~~~~vv~A~G~~~~~~ 127 (333)
T 1vdc_A 89 TET-VTKVDFSSKP--FKLFT-DSKAILADAVILAIGAVAKRL 127 (333)
T ss_dssp CCC-CCEEECSSSS--EEEEC-SSEEEEEEEEEECCCEEECCC
T ss_pred EeE-EEEEEEcCCE--EEEEE-CCcEEEcCEEEECCCCCcCCC
Confidence 986 8898763332 34666 778899999999999887643
No 122
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.79 E-value=1.2e-08 Score=98.33 Aligned_cols=101 Identities=22% Similarity=0.311 Sum_probs=74.0
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCC--CcEEEEeeCCcccCccCCHHHH---------HHHHHHHHhCCCEEEcCCeeeEE
Q 018320 41 GGNAVVIGGGYIGMECAASLVINK--INVTMVFPEAHCMARLFTPKIA---------SYYEEYYKSKGVKFVKGTVLSSF 109 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g--~~Vtlv~~~~~~l~~~~~~~~~---------~~~~~~l~~~gV~v~~~~~v~~i 109 (358)
+|||||||||+.|+.+|..|++.+ .+||||++.+......+...+. ..-.+.+.++||+++.+ +|++|
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~gv~~i~~-~v~~i 80 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHGIQVVHD-SALGI 80 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTTCEEECS-CEEEE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCCCEEEEe-EEEEE
Confidence 799999999999999999998875 5899999887542211111111 00123456789999865 68899
Q ss_pred EEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChhhh
Q 018320 110 DVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLF 146 (358)
Q Consensus 110 ~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~ 146 (358)
+. ++. .+.+.+|+++++|.+++|+|.+++..-.
T Consensus 81 d~-~~~---~v~~~~g~~i~yd~LviAtG~~~~~~~i 113 (401)
T 3vrd_B 81 DP-DKK---LVKTAGGAEFAYDRCVVAPGIDLLYDKI 113 (401)
T ss_dssp ET-TTT---EEEETTSCEEECSEEEECCCEEECGGGS
T ss_pred Ec-cCc---EEEecccceeecceeeeccCCccccCCc
Confidence 75 222 4677899999999999999998876533
No 123
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.79 E-value=1.9e-08 Score=101.68 Aligned_cols=134 Identities=16% Similarity=0.159 Sum_probs=94.5
Q ss_pred CCCCCCCCCCeEEecCHHHHHHHHHHHhcC--CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCc--------
Q 018320 10 FGLSGSDAENVCYLRDLADANRLVNVMKSC--SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR-------- 79 (358)
Q Consensus 10 ~~ipG~~~~~v~~l~~~~da~~i~~~l~~~--~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~-------- 79 (358)
+++|+.+.+++..++...+...+...+... ..-+|+|||+|.+|+.+|..|++.|.+|+|+|+.+.+...
T Consensus 88 ~~~p~~~~~~~~~w~~~~~~~~i~~~i~~~~~~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~ 167 (566)
T 1qo8_A 88 KPMPFSDAKKKKSWDDGWDQDKIQKAIAAGPSETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGM 167 (566)
T ss_dssp CCCTTTTSCCCCCSCCCCCHHHHHHHHHTCCSEEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCE
T ss_pred CCCCCCCCCCCcccccccccHHHHHhhccCCCCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCcee
Confidence 557777666666666644455554444311 2247999999999999999999999999999987643210
Q ss_pred ------------------------------cC------------------------------------------------
Q 018320 80 ------------------------------LF------------------------------------------------ 81 (358)
Q Consensus 80 ------------------------------~~------------------------------------------------ 81 (358)
..
T Consensus 168 ~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~ 247 (566)
T 1qo8_A 168 NAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQNDIKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKS 247 (566)
T ss_dssp ECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSC
T ss_pred EccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCCHHHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCC
Confidence 00
Q ss_pred -CHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcC--CCc--EEecCeEEEeeCCCCCh
Q 018320 82 -TPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLR--DGN--RLPTDMVVVGIGIRPNT 143 (358)
Q Consensus 82 -~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~--~g~--~i~~D~vi~a~G~~p~~ 143 (358)
...+...+.+.+++.||++++++.|+++..++++++..+.+. +|+ ++.+|.||+|+|.....
T Consensus 248 ~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~~ 314 (566)
T 1qo8_A 248 SGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGMN 314 (566)
T ss_dssp HHHHHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTTC
T ss_pred CHHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcccC
Confidence 112345556667788999999999999987433777666554 675 68999999999976543
No 124
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.78 E-value=2.8e-08 Score=92.69 Aligned_cols=102 Identities=14% Similarity=0.139 Sum_probs=77.3
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCc-----------ccCcc----CCHHHHHHHHHHHHhCCCEEEcCCee
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAH-----------CMARL----FTPKIASYYEEYYKSKGVKFVKGTVL 106 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~-----------~l~~~----~~~~~~~~~~~~l~~~gV~v~~~~~v 106 (358)
.+++|||||+.|+.+|..|++.|.+|+++++... ..+.. ...++.+.+.+.+++.|++++. .++
T Consensus 9 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~-~~v 87 (325)
T 2q7v_A 9 YDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGMPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVEM-DEV 87 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEEE-CCE
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCCCCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEEe-eeE
Confidence 5799999999999999999999999999998721 01110 1246677778888899999997 588
Q ss_pred eEEEEcC-CCcEEEEEcCCCcEEecCeEEEeeCCCCChh
Q 018320 107 SSFDVDS-NGKVVAVNLRDGNRLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 107 ~~i~~~~-~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 144 (358)
++++.+. +.....+.+.+|+++.+|.+|+|+|.+|...
T Consensus 88 ~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~ 126 (325)
T 2q7v_A 88 QGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPRKL 126 (325)
T ss_dssp EEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEECCC
T ss_pred EEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcCCC
Confidence 8887641 2211234566788999999999999877643
No 125
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.78 E-value=1.9e-09 Score=105.29 Aligned_cols=96 Identities=21% Similarity=0.281 Sum_probs=71.6
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCC--CcEEEEeeCCcccCccCCHH----------HHHHHHHHHHhCCCEEEcCCeeeEE
Q 018320 42 GNAVVIGGGYIGMECAASLVINK--INVTMVFPEAHCMARLFTPK----------IASYYEEYYKSKGVKFVKGTVLSSF 109 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g--~~Vtlv~~~~~~l~~~~~~~----------~~~~~~~~l~~~gV~v~~~~~v~~i 109 (358)
|+|||||||+.|+.+|..|++++ .+||||++.++..-...-+. +...+.+.+++.||+++.+ +|++|
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~-~v~~I 81 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAESI 81 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEEE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEe-EEEEE
Confidence 78999999999999999999875 78999999876421101111 1111234566779999976 68999
Q ss_pred EEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCC
Q 018320 110 DVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPN 142 (358)
Q Consensus 110 ~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~ 142 (358)
+. ++. .|++.+|+++++|.+|+|+|.++.
T Consensus 82 d~-~~~---~V~~~~g~~i~YD~LViAtG~~~~ 110 (430)
T 3hyw_A 82 DP-DAN---TVTTQSGKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp ET-TTT---EEEETTCCEEECSEEEECCCCEEE
T ss_pred EC-CCC---EEEECCCCEEECCEEEEeCCCCcc
Confidence 75 222 477889999999999999998653
No 126
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.77 E-value=4.3e-08 Score=96.06 Aligned_cols=100 Identities=26% Similarity=0.357 Sum_probs=79.9
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCc------------------------------------cC----
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR------------------------------------LF---- 81 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~------------------------------------~~---- 81 (358)
.+|+|||||++|+.+|..|++.|.+|+|+|+.+.+... .+
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNNED 106 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCHHH
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCHHH
Confidence 57999999999999999999999999999987643100 00
Q ss_pred --------------------------CHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEE
Q 018320 82 --------------------------TPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVV 135 (358)
Q Consensus 82 --------------------------~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~ 135 (358)
...+.+.+.+.+++.||+++++++|+++.. +++.+..+++.+|+++.+|.||+
T Consensus 107 ~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~-~~~~v~~V~~~~G~~i~Ad~VVl 185 (447)
T 2i0z_A 107 IITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEY-ENGQTKAVILQTGEVLETNHVVI 185 (447)
T ss_dssp HHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTCCEEECSCEEE
T ss_pred HHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEe-cCCcEEEEEECCCCEEECCEEEE
Confidence 023445566777889999999999999986 45665678888888899999999
Q ss_pred eeCCCCC
Q 018320 136 GIGIRPN 142 (358)
Q Consensus 136 a~G~~p~ 142 (358)
|+|..+.
T Consensus 186 AtGg~s~ 192 (447)
T 2i0z_A 186 AVGGKSV 192 (447)
T ss_dssp CCCCSSS
T ss_pred CCCCCcC
Confidence 9998773
No 127
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.77 E-value=5.9e-08 Score=97.03 Aligned_cols=104 Identities=13% Similarity=0.186 Sum_probs=81.1
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCC--ccc-----------CccCCHHHHHHHHHHHHhCCCEEEcCCee
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEA--HCM-----------ARLFTPKIASYYEEYYKSKGVKFVKGTVL 106 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~--~~l-----------~~~~~~~~~~~~~~~l~~~gV~v~~~~~v 106 (358)
...+|+|||||+.|+.+|..|++.|.+|+++++.. .+. +....+++...+.+.+++.||+++.++++
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v~~~~~v 290 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVIDSQSA 290 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEEECSCCE
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEECCCCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEcCCEE
Confidence 34579999999999999999999999999997631 111 11123567788888889999999999999
Q ss_pred eEEEEcCC-CcEEEEEcCCCcEEecCeEEEeeCCCCCh
Q 018320 107 SSFDVDSN-GKVVAVNLRDGNRLPTDMVVVGIGIRPNT 143 (358)
Q Consensus 107 ~~i~~~~~-g~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 143 (358)
++++.+.+ +....+.+.+|.++.+|.||+|+|.+|..
T Consensus 291 ~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~~ 328 (521)
T 1hyu_A 291 SKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWRN 328 (521)
T ss_dssp EEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcCC
Confidence 99974221 22346778888899999999999987654
No 128
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.74 E-value=6.2e-09 Score=100.67 Aligned_cols=98 Identities=22% Similarity=0.333 Sum_probs=74.1
Q ss_pred CcEEEEcCcHHHHHHHHHHHh---CCCcEEEEeeCCcccCc----------cCCHHHHHHHHHHHHhCCCEEEcCCeeeE
Q 018320 42 GNAVVIGGGYIGMECAASLVI---NKINVTMVFPEAHCMAR----------LFTPKIASYYEEYYKSKGVKFVKGTVLSS 108 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~---~g~~Vtlv~~~~~~l~~----------~~~~~~~~~~~~~l~~~gV~v~~~~~v~~ 108 (358)
++|+|||||++|+++|..|++ .|.+|||+++.+.+... ....++...+.+.+++.|++++.+ ++++
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~ 80 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEG-TVEK 80 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEEC-EEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEe-eEEE
Confidence 589999999999999999999 89999999998754211 011233344566777889999987 8999
Q ss_pred EEEcCCCcEEEEEcCCCc----EEecCeEEEeeCCCCChh
Q 018320 109 FDVDSNGKVVAVNLRDGN----RLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 109 i~~~~~g~v~~v~~~~g~----~i~~D~vi~a~G~~p~~~ 144 (358)
++.+ +. .+.+.+++ ++.+|.||+|+|.+|+..
T Consensus 81 i~~~-~~---~V~~~~g~~~~~~~~~d~lViAtG~~~~~~ 116 (409)
T 3h8l_A 81 IDAK-SS---MVYYTKPDGSMAEEEYDYVIVGIGAHLATE 116 (409)
T ss_dssp EETT-TT---EEEEECTTSCEEEEECSEEEECCCCEECGG
T ss_pred EeCC-CC---EEEEccCCcccceeeCCEEEECCCCCcCcc
Confidence 9752 22 24445554 399999999999988865
No 129
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.74 E-value=4.4e-08 Score=94.28 Aligned_cols=101 Identities=17% Similarity=0.245 Sum_probs=75.9
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCc-----cCCHHHHHH---------------------------
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR-----LFTPKIASY--------------------------- 88 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~-----~~~~~~~~~--------------------------- 88 (358)
..+|+|||||++|+.+|..|++.|.+|+|+|+.+.+... .+.+...+.
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~ 84 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDALTGE 84 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETTTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecCCCC
Confidence 468999999999999999999999999999987654211 122322221
Q ss_pred ----------------HHHHHHh--CCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCCh
Q 018320 89 ----------------YEEYYKS--KGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNT 143 (358)
Q Consensus 89 ----------------~~~~l~~--~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 143 (358)
+.+.|.+ .|++++++++|++++.++++ ..+++.+|+++.+|.||.|.|..+..
T Consensus 85 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~--v~v~~~~g~~~~ad~vV~AdG~~S~v 155 (397)
T 2vou_A 85 RVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSET--VQMRFSDGTKAEANWVIGADGGASVV 155 (397)
T ss_dssp EEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSC--EEEEETTSCEEEESEEEECCCTTCHH
T ss_pred ccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCE--EEEEECCCCEEECCEEEECCCcchhH
Confidence 2222222 38999999999999875444 35788899999999999999987653
No 130
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.74 E-value=4.1e-08 Score=94.34 Aligned_cols=101 Identities=22% Similarity=0.176 Sum_probs=78.9
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccC-------------------------------------------
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMA------------------------------------------- 78 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~------------------------------------------- 78 (358)
.+|+|||||+.|+.+|..|++.|.+|+|+|+.+.+.+
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g~~ 86 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGEL 86 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETTEE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCCCE
Confidence 5799999999999999999999999999998754300
Q ss_pred --c-------------cC-CHHHHHHHHHHHHhC-CCEEEcCCeeeEEEEcCCCcEE-EEEcCCCcEEecCeEEEeeCCC
Q 018320 79 --R-------------LF-TPKIASYYEEYYKSK-GVKFVKGTVLSSFDVDSNGKVV-AVNLRDGNRLPTDMVVVGIGIR 140 (358)
Q Consensus 79 --~-------------~~-~~~~~~~~~~~l~~~-gV~v~~~~~v~~i~~~~~g~v~-~v~~~~g~~i~~D~vi~a~G~~ 140 (358)
. .+ ..++.+.+.+.+++. |++++++++|++++.++++ +. .+++.+|+++.+|.||.|+|..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~-v~g~v~~~~g~~~~ad~vV~AdG~~ 165 (399)
T 2x3n_A 87 LRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERH-AIDQVRLNDGRVLRPRVVVGADGIA 165 (399)
T ss_dssp EEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTS-CEEEEEETTSCEEEEEEEEECCCTT
T ss_pred EEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCc-eEEEEEECCCCEEECCEEEECCCCC
Confidence 0 00 124455666667776 9999999999999875444 32 5778889899999999999987
Q ss_pred CCh
Q 018320 141 PNT 143 (358)
Q Consensus 141 p~~ 143 (358)
+..
T Consensus 166 s~v 168 (399)
T 2x3n_A 166 SYV 168 (399)
T ss_dssp CHH
T ss_pred hHH
Confidence 653
No 131
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.74 E-value=4e-08 Score=91.13 Aligned_cols=98 Identities=12% Similarity=0.196 Sum_probs=75.8
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCc-----------ccCc----cCCHHHHHHHHHHHHhCCCEEEcCCee
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAH-----------CMAR----LFTPKIASYYEEYYKSKGVKFVKGTVL 106 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~-----------~l~~----~~~~~~~~~~~~~l~~~gV~v~~~~~v 106 (358)
.+|+|||||+.|+.+|..|++.|.+|+++++... ..+. ...+++.+.+.+.+++.|++++.++ +
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v 84 (320)
T 1trb_A 6 SKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDH-I 84 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCCEEECCSSTTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEECCC-E
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEccCCCCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEee-e
Confidence 5799999999999999999999999999996420 0111 1125677777888889999999986 8
Q ss_pred eEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCCh
Q 018320 107 SSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNT 143 (358)
Q Consensus 107 ~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 143 (358)
+.++.+ ++.+ .+ +.++.++.+|.+|+|+|.+|..
T Consensus 85 ~~i~~~-~~~~-~v-~~~~~~~~~~~lv~AtG~~~~~ 118 (320)
T 1trb_A 85 NKVDLQ-NRPF-RL-NGDNGEYTCDALIIATGASARY 118 (320)
T ss_dssp EEEECS-SSSE-EE-EESSCEEEEEEEEECCCEEECC
T ss_pred eEEEec-CCEE-EE-EeCCCEEEcCEEEECCCCCcCC
Confidence 888753 3332 33 5678899999999999987754
No 132
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.72 E-value=1.7e-09 Score=101.50 Aligned_cols=43 Identities=12% Similarity=0.273 Sum_probs=35.0
Q ss_pred HHHhcCCCCcEEEEcCcHHHHHHHHHHHh--CCCcEEEEeeCCcc
Q 018320 34 NVMKSCSGGNAVVIGGGYIGMECAASLVI--NKINVTMVFPEAHC 76 (358)
Q Consensus 34 ~~l~~~~~~~vvVIGgG~~gle~A~~L~~--~g~~Vtlv~~~~~~ 76 (358)
+.+.......|+|||||+.|+.+|..|++ .|.+|+|+|+.+.+
T Consensus 58 ~~~~~~~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~ 102 (326)
T 3fpz_A 58 KDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 102 (326)
T ss_dssp HHHHHTTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSC
T ss_pred hhhhhccCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCC
Confidence 33444455789999999999999999974 59999999997654
No 133
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.72 E-value=9.5e-09 Score=98.22 Aligned_cols=99 Identities=22% Similarity=0.366 Sum_probs=73.1
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccC----------ccCCH-HHHHHHHHHHHhCCCEEEcCCeeeE
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMA----------RLFTP-KIASYYEEYYKSKGVKFVKGTVLSS 108 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~----------~~~~~-~~~~~~~~~l~~~gV~v~~~~~v~~ 108 (358)
.+.+++|||||+.|+.+|..|++.| +|+|+++.+.+.. ...+. ++.....+.+++.||+++.+++++.
T Consensus 7 ~~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~g~~v~~ 85 (367)
T 1xhc_A 7 HGSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEIRLAEEAKL 85 (367)
T ss_dssp --CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHHHHHHTEEEECSCCEEE
T ss_pred CCCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHHHHhCCcEEEECCEEEE
Confidence 4789999999999999999999999 9999998865311 00111 1111234566778999999999999
Q ss_pred EEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChh
Q 018320 109 FDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 109 i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 144 (358)
++. +.. .+. .+|+++.+|.+|+|||.+|...
T Consensus 86 id~--~~~--~V~-~~g~~~~~d~lViATGs~p~~p 116 (367)
T 1xhc_A 86 IDR--GRK--VVI-TEKGEVPYDTLVLATGARAREP 116 (367)
T ss_dssp EET--TTT--EEE-ESSCEEECSEEEECCCEEECCC
T ss_pred EEC--CCC--EEE-ECCcEEECCEEEECCCCCCCCC
Confidence 975 232 344 5778999999999999888653
No 134
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.71 E-value=5.1e-08 Score=94.14 Aligned_cols=100 Identities=15% Similarity=0.182 Sum_probs=78.5
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCccc--------Cc----------------------------------
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM--------AR---------------------------------- 79 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l--------~~---------------------------------- 79 (358)
.+|+|||||++|+.+|..|++.|.+|+|+|+.+..- +.
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGKEIA 85 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETTEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCCeeE
Confidence 489999999999999999999999999999874210 00
Q ss_pred ----------------cCC-HHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCc--EEecCeEEEeeCCC
Q 018320 80 ----------------LFT-PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGN--RLPTDMVVVGIGIR 140 (358)
Q Consensus 80 ----------------~~~-~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~--~i~~D~vi~a~G~~ 140 (358)
.++ ..+...+.+.+++.|++++.+++|++++.++++....+.+.+|+ ++.+|.||.|+|..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~ 165 (421)
T 3nix_A 86 DFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYG 165 (421)
T ss_dssp EEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGG
T ss_pred EEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCc
Confidence 001 23455666777778999999999999987555555567778887 69999999999987
Q ss_pred C
Q 018320 141 P 141 (358)
Q Consensus 141 p 141 (358)
+
T Consensus 166 s 166 (421)
T 3nix_A 166 R 166 (421)
T ss_dssp C
T ss_pred h
Confidence 6
No 135
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.71 E-value=6.6e-08 Score=89.85 Aligned_cols=99 Identities=10% Similarity=0.155 Sum_probs=75.6
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCc-----------ccCc---cCCHHHHHHHHHHHHhCCCEEEcCCee
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAH-----------CMAR---LFTPKIASYYEEYYKSKGVKFVKGTVL 106 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~-----------~l~~---~~~~~~~~~~~~~l~~~gV~v~~~~~v 106 (358)
..+++|||||+.|+.+|..|++.|.+|+++++... ..+. ....++.+.+.+.+++.|++++. .++
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v 94 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAVAGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREG-VEV 94 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSTTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEET-CCE
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEE-eeE
Confidence 35899999999999999999999999999998521 0111 11246677777888889999998 688
Q ss_pred eEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCCh
Q 018320 107 SSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNT 143 (358)
Q Consensus 107 ~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 143 (358)
++++.+++ . ..+.+ ++.++.+|.+|+|+|..|..
T Consensus 95 ~~i~~~~~-~-~~v~~-~~~~~~~~~li~AtG~~~~~ 128 (319)
T 3cty_A 95 RSIKKTQG-G-FDIET-NDDTYHAKYVIITTGTTHKH 128 (319)
T ss_dssp EEEEEETT-E-EEEEE-SSSEEEEEEEEECCCEEECC
T ss_pred EEEEEeCC-E-EEEEE-CCCEEEeCEEEECCCCCccc
Confidence 88876333 2 23554 66789999999999987654
No 136
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.70 E-value=1.9e-08 Score=97.25 Aligned_cols=97 Identities=19% Similarity=0.374 Sum_probs=74.0
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCC--cEEEEeeCCccc------C-ccC-----CHHHHHHHHHHHHhCCCEEEcCCeee
Q 018320 42 GNAVVIGGGYIGMECAASLVINKI--NVTMVFPEAHCM------A-RLF-----TPKIASYYEEYYKSKGVKFVKGTVLS 107 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~--~Vtlv~~~~~~l------~-~~~-----~~~~~~~~~~~l~~~gV~v~~~~~v~ 107 (358)
++++|||||+.|+.+|..|++.|. +||++++.+.+. + ..+ ..++.....+.+.+.+|+++. ++++
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~-~~v~ 80 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQAIELIS-DRMV 80 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHHTTEEEEC-CCEE
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHhCCCEEEE-EEEE
Confidence 689999999999999999999998 899999976321 0 000 111112234567788999999 8999
Q ss_pred EEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCCh
Q 018320 108 SFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNT 143 (358)
Q Consensus 108 ~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 143 (358)
+++. +.+ .+.+.+|+++.+|.+++|+|.+|..
T Consensus 81 ~id~--~~~--~v~~~~g~~~~~d~lvlAtG~~p~~ 112 (404)
T 3fg2_P 81 SIDR--EGR--KLLLASGTAIEYGHLVLATGARNRM 112 (404)
T ss_dssp EEET--TTT--EEEESSSCEEECSEEEECCCEEECC
T ss_pred EEEC--CCC--EEEECCCCEEECCEEEEeeCCCccC
Confidence 9975 232 4677889999999999999987664
No 137
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.70 E-value=5.1e-08 Score=95.42 Aligned_cols=103 Identities=19% Similarity=0.194 Sum_probs=76.2
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCC--cEEEEeeCCcccCc-------------------------------------c
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKI--NVTMVFPEAHCMAR-------------------------------------L 80 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~--~Vtlv~~~~~~l~~-------------------------------------~ 80 (358)
..++|+|||||++|+.+|..|++.|. +|+++++.+.+... .
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~ 84 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPL 84 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCch
Confidence 35799999999999999999999999 99999987533100 0
Q ss_pred --------------C--------------CHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCC---Cc---
Q 018320 81 --------------F--------------TPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRD---GN--- 126 (358)
Q Consensus 81 --------------~--------------~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~---g~--- 126 (358)
+ ..++.+++.+..++.++.++++++|++++.++++ ..|++.+ |+
T Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~--~~V~~~~~~~G~~~~ 162 (447)
T 2gv8_A 85 YRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGS--WVVTYKGTKAGSPIS 162 (447)
T ss_dssp CTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTE--EEEEEEESSTTCCEE
T ss_pred hhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCe--EEEEEeecCCCCeeE
Confidence 0 0245566666666668889999999999864332 2344444 66
Q ss_pred EEecCeEEEeeCC--CCChh
Q 018320 127 RLPTDMVVVGIGI--RPNTS 144 (358)
Q Consensus 127 ~i~~D~vi~a~G~--~p~~~ 144 (358)
++.+|.||+|+|. .|+..
T Consensus 163 ~~~~d~VVvAtG~~s~p~~p 182 (447)
T 2gv8_A 163 KDIFDAVSICNGHYEVPYIP 182 (447)
T ss_dssp EEEESEEEECCCSSSSBCBC
T ss_pred EEEeCEEEECCCCCCCCCCC
Confidence 7999999999998 66543
No 138
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.70 E-value=4.8e-08 Score=90.09 Aligned_cols=99 Identities=13% Similarity=0.119 Sum_probs=75.0
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEE-EeeCCcc------------cCc----cCCHHHHHHHHHHHHhCCCEEEcC
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTM-VFPEAHC------------MAR----LFTPKIASYYEEYYKSKGVKFVKG 103 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtl-v~~~~~~------------l~~----~~~~~~~~~~~~~l~~~gV~v~~~ 103 (358)
.++|+|||||+.|+.+|..|++.|.+|++ +++. .+ .+. ....++...+.+.+++.|++++.+
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~-~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 82 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKG-MPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKHEMV 82 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSS-STTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEEECC
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC-CCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEEEEE
Confidence 46899999999999999999999999999 9973 21 111 012577888888889999999988
Q ss_pred CeeeEEEEcCC-CcEEEE-EcCCCcEEecCeEEEeeCCCCChh
Q 018320 104 TVLSSFDVDSN-GKVVAV-NLRDGNRLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 104 ~~v~~i~~~~~-g~v~~v-~~~~g~~i~~D~vi~a~G~~p~~~ 144 (358)
++.++ .+++ +. ..+ ...++ ++.+|.+|+|+|.+|+..
T Consensus 83 -~v~~i-~~~~~~~-~~v~~~~~~-~~~~d~lvlAtG~~~~~~ 121 (315)
T 3r9u_A 83 -GVEQI-LKNSDGS-FTIKLEGGK-TELAKAVIVCTGSAPKKA 121 (315)
T ss_dssp -CEEEE-EECTTSC-EEEEETTSC-EEEEEEEEECCCEEECCC
T ss_pred -EEEEE-ecCCCCc-EEEEEecCC-EEEeCEEEEeeCCCCCCC
Confidence 88888 5331 22 232 23344 899999999999877654
No 139
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.69 E-value=1.5e-07 Score=87.83 Aligned_cols=97 Identities=11% Similarity=0.079 Sum_probs=71.6
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCc-------------------cCCHHHHHHHHH-----------
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR-------------------LFTPKIASYYEE----------- 91 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~-------------------~~~~~~~~~~~~----------- 91 (358)
.+|+|||||++|+.+|..|++.|.+|+|+|+.+.+... ..++.+.+.+..
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAEWT 82 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEEC
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeeecc
Confidence 57999999999999999999999999999987643110 012333333222
Q ss_pred --------------------------------HHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEe-cCeEEEeeC
Q 018320 92 --------------------------------YYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLP-TDMVVVGIG 138 (358)
Q Consensus 92 --------------------------------~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~-~D~vi~a~G 138 (358)
.+. .|++++++++|++++.++++ ..+++.+|+.+. +|.||+|+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~g~~i~~~~~v~~i~~~~~~--~~v~~~~g~~~~~a~~vV~a~g 159 (336)
T 1yvv_A 83 PLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMR-GDMPVSFSCRITEVFRGEEH--WNLLDAEGQNHGPFSHVIIATP 159 (336)
T ss_dssp CCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHH-TTCCEECSCCEEEEEECSSC--EEEEETTSCEEEEESEEEECSC
T ss_pred ccceeccCcccccCCCCCccEEcCccHHHHHHHHH-ccCcEEecCEEEEEEEeCCE--EEEEeCCCcCccccCEEEEcCC
Confidence 222 38999999999999875554 357788887764 999999999
Q ss_pred CCC
Q 018320 139 IRP 141 (358)
Q Consensus 139 ~~p 141 (358)
...
T Consensus 160 ~~~ 162 (336)
T 1yvv_A 160 APQ 162 (336)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 140
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.69 E-value=6.5e-08 Score=89.46 Aligned_cols=100 Identities=14% Similarity=0.175 Sum_probs=75.4
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcc-------c---------Cc----cCCHHHHHHHHHHHHhCCCEEE
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHC-------M---------AR----LFTPKIASYYEEYYKSKGVKFV 101 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~-------l---------~~----~~~~~~~~~~~~~l~~~gV~v~ 101 (358)
..|+|||||+.|+.+|..|+++|.+|+++++.+.. + +. ...+++...+.+.+++.++++.
T Consensus 5 yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~~~~~ 84 (314)
T 4a5l_A 5 HDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTTII 84 (314)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcCcEEE
Confidence 47999999999999999999999999999986420 0 11 1125677778888899999988
Q ss_pred cCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChh
Q 018320 102 KGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 102 ~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 144 (358)
... +.....+.+. ..+.+.++.++.+|.+|+|||.+|...
T Consensus 85 ~~~-v~~~~~~~~~--~~~~~~~~~~~~~~~liiATG~~~~~~ 124 (314)
T 4a5l_A 85 TET-IDHVDFSTQP--FKLFTEEGKEVLTKSVIIATGATAKRM 124 (314)
T ss_dssp CCC-EEEEECSSSS--EEEEETTCCEEEEEEEEECCCEEECCC
T ss_pred EeE-EEEeecCCCc--eEEEECCCeEEEEeEEEEccccccccc
Confidence 654 5555432333 346667889999999999999877643
No 141
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.69 E-value=5.9e-08 Score=90.98 Aligned_cols=100 Identities=14% Similarity=0.158 Sum_probs=77.0
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCc---c--------cCc----cCCHHHHHHHHHHHHhCCCEEEcCCe
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAH---C--------MAR----LFTPKIASYYEEYYKSKGVKFVKGTV 105 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~---~--------l~~----~~~~~~~~~~~~~l~~~gV~v~~~~~ 105 (358)
..+++|||||+.|+.+|..|++.|.+|+++++... + .+. ...+++.+.+.+.+++.|++++.++
T Consensus 14 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~- 92 (335)
T 2a87_A 14 VRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTSFGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGADLRMED- 92 (335)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSSCSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHTTCEEECCC-
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHcCCEEEEee-
Confidence 46899999999999999999999999999996410 0 111 1125677777888888999999987
Q ss_pred eeEEEEcCCCcEEEE-EcCCCcEEecCeEEEeeCCCCChh
Q 018320 106 LSSFDVDSNGKVVAV-NLRDGNRLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 106 v~~i~~~~~g~v~~v-~~~~g~~i~~D~vi~a~G~~p~~~ 144 (358)
+++++. .+. ..+ .+.+|+++.+|.+|+|+|.+|...
T Consensus 93 v~~i~~-~~~--~~v~~~~~g~~~~~d~lviAtG~~~~~~ 129 (335)
T 2a87_A 93 VESVSL-HGP--LKSVVTADGQTHRARAVILAMGAAARYL 129 (335)
T ss_dssp EEEEEC-SSS--SEEEEETTSCEEEEEEEEECCCEEECCC
T ss_pred EEEEEe-CCc--EEEEEeCCCCEEEeCEEEECCCCCccCC
Confidence 888875 222 234 567888999999999999877543
No 142
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.69 E-value=5.8e-09 Score=101.69 Aligned_cols=98 Identities=19% Similarity=0.265 Sum_probs=73.9
Q ss_pred CcEEEEcCcHHHHHHHHHHHh--CCCcEEEEeeCCcccCccC----------CHHHHHHHHHHHHhCCCEEEcCCeeeEE
Q 018320 42 GNAVVIGGGYIGMECAASLVI--NKINVTMVFPEAHCMARLF----------TPKIASYYEEYYKSKGVKFVKGTVLSSF 109 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~--~g~~Vtlv~~~~~~l~~~~----------~~~~~~~~~~~l~~~gV~v~~~~~v~~i 109 (358)
++|+|||||+.|+++|..|++ .|.+|||+++.+.+..... ..++...+.+.+++.||+++.+ +++.+
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~i 81 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAESI 81 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEEEE-EEEEE
Confidence 689999999999999999999 7899999999886532110 1111122334566789999975 88898
Q ss_pred EEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChh
Q 018320 110 DVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 110 ~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 144 (358)
+. +.. .+.+.+++++.+|.+|+|+|.+|+..
T Consensus 82 d~--~~~--~v~~~~g~~i~~d~liiAtG~~~~~p 112 (430)
T 3h28_A 82 DP--DAN--TVTTQSGKKIEYDYLVIATGPKLVFG 112 (430)
T ss_dssp ET--TTT--EEEETTCCEEECSEEEECCCCEEECC
T ss_pred EC--CCC--EEEECCCcEEECCEEEEcCCcccccC
Confidence 75 222 46678888999999999999987654
No 143
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.69 E-value=5.3e-08 Score=94.34 Aligned_cols=99 Identities=21% Similarity=0.416 Sum_probs=74.8
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCc--EEEEeeCCcccCc--cCCHHHH---------HHHHHHHHhCCCEEEcCCeeeE
Q 018320 42 GNAVVIGGGYIGMECAASLVINKIN--VTMVFPEAHCMAR--LFTPKIA---------SYYEEYYKSKGVKFVKGTVLSS 108 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~--Vtlv~~~~~~l~~--~~~~~~~---------~~~~~~l~~~gV~v~~~~~v~~ 108 (358)
++++|||||+.|+.+|..|++.|.+ |+++++.+.+.-. .+..... ....+.+++.||+++.+++++.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 82 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPILAEADWYGEARIDMLTGPEVTA 82 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCBSSCTTHHHHTTCEEEESCCEEE
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCccccHHHhCCCCCHHHhcCCHHHHHHCCCEEEeCCEEEE
Confidence 5899999999999999999999987 9999988753110 0111110 1123456778999999999999
Q ss_pred EEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChh
Q 018320 109 FDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 109 i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 144 (358)
++. +.+ .+.+.+|+++.+|.+|+|+|.+|...
T Consensus 83 id~--~~~--~v~~~~g~~~~~d~lvlAtG~~p~~~ 114 (410)
T 3ef6_A 83 LDV--QTR--TISLDDGTTLSADAIVIATGSRARTM 114 (410)
T ss_dssp EET--TTT--EEEETTSCEEECSEEEECCCEEECCC
T ss_pred EEC--CCC--EEEECCCCEEECCEEEEccCCcccCC
Confidence 975 222 46778899999999999999887653
No 144
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.68 E-value=3.6e-08 Score=96.23 Aligned_cols=101 Identities=23% Similarity=0.355 Sum_probs=75.7
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCC--cEEEEeeCCccc------Cc-cCC-----HHHHHHHHHHHHhCCCEEEcCCee
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKI--NVTMVFPEAHCM------AR-LFT-----PKIASYYEEYYKSKGVKFVKGTVL 106 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~--~Vtlv~~~~~~l------~~-~~~-----~~~~~~~~~~l~~~gV~v~~~~~v 106 (358)
.++++|||||+.|+.+|..|++.|. +|+++++.+.+. .. .+. .++.....+.+++.||+++.++.|
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 83 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAAQNIQLLGGTQV 83 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHHTTEEEECSCCE
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHhCCCEEEeCCEE
Confidence 4689999999999999999999998 799999875421 00 010 011111235677889999999999
Q ss_pred eEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChhh
Q 018320 107 SSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSL 145 (358)
Q Consensus 107 ~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l 145 (358)
+.++. ++. .+.+.+|+++.+|.+|+|+|.+|....
T Consensus 84 ~~i~~-~~~---~v~~~~g~~~~~d~lviAtG~~p~~~~ 118 (431)
T 1q1r_A 84 TAINR-DRQ---QVILSDGRALDYDRLVLATGGRPRPLP 118 (431)
T ss_dssp EEEET-TTT---EEEETTSCEEECSEEEECCCEEECCCG
T ss_pred EEEEC-CCC---EEEECCCCEEECCEEEEcCCCCccCCC
Confidence 99975 222 466778889999999999999887643
No 145
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.67 E-value=3.6e-08 Score=96.70 Aligned_cols=101 Identities=15% Similarity=0.250 Sum_probs=73.8
Q ss_pred CcEEEEcCcHHHHHHHHHHHhC--CCcEEEEeeCCccc--C----ccCCH------HHHHHHHHHHHhCCCEEEcCCeee
Q 018320 42 GNAVVIGGGYIGMECAASLVIN--KINVTMVFPEAHCM--A----RLFTP------KIASYYEEYYKSKGVKFVKGTVLS 107 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~--g~~Vtlv~~~~~~l--~----~~~~~------~~~~~~~~~l~~~gV~v~~~~~v~ 107 (358)
++|+|||||+.|+.+|..|++. |.+|+++++.+.+. + ..+.. ++.....+.+++.|++++.+++|+
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~V~ 82 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQKIQLLLNREVV 82 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC----------------CCCCHHHHHHTTEEEECSCEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 5899999999999999999998 89999999987643 1 00111 111113466788999999999999
Q ss_pred EEEEcCCCcEEEEE-cCCCcEEecCeEEEeeCCCCChh
Q 018320 108 SFDVDSNGKVVAVN-LRDGNRLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 108 ~i~~~~~g~v~~v~-~~~g~~i~~D~vi~a~G~~p~~~ 144 (358)
+++. ++.. ..+. ..++.++.+|.+|+|+|.+|...
T Consensus 83 ~id~-~~~~-v~v~~~~~~~~~~~d~lviAtG~~p~~p 118 (452)
T 3oc4_A 83 AMDV-ENQL-IAWTRKEEQQWYSYDKLILATGASQFST 118 (452)
T ss_dssp EEET-TTTE-EEEEETTEEEEEECSEEEECCCCCBCCC
T ss_pred EEEC-CCCE-EEEEecCceEEEEcCEEEECCCcccCCC
Confidence 9985 3332 2332 23567899999999999988754
No 146
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.66 E-value=1.5e-07 Score=87.26 Aligned_cols=99 Identities=18% Similarity=0.174 Sum_probs=74.5
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCc---cc--------C---ccCCHHHHHHHHHHHHhCCCEEEcCCeee
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAH---CM--------A---RLFTPKIASYYEEYYKSKGVKFVKGTVLS 107 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~---~l--------~---~~~~~~~~~~~~~~l~~~gV~v~~~~~v~ 107 (358)
-.|+|||||+.|+.+|..|+++|.+|+|+++... ++ | ....+++.........+.++.+..+..+.
T Consensus 7 yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (312)
T 4gcm_A 7 FDIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQYGDIKS 86 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEEECCCCE
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCeeecccccCCcCCccccchHHHHHHHHHHHhhccccccceeeee
Confidence 4799999999999999999999999999997531 10 1 11235677777777888888888887766
Q ss_pred EEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChh
Q 018320 108 SFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 108 ~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 144 (358)
.... ... .+...+++++.+|.+|+|||.+|...
T Consensus 87 ~~~~-~~~---~~~~~~~~~~~~d~liiAtGs~~~~~ 119 (312)
T 4gcm_A 87 VEDK-GEY---KVINFGNKELTAKAVIIATGAEYKKI 119 (312)
T ss_dssp EEEC-SSC---EEEECSSCEEEEEEEEECCCEEECCC
T ss_pred eeee-ecc---eeeccCCeEEEeceeEEcccCccCcC
Confidence 6543 222 34456788999999999999887654
No 147
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.66 E-value=1.5e-07 Score=95.04 Aligned_cols=105 Identities=15% Similarity=0.151 Sum_probs=79.4
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCc--------------------------------------cCC-
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR--------------------------------------LFT- 82 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~--------------------------------------~~~- 82 (358)
.+|+|||+|.+|+.+|..|++.|.+|+|+|+.+.+... ..+
T Consensus 127 ~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~~ 206 (571)
T 1y0p_A 127 VDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNINDP 206 (571)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSCH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCCCH
Confidence 58999999999999999999999999999987643210 001
Q ss_pred ------------------------------------------------HHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCC
Q 018320 83 ------------------------------------------------PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSN 114 (358)
Q Consensus 83 ------------------------------------------------~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~ 114 (358)
..+...+.+.+++.||+++++++|+++..+++
T Consensus 207 ~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~ 286 (571)
T 1y0p_A 207 ALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDK 286 (571)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEECTT
T ss_pred HHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCC
Confidence 23445566667788999999999999987444
Q ss_pred CcEEEEEcC--CCc--EEecCeEEEeeCCCCC-hhhh
Q 018320 115 GKVVAVNLR--DGN--RLPTDMVVVGIGIRPN-TSLF 146 (358)
Q Consensus 115 g~v~~v~~~--~g~--~i~~D~vi~a~G~~p~-~~l~ 146 (358)
+++..+.+. +|+ ++.+|.||+|+|.... .+++
T Consensus 287 g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~n~~~~ 323 (571)
T 1y0p_A 287 GTVKGILVKGMYKGYYWVKADAVILATGGFAKNNERV 323 (571)
T ss_dssp SCEEEEEEEETTTEEEEEECSEEEECCCCCTTCHHHH
T ss_pred CeEEEEEEEeCCCcEEEEECCeEEEeCCCcccCHHHH
Confidence 776656554 565 6899999999997643 4443
No 148
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.65 E-value=4.2e-08 Score=99.44 Aligned_cols=104 Identities=15% Similarity=0.145 Sum_probs=76.0
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhC--CCcEEEEeeCCccc----------CccC-CH--HHHHHHHHHHHhCCCEEEcCC
Q 018320 40 SGGNAVVIGGGYIGMECAASLVIN--KINVTMVFPEAHCM----------ARLF-TP--KIASYYEEYYKSKGVKFVKGT 104 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~--g~~Vtlv~~~~~~l----------~~~~-~~--~~~~~~~~~l~~~gV~v~~~~ 104 (358)
..++|+|||||+.|+.+|..|++. |.+|+++++.+.+. ...+ +. .+...+....++.|+++++++
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~v~~~~ 114 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDIRVLS 114 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTTSSCCGGGGBSSCHHHHHHHTTCEEECSE
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCCCchhhcCcCCChHHhhccCHHHHHHhcCcEEEECC
Confidence 457999999999999999999998 89999999987631 1101 11 122334555668899999999
Q ss_pred eeeEEEEcCCCcEEEEEcCCCc--EEecCeEEEeeCCCCChh
Q 018320 105 VLSSFDVDSNGKVVAVNLRDGN--RLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 105 ~v~~i~~~~~g~v~~v~~~~g~--~i~~D~vi~a~G~~p~~~ 144 (358)
.|++++. ++..+....+.+|+ ++.+|.+|+|+|.+|...
T Consensus 115 ~V~~id~-~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p 155 (588)
T 3ics_A 115 EVVKINK-EEKTITIKNVTTNETYNEAYDVLILSPGAKPIVP 155 (588)
T ss_dssp EEEEEET-TTTEEEEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEEEEEC-CCCEEEEeecCCCCEEEEeCCEEEECCCCCCCCC
Confidence 9999985 33333222234566 789999999999887643
No 149
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.65 E-value=3.5e-08 Score=95.59 Aligned_cols=100 Identities=21% Similarity=0.326 Sum_probs=76.6
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCc--EEEEeeCCccc------C-ccC-----CHHHHHHHHHHHHhCCCEEEcCCee
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKIN--VTMVFPEAHCM------A-RLF-----TPKIASYYEEYYKSKGVKFVKGTVL 106 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~--Vtlv~~~~~~l------~-~~~-----~~~~~~~~~~~l~~~gV~v~~~~~v 106 (358)
.++|+|||||+.|+.+|..|++.|.+ |+++++.+.+. . ..+ ..++.....+.+++.||+++.++++
T Consensus 9 ~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~v 88 (415)
T 3lxd_A 9 RADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKAVEMKLGAEV 88 (415)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBSSCHHHHHHTTEEEEETCCE
T ss_pred CCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhccCCHHHHHHCCcEEEeCCEE
Confidence 46899999999999999999999987 99999876531 1 001 1112222346677899999999999
Q ss_pred eEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChh
Q 018320 107 SSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 107 ~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 144 (358)
++++. +.+ .+.+.+|+++.+|.+|+|+|.+|...
T Consensus 89 ~~id~--~~~--~v~~~~g~~~~~d~lvlAtG~~~~~~ 122 (415)
T 3lxd_A 89 VSLDP--AAH--TVKLGDGSAIEYGKLIWATGGDPRRL 122 (415)
T ss_dssp EEEET--TTT--EEEETTSCEEEEEEEEECCCEECCCC
T ss_pred EEEEC--CCC--EEEECCCCEEEeeEEEEccCCccCCC
Confidence 99975 232 46778899999999999999887654
No 150
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.62 E-value=6.4e-08 Score=95.40 Aligned_cols=102 Identities=23% Similarity=0.278 Sum_probs=64.3
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhC--CCcEEEEeeCCcc------cCccCC------HHH-------HHHHHHHHHhCCCE
Q 018320 41 GGNAVVIGGGYIGMECAASLVIN--KINVTMVFPEAHC------MARLFT------PKI-------ASYYEEYYKSKGVK 99 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~--g~~Vtlv~~~~~~------l~~~~~------~~~-------~~~~~~~l~~~gV~ 99 (358)
.++|+|||||+.|+.+|..|++. |.+|+|+++.+.+ ++..+. .++ ........++.|++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 82 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINKDVE 82 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-------------------------------------------CE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhhcCcE
Confidence 36899999999999999999998 9999999998764 111111 111 11222222357999
Q ss_pred EEcCCeeeEEEEcCCCcEEEEE-cCCCc--EEecCeEEEeeCCCCChh
Q 018320 100 FVKGTVLSSFDVDSNGKVVAVN-LRDGN--RLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 100 v~~~~~v~~i~~~~~g~v~~v~-~~~g~--~i~~D~vi~a~G~~p~~~ 144 (358)
++.++++++++. ++..+ .+. +.+|+ ++.+|.+|+|+|.+|...
T Consensus 83 ~~~~~~V~~id~-~~~~v-~~~~~~~g~~~~~~~d~lviAtG~~p~~p 128 (472)
T 3iwa_A 83 ALVETRAHAIDR-AAHTV-EIENLRTGERRTLKYDKLVLALGSKANRP 128 (472)
T ss_dssp EECSEEEEEEET-TTTEE-EEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEECCEEEEEEC-CCCEE-EEeecCCCCEEEEECCEEEEeCCCCcCCC
Confidence 999999999985 33333 333 33465 799999999999877643
No 151
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.62 E-value=6.6e-08 Score=94.70 Aligned_cols=100 Identities=22% Similarity=0.308 Sum_probs=70.9
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhC--CCcEEEEeeCCccc------CccC-----CHHHHHHHHHHH-HhCCCEEEcCCee
Q 018320 41 GGNAVVIGGGYIGMECAASLVIN--KINVTMVFPEAHCM------ARLF-----TPKIASYYEEYY-KSKGVKFVKGTVL 106 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~--g~~Vtlv~~~~~~l------~~~~-----~~~~~~~~~~~l-~~~gV~v~~~~~v 106 (358)
.++|+|||||+.|+.+|..|++. |.+|+++++.+.+. +..+ ..++.....+.+ ++.||++++++++
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~v 82 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKKRGIDLHLNAEV 82 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC------------------------CTHHHHTTCEEETTCEE
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHhcCcEEEecCEE
Confidence 46899999999999999999998 78999999987531 1111 011112222334 6789999999999
Q ss_pred eEEEEcCCCcEEEEEcCCC-cEEecCeEEEeeCCCCChh
Q 018320 107 SSFDVDSNGKVVAVNLRDG-NRLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 107 ~~i~~~~~g~v~~v~~~~g-~~i~~D~vi~a~G~~p~~~ 144 (358)
++++. +. ..+.+.++ .++.+|.+|+|||.+|...
T Consensus 83 ~~i~~--~~--~~v~~~~g~~~~~~d~lviAtG~~p~~p 117 (449)
T 3kd9_A 83 IEVDT--GY--VRVRENGGEKSYEWDYLVFANGASPQVP 117 (449)
T ss_dssp EEECS--SE--EEEECSSSEEEEECSEEEECCCEEECCC
T ss_pred EEEec--CC--CEEEECCceEEEEcCEEEECCCCCCCCC
Confidence 99853 22 34666666 4899999999999887643
No 152
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.61 E-value=1.4e-07 Score=90.36 Aligned_cols=101 Identities=18% Similarity=0.178 Sum_probs=76.5
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcc------cCcc-----------------------------------
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHC------MARL----------------------------------- 80 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~------l~~~----------------------------------- 80 (358)
.+|+|||||++|+.+|..|++.|.+|+|+|+.+.. ....
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 82 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAGQ 82 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETTE
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECCc
Confidence 47999999999999999999999999999987641 0000
Q ss_pred -----------------CC-HHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEc-CCCc--EEecCeEEEeeCC
Q 018320 81 -----------------FT-PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNL-RDGN--RLPTDMVVVGIGI 139 (358)
Q Consensus 81 -----------------~~-~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~-~~g~--~i~~D~vi~a~G~ 139 (358)
++ .++.+.+.+.+.+.|++++.+++|++++.++++.+ .+++ .+|+ ++.+|.||.|.|.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~-~v~~~~~g~~~~~~a~~vV~AdG~ 161 (394)
T 1k0i_A 83 RRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERP-YVTFERDGERLRLDCDYIAGCDGF 161 (394)
T ss_dssp EEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSC-EEEEEETTEEEEEECSEEEECCCT
T ss_pred eEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCce-EEEEecCCcEEEEEeCEEEECCCC
Confidence 01 23445566667778999999999999986433322 4555 6786 7999999999998
Q ss_pred CCCh
Q 018320 140 RPNT 143 (358)
Q Consensus 140 ~p~~ 143 (358)
.+..
T Consensus 162 ~S~v 165 (394)
T 1k0i_A 162 HGIS 165 (394)
T ss_dssp TCST
T ss_pred CcHH
Confidence 7764
No 153
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.60 E-value=7.8e-08 Score=94.31 Aligned_cols=102 Identities=16% Similarity=0.130 Sum_probs=75.6
Q ss_pred cEEEEcCcHHHHHHHHHHHhCC-----CcEEEEeeCCcccC-------c-------------------------------
Q 018320 43 NAVVIGGGYIGMECAASLVINK-----INVTMVFPEAHCMA-------R------------------------------- 79 (358)
Q Consensus 43 ~vvVIGgG~~gle~A~~L~~~g-----~~Vtlv~~~~~~l~-------~------------------------------- 79 (358)
+|+|||||+.|+.+|..|++.| .+|+++|+.+.+.- .
T Consensus 32 dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~~~~ 111 (463)
T 3s5w_A 32 DLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLHKHD 111 (463)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHHHTT
T ss_pred CEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhhhcC
Confidence 7999999999999999999999 99999998874210 0
Q ss_pred ----------c--CCHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCC-CcE--EEEEcCCCc----EEecCeEEEeeCCC
Q 018320 80 ----------L--FTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSN-GKV--VAVNLRDGN----RLPTDMVVVGIGIR 140 (358)
Q Consensus 80 ----------~--~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~-g~v--~~v~~~~g~----~i~~D~vi~a~G~~ 140 (358)
. ...++.+++....++.+++++++++|++++.+++ +.. ..+.+.+|. ++.+|.||+|+|..
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~~ 191 (463)
T 3s5w_A 112 RLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGGT 191 (463)
T ss_dssp CHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCCE
T ss_pred ceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCCC
Confidence 0 0133445555555667899999999999986321 322 256666665 89999999999988
Q ss_pred CChh
Q 018320 141 PNTS 144 (358)
Q Consensus 141 p~~~ 144 (358)
|...
T Consensus 192 p~~p 195 (463)
T 3s5w_A 192 PRIP 195 (463)
T ss_dssp ECCC
T ss_pred CCCc
Confidence 7643
No 154
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.60 E-value=2.1e-07 Score=88.58 Aligned_cols=56 Identities=18% Similarity=0.230 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCC
Q 018320 84 KIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPN 142 (358)
Q Consensus 84 ~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~ 142 (358)
.+...+.+.+++.|++++.+++|++++.+ ++.+ .+.+.+| ++.+|.||+|+|..+.
T Consensus 165 ~~~~~l~~~~~~~g~~i~~~~~v~~i~~~-~~~~-~v~~~~g-~~~a~~vV~A~G~~s~ 220 (382)
T 1ryi_A 165 FVCKAYVKAAKMLGAEIFEHTPVLHVERD-GEAL-FIKTPSG-DVWANHVVVASGVWSG 220 (382)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCCCEEECS-SSSE-EEEETTE-EEEEEEEEECCGGGTH
T ss_pred HHHHHHHHHHHHCCCEEEcCCcEEEEEEE-CCEE-EEEcCCc-eEEcCEEEECCChhHH
Confidence 35566677788899999999999999863 4444 5677666 8999999999998643
No 155
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.59 E-value=3e-07 Score=86.52 Aligned_cols=56 Identities=18% Similarity=0.263 Sum_probs=43.3
Q ss_pred HHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCC--cEEecCeEEEeeCCCC
Q 018320 85 IASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDG--NRLPTDMVVVGIGIRP 141 (358)
Q Consensus 85 ~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g--~~i~~D~vi~a~G~~p 141 (358)
+...+.+.+++.|++++++++|++++.++++.+ .+.+.+| .++.+|.||+|+|...
T Consensus 152 ~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 152 LMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGF-ELDFGGAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEECTTSSE-EEEECTTSCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHCCCEEECCCEEEEEEEcCCceE-EEEECCCceeEEEeCEEEECCCcch
Confidence 334456677788999999999999987544433 4677777 4899999999999763
No 156
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.58 E-value=3.8e-07 Score=87.18 Aligned_cols=100 Identities=17% Similarity=0.164 Sum_probs=74.0
Q ss_pred cEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCc------cCCHHHH------------------------------
Q 018320 43 NAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR------LFTPKIA------------------------------ 86 (358)
Q Consensus 43 ~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~------~~~~~~~------------------------------ 86 (358)
||+|||||+.|+-+|..|++.|.+|+|+|+.+.+... .+.+...
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~~ 82 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFYN 82 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEEC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEec
Confidence 7999999999999999999999999999987654221 0111110
Q ss_pred -----------------------------HHHHHHHHh-CCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEe
Q 018320 87 -----------------------------SYYEEYYKS-KGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVG 136 (358)
Q Consensus 87 -----------------------------~~~~~~l~~-~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a 136 (358)
..+.+.|.+ .+.++++++++++++.++++.+ .+++.||+++.+|+||-|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~v~~~~~v~~~~~~~~~~v-~v~~~dG~~~~adlvVgA 161 (412)
T 4hb9_A 83 ERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGLANTIQWNKTFVRYEHIENGGI-KIFFADGSHENVDVLVGA 161 (412)
T ss_dssp TTSCEEEC--------------CEEEEEHHHHHHHHHTTCTTTEECSCCEEEEEECTTSCE-EEEETTSCEEEESEEEEC
T ss_pred CCcceecccCCccccccccccccceEeeHHHHHHHHHhhccceEEEEEEEEeeeEcCCCeE-EEEECCCCEEEeeEEEEC
Confidence 112233322 3456888999999987666654 688999999999999999
Q ss_pred eCCCCCh
Q 018320 137 IGIRPNT 143 (358)
Q Consensus 137 ~G~~p~~ 143 (358)
-|.++..
T Consensus 162 DG~~S~v 168 (412)
T 4hb9_A 162 DGSNSKV 168 (412)
T ss_dssp CCTTCHH
T ss_pred CCCCcch
Confidence 9987643
No 157
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.58 E-value=2e-07 Score=87.37 Aligned_cols=165 Identities=16% Similarity=0.146 Sum_probs=103.2
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhC--CCcEEEEeeCCcccCcc-------------------------------------C
Q 018320 41 GGNAVVIGGGYIGMECAASLVIN--KINVTMVFPEAHCMARL-------------------------------------F 81 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~--g~~Vtlv~~~~~~l~~~-------------------------------------~ 81 (358)
..+|+|||||+.|+.+|..|++. |.+|+|+++.+.+.... .
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~g~~~~~~~ 144 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKH 144 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEECSSEEEESC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccccCCCeEEEcc
Confidence 34899999999999999999998 99999999865442100 0
Q ss_pred CHHHHHHHHHHHHh-CCCEEEcCCeeeEEEEcC--C-C--cEEEEEcC--------------CCcEEec-----------
Q 018320 82 TPKIASYYEEYYKS-KGVKFVKGTVLSSFDVDS--N-G--KVVAVNLR--------------DGNRLPT----------- 130 (358)
Q Consensus 82 ~~~~~~~~~~~l~~-~gV~v~~~~~v~~i~~~~--~-g--~v~~v~~~--------------~g~~i~~----------- 130 (358)
..++...+.+.+.+ .||+++.++.++++..++ + + ++..+... ++.++.+
T Consensus 145 ~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~ 224 (326)
T 2gjc_A 145 AALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDL 224 (326)
T ss_dssp HHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCS
T ss_pred hHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeeccccccccc
Confidence 13344555666666 499999999999997643 3 4 66666542 3457899
Q ss_pred ----CeEEEeeCCCCCh-hhhhc-cccc-ccC-------------c-EEEecccc-CCCCcEEEEcccccccccccCccc
Q 018320 131 ----DMVVVGIGIRPNT-SLFEG-QLTL-EKG-------------G-IKVTGRLQ-SSNSSVYAVGDVAAFPLKLLGETR 188 (358)
Q Consensus 131 ----D~vi~a~G~~p~~-~l~~~-~~~~-~~g-------------~-i~vd~~~~-t~~~~VyAiGD~~~~~~~~~g~~~ 188 (358)
+.||.|+|..... .++.. ...+ ..+ . ..|+..-. +-.|++|++|-.+..-. |.++
T Consensus 225 ~~~~~~VV~ATG~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~~~---~~~r 301 (326)
T 2gjc_A 225 SQKHGVILSTTGHDGPFGAFCAKRIVDIDQNQKLGGMKGLDMNHAEHDVVIHSGAYAGVDNMYFAGMEVAELD---GLNR 301 (326)
T ss_dssp STTCCEEEECCCCC--CCSHHHHHHHHHHSSCCCCCCCCBCHHHHHHHHHHHCEECTTSTTEEECTHHHHHHH---TCCB
T ss_pred cccCCEEEECcCCCchHHHHHHhhccccccccccCceeccccccchhheeecCCCccccCCEEECChHHHHhc---CCCC
Confidence 9999999976443 23221 1110 000 0 11111112 15799999999875422 3333
Q ss_pred ccccHHHHHHHHHHHHHHHc
Q 018320 189 RLEHVDSARKSAKHAVAAIM 208 (358)
Q Consensus 189 ~~~~~~~A~~~g~~aa~~i~ 208 (358)
.-+....-...|+.||+.|+
T Consensus 302 ~g~~fg~m~~sg~~~a~~~~ 321 (326)
T 2gjc_A 302 MGPTFGAMALSGVHAAEQIL 321 (326)
T ss_dssp CCSCCHHHHHHHHHHHHHHH
T ss_pred CChhhhhhhhhhHHHHHHHH
Confidence 33333334457888887765
No 158
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.57 E-value=3.8e-07 Score=91.59 Aligned_cols=98 Identities=16% Similarity=0.238 Sum_probs=75.5
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCccc--------Cc------------cCC----------------HHH
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM--------AR------------LFT----------------PKI 85 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l--------~~------------~~~----------------~~~ 85 (358)
.+|+|||||+.|+.+|..|++.|.+|+|+|+.+.+. |. .+. +++
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~~i 96 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPEI 96 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHHHH
Confidence 479999999999999999999999999999875431 10 011 334
Q ss_pred HHHHHHHHHhCC--CEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCC
Q 018320 86 ASYYEEYYKSKG--VKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGI 139 (358)
Q Consensus 86 ~~~~~~~l~~~g--V~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~ 139 (358)
.+++....++.+ ++++++++|++++.++++....|++.+|+++.+|.||+|+|.
T Consensus 97 ~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~ 152 (542)
T 1w4x_A 97 LRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQ 152 (542)
T ss_dssp HHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCS
T ss_pred HHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCC
Confidence 555555556655 679999999999875544445677888989999999999995
No 159
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.57 E-value=2.7e-07 Score=90.45 Aligned_cols=101 Identities=18% Similarity=0.204 Sum_probs=77.4
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccC--c----------------------------------------
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMA--R---------------------------------------- 79 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~--~---------------------------------------- 79 (358)
.+|+|||||++|+.+|..|++.|.+|+|+|+.+.+.. .
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQT 86 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCce
Confidence 4799999999999999999999999999998764210 0
Q ss_pred ---------cCC-HHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcC---CCc--EEecCeEEEeeCCCCCh
Q 018320 80 ---------LFT-PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLR---DGN--RLPTDMVVVGIGIRPNT 143 (358)
Q Consensus 80 ---------~~~-~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~---~g~--~i~~D~vi~a~G~~p~~ 143 (358)
.++ .++.+.+.+.+.+.|++++.+++|+++.. +++.+..+++. +|+ ++.+|.||.|+|..+..
T Consensus 87 ~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~-~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~v 164 (453)
T 3atr_A 87 VWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIF-EDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSF 164 (453)
T ss_dssp EEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEE-ETTEEEEEEEEETTTTEEEEEECSEEEECCGGGCTT
T ss_pred EEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEE-ECCEEEEEEEEEcCCCceEEEEcCEEEECcCCchhh
Confidence 000 23556667777788999999999999986 34555445443 675 79999999999987654
No 160
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.56 E-value=3.5e-07 Score=87.60 Aligned_cols=55 Identities=16% Similarity=0.216 Sum_probs=43.8
Q ss_pred HHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCC
Q 018320 85 IASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRP 141 (358)
Q Consensus 85 ~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p 141 (358)
+...+.+.+++.|++++.+++|++++. +++.+..+++.+| ++.+|.||+|+|...
T Consensus 176 ~~~~l~~~~~~~g~~i~~~~~v~~i~~-~~~~~~~v~~~~g-~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 176 VAWAFARKANEMGVDIIQNCEVTGFIK-DGEKVTGVKTTRG-TIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEE-SSSBEEEEEETTC-CEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHCCCEEEcCCeEEEEEE-eCCEEEEEEeCCc-eEECCEEEECCchhH
Confidence 344456667788999999999999987 3555666777777 799999999999764
No 161
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.56 E-value=3.3e-07 Score=93.19 Aligned_cols=99 Identities=15% Similarity=0.160 Sum_probs=76.9
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCc-cc-----------------------Cc------------------
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAH-CM-----------------------AR------------------ 79 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~-~l-----------------------~~------------------ 79 (358)
-+|+|||||.+|+++|..|++.|.+|+|+++.+. +. ..
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l~~ 108 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILNA 108 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEEST
T ss_pred CCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhhhc
Confidence 4799999999999999999999999999998631 10 00
Q ss_pred -----------cCC-HHHHHHHHHHHHh-CCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCC
Q 018320 80 -----------LFT-PKIASYYEEYYKS-KGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPN 142 (358)
Q Consensus 80 -----------~~~-~~~~~~~~~~l~~-~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~ 142 (358)
.+| ..+...+.+.+++ .|++++ ++.|+.+.. +++.+..|.+.+|.++.+|.||+|+|..+.
T Consensus 109 ~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~-e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 109 SKGPAVRATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIV-ENDRVVGAVTQMGLKFRAKAVVLTVGTFLD 182 (651)
T ss_dssp TSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEE-SSSBEEEEEETTSEEEEEEEEEECCSTTTC
T ss_pred ccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEe-cCCEEEEEEECCCCEEECCEEEEcCCCCcc
Confidence 011 1345566677777 699995 678999976 456777788888988999999999998764
No 162
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.55 E-value=4.6e-07 Score=91.61 Aligned_cols=120 Identities=18% Similarity=0.164 Sum_probs=86.0
Q ss_pred HHHHHHHHHHhcC--CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCcc------------------------
Q 018320 27 ADANRLVNVMKSC--SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARL------------------------ 80 (358)
Q Consensus 27 ~da~~i~~~l~~~--~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~------------------------ 80 (358)
.|...++..+... ...+|+|||+|+.|+.+|..|++.|.+|+++++.+.+....
T Consensus 110 ~~~~~~~~~~~~~~~~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~ 189 (572)
T 1d4d_A 110 ADKAAQDKAIAAGVKETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKK 189 (572)
T ss_dssp SSHHHHHHHHHSCCCEECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCT
T ss_pred ccHHHHHHHhhccCCCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCH
Confidence 4566666666531 24589999999999999999999999999999875432100
Q ss_pred --------------C-------------------------------------------------CHHHHHHHHHHHHhCC
Q 018320 81 --------------F-------------------------------------------------TPKIASYYEEYYKSKG 97 (358)
Q Consensus 81 --------------~-------------------------------------------------~~~~~~~~~~~l~~~g 97 (358)
. ...+...+.+.+++.|
T Consensus 190 ~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~g 269 (572)
T 1d4d_A 190 QIMIDDTMKGGRNINDPELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRG 269 (572)
T ss_dssp HHHHHHHHHHTTTCSCHHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCCHHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcC
Confidence 0 1133455566677889
Q ss_pred CEEEcCCeeeEEEEcCCCcEEEEEcC--CCc--EEecCeEEEeeCCCCC-hhhh
Q 018320 98 VKFVKGTVLSSFDVDSNGKVVAVNLR--DGN--RLPTDMVVVGIGIRPN-TSLF 146 (358)
Q Consensus 98 V~v~~~~~v~~i~~~~~g~v~~v~~~--~g~--~i~~D~vi~a~G~~p~-~~l~ 146 (358)
|++++++.++++..++++++..+.+. +|+ ++.+|.||+|+|..+. .+++
T Consensus 270 v~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~ 323 (572)
T 1d4d_A 270 TDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAKNNERV 323 (572)
T ss_dssp CEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCTTCHHHH
T ss_pred CeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCccCHHHH
Confidence 99999999999976332676666554 564 6899999999997764 3444
No 163
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.55 E-value=9.2e-08 Score=96.30 Aligned_cols=102 Identities=17% Similarity=0.119 Sum_probs=71.5
Q ss_pred CcEEEEcCcHHHHHHHHHHHhC--CCcEEEEeeCCcccCc----------cC-CH--HHHHHHHHHHHhCCCEEEcCCee
Q 018320 42 GNAVVIGGGYIGMECAASLVIN--KINVTMVFPEAHCMAR----------LF-TP--KIASYYEEYYKSKGVKFVKGTVL 106 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~--g~~Vtlv~~~~~~l~~----------~~-~~--~~~~~~~~~l~~~gV~v~~~~~v 106 (358)
++|+|||||+.|+.+|..|++. +.+|+++++.+.+.-. .. ++ .+........++.|++++++++|
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V 81 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKARFNVEVRVKHEV 81 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHHHHHHCCEEETTEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHHHHhcCcEEEECCEE
Confidence 5899999999999999999998 8899999998764210 00 00 01112233344579999999999
Q ss_pred eEEEEcCCCcEEEEEcCCCc--EEecCeEEEeeCCCCChh
Q 018320 107 SSFDVDSNGKVVAVNLRDGN--RLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 107 ~~i~~~~~g~v~~v~~~~g~--~i~~D~vi~a~G~~p~~~ 144 (358)
++++. +...+....+.+|+ ++.+|.+|+|||.+|...
T Consensus 82 ~~id~-~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p 120 (565)
T 3ntd_A 82 VAIDR-AAKLVTVRRLLDGSEYQESYDTLLLSPGAAPIVP 120 (565)
T ss_dssp EEEET-TTTEEEEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEEEC-CCCEEEEEecCCCCeEEEECCEEEECCCCCCCCC
Confidence 99985 33333222233454 789999999999887653
No 164
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.55 E-value=3.1e-07 Score=87.68 Aligned_cols=99 Identities=16% Similarity=0.188 Sum_probs=75.9
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccC--------------------c----------------------
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMA--------------------R---------------------- 79 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~--------------------~---------------------- 79 (358)
.+|+|||||++|+.+|..|++.|.+|+|+|+.+.+.. .
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRPI 84 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSCE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCCEEE
Confidence 4799999999999999999999999999998753210 0
Q ss_pred cCC--------------HHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEc---CCCcEEecCeEEEeeCCCC
Q 018320 80 LFT--------------PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNL---RDGNRLPTDMVVVGIGIRP 141 (358)
Q Consensus 80 ~~~--------------~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~---~~g~~i~~D~vi~a~G~~p 141 (358)
.++ ..+...+.+.+++.|++++.+++|++++.+ ++.+..|.+ .++.++.+|.||.|+|..+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 85 ILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKE-NGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp EEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred EEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEe-CCEEEEEEEEECCeEEEEEcCEEEECCCcch
Confidence 001 123456667777789999999999999874 555544555 3556899999999999876
No 165
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.54 E-value=5.8e-07 Score=85.51 Aligned_cols=53 Identities=21% Similarity=0.300 Sum_probs=42.2
Q ss_pred HHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCC
Q 018320 87 SYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRP 141 (358)
Q Consensus 87 ~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p 141 (358)
..+.+.+++.|++++.+++|++++.+ ++.+..+++.+| ++.+|.||+|+|..+
T Consensus 153 ~~l~~~~~~~Gv~i~~~~~v~~i~~~-~~~v~gv~~~~g-~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 153 TAFAVKAKEYGAKLLEYTEVKGFLIE-NNEIKGVKTNKG-IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHCCCEEECCceEEEEEEE-CCEEEEEEECCc-EEECCEEEECcchhH
Confidence 33556677889999999999999873 455555777777 899999999999764
No 166
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.54 E-value=4.3e-07 Score=87.27 Aligned_cols=102 Identities=18% Similarity=0.242 Sum_probs=73.3
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCcc------CCH----H----------H--------------
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARL------FTP----K----------I-------------- 85 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~------~~~----~----------~-------------- 85 (358)
...+|+|||||++|+.+|..|++.|.+|+|+|+.+.+..+. +.+ + +
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~ 104 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIADE 104 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEECS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEECC
Confidence 35689999999999999999999999999999876432110 000 0 0
Q ss_pred ----------------------HHHHHHHHHh--CCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCC
Q 018320 86 ----------------------ASYYEEYYKS--KGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRP 141 (358)
Q Consensus 86 ----------------------~~~~~~~l~~--~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p 141 (358)
...+.+.|.+ .+++++++++|++++.++++ ..+++.+|+++.+|.||.|.|..+
T Consensus 105 ~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~--v~v~~~~g~~~~ad~vV~AdG~~S 182 (398)
T 2xdo_A 105 KGNILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKK--WTLTFENKPSETADLVILANGGMS 182 (398)
T ss_dssp SSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSS--EEEEETTSCCEEESEEEECSCTTC
T ss_pred CCCchhhccccccCCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCE--EEEEECCCcEEecCEEEECCCcch
Confidence 0112222322 13678999999999875443 357888998999999999999876
Q ss_pred Ch
Q 018320 142 NT 143 (358)
Q Consensus 142 ~~ 143 (358)
..
T Consensus 183 ~v 184 (398)
T 2xdo_A 183 KV 184 (398)
T ss_dssp SC
T ss_pred hH
Confidence 53
No 167
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.53 E-value=4.9e-07 Score=91.69 Aligned_cols=100 Identities=24% Similarity=0.241 Sum_probs=77.4
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCc-cc-----------------------Cc------------------
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAH-CM-----------------------AR------------------ 79 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~-~l-----------------------~~------------------ 79 (358)
-+|+|||||..|+++|..+++.|.+|+|+++.+. +. ..
T Consensus 28 yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l~~ 107 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKMLNT 107 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEEST
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeeccc
Confidence 5799999999999999999999999999998631 10 00
Q ss_pred -----------cCC-HHHHHHHHHHHHh-CCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCCh
Q 018320 80 -----------LFT-PKIASYYEEYYKS-KGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNT 143 (358)
Q Consensus 80 -----------~~~-~~~~~~~~~~l~~-~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 143 (358)
..| ..+...+.+.+++ .||+++ +..|+++.. +++.+..|.+.+|.++.+|.||+|+|..++.
T Consensus 108 ~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~-e~g~V~GV~t~dG~~i~AdaVVLATG~~s~~ 182 (637)
T 2zxi_A 108 RKGKAVQSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIV-KNNQVVGVRTNLGVEYKTKAVVVTTGTFLNG 182 (637)
T ss_dssp TSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEE-SSSBEEEEEETTSCEEECSEEEECCTTCBTC
T ss_pred ccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEe-cCCEEEEEEECCCcEEEeCEEEEccCCCccC
Confidence 001 1244556667777 599995 678999876 5667777888899999999999999987654
No 168
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.53 E-value=3.3e-07 Score=88.28 Aligned_cols=100 Identities=20% Similarity=0.300 Sum_probs=74.8
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCc----------------------------------------
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR---------------------------------------- 79 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~---------------------------------------- 79 (358)
+..+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.+.
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 101 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFRS 101 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECCC
Confidence 3568999999999999999999999999999987643100
Q ss_pred --c---CC-----------------HHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEee
Q 018320 80 --L---FT-----------------PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGI 137 (358)
Q Consensus 80 --~---~~-----------------~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~ 137 (358)
. ++ ..+.+.+.+.+.+ ++++++++|++++.++++ ..+++.+|+++.+|.||.|.
T Consensus 102 g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~--v~v~~~~g~~~~a~~vV~Ad 177 (407)
T 3rp8_A 102 GENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDADG--VTVWFTDGSSASGDLLIAAD 177 (407)
T ss_dssp CCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETTE--EEEEETTSCEEEESEEEECC
T ss_pred CCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCCc--EEEEEcCCCEEeeCEEEECC
Confidence 0 00 1123334444433 889999999999874443 45788899999999999999
Q ss_pred CCCCCh
Q 018320 138 GIRPNT 143 (358)
Q Consensus 138 G~~p~~ 143 (358)
|.....
T Consensus 178 G~~S~v 183 (407)
T 3rp8_A 178 GSHSAL 183 (407)
T ss_dssp CTTCSS
T ss_pred CcChHH
Confidence 987655
No 169
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.53 E-value=1.5e-07 Score=91.06 Aligned_cols=101 Identities=25% Similarity=0.320 Sum_probs=73.9
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCC--cEEEEeeCCcccCc--cCCHHHH-HHH-H----HHHHhCCCEEEcCCeeeEEE
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKI--NVTMVFPEAHCMAR--LFTPKIA-SYY-E----EYYKSKGVKFVKGTVLSSFD 110 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~--~Vtlv~~~~~~l~~--~~~~~~~-~~~-~----~~l~~~gV~v~~~~~v~~i~ 110 (358)
..+++|||||+.|+.+|..|++.|. +|+++++.+.+.-. .+...+. ... . +.+++.||+++.+++++.++
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~ 86 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRLDCKRAPEVEWLLGVTAQSFD 86 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCSGGGGTHHHHHCCGGGSBCCCTTSCSCEEEETCCEEEEE
T ss_pred CCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccCCCCCHHHhCCCchhhhhHHHHHHCCCEEEcCCEEEEEE
Confidence 4689999999999999999999998 49999998753210 0111111 000 0 03556799999999999997
Q ss_pred EcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChhh
Q 018320 111 VDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSL 145 (358)
Q Consensus 111 ~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l 145 (358)
. +.+ .+.+.+|+++.+|.+|+|+|.+|....
T Consensus 87 ~--~~~--~v~~~~g~~~~~d~lviAtG~~~~~~~ 117 (408)
T 2gqw_A 87 P--QAH--TVALSDGRTLPYGTLVLATGAAPRALP 117 (408)
T ss_dssp T--TTT--EEEETTSCEEECSEEEECCCEEECCCG
T ss_pred C--CCC--EEEECCCCEEECCEEEECCCCCCCCCC
Confidence 5 222 466778889999999999999887543
No 170
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.52 E-value=8.3e-07 Score=89.97 Aligned_cols=102 Identities=22% Similarity=0.319 Sum_probs=79.7
Q ss_pred CcEEEEcCcHHHHHHHHHHHhC------CCcEEEEeeCCcccCc------------------------------------
Q 018320 42 GNAVVIGGGYIGMECAASLVIN------KINVTMVFPEAHCMAR------------------------------------ 79 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~------g~~Vtlv~~~~~~l~~------------------------------------ 79 (358)
-+|+|||||++|+.+|..|++. |.+|+|+|+.+.+...
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~~~~ 115 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDRFG 115 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeechhhee
Confidence 4799999999999999999999 9999999987533110
Q ss_pred --------cC---C--------------HHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcC------CC---
Q 018320 80 --------LF---T--------------PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLR------DG--- 125 (358)
Q Consensus 80 --------~~---~--------------~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~------~g--- 125 (358)
.+ + ..+...+.+.+++.||++++++.++++..++++.+..|.+. +|
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~ 195 (584)
T 2gmh_A 116 ILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPK 195 (584)
T ss_dssp EECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEE
T ss_pred eeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcc
Confidence 00 0 13455667777888999999999999987666777667665 33
Q ss_pred ------cEEecCeEEEeeCCCCCh
Q 018320 126 ------NRLPTDMVVVGIGIRPNT 143 (358)
Q Consensus 126 ------~~i~~D~vi~a~G~~p~~ 143 (358)
.++.+|.||.|.|.++..
T Consensus 196 ~~~~~g~~i~Ad~VV~AdG~~S~v 219 (584)
T 2gmh_A 196 TTFERGLELHAKVTIFAEGCHGHL 219 (584)
T ss_dssp EEEECCCEEECSEEEECCCTTCHH
T ss_pred cccCCceEEECCEEEEeeCCCchH
Confidence 689999999999988753
No 171
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.51 E-value=7.3e-07 Score=90.44 Aligned_cols=101 Identities=20% Similarity=0.249 Sum_probs=78.3
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCc-----------------------------------------
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR----------------------------------------- 79 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~----------------------------------------- 79 (358)
..+|+|||||++|+-+|..|++.|.+|+|+|+.+.....
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 102 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQDQ 102 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECSSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEecCCC
Confidence 578999999999999999999999999999986311000
Q ss_pred ---------------------cCC-HHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcC-CC--cEEecCeEE
Q 018320 80 ---------------------LFT-PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLR-DG--NRLPTDMVV 134 (358)
Q Consensus 80 ---------------------~~~-~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~-~g--~~i~~D~vi 134 (358)
.++ ..+...+.+.+++.||+++.+++|++++.+ ++....|.+. +| .++.+|.||
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~-~g~~~~V~~~~~G~~~~i~AdlVV 181 (591)
T 3i3l_A 103 APWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLS-DPDRVVLTVRRGGESVTVESDFVI 181 (591)
T ss_dssp CCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECC-STTCEEEEEEETTEEEEEEESEEE
T ss_pred ccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEc-CCCEEEEEEecCCceEEEEcCEEE
Confidence 011 245566777778899999999999999863 3444566666 66 579999999
Q ss_pred EeeCCCCC
Q 018320 135 VGIGIRPN 142 (358)
Q Consensus 135 ~a~G~~p~ 142 (358)
.|+|..+.
T Consensus 182 ~AdG~~S~ 189 (591)
T 3i3l_A 182 DAGGSGGP 189 (591)
T ss_dssp ECCGGGCH
T ss_pred ECCCCcch
Confidence 99998664
No 172
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.50 E-value=4.6e-07 Score=85.12 Aligned_cols=95 Identities=18% Similarity=0.289 Sum_probs=69.0
Q ss_pred CcEEEEcCcHHHHHHHHHHHh---CCCcEEEEeeCCcccCc-------------------cC---CH---HH--------
Q 018320 42 GNAVVIGGGYIGMECAASLVI---NKINVTMVFPEAHCMAR-------------------LF---TP---KI-------- 85 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~---~g~~Vtlv~~~~~~l~~-------------------~~---~~---~~-------- 85 (358)
.+|+|||||++|+.+|..|++ .|.+|+|+|+.+.+..+ .+ +. ..
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~ 81 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDELL 81 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHHH
Confidence 379999999999999999999 99999999987432110 00 00 11
Q ss_pred ------------------------------HHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEE
Q 018320 86 ------------------------------ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVV 135 (358)
Q Consensus 86 ------------------------------~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~ 135 (358)
...++...++.|+++++++.|++|+.++++ ..+.+.+|+++.+|.||+
T Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~--~~v~~~~g~~~~ad~vV~ 159 (342)
T 3qj4_A 82 AYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRDDK--WEVSKQTGSPEQFDLIVL 159 (342)
T ss_dssp HTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECSSS--EEEEESSSCCEEESEEEE
T ss_pred hCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCE--EEEEECCCCEEEcCEEEE
Confidence 111222223348999999999999875444 357788888899999999
Q ss_pred eeC
Q 018320 136 GIG 138 (358)
Q Consensus 136 a~G 138 (358)
|++
T Consensus 160 A~p 162 (342)
T 3qj4_A 160 TMP 162 (342)
T ss_dssp CSC
T ss_pred CCC
Confidence 986
No 173
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.49 E-value=1.6e-07 Score=91.97 Aligned_cols=101 Identities=16% Similarity=0.169 Sum_probs=72.4
Q ss_pred CcEEEEcCcHHHHHHHHHHHhC--CCcEEEEeeCCccc--C--------ccC-C-HHHHHHHHHHHHhCCCEEEcCCeee
Q 018320 42 GNAVVIGGGYIGMECAASLVIN--KINVTMVFPEAHCM--A--------RLF-T-PKIASYYEEYYKSKGVKFVKGTVLS 107 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~--g~~Vtlv~~~~~~l--~--------~~~-~-~~~~~~~~~~l~~~gV~v~~~~~v~ 107 (358)
++++|||||+.|+.+|..|++. |.+|+|+++.+.+. + ... + .++.....+.+++.||+++.++.+.
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~ 80 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTGEKMESRGVNVFSNTEIT 80 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGGGHHHHHTTSSCCGGGSBSCCHHHHHHTTCEEEETEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccccchhhhcCccCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 3799999999999999999998 99999999987531 0 000 1 1112223456778899999999999
Q ss_pred EEEEcCCCcEEEEEc-CCCc--EEecCeEEEeeCCCCChh
Q 018320 108 SFDVDSNGKVVAVNL-RDGN--RLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 108 ~i~~~~~g~v~~v~~-~~g~--~i~~D~vi~a~G~~p~~~ 144 (358)
.++. ++..+ .+.. .+|+ ++.+|.+|+|+|.+|...
T Consensus 81 ~i~~-~~~~v-~~~~~~~g~~~~~~~d~lviAtG~~p~~p 118 (447)
T 1nhp_A 81 AIQP-KEHQV-TVKDLVSGEERVENYDKLIISPGAVPFEL 118 (447)
T ss_dssp EEET-TTTEE-EEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEeC-CCCEE-EEEecCCCceEEEeCCEEEEcCCCCcCCC
Confidence 9875 23332 3332 3465 489999999999887653
No 174
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.48 E-value=5.2e-07 Score=90.27 Aligned_cols=101 Identities=21% Similarity=0.205 Sum_probs=76.9
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccC-------------------------------------------
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMA------------------------------------------- 78 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~------------------------------------------- 78 (358)
.+|+|||||++|+-+|..|++.|.+|+|+|+.+.+..
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 85 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIRLAE 85 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEEEES
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeeeEEe
Confidence 5799999999999999999999999999998653200
Q ss_pred ------------c-----------------cC-CHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCc--EEEEEcCCC-
Q 018320 79 ------------R-----------------LF-TPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGK--VVAVNLRDG- 125 (358)
Q Consensus 79 ------------~-----------------~~-~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~--v~~v~~~~g- 125 (358)
. .+ ...+...+.+.+++.|+++++++++++++.++++. -..+++.++
T Consensus 86 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~ 165 (535)
T 3ihg_A 86 SVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPD 165 (535)
T ss_dssp SSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETT
T ss_pred ccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCC
Confidence 0 00 12345566777788899999999999998755410 234555555
Q ss_pred --cEEecCeEEEeeCCCCC
Q 018320 126 --NRLPTDMVVVGIGIRPN 142 (358)
Q Consensus 126 --~~i~~D~vi~a~G~~p~ 142 (358)
.++.+|.||.|.|....
T Consensus 166 ~~~~i~a~~vV~AdG~~S~ 184 (535)
T 3ihg_A 166 GEYDLRAGYLVGADGNRSL 184 (535)
T ss_dssp EEEEEEEEEEEECCCTTCH
T ss_pred CeEEEEeCEEEECCCCcch
Confidence 67999999999998763
No 175
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.48 E-value=9.1e-08 Score=94.11 Aligned_cols=90 Identities=18% Similarity=0.197 Sum_probs=70.5
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcc-------cCcc-CCHHHHHHHHHHHHhCCCEEEcCCeeeEEEE
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHC-------MARL-FTPKIASYYEEYYKSKGVKFVKGTVLSSFDV 111 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~-------l~~~-~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~ 111 (358)
.+++|+|||||+.|+.+|..|++.|.+|+|+++.+.+ +|.. ++.++.....+.+++.||++++++.+..
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~--- 197 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADAGVIYHPNFEVGR--- 197 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHHTTCEEETTCCBTT---
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCcEEEeCCEecc---
Confidence 3578999999999999999999999999999998765 2221 4567777778889999999999986520
Q ss_pred cCCCcEEEEEcCCCcEEecCeEEEeeCCC
Q 018320 112 DSNGKVVAVNLRDGNRLPTDMVVVGIGIR 140 (358)
Q Consensus 112 ~~~g~v~~v~~~~g~~i~~D~vi~a~G~~ 140 (358)
.+.+.++ .+.+|.|++|+|..
T Consensus 198 -------~v~~~~~-~~~~d~vvlAtG~~ 218 (456)
T 2vdc_G 198 -------DASLPEL-RRKHVAVLVATGVY 218 (456)
T ss_dssp -------TBCHHHH-HSSCSEEEECCCCC
T ss_pred -------EEEhhHh-HhhCCEEEEecCCC
Confidence 1222222 36799999999986
No 176
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.45 E-value=1.1e-06 Score=89.42 Aligned_cols=101 Identities=14% Similarity=0.283 Sum_probs=76.5
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCc-cc-----------------------Cc-----------------
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAH-CM-----------------------AR----------------- 79 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~-~l-----------------------~~----------------- 79 (358)
.-+|+|||||..|+++|..|++.|.+|+|+++.+. +. +.
T Consensus 21 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~l~ 100 (641)
T 3cp8_A 21 MYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRMLN 100 (641)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEEEC
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhhcc
Confidence 35899999999999999999999999999998631 10 00
Q ss_pred ------------cCCH-HHHHHHHHHHHh-CCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCCh
Q 018320 80 ------------LFTP-KIASYYEEYYKS-KGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNT 143 (358)
Q Consensus 80 ------------~~~~-~~~~~~~~~l~~-~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 143 (358)
..|. .+...+.+.+++ .||+++. ..|+.+.. +++.+..|.+.+|.++.+|.||+|+|..++.
T Consensus 101 ~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~-~~V~~L~~-d~g~V~GV~t~~G~~i~Ad~VVLATG~~s~~ 176 (641)
T 3cp8_A 101 RSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQ-DTVIGVSA-NSGKFSSVTVRSGRAIQAKAAILACGTFLNG 176 (641)
T ss_dssp SSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEE-CCEEEEEE-ETTEEEEEEETTSCEEEEEEEEECCTTCBTC
T ss_pred cccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEe-eEEEEEEe-cCCEEEEEEECCCcEEEeCEEEECcCCCCCc
Confidence 0111 345556667777 4999975 48888875 4566666888889999999999999987653
No 177
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.45 E-value=4.8e-07 Score=88.37 Aligned_cols=101 Identities=15% Similarity=0.206 Sum_probs=69.3
Q ss_pred cEEEEcCcHHHHHHHHHHHhCC--CcEEEEeeCCcccC-c---------cC-CHH--HHHHHHHHHHhCCCEEEcCCeee
Q 018320 43 NAVVIGGGYIGMECAASLVINK--INVTMVFPEAHCMA-R---------LF-TPK--IASYYEEYYKSKGVKFVKGTVLS 107 (358)
Q Consensus 43 ~vvVIGgG~~gle~A~~L~~~g--~~Vtlv~~~~~~l~-~---------~~-~~~--~~~~~~~~l~~~gV~v~~~~~v~ 107 (358)
||+|||||+.|+.+|..|+++| .+|+|+++.+...- + .. +.. +....++.+++.||+++.+++|+
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V~ 81 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYALAYTPEKFYDRKQITVKTYHEVI 81 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGGHHHHHTTSSCCGGGTBCCCHHHHHHHHCCEEEETEEEE
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcchhHHHHcCCccchhhhhhcCHHHHHHhcCCEEEeCCeEE
Confidence 6999999999999999999988 57999998765311 0 00 000 00112345677899999999999
Q ss_pred EEEEcCCCcEEEEEcC--CCcEEecCeEEEeeCCCCChh
Q 018320 108 SFDVDSNGKVVAVNLR--DGNRLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 108 ~i~~~~~g~v~~v~~~--~g~~i~~D~vi~a~G~~p~~~ 144 (358)
+++. +...+...... ++.++.+|.+|+|||.+|+..
T Consensus 82 ~id~-~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p~~p 119 (437)
T 4eqs_A 82 AIND-ERQTVSVLNRKTNEQFEESYDKLILSPGASANSL 119 (437)
T ss_dssp EEET-TTTEEEEEETTTTEEEEEECSEEEECCCEEECCC
T ss_pred EEEc-cCcEEEEEeccCCceEEEEcCEEEECCCCccccc
Confidence 9975 33322222222 234689999999999988754
No 178
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.44 E-value=9.6e-07 Score=83.57 Aligned_cols=52 Identities=17% Similarity=0.284 Sum_probs=40.2
Q ss_pred HHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCC
Q 018320 86 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIR 140 (358)
Q Consensus 86 ~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~ 140 (358)
...+.+.+++.|++++.+++|++++.++++ ..+++.+| ++.+|.||+|+|..
T Consensus 152 ~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~--~~v~~~~g-~~~a~~vV~a~G~~ 203 (372)
T 2uzz_A 152 IKTWIQLAKEAGCAQLFNCPVTAIRHDDDG--VTIETADG-EYQAKKAIVCAGTW 203 (372)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEECSSS--EEEEESSC-EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHCCCEEEcCCEEEEEEEcCCE--EEEEECCC-eEEcCEEEEcCCcc
Confidence 344556677889999999999999874443 34666666 59999999999964
No 179
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.43 E-value=1.7e-06 Score=86.24 Aligned_cols=101 Identities=18% Similarity=0.182 Sum_probs=76.7
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcc--------cCc----------------------------------
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHC--------MAR---------------------------------- 79 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~--------l~~---------------------------------- 79 (358)
.+|+|||||+.|+-+|..|++.|.+|+|+|+.+.. .+.
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~~~ 87 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWGKEP 87 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECSSCS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEecCCc
Confidence 58999999999999999999999999999987511 000
Q ss_pred -------------------cCC-HHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEE--EEcCCCc--EEecCeEEE
Q 018320 80 -------------------LFT-PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVA--VNLRDGN--RLPTDMVVV 135 (358)
Q Consensus 80 -------------------~~~-~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~--v~~~~g~--~i~~D~vi~ 135 (358)
.++ ..+...+.+.+++.||+++.+++|+++.. +++.+.. +...+|+ ++.+|.||.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~-~~~~v~gv~~~~~dG~~~~i~ad~VI~ 166 (512)
T 3e1t_A 88 EPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLF-EGERAVGVRYRNTEGVELMAHARFIVD 166 (512)
T ss_dssp SCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEE-ETTEEEEEEEECSSSCEEEEEEEEEEE
T ss_pred cccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEE-ECCEEEEEEEEeCCCCEEEEEcCEEEE
Confidence 001 23455666777789999999999999987 4555433 4455674 799999999
Q ss_pred eeCCCCCh
Q 018320 136 GIGIRPNT 143 (358)
Q Consensus 136 a~G~~p~~ 143 (358)
|+|..+..
T Consensus 167 AdG~~S~v 174 (512)
T 3e1t_A 167 ASGNRTRV 174 (512)
T ss_dssp CCCTTCSS
T ss_pred CCCcchHH
Confidence 99987643
No 180
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.42 E-value=5.5e-09 Score=103.29 Aligned_cols=143 Identities=13% Similarity=0.076 Sum_probs=92.7
Q ss_pred EEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHH--------HHHHHHHHHhCCCEEEcCCeeeEEEEcCCC
Q 018320 44 AVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKI--------ASYYEEYYKSKGVKFVKGTVLSSFDVDSNG 115 (358)
Q Consensus 44 vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~--------~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g 115 (358)
++++|+| ++++++.++..|..+ +.++++++++. ++++. +..+.+.+++.|. ++++.+. + + .
T Consensus 215 ~~~~ggg--~~~~ae~~~~~G~~~-v~~~g~rf~~~-~~~~~el~~rd~v~~~i~~~~~~~~~-v~ld~~~--~---~-~ 283 (472)
T 2e5v_A 215 VTSLDGE--VFLLTETLRGEGAQI-INENGERFLFN-YDKRGELAPRDILSRAIYIEMLKGHK-VFIDLSK--I---E-D 283 (472)
T ss_dssp EECGGGC--CEECCTHHHHTTCEE-EETTCCCGGGG-TCTTGGGSCHHHHHHHHHHHHHHTCC-EEEECTT--C---T-T
T ss_pred EEccCCC--ceeeehhhcCCceEE-ECCCCCCCCcc-CCcccCcCchhHHHHHHHHHHHhCCc-EEEeccc--h---H-H
Confidence 4556776 899999999999888 88889999876 45543 5666677766653 3322110 0 0 0
Q ss_pred cEEEEEcCCCcEEe-cCeEEEeeCCCCChhhhhcc--cccccCcEEEeccccCCCCcEEEEcccccccccccCcccccc-
Q 018320 116 KVVAVNLRDGNRLP-TDMVVVGIGIRPNTSLFEGQ--LTLEKGGIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLE- 191 (358)
Q Consensus 116 ~v~~v~~~~g~~i~-~D~vi~a~G~~p~~~l~~~~--~~~~~g~i~vd~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~- 191 (358)
+ .+.++ .+.++++.|..|+ +++.-. .....|+|.||+++||++|+|||+|||+... .+|.. ++.
T Consensus 284 ------~--~~~~~~~~~~~~~~G~dp~-~~i~v~p~~~~~~GGI~vd~~~~t~ipgLyAaGd~a~~~--~hg~~-rl~~ 351 (472)
T 2e5v_A 284 ------F--ERKFPVVAKYLARHGHNYK-VKIPIFPAAHFVDGGIRVNIRGESNIVNLYAIGEVSDSG--LHGAN-RLAS 351 (472)
T ss_dssp ------H--HHHCHHHHHHHHHTTCCTT-SCEECEEEEEEESCEEECCTTCBCSSBTEEECGGGEECS--SSTTS-CCTT
T ss_pred ------H--HHHhHHHHHHHHHhCcCcc-cceEeehhhceeCCCeEECCCCccccCCEEecchhcccc--cCCCC-CCCc
Confidence 1 02333 4777888999999 554422 1225799999999999999999999998832 11222 112
Q ss_pred -cHHHHHHHHHHHHHHHcC
Q 018320 192 -HVDSARKSAKHAVAAIME 209 (358)
Q Consensus 192 -~~~~A~~~g~~aa~~i~g 209 (358)
....+...|+.|+.++.+
T Consensus 352 ~sl~~~~v~G~~a~~~~a~ 370 (472)
T 2e5v_A 352 NSLLEGLVFGINLPRYVDS 370 (472)
T ss_dssp HHHHHHHHHHHHGGGTTTS
T ss_pred ccHHHHHHHHHHHHHHHHh
Confidence 233455567777777654
No 181
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.42 E-value=1.8e-06 Score=88.94 Aligned_cols=53 Identities=15% Similarity=0.186 Sum_probs=41.9
Q ss_pred HHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCC
Q 018320 87 SYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRP 141 (358)
Q Consensus 87 ~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p 141 (358)
..+.+.+++.|++++++++|+++..+++ . ..+++.+|.++.+|.||+|+|...
T Consensus 421 ~aL~~~a~~~Gv~i~~~t~V~~l~~~~~-~-v~V~t~~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 421 RNVLELAQQQGLQIYYQYQLQNFSRKDD-C-WLLNFAGDQQATHSVVVLANGHQI 473 (676)
T ss_dssp HHHHHHHHHTTCEEEESCCEEEEEEETT-E-EEEEETTSCEEEESEEEECCGGGG
T ss_pred HHHHHHHHhCCCEEEeCCeeeEEEEeCC-e-EEEEECCCCEEECCEEEECCCcch
Confidence 3345556678999999999999987443 3 367777888899999999999753
No 182
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.42 E-value=3.3e-07 Score=90.54 Aligned_cols=101 Identities=21% Similarity=0.295 Sum_probs=71.3
Q ss_pred CcEEEEcCcHHHHHHHHHHHhC--CCcEEEEeeCCccc-Cc-----c-----CC-HHHHHHHHHHH-HhCCCEEEcCCee
Q 018320 42 GNAVVIGGGYIGMECAASLVIN--KINVTMVFPEAHCM-AR-----L-----FT-PKIASYYEEYY-KSKGVKFVKGTVL 106 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~--g~~Vtlv~~~~~~l-~~-----~-----~~-~~~~~~~~~~l-~~~gV~v~~~~~v 106 (358)
++++|||||+.|+.+|..|++. |.+|+|+++.+.+. .. . .+ .++.....+.+ ++.||+++.++.+
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gv~~~~~~~v 116 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRDKYGIDAKVRHEV 116 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGHHHHHTTSSSCGGGGBSSCHHHHHHTTCCEEESSEEE
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCcchhhcCCcCCHHHhhhcCHHHHHhhcCCEEEeCCEE
Confidence 5899999999999999999986 89999999986531 00 0 00 11111123445 3459999999999
Q ss_pred eEEEEcCCCcEEEEEc-CCCc--EEecCeEEEeeCCCCChh
Q 018320 107 SSFDVDSNGKVVAVNL-RDGN--RLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 107 ~~i~~~~~g~v~~v~~-~~g~--~i~~D~vi~a~G~~p~~~ 144 (358)
+.++. ++..+ .+.. .+|+ ++.+|.+|+|+|.+|...
T Consensus 117 ~~i~~-~~~~v-~v~~~~~g~~~~~~~d~lviAtG~~p~~p 155 (480)
T 3cgb_A 117 TKVDT-EKKIV-YAEHTKTKDVFEFSYDRLLIATGVRPVMP 155 (480)
T ss_dssp EEEET-TTTEE-EEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEEEC-CCCEE-EEEEcCCCceEEEEcCEEEECCCCcccCC
Confidence 99975 23333 3433 4566 799999999999887643
No 183
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.42 E-value=2e-07 Score=91.39 Aligned_cols=100 Identities=13% Similarity=0.165 Sum_probs=71.7
Q ss_pred cEEEEcCcHHHHHHHHHHHhC--CCcEEEEeeCCccc----------CccC---CH-HHHHHHHHHHHhCCCEEEcCCee
Q 018320 43 NAVVIGGGYIGMECAASLVIN--KINVTMVFPEAHCM----------ARLF---TP-KIASYYEEYYKSKGVKFVKGTVL 106 (358)
Q Consensus 43 ~vvVIGgG~~gle~A~~L~~~--g~~Vtlv~~~~~~l----------~~~~---~~-~~~~~~~~~l~~~gV~v~~~~~v 106 (358)
+++|||||+.|+.+|..|++. |.+|+|+++.+.+. ...+ ++ ++...+.+.+++.||+++.++.+
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 81 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCGIALYLGKEIKNNDPRGLFYSSPEELSNLGANVQMRHQV 81 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGGHHHHHTTCBGGGCGGGGBSCCHHHHHHTTCEEEESEEE
T ss_pred eEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccccchhhhcCCcccCCHHHhhhcCHHHHHHcCCEEEeCCEE
Confidence 699999999999999999998 99999999987521 1101 11 11122345677889999999999
Q ss_pred eEEEEcCCCcEEEEEc-CC--CcEEecCeEEEeeCCCCChh
Q 018320 107 SSFDVDSNGKVVAVNL-RD--GNRLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 107 ~~i~~~~~g~v~~v~~-~~--g~~i~~D~vi~a~G~~p~~~ 144 (358)
..++.+ +..+ .+.. .+ +.++.+|.+|+|+|.+|...
T Consensus 82 ~~i~~~-~~~v-~v~~~~~g~~~~~~~d~lviAtGs~p~~p 120 (452)
T 2cdu_A 82 TNVDPE-TKTI-KVKDLITNEEKTEAYDKLIMTTGSKPTVP 120 (452)
T ss_dssp EEEEGG-GTEE-EEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEEEcC-CCEE-EEEecCCCceEEEECCEEEEccCCCcCCC
Confidence 998752 3332 2332 12 45799999999999887653
No 184
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.41 E-value=6.7e-07 Score=90.35 Aligned_cols=99 Identities=18% Similarity=0.246 Sum_probs=76.6
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCccc-------------------------------------Cc----c
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM-------------------------------------AR----L 80 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l-------------------------------------~~----~ 80 (358)
.+|+|||||++|+-+|..|++.|.+|+|+|+.+.+. .. .
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 129 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFTQG 129 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCTTC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCccccc
Confidence 479999999999999999999999999999854321 00 0
Q ss_pred ---------------C-CHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEc--CCC-cEEecCeEEEeeCCCC
Q 018320 81 ---------------F-TPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNL--RDG-NRLPTDMVVVGIGIRP 141 (358)
Q Consensus 81 ---------------~-~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~--~~g-~~i~~D~vi~a~G~~p 141 (358)
+ ...+...+.+.+++.|++++.+++|++++.++++. .+++ .+| +++.+|.||.|.|.++
T Consensus 130 ~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v--~v~~~~~~G~~~~~a~~vV~ADG~~S 207 (570)
T 3fmw_A 130 LDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAV--EVTVAGPSGPYPVRARYGVGCDGGRS 207 (570)
T ss_dssp CBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCE--EEEEEETTEEEEEEESEEEECSCSSC
T ss_pred ccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeE--EEEEEeCCCcEEEEeCEEEEcCCCCc
Confidence 0 12355667777777899999999999998755553 3555 678 7899999999999876
Q ss_pred C
Q 018320 142 N 142 (358)
Q Consensus 142 ~ 142 (358)
.
T Consensus 208 ~ 208 (570)
T 3fmw_A 208 T 208 (570)
T ss_dssp H
T ss_pred h
Confidence 3
No 185
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.40 E-value=2.3e-06 Score=81.36 Aligned_cols=55 Identities=22% Similarity=0.457 Sum_probs=41.6
Q ss_pred HHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCC
Q 018320 85 IASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPN 142 (358)
Q Consensus 85 ~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~ 142 (358)
+...+.+.+++.|++++.+++|++++.++++ ..+++.+| ++.+|.||+|+|..++
T Consensus 152 ~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~--~~v~~~~g-~~~a~~vV~A~G~~~~ 206 (389)
T 2gf3_A 152 CIRAYRELAEARGAKVLTHTRVEDFDISPDS--VKIETANG-SYTADKLIVSMGAWNS 206 (389)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEECSSC--EEEEETTE-EEEEEEEEECCGGGHH
T ss_pred HHHHHHHHHHHCCCEEEcCcEEEEEEecCCe--EEEEeCCC-EEEeCEEEEecCccHH
Confidence 3445566777889999999999999874443 34666555 7999999999997643
No 186
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.40 E-value=2.6e-06 Score=84.62 Aligned_cols=101 Identities=21% Similarity=0.345 Sum_probs=78.0
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCc----------------------c-----------------
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR----------------------L----------------- 80 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~----------------------~----------------- 80 (358)
...+|+|||||++|+-+|..|++.|.+|+|+|+.+.+... .
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 90 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPVD 90 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceecc
Confidence 3468999999999999999999999999999986432100 0
Q ss_pred ---C-----------CHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCc---EEecCeEEEeeCCCCC
Q 018320 81 ---F-----------TPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGN---RLPTDMVVVGIGIRPN 142 (358)
Q Consensus 81 ---~-----------~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~---~i~~D~vi~a~G~~p~ 142 (358)
+ ...+.+.+.+.+++.|++++.++++++++.++++ + .+++.++. ++.+|.||.|.|.+..
T Consensus 91 ~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~-v-~v~~~~~~g~~~~~a~~vVgADG~~S~ 167 (499)
T 2qa2_A 91 FGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDH-V-VVEVEGPDGPRSLTTRYVVGCDGGRST 167 (499)
T ss_dssp GGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSC-E-EEEEECSSCEEEEEEEEEEECCCTTCH
T ss_pred cccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCE-E-EEEEEcCCCcEEEEeCEEEEccCcccH
Confidence 0 1235566667777889999999999999875554 3 46666664 7999999999998764
No 187
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.40 E-value=3.2e-06 Score=84.60 Aligned_cols=56 Identities=16% Similarity=0.335 Sum_probs=44.9
Q ss_pred HHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCCh
Q 018320 87 SYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNT 143 (358)
Q Consensus 87 ~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 143 (358)
..+.+.+++.|++++.+ +|++++.++++.+..+.+.+|+++.+|.||.|+|..+..
T Consensus 169 ~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~ 224 (538)
T 2aqj_A 169 DFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGLL 224 (538)
T ss_dssp HHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCCC
T ss_pred HHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchhh
Confidence 34455566789999999 899998756666667888888889999999999986654
No 188
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.39 E-value=1.4e-06 Score=86.10 Aligned_cols=50 Identities=24% Similarity=0.379 Sum_probs=41.9
Q ss_pred HHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCC
Q 018320 90 EEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIR 140 (358)
Q Consensus 90 ~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~ 140 (358)
.+.+++.|++|++++.|++|.. +++++..|++.||+++.+|.||++++..
T Consensus 228 ~~~~~~~Gg~I~~~~~V~~I~~-~~~~~~gV~~~~g~~~~ad~VV~~a~~~ 277 (501)
T 4dgk_A 228 IKLFQDLGGEVVLNARVSHMET-TGNKIEAVHLEDGRRFLTQAVASNADVV 277 (501)
T ss_dssp HHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTSCEEECSCEEECCC--
T ss_pred HHHHHHhCCceeeecceeEEEe-eCCeEEEEEecCCcEEEcCEEEECCCHH
Confidence 3456678999999999999987 5678888999999999999999987743
No 189
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.39 E-value=2e-07 Score=92.80 Aligned_cols=100 Identities=19% Similarity=0.351 Sum_probs=68.6
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCccc-----C----ccCCHH-HHHHHHHHH--HhCCCEEEcCCeeeEE
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM-----A----RLFTPK-IASYYEEYY--KSKGVKFVKGTVLSSF 109 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l-----~----~~~~~~-~~~~~~~~l--~~~gV~v~~~~~v~~i 109 (358)
+||||||||+.|+.+|..|.+.+.+||||++.++.. + ..++++ +...+.+.+ ++.+++++.+ ++++|
T Consensus 43 prVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~~~~~~~v~~~~~-~v~~I 121 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYEA-EATSI 121 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHHTTCSSCEEEEEE-EEEEE
T ss_pred CCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCcccccchhHHhhccccHHHhhhhHHHHHHhhcCCeEEEEE-EEEEE
Confidence 489999999999999999999999999999987532 1 112221 111223332 2457888864 68888
Q ss_pred EEcCCCcEEEEE------------------cCCCcEEecCeEEEeeCCCCChh
Q 018320 110 DVDSNGKVVAVN------------------LRDGNRLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 110 ~~~~~g~v~~v~------------------~~~g~~i~~D~vi~a~G~~p~~~ 144 (358)
+.+ ...+ .+. ..++.++++|.+|+|+|.+|+..
T Consensus 122 D~~-~k~V-~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~ 172 (502)
T 4g6h_A 122 NPD-RNTV-TIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTF 172 (502)
T ss_dssp EGG-GTEE-EEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCT
T ss_pred Ehh-hCEE-EEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccC
Confidence 752 2222 222 24567899999999999988764
No 190
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.39 E-value=2.9e-07 Score=91.22 Aligned_cols=101 Identities=16% Similarity=0.181 Sum_probs=72.4
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCC---CcEEEEeeCCccc----------Ccc-C-CHHHHHHHHHHHHhCCCEEEcCCee
Q 018320 42 GNAVVIGGGYIGMECAASLVINK---INVTMVFPEAHCM----------ARL-F-TPKIASYYEEYYKSKGVKFVKGTVL 106 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g---~~Vtlv~~~~~~l----------~~~-~-~~~~~~~~~~~l~~~gV~v~~~~~v 106 (358)
.+++|||||+.|+.+|..|++.| .+|+|+++.+.+. ... . ..++.....+.+++.||+++.++.+
T Consensus 36 ~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~v 115 (490)
T 2bc0_A 36 SKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMALWIGEQIAGPEGLFYSDKEELESLGAKVYMESPV 115 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHHHHTTSSSCSGGGBSCCHHHHHHTTCEEETTCCE
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccchhhcCccCCHHHhhhcCHHHHHhCCCEEEeCCEE
Confidence 68999999999999999999988 9999999987531 000 0 1111112245677889999999999
Q ss_pred eEEEEcCCCcEEEEE-cCCCcEEecCeEEEeeCCCCChh
Q 018320 107 SSFDVDSNGKVVAVN-LRDGNRLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 107 ~~i~~~~~g~v~~v~-~~~g~~i~~D~vi~a~G~~p~~~ 144 (358)
+.++. ++.. ..+. ..++.++.+|.+|+|+|.+|...
T Consensus 116 ~~i~~-~~~~-v~v~~~g~~~~~~~d~lviAtG~~p~~p 152 (490)
T 2bc0_A 116 QSIDY-DAKT-VTALVDGKNHVETYDKLIFATGSQPILP 152 (490)
T ss_dssp EEEET-TTTE-EEEEETTEEEEEECSEEEECCCEEECCC
T ss_pred EEEEC-CCCE-EEEEeCCcEEEEECCEEEECCCCCcCCC
Confidence 99975 2332 2333 22245799999999999887654
No 191
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.38 E-value=1e-06 Score=86.66 Aligned_cols=98 Identities=22% Similarity=0.237 Sum_probs=70.0
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCc-------------------------------------cCCH-
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR-------------------------------------LFTP- 83 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~-------------------------------------~~~~- 83 (358)
.+++|||||+.|+.+|..|++.|.+|+|+++.+.+... .++.
T Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 82 (468)
T 2qae_A 3 YDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMDSA 82 (468)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEECHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCHH
Confidence 47999999999999999999999999999998643100 0111
Q ss_pred H-----------HHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCC--cEEecCeEEEeeCCCCChh
Q 018320 84 K-----------IASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDG--NRLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 84 ~-----------~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g--~~i~~D~vi~a~G~~p~~~ 144 (358)
+ +...+.+.+++.||+++.++.+ .++ . .. ..+.+.+| +++.+|.+|+|+|.+|...
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~-~i~--~-~~-~~v~~~~G~~~~~~~d~lviAtG~~p~~p 151 (468)
T 2qae_A 83 KMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGS-FET--A-HS-IRVNGLDGKQEMLETKKTIIATGSEPTEL 151 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEE-EEE--T-TE-EEEEETTSCEEEEEEEEEEECCCEEECCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE-Eee--C-CE-EEEEecCCceEEEEcCEEEECCCCCcCCC
Confidence 1 1112345567789999988754 343 2 22 34666777 6899999999999887654
No 192
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.37 E-value=2.7e-06 Score=82.54 Aligned_cols=54 Identities=22% Similarity=0.235 Sum_probs=44.2
Q ss_pred HHHHHHHHHhCCCEEEcCC---eeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCC
Q 018320 86 ASYYEEYYKSKGVKFVKGT---VLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIR 140 (358)
Q Consensus 86 ~~~~~~~l~~~gV~v~~~~---~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~ 140 (358)
...+.+.+++.|+++++++ +|+++.. +++.+..|++.+|+++.+|.||+|+|..
T Consensus 164 ~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~-~~~~v~gV~t~~G~~i~Ad~VV~AtG~~ 220 (438)
T 3dje_A 164 LVAAAREAQRMGVKFVTGTPQGRVVTLIF-ENNDVKGAVTADGKIWRAERTFLCAGAS 220 (438)
T ss_dssp HHHHHHHHHHTTCEEEESTTTTCEEEEEE-ETTEEEEEEETTTEEEECSEEEECCGGG
T ss_pred HHHHHHHHHhcCCEEEeCCcCceEEEEEe-cCCeEEEEEECCCCEEECCEEEECCCCC
Confidence 3445566677899999999 9999986 4566666888899899999999999964
No 193
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.37 E-value=2.9e-06 Score=84.27 Aligned_cols=101 Identities=23% Similarity=0.319 Sum_probs=77.3
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccC----------------------cc-----------------
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMA----------------------RL----------------- 80 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~----------------------~~----------------- 80 (358)
+..+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.. .+
T Consensus 10 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 89 (500)
T 2qa1_A 10 SDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLPID 89 (500)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccceecc
Confidence 456899999999999999999999999999998643210 00
Q ss_pred ---C-----------CHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCc---EEecCeEEEeeCCCCC
Q 018320 81 ---F-----------TPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGN---RLPTDMVVVGIGIRPN 142 (358)
Q Consensus 81 ---~-----------~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~---~i~~D~vi~a~G~~p~ 142 (358)
+ ...+.+.+.+.+++.|++++.++++++++.++++ + .+++.++. ++.+|.||.|.|.+..
T Consensus 90 ~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~-v-~v~~~~~~g~~~~~a~~vVgADG~~S~ 166 (500)
T 2qa1_A 90 FGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAG-V-TVEVRGPEGKHTLRAAYLVGCDGGRSS 166 (500)
T ss_dssp GGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTE-E-EEEEEETTEEEEEEESEEEECCCTTCH
T ss_pred cccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCe-E-EEEEEcCCCCEEEEeCEEEECCCcchH
Confidence 0 0234556667777889999999999999875443 3 46666664 7999999999998764
No 194
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.36 E-value=1.2e-06 Score=86.23 Aligned_cols=98 Identities=22% Similarity=0.258 Sum_probs=71.0
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCc------------------------------cCCHH-H-----
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR------------------------------LFTPK-I----- 85 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~------------------------------~~~~~-~----- 85 (358)
.+|+|||||+.|+.+|..|++.|.+|+|+++.+.+... .++.. +
T Consensus 5 ~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (466)
T 3l8k_A 5 YDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQDRKD 84 (466)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHHHHH
Confidence 47999999999999999999999999999976654211 01111 0
Q ss_pred -----H--HHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcE--EecCeEEEeeCCCCChh
Q 018320 86 -----A--SYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNR--LPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 86 -----~--~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~--i~~D~vi~a~G~~p~~~ 144 (358)
. ..+.+.+++.||+++.+ .+..++. + . ..+.+.+|++ +.+|.+|+|+|.+|...
T Consensus 85 ~~~~l~~~~~~~~~~~~~~v~~~~g-~v~~id~--~-~-~~V~~~~g~~~~~~~d~lviAtG~~p~~p 147 (466)
T 3l8k_A 85 YVQELRFKQHKRNMSQYETLTFYKG-YVKIKDP--T-H-VIVKTDEGKEIEAETRYMIIASGAETAKL 147 (466)
T ss_dssp HHHHHHHHHHHHHHTTCTTEEEESE-EEEEEET--T-E-EEEEETTSCEEEEEEEEEEECCCEEECCC
T ss_pred hheeccccchHHHHHHhCCCEEEEe-EEEEecC--C-e-EEEEcCCCcEEEEecCEEEECCCCCccCC
Confidence 1 33344556679999987 5666642 2 2 4567778888 99999999999887653
No 195
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.36 E-value=1.3e-06 Score=84.36 Aligned_cols=100 Identities=18% Similarity=0.217 Sum_probs=74.0
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCc-EEEEeeCCcccCcc----CC---------------------------------
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKIN-VTMVFPEAHCMARL----FT--------------------------------- 82 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~-Vtlv~~~~~~l~~~----~~--------------------------------- 82 (358)
..+|+|||||++|+.+|..|++.|.+ |+|+|+.+.+.+.. +.
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~~g 83 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQSG 83 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcCCC
Confidence 35899999999999999999999999 99999876431100 00
Q ss_pred -----------------------HHHHHHHHHHHHh-CC-CEEEcCCeeeEEEEcCCCcEEEEEcCC---C--cEEecCe
Q 018320 83 -----------------------PKIASYYEEYYKS-KG-VKFVKGTVLSSFDVDSNGKVVAVNLRD---G--NRLPTDM 132 (358)
Q Consensus 83 -----------------------~~~~~~~~~~l~~-~g-V~v~~~~~v~~i~~~~~g~v~~v~~~~---g--~~i~~D~ 132 (358)
.++.+.+.+.+.+ .| ++++++++|++++. +++ ..+.+.+ | .++.+|.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~--v~v~~~~~~~g~~~~~~ad~ 160 (410)
T 3c96_A 84 ATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDG--RVLIGARDGHGKPQALGADV 160 (410)
T ss_dssp CEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETT--EEEEEEEETTSCEEEEEESE
T ss_pred CEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCc--cEEEEecCCCCCceEEecCE
Confidence 1334455566655 35 68999999999987 454 2355544 6 5799999
Q ss_pred EEEeeCCCCCh
Q 018320 133 VVVGIGIRPNT 143 (358)
Q Consensus 133 vi~a~G~~p~~ 143 (358)
||.|.|..+..
T Consensus 161 vV~AdG~~S~v 171 (410)
T 3c96_A 161 LVGADGIHSAV 171 (410)
T ss_dssp EEECCCTTCHH
T ss_pred EEECCCccchh
Confidence 99999987654
No 196
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.35 E-value=7.8e-07 Score=87.46 Aligned_cols=99 Identities=17% Similarity=0.229 Sum_probs=71.1
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCcc------------------------------------CCHH
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARL------------------------------------FTPK 84 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~------------------------------------~~~~ 84 (358)
..+++|||||+.|+.+|..|++.|.+|+++++.+.+.... ++..
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 85 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEIDLA 85 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEECHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccCHH
Confidence 4689999999999999999999999999999986431100 0110
Q ss_pred ------------HHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCC--cEEecCeEEEeeCCCCChh
Q 018320 85 ------------IASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDG--NRLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 85 ------------~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g--~~i~~D~vi~a~G~~p~~~ 144 (358)
+...+.+.+++.||+++.++.+. ++ . .. ..+.+.+| .++.+|.+|+|+|.+|...
T Consensus 86 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~~--~-~~-~~v~~~~G~~~~i~~d~lIiAtGs~p~~p 154 (470)
T 1dxl_A 86 AMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKF-VS--P-SE-ISVDTIEGENTVVKGKHIIIATGSDVKSL 154 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEE-EE--T-TE-EEECCSSSCCEEEECSEEEECCCEEECCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-ec--C-CE-EEEEeCCCceEEEEcCEEEECCCCCCCCC
Confidence 11123455667899999998653 43 2 22 34656677 6899999999999887654
No 197
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.34 E-value=1.7e-06 Score=81.83 Aligned_cols=51 Identities=10% Similarity=-0.011 Sum_probs=40.3
Q ss_pred HHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCC
Q 018320 88 YYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRP 141 (358)
Q Consensus 88 ~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p 141 (358)
.+.+.+++.|+++++++.|++++.+++ . ..|++.+| ++.+|.||+|+|...
T Consensus 159 ~l~~~a~~~Gv~i~~~~~V~~i~~~~~-~-~~V~t~~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 159 GYLRGIRRNQGQVLCNHEALEIRRVDG-A-WEVRCDAG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHHTTCEEESSCCCCEEEEETT-E-EEEECSSE-EEEESEEEECCGGGH
T ss_pred HHHHHHHHCCCEEEcCCEEEEEEEeCC-e-EEEEeCCC-EEEcCEEEECCChhH
Confidence 345566778999999999999987443 3 56777777 899999999999643
No 198
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.32 E-value=1.3e-06 Score=85.47 Aligned_cols=97 Identities=22% Similarity=0.193 Sum_probs=69.9
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCc-----------------------------------cCCHH--
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR-----------------------------------LFTPK-- 84 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~-----------------------------------~~~~~-- 84 (358)
.+++|||||+.|+.+|..|++.|.+|+|+++. .+... .++.+
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 82 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDFAKV 82 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEECHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccCHHHH
Confidence 47999999999999999999999999999987 22100 01111
Q ss_pred ----------HHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCC-cEEecCeEEEeeCCCCChh
Q 018320 85 ----------IASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDG-NRLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 85 ----------~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g-~~i~~D~vi~a~G~~p~~~ 144 (358)
+...+.+.+++.||+++.++.+. ++ .+. ..+.+.+| +++.+|.+|+|+|.+|...
T Consensus 83 ~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-id---~~~-v~V~~~~G~~~i~~d~lViATGs~p~~~ 148 (455)
T 1ebd_A 83 QEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYF-VD---ANT-VRVVNGDSAQTYTFKNAIIATGSRPIEL 148 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEE-EE---TTE-EEEEETTEEEEEECSEEEECCCEEECCB
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE-cc---CCe-EEEEeCCCcEEEEeCEEEEecCCCCCCC
Confidence 12223556778899999987543 43 222 35666677 6899999999999887654
No 199
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.32 E-value=4.7e-06 Score=82.90 Aligned_cols=64 Identities=20% Similarity=0.277 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCC-Cc--EEecC-eEEEeeCCCC-Chhhhh
Q 018320 84 KIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRD-GN--RLPTD-MVVVGIGIRP-NTSLFE 147 (358)
Q Consensus 84 ~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~-g~--~i~~D-~vi~a~G~~p-~~~l~~ 147 (358)
.+...+.+.+++.||++++++.++++..++++++..|...+ ++ ++.+| .||+|+|.-. |.++++
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~~n~~m~~ 271 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFAYNDKMIE 271 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChhhCHHHHH
Confidence 34455566677889999999999999875468877776643 32 58996 9999999665 444443
No 200
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.32 E-value=1.6e-06 Score=85.24 Aligned_cols=99 Identities=22% Similarity=0.264 Sum_probs=68.5
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCc--------------------------ccCc---------cCC-HH
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAH--------------------------CMAR---------LFT-PK 84 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~--------------------------~l~~---------~~~-~~ 84 (358)
..+++|||||+.|+.+|..|++.|.+|+|+++.+. ..+. ..+ ..
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 83 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTIDRSK 83 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSTTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCCCCCHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCCccCHHH
Confidence 46899999999999999999999999999998730 0110 011 11
Q ss_pred HHH-------H-----HHHHHHhC-CCEEEcCCeeeEEEEcCCCcEEEEEcCCC--cEEecCeEEEeeCCCCChh
Q 018320 85 IAS-------Y-----YEEYYKSK-GVKFVKGTVLSSFDVDSNGKVVAVNLRDG--NRLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 85 ~~~-------~-----~~~~l~~~-gV~v~~~~~v~~i~~~~~g~v~~v~~~~g--~~i~~D~vi~a~G~~p~~~ 144 (358)
+.. . +.+.+++. ||+++.+. +..++ .+. ..+.+.+| +++.+|.+|+|+|.+|...
T Consensus 84 ~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~-~~~~~---~~~-~~v~~~~g~~~~~~~d~lviAtGs~p~~p 153 (467)
T 1zk7_A 84 LLAQQQARVDELRHAKYEGILGGNPAITVVHGE-ARFKD---DQS-LTVRLNEGGERVVMFDRCLVATGASPAVP 153 (467)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEE-EEEEE---TTE-EEEEETTSSEEEEECSEEEECCCEEECCC
T ss_pred HHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEE-EEEcc---CCE-EEEEeCCCceEEEEeCEEEEeCCCCCCCC
Confidence 111 1 12345556 99999874 55554 222 35666777 6799999999999887643
No 201
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.31 E-value=1.5e-06 Score=86.84 Aligned_cols=96 Identities=16% Similarity=0.194 Sum_probs=69.7
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCccc---------------------------------CccC-----CH
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM---------------------------------ARLF-----TP 83 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l---------------------------------~~~~-----~~ 83 (358)
.+++|||||+.|+.+|..|++.|.+|+|+++.+.+. +... ..
T Consensus 44 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 123 (523)
T 1mo9_A 44 YDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEKVVGIK 123 (523)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTTCCCCHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHhhhhhHH
Confidence 579999999999999999999999999999987321 1111 11
Q ss_pred HHHHHH----H---HHH-----HhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChh
Q 018320 84 KIASYY----E---EYY-----KSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 84 ~~~~~~----~---~~l-----~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 144 (358)
++...+ . +.+ ++.||++++...++.++. . .+.+. ++++.+|.+|+|+|.+|...
T Consensus 124 ~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~---~---~v~~~-g~~~~~d~lViATGs~p~~p 189 (523)
T 1mo9_A 124 EVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDN---H---TVEAA-GKVFKAKNLILAVGAGPGTL 189 (523)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEET---T---EEEET-TEEEEBSCEEECCCEECCCC
T ss_pred HHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeC---C---EEEEC-CEEEEeCEEEECCCCCCCCC
Confidence 222222 2 455 778999996667777752 2 24444 77899999999999888654
No 202
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.31 E-value=4.2e-06 Score=86.41 Aligned_cols=51 Identities=10% Similarity=0.068 Sum_probs=39.9
Q ss_pred HHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCc-EEecCeEEEeeCCCC
Q 018320 89 YEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGN-RLPTDMVVVGIGIRP 141 (358)
Q Consensus 89 ~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~-~i~~D~vi~a~G~~p 141 (358)
+.+.+++.|++++++++|++++.++++ ..+++.+|. ++.+|.||+|+|...
T Consensus 418 L~~~a~~~Gv~i~~~t~V~~l~~~~~~--v~V~t~~G~~~i~Ad~VVlAtG~~s 469 (689)
T 3pvc_A 418 LMMLAQQNGMTCHYQHELQRLKRIDSQ--WQLTFGQSQAAKHHATVILATGHRL 469 (689)
T ss_dssp HHHHHHHTTCEEEESCCEEEEEECSSS--EEEEEC-CCCCEEESEEEECCGGGT
T ss_pred HHHHHHhCCCEEEeCCeEeEEEEeCCe--EEEEeCCCcEEEECCEEEECCCcch
Confidence 445556789999999999999874444 357777887 899999999999753
No 203
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.30 E-value=6.6e-07 Score=88.80 Aligned_cols=100 Identities=17% Similarity=0.174 Sum_probs=71.3
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCc-------c--C---CHHHHHHHHHHHHhCCCEEEcCCeeeEE
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR-------L--F---TPKIASYYEEYYKSKGVKFVKGTVLSSF 109 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~-------~--~---~~~~~~~~~~~l~~~gV~v~~~~~v~~i 109 (358)
.+|+|||||+.|+.+|..|++. .+|+|+++.+.+... . + ..++...+.+.+ +.|+++++++.+.++
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~~v~~~~~~~v~~i 186 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NENTKIYLETSALGV 186 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CTTEEEETTEEECCC
T ss_pred CCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hcCCEEEcCCEEEEE
Confidence 5799999999999999999999 999999998765211 0 1 123333333334 669999999999988
Q ss_pred EEcCCCcEEEEEcCCCc--EEecCeEEEeeCCCCChh
Q 018320 110 DVDSNGKVVAVNLRDGN--RLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 110 ~~~~~g~v~~v~~~~g~--~i~~D~vi~a~G~~p~~~ 144 (358)
..+ +..+......+++ ++.+|.+|+|+|..|...
T Consensus 187 ~~~-~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~~~ 222 (493)
T 1y56_A 187 FDK-GEYFLVPVVRGDKLIEILAKRVVLATGAIDSTM 222 (493)
T ss_dssp EEC-SSSEEEEEEETTEEEEEEESCEEECCCEEECCC
T ss_pred EcC-CcEEEEEEecCCeEEEEECCEEEECCCCCccCC
Confidence 763 3333222224454 689999999999877643
No 204
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.30 E-value=5.7e-06 Score=83.12 Aligned_cols=55 Identities=24% Similarity=0.407 Sum_probs=44.4
Q ss_pred HHHHHHHhC-CCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCCh
Q 018320 88 YYEEYYKSK-GVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNT 143 (358)
Q Consensus 88 ~~~~~l~~~-gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 143 (358)
.+.+.+++. ||+++.+ +|++++.++++.+..+.+.+|+++.+|.||.|+|..+..
T Consensus 199 ~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~ 254 (550)
T 2e4g_A 199 FLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGLL 254 (550)
T ss_dssp HHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCCC
T ss_pred HHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchhh
Confidence 344555666 9999999 999998756677777888889889999999999976644
No 205
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.29 E-value=3.6e-07 Score=90.71 Aligned_cols=99 Identities=20% Similarity=0.363 Sum_probs=70.6
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhC--CCcEEEEeeCCccc------CccC--CHH--HHHH--------------------
Q 018320 41 GGNAVVIGGGYIGMECAASLVIN--KINVTMVFPEAHCM------ARLF--TPK--IASY-------------------- 88 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~--g~~Vtlv~~~~~~l------~~~~--~~~--~~~~-------------------- 88 (358)
..+++|||||+.|+.+|..|++. |.+|+||++.+.+. ...+ ... ..+.
T Consensus 11 ~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (493)
T 1m6i_A 11 HVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQPPSF 90 (493)
T ss_dssp EEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSSCGGG
T ss_pred cCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhcccccccccccccccccchHh
Confidence 35799999999999999999887 88999999986531 1000 000 0000
Q ss_pred HH--HH---HHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCCh
Q 018320 89 YE--EY---YKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNT 143 (358)
Q Consensus 89 ~~--~~---l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 143 (358)
+. +. +.+.||+++.++.+++++.+ +. .|.+.+|+++.+|.+|+|||.+|..
T Consensus 91 ~~~~~~l~~~~~~gv~~~~g~~v~~id~~-~~---~V~~~~g~~i~yd~lviATGs~p~~ 146 (493)
T 1m6i_A 91 YVSAQDLPHIENGGVAVLTGKKVVQLDVR-DN---MVKLNDGSQITYEKCLIATGGTPRS 146 (493)
T ss_dssp SBCTTTTTTSTTCEEEEEETCCEEEEEGG-GT---EEEETTSCEEEEEEEEECCCEEECC
T ss_pred hcchhhhhhhhcCCeEEEcCCEEEEEECC-CC---EEEECCCCEEECCEEEECCCCCCCC
Confidence 00 00 12468999999999999752 22 4667889999999999999998874
No 206
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.29 E-value=2.7e-06 Score=83.84 Aligned_cols=96 Identities=22% Similarity=0.263 Sum_probs=68.4
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCc-------------------------------------cCCH-
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR-------------------------------------LFTP- 83 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~-------------------------------------~~~~- 83 (358)
.+++|||||+.|+.+|..|++.|.+|+|+++.+.+... .++.
T Consensus 6 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~ 85 (478)
T 1v59_A 6 HDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIKINVA 85 (478)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEEECHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCHH
Confidence 47999999999999999999999999999996533100 0111
Q ss_pred H-----------HHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCC--cE------EecCeEEEeeCCCCC
Q 018320 84 K-----------IASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDG--NR------LPTDMVVVGIGIRPN 142 (358)
Q Consensus 84 ~-----------~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g--~~------i~~D~vi~a~G~~p~ 142 (358)
+ +...+.+.+++.||+++.++.+.. +.+. ..+.+.+| ++ +.+|.||+|+|.+|.
T Consensus 86 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~----~~~~-v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~p~ 158 (478)
T 1v59_A 86 NFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFE----DETK-IRVTPVDGLEGTVKEDHILDVKNIIVATGSEVT 158 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEES----SSSE-EEEECCTTCTTCCSSCEEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEc----cCCe-EEEEecCCCcccccccceEEeCEEEECcCCCCC
Confidence 1 111234566778999999876531 2222 45666666 56 999999999998874
No 207
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.28 E-value=4.8e-06 Score=78.46 Aligned_cols=166 Identities=13% Similarity=0.106 Sum_probs=104.4
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhC--CCcEEEEeeCCcccCc---------------------------------c----C
Q 018320 41 GGNAVVIGGGYIGMECAASLVIN--KINVTMVFPEAHCMAR---------------------------------L----F 81 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~--g~~Vtlv~~~~~~l~~---------------------------------~----~ 81 (358)
..+|+|||||+.|+.+|..|+++ |.+|+|+++.+.+... . .
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~G~~~~~~~ 158 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYEDEGDYVVVKH 158 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcccccCCeEEEec
Confidence 35899999999999999999997 9999999987543200 0 0
Q ss_pred CHHHHHHHHHHHHh-CCCEEEcCCeeeEEEEcCC----------------C--cEEEEEcC--------------CCcEE
Q 018320 82 TPKIASYYEEYYKS-KGVKFVKGTVLSSFDVDSN----------------G--KVVAVNLR--------------DGNRL 128 (358)
Q Consensus 82 ~~~~~~~~~~~l~~-~gV~v~~~~~v~~i~~~~~----------------g--~v~~v~~~--------------~g~~i 128 (358)
..+..+.+.+.+.+ .|++++.++.++++..+++ + ++..+... ++.++
T Consensus 159 ~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i 238 (344)
T 3jsk_A 159 AALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTI 238 (344)
T ss_dssp HHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEE
T ss_pred HHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEE
Confidence 13344556666666 5999999999999865332 2 55555431 23479
Q ss_pred ecCeEEEeeCCCCCh-hh-hhc----cccc-ccCcEEEe---------ccccCCCCcEEEEcccccccccccCccccccc
Q 018320 129 PTDMVVVGIGIRPNT-SL-FEG----QLTL-EKGGIKVT---------GRLQSSNSSVYAVGDVAAFPLKLLGETRRLEH 192 (358)
Q Consensus 129 ~~D~vi~a~G~~p~~-~l-~~~----~~~~-~~g~i~vd---------~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~ 192 (358)
.++.||.|+|..... .+ .+. .+.. ..|.-..+ ++-+--+|++|++|-.+... .|.+++-|.
T Consensus 239 ~Ak~VV~ATG~~s~v~~~~~~~l~~~~~~~~~~g~~~~~~~~~e~~~v~~t~~v~~gl~~~gm~~~~~---~g~~rmgp~ 315 (344)
T 3jsk_A 239 NAPVIISTTGHDGPFGAFSVKRLVSMKQMERLNGMRGLDMQSAEDAIVNNTREIVPGLIVGGMELSEI---DGANRMGPT 315 (344)
T ss_dssp ECSEEEECCCSSSSSSCHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHTCEEEETTEEECGGGHHHH---HTCEECCSC
T ss_pred EcCEEEECCCCCchhhHHHHHHHhhcCcccccCCCcccccccchhhhcccCceEcCCEEEechhhHhh---cCCCCCCcc
Confidence 999999999977552 11 111 1110 01111111 01111369999999887642 345554454
Q ss_pred HHHHHHHHHHHHHHHcC
Q 018320 193 VDSARKSAKHAVAAIME 209 (358)
Q Consensus 193 ~~~A~~~g~~aa~~i~g 209 (358)
...=...|+.||+.|+.
T Consensus 316 fg~m~~sg~~~a~~~~~ 332 (344)
T 3jsk_A 316 FGAMALSGVKAAHEAIR 332 (344)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred cceeeecCHHHHHHHHH
Confidence 44445678888877653
No 208
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.27 E-value=7e-06 Score=79.08 Aligned_cols=55 Identities=24% Similarity=0.341 Sum_probs=41.8
Q ss_pred HHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChhhh
Q 018320 90 EEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLF 146 (358)
Q Consensus 90 ~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~ 146 (358)
.+.+++.|+++++++.|++|.. +++++..|.+ +|+++.+|.||+++|......++
T Consensus 203 ~~~~~~~G~~i~~~~~V~~i~~-~~~~~~gv~~-~g~~~~ad~VV~a~~~~~~~~ll 257 (425)
T 3ka7_A 203 ETVISANGGKIHTGQEVSKILI-ENGKAAGIIA-DDRIHDADLVISNLGHAATAVLC 257 (425)
T ss_dssp HHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEE-TTEEEECSEEEECSCHHHHHHHT
T ss_pred HHHHHHcCCEEEECCceeEEEE-ECCEEEEEEE-CCEEEECCEEEECCCHHHHHHhc
Confidence 3456678999999999999987 4556655665 47889999999999865444443
No 209
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.27 E-value=6.1e-06 Score=81.59 Aligned_cols=97 Identities=22% Similarity=0.238 Sum_probs=68.0
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCc------------------------------------cCC--
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR------------------------------------LFT-- 82 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~------------------------------------~~~-- 82 (358)
..+|+|||||+.|+.+|..|++.|.+|+|+++.+.+... .++
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 104 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANPKLNLQ 104 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCCEECHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCCccCHH
Confidence 368999999999999999999999999999986553110 000
Q ss_pred ----------HHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCC--cEEecCeEEEeeCCCCC
Q 018320 83 ----------PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDG--NRLPTDMVVVGIGIRPN 142 (358)
Q Consensus 83 ----------~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g--~~i~~D~vi~a~G~~p~ 142 (358)
..+...+...+++.+|+++.+... .+ +.+. ..+...+| .++.+|.+|+|||.+|.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~-~~---~~~~-~~v~~~~g~~~~~~~d~lViATGs~p~ 171 (491)
T 3urh_A 105 KMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGK-VL---GQGK-VSVTNEKGEEQVLEAKNVVIATGSDVA 171 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEE-EC---SSSE-EEEECTTSCEEEEECSEEEECCCEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE-Ee---cCCE-EEEEeCCCceEEEEeCEEEEccCCCCC
Confidence 011122344567789999987532 22 2333 35666677 57999999999998864
No 210
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.26 E-value=2.4e-06 Score=84.17 Aligned_cols=98 Identities=16% Similarity=0.163 Sum_probs=69.6
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCc-------------------------------------cCCH-
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR-------------------------------------LFTP- 83 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~-------------------------------------~~~~- 83 (358)
.+++|||||+.|+.+|..|++.|.+|+|+++.+.+... .++.
T Consensus 7 ~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 86 (474)
T 1zmd_A 7 ADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRLNLD 86 (474)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCEEECHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCCccCHH
Confidence 57999999999999999999999999999998643110 0111
Q ss_pred H-----------HHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCC-C-cEEecCeEEEeeCCCCChh
Q 018320 84 K-----------IASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRD-G-NRLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 84 ~-----------~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~-g-~~i~~D~vi~a~G~~p~~~ 144 (358)
. +...+.+.+++.||+++.++.+ .++ . +. ..+.+.+ + +++.+|.+|+|+|.+|...
T Consensus 87 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~-~~~--~-~~-~~v~~~~gg~~~~~~d~lViAtGs~p~~p 155 (474)
T 1zmd_A 87 KMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGK-ITG--K-NQ-VTATKADGGTQVIDTKNILIATGSEVTPF 155 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEE-EEE--T-TE-EEEECTTSCEEEEEEEEEEECCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE-Eec--C-CE-EEEEecCCCcEEEEeCEEEECCCCCCCCC
Confidence 1 1112345667889999988643 332 2 22 3566666 4 5799999999999887654
No 211
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.25 E-value=1.6e-06 Score=84.88 Aligned_cols=96 Identities=23% Similarity=0.233 Sum_probs=67.7
Q ss_pred cEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCc----------------------------------cCCH-H---
Q 018320 43 NAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR----------------------------------LFTP-K--- 84 (358)
Q Consensus 43 ~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~----------------------------------~~~~-~--- 84 (358)
+++|||||+.|+.+|..|++.|.+|+|+++.+.+... .++. +
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 82 (455)
T 2yqu_A 3 DLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVKGVELDLPALMA 82 (455)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEECCEEECHHHHHH
T ss_pred CEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccCCCccCHHHHHH
Confidence 6999999999999999999999999999998643100 0111 1
Q ss_pred --------HHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChh
Q 018320 85 --------IASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 85 --------~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 144 (358)
+...+.+.+++.||+++.++.+. + +... ..+.+ +|+++.+|.+|+|+|.+|...
T Consensus 83 ~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~-i---~~~~-~~v~~-~g~~~~~d~lviAtG~~p~~~ 144 (455)
T 2yqu_A 83 HKDKVVQANTQGVEFLFKKNGIARHQGTARF-L---SERK-VLVEE-TGEELEARYILIATGSAPLIP 144 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCEEEESCEEE-S---SSSE-EEETT-TCCEEEEEEEEECCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-e---cCCe-EEEee-CCEEEEecEEEECCCCCCCCC
Confidence 11123455677899999886532 2 2222 33444 678899999999999887653
No 212
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.25 E-value=8.5e-06 Score=77.90 Aligned_cols=49 Identities=18% Similarity=0.261 Sum_probs=37.4
Q ss_pred HHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCC
Q 018320 89 YEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIR 140 (358)
Q Consensus 89 ~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~ 140 (358)
+.+.+++.|++++++++|++++.+++ .+ .+.+.++ ++.+|.||+|+|..
T Consensus 159 l~~~a~~~Gv~i~~~~~V~~i~~~~~-~v-~v~t~~g-~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 159 LFTLAQAAGATLRAGETVTELVPDAD-GV-SVTTDRG-TYRAGKVVLACGPY 207 (397)
T ss_dssp HHHHHHHTTCEEEESCCEEEEEEETT-EE-EEEESSC-EEEEEEEEECCGGG
T ss_pred HHHHHHHcCCEEECCCEEEEEEEcCC-eE-EEEECCC-EEEcCEEEEcCCcC
Confidence 44556678999999999999986433 33 4555554 79999999999975
No 213
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.24 E-value=1.9e-06 Score=85.19 Aligned_cols=93 Identities=17% Similarity=0.248 Sum_probs=67.8
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCc-----------------------------------cCC----
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR-----------------------------------LFT---- 82 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~-----------------------------------~~~---- 82 (358)
.+|+|||||+.|+.+|..|+++|.+|+|+|+.. +... .++
T Consensus 27 ~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~-~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~~ 105 (484)
T 3o0h_A 27 FDLFVIGSGSGGVRAARLAGALGKRVAIAEEYR-IGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIFNWEKL 105 (484)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCEECHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHhCcCEEEEEeCCC-CCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCccCHHHH
Confidence 489999999999999999999999999999842 1100 011
Q ss_pred --------HHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcC-CCcEEecCeEEEeeCCCCC
Q 018320 83 --------PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLR-DGNRLPTDMVVVGIGIRPN 142 (358)
Q Consensus 83 --------~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~-~g~~i~~D~vi~a~G~~p~ 142 (358)
..+...+...+++.+|+++.+ .+..++ .. .+.+. +++++.+|.+++|+|.+|.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~i~---~~---~v~v~~~~~~~~~d~lviAtG~~p~ 167 (484)
T 3o0h_A 106 VAAKNKEISRLEGLYREGLQNSNVHIYES-RAVFVD---EH---TLELSVTGERISAEKILIATGAKIV 167 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEEES-CEEEEE---TT---EEEETTTCCEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEee---CC---EEEEecCCeEEEeCEEEEccCCCcc
Confidence 122334456677889999987 444453 22 34444 7789999999999998877
No 214
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.24 E-value=1.5e-06 Score=83.15 Aligned_cols=99 Identities=14% Similarity=0.176 Sum_probs=70.8
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCC--CcEEEEeeCCcc------cCccC----CH-HHHH-HHHHHHHhCCCEEEcCCee
Q 018320 41 GGNAVVIGGGYIGMECAASLVINK--INVTMVFPEAHC------MARLF----TP-KIAS-YYEEYYKSKGVKFVKGTVL 106 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g--~~Vtlv~~~~~~------l~~~~----~~-~~~~-~~~~~l~~~gV~v~~~~~v 106 (358)
..+++|||||+.|+.+|..|++.| .+|+++++.+.. ++..+ .+ ++.. .+.+.+++.||+++.++.+
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v 83 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRSYSKPMLSTGFSKNKDADGLAMAEPGAMAEQLNARILTHTRV 83 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSCCCEECGGGGGGTTTTTCCHHHHEEECHHHHHHHTTCEEECSCCC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCCCCccCcccccHHHhCCCCHHHhhccCHHHHHHhCCcEEEeCCEE
Confidence 368999999999999999999998 568999876422 11111 11 1211 2345567889999999999
Q ss_pred eEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChh
Q 018320 107 SSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 107 ~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 144 (358)
+.++.+ +. .+.+.+ .++.+|.+|+|+|.+|...
T Consensus 84 ~~i~~~-~~---~v~~~~-~~~~~d~lviAtG~~p~~p 116 (384)
T 2v3a_A 84 TGIDPG-HQ---RIWIGE-EEVRYRDLVLAWGAEPIRV 116 (384)
T ss_dssp CEEEGG-GT---EEEETT-EEEECSEEEECCCEEECCC
T ss_pred EEEECC-CC---EEEECC-cEEECCEEEEeCCCCcCCC
Confidence 998752 22 344443 5799999999999887653
No 215
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.23 E-value=3e-06 Score=90.70 Aligned_cols=100 Identities=13% Similarity=0.119 Sum_probs=71.9
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCcc-------C----CHHHHHHHHHHHHhC-CCEEEcCCeeeEE
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARL-------F----TPKIASYYEEYYKSK-GVKFVKGTVLSSF 109 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~-------~----~~~~~~~~~~~l~~~-gV~v~~~~~v~~i 109 (358)
.+|+|||+|+.|+.+|..|++.|.+|+|+++.+.+.... + ..+....+.+.+.+. +|++++++.|.++
T Consensus 129 ~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~~~k~~i~~~~~~~~~~~~~~~l~~~~~v~~~~~~~V~~i 208 (965)
T 2gag_A 129 TDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLDTAGEQIDGMDSSAWIEQVTSELAEAEETTHLQRTTVFGS 208 (965)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGGSSCCEETTEEHHHHHHHHHHHHHHSTTEEEESSEEEEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceeccCCccccCCCCHHHHHHHHHHHHhhcCCcEEEeCCEEEee
Confidence 579999999999999999999999999999976542111 1 133444555566664 9999999999888
Q ss_pred EEcCCCcEEEEEc---------------CCCcEEecCeEEEeeCCCCCh
Q 018320 110 DVDSNGKVVAVNL---------------RDGNRLPTDMVVVGIGIRPNT 143 (358)
Q Consensus 110 ~~~~~g~v~~v~~---------------~~g~~i~~D~vi~a~G~~p~~ 143 (358)
.. ++.+..+.. .++.++.+|.||+|||.+|..
T Consensus 209 ~~--~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~ 255 (965)
T 2gag_A 209 YD--ANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERP 255 (965)
T ss_dssp ET--TTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECC
T ss_pred ec--CCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCC
Confidence 63 333222211 112368999999999987754
No 216
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.23 E-value=1.9e-06 Score=84.67 Aligned_cols=95 Identities=24% Similarity=0.388 Sum_probs=67.0
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCc-----------------------------------cCCH--
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR-----------------------------------LFTP-- 83 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~-----------------------------------~~~~-- 83 (358)
..+|+|||||+.|+.+|..|++.|.+|+|+++.+ +... .++.
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 82 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKA-LGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGTLDWPR 82 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---CCHHH
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCC-CCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCCcCHHH
Confidence 3589999999999999999999999999999873 2100 0111
Q ss_pred ----------HHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChh
Q 018320 84 ----------KIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 84 ----------~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 144 (358)
.+...+.+.+++.||+++.++. ..++ .. .+.+ +|+++.+|.+|+|+|.+|...
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~-~~i~---~~---~v~~-~g~~~~~d~lviAtGs~p~~p 145 (463)
T 2r9z_A 83 LVAGRDRYIGAINSFWDGYVERLGITRVDGHA-RFVD---AH---TIEV-EGQRLSADHIVIATGGRPIVP 145 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEEESCE-EEEE---TT---EEEE-TTEEEEEEEEEECCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCEEEEeEE-EEcc---CC---EEEE-CCEEEEcCEEEECCCCCCCCC
Confidence 1112234456778999998853 4443 22 2444 677899999999999887653
No 217
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.23 E-value=4.4e-06 Score=82.86 Aligned_cols=101 Identities=21% Similarity=0.268 Sum_probs=71.2
Q ss_pred CcEEEEcCcHHHHHHHHHHHhC---CCcEEEEeeCCcccC-----------------------------c--------cC
Q 018320 42 GNAVVIGGGYIGMECAASLVIN---KINVTMVFPEAHCMA-----------------------------R--------LF 81 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~---g~~Vtlv~~~~~~l~-----------------------------~--------~~ 81 (358)
.+|+|||||+.|+.+|..|++. |.+|+|+++.+ +.. . .+
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 81 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAKI 81 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------CB
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCCcc
Confidence 4799999999999999999999 99999999885 100 0 01
Q ss_pred CHH------------HHHHHHHHHHhCCCEEEcCCeeeEEEEcC--CCcEEEEEcCCCc--EEecCeEEEeeCCCCChh
Q 018320 82 TPK------------IASYYEEYYKSKGVKFVKGTVLSSFDVDS--NGKVVAVNLRDGN--RLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 82 ~~~------------~~~~~~~~l~~~gV~v~~~~~v~~i~~~~--~g~v~~v~~~~g~--~i~~D~vi~a~G~~p~~~ 144 (358)
+.. +...+.+.+++.||+++.++ ++.++..+ ++....+.+.+|+ ++.+|.+|+|+|.+|...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs~p~~p 159 (499)
T 1xdi_A 82 SLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGR-GELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASPRIL 159 (499)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESE-EEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCEEECCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCCC
Confidence 111 12224566778899999885 55553200 0123456667776 799999999999888654
No 218
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.23 E-value=4.8e-07 Score=97.45 Aligned_cols=94 Identities=21% Similarity=0.347 Sum_probs=72.0
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCC-cEEEEeeCCcccC-------c-cCCHHHHHHHHHHHHhCCCEEEcCCeeeEEEE
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKI-NVTMVFPEAHCMA-------R-LFTPKIASYYEEYYKSKGVKFVKGTVLSSFDV 111 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~-~Vtlv~~~~~~l~-------~-~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~ 111 (358)
+++|+|||||+.|+.+|..|++.|. +|+|+++.+.+.. . .++.+......+.+++.||++++++.+..
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~~ip~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~--- 263 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSE--- 263 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHTTTCEEEESCCBST---
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccccccCCcccCCHHHHHHHHHHHHHCCcEEEcccEecc---
Confidence 4689999999999999999999999 7999999865421 1 13456666667788999999999987631
Q ss_pred cCCCcEEEEEcCCCcEEecCeEEEeeCC-CCCh
Q 018320 112 DSNGKVVAVNLRDGNRLPTDMVVVGIGI-RPNT 143 (358)
Q Consensus 112 ~~~g~v~~v~~~~g~~i~~D~vi~a~G~-~p~~ 143 (358)
. .+.+.++.++.+|.||+|||. +|..
T Consensus 264 ---~---~v~~~~~~~~~~d~vvlAtGa~~p~~ 290 (1025)
T 1gte_A 264 ---N---EITLNTLKEEGYKAAFIGIGLPEPKT 290 (1025)
T ss_dssp ---T---SBCHHHHHHTTCCEEEECCCCCEECC
T ss_pred ---c---eEEhhhcCccCCCEEEEecCCCCCCC
Confidence 1 133445556889999999998 4754
No 219
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.22 E-value=4e-06 Score=82.22 Aligned_cols=93 Identities=19% Similarity=0.204 Sum_probs=66.1
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCccc--------------------------------Cc------cCCH
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM--------------------------------AR------LFTP 83 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l--------------------------------~~------~~~~ 83 (358)
.+++|||||+.|+.+|..|++.|.+|+++++. .+. .. .++.
T Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 84 (458)
T 1lvl_A 6 TTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ-ALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVASPRLDI 84 (458)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCCCCCCCH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCEEEEEccC-CCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccCCCccCH
Confidence 58999999999999999999999999999984 320 00 0111
Q ss_pred -HH-----------HHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCCh
Q 018320 84 -KI-----------ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNT 143 (358)
Q Consensus 84 -~~-----------~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 143 (358)
++ ...+.+.+++.||+++.++.+. ++ +. .+.+.+ +++.+|.+|+|||.+|..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~-~~---~~---~v~v~~-~~~~~d~lviATGs~p~~ 148 (458)
T 1lvl_A 85 GQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKV-LD---GK---QVEVDG-QRIQCEHLLLATGSSSVE 148 (458)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEE-EE---TT---EEEETT-EEEECSEEEECCCEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEE-cc---CC---EEEEee-EEEEeCEEEEeCCCCCCC
Confidence 11 1113356678899999887643 32 22 344544 789999999999998864
No 220
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.22 E-value=1.2e-05 Score=80.15 Aligned_cols=55 Identities=11% Similarity=0.209 Sum_probs=43.5
Q ss_pred HHHHHHHh-CCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCCh
Q 018320 88 YYEEYYKS-KGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNT 143 (358)
Q Consensus 88 ~~~~~l~~-~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 143 (358)
.+.+.+++ .||+++.+ +|++++.++++.+..+++.+|.++.+|.||.|+|..+..
T Consensus 180 ~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~ 235 (526)
T 2pyx_A 180 LLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSLL 235 (526)
T ss_dssp HHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCCC
T ss_pred HHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchHH
Confidence 34455566 79999999 699998755666667888888889999999999987653
No 221
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.22 E-value=4.2e-06 Score=82.56 Aligned_cols=97 Identities=22% Similarity=0.246 Sum_probs=68.9
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCccc---------------------------------------C--cc
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM---------------------------------------A--RL 80 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l---------------------------------------~--~~ 80 (358)
.+|+|||||+.|+.+|..|++.|.+|+|+++.+ +. + ..
T Consensus 12 ~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 90 (479)
T 2hqm_A 12 YDYLVIGGGSGGVASARRAASYGAKTLLVEAKA-LGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDKEHLT 90 (479)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSGGGCC
T ss_pred CCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC-cCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCcccccccccccCc
Confidence 589999999999999999999999999999864 10 0 00
Q ss_pred CCH------------HHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCc--EEecCeEEEeeCCCCChh
Q 018320 81 FTP------------KIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGN--RLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 81 ~~~------------~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~--~i~~D~vi~a~G~~p~~~ 144 (358)
++. .+...+.+.+++.||+++.++ +..+ +... ..+.+.+|+ ++.+|.+|+|+|.+|...
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i---~~~~-~~v~~~~g~~~~~~~d~lviAtGs~p~~p 163 (479)
T 2hqm_A 91 FNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGW-ARFN---KDGN-VEVQKRDNTTEVYSANHILVATGGKAIFP 163 (479)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEE-EEEC---TTSC-EEEEESSSCCEEEEEEEEEECCCEEECCC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEe---eCCE-EEEEeCCCcEEEEEeCEEEEcCCCCCCCC
Confidence 111 111233455677899999874 4444 2233 345566776 799999999999887654
No 222
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=98.22 E-value=3.3e-07 Score=90.16 Aligned_cols=91 Identities=14% Similarity=0.176 Sum_probs=69.3
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCC--CcEEEEeeCCccc--------Ccc-CCHHHHHHHHHHHHhCCCEEEcCCeeeE
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINK--INVTMVFPEAHCM--------ARL-FTPKIASYYEEYYKSKGVKFVKGTVLSS 108 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g--~~Vtlv~~~~~~l--------~~~-~~~~~~~~~~~~l~~~gV~v~~~~~v~~ 108 (358)
.+++++|||+|+.|+.+|..|++.| .+|+|+++.+.+. |.. ...++...+.+.+++.||+++.++.+.
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~- 83 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFYGNVEVG- 83 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTSTTEEEEBSCCBT-
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccCCCCccHHHHHHHHHHHHHhCCcEEEeeeEEe-
Confidence 3579999999999999999999998 9999999987764 211 123456667778888999999987652
Q ss_pred EEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCC
Q 018320 109 FDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRP 141 (358)
Q Consensus 109 i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p 141 (358)
. .+.+.+ .++.+|.||+|||..|
T Consensus 84 ----~-----~V~~~~-~~~~~d~lVlAtGs~~ 106 (460)
T 1cjc_A 84 ----R-----DVTVQE-LQDAYHAVVLSYGAED 106 (460)
T ss_dssp ----T-----TBCHHH-HHHHSSEEEECCCCCE
T ss_pred ----e-----EEEecc-ceEEcCEEEEecCcCC
Confidence 1 123333 3478999999999875
No 223
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.21 E-value=4.5e-06 Score=81.89 Aligned_cols=97 Identities=18% Similarity=0.163 Sum_probs=68.9
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCc-----------------------------------cCCHH--
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR-----------------------------------LFTPK-- 84 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~-----------------------------------~~~~~-- 84 (358)
.+++|||||+.|+.+|..|++.|.+|+|+++.+ +... .++.+
T Consensus 4 ~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~~-~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 82 (464)
T 2a8x_A 4 YDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKY-WGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDYGIA 82 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEECHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC-CCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccCHHHH
Confidence 479999999999999999999999999999872 1100 00110
Q ss_pred ----------HHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCC--cEEecCeEEEeeCCCCChh
Q 018320 85 ----------IASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDG--NRLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 85 ----------~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g--~~i~~D~vi~a~G~~p~~~ 144 (358)
+...+.+.+++.||+++.++.+. + ++.. ..+.+.+| +++.+|.+|+|+|.+|...
T Consensus 83 ~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~-i---d~~~-v~V~~~~G~~~~~~~d~lViAtG~~~~~~ 149 (464)
T 2a8x_A 83 YDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTF-A---DANT-LLVDLNDGGTESVTFDNAIIATGSSTRLV 149 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEE-S---SSSE-EEEEETTSCCEEEEEEEEEECCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-e---cCCe-EEEEeCCCceEEEEcCEEEECCCCCCCCC
Confidence 11223456777899999887543 2 2332 35666777 6899999999999887643
No 224
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.21 E-value=1.5e-06 Score=86.25 Aligned_cols=95 Identities=20% Similarity=0.342 Sum_probs=60.7
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCccc---------Cc-------------------------cCC-----
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM---------AR-------------------------LFT----- 82 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l---------~~-------------------------~~~----- 82 (358)
.+|+|||||+.|+.+|..|++.|.+|+|+++.+ +. |. .++
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~~ 81 (500)
T 1onf_A 3 YDLIVIGGGSGGMAAARRAARHNAKVALVEKSR-LGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTKFSFNLPLLV 81 (500)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-TTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCHHHHH
T ss_pred cCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC-cCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccCCccCHHHHH
Confidence 479999999999999999999999999999874 10 00 011
Q ss_pred -------HHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCC-------------CcEEecCeEEEeeCCCCC
Q 018320 83 -------PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRD-------------GNRLPTDMVVVGIGIRPN 142 (358)
Q Consensus 83 -------~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~-------------g~~i~~D~vi~a~G~~p~ 142 (358)
..+...+.+.+++.||+++.++. ..++ .. .+.+.+ +.++.+|.+|+|+|.+|.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~-~~id---~~---~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs~p~ 154 (500)
T 1onf_A 82 ERRDKYIQRLNNIYRQNLSKDKVDLYEGTA-SFLS---EN---RILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPV 154 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCEEEESCC-CCC--------------------------------CBSSEEECCCCCBC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCEEEEeEE-EEee---CC---EEEEEeccccccccccCCCceEEEeCEEEECCCCCCC
Confidence 11122234556788999998854 2332 11 222222 567999999999999887
Q ss_pred hh
Q 018320 143 TS 144 (358)
Q Consensus 143 ~~ 144 (358)
..
T Consensus 155 ~p 156 (500)
T 1onf_A 155 FP 156 (500)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 225
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.21 E-value=2.2e-06 Score=82.67 Aligned_cols=97 Identities=20% Similarity=0.207 Sum_probs=69.4
Q ss_pred CcEEEEcCcHHHHHHHHHHHhC--CCcEEEEeeCCc------------c-cCccC-------------------------
Q 018320 42 GNAVVIGGGYIGMECAASLVIN--KINVTMVFPEAH------------C-MARLF------------------------- 81 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~--g~~Vtlv~~~~~------------~-l~~~~------------------------- 81 (358)
.+|+|||||.+|+.+|..|+++ |.+|+|+++... + .+..+
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~s~~~~g~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 116 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEEGATILAPGVWTAQDIPAGQEAQAEWTREQLLGALGSGKTL 116 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTTSHHHHCCCEECGGGCCTTCHHHHHHHHHHHHTGGGSSCCC
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcchhccCCcceeecccCCchHHHHHHHHHHHHHHHhCCCCCC
Confidence 4799999999999999999999 999999998531 1 01000
Q ss_pred --------------------C----------------------------------HHHHHHHHHHHHhCCCEEEcCCeee
Q 018320 82 --------------------T----------------------------------PKIASYYEEYYKSKGVKFVKGTVLS 107 (358)
Q Consensus 82 --------------------~----------------------------------~~~~~~~~~~l~~~gV~v~~~~~v~ 107 (358)
+ ..+...+.+.+++.|++++.+++|+
T Consensus 117 ~~~~~g~l~~~~~~~~~g~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~v~~~~l~~~L~~~~~~~Gv~i~~~~~v~ 196 (405)
T 3c4n_A 117 EVEDRPLLHLLPAGEGSGLTPTLDALADFPEALALLDPARLPVARVDPRALTYRPGSLALLAAQQAIGQGAGLLLNTRAE 196 (405)
T ss_dssp CEEECCEEEEESSCCSSSCEEHHHHTTTCHHHHTTSCTTTSCEEEEETTCEEECHHHHHHHHHHHHHTTTCEEECSCEEE
T ss_pred cEEeeCeEEehhhHhHCCCCCHHHHHHhCCCccccccCCcceEEEEcCCCEEEcHHHHHHHHHHHHHHCCCEEEcCCEEE
Confidence 0 1244556667778899999999999
Q ss_pred ---------EEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCC
Q 018320 108 ---------SFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRP 141 (358)
Q Consensus 108 ---------~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p 141 (358)
+++.+ ++.+ .+.+.+| ++.+|.||+|+|...
T Consensus 197 ~~~g~~~~~~i~~~-~~~v-~v~~~~g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 197 LVPGGVRLHRLTVT-NTHQ-IVVHETR-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp EETTEEEEECBCC---------CBCCE-EEEEEEEEECCGGGH
T ss_pred eccccccccceEee-CCeE-EEEECCc-EEECCEEEECCCccH
Confidence 87642 3333 5666565 899999999999764
No 226
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.20 E-value=1.1e-05 Score=77.92 Aligned_cols=53 Identities=19% Similarity=0.337 Sum_probs=40.1
Q ss_pred HHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChhhh
Q 018320 90 EEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTSLF 146 (358)
Q Consensus 90 ~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~l~ 146 (358)
.+.+++.|+++++++.|++|+. +++.+ + ..+|+++.+|.||+++|......++
T Consensus 196 ~~~~~~~G~~i~~~~~V~~i~~-~~~~v--V-~~~g~~~~ad~Vv~a~~~~~~~~ll 248 (421)
T 3nrn_A 196 ERIIMENKGKILTRKEVVEINI-EEKKV--Y-TRDNEEYSFDVAISNVGVRETVKLI 248 (421)
T ss_dssp HHHHHTTTCEEESSCCEEEEET-TTTEE--E-ETTCCEEECSEEEECSCHHHHHHHH
T ss_pred HHHHHHCCCEEEcCCeEEEEEE-ECCEE--E-EeCCcEEEeCEEEECCCHHHHHHhc
Confidence 3445667999999999999986 44544 4 4678899999999999965444443
No 227
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.19 E-value=4.3e-06 Score=81.82 Aligned_cols=94 Identities=19% Similarity=0.352 Sum_probs=66.6
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCc------------------------------------cCCH--
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR------------------------------------LFTP-- 83 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~------------------------------------~~~~-- 83 (358)
.+++|||||+.|+.+|..|++.|.+|+|+++.+ +... .++.
T Consensus 5 ~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~~~~~~~ 83 (450)
T 1ges_A 5 YDYIAIGGGSGGIASINRAAMYGQKCALIEAKE-LGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFNWET 83 (450)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEEEECHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCC-CCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCCccCHHH
Confidence 579999999999999999999999999999873 2100 0010
Q ss_pred ----------HHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChh
Q 018320 84 ----------KIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 84 ----------~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 144 (358)
.+...+...+++.||+++.++. +.++ .. .+.+ +|+++.+|.+|+|+|.+|...
T Consensus 84 l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~-~~i~---~~---~v~~-~g~~~~~d~lviAtGs~p~~p 146 (450)
T 1ges_A 84 LIASRTAYIDRIHTSYENVLGKNNVDVIKGFA-RFVD---AK---TLEV-NGETITADHILIATGGRPSHP 146 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEEESCC-EEEE---TT---EEEE-TTEEEEEEEEEECCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEE-EEec---CC---EEEE-CCEEEEeCEEEECCCCCCCCC
Confidence 1112233455778999998854 4453 22 2444 678899999999999887653
No 228
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.19 E-value=3.9e-06 Score=82.85 Aligned_cols=97 Identities=20% Similarity=0.220 Sum_probs=67.7
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccC-----------------------------------ccCCHH--
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMA-----------------------------------RLFTPK-- 84 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~-----------------------------------~~~~~~-- 84 (358)
.+++|||||+.|+.+|..|++.|.+|+|+++.+.+.. ..++.+
T Consensus 7 ~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~~~~~~~~ 86 (482)
T 1ojt_A 7 YDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDIDML 86 (482)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCCHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCCccCHHHH
Confidence 4799999999999999999999999999998654310 001111
Q ss_pred ----------HHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCC------------cEEecCeEEEeeCCCCC
Q 018320 85 ----------IASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDG------------NRLPTDMVVVGIGIRPN 142 (358)
Q Consensus 85 ----------~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g------------~~i~~D~vi~a~G~~p~ 142 (358)
+...+.+.+++.||+++.++.+. ++ ++. ..+.+.+| .++.+|.+|+|+|.+|.
T Consensus 87 ~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~~---~~~-v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~p~ 161 (482)
T 1ojt_A 87 RAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQF-LD---PHH-LEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVT 161 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEE-EE---TTE-EEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEE-cc---CCE-EEEEecCCcccccccccCcceEEEcCEEEECCCCCCC
Confidence 11123455677899999887543 22 222 23444455 57999999999998876
Q ss_pred h
Q 018320 143 T 143 (358)
Q Consensus 143 ~ 143 (358)
.
T Consensus 162 ~ 162 (482)
T 1ojt_A 162 K 162 (482)
T ss_dssp C
T ss_pred C
Confidence 4
No 229
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.18 E-value=4.7e-06 Score=81.91 Aligned_cols=94 Identities=19% Similarity=0.217 Sum_probs=66.6
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCc----------------------------------cCCH-HH-
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR----------------------------------LFTP-KI- 85 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~----------------------------------~~~~-~~- 85 (358)
.+++|||||+.|+.+|..|++.|.+|+|+++.+ +... .++. .+
T Consensus 7 ~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 85 (464)
T 2eq6_A 7 YDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLKKLG 85 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCCEECHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCCCcCHHHHH
Confidence 579999999999999999999999999999875 1000 0111 11
Q ss_pred ----------HHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChh
Q 018320 86 ----------ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 86 ----------~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 144 (358)
...+.+.+++.||+++.++.+. ++ .. .+.+. |+++.+|.+|+|||.+|...
T Consensus 86 ~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~~---~~---~v~v~-g~~~~~d~lViATGs~p~~p 146 (464)
T 2eq6_A 86 GWRDQVVKKLTGGVGTLLKGNGVELLRGFARL-VG---PK---EVEVG-GERYGAKSLILATGSEPLEL 146 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCEEEESCEEE-EE---TT---EEEET-TEEEEEEEEEECCCEEECCB
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEE-cc---CC---EEEEc-cEEEEeCEEEEcCCCCCCCC
Confidence 1112445677899999887543 42 22 24444 67899999999999988653
No 230
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.17 E-value=1.8e-06 Score=88.89 Aligned_cols=87 Identities=21% Similarity=0.320 Sum_probs=66.6
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCc-----cC----C-HHHHHHHHHHHHhCCCEEEcCCeeeEEE
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR-----LF----T-PKIASYYEEYYKSKGVKFVKGTVLSSFD 110 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~-----~~----~-~~~~~~~~~~l~~~gV~v~~~~~v~~i~ 110 (358)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+.+... .+ + .+....+.+.+++.||++++++.++.
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~-- 450 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVTA-- 450 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCCCCS--
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHHHHHHHcCCEEEeCcEecH--
Confidence 478999999999999999999999999999998654211 01 1 23445566778888999998875421
Q ss_pred EcCCCcEEEEEcCCCcEE-ecCeEEEeeCCCCChh
Q 018320 111 VDSNGKVVAVNLRDGNRL-PTDMVVVGIGIRPNTS 144 (358)
Q Consensus 111 ~~~~g~v~~v~~~~g~~i-~~D~vi~a~G~~p~~~ 144 (358)
..+ .+|.||+|||.+|...
T Consensus 451 ---------------~~~~~~d~lviAtG~~p~~~ 470 (671)
T 1ps9_A 451 ---------------DQLQAFDETILASGIVPRTP 470 (671)
T ss_dssp ---------------SSSCCSSEEEECCCEEECCC
T ss_pred ---------------HHhhcCCEEEEccCCCcCCC
Confidence 123 8999999999987754
No 231
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.17 E-value=7.5e-07 Score=92.04 Aligned_cols=89 Identities=18% Similarity=0.216 Sum_probs=68.3
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccC---------cc-CCHHHHHHHHHHHHhC-CCEEEcCCeeeE
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMA---------RL-FTPKIASYYEEYYKSK-GVKFVKGTVLSS 108 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~---------~~-~~~~~~~~~~~~l~~~-gV~v~~~~~v~~ 108 (358)
..++|+|||||+.|+++|..|+++|.+|+|+++.+.+.. .. ...++...+.+.+.+. ||++++++.++
T Consensus 390 ~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~- 468 (690)
T 3k30_A 390 SDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQESALPGLSAWGRVKEYREAVLAELPNVEIYRESPMT- 468 (690)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHHHTSTTCGGGGHHHHHHHHHHHTCTTEEEESSCCCC-
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeeccCCCchhHHHHHHHHHHHHHHHcCCCEEEECCeec-
Confidence 357899999999999999999999999999999765421 10 1235566777778886 99999886532
Q ss_pred EEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCC
Q 018320 109 FDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPN 142 (358)
Q Consensus 109 i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~ 142 (358)
..++.++.+|.+|+|+|.+|.
T Consensus 469 -------------~~~~~~~~~d~lvlAtG~~~~ 489 (690)
T 3k30_A 469 -------------GDDIVEFGFEHVITATGATWR 489 (690)
T ss_dssp -------------HHHHHHTTCCEEEECCCEEEC
T ss_pred -------------HHHHhhcCCCEEEEcCCCccc
Confidence 123456889999999998854
No 232
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.17 E-value=1.1e-05 Score=80.15 Aligned_cols=56 Identities=23% Similarity=0.370 Sum_probs=45.0
Q ss_pred HHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCCh
Q 018320 87 SYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNT 143 (358)
Q Consensus 87 ~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~ 143 (358)
..+.+.+++.|++++.+ +|++++.++++.+..+++.+|+++.+|.||.|+|.....
T Consensus 177 ~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~ 232 (511)
T 2weu_A 177 RYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGLL 232 (511)
T ss_dssp HHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCCC
T ss_pred HHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchHH
Confidence 34455566689999999 999998756676677888889899999999999986543
No 233
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=98.17 E-value=6.3e-07 Score=88.11 Aligned_cols=89 Identities=18% Similarity=0.170 Sum_probs=68.1
Q ss_pred CCcEEEEcCcHHHHHHHHHHHh-C------CCcEEEEeeCCcccCc---------cCCHHHHHHHHHHHHhCCCEEEcCC
Q 018320 41 GGNAVVIGGGYIGMECAASLVI-N------KINVTMVFPEAHCMAR---------LFTPKIASYYEEYYKSKGVKFVKGT 104 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~-~------g~~Vtlv~~~~~~l~~---------~~~~~~~~~~~~~l~~~gV~v~~~~ 104 (358)
+++|+|||||+.|+.+|..|.+ . |.+|+|+++.+.+... ....++...+.+.+++.||+++.+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~p~~~~~~~~~~~~~~~~~~~~v~~~~~v 82 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGNV 82 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTSTTEEEEESC
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccccCCCCCCHHHHHHHHHHHHhcCCCEEEeeE
Confidence 5789999999999999999999 7 9999999998765421 1223566677777888899999885
Q ss_pred eeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCC
Q 018320 105 VLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIR 140 (358)
Q Consensus 105 ~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~ 140 (358)
.+ +. .+.+.++ ++.+|.||+|+|..
T Consensus 83 ~v------~~----~v~~~~~-~~~~d~lViAtG~~ 107 (456)
T 1lqt_A 83 VV------GE----HVQPGEL-SERYDAVIYAVGAQ 107 (456)
T ss_dssp CB------TT----TBCHHHH-HHHSSEEEECCCCC
T ss_pred EE------CC----EEEECCC-eEeCCEEEEeeCCC
Confidence 43 11 1334444 57899999999986
No 234
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.16 E-value=8.8e-06 Score=85.74 Aligned_cols=54 Identities=28% Similarity=0.445 Sum_probs=42.5
Q ss_pred HHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCC
Q 018320 86 ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRP 141 (358)
Q Consensus 86 ~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p 141 (358)
...+.+.+++.|++++.++.|++++. +++.+..+.+.+| ++.+|.||+|+|...
T Consensus 154 ~~~L~~~a~~~Gv~i~~~t~V~~i~~-~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 154 VQLLIKRTESAGVTYRGSTTVTGIEQ-SGGRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHcCCEEECCceEEEEEE-eCCEEEEEEECCc-EEECCEEEECCccch
Confidence 34455667788999999999999986 3455556777776 799999999999754
No 235
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.14 E-value=2e-06 Score=84.44 Aligned_cols=93 Identities=17% Similarity=0.248 Sum_probs=66.4
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccC-----------------------------------ccCCH---
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMA-----------------------------------RLFTP--- 83 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~-----------------------------------~~~~~--- 83 (358)
.+|+|||||+.|+.+|..|++.|.+|+|+|+.. +.. ..++.
T Consensus 6 ~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~~-~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 84 (463)
T 4dna_A 6 YDLFVIGGGSGGVRSGRLAAALGKKVAIAEEFR-YGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRFDWAKL 84 (463)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCCEECHHHH
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCEEEEEeCCC-CCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCCCcCHHHH
Confidence 479999999999999999999999999999842 110 00111
Q ss_pred ---------HHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEc-CCCcEEecCeEEEeeCCCCC
Q 018320 84 ---------KIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNL-RDGNRLPTDMVVVGIGIRPN 142 (358)
Q Consensus 84 ---------~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~-~~g~~i~~D~vi~a~G~~p~ 142 (358)
.+...+.+.+++.||+++.+ .+..+ +.. .+.+ .+++++.+|.+|+|+|.+|.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i---~~~---~v~~~~~~~~~~~d~lviAtG~~p~ 146 (463)
T 4dna_A 85 VAAKEQEIARLEGLYRKGLANAGAEILDT-RAELA---GPN---TVKLLASGKTVTAERIVIAVGGHPS 146 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCEEEES-CEEES---SSS---EEEETTTTEEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEe---eCC---EEEEecCCeEEEeCEEEEecCCCcc
Confidence 12233455567789999987 33333 222 3444 57788999999999998877
No 236
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.10 E-value=1.5e-05 Score=78.46 Aligned_cols=98 Identities=18% Similarity=0.290 Sum_probs=70.0
Q ss_pred cEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcc-------------cCcc-----------------------------
Q 018320 43 NAVVIGGGYIGMECAASLVINKINVTMVFPEAHC-------------MARL----------------------------- 80 (358)
Q Consensus 43 ~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~-------------l~~~----------------------------- 80 (358)
.|+|||+|..|+.+|..|++.|.+|+|+++...- +...
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~~ 80 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKRIDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTSE 80 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHHH
Confidence 4899999999999999999999999999986200 0000
Q ss_pred --------------C----------------------CHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcC-
Q 018320 81 --------------F----------------------TPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLR- 123 (358)
Q Consensus 81 --------------~----------------------~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~- 123 (358)
+ ..++...+.+.+++.||+++.++.+ ++.. +++.+..+...
T Consensus 81 ~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~-~~~~v~Gv~v~~ 158 (472)
T 2e5v_A 81 AKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPIIEDRLV-EIRV-KDGKVTGFVTEK 158 (472)
T ss_dssp HHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCEECCCEE-EEEE-ETTEEEEEEETT
T ss_pred HHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEEEECcEE-EEEE-eCCEEEEEEEEe
Confidence 0 0123344555566789999999999 9876 35555555442
Q ss_pred CCcEEecCeEEEeeCCCCC
Q 018320 124 DGNRLPTDMVVVGIGIRPN 142 (358)
Q Consensus 124 ~g~~i~~D~vi~a~G~~p~ 142 (358)
++.++.+|.||+|+|..+.
T Consensus 159 ~~g~~~a~~VVlAtGg~~~ 177 (472)
T 2e5v_A 159 RGLVEDVDKLVLATGGYSY 177 (472)
T ss_dssp TEEECCCSEEEECCCCCGG
T ss_pred CCCeEEeeeEEECCCCCcc
Confidence 3335789999999997653
No 237
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.10 E-value=3.6e-06 Score=83.37 Aligned_cols=98 Identities=23% Similarity=0.261 Sum_probs=66.7
Q ss_pred CcEEEEcCcHHHHHHHHHHHh-CCCcEEEEee--------CCcccCc---------------------------------
Q 018320 42 GNAVVIGGGYIGMECAASLVI-NKINVTMVFP--------EAHCMAR--------------------------------- 79 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~-~g~~Vtlv~~--------~~~~l~~--------------------------------- 79 (358)
.+++|||||+.|+.+|..|++ .|.+|+|+++ ...+...
T Consensus 4 ~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~ 83 (490)
T 1fec_A 4 YDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWELD 83 (490)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEECC
T ss_pred ccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCcccC
Confidence 479999999999999999999 9999999992 2222110
Q ss_pred ----cCCH-HH-----------HHHHHHHHHhC-CCEEEcCCeeeEEEEcCCCcEEEEEc---CCC---cEEecCeEEEe
Q 018320 80 ----LFTP-KI-----------ASYYEEYYKSK-GVKFVKGTVLSSFDVDSNGKVVAVNL---RDG---NRLPTDMVVVG 136 (358)
Q Consensus 80 ----~~~~-~~-----------~~~~~~~l~~~-gV~v~~~~~v~~i~~~~~g~v~~v~~---~~g---~~i~~D~vi~a 136 (358)
.++. ++ ...+.+.+++. ||+++.++ ++.++ ... ..+.. .+| +++.+|.+|+|
T Consensus 84 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~-~~~i~---~~~-v~v~~~~~~~g~~~~~~~~d~lviA 158 (490)
T 1fec_A 84 RESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGF-GALQD---NHT-VLVRESADPNSAVLETLDTEYILLA 158 (490)
T ss_dssp GGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESE-EEEEE---TTE-EEEESSSSTTSCEEEEEEEEEEEEC
T ss_pred CcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeE-EEEee---CCE-EEEEeeccCCCCceEEEEcCEEEEe
Confidence 0111 11 12234456677 99999885 55554 222 23332 366 67999999999
Q ss_pred eCCCCChh
Q 018320 137 IGIRPNTS 144 (358)
Q Consensus 137 ~G~~p~~~ 144 (358)
||.+|...
T Consensus 159 tGs~p~~p 166 (490)
T 1fec_A 159 TGSWPQHL 166 (490)
T ss_dssp CCEEECCC
T ss_pred CCCCCCCC
Confidence 99887653
No 238
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.08 E-value=2.3e-05 Score=77.70 Aligned_cols=55 Identities=15% Similarity=0.082 Sum_probs=41.4
Q ss_pred HHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEc---CCCc--EEecCeEEEeeCCCC
Q 018320 85 IASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNL---RDGN--RLPTDMVVVGIGIRP 141 (358)
Q Consensus 85 ~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~---~~g~--~i~~D~vi~a~G~~p 141 (358)
+...+.+.+++.|++++++++|+++..++ .+..+++ .+|+ ++.+|.||.|+|...
T Consensus 151 l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~--~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 151 LVLANAQMVVRKGGEVLTRTRATSARREN--GLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEEEET--TEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred HHHHHHHHHHHcCCEEEcCcEEEEEEEeC--CEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 34455666778899999999999998643 3445665 3565 799999999999754
No 239
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.07 E-value=3.3e-06 Score=83.75 Aligned_cols=96 Identities=26% Similarity=0.282 Sum_probs=65.0
Q ss_pred CcEEEEcCcHHHHHHHHHHHh-CCCcEEEEee--------CCcccCc---------------------------------
Q 018320 42 GNAVVIGGGYIGMECAASLVI-NKINVTMVFP--------EAHCMAR--------------------------------- 79 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~-~g~~Vtlv~~--------~~~~l~~--------------------------------- 79 (358)
.+++|||||+.|+.+|..|++ .|.+|+|+++ ...+...
T Consensus 8 ~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~ 87 (495)
T 2wpf_A 8 FDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWEFD 87 (495)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTTEECC
T ss_pred cCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcCcccC
Confidence 579999999999999999999 9999999992 2222100
Q ss_pred ----cCCH-HHH-----------HHHHHHHHhC-CCEEEcCCeeeEEEEcCCCcEEEEEcC---C-----CcEEecCeEE
Q 018320 80 ----LFTP-KIA-----------SYYEEYYKSK-GVKFVKGTVLSSFDVDSNGKVVAVNLR---D-----GNRLPTDMVV 134 (358)
Q Consensus 80 ----~~~~-~~~-----------~~~~~~l~~~-gV~v~~~~~v~~i~~~~~g~v~~v~~~---~-----g~~i~~D~vi 134 (358)
.++. ++. ..+...+++. ||+++.++ ++.++ .. .+.+. + ++++.+|.+|
T Consensus 88 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~-~~~i~---~~---~v~v~~~~~~~~~~~~~~~~d~lV 160 (495)
T 2wpf_A 88 GSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGW-GSLES---KN---VVVVRETADPKSAVKERLQADHIL 160 (495)
T ss_dssp GGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEESE-EEEEE---TT---EEEEESSSSTTSCEEEEEEEEEEE
T ss_pred CcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeE-EEEee---CC---EEEEeecCCccCCCCeEEEcCEEE
Confidence 0111 111 1223445677 99999885 55553 22 23333 4 6689999999
Q ss_pred EeeCCCCChh
Q 018320 135 VGIGIRPNTS 144 (358)
Q Consensus 135 ~a~G~~p~~~ 144 (358)
+|||.+|...
T Consensus 161 iATGs~p~~p 170 (495)
T 2wpf_A 161 LATGSWPQMP 170 (495)
T ss_dssp ECCCEEECCC
T ss_pred EeCCCCcCCC
Confidence 9999887653
No 240
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.07 E-value=1e-05 Score=79.54 Aligned_cols=97 Identities=21% Similarity=0.234 Sum_probs=67.5
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCccc----------------------------------Cc--------
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM----------------------------------AR-------- 79 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l----------------------------------~~-------- 79 (358)
-+|+|||||+.|+.+|..|++.|.+|+|+|+.+.+. ..
T Consensus 4 ~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~~~ 83 (476)
T 3lad_A 4 FDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTGEV 83 (476)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECSCC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccCCC
Confidence 479999999999999999999999999999875110 00
Q ss_pred cCCH------------HHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCC--cEEecCeEEEeeCCCCCh
Q 018320 80 LFTP------------KIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDG--NRLPTDMVVVGIGIRPNT 143 (358)
Q Consensus 80 ~~~~------------~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g--~~i~~D~vi~a~G~~p~~ 143 (358)
.++. .+...+...+++.||+++.+.... + +... ..+...+| .++.+|.+|+|+|.+|..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~-~---~~~~-~~v~~~~g~~~~~~~d~lvlAtG~~p~~ 156 (476)
T 3lad_A 84 AIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKL-L---AGKK-VEVTAADGSSQVLDTENVILASGSKPVE 156 (476)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEE-C---STTC-EEEECTTSCEEEECCSCEEECCCEEECC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-e---cCCE-EEEEcCCCceEEEEcCEEEEcCCCCCCC
Confidence 0010 112223345667799999875432 2 2232 35666777 579999999999988763
No 241
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.04 E-value=6.4e-06 Score=81.12 Aligned_cols=97 Identities=15% Similarity=0.254 Sum_probs=67.2
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccC-----------------------------------ccCCH--
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMA-----------------------------------RLFTP-- 83 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~-----------------------------------~~~~~-- 83 (358)
..+|+|||||+.|+.+|..|++.|.+|+|+++.. +.. ..++.
T Consensus 20 ~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~-~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 98 (478)
T 3dk9_A 20 SYDYLVIGGGSGGLASARRAAELGARAAVVESHK-LGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNWRV 98 (478)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCCCHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-CCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCccCHHH
Confidence 3689999999999999999999999999999764 100 00111
Q ss_pred ----------HHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCChh
Q 018320 84 ----------KIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 84 ----------~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~~~ 144 (358)
.+...+...+++.||+++.+. +..+. ... ..+. .+++++.+|.+|+|+|.+|...
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~~~--~~~--~~v~-~~g~~~~~d~lviAtG~~p~~p 163 (478)
T 3dk9_A 99 IKEKRDAYVSRLNAIYQNNLTKSHIEIIRGH-AAFTS--DPK--PTIE-VSGKKYTAPHILIATGGMPSTP 163 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEEESC-EEECS--CSS--CEEE-ETTEEEECSCEEECCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEee--CCe--EEEE-ECCEEEEeeEEEEccCCCCCCC
Confidence 122334455677899999875 22222 122 1233 4677899999999999887654
No 242
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.04 E-value=1.6e-05 Score=79.26 Aligned_cols=98 Identities=14% Similarity=0.126 Sum_probs=66.7
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCC--------cccC-----------------------------------
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEA--------HCMA----------------------------------- 78 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~--------~~l~----------------------------------- 78 (358)
.+|+|||||+.|+.+|..|++.|.+|+||++.+ .+..
T Consensus 33 ~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~~~~ 112 (519)
T 3qfa_A 33 YDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKVEE 112 (519)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBCCCS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCcccCC
Confidence 489999999999999999999999999999843 1100
Q ss_pred -ccCCHH------------HHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCc--EEecCeEEEeeCCCCCh
Q 018320 79 -RLFTPK------------IASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGN--RLPTDMVVVGIGIRPNT 143 (358)
Q Consensus 79 -~~~~~~------------~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~--~i~~D~vi~a~G~~p~~ 143 (358)
..++.. +...+...+++.+|+++.+. +..+. ... ..+...+|+ ++.+|.+|+|||.+|..
T Consensus 113 ~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~-a~~~d---~~~-v~v~~~~g~~~~i~~d~lViATGs~p~~ 187 (519)
T 3qfa_A 113 TVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAY-GQFIG---PHR-IKATNNKGKEKIYSAERFLIATGERPRY 187 (519)
T ss_dssp SCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSE-EEEEE---TTE-EEEECTTCCCCEEEEEEEEECCCEEECC
T ss_pred cCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEee---CCE-EEEEcCCCCEEEEECCEEEEECCCCcCC
Confidence 001111 11122335667899999764 33343 222 346666664 79999999999988765
Q ss_pred h
Q 018320 144 S 144 (358)
Q Consensus 144 ~ 144 (358)
.
T Consensus 188 p 188 (519)
T 3qfa_A 188 L 188 (519)
T ss_dssp C
T ss_pred C
Confidence 4
No 243
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.02 E-value=2.8e-06 Score=81.15 Aligned_cols=88 Identities=17% Similarity=0.164 Sum_probs=68.2
Q ss_pred CcEEEEcCcHHHHHHHHHHHhC--CCcEEEEeeCCccc-----------------------Cc-----------------
Q 018320 42 GNAVVIGGGYIGMECAASLVIN--KINVTMVFPEAHCM-----------------------AR----------------- 79 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~--g~~Vtlv~~~~~~l-----------------------~~----------------- 79 (358)
++|+|||||++|+.+|..|++. |.+|+|+|+.+.+. ..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVHH 80 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEES
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEeC
Confidence 3799999999999999999999 99999999875440 00
Q ss_pred --------------cCCHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCC
Q 018320 80 --------------LFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPN 142 (358)
Q Consensus 80 --------------~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~ 142 (358)
....++.+.+.+.+++.|++++++++|++++. . +++.+|.||.|.|..+.
T Consensus 81 g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~-----------~~~~ad~vV~AdG~~S~ 144 (381)
T 3c4a_A 81 NEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGE--L-----------PLADYDLVVLANGVNHK 144 (381)
T ss_dssp SSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGG--C-----------CGGGCSEEEECCGGGGG
T ss_pred CeeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchh--c-----------ccccCCEEEECCCCCch
Confidence 00135667777778888999999999888742 1 13689999999997653
No 244
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.01 E-value=2.2e-05 Score=79.07 Aligned_cols=52 Identities=23% Similarity=0.202 Sum_probs=39.6
Q ss_pred HHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCC---C--cEEecCeEEEeeCCC
Q 018320 88 YYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRD---G--NRLPTDMVVVGIGIR 140 (358)
Q Consensus 88 ~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~---g--~~i~~D~vi~a~G~~ 140 (358)
.+.+.+++.|++++++++|+++.. +++.+..+++.+ | .++.+|.||.|+|..
T Consensus 175 ~L~~~a~~~G~~i~~~~~V~~l~~-~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~ 231 (561)
T 3da1_A 175 EIMKEAVARGAVALNYMKVESFIY-DQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPW 231 (561)
T ss_dssp HHHHHHHHTTCEEEESEEEEEEEE-ETTEEEEEEEEETTTCCEEEEEEEEEEECCGGG
T ss_pred HHHHHHHHcCCEEEcCCEEEEEEE-cCCeEEEEEEEEcCCCceEEEECCEEEECCCcc
Confidence 344556778999999999999987 455555566543 3 478999999999964
No 245
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.01 E-value=1.7e-05 Score=77.14 Aligned_cols=53 Identities=25% Similarity=0.440 Sum_probs=40.8
Q ss_pred HHHHHHHHhCCCEEEcCCeeeEEEEc--------------CCCcEEEEEcCCCcEE--ecCeEEEeeCCC
Q 018320 87 SYYEEYYKSKGVKFVKGTVLSSFDVD--------------SNGKVVAVNLRDGNRL--PTDMVVVGIGIR 140 (358)
Q Consensus 87 ~~~~~~l~~~gV~v~~~~~v~~i~~~--------------~~g~v~~v~~~~g~~i--~~D~vi~a~G~~ 140 (358)
..+.+.+++.|++++.+++|++++.+ +++.+..+.+.+| ++ .+|.||+|+|..
T Consensus 185 ~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~ 253 (448)
T 3axb_A 185 DYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVW 253 (448)
T ss_dssp HHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGG
T ss_pred HHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcC
Confidence 34455667789999999999999762 2345556777777 68 999999999965
No 246
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.00 E-value=2.2e-06 Score=89.12 Aligned_cols=88 Identities=18% Similarity=0.184 Sum_probs=59.5
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCcc--------CC--HHHHHHHHHHHHhC------CCEEEcCC
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARL--------FT--PKIASYYEEYYKSK------GVKFVKGT 104 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~--------~~--~~~~~~~~~~l~~~------gV~v~~~~ 104 (358)
.++|+|||||+.|+++|..|+++|.+|+|+++.+.+.... +. ..+.+.+.+.++.. ++++..++
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~~~pg~~~~~~~~~~~~~~i~~~~~~~~~~v~i~~~~ 468 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVAALPGLGEWSYHRDYRETQITKLLKKNKESQLALGQK 468 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHTTSTTCGGGHHHHHHHHHHHHHHHHHSTTCEEECSCC
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeecccCCChHHHHHHHHHHHHHHHHhhcccCCceEEEeCe
Confidence 5789999999999999999999999999999987643210 10 12333333333322 45544332
Q ss_pred eeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCC
Q 018320 105 VLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPN 142 (358)
Q Consensus 105 ~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~ 142 (358)
. +.+.++.++.+|.||+|||..|.
T Consensus 469 ~--------------v~~~~~~~~~~d~vviAtG~~~~ 492 (729)
T 1o94_A 469 P--------------MTADDVLQYGADKVIIATGARWN 492 (729)
T ss_dssp C--------------CCHHHHHTSCCSEEEECCCEEEC
T ss_pred E--------------EehhhccccCCCEEEEcCCCCcc
Confidence 1 23334556889999999998854
No 247
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.97 E-value=2.5e-05 Score=79.87 Aligned_cols=102 Identities=22% Similarity=0.271 Sum_probs=75.2
Q ss_pred CcEEEEcCcHHHHHHHHHHHh-CCCcEEEEeeCCcccC------------------------------------------
Q 018320 42 GNAVVIGGGYIGMECAASLVI-NKINVTMVFPEAHCMA------------------------------------------ 78 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~-~g~~Vtlv~~~~~~l~------------------------------------------ 78 (358)
.+|+|||||++|+.+|..|++ .|.+|+|+|+.+.+..
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 112 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPDPG 112 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEECTT
T ss_pred CcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCCCC
Confidence 479999999999999999999 9999999998643200
Q ss_pred --c---------------------cCC-HHHHHHHHHHHHhCCC--EEEcCCeeeEEEEcCC--CcEEEEEcC------C
Q 018320 79 --R---------------------LFT-PKIASYYEEYYKSKGV--KFVKGTVLSSFDVDSN--GKVVAVNLR------D 124 (358)
Q Consensus 79 --~---------------------~~~-~~~~~~~~~~l~~~gV--~v~~~~~v~~i~~~~~--g~v~~v~~~------~ 124 (358)
. .++ ..+...+.+.+++.|+ +++.++++++++.+++ +....+++. +
T Consensus 113 ~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~ 192 (639)
T 2dkh_A 113 QPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHA 192 (639)
T ss_dssp STTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGT
T ss_pred CCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCC
Confidence 0 001 2455666777888876 9999999999987543 112334443 4
Q ss_pred C--cEEecCeEEEeeCCCCCh
Q 018320 125 G--NRLPTDMVVVGIGIRPNT 143 (358)
Q Consensus 125 g--~~i~~D~vi~a~G~~p~~ 143 (358)
| +++.+|.||.|.|.++..
T Consensus 193 G~~~~i~a~~vVgADG~~S~v 213 (639)
T 2dkh_A 193 GQIETVQARYVVGCDGARSNV 213 (639)
T ss_dssp TCEEEEEEEEEEECCCTTCHH
T ss_pred CCeEEEEeCEEEECCCcchHH
Confidence 5 579999999999987653
No 248
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.94 E-value=3.3e-05 Score=77.54 Aligned_cols=97 Identities=20% Similarity=0.300 Sum_probs=69.5
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCc------------------------------------------
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR------------------------------------------ 79 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~------------------------------------------ 79 (358)
.+|+|||||++|+-+|..|++.|.+|+|+|+.+.+...
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 106 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVTRV 106 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEESSB
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEeccC
Confidence 47999999999999999999999999999986432100
Q ss_pred ---c---C---------------------C-HHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCC---C--c
Q 018320 80 ---L---F---------------------T-PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRD---G--N 126 (358)
Q Consensus 80 ---~---~---------------------~-~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~---g--~ 126 (358)
. + + ..+.+.+.+.+++. +++++++++++.++++ + .+++.+ | .
T Consensus 107 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~-v-~v~~~~~~~G~~~ 181 (549)
T 2r0c_A 107 GGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER---LRTRSRLDSFEQRDDH-V-RATITDLRTGATR 181 (549)
T ss_dssp TSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG---EECSEEEEEEEECSSC-E-EEEEEETTTCCEE
T ss_pred CCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh---cccCcEEEEEEEeCCE-E-EEEEEECCCCCEE
Confidence 0 0 0 12334444555444 8889999999875554 3 344443 6 4
Q ss_pred EEecCeEEEeeCCCCCh
Q 018320 127 RLPTDMVVVGIGIRPNT 143 (358)
Q Consensus 127 ~i~~D~vi~a~G~~p~~ 143 (358)
++.+|.||.|.|.++..
T Consensus 182 ~i~a~~vVgADG~~S~v 198 (549)
T 2r0c_A 182 AVHARYLVACDGASSPT 198 (549)
T ss_dssp EEEEEEEEECCCTTCHH
T ss_pred EEEeCEEEECCCCCcHH
Confidence 79999999999987653
No 249
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.93 E-value=7e-05 Score=73.89 Aligned_cols=98 Identities=19% Similarity=0.155 Sum_probs=65.7
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCC--------ccc------------------------------------
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEA--------HCM------------------------------------ 77 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~--------~~l------------------------------------ 77 (358)
-+++|||||+.|+.+|..|++.|.+|+||++.+ .+.
T Consensus 7 ~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~~~ 86 (488)
T 3dgz_A 7 FDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEVAQ 86 (488)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCCCS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCcccCC
Confidence 479999999999999999999999999999621 110
Q ss_pred CccCCH-HH-----------HHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCC--cEEecCeEEEeeCCCCCh
Q 018320 78 ARLFTP-KI-----------ASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDG--NRLPTDMVVVGIGIRPNT 143 (358)
Q Consensus 78 ~~~~~~-~~-----------~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g--~~i~~D~vi~a~G~~p~~ 143 (358)
+..++. .+ ...+...+++.+|+++.+. +..+ +... ..+...+| .++.+|.+|+|||.+|..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~-~~~~---~~~~-v~v~~~~g~~~~~~~d~lViATGs~p~~ 161 (488)
T 3dgz_A 87 PVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIK-ASFV---DEHT-VRGVDKGGKATLLSAEHIVIATGGRPRY 161 (488)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCE-EEES---SSSE-EEEECTTSCEEEEEEEEEEECCCEEECC
T ss_pred cCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEc---cCCe-EEEEeCCCceEEEECCEEEEcCCCCCCC
Confidence 001121 11 1123345667899998663 3222 2222 35666666 479999999999988764
Q ss_pred h
Q 018320 144 S 144 (358)
Q Consensus 144 ~ 144 (358)
.
T Consensus 162 p 162 (488)
T 3dgz_A 162 P 162 (488)
T ss_dssp C
T ss_pred C
Confidence 3
No 250
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.90 E-value=5.8e-05 Score=76.65 Aligned_cols=98 Identities=12% Similarity=0.174 Sum_probs=71.0
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCC--CcEEEEeeCCcccC-------------------------------ccCC------
Q 018320 42 GNAVVIGGGYIGMECAASLVINK--INVTMVFPEAHCMA-------------------------------RLFT------ 82 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g--~~Vtlv~~~~~~l~-------------------------------~~~~------ 82 (358)
-.|+|||+|..|+-+|..|++.| .+|+|+++.+.... ...+
T Consensus 6 ~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v~~ 85 (602)
T 1kf6_A 6 ADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVDY 85 (602)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHHHHH
Confidence 37999999999999999999999 99999998642200 0001
Q ss_pred ------------------------------------------------HHHHHHHHHHHHhCC-CEEEcCCeeeEEEEcC
Q 018320 83 ------------------------------------------------PKIASYYEEYYKSKG-VKFVKGTVLSSFDVDS 113 (358)
Q Consensus 83 ------------------------------------------------~~~~~~~~~~l~~~g-V~v~~~~~v~~i~~~~ 113 (358)
..+...+.+.+++.| |+++.++.++++.. +
T Consensus 86 ~~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~-~ 164 (602)
T 1kf6_A 86 FVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILV-D 164 (602)
T ss_dssp HHHHHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEETEEEEEEEE-E
T ss_pred HHHHHHHHHHHHHHcCCCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEeCCEEEEEEE-e
Confidence 122333444555677 99999999999986 3
Q ss_pred CCcEEEEE---cCCCc--EEecCeEEEeeCCC
Q 018320 114 NGKVVAVN---LRDGN--RLPTDMVVVGIGIR 140 (358)
Q Consensus 114 ~g~v~~v~---~~~g~--~i~~D~vi~a~G~~ 140 (358)
++++..+. +.+|+ .+.++.||+|+|..
T Consensus 165 ~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 196 (602)
T 1kf6_A 165 DGHVRGLVAMNMMEGTLVQIRANAVVMATGGA 196 (602)
T ss_dssp TTEEEEEEEEETTTTEEEEEECSCEEECCCCC
T ss_pred CCEEEEEEEEEcCCCcEEEEEcCeEEECCCCC
Confidence 56554443 35676 68999999999953
No 251
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.89 E-value=7e-05 Score=73.79 Aligned_cols=99 Identities=23% Similarity=0.336 Sum_probs=65.8
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeC---C----c--c--------------------------------cC-
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPE---A----H--C--------------------------------MA- 78 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~---~----~--~--------------------------------l~- 78 (358)
..+|+|||||+.|+.+|..|++.|.+|+||++. + . + +.
T Consensus 9 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~ 88 (483)
T 3dgh_A 9 DYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGWNV 88 (483)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCccc
Confidence 358999999999999999999999999999831 1 0 0 00
Q ss_pred ---ccCCH-HHH-----------HHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCc-EEecCeEEEeeCCCCC
Q 018320 79 ---RLFTP-KIA-----------SYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGN-RLPTDMVVVGIGIRPN 142 (358)
Q Consensus 79 ---~~~~~-~~~-----------~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~-~i~~D~vi~a~G~~p~ 142 (358)
..++. .+. ..+...+++.+|+++.+.. .-+. ... ..+.+.+|. ++.+|.+|+|||.+|.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a-~~~~---~~~-v~v~~~~g~~~~~~d~lviATGs~p~ 163 (483)
T 3dgh_A 89 DDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLG-SFVD---SHT-LLAKLKSGERTITAQTFVIAVGGRPR 163 (483)
T ss_dssp CCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEE-EEEE---TTE-EEEECTTCCEEEEEEEEEECCCEEEC
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEE-EEcc---CCE-EEEEeCCCeEEEEcCEEEEeCCCCcC
Confidence 01121 111 1122346678999987643 2222 222 356666774 7999999999998876
Q ss_pred hh
Q 018320 143 TS 144 (358)
Q Consensus 143 ~~ 144 (358)
..
T Consensus 164 ~p 165 (483)
T 3dgh_A 164 YP 165 (483)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 252
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=97.89 E-value=0.00011 Score=74.28 Aligned_cols=52 Identities=12% Similarity=0.098 Sum_probs=38.9
Q ss_pred HHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEc---CCCc--EEecCeEEEeeCCC
Q 018320 89 YEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNL---RDGN--RLPTDMVVVGIGIR 140 (358)
Q Consensus 89 ~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~---~~g~--~i~~D~vi~a~G~~ 140 (358)
+.+.+++.||++++++.++++..++++++..+.. .+|+ .+.++.||+|+|..
T Consensus 149 L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~ 205 (588)
T 2wdq_A 149 LYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGA 205 (588)
T ss_dssp HHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCC
T ss_pred HHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCC
Confidence 3444556799999999999998743566665553 4565 58999999999963
No 253
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.85 E-value=8e-05 Score=77.71 Aligned_cols=63 Identities=19% Similarity=0.270 Sum_probs=47.3
Q ss_pred CCCCCCeEEecCHHHHHHHHHHHhcC---------------------CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEee
Q 018320 14 GSDAENVCYLRDLADANRLVNVMKSC---------------------SGGNAVVIGGGYIGMECAASLVINKINVTMVFP 72 (358)
Q Consensus 14 G~~~~~v~~l~~~~da~~i~~~l~~~---------------------~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~ 72 (358)
+.+.++++.+++..+...++..+... ...+|+|||+|.+|+.+|..|++.|.+|+|+|+
T Consensus 288 ~~~~r~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~ 367 (776)
T 4gut_A 288 HIIVRGLVRIRCVQEVERILYFMTRKGLINTGVLSVGADQYLLPKDYHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEA 367 (776)
T ss_dssp GCCCSSTHHHHHHHHHHHHHHHHHHHTSSSCTTCCCCGGGCSSCGGGTSCEEEEECCSHHHHHHHHHHHHHTCEEEEECS
T ss_pred hcccccccccccHHHHHHHHHHHHHhhhhhcccccccccccCCCCCCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEec
Confidence 44556666666666666666554321 135899999999999999999999999999998
Q ss_pred CCcc
Q 018320 73 EAHC 76 (358)
Q Consensus 73 ~~~~ 76 (358)
.+++
T Consensus 368 ~~~~ 371 (776)
T 4gut_A 368 KDRI 371 (776)
T ss_dssp SSSS
T ss_pred ccce
Confidence 6543
No 254
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.82 E-value=0.00011 Score=74.25 Aligned_cols=34 Identities=21% Similarity=0.331 Sum_probs=31.3
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
..+|+|||||.+|+.+|..|+++|.+|+|+|+.+
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~ 65 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQD 65 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4689999999999999999999999999999753
No 255
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.78 E-value=0.00011 Score=74.28 Aligned_cols=99 Identities=12% Similarity=0.187 Sum_probs=65.1
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeC-Cc-------cc----------------------------------C
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPE-AH-------CM----------------------------------A 78 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~-~~-------~l----------------------------------~ 78 (358)
..+|+|||||+.|+.+|..|++.|.+|+++++. +. +. +
T Consensus 107 ~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g~~~~ 186 (598)
T 2x8g_A 107 DYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGWSLD 186 (598)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred cccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCCcccc
Confidence 458999999999999999999999999999963 21 10 0
Q ss_pred c---cCC-HHHHHHH-----------HHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCC--cEEecCeEEEeeCCCC
Q 018320 79 R---LFT-PKIASYY-----------EEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDG--NRLPTDMVVVGIGIRP 141 (358)
Q Consensus 79 ~---~~~-~~~~~~~-----------~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g--~~i~~D~vi~a~G~~p 141 (358)
. ..+ +++.+.+ ...+++.+|+++.+. ...+. ... ..+...+| .++.+|.||+|||.+|
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~-~~~~~---~~~-v~v~~~~g~~~~~~~d~lviAtGs~p 261 (598)
T 2x8g_A 187 RSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAK-GRLIS---PHE-VQITDKNQKVSTITGNKIILATGERP 261 (598)
T ss_dssp GGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSE-EEEEE---TTE-EEEECTTCCEEEEEEEEEEECCCEEE
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEE-EEEcC---CCE-EEEEeCCCCeEEEEeCEEEEeCCCCC
Confidence 0 001 1121121 223567789988653 33343 122 34555666 4699999999999887
Q ss_pred Chh
Q 018320 142 NTS 144 (358)
Q Consensus 142 ~~~ 144 (358)
...
T Consensus 262 ~~p 264 (598)
T 2x8g_A 262 KYP 264 (598)
T ss_dssp CCC
T ss_pred CCC
Confidence 654
No 256
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=97.75 E-value=0.00018 Score=72.05 Aligned_cols=33 Identities=21% Similarity=0.300 Sum_probs=30.5
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCc
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 75 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~ 75 (358)
-.|+|||+|..|+-+|..|++ |.+|+|+++.+.
T Consensus 9 ~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~ 41 (540)
T 1chu_A 9 CDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPV 41 (540)
T ss_dssp CSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCT
T ss_pred CCEEEECccHHHHHHHHHHhc-CCcEEEEECCCC
Confidence 479999999999999999999 999999998754
No 257
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.72 E-value=4e-05 Score=75.85 Aligned_cols=33 Identities=21% Similarity=0.236 Sum_probs=31.0
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
.+++|||||+.|+.+|..|++.|.+|+|+++.+
T Consensus 9 ~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~ 41 (492)
T 3ic9_A 9 VDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA 41 (492)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 479999999999999999999999999999864
No 258
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.68 E-value=0.00017 Score=69.96 Aligned_cols=40 Identities=25% Similarity=0.341 Sum_probs=33.5
Q ss_pred CEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCC
Q 018320 98 VKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGI 139 (358)
Q Consensus 98 V~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~ 139 (358)
+++++++.|++|+.++++ ..|++.+|+++.+|.||++++.
T Consensus 248 ~~i~~~~~V~~i~~~~~~--~~v~~~~g~~~~ad~vi~a~p~ 287 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSGSC--YSLELDNGVTLDADSVIVTAPH 287 (470)
T ss_dssp EEEECSCCEEEEEECSSS--EEEEESSSCEEEESEEEECSCH
T ss_pred CEEEeCCceEEEEEcCCe--EEEEECCCCEEECCEEEECCCH
Confidence 489999999999875444 4578889989999999999874
No 259
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=97.62 E-value=4.5e-05 Score=66.87 Aligned_cols=34 Identities=21% Similarity=0.286 Sum_probs=32.1
Q ss_pred cEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcc
Q 018320 43 NAVVIGGGYIGMECAASLVINKINVTMVFPEAHC 76 (358)
Q Consensus 43 ~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~ 76 (358)
.|+|||||++|+.+|..|++.|.+|+|+|+++.+
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 6999999999999999999999999999998765
No 260
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=97.62 E-value=0.00029 Score=71.67 Aligned_cols=32 Identities=31% Similarity=0.346 Sum_probs=30.3
Q ss_pred cEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 43 NAVVIGGGYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 43 ~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
.|+|||+|.+|+-+|..|++.|.+|+|+++.+
T Consensus 20 DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~ 51 (621)
T 2h88_A 20 DAVVVGAGGAGLRAAFGLSEAGFNTACVTKLF 51 (621)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CEEEECccHHHHHHHHHHHHCCCcEEEEeccC
Confidence 79999999999999999999999999999864
No 261
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.60 E-value=0.00028 Score=72.39 Aligned_cols=33 Identities=18% Similarity=0.360 Sum_probs=30.5
Q ss_pred CcEEEEcCcHHHHHHHHHHHh-----CCCcEEEEeeCC
Q 018320 42 GNAVVIGGGYIGMECAASLVI-----NKINVTMVFPEA 74 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~-----~g~~Vtlv~~~~ 74 (358)
-+|+|||||++|+-+|..|++ .|.+|+|+|+.+
T Consensus 9 ~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~ 46 (665)
T 1pn0_A 9 CDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRS 46 (665)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCC
Confidence 369999999999999999999 999999999854
No 262
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=97.52 E-value=0.00056 Score=70.09 Aligned_cols=33 Identities=21% Similarity=0.379 Sum_probs=30.7
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
-.|+|||||.+|+-+|..|++.|.+|+|+++.+
T Consensus 6 ~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~ 38 (660)
T 2bs2_A 6 CDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIP 38 (660)
T ss_dssp CSEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred ccEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 379999999999999999999999999999864
No 263
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.47 E-value=0.00025 Score=72.21 Aligned_cols=52 Identities=13% Similarity=0.264 Sum_probs=40.9
Q ss_pred CCEEEcCCeeeEEEEcCC-CcEEEEEcC---CCc--EEecCeEEEeeCCCCChhhhhc
Q 018320 97 GVKFVKGTVLSSFDVDSN-GKVVAVNLR---DGN--RLPTDMVVVGIGIRPNTSLFEG 148 (358)
Q Consensus 97 gV~v~~~~~v~~i~~~~~-g~v~~v~~~---~g~--~i~~D~vi~a~G~~p~~~l~~~ 148 (358)
||++++++.|++|..+++ +++..|++. +|+ ++.+|.||+|+|..|++.++..
T Consensus 274 nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~~ 331 (623)
T 3pl8_A 274 RFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVN 331 (623)
T ss_dssp EEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHHT
T ss_pred CEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHHh
Confidence 789999999999987433 366666664 354 6889999999999999987653
No 264
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=97.34 E-value=0.001 Score=68.03 Aligned_cols=33 Identities=30% Similarity=0.484 Sum_probs=30.2
Q ss_pred CcEEEEcCcHHHHHHHHHHH---h-CCCcEEEEeeCC
Q 018320 42 GNAVVIGGGYIGMECAASLV---I-NKINVTMVFPEA 74 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~---~-~g~~Vtlv~~~~ 74 (358)
-.|+|||||.+|+-+|..|+ + .|.+|+|+++.+
T Consensus 23 ~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~ 59 (643)
T 1jnr_A 23 TDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAA 59 (643)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcC
Confidence 47999999999999999999 6 899999999865
No 265
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.26 E-value=0.0012 Score=66.11 Aligned_cols=31 Identities=32% Similarity=0.318 Sum_probs=29.4
Q ss_pred cEEEEcCcHHHHHHHHHHHhCCCcEEEEeeC
Q 018320 43 NAVVIGGGYIGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 43 ~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
.++|||+|+.|+.+|..++++|.+|.|||+.
T Consensus 44 DviVIG~GpaG~~aA~~aa~~G~kValIE~~ 74 (542)
T 4b1b_A 44 DYVVIGGGPGGMASAKEAAAHGARVLLFDYV 74 (542)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCCEEEECCC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEecc
Confidence 5999999999999999999999999999964
No 266
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.16 E-value=0.0018 Score=64.12 Aligned_cols=102 Identities=13% Similarity=0.096 Sum_probs=69.4
Q ss_pred cEEEEcCcHHHHHHHHHHHhCC--------------CcEEEEeeCCcc-------cCc----------------------
Q 018320 43 NAVVIGGGYIGMECAASLVINK--------------INVTMVFPEAHC-------MAR---------------------- 79 (358)
Q Consensus 43 ~vvVIGgG~~gle~A~~L~~~g--------------~~Vtlv~~~~~~-------l~~---------------------- 79 (358)
.|+|||+|+.|+.+|..|.+.| ..+..+++.+.+ ++.
T Consensus 41 Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~s~~s 120 (501)
T 4b63_A 41 DLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPRSSFT 120 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTTCTTS
T ss_pred cEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCCCccc
Confidence 5999999999999999998642 356777776532 110
Q ss_pred -------------------c--CCHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCC------cEEEEEcCCC-----cE
Q 018320 80 -------------------L--FTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNG------KVVAVNLRDG-----NR 127 (358)
Q Consensus 80 -------------------~--~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g------~v~~v~~~~g-----~~ 127 (358)
. .-.++.++++...++.+..+.++++|++++.++++ ....|+..++ ++
T Consensus 121 f~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~ 200 (501)
T 4b63_A 121 FLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISA 200 (501)
T ss_dssp HHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEE
T ss_pred hHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEE
Confidence 0 01245566666666667789999999999764332 1234554432 35
Q ss_pred EecCeEEEeeCCCCChh
Q 018320 128 LPTDMVVVGIGIRPNTS 144 (358)
Q Consensus 128 i~~D~vi~a~G~~p~~~ 144 (358)
+.++.||+|+|..|+..
T Consensus 201 ~~ar~vVlatG~~P~iP 217 (501)
T 4b63_A 201 RRTRKVVIAIGGTAKMP 217 (501)
T ss_dssp EEEEEEEECCCCEECCC
T ss_pred EEeCEEEECcCCCCCCC
Confidence 88999999999887754
No 267
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.07 E-value=0.00054 Score=67.36 Aligned_cols=74 Identities=18% Similarity=0.274 Sum_probs=52.4
Q ss_pred HHHHHHHHHh-----cCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCC---------HH--------H
Q 018320 28 DANRLVNVMK-----SCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFT---------PK--------I 85 (358)
Q Consensus 28 da~~i~~~l~-----~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~---------~~--------~ 85 (358)
|+.++.+.+. ....++|+|||||.+|+.+|..|++.|.+|+|+|+.+++..+... .+ .
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~ 94 (498)
T 2iid_A 15 DYEEFLEIARNGLKATSNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEK 94 (498)
T ss_dssp THHHHHHHHHHCSCCCSSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETTTTEEEESSCCCEETT
T ss_pred hHHHHHHHhccCCCCCCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccCCCCchhhcCcccccch
Confidence 4455555442 123678999999999999999999999999999998776543100 01 1
Q ss_pred HHHHHHHHHhCCCEEE
Q 018320 86 ASYYEEYYKSKGVKFV 101 (358)
Q Consensus 86 ~~~~~~~l~~~gV~v~ 101 (358)
...+.+.+++.|+++.
T Consensus 95 ~~~~~~~~~~~g~~~~ 110 (498)
T 2iid_A 95 HRIVREYIRKFDLRLN 110 (498)
T ss_dssp CHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHhCCCce
Confidence 3456677788888754
No 268
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=96.99 E-value=0.0016 Score=66.63 Aligned_cols=32 Identities=19% Similarity=0.201 Sum_probs=29.8
Q ss_pred CcEEEEcCcHHHHHHHHHHHhC------CCcEEEEeeC
Q 018320 42 GNAVVIGGGYIGMECAASLVIN------KINVTMVFPE 73 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~------g~~Vtlv~~~ 73 (358)
-.|+|||+|..|+-+|..|++. |.+|+|+++.
T Consensus 23 ~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~ 60 (662)
T 3gyx_A 23 VDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKA 60 (662)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSS
T ss_pred cCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEec
Confidence 3799999999999999999997 9999999985
No 269
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.86 E-value=0.0044 Score=54.58 Aligned_cols=109 Identities=15% Similarity=0.247 Sum_probs=69.4
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEE
Q 018320 39 CSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVV 118 (358)
Q Consensus 39 ~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~ 118 (358)
..+++++|||||.+|...+..|.+.|.+|+++.+. +.+++ .+...+.+++++... +
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~-------~~~~l----~~l~~~~~i~~i~~~----~--------- 84 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT-------VSAEI----NEWEAKGQLRVKRKK----V--------- 84 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS-------CCHHH----HHHHHTTSCEEECSC----C---------
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC-------CCHHH----HHHHHcCCcEEEECC----C---------
Confidence 36899999999999999999999999999999753 34543 333344567665321 1
Q ss_pred EEEcCCCcEEecCeEEEeeCCCCChhhhhcccccccCcEEEec-----cccCCCCcEEEEccccc
Q 018320 119 AVNLRDGNRLPTDMVVVGIGIRPNTSLFEGQLTLEKGGIKVTG-----RLQSSNSSVYAVGDVAA 178 (358)
Q Consensus 119 ~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~~~~~~g~i~vd~-----~~~t~~~~VyAiGD~~~ 178 (358)
.....-.+|+||.|||.......+.... . .+|.||- ...-..|.++--||..-
T Consensus 85 ----~~~dL~~adLVIaAT~d~~~N~~I~~~a--k-~gi~VNvvD~p~~~~f~~Paiv~rg~l~i 142 (223)
T 3dfz_A 85 ----GEEDLLNVFFIVVATNDQAVNKFVKQHI--K-NDQLVNMASSFSDGNIQIPAQFSRGRLSL 142 (223)
T ss_dssp ----CGGGSSSCSEEEECCCCTHHHHHHHHHS--C-TTCEEEC-----CCSEECCEEEEETTEEE
T ss_pred ----CHhHhCCCCEEEECCCCHHHHHHHHHHH--h-CCCEEEEeCCcccCeEEEeeEEEeCCEEE
Confidence 1111124899999998654443332211 2 4566652 12225677877777643
No 270
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.85 E-value=0.0014 Score=63.94 Aligned_cols=83 Identities=20% Similarity=0.165 Sum_probs=61.2
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEE
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVA 119 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~ 119 (358)
+++++.|||.|.+|+.+|..|.++|++|++.+..+.- .++ ..+.|++.||+++.+.....+
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~----~~~-----~~~~L~~~gi~~~~g~~~~~~---------- 68 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFD----ENP-----TAQSLLEEGIKVVCGSHPLEL---------- 68 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGG----GCH-----HHHHHHHTTCEEEESCCCGGG----------
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCccc----CCh-----HHHHHHhCCCEEEECCChHHh----------
Confidence 5799999999999999999999999999999886531 112 234677889998876431100
Q ss_pred EEcCCCcEEecCeEEEeeCCCCChhhhh
Q 018320 120 VNLRDGNRLPTDMVVVGIGIRPNTSLFE 147 (358)
Q Consensus 120 v~~~~g~~i~~D~vi~a~G~~p~~~l~~ 147 (358)
+ ++ .+|.||+++|..|+.+.+.
T Consensus 69 --~-~~---~~d~vv~spgi~~~~p~~~ 90 (451)
T 3lk7_A 69 --L-DE---DFCYMIKNPGIPYNNPMVK 90 (451)
T ss_dssp --G-GS---CEEEEEECTTSCTTSHHHH
T ss_pred --h-cC---CCCEEEECCcCCCCChhHH
Confidence 0 10 1799999999988876543
No 271
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=96.75 E-value=0.0025 Score=59.45 Aligned_cols=81 Identities=19% Similarity=0.175 Sum_probs=60.0
Q ss_pred CCCcEEEEcCcHHHHH-HHHHHHhCCCcEEEEeeCCcccCccCCHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEE
Q 018320 40 SGGNAVVIGGGYIGME-CAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVV 118 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle-~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~ 118 (358)
..+++.|||.|-+|+. +|..|.++|++|++.++.+. + + ..+.|++.||+++.+.....
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~--~----~-----~~~~L~~~gi~v~~g~~~~~---------- 61 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY--P----P-----MSTQLEALGIDVYEGFDAAQ---------- 61 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC--T----T-----HHHHHHHTTCEEEESCCGGG----------
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC--c----H-----HHHHHHhCCCEEECCCCHHH----------
Confidence 4689999999999997 89999999999999987653 1 1 23457788999886532110
Q ss_pred EEEcCCCcEEecCeEEEeeCCCCChhhhh
Q 018320 119 AVNLRDGNRLPTDMVVVGIGIRPNTSLFE 147 (358)
Q Consensus 119 ~v~~~~g~~i~~D~vi~a~G~~p~~~l~~ 147 (358)
+.. ..+|.||+++|..|+.+.+.
T Consensus 62 ---l~~---~~~d~vV~Spgi~~~~p~~~ 84 (326)
T 3eag_A 62 ---LDE---FKADVYVIGNVAKRGMDVVE 84 (326)
T ss_dssp ---GGS---CCCSEEEECTTCCTTCHHHH
T ss_pred ---cCC---CCCCEEEECCCcCCCCHHHH
Confidence 100 14899999999998877654
No 272
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=96.64 E-value=0.0014 Score=63.33 Aligned_cols=33 Identities=18% Similarity=0.281 Sum_probs=31.5
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
++|+|||||++|+.+|..|++.|.+|+|+|+.+
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 689999999999999999999999999999876
No 273
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=96.58 E-value=0.0022 Score=61.48 Aligned_cols=37 Identities=19% Similarity=0.274 Sum_probs=34.0
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCC-CcEEEEeeCCcc
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINK-INVTMVFPEAHC 76 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g-~~Vtlv~~~~~~ 76 (358)
+..+|+|||||..|+.+|..|++.| .+|+|+|+.+++
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~ 42 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHV 42 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCC
Confidence 4578999999999999999999999 899999998765
No 274
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=96.48 E-value=0.0021 Score=62.61 Aligned_cols=35 Identities=26% Similarity=0.381 Sum_probs=32.6
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCC--cEEEEeeCCcc
Q 018320 42 GNAVVIGGGYIGMECAASLVINKI--NVTMVFPEAHC 76 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~--~Vtlv~~~~~~ 76 (358)
++|+|||||.+|+-+|..|++.|. +|+|+|+.+++
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~ 39 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERL 39 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 589999999999999999999999 99999997655
No 275
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=96.46 E-value=0.0019 Score=63.37 Aligned_cols=36 Identities=22% Similarity=0.196 Sum_probs=32.3
Q ss_pred CcEEEEcCcHHHHHHHHHHHh-CCCcEEEEeeCCccc
Q 018320 42 GNAVVIGGGYIGMECAASLVI-NKINVTMVFPEAHCM 77 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~-~g~~Vtlv~~~~~~l 77 (358)
-.|+|||||+.|+-+|..|++ .|.+|+|+|+.+++.
T Consensus 11 ~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~G 47 (513)
T 4gde_A 11 VDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPG 47 (513)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCC
T ss_pred CCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCc
Confidence 369999999999999999987 599999999987764
No 276
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=96.42 E-value=0.0032 Score=59.95 Aligned_cols=37 Identities=16% Similarity=0.285 Sum_probs=33.7
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeC-Ccc
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPE-AHC 76 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~-~~~ 76 (358)
++.+|+|||+|+.|+-+|..|.+.|.+|+|+|+. +++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~v 80 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRV 80 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEecccccc
Confidence 4679999999999999999999999999999998 554
No 277
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=96.39 E-value=0.0032 Score=61.62 Aligned_cols=39 Identities=26% Similarity=0.284 Sum_probs=34.7
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccC
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMA 78 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~ 78 (358)
+..+|+|||||..|+-+|..|++.|.+|+|+|+.+++..
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG 48 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGG 48 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCC
Confidence 357899999999999999999999999999999876533
No 278
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=96.38 E-value=0.0031 Score=62.39 Aligned_cols=36 Identities=31% Similarity=0.429 Sum_probs=33.4
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcc
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHC 76 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~ 76 (358)
..+|+|||||..|+.+|..|++.|.+|+|+|+.+++
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~ 39 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRV 39 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 468999999999999999999999999999998766
No 279
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=96.37 E-value=0.0035 Score=59.95 Aligned_cols=33 Identities=24% Similarity=0.288 Sum_probs=31.1
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
++|+|||||..|+++|..|++.|.+|+|+++.+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 479999999999999999999999999999865
No 280
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=96.33 E-value=0.0031 Score=59.09 Aligned_cols=34 Identities=26% Similarity=0.401 Sum_probs=31.3
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
..+|+|||||.+|+-+|..|+++|.+|+|+++..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 4589999999999999999999999999999853
No 281
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=96.33 E-value=0.0032 Score=62.28 Aligned_cols=37 Identities=19% Similarity=0.326 Sum_probs=33.6
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCC-CcEEEEeeCCccc
Q 018320 41 GGNAVVIGGGYIGMECAASLVINK-INVTMVFPEAHCM 77 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g-~~Vtlv~~~~~~l 77 (358)
..+|+|||||..|+-+|..|++.| .+|+|+|+.+++.
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riG 45 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVG 45 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSB
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCC
Confidence 368999999999999999999999 9999999987653
No 282
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=96.29 E-value=0.0036 Score=60.96 Aligned_cols=38 Identities=26% Similarity=0.384 Sum_probs=33.7
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCccc
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM 77 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l 77 (358)
...+|+|||||..|+-+|..|++.|.+|+|+|+.+++.
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~G 52 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLG 52 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSB
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCC
Confidence 35789999999999999999999999999999987664
No 283
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=96.26 E-value=0.0036 Score=60.98 Aligned_cols=39 Identities=15% Similarity=0.182 Sum_probs=35.2
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCc
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMAR 79 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~ 79 (358)
..+|+|||+|..|+-+|..|++.|.+|+++|+.+++..+
T Consensus 11 ~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~ 49 (453)
T 2bcg_G 11 DYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGE 49 (453)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCcc
Confidence 358999999999999999999999999999999877543
No 284
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=96.15 E-value=0.0047 Score=60.59 Aligned_cols=37 Identities=32% Similarity=0.425 Sum_probs=34.2
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCccc
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM 77 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l 77 (358)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+++.
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~G 49 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAG 49 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCC
Confidence 5789999999999999999999999999999987763
No 285
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=96.13 E-value=0.0048 Score=60.48 Aligned_cols=37 Identities=22% Similarity=0.427 Sum_probs=34.0
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCccc
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM 77 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l 77 (358)
..+|+|||+|..|+-+|..|++.|.+|+|+|+.+++.
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~G 75 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIG 75 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSB
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 3689999999999999999999999999999987664
No 286
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=96.13 E-value=0.0049 Score=59.58 Aligned_cols=60 Identities=17% Similarity=0.304 Sum_probs=45.2
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCcc----------------CCHHHHHHHHHHHHhCCCEEEc
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARL----------------FTPKIASYYEEYYKSKGVKFVK 102 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~----------------~~~~~~~~~~~~l~~~gV~v~~ 102 (358)
.+|+|||||..|+.+|..|++.|.+|+|+|+.+++..+. +.+. ...+.+.+++.|++...
T Consensus 6 ~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~-~~~~~~~~~~~g~~~~~ 81 (453)
T 2yg5_A 6 RDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTIDGAVLEIGGQWVSPD-QTALISLLDELGLKTFE 81 (453)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEETTEEEECSCCCBCTT-CHHHHHHHHHTTCCEEE
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceeccccCCceeccCCeEecCc-cHHHHHHHHHcCCcccc
Confidence 589999999999999999999999999999987653221 1111 23455667888887653
No 287
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=96.02 E-value=0.0037 Score=58.28 Aligned_cols=32 Identities=25% Similarity=0.400 Sum_probs=30.1
Q ss_pred cEEEEcCcHHHHHHHHHHHhCC------CcEEEEeeCC
Q 018320 43 NAVVIGGGYIGMECAASLVINK------INVTMVFPEA 74 (358)
Q Consensus 43 ~vvVIGgG~~gle~A~~L~~~g------~~Vtlv~~~~ 74 (358)
+|+|||||.+|+.+|..|++.| .+|+|+|+.+
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 6999999999999999999998 8999999874
No 288
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=95.98 E-value=0.0059 Score=58.19 Aligned_cols=36 Identities=17% Similarity=0.298 Sum_probs=33.2
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCccc
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM 77 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l 77 (358)
.+++|||+|.+|+.+|..|++.|.+|+++|+.+++.
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~G 39 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIG 39 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcC
Confidence 589999999999999999999999999999987654
No 289
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.88 E-value=0.0099 Score=48.78 Aligned_cols=36 Identities=19% Similarity=0.138 Sum_probs=33.1
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCc
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 75 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~ 75 (358)
.+++++|+|+|.+|..+|..|.+.|.+|+++++.+.
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 578999999999999999999999999999988654
No 290
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=95.87 E-value=0.0067 Score=58.03 Aligned_cols=37 Identities=19% Similarity=0.317 Sum_probs=33.5
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhC-CCcEEEEeeCCccc
Q 018320 41 GGNAVVIGGGYIGMECAASLVIN-KINVTMVFPEAHCM 77 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~-g~~Vtlv~~~~~~l 77 (358)
..+++|||||..|+-+|..|++. |.+|+|+|+.+++.
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~G 44 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIG 44 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 46899999999999999999998 99999999987653
No 291
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=95.85 E-value=0.0073 Score=57.90 Aligned_cols=37 Identities=24% Similarity=0.331 Sum_probs=33.5
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCccc
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM 77 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l 77 (358)
..+++|||||+.|+-+|..|++.|.+|+|+|+.+++.
T Consensus 29 ~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~G 65 (397)
T 3hdq_A 29 GFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIG 65 (397)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSS
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCC
Confidence 4589999999999999999999999999999987653
No 292
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=95.78 E-value=0.0065 Score=59.11 Aligned_cols=35 Identities=23% Similarity=0.351 Sum_probs=32.5
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCC--CcEEEEeeCCcc
Q 018320 42 GNAVVIGGGYIGMECAASLVINK--INVTMVFPEAHC 76 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g--~~Vtlv~~~~~~ 76 (358)
.+|+|||||.+|+-+|..|++.| .+|+|+|+.+++
T Consensus 5 ~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~ 41 (475)
T 3lov_A 5 KRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERL 41 (475)
T ss_dssp CEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSS
T ss_pred ccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCC
Confidence 58999999999999999999999 999999997654
No 293
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=95.76 E-value=0.0094 Score=60.98 Aligned_cols=39 Identities=23% Similarity=0.387 Sum_probs=35.1
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccC
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMA 78 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~ 78 (358)
.+++|+|||+|+.|+.+|..|.+.|.+|+++|+.+++..
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg 144 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 144 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBT
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 357999999999999999999999999999999877644
No 294
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=95.76 E-value=0.0077 Score=56.95 Aligned_cols=35 Identities=23% Similarity=0.403 Sum_probs=32.1
Q ss_pred cEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCccc
Q 018320 43 NAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM 77 (358)
Q Consensus 43 ~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l 77 (358)
+++|||||..|+-+|..|++.|.+|+++|+.+++.
T Consensus 3 ~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~G 37 (367)
T 1i8t_A 3 DYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIG 37 (367)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCC
Confidence 68999999999999999999999999999987553
No 295
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=95.65 E-value=0.011 Score=62.27 Aligned_cols=39 Identities=23% Similarity=0.387 Sum_probs=35.2
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccC
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMA 78 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~ 78 (358)
..++|+|||+|+.|+.+|..|.+.|.+|+|+|+.+++..
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG 315 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 315 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCC
Confidence 357999999999999999999999999999999877644
No 296
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=95.61 E-value=0.024 Score=55.64 Aligned_cols=58 Identities=19% Similarity=0.241 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCC
Q 018320 83 PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIR 140 (358)
Q Consensus 83 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~ 140 (358)
.++.+.+.+.+++.|+++++++.|++|..++++++..|++.+|+++.||.||++.+..
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 4678888889999999999999999998756778888999999999999999999987
No 297
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=95.54 E-value=0.034 Score=51.43 Aligned_cols=84 Identities=25% Similarity=0.216 Sum_probs=53.6
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHHHHHHHHHHHhCCCEEEc-CCeeeEEEEcCCCcEEEE
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVK-GTVLSSFDVDSNGKVVAV 120 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~-~~~v~~i~~~~~g~v~~v 120 (358)
.++.|||+|.+|.-+|..|++.|.+|+++.|.+. +.+++.|+.+.. ...-..+. .- .+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~~---------------~~i~~~Gl~~~~~~~g~~~~~---~~---~~ 61 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSDY---------------ETVKAKGIRIRSATLGDYTFR---PA---AV 61 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTTH---------------HHHHHHCEEEEETTTCCEEEC---CS---CE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCChH---------------HHHHhCCcEEeecCCCcEEEe---ee---ee
Confidence 4899999999999999999999999999987530 234556766543 10000110 00 01
Q ss_pred EcCCCcE-E-ecCeEEEeeCCCCChhhhh
Q 018320 121 NLRDGNR-L-PTDMVVVGIGIRPNTSLFE 147 (358)
Q Consensus 121 ~~~~g~~-i-~~D~vi~a~G~~p~~~l~~ 147 (358)
. .+-.. . ++|.||+|+-.....+.++
T Consensus 62 ~-~~~~~~~~~~DlVilavK~~~~~~~l~ 89 (320)
T 3i83_A 62 V-RSAAELETKPDCTLLCIKVVEGADRVG 89 (320)
T ss_dssp E-SCGGGCSSCCSEEEECCCCCTTCCHHH
T ss_pred E-CCHHHcCCCCCEEEEecCCCChHHHHH
Confidence 1 22222 2 6899999998766555444
No 298
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.51 E-value=0.0065 Score=59.00 Aligned_cols=78 Identities=19% Similarity=0.300 Sum_probs=56.1
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEE
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVA 119 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~ 119 (358)
++++++|||.|.+|+.+|..|.++|.+|+..+..+.... . ..|+ .|+++..+....+ .
T Consensus 4 ~~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~---~--------~~l~-~G~~~~~g~~~~~----------~ 61 (439)
T 2x5o_A 4 QGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPG---L--------DKLP-EAVERHTGSLNDE----------W 61 (439)
T ss_dssp TTCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTT---G--------GGSC-TTSCEEESSCCHH----------H
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcch---h--------HHhh-CCCEEEECCCcHH----------H
Confidence 578999999999999999999999999999987654211 1 3345 6888876542100 0
Q ss_pred EEcCCCcEEecCeEEEeeCCCCChhhh
Q 018320 120 VNLRDGNRLPTDMVVVGIGIRPNTSLF 146 (358)
Q Consensus 120 v~~~~g~~i~~D~vi~a~G~~p~~~l~ 146 (358)
+ . .+|.||+++|..|+...+
T Consensus 62 --~----~-~~d~vV~s~gi~~~~p~~ 81 (439)
T 2x5o_A 62 --L----M-AADLIVASPGIALAHPSL 81 (439)
T ss_dssp --H----H-TCSEEEECTTSCTTCHHH
T ss_pred --h----c-cCCEEEeCCCCCCCCHHH
Confidence 1 1 378999999988765543
No 299
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=95.51 E-value=0.014 Score=57.43 Aligned_cols=37 Identities=22% Similarity=0.137 Sum_probs=33.5
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCC-CcEEEEeeCCcc
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINK-INVTMVFPEAHC 76 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g-~~Vtlv~~~~~~ 76 (358)
...+++|||||+.|+-+|..|++.| .+|+|+|+.+++
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~ 45 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTP 45 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSS
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 3568999999999999999999998 799999998765
No 300
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.48 E-value=0.018 Score=46.95 Aligned_cols=33 Identities=18% Similarity=0.181 Sum_probs=30.9
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeC
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
.++++|+|+|.+|..++..|.+.|.+|+++++.
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 578999999999999999999999999999875
No 301
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=95.35 E-value=0.015 Score=57.34 Aligned_cols=77 Identities=16% Similarity=0.126 Sum_probs=57.2
Q ss_pred CCCcEEEEcCcHHHHH-HHHHHHhCCCcEEEEeeCCcccCccCCHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEE
Q 018320 40 SGGNAVVIGGGYIGME-CAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVV 118 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle-~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~ 118 (358)
+.+++.|||-|-+|+. +|..|.++|++|+..+..+. + ..+.|++.||+++.+.....
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~-------~-----~~~~l~~~gi~~~~g~~~~~---------- 78 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPN-------S-----VTQHLTALGAQIYFHHRPEN---------- 78 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCC-------H-----HHHHHHHTTCEEESSCCGGG----------
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCC-------H-----HHHHHHHCCCEEECCCCHHH----------
Confidence 4689999999999997 89999999999999876432 2 13457888999987632110
Q ss_pred EEEcCCCcEEecCeEEEeeCCCCChhhh
Q 018320 119 AVNLRDGNRLPTDMVVVGIGIRPNTSLF 146 (358)
Q Consensus 119 ~v~~~~g~~i~~D~vi~a~G~~p~~~l~ 146 (358)
+ ..+|.||+++|..|+.+.+
T Consensus 79 ---~-----~~~d~vV~Spgi~~~~p~~ 98 (494)
T 4hv4_A 79 ---V-----LDASVVVVSTAISADNPEI 98 (494)
T ss_dssp ---G-----TTCSEEEECTTSCTTCHHH
T ss_pred ---c-----CCCCEEEECCCCCCCCHHH
Confidence 1 1379999999998876543
No 302
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.26 E-value=0.017 Score=46.36 Aligned_cols=33 Identities=21% Similarity=0.137 Sum_probs=30.7
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeC
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
.++++|+|+|.+|..+|..|.+.|.+|+++++.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 478999999999999999999999999999874
No 303
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.16 E-value=0.019 Score=45.58 Aligned_cols=33 Identities=21% Similarity=0.304 Sum_probs=29.8
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeC
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
..+++|+|+|.+|..+|..|.+.|.+|+++++.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 468999999999999999999999999999864
No 304
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.13 E-value=0.019 Score=46.21 Aligned_cols=77 Identities=16% Similarity=0.244 Sum_probs=51.0
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEE
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAV 120 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v 120 (358)
.++++|+|.|.+|..+|..|.+.|.+|+++++.+ +.. +.+++.|+.++.+..- +.. +
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~---------~~~----~~~~~~g~~~i~gd~~-------~~~---~ 63 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR---------TRV----DELRERGVRAVLGNAA-------NEE---I 63 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH---------HHH----HHHHHTTCEEEESCTT-------SHH---H
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH---------HHH----HHHHHcCCCEEECCCC-------CHH---H
Confidence 4689999999999999999999999999998743 222 2344567776543110 000 0
Q ss_pred EcCCCcEEecCeEEEeeCCCC
Q 018320 121 NLRDGNRLPTDMVVVGIGIRP 141 (358)
Q Consensus 121 ~~~~g~~i~~D~vi~a~G~~p 141 (358)
+..-..-.+|.+|++++...
T Consensus 64 -l~~a~i~~ad~vi~~~~~~~ 83 (140)
T 3fwz_A 64 -MQLAHLECAKWLILTIPNGY 83 (140)
T ss_dssp -HHHTTGGGCSEEEECCSCHH
T ss_pred -HHhcCcccCCEEEEECCChH
Confidence 00001235899999998643
No 305
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=95.01 E-value=0.024 Score=54.80 Aligned_cols=37 Identities=14% Similarity=0.097 Sum_probs=33.6
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCccc
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCM 77 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l 77 (358)
..+++|||+|..|+-+|..|++.|.+|+++|+.+.+.
T Consensus 6 ~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~g 42 (433)
T 1d5t_A 6 EYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYG 42 (433)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCcc
Confidence 4589999999999999999999999999999987654
No 306
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.98 E-value=0.024 Score=45.08 Aligned_cols=34 Identities=24% Similarity=0.091 Sum_probs=30.6
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeC
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
+.++++|+|+|.+|..+|..|.+.|.+|+++++.
T Consensus 5 ~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 5 KNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred cCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3578999999999999999999999999999864
No 307
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.95 E-value=0.018 Score=44.17 Aligned_cols=33 Identities=33% Similarity=0.334 Sum_probs=30.2
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCC-CcEEEEeeC
Q 018320 41 GGNAVVIGGGYIGMECAASLVINK-INVTMVFPE 73 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g-~~Vtlv~~~ 73 (358)
.++++|+|+|.+|..++..|.+.| .+|+++.|.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 578999999999999999999999 899998874
No 308
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=94.94 E-value=0.025 Score=55.03 Aligned_cols=38 Identities=24% Similarity=0.406 Sum_probs=33.4
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCC-cEEEEeeCCcccC
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKI-NVTMVFPEAHCMA 78 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~-~Vtlv~~~~~~l~ 78 (358)
..+|+|||+|..|+-+|..|.+.|. +|+++|+.+++..
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg 42 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGG 42 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBT
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCC
Confidence 4689999999999999999999998 8999999876543
No 309
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=94.75 E-value=0.026 Score=55.31 Aligned_cols=37 Identities=8% Similarity=0.031 Sum_probs=33.9
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccC
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMA 78 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~ 78 (358)
-+|+|||+|..|+-+|..|++.|.+|+++|+.+.+..
T Consensus 21 ~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg 57 (475)
T 3p1w_A 21 YDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGG 57 (475)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCC
Confidence 4799999999999999999999999999999877644
No 310
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.73 E-value=0.025 Score=51.24 Aligned_cols=34 Identities=26% Similarity=0.494 Sum_probs=32.1
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeC
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
++++|+|||||.+|...+..|.+.|++||++.+.
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 6899999999999999999999999999999864
No 311
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=94.69 E-value=0.043 Score=50.53 Aligned_cols=84 Identities=21% Similarity=0.243 Sum_probs=52.5
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEE
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVN 121 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~ 121 (358)
.++.|||+|.+|.-+|..|++.|.+|+++.|.+ . +.+++.|+.+.....-..+. . ..+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~-------------~~i~~~g~~~~~~~g~~~~~---~---~~~~ 61 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD--Y-------------EAIAGNGLKVFSINGDFTLP---H---VKGY 61 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT--H-------------HHHHHTCEEEEETTCCEEES---C---CCEE
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc--H-------------HHHHhCCCEEEcCCCeEEEe---e---ceee
Confidence 479999999999999999999999999998742 0 23456787665311100110 0 0011
Q ss_pred cCCCc-EEecCeEEEeeCCCCChhhhh
Q 018320 122 LRDGN-RLPTDMVVVGIGIRPNTSLFE 147 (358)
Q Consensus 122 ~~~g~-~i~~D~vi~a~G~~p~~~l~~ 147 (358)
.+-. .-++|.||+++-.....+.++
T Consensus 62 -~~~~~~~~~D~vilavk~~~~~~~l~ 87 (312)
T 3hn2_A 62 -RAPEEIGPMDLVLVGLKTFANSRYEE 87 (312)
T ss_dssp -SCHHHHCCCSEEEECCCGGGGGGHHH
T ss_pred -cCHHHcCCCCEEEEecCCCCcHHHHH
Confidence 1111 125899999987665444443
No 312
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=94.42 E-value=0.05 Score=50.61 Aligned_cols=76 Identities=16% Similarity=0.278 Sum_probs=49.5
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEE
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVN 121 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~ 121 (358)
.++.|||+|.+|.-+|..|++.|.+|+++.|.++ .+.+++.|+.+..... .... . + ...
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~~~--------------~~~~~~~g~~~~~~~~--~~~~--~--~-~~~ 62 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARGAT--------------LQALQTAGLRLTEDGA--THTL--P--V-RAT 62 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCHHH--------------HHHHHHTCEEEEETTE--EEEE--C--C-EEE
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEEChHH--------------HHHHHHCCCEEecCCC--eEEE--e--e-eEE
Confidence 5899999999999999999999999999976311 1345667877653211 1110 0 0 111
Q ss_pred cCCCc-EEecCeEEEeeCC
Q 018320 122 LRDGN-RLPTDMVVVGIGI 139 (358)
Q Consensus 122 ~~~g~-~i~~D~vi~a~G~ 139 (358)
.+-. .-.+|.||+++..
T Consensus 63 -~~~~~~~~~D~Vilavk~ 80 (335)
T 3ghy_A 63 -HDAAALGEQDVVIVAVKA 80 (335)
T ss_dssp -SCHHHHCCCSEEEECCCH
T ss_pred -CCHHHcCCCCEEEEeCCc
Confidence 1211 1358999999865
No 313
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=94.18 E-value=0.035 Score=51.45 Aligned_cols=37 Identities=19% Similarity=0.362 Sum_probs=32.2
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcc
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHC 76 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~ 76 (358)
..++|.|||+|.+|..+|..++..|.+|++++..+..
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~ 41 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQ 41 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence 3578999999999999999999999999999876543
No 314
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.18 E-value=0.036 Score=46.57 Aligned_cols=33 Identities=15% Similarity=0.099 Sum_probs=30.6
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhC-CCcEEEEeeC
Q 018320 41 GGNAVVIGGGYIGMECAASLVIN-KINVTMVFPE 73 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~-g~~Vtlv~~~ 73 (358)
+++++|+|.|.+|..+|..|.+. |.+|+++++.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~ 72 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIR 72 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECC
Confidence 56899999999999999999999 9999999864
No 315
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=94.16 E-value=0.08 Score=52.52 Aligned_cols=80 Identities=21% Similarity=0.204 Sum_probs=58.4
Q ss_pred CCCcEEEEcCcHHHHH-HHHHHHhCCCcEEEEeeCCcccCccCCHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEE
Q 018320 40 SGGNAVVIGGGYIGME-CAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVV 118 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle-~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~ 118 (358)
+.+++.+||-|-+|+. +|..|.++|.+|+..+..+. + + ..+.|++.||+++.+.....
T Consensus 18 ~~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~--~----~-----~~~~L~~~gi~~~~G~~~~~---------- 76 (524)
T 3hn7_A 18 QGMHIHILGICGTFMGSLALLARALGHTVTGSDANIY--P----P-----MSTQLEQAGVTIEEGYLIAH---------- 76 (524)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--T----T-----HHHHHHHTTCEEEESCCGGG----------
T ss_pred cCCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCC--c----H-----HHHHHHHCCCEEECCCCHHH----------
Confidence 5789999999999997 68889999999999987542 1 1 23567788999886632110
Q ss_pred EEEcCCCcEEecCeEEEeeCCCCChhhhh
Q 018320 119 AVNLRDGNRLPTDMVVVGIGIRPNTSLFE 147 (358)
Q Consensus 119 ~v~~~~g~~i~~D~vi~a~G~~p~~~l~~ 147 (358)
+ .-.+|.||++.|..|..+.+.
T Consensus 77 ---~----~~~~d~vV~Spgi~~~~p~l~ 98 (524)
T 3hn7_A 77 ---L----QPAPDLVVVGNAMKRGMDVIE 98 (524)
T ss_dssp ---G----CSCCSEEEECTTCCTTSHHHH
T ss_pred ---c----CCCCCEEEECCCcCCCCHHHH
Confidence 0 014799999999988776543
No 316
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=94.13 E-value=0.053 Score=50.07 Aligned_cols=33 Identities=18% Similarity=0.355 Sum_probs=29.1
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeC
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
...++.|||+|.+|.-+|..|++.|.+|+++ +.
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 3579999999999999999999999999998 53
No 317
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=93.97 E-value=0.021 Score=58.75 Aligned_cols=35 Identities=20% Similarity=0.245 Sum_probs=32.9
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCC--------CcEEEEeeCC-cc
Q 018320 42 GNAVVIGGGYIGMECAASLVINK--------INVTMVFPEA-HC 76 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g--------~~Vtlv~~~~-~~ 76 (358)
++|+|||+|..|+.+|..|.+.| .+|+|+|+.+ ++
T Consensus 57 ~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 57 YRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 68999999999999999999998 8999999988 76
No 318
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=93.83 E-value=0.12 Score=50.35 Aligned_cols=55 Identities=24% Similarity=0.312 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHhCC-CEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCC
Q 018320 83 PKIASYYEEYYKSKG-VKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGI 139 (358)
Q Consensus 83 ~~~~~~~~~~l~~~g-V~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~ 139 (358)
..+.+.+.+.+.+.| +++++++.|++|+.++++ ..|++.+|+++.+|.||+|+|.
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~--v~v~~~~g~~~~ad~vI~a~~~ 310 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDA--ARVTARDGREFVAKRVVCTIPL 310 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEECSSS--EEEEETTCCEEEEEEEEECCCG
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCE--EEEEECCCCEEEcCEEEECCCH
Confidence 356677778888888 999999999999874443 3577788888999999999984
No 319
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=93.54 E-value=0.3 Score=47.11 Aligned_cols=35 Identities=26% Similarity=0.399 Sum_probs=31.1
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
.+.+..|||.|+.|+-+|..|++.|.+|+.+++.+
T Consensus 10 ~~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~ 44 (431)
T 3ojo_A 10 HGSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQ 44 (431)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 47899999999999999999999999999998754
No 320
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=93.38 E-value=0.057 Score=48.97 Aligned_cols=35 Identities=23% Similarity=0.229 Sum_probs=31.8
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCc
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 75 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~ 75 (358)
-++|.|||+|.+|..+|..|++.|.+|+++++.+.
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~ 38 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTD 38 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 36899999999999999999999999999987654
No 321
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=93.28 E-value=0.23 Score=45.80 Aligned_cols=35 Identities=14% Similarity=-0.039 Sum_probs=31.7
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCC-CcEEEEeeCCc
Q 018320 41 GGNAVVIGGGYIGMECAASLVINK-INVTMVFPEAH 75 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g-~~Vtlv~~~~~ 75 (358)
..+|.|||.|.+|..+|..|.+.| .+|+++.+.+.
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~ 59 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFN 59 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 368999999999999999999999 99999988653
No 322
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=93.17 E-value=0.075 Score=52.83 Aligned_cols=33 Identities=18% Similarity=0.198 Sum_probs=30.9
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
-.++|||+|..|+-+|..|++.|.+|.++|+++
T Consensus 8 ~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~ 40 (546)
T 1kdg_A 8 YDYIIVGAGPGGIIAADRLSEAGKKVLLLERGG 40 (546)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred eeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 479999999999999999999999999999874
No 323
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=93.03 E-value=0.076 Score=53.63 Aligned_cols=54 Identities=22% Similarity=0.319 Sum_probs=38.4
Q ss_pred ccCcEEEeccccCCCCcEEEEcccccccccccCcccccc--cHHHHHHHHHHHHHHHcC
Q 018320 153 EKGGIKVTGRLQSSNSSVYAVGDVAAFPLKLLGETRRLE--HVDSARKSAKHAVAAIME 209 (358)
Q Consensus 153 ~~g~i~vd~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~--~~~~A~~~g~~aa~~i~g 209 (358)
.-|+|.||.++||++|++||+|+|+... ++|..+ +. ....+.-.|++|+.+++.
T Consensus 358 t~GGi~vd~~~~~~IpGLyAaGe~a~~g--~hGanr-l~gnsl~~~~vfGr~Ag~~aa~ 413 (602)
T 1kf6_A 358 TMGGIETDQNCETRIKGLFAVGECSSVG--LHGANR-LGSNSLAELVVFGRLAGEQATE 413 (602)
T ss_dssp ECCEEECCTTSBCSSBTEEECGGGEECS--SSTTSC-CTTHHHHHHHHHHHHHHHHHHH
T ss_pred eCCeEEECCCCccccCCEEEcccccccc--ccCCCC-CccHHHHHHHHHHHHHHHHHHH
Confidence 4589999999999999999999997421 122221 22 244667778888887754
No 324
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=92.93 E-value=0.11 Score=45.25 Aligned_cols=36 Identities=14% Similarity=0.177 Sum_probs=32.2
Q ss_pred CCCcEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeCCc
Q 018320 40 SGGNAVVIGG-GYIGMECAASLVINKINVTMVFPEAH 75 (358)
Q Consensus 40 ~~~~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~~~ 75 (358)
.+++++|.|+ |.+|..++..|.+.|.+|+++.|.+.
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~ 56 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEE 56 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChH
Confidence 5789999997 99999999999999999999988643
No 325
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=92.90 E-value=0.049 Score=43.89 Aligned_cols=34 Identities=21% Similarity=0.355 Sum_probs=30.8
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeC
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
.+++++|||+|.+|..++..|.+.|.+|+++.|.
T Consensus 20 ~~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~ 53 (144)
T 3oj0_A 20 GGNKILLVGNGMLASEIAPYFSYPQYKVTVAGRN 53 (144)
T ss_dssp CCCEEEEECCSHHHHHHGGGCCTTTCEEEEEESC
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCC
Confidence 4789999999999999999999999998888764
No 326
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=92.81 E-value=0.16 Score=46.73 Aligned_cols=34 Identities=15% Similarity=0.014 Sum_probs=30.3
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCC-cEEEEeeCC
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKI-NVTMVFPEA 74 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~-~Vtlv~~~~ 74 (358)
..+|.|||.|.+|.-+|..|.+.|. +|+++.+.+
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~ 58 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAAS 58 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSC
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCC
Confidence 3689999999999999999999999 999988753
No 327
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=92.77 E-value=0.08 Score=45.82 Aligned_cols=31 Identities=23% Similarity=0.379 Sum_probs=29.2
Q ss_pred cEEEEcCcHHHHHHHHHHHhCCCcEEEEeeC
Q 018320 43 NAVVIGGGYIGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 43 ~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
+++|+|+|.+|..+|..|.+.|.+|+++++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 6999999999999999999999999999864
No 328
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=92.76 E-value=0.17 Score=45.57 Aligned_cols=47 Identities=21% Similarity=0.220 Sum_probs=38.3
Q ss_pred HHHHHHHHHhcCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 28 DANRLVNVMKSCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 28 da~~i~~~l~~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
|..-+...++...+++++|+|+|-+|--++..|.+.|.+|+++.|.+
T Consensus 105 D~~Gf~~~L~~~~~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 105 DALGFYLSLKQKNYQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp HHHHHHHHCC---CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred hHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 66666666654347899999999999999999999999999998864
No 329
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=92.54 E-value=0.15 Score=45.67 Aligned_cols=35 Identities=26% Similarity=0.285 Sum_probs=32.1
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCc
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 75 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~ 75 (358)
.++|+|.|+|++|..++..|.+.|.+|+.+.|.+.
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 47899999999999999999999999999988754
No 330
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=92.09 E-value=0.16 Score=48.59 Aligned_cols=35 Identities=17% Similarity=0.190 Sum_probs=32.2
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
++.+|+|+|+|.+|+.+|..+...|.+|+++++.+
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 57899999999999999999999999999988764
No 331
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=92.07 E-value=0.12 Score=49.04 Aligned_cols=35 Identities=20% Similarity=0.150 Sum_probs=32.4
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
++++|+|+|+|.+|..+|..+...|.+|+++++.+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 57899999999999999999999999999998764
No 332
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=92.00 E-value=0.11 Score=51.12 Aligned_cols=34 Identities=26% Similarity=0.335 Sum_probs=30.6
Q ss_pred CcEEEEcCcHHHHHHHHHHHh-CCCcEEEEeeCCc
Q 018320 42 GNAVVIGGGYIGMECAASLVI-NKINVTMVFPEAH 75 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~-~g~~Vtlv~~~~~ 75 (358)
-.++|||||..|+-+|..|++ .+.+|.|+|+++.
T Consensus 18 yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 18 CDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred eeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 479999999999999999998 5789999998853
No 333
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=91.90 E-value=0.13 Score=49.42 Aligned_cols=58 Identities=16% Similarity=0.269 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCCCC
Q 018320 83 PKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIRPN 142 (358)
Q Consensus 83 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~p~ 142 (358)
..+.+.+.+.+++.|+++++++.|++|.. +++++..+. .+|+++.+|.||+++|..+.
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~-~~~~v~~v~-~~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIM-ENGKVVGVK-SEGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEE-ETTEEEEEE-ETTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEE-eCCEEEEEE-ECCeEEECCEEEECCCCCcc
Confidence 46777888888889999999999999986 455555555 47889999999999997763
No 334
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=91.80 E-value=0.24 Score=47.85 Aligned_cols=59 Identities=12% Similarity=0.149 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHhCCCEEEcCCeeeEEEEcC-CCcEEEEEcCCCcEEecCeEEEeeCCCCC
Q 018320 83 PKIASYYEEYYKSKGVKFVKGTVLSSFDVDS-NGKVVAVNLRDGNRLPTDMVVVGIGIRPN 142 (358)
Q Consensus 83 ~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~-~g~v~~v~~~~g~~i~~D~vi~a~G~~p~ 142 (358)
..+.+.+.+.+++.|+++++++.|++|..+. ++++..|.+ +|+++.+|.||+++|..|.
T Consensus 242 ~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 242 GELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccch
Confidence 4677888888999999999999999998742 566666665 5888999999999997643
No 335
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=91.76 E-value=0.15 Score=49.54 Aligned_cols=34 Identities=18% Similarity=0.254 Sum_probs=31.8
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeC
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
++++++|||+|.+|...+..|.+.|.+|+++.+.
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 5799999999999999999999999999999863
No 336
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=91.68 E-value=0.18 Score=45.54 Aligned_cols=33 Identities=30% Similarity=0.407 Sum_probs=30.3
Q ss_pred cEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeCCc
Q 018320 43 NAVVIGG-GYIGMECAASLVINKINVTMVFPEAH 75 (358)
Q Consensus 43 ~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~~~ 75 (358)
||+|.|| |++|-.++..|.+.|.+|+.+.|.+.
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG 35 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 6899997 99999999999999999999998754
No 337
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=91.59 E-value=0.17 Score=49.69 Aligned_cols=34 Identities=29% Similarity=0.192 Sum_probs=31.4
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCc
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 75 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~ 75 (358)
-.++|||+|..|+-+|..|++.|.+|.++|+++.
T Consensus 6 ~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 39 (504)
T 1n4w_A 6 VPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQL 39 (504)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 4799999999999999999999999999998764
No 338
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=91.56 E-value=0.18 Score=48.28 Aligned_cols=35 Identities=17% Similarity=0.171 Sum_probs=32.0
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
++++|+|+|+|.+|+.++..+...|.+|+++++.+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 47899999999999999999999999999988754
No 339
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=91.55 E-value=0.16 Score=45.43 Aligned_cols=33 Identities=15% Similarity=0.202 Sum_probs=30.9
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
++|+|.|+|++|..++..|.+.|.+|+.+.|.+
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 689999999999999999999999999998864
No 340
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=91.54 E-value=0.19 Score=46.98 Aligned_cols=33 Identities=21% Similarity=0.262 Sum_probs=30.7
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
|+|+|+|||..|.+++..+++.|++|.+++..+
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~ 34 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNP 34 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 689999999999999999999999999998754
No 341
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=91.46 E-value=0.21 Score=43.07 Aligned_cols=36 Identities=19% Similarity=0.271 Sum_probs=31.4
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCc
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 75 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~ 75 (358)
...++.|||.|.+|..+|..|.+.|.+|+++.|.+.
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 457899999999999999999999999999987653
No 342
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=91.41 E-value=0.31 Score=43.95 Aligned_cols=48 Identities=6% Similarity=0.136 Sum_probs=38.2
Q ss_pred CHHHHHHHHHHHhcCCCCcEEEEcCc-HHHHHHHHHHHhCCCcEEEEeeC
Q 018320 25 DLADANRLVNVMKSCSGGNAVVIGGG-YIGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 25 ~~~da~~i~~~l~~~~~~~vvVIGgG-~~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
|.....++.+... ..+++++|||.| ..|.-+|..|.+.|+.||++++.
T Consensus 135 Tp~gv~~lL~~~~-l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~ 183 (276)
T 3ngx_A 135 TPRAVIDIMDYYG-YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK 183 (276)
T ss_dssp HHHHHHHHHHHHT-CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred cHHHHHHHHHHhC-cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4445555555554 689999999976 58999999999999999999753
No 343
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=91.39 E-value=0.11 Score=51.75 Aligned_cols=33 Identities=30% Similarity=0.349 Sum_probs=30.3
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCc
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 75 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~ 75 (358)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 27 yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~ 59 (536)
T 1ju2_A 27 YDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSL 59 (536)
T ss_dssp EEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBC
T ss_pred ccEEEECccHHHHHHHHHHhc-CCcEEEEecCCC
Confidence 369999999999999999999 999999999853
No 344
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=91.39 E-value=0.21 Score=41.94 Aligned_cols=34 Identities=21% Similarity=0.353 Sum_probs=31.3
Q ss_pred CcEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeCCc
Q 018320 42 GNAVVIGG-GYIGMECAASLVINKINVTMVFPEAH 75 (358)
Q Consensus 42 ~~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~~~ 75 (358)
++++|.|+ |.+|..++..|.+.|.+|+++.|.+.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~ 38 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSS 38 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChh
Confidence 68999997 99999999999999999999998754
No 345
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=91.37 E-value=0.21 Score=47.42 Aligned_cols=35 Identities=20% Similarity=0.143 Sum_probs=32.1
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
++++|+|+|+|.+|+.++..+...|.+|+++++.+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 58899999999999999999999999999988754
No 346
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=91.34 E-value=0.53 Score=41.62 Aligned_cols=55 Identities=27% Similarity=0.187 Sum_probs=38.9
Q ss_pred HhcCCCCcEEEEc-CcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHHHHHHHHHHHhCCCE
Q 018320 36 MKSCSGGNAVVIG-GGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVK 99 (358)
Q Consensus 36 l~~~~~~~vvVIG-gG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~ 99 (358)
+...++|.++|.| +|.+|.++|..|++.|.+|.++.|.. +-.+.+.+.+.+.+.+
T Consensus 24 m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~---------~~~~~~~~~~~~~~~~ 79 (262)
T 3rkr_A 24 MSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDV---------EKLRAVEREIVAAGGE 79 (262)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH---------HHHHHHHHHHHHTTCE
T ss_pred hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCH---------HHHHHHHHHHHHhCCc
Confidence 3334678888888 48899999999999999999987642 2234445555555543
No 347
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=91.31 E-value=0.19 Score=45.78 Aligned_cols=35 Identities=26% Similarity=0.314 Sum_probs=31.6
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCc
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 75 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~ 75 (358)
-++|.|||+|..|..+|..|++.|.+|+++++.+.
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~ 49 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTED 49 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 36899999999999999999999999999987643
No 348
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=91.30 E-value=0.18 Score=47.60 Aligned_cols=34 Identities=24% Similarity=0.358 Sum_probs=31.5
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeC
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
++++++|+|+|.+|..+|..+...|.+|+++.+.
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~ 198 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVN 198 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 5789999999999999999999999999998764
No 349
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=91.16 E-value=0.17 Score=45.03 Aligned_cols=34 Identities=18% Similarity=0.329 Sum_probs=31.2
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCC-cEEEEeeCC
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKI-NVTMVFPEA 74 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~-~Vtlv~~~~ 74 (358)
.++|+|||+|-+|.++|..|++.|. +++++++..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 5799999999999999999999997 899998764
No 350
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=91.10 E-value=0.17 Score=46.81 Aligned_cols=35 Identities=20% Similarity=0.395 Sum_probs=31.5
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCc
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 75 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~ 75 (358)
-++|.|||+|.+|.-+|..|++.|.+|+++++.+.
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 47899999999999999999999999999987654
No 351
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=91.09 E-value=0.35 Score=43.38 Aligned_cols=46 Identities=20% Similarity=0.181 Sum_probs=36.8
Q ss_pred HHHHHHHHHh----cCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeC
Q 018320 28 DANRLVNVMK----SCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 28 da~~i~~~l~----~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
|...+...++ ..++++++|+|+|-+|..+|..|.+.|.+|+++.|.
T Consensus 102 D~~G~~~~L~~~~~~l~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 102 DGVGLLSDLERLSFIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp HHHHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CHHHHHHHHHhcCcCcCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 4555555443 235789999999999999999999999999998764
No 352
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=91.07 E-value=0.22 Score=45.78 Aligned_cols=35 Identities=20% Similarity=0.166 Sum_probs=30.1
Q ss_pred CCCcEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 40 SGGNAVVIGG-GYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 40 ~~~~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
++++|+|.|| |++|..++..|.+.|.+|+++.|.+
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~ 53 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRP 53 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCC
Confidence 5789999997 9999999999999999999998865
No 353
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=90.96 E-value=0.18 Score=51.43 Aligned_cols=55 Identities=11% Similarity=0.067 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEc---CCCc--EEecCeEEEeeCC
Q 018320 84 KIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNL---RDGN--RLPTDMVVVGIGI 139 (358)
Q Consensus 84 ~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~---~~g~--~i~~D~vi~a~G~ 139 (358)
.+...+.+.+.+.||+++.++.++++.. +++++..+.. .+|+ .+.++.||+|+|.
T Consensus 159 ~l~~~L~~~a~~~gv~i~~~~~v~~L~~-~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG 218 (660)
T 2bs2_A 159 TMLFAVANECLKLGVSIQDRKEAIALIH-QDGKCYGAVVRDLVTGDIIAYVAKGTLIATGG 218 (660)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEE-ETTEEEEEEEEETTTCCEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHhCCCEEEECcEEEEEEe-cCCEEEEEEEEECCCCcEEEEEcCEEEEccCc
Confidence 5666677777788999999999999976 4566555543 4665 4889999999884
No 354
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=90.93 E-value=0.35 Score=46.60 Aligned_cols=54 Identities=22% Similarity=0.404 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCC
Q 018320 84 KIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGI 139 (358)
Q Consensus 84 ~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~ 139 (358)
.+.+.+.+.+++.|+++++++.|++|+.++++. ..|.+ ++.++.+|.||++++.
T Consensus 235 ~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~-~~v~~-~~~~~~ad~vv~a~p~ 288 (477)
T 3nks_A 235 MLPQALETHLTSRGVSVLRGQPVCGLSLQAEGR-WKVSL-RDSSLEADHVISAIPA 288 (477)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEECGGGC-EEEEC-SSCEEEESEEEECSCH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCce-EEEEE-CCeEEEcCEEEECCCH
Confidence 567788888999999999999999998744332 34555 5568999999999874
No 355
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=90.87 E-value=0.18 Score=50.09 Aligned_cols=56 Identities=13% Similarity=0.103 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHh-CCCEEEcCCeeeEEEEcCCC------cEEEEEcC---CCc--EEecCeEEEeeCC
Q 018320 84 KIASYYEEYYKS-KGVKFVKGTVLSSFDVDSNG------KVVAVNLR---DGN--RLPTDMVVVGIGI 139 (358)
Q Consensus 84 ~~~~~~~~~l~~-~gV~v~~~~~v~~i~~~~~g------~v~~v~~~---~g~--~i~~D~vi~a~G~ 139 (358)
.+...+.+.+++ .||+++.++.++++..++++ ++..+... +|+ ++.++.||+|+|.
T Consensus 139 ~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg 206 (540)
T 1chu_A 139 EVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGG 206 (540)
T ss_dssp ---CCCHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCC
Confidence 344445566777 79999999999999863334 66555543 564 6899999999984
No 356
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=90.87 E-value=0.23 Score=44.45 Aligned_cols=33 Identities=18% Similarity=0.189 Sum_probs=30.5
Q ss_pred cEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCc
Q 018320 43 NAVVIGGGYIGMECAASLVINKINVTMVFPEAH 75 (358)
Q Consensus 43 ~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~ 75 (358)
++.|||+|.+|.-+|..|.+.|.+|+++.|.+.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 689999999999999999999999999988754
No 357
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=90.81 E-value=0.22 Score=49.01 Aligned_cols=34 Identities=32% Similarity=0.311 Sum_probs=31.5
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCc
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 75 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~ 75 (358)
-.++|||+|..|+-+|..|++.|.+|.++|+++.
T Consensus 12 ~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 12 VPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 4799999999999999999999999999998864
No 358
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=90.78 E-value=0.47 Score=43.62 Aligned_cols=36 Identities=19% Similarity=0.124 Sum_probs=32.5
Q ss_pred CCCcEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeCCc
Q 018320 40 SGGNAVVIGG-GYIGMECAASLVINKINVTMVFPEAH 75 (358)
Q Consensus 40 ~~~~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~~~ 75 (358)
.+++|+|.|| |++|..++..|.+.|.+|+.+.|.+.
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 60 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFST 60 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 4789999995 99999999999999999999988653
No 359
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=90.75 E-value=0.71 Score=46.84 Aligned_cols=61 Identities=13% Similarity=0.120 Sum_probs=50.8
Q ss_pred CHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCC-CcEEEEEcCCCcEEecCeEEEeeCCCCC
Q 018320 82 TPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSN-GKVVAVNLRDGNRLPTDMVVVGIGIRPN 142 (358)
Q Consensus 82 ~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~-g~v~~v~~~~g~~i~~D~vi~a~G~~p~ 142 (358)
...+.+.+.+.++..|.++++++.|.+|..+++ |++..+.+.+|+++.+|.||......|.
T Consensus 377 ~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~~lp~ 438 (650)
T 1vg0_A 377 QGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYLSE 438 (650)
T ss_dssp TTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGGGBCT
T ss_pred hhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChhhcCH
Confidence 356788888899999999999999999976443 7787888788999999999997776554
No 360
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=90.73 E-value=0.84 Score=41.98 Aligned_cols=56 Identities=20% Similarity=0.259 Sum_probs=41.2
Q ss_pred CCcEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHHHHHHHHHHHhCCCEEEc
Q 018320 41 GGNAVVIGG-GYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVK 102 (358)
Q Consensus 41 ~~~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~ 102 (358)
.++|+|.|+ |++|..++..|.+.|.+|+++.|.+.. +++-... .+.+...+++++.
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~-----~~~~~~~-~~~l~~~~v~~~~ 66 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPR-----SPSKAKI-FKALEDKGAIIVY 66 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCC-----CHHHHHH-HHHHHHTTCEEEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCC-----ChhHHHH-HHHHHhCCcEEEE
Confidence 468999998 999999999999999999999987531 2332232 2345567777764
No 361
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=90.64 E-value=0.19 Score=43.14 Aligned_cols=40 Identities=25% Similarity=0.357 Sum_probs=31.0
Q ss_pred ccccCCCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcCCC
Q 018320 161 GRLQSSNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIMEPD 211 (358)
Q Consensus 161 ~~~~t~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~ 211 (358)
..++++.++||++||++... .+..|+..|+.||+.|+...
T Consensus 288 ~~~~~~~~~v~l~GDa~~g~-----------gv~~A~~sG~~aA~~I~~~L 327 (336)
T 3kkj_A 288 GALSDADLGIYVCGDWCLSG-----------RVEGAWLSGQEAARRLLEHL 327 (336)
T ss_dssp SSEEETTTTEEECCGGGTTS-----------SHHHHHHHHHHHHHHHHHHT
T ss_pred cceeeCCCCEEEEecccCCc-----------CHHHHHHHHHHHHHHHHHHh
Confidence 34556789999999987542 36789999999999987543
No 362
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=90.46 E-value=0.55 Score=42.37 Aligned_cols=34 Identities=32% Similarity=0.387 Sum_probs=31.3
Q ss_pred CCCcEEEEc-CcHHHHHHHHHHHhCCCcEEEEeeC
Q 018320 40 SGGNAVVIG-GGYIGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 40 ~~~~vvVIG-gG~~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
++++++|+| +|.+|..+|..|.+.|.+|+++.|.
T Consensus 118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~ 152 (287)
T 1lu9_A 118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK 152 (287)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence 578999999 8999999999999999999998775
No 363
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=90.44 E-value=0.29 Score=46.33 Aligned_cols=34 Identities=26% Similarity=0.223 Sum_probs=31.5
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeC
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
.+++|+|+|+|.+|..+|..+...|.+|+++.+.
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~ 200 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDIN 200 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 5789999999999999999999999999988764
No 364
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=90.41 E-value=0.29 Score=41.60 Aligned_cols=32 Identities=22% Similarity=0.225 Sum_probs=29.3
Q ss_pred cEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 43 NAVVIGG-GYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 43 ~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
+|+|.|+ |++|..++..|.+.|.+|+++.|.+
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 6899995 9999999999999999999998864
No 365
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=90.39 E-value=0.31 Score=44.40 Aligned_cols=35 Identities=26% Similarity=0.299 Sum_probs=32.2
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeC
Q 018320 39 CSGGNAVVIGGGYIGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 39 ~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
..++++.|||.|.+|..+|..|...|.+|+++.|.
T Consensus 155 l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~ 189 (300)
T 2rir_A 155 IHGSQVAVLGLGRTGMTIARTFAALGANVKVGARS 189 (300)
T ss_dssp STTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECC
Confidence 36899999999999999999999999999998874
No 366
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=90.38 E-value=0.22 Score=48.65 Aligned_cols=35 Identities=34% Similarity=0.402 Sum_probs=31.8
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeC
Q 018320 39 CSGGNAVVIGGGYIGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 39 ~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
..+|+++|+|+|.+|..+|..|+..|.+|+++++.
T Consensus 263 L~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~ 297 (488)
T 3ond_A 263 IAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEID 297 (488)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 36899999999999999999999999999988653
No 367
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=90.37 E-value=0.38 Score=43.23 Aligned_cols=46 Identities=15% Similarity=0.216 Sum_probs=37.4
Q ss_pred HHHHHHHHHhc----CCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeC
Q 018320 28 DANRLVNVMKS----CSGGNAVVIGGGYIGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 28 da~~i~~~l~~----~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
|...+...++. .++++++|+|+|-+|..+|..|.+.|.+|+++.|.
T Consensus 102 D~~G~~~~L~~~~~~~~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~ 151 (272)
T 1p77_A 102 DGIGLVTDLQRLNWLRPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRT 151 (272)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESS
T ss_pred CHHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 45555555542 25789999999999999999999999999999875
No 368
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=90.37 E-value=0.32 Score=44.17 Aligned_cols=35 Identities=29% Similarity=0.368 Sum_probs=32.2
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeC
Q 018320 39 CSGGNAVVIGGGYIGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 39 ~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
..++++.|||.|.+|..+|..|...|.+|+++.+.
T Consensus 153 l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~ 187 (293)
T 3d4o_A 153 IHGANVAVLGLGRVGMSVARKFAALGAKVKVGARE 187 (293)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECC
Confidence 36899999999999999999999999999998775
No 369
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=90.35 E-value=1.2 Score=39.75 Aligned_cols=61 Identities=18% Similarity=0.104 Sum_probs=42.6
Q ss_pred CCCCcEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeCCcccCc----cCCHHHHHHHHHHHHhCCCE
Q 018320 39 CSGGNAVVIGG-GYIGMECAASLVINKINVTMVFPEAHCMAR----LFTPKIASYYEEYYKSKGVK 99 (358)
Q Consensus 39 ~~~~~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~~~~l~~----~~~~~~~~~~~~~l~~~gV~ 99 (358)
.++|.++|.|+ |.+|.++|..|++.|.+|.++.+....... .-+++-.+.+.+.+++.|.+
T Consensus 13 l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (280)
T 3pgx_A 13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRK 78 (280)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCC
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCe
Confidence 36788999984 789999999999999999999875322110 01455555566666665543
No 370
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=90.30 E-value=0.15 Score=52.15 Aligned_cols=55 Identities=15% Similarity=0.205 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHhC--CCEEEcCCeeeEEEEcCC--CcEEEEEc---CCCc--EEecCeEEEeeC
Q 018320 84 KIASYYEEYYKSK--GVKFVKGTVLSSFDVDSN--GKVVAVNL---RDGN--RLPTDMVVVGIG 138 (358)
Q Consensus 84 ~~~~~~~~~l~~~--gV~v~~~~~v~~i~~~~~--g~v~~v~~---~~g~--~i~~D~vi~a~G 138 (358)
.+...+.+.+++. ||+++.++.++++..+++ |++..+.. .+|+ .+.++.||+|||
T Consensus 167 ~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATG 230 (662)
T 3gyx_A 167 SYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACG 230 (662)
T ss_dssp SHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCC
T ss_pred HHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCC
Confidence 4555666677776 999999999988876443 36666543 3453 578999999998
No 371
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=90.28 E-value=0.31 Score=44.08 Aligned_cols=36 Identities=28% Similarity=0.337 Sum_probs=32.2
Q ss_pred CCCcEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeCCc
Q 018320 40 SGGNAVVIGG-GYIGMECAASLVINKINVTMVFPEAH 75 (358)
Q Consensus 40 ~~~~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~~~ 75 (358)
..++|+|.|| |++|..++..|.+.|.+|+++.|.+.
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 3689999998 99999999999999999999988754
No 372
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=90.26 E-value=0.36 Score=46.99 Aligned_cols=100 Identities=14% Similarity=0.172 Sum_probs=63.4
Q ss_pred CCeEEecCHHHHHHHHHHHhc--CCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHHHHHHHHHHHh
Q 018320 18 ENVCYLRDLADANRLVNVMKS--CSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKS 95 (358)
Q Consensus 18 ~~v~~l~~~~da~~i~~~l~~--~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~ 95 (358)
+.+|.+-+.++..++.+.+.. .+.++++|+|||.+|..+|..|.+ ..+|+++++. ++-.+.+.+.|.
T Consensus 210 D~v~~i~~~~~i~~~~~~~g~~~~~~~~v~I~GgG~ig~~lA~~L~~-~~~v~iIE~d---------~~r~~~la~~l~- 278 (461)
T 4g65_A 210 DEVFFVAASNHIRSVMSELQRLEKPYRRIMIVGGGNIGASLAKRLEQ-TYSVKLIERN---------LQRAEKLSEELE- 278 (461)
T ss_dssp CEEEEEEETTTHHHHHHHTTGGGSCCCEEEEECCSHHHHHHHHHHTT-TSEEEEEESC---------HHHHHHHHHHCT-
T ss_pred CEEEEEeccchHHHHHHhhccccccccEEEEEcchHHHHHHHHHhhh-cCceEEEecC---------HHHHHHHHHHCC-
Confidence 457777777777777766642 256899999999999999999965 5899999863 444455555442
Q ss_pred CCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCC
Q 018320 96 KGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIR 140 (358)
Q Consensus 96 ~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~ 140 (358)
+..++. +|+.-..+ +.+-..-++|.++.+|+..
T Consensus 279 -~~~Vi~----------GD~td~~~-L~ee~i~~~D~~ia~T~~D 311 (461)
T 4g65_A 279 -NTIVFC----------GDAADQEL-LTEENIDQVDVFIALTNED 311 (461)
T ss_dssp -TSEEEE----------SCTTCHHH-HHHTTGGGCSEEEECCSCH
T ss_pred -CceEEe----------ccccchhh-HhhcCchhhcEEEEcccCc
Confidence 233332 22210000 1111235689999999853
No 373
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=90.21 E-value=1.2 Score=39.74 Aligned_cols=59 Identities=20% Similarity=0.097 Sum_probs=41.2
Q ss_pred CCCcEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeCCcccCcc-------CCHHHHHHHHHHHHhCCC
Q 018320 40 SGGNAVVIGG-GYIGMECAASLVINKINVTMVFPEAHCMARL-------FTPKIASYYEEYYKSKGV 98 (358)
Q Consensus 40 ~~~~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~-------~~~~~~~~~~~~l~~~gV 98 (358)
.+|.++|.|+ +.+|.++|..|++.|.+|.++.+.+...... -+++-.+.+.+.++..+.
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNR 76 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCC
Confidence 5788999985 6899999999999999999998764321110 134444555556666543
No 374
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=90.20 E-value=0.62 Score=45.13 Aligned_cols=61 Identities=20% Similarity=0.321 Sum_probs=42.7
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccC-------ccCCHHHHHHHHHHHHhCCCEEE
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMA-------RLFTPKIASYYEEYYKSKGVKFV 101 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~-------~~~~~~~~~~~~~~l~~~gV~v~ 101 (358)
.-++.|||.|+.|+-+|..|++.|.+|+++.+.+.... ....+.+.+.+.+.+...++.+-
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~t 75 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFT 75 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEE
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEE
Confidence 45899999999999999999999999999998754311 11344454555444444445443
No 375
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=90.19 E-value=0.31 Score=47.15 Aligned_cols=59 Identities=17% Similarity=0.256 Sum_probs=42.7
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcc-------cCccCCHHHHHHHHHHHHhCCCEE
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHC-------MARLFTPKIASYYEEYYKSKGVKF 100 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~-------l~~~~~~~~~~~~~~~l~~~gV~v 100 (358)
.++.|||.|++|+-+|..|++.|.+|+-++..+.- -.+..+|.+.+.+.+.+.+..+.+
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~ 87 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSF 87 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeE
Confidence 58999999999999999999999999999765321 111245566666666665554443
No 376
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=90.15 E-value=0.47 Score=43.01 Aligned_cols=46 Identities=20% Similarity=0.276 Sum_probs=36.4
Q ss_pred HHHHHHHHHh----cCCCCcEEEEcCcHHHHHHHHHHHhCCC-cEEEEeeC
Q 018320 28 DANRLVNVMK----SCSGGNAVVIGGGYIGMECAASLVINKI-NVTMVFPE 73 (358)
Q Consensus 28 da~~i~~~l~----~~~~~~vvVIGgG~~gle~A~~L~~~g~-~Vtlv~~~ 73 (358)
|..-+...++ ..++++++|+|+|-+|..++..|.+.|. +|+++.|.
T Consensus 110 D~~G~~~~l~~~~~~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~ 160 (283)
T 3jyo_A 110 DVSGFGRGMEEGLPNAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD 160 (283)
T ss_dssp HHHHHHHHHHHHCTTCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CHHHHHHHHHHhCcCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC
Confidence 4545544443 3468899999999999999999999998 69998764
No 377
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=90.14 E-value=0.32 Score=45.98 Aligned_cols=35 Identities=23% Similarity=0.339 Sum_probs=32.3
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
++++++|+|+|.+|..++..+.++|.+|.++.+.+
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~ 47 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTK 47 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 57899999999999999999999999999998654
No 378
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=90.13 E-value=0.37 Score=44.04 Aligned_cols=48 Identities=23% Similarity=0.288 Sum_probs=36.1
Q ss_pred CHHHHHHHHHHHh-cCCCCcEEEEcCcH-HHHHHHHHHHhCCCcEEEEee
Q 018320 25 DLADANRLVNVMK-SCSGGNAVVIGGGY-IGMECAASLVINKINVTMVFP 72 (358)
Q Consensus 25 ~~~da~~i~~~l~-~~~~~~vvVIGgG~-~gle~A~~L~~~g~~Vtlv~~ 72 (358)
|.....++.+... ...+++++|||+|. +|.-+|..|.+.|+.||++++
T Consensus 148 Tp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs 197 (301)
T 1a4i_A 148 TPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHS 197 (301)
T ss_dssp HHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECT
T ss_pred hHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEEC
Confidence 3444444433322 34789999999995 799999999999999999974
No 379
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=90.12 E-value=0.31 Score=44.50 Aligned_cols=35 Identities=23% Similarity=0.127 Sum_probs=31.7
Q ss_pred CCcEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeCCc
Q 018320 41 GGNAVVIGG-GYIGMECAASLVINKINVTMVFPEAH 75 (358)
Q Consensus 41 ~~~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~~~ 75 (358)
+++++|.|| |++|..++..|.+.|.+|+++.|.+.
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 38 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSG 38 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCc
Confidence 578999997 99999999999999999999988654
No 380
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=90.11 E-value=0.84 Score=40.43 Aligned_cols=55 Identities=18% Similarity=0.375 Sum_probs=40.8
Q ss_pred CCCcEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHHHHHHHHHHHhCCCEE
Q 018320 40 SGGNAVVIGG-GYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKF 100 (358)
Q Consensus 40 ~~~~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v 100 (358)
.+|.++|.|| +.+|.++|..|++.|.+|.++.+..+ +.+-.+.+.+.+++.|.++
T Consensus 10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~ 65 (262)
T 3ksu_A 10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAK------DSDTANKLKDELEDQGAKV 65 (262)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGG------GHHHHHHHHHHHHTTTCEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCcc------CHHHHHHHHHHHHhcCCcE
Confidence 5788999985 78999999999999999999876432 3444455566666665443
No 381
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=90.10 E-value=0.27 Score=43.34 Aligned_cols=36 Identities=25% Similarity=0.291 Sum_probs=32.2
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCc
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 75 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~ 75 (358)
..+++.|||.|.+|..+|..|.+.|.+|++..|.+.
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 578999999999999999999999999999987643
No 382
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=90.07 E-value=0.45 Score=43.19 Aligned_cols=49 Identities=22% Similarity=0.238 Sum_probs=37.0
Q ss_pred CHHHHHHHHHHHh-cCCCCcEEEEcCcH-HHHHHHHHHHhCCCcEEEEeeC
Q 018320 25 DLADANRLVNVMK-SCSGGNAVVIGGGY-IGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 25 ~~~da~~i~~~l~-~~~~~~vvVIGgG~-~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
|.....++.+... ...+++++|||.|. +|.-+|..|.+.|+.||++++.
T Consensus 142 Tp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 192 (288)
T 1b0a_A 142 TPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRF 192 (288)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSS
T ss_pred cHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence 3444444443332 34789999999995 6999999999999999999754
No 383
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=89.99 E-value=0.59 Score=43.08 Aligned_cols=47 Identities=11% Similarity=0.258 Sum_probs=37.9
Q ss_pred HHHHHHHHHhc----CCCCcEEEEcCcHHHHHHHHHHHhCCC-cEEEEeeCC
Q 018320 28 DANRLVNVMKS----CSGGNAVVIGGGYIGMECAASLVINKI-NVTMVFPEA 74 (358)
Q Consensus 28 da~~i~~~l~~----~~~~~vvVIGgG~~gle~A~~L~~~g~-~Vtlv~~~~ 74 (358)
|..-+...++. ..+++++|+|+|-+|-.+|..|++.|. +|+++.|.+
T Consensus 137 D~~Gf~~~L~~~~~~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~ 188 (315)
T 3tnl_A 137 DGTGYMRALKEAGHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKD 188 (315)
T ss_dssp HHHHHHHHHHHTTCCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred CHHHHHHHHHHcCCCccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCC
Confidence 55555555542 357899999999999999999999998 899998863
No 384
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=89.96 E-value=0.77 Score=40.79 Aligned_cols=51 Identities=24% Similarity=0.360 Sum_probs=39.0
Q ss_pred CCCcEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHHHHHHHHHHHhCCC
Q 018320 40 SGGNAVVIGG-GYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGV 98 (358)
Q Consensus 40 ~~~~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gV 98 (358)
.+|+++|.|| |.+|.++|..|++.|.+|.++.|.+ ++..+.+.+.+++.+.
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~ 79 (271)
T 4iin_A 28 TGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSN--------AEVADALKNELEEKGY 79 (271)
T ss_dssp SCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC--------HHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCC--------HHHHHHHHHHHHhcCC
Confidence 5788888884 7899999999999999999988742 3444555666666554
No 385
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=89.96 E-value=0.33 Score=45.54 Aligned_cols=34 Identities=29% Similarity=0.404 Sum_probs=31.4
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeC
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
++++|+|+|+|.+|..++..+...|.+|+++.+.
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~ 199 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDIN 199 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 4689999999999999999999999999998875
No 386
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=89.96 E-value=0.23 Score=45.30 Aligned_cols=34 Identities=24% Similarity=0.291 Sum_probs=30.6
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
..|+|.|||.|..|..+|..|+ .|.+|+++++.+
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 4689999999999999999999 999999998754
No 387
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=89.66 E-value=1.2 Score=39.66 Aligned_cols=58 Identities=19% Similarity=0.150 Sum_probs=40.1
Q ss_pred CCCcEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeCCcccCc---cCCHHHHHHHHHHHHhCC
Q 018320 40 SGGNAVVIGG-GYIGMECAASLVINKINVTMVFPEAHCMAR---LFTPKIASYYEEYYKSKG 97 (358)
Q Consensus 40 ~~~~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~~~~l~~---~~~~~~~~~~~~~l~~~g 97 (358)
.+|.++|.|| |.+|.++|..|++.|.+|.++.+.+..... .-+++-.+...+.+...+
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG 73 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcC
Confidence 5788999985 789999999999999999999886443211 012444444445555544
No 388
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=89.64 E-value=1.3 Score=38.68 Aligned_cols=34 Identities=24% Similarity=0.249 Sum_probs=30.1
Q ss_pred CCCcEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeC
Q 018320 40 SGGNAVVIGG-GYIGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 40 ~~~~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
.+|.++|.|+ |.+|.++|..|++.|.+|.++.|.
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~ 42 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADIN 42 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCC
Confidence 5788999985 889999999999999999998764
No 389
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=89.59 E-value=0.3 Score=41.91 Aligned_cols=36 Identities=22% Similarity=0.371 Sum_probs=32.1
Q ss_pred CcEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeCCccc
Q 018320 42 GNAVVIGG-GYIGMECAASLVINKINVTMVFPEAHCM 77 (358)
Q Consensus 42 ~~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~~~~l 77 (358)
++++|.|| |++|..++..|.+.|.+|+++.|.+.-.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 41 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKI 41 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGC
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccc
Confidence 68999995 9999999999999999999999876543
No 390
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=89.54 E-value=0.35 Score=43.62 Aligned_cols=34 Identities=26% Similarity=0.222 Sum_probs=31.0
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCc
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 75 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~ 75 (358)
++|.|||.|.+|..+|..|.+.|.+|+++.|.+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 5799999999999999999999999999987653
No 391
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=89.51 E-value=0.29 Score=47.00 Aligned_cols=35 Identities=29% Similarity=0.336 Sum_probs=32.1
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
.+++++|+|.|.+|..+|..|...|.+|++.++.+
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 68999999999999999999999999999987643
No 392
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=89.49 E-value=0.34 Score=43.94 Aligned_cols=35 Identities=29% Similarity=0.372 Sum_probs=31.0
Q ss_pred CCCCcEEEEcCc-HHHHHHHHHHHhCCCcEEEEeeC
Q 018320 39 CSGGNAVVIGGG-YIGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 39 ~~~~~vvVIGgG-~~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
..+++++|||.| .+|.-+|..|.+.|+.||++++.
T Consensus 159 l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~ 194 (286)
T 4a5o_A 159 LYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRF 194 (286)
T ss_dssp CTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence 478999999954 58999999999999999999764
No 393
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=89.49 E-value=0.37 Score=46.24 Aligned_cols=35 Identities=20% Similarity=0.303 Sum_probs=32.0
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
++++|+|+|+|.+|.+++..+.++|.+|.++++.+
T Consensus 34 ~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~ 68 (419)
T 4e4t_A 34 PGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDP 68 (419)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 67899999999999999999999999999987643
No 394
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=89.42 E-value=0.52 Score=41.43 Aligned_cols=37 Identities=16% Similarity=0.254 Sum_probs=31.6
Q ss_pred CCCcEEEEcC-----------------cHHHHHHHHHHHhCCCcEEEEeeCCcc
Q 018320 40 SGGNAVVIGG-----------------GYIGMECAASLVINKINVTMVFPEAHC 76 (358)
Q Consensus 40 ~~~~vvVIGg-----------------G~~gle~A~~L~~~g~~Vtlv~~~~~~ 76 (358)
.+++|+|-|| |-+|..+|..|.++|++|+++.+....
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~ 55 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRAL 55 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSC
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 4788998887 489999999999999999999986543
No 395
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=89.41 E-value=0.41 Score=41.65 Aligned_cols=34 Identities=15% Similarity=0.033 Sum_probs=30.3
Q ss_pred CcEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeCCc
Q 018320 42 GNAVVIGG-GYIGMECAASLVINKINVTMVFPEAH 75 (358)
Q Consensus 42 ~~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~~~ 75 (358)
|+++|.|+ |.+|..++..|.+.|.+|+++.|.+.
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~ 36 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQA 36 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChh
Confidence 47899986 99999999999999999999988654
No 396
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=89.41 E-value=0.33 Score=48.75 Aligned_cols=35 Identities=29% Similarity=0.356 Sum_probs=31.7
Q ss_pred CcEEEEcCcHHHHHHHHHHHh-CCCcEEEEeeCCcc
Q 018320 42 GNAVVIGGGYIGMECAASLVI-NKINVTMVFPEAHC 76 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~-~g~~Vtlv~~~~~~ 76 (358)
-.++|||+|..|+-+|..|++ .|.+|.++|+++..
T Consensus 25 ~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 25 YDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 479999999999999999999 79999999988643
No 397
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=89.34 E-value=0.28 Score=48.72 Aligned_cols=34 Identities=29% Similarity=0.438 Sum_probs=31.1
Q ss_pred CcEEEEcCcHHHHHHHHHHHhC-CCcEEEEeeCCc
Q 018320 42 GNAVVIGGGYIGMECAASLVIN-KINVTMVFPEAH 75 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~-g~~Vtlv~~~~~ 75 (358)
-.++|||+|..|+-+|..|++. |.+|.++|+++.
T Consensus 14 ~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~ 48 (546)
T 2jbv_A 14 FDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPD 48 (546)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCc
Confidence 4799999999999999999998 899999998754
No 398
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=89.34 E-value=0.48 Score=43.76 Aligned_cols=49 Identities=18% Similarity=0.125 Sum_probs=38.5
Q ss_pred CHHHHHHHHHH---------Hh-cCCCCcEEEEcCcH-HHHHHHHHHHhCCCcEEEEeeC
Q 018320 25 DLADANRLVNV---------MK-SCSGGNAVVIGGGY-IGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 25 ~~~da~~i~~~---------l~-~~~~~~vvVIGgG~-~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
|..-+.++.+. .. ...+++++|||+|. +|.-+|..|...|..||++.|.
T Consensus 151 Tp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 151 TPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp HHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred cHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 44555565555 22 34789999999995 5999999999999999999765
No 399
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=89.32 E-value=0.28 Score=44.47 Aligned_cols=32 Identities=19% Similarity=0.178 Sum_probs=29.5
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeC
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
.++.|||+|.+|.-+|..|.+.|.+|+++.|.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 47999999999999999999999999999764
No 400
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=89.32 E-value=0.29 Score=49.12 Aligned_cols=33 Identities=30% Similarity=0.437 Sum_probs=30.7
Q ss_pred cEEEEcCcHHHHHHHHHHHhCC-CcEEEEeeCCc
Q 018320 43 NAVVIGGGYIGMECAASLVINK-INVTMVFPEAH 75 (358)
Q Consensus 43 ~vvVIGgG~~gle~A~~L~~~g-~~Vtlv~~~~~ 75 (358)
.+||||||..|+-+|..|++.+ .+|.|+|.++.
T Consensus 8 DyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 8 DFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp EEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred cEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 6899999999999999999998 69999999876
No 401
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=89.28 E-value=0.39 Score=41.00 Aligned_cols=32 Identities=22% Similarity=0.247 Sum_probs=29.2
Q ss_pred cEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 43 NAVVIGG-GYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 43 ~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
+++|.|+ |++|..++..|.+.|.+|+++.|.+
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 5899997 9999999999999999999998753
No 402
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=89.27 E-value=0.78 Score=42.20 Aligned_cols=47 Identities=19% Similarity=0.326 Sum_probs=37.9
Q ss_pred HHHHHHHHHhc----CCCCcEEEEcCcHHHHHHHHHHHhCCC-cEEEEeeCC
Q 018320 28 DANRLVNVMKS----CSGGNAVVIGGGYIGMECAASLVINKI-NVTMVFPEA 74 (358)
Q Consensus 28 da~~i~~~l~~----~~~~~vvVIGgG~~gle~A~~L~~~g~-~Vtlv~~~~ 74 (358)
|..-+...++. ..+++++|+|+|-+|-.++..|.+.|. +|+++.|.+
T Consensus 131 D~~Gf~~~L~~~~~~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~ 182 (312)
T 3t4e_A 131 DGTGHIRAIKESGFDMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKD 182 (312)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred cHHHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCC
Confidence 55555555543 257899999999999999999999998 799998863
No 403
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=89.26 E-value=0.47 Score=42.89 Aligned_cols=49 Identities=24% Similarity=0.309 Sum_probs=37.2
Q ss_pred CHHHHHHHHHHHh-cCCCCcEEEEcCcH-HHHHHHHHHHhC--CCcEEEEeeC
Q 018320 25 DLADANRLVNVMK-SCSGGNAVVIGGGY-IGMECAASLVIN--KINVTMVFPE 73 (358)
Q Consensus 25 ~~~da~~i~~~l~-~~~~~~vvVIGgG~-~gle~A~~L~~~--g~~Vtlv~~~ 73 (358)
|..-+.++.+... +..+++++|||.|. +|.-+|..|.+. |..||+.++.
T Consensus 141 Tp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~ 193 (281)
T 2c2x_A 141 TPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTG 193 (281)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTT
T ss_pred hHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECc
Confidence 3444445544443 45789999999996 599999999999 8999998654
No 404
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=89.18 E-value=0.44 Score=41.12 Aligned_cols=33 Identities=18% Similarity=0.183 Sum_probs=29.6
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeC
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
..++.|||+|.+|..+|..|.+.|.+|+++.|.
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 368999999999999999999999999998764
No 405
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=89.18 E-value=0.35 Score=43.79 Aligned_cols=36 Identities=14% Similarity=0.095 Sum_probs=32.6
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCC-cEEEEeeCCc
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKI-NVTMVFPEAH 75 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~-~Vtlv~~~~~ 75 (358)
.+++++|+|+|-+|-.++..|.+.|. +|+++.|.+.
T Consensus 116 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~ 152 (277)
T 3don_A 116 EDAYILILGAGGASKGIANELYKIVRPTLTVANRTMS 152 (277)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGG
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHH
Confidence 57899999999999999999999998 8999988754
No 406
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=89.15 E-value=0.43 Score=44.93 Aligned_cols=35 Identities=29% Similarity=0.358 Sum_probs=32.2
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
++++|.|+|+|..|..++..+.++|.+|.++.+.+
T Consensus 11 ~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~ 45 (377)
T 3orq_A 11 FGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSE 45 (377)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 57899999999999999999999999999998754
No 407
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=89.14 E-value=0.42 Score=43.54 Aligned_cols=34 Identities=18% Similarity=0.302 Sum_probs=31.0
Q ss_pred CCCcEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeC
Q 018320 40 SGGNAVVIGG-GYIGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 40 ~~~~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
++++++|.|| |++|..++..|.+.|.+|+++.|.
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4689999997 999999999999999999998875
No 408
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=89.12 E-value=0.48 Score=41.49 Aligned_cols=35 Identities=29% Similarity=0.330 Sum_probs=31.3
Q ss_pred CCCcEEEEcC-----------------cHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 40 SGGNAVVIGG-----------------GYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 40 ~~~~vvVIGg-----------------G~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
.+|+++|-|| |-+|..+|..|+++|++|+++.+..
T Consensus 7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~ 58 (226)
T 1u7z_A 7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPV 58 (226)
T ss_dssp TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSC
T ss_pred CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCc
Confidence 5789999998 7899999999999999999997644
No 409
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=89.12 E-value=0.42 Score=48.52 Aligned_cols=54 Identities=19% Similarity=0.023 Sum_probs=42.4
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHHHHHHHHHHHhC
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSK 96 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~ 96 (358)
-.++|+|+|..+.-+|..|++.|++|.++++.+++.....+..+ ..+.+++++.
T Consensus 9 ~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~~~~l-~~l~~w~~~~ 62 (650)
T 1vg0_A 9 FDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSF-SGLLSWLKEY 62 (650)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECH-HHHHHHHHHT
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCccccccH-HHHHHHHHHh
Confidence 37999999999999999999999999999999998765444333 3344544443
No 410
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=89.12 E-value=0.33 Score=46.88 Aligned_cols=36 Identities=31% Similarity=0.280 Sum_probs=32.5
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 39 CSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 39 ~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
..+|+++|+|.|.+|..+|..|...|.+|++.++.+
T Consensus 245 L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp 280 (464)
T 3n58_A 245 MAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDP 280 (464)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred ccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 368999999999999999999999999999987643
No 411
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=89.12 E-value=0.74 Score=41.66 Aligned_cols=46 Identities=20% Similarity=0.265 Sum_probs=36.2
Q ss_pred HHHHHHHHHhc----CCCCcEEEEcCcHHHHHHHHHHHhCCC-cEEEEeeC
Q 018320 28 DANRLVNVMKS----CSGGNAVVIGGGYIGMECAASLVINKI-NVTMVFPE 73 (358)
Q Consensus 28 da~~i~~~l~~----~~~~~vvVIGgG~~gle~A~~L~~~g~-~Vtlv~~~ 73 (358)
|..-+...++. ..+++++|+|+|-+|-.++..|.+.|. +|+++.|.
T Consensus 109 D~~G~~~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~ 159 (281)
T 3o8q_A 109 DGEGLVQDLLAQQVLLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRT 159 (281)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESS
T ss_pred HHHHHHHHHHHhCCCccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECC
Confidence 45444444432 257899999999999999999999996 89998774
No 412
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=89.10 E-value=0.54 Score=42.53 Aligned_cols=45 Identities=18% Similarity=0.192 Sum_probs=35.8
Q ss_pred HHHHHHHHHh----cCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeC
Q 018320 28 DANRLVNVMK----SCSGGNAVVIGGGYIGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 28 da~~i~~~l~----~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
|...+...++ ...+++++|+|+|-+|..+|..|.+.| +|+++.|.
T Consensus 111 d~~G~~~~L~~~~~~l~~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 111 DGIGARMALEEEIGRVKDKNIVIYGAGGAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp HHHHHHHHHHHHHCCCCSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred CHHHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHHHCC-CEEEEECC
Confidence 5454444443 235789999999999999999999999 99998764
No 413
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=89.06 E-value=0.28 Score=44.49 Aligned_cols=34 Identities=24% Similarity=0.249 Sum_probs=31.1
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCc
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 75 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~ 75 (358)
.++.|||+|.+|.-+|..|.+.|.+|+++.|.+.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~~ 36 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAK 36 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSCE
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEeccC
Confidence 4799999999999999999999999999998753
No 414
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=89.06 E-value=0.44 Score=43.51 Aligned_cols=49 Identities=27% Similarity=0.316 Sum_probs=36.8
Q ss_pred CHHHHHHHHHHH-hcCCCCcEEEEcCc-HHHHHHHHHHHhCCCcEEEEeeC
Q 018320 25 DLADANRLVNVM-KSCSGGNAVVIGGG-YIGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 25 ~~~da~~i~~~l-~~~~~~~vvVIGgG-~~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
|..-+.++.+.. -...+++++|||.| .+|.-+|..|.+.|+.||++++.
T Consensus 148 Tp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~ 198 (300)
T 4a26_A 148 TAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSG 198 (300)
T ss_dssp HHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 334444444433 23478999999965 58999999999999999999874
No 415
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=88.99 E-value=0.43 Score=43.68 Aligned_cols=35 Identities=17% Similarity=0.223 Sum_probs=31.6
Q ss_pred CCCcEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 40 SGGNAVVIGG-GYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 40 ~~~~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
++++++|.|| |++|..++..|.+.|.+|+++.|.+
T Consensus 19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (330)
T 2pzm_A 19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFA 54 (330)
T ss_dssp TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 5678999997 9999999999999999999998854
No 416
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=88.99 E-value=0.4 Score=46.66 Aligned_cols=32 Identities=25% Similarity=0.402 Sum_probs=29.9
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeC
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
-+++|+|+|-.|..+|..|...|.+|+++++.
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d 35 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENNDITIVDKD 35 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTEEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 47999999999999999999999999999864
No 417
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=88.99 E-value=1.7 Score=38.64 Aligned_cols=59 Identities=14% Similarity=-0.002 Sum_probs=40.3
Q ss_pred CCCcEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeCCcccCcc---CCHHHHHHHHHHHHhCCC
Q 018320 40 SGGNAVVIGG-GYIGMECAASLVINKINVTMVFPEAHCMARL---FTPKIASYYEEYYKSKGV 98 (358)
Q Consensus 40 ~~~~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~---~~~~~~~~~~~~l~~~gV 98 (358)
++|.++|.|| |.+|.++|..|++.|.+|.++.+........ -..+-.+.....+++.+.
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGR 71 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTS
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCC
Confidence 5788999985 6899999999999999999998764322110 123334444455555543
No 418
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=88.92 E-value=0.51 Score=43.49 Aligned_cols=37 Identities=16% Similarity=0.150 Sum_probs=33.7
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcc
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHC 76 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~ 76 (358)
.++++.|||-|.+|-.+|..|...|.+|+.+.+.+..
T Consensus 138 ~g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~ 174 (315)
T 3pp8_A 138 EEFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKS 174 (315)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchh
Confidence 5789999999999999999999999999999887653
No 419
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=88.89 E-value=0.33 Score=47.61 Aligned_cols=35 Identities=20% Similarity=0.352 Sum_probs=32.0
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeC
Q 018320 39 CSGGNAVVIGGGYIGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 39 ~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
..+++|+|+|.|.+|..+|..++..|.+|+++++.
T Consensus 272 l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~ 306 (494)
T 3ce6_A 272 IGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEID 306 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 36899999999999999999999999999988764
No 420
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=88.83 E-value=0.36 Score=46.27 Aligned_cols=50 Identities=18% Similarity=0.276 Sum_probs=39.1
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHHHHHHHHHHHhCCCEEEcC
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKG 103 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~~ 103 (358)
..+|+|+|.|..|..+|..|.+.|.+|+++++.+ +.. +.+++.|+.++.+
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~---------~~v----~~~~~~g~~vi~G 53 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP---------DHI----ETLRKFGMKVFYG 53 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH---------HHH----HHHHHTTCCCEES
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH---------HHH----HHHHhCCCeEEEc
Confidence 4689999999999999999999999999998643 322 2344567776654
No 421
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=88.76 E-value=0.4 Score=43.39 Aligned_cols=34 Identities=15% Similarity=0.147 Sum_probs=28.9
Q ss_pred CCcEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 41 GGNAVVIGG-GYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 41 ~~~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
+++++|.|| |++|..++..|.+.|.+|+++.|.+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRR 36 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCC
Confidence 478999997 9999999999999999999998653
No 422
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=88.72 E-value=0.51 Score=43.78 Aligned_cols=35 Identities=20% Similarity=0.132 Sum_probs=32.0
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
.++++.|||.|.+|..+|..|+..|.+|+++.+.+
T Consensus 149 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 183 (334)
T 2dbq_A 149 YGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTR 183 (334)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCc
Confidence 57899999999999999999999999999988754
No 423
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=88.65 E-value=0.49 Score=41.87 Aligned_cols=35 Identities=26% Similarity=0.288 Sum_probs=30.6
Q ss_pred CCCcEEEEcC-cH--HHHHHHHHHHhCCCcEEEEeeCC
Q 018320 40 SGGNAVVIGG-GY--IGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 40 ~~~~vvVIGg-G~--~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
++|+++|.|+ |. +|.++|..|++.|.+|.++.|.+
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~ 43 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGE 43 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCch
Confidence 5788999996 56 99999999999999999987753
No 424
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=88.64 E-value=0.52 Score=40.89 Aligned_cols=34 Identities=29% Similarity=0.291 Sum_probs=30.6
Q ss_pred CCCcEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeC
Q 018320 40 SGGNAVVIGG-GYIGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 40 ~~~~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
++++++|.|+ |.+|.++|..|.+.|.+|+++.|.
T Consensus 6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 1cyd_A 6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRT 40 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 5788999986 899999999999999999998774
No 425
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=88.64 E-value=0.44 Score=43.43 Aligned_cols=35 Identities=23% Similarity=0.192 Sum_probs=31.6
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHhCCC-cEEEEeeC
Q 018320 39 CSGGNAVVIGGGYIGMECAASLVINKI-NVTMVFPE 73 (358)
Q Consensus 39 ~~~~~vvVIGgG~~gle~A~~L~~~g~-~Vtlv~~~ 73 (358)
..+++++|+|+|.+|..+|..|.+.|. +|+++.|.
T Consensus 139 l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 139 LDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 357899999999999999999999998 89998775
No 426
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=88.61 E-value=0.68 Score=41.95 Aligned_cols=46 Identities=17% Similarity=0.137 Sum_probs=37.4
Q ss_pred HHHHHHHHHhc----CCCCcEEEEcCcHHHHHHHHHHHhCCC-cEEEEeeC
Q 018320 28 DANRLVNVMKS----CSGGNAVVIGGGYIGMECAASLVINKI-NVTMVFPE 73 (358)
Q Consensus 28 da~~i~~~l~~----~~~~~vvVIGgG~~gle~A~~L~~~g~-~Vtlv~~~ 73 (358)
|..-+...++. ..+++++|+|+|-+|--++..|.+.|. +|+++.|.
T Consensus 105 D~~G~~~~L~~~~~~~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt 155 (282)
T 3fbt_A 105 DYIGFGKMLSKFRVEIKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRN 155 (282)
T ss_dssp HHHHHHHHHHHTTCCCTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESC
T ss_pred cHHHHHHHHHHcCCCccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 55555555543 257899999999999999999999998 89999875
No 427
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=88.59 E-value=0.34 Score=44.87 Aligned_cols=32 Identities=25% Similarity=0.146 Sum_probs=29.7
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeC
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
.++.|||+|.+|..+|..|++.|.+|+++.|.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 58999999999999999999999999998764
No 428
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=88.58 E-value=1.4 Score=39.55 Aligned_cols=51 Identities=22% Similarity=0.423 Sum_probs=37.7
Q ss_pred CCCcEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHHHHHHHHHHHhCCC
Q 018320 40 SGGNAVVIGG-GYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGV 98 (358)
Q Consensus 40 ~~~~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gV 98 (358)
++|.++|.|| |.+|.++|..|++.|.+|.++.+... ...+.+.+.+++.|.
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~--------~~~~~~~~~~~~~~~ 97 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEE--------GDANETKQYVEKEGV 97 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCH--------HHHHHHHHHHHTTTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--------HHHHHHHHHHHhcCC
Confidence 5788999985 78999999999999999999887532 223344455555553
No 429
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=88.58 E-value=0.53 Score=40.89 Aligned_cols=34 Identities=24% Similarity=0.244 Sum_probs=30.5
Q ss_pred CCCcEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeC
Q 018320 40 SGGNAVVIGG-GYIGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 40 ~~~~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
++++++|.|+ |.+|.++|..|.+.|.+|.++.|.
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 3d3w_A 6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRT 40 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5788999986 899999999999999999998764
No 430
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=88.55 E-value=0.34 Score=42.88 Aligned_cols=34 Identities=21% Similarity=0.260 Sum_probs=30.6
Q ss_pred CCCcEEEEcC-cH-HHHHHHHHHHhCCCcEEEEeeC
Q 018320 40 SGGNAVVIGG-GY-IGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 40 ~~~~vvVIGg-G~-~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
++|+++|.|| |. +|.++|..|.+.|.+|.++.|.
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~ 56 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYH 56 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCC
Confidence 5789999998 74 9999999999999999998775
No 431
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=88.54 E-value=1.9 Score=38.30 Aligned_cols=59 Identities=15% Similarity=0.121 Sum_probs=40.9
Q ss_pred CCCcEEEEc-CcHHHHHHHHHHHhCCCcEEEEeeCCcccC---ccCCHHHHHHHHHHHHhCCC
Q 018320 40 SGGNAVVIG-GGYIGMECAASLVINKINVTMVFPEAHCMA---RLFTPKIASYYEEYYKSKGV 98 (358)
Q Consensus 40 ~~~~vvVIG-gG~~gle~A~~L~~~g~~Vtlv~~~~~~l~---~~~~~~~~~~~~~~l~~~gV 98 (358)
++|.++|.| +|.+|.++|..|++.|.+|.++.|.+.... .....+-.+...+.+++.+.
T Consensus 9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (281)
T 3s55_A 9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGR 71 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCC
Confidence 578899998 578999999999999999999988643211 01234444445555665553
No 432
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=88.50 E-value=0.5 Score=44.50 Aligned_cols=35 Identities=17% Similarity=0.096 Sum_probs=31.3
Q ss_pred cCCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEee
Q 018320 38 SCSGGNAVVIGGGYIGMECAASLVINKINVTMVFP 72 (358)
Q Consensus 38 ~~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~ 72 (358)
+..+++|+|+|.|.+|..+|..|.+.|.+|++.++
T Consensus 170 ~L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~ 204 (364)
T 1leh_A 170 SLEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDV 204 (364)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcC
Confidence 45789999999999999999999999999986653
No 433
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=88.41 E-value=0.45 Score=43.15 Aligned_cols=48 Identities=21% Similarity=0.316 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHh-cCCCCcEEEEcCcH-HHHHHHHHHHhCCCcEEEEeeC
Q 018320 26 LADANRLVNVMK-SCSGGNAVVIGGGY-IGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 26 ~~da~~i~~~l~-~~~~~~vvVIGgG~-~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
...+.++.+... ...+++++|||.|. +|.-+|..|.+.|+.||++++.
T Consensus 144 p~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~ 193 (285)
T 3p2o_A 144 PLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIK 193 (285)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred HHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 333444444332 34789999999655 7999999999999999999864
No 434
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=88.35 E-value=0.49 Score=47.09 Aligned_cols=59 Identities=15% Similarity=0.164 Sum_probs=34.7
Q ss_pred eEEecCHHHHHHHHHHHhcC-CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccC
Q 018320 20 VCYLRDLADANRLVNVMKSC-SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMA 78 (358)
Q Consensus 20 v~~l~~~~da~~i~~~l~~~-~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~ 78 (358)
++.+-+.++..++.+.+... +.++++|+|+|..|..+|..|.+.|.+|+++++.+....
T Consensus 326 L~v~g~~~~l~~~~~~~~~~~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~ 385 (565)
T 4gx0_A 326 LVLAGTKSQLAALEYLIGEAPEDELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVC 385 (565)
T ss_dssp ---------------------CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSC
T ss_pred EEEEeCHHHHHHHHHHhcCCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHh
Confidence 44444555555555544321 238999999999999999999999999999998876544
No 435
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=88.32 E-value=2.1 Score=38.06 Aligned_cols=59 Identities=14% Similarity=0.055 Sum_probs=40.7
Q ss_pred CCCcEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeCCcccC----ccCCHHHHHHHHHHHHhCCC
Q 018320 40 SGGNAVVIGG-GYIGMECAASLVINKINVTMVFPEAHCMA----RLFTPKIASYYEEYYKSKGV 98 (358)
Q Consensus 40 ~~~~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~~~~l~----~~~~~~~~~~~~~~l~~~gV 98 (358)
.+|.++|.|| |.+|.++|..|++.|.+|.++.+...... ..-+++-.+...+.+...+.
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANR 73 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCC
Confidence 5788999985 78999999999999999999987533211 00144444555555665553
No 436
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=88.29 E-value=0.21 Score=43.54 Aligned_cols=33 Identities=18% Similarity=0.246 Sum_probs=29.3
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
.++++|+|+|.+|..+|..|.+.|. |+++++.+
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 4689999999999999999999999 99998754
No 437
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=88.27 E-value=0.45 Score=43.51 Aligned_cols=35 Identities=20% Similarity=0.168 Sum_probs=31.6
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCc
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 75 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~ 75 (358)
-.+|.|||.|.+|..+|..|.+.|.+|+++.+.+.
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 46899999999999999999999999999987653
No 438
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=88.24 E-value=0.49 Score=43.68 Aligned_cols=36 Identities=25% Similarity=0.384 Sum_probs=29.9
Q ss_pred CCCcEEEEcC-cHHHHHHHHHHHhCC-CcEEEEeeCCc
Q 018320 40 SGGNAVVIGG-GYIGMECAASLVINK-INVTMVFPEAH 75 (358)
Q Consensus 40 ~~~~vvVIGg-G~~gle~A~~L~~~g-~~Vtlv~~~~~ 75 (358)
++++|+|.|| |++|..++..|.+.| .+|+++.|.+.
T Consensus 45 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~ 82 (357)
T 2x6t_A 45 EGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKD 82 (357)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCC
Confidence 4678999997 999999999999999 99999987643
No 439
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=88.17 E-value=0.5 Score=43.20 Aligned_cols=33 Identities=21% Similarity=0.222 Sum_probs=30.2
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCC--cEEEEeeC
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKI--NVTMVFPE 73 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~--~Vtlv~~~ 73 (358)
..+|+|||+|.+|.-+|..|++.|. +|+++.+.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4689999999999999999999998 99999875
No 440
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=88.17 E-value=1.3 Score=38.59 Aligned_cols=50 Identities=28% Similarity=0.288 Sum_probs=37.1
Q ss_pred CCCcEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHHHHHHHHHHHhCCC
Q 018320 40 SGGNAVVIGG-GYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGV 98 (358)
Q Consensus 40 ~~~~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gV 98 (358)
.+|+++|.|| |.+|.++|..|++.|.+|.++.|.+ +-.+.+.+.+++.+.
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~---------~~~~~~~~~~~~~~~ 54 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQ---------ASAEKFENSMKEKGF 54 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSH---------HHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH---------HHHHHHHHHHHhcCC
Confidence 4688888884 7899999999999999999987643 223344555665553
No 441
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=88.14 E-value=0.37 Score=46.82 Aligned_cols=35 Identities=23% Similarity=0.401 Sum_probs=32.0
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCc
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 75 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~ 75 (358)
-++|.|||+|..|..+|..|++.|.+|+++++.+.
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 37899999999999999999999999999988654
No 442
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=88.10 E-value=0.62 Score=40.90 Aligned_cols=36 Identities=19% Similarity=0.181 Sum_probs=31.4
Q ss_pred CCCCcEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 39 CSGGNAVVIGG-GYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 39 ~~~~~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
.++|+++|.|+ |.+|.++|..|++.|.+|.++.|.+
T Consensus 17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~ 53 (249)
T 1o5i_A 17 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNE 53 (249)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 36789999985 7999999999999999999988753
No 443
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=88.04 E-value=0.52 Score=42.45 Aligned_cols=34 Identities=32% Similarity=0.364 Sum_probs=30.4
Q ss_pred CcEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeCCc
Q 018320 42 GNAVVIGG-GYIGMECAASLVINKINVTMVFPEAH 75 (358)
Q Consensus 42 ~~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~~~ 75 (358)
++|+|.|| |++|..++..|.+.|.+|+++.|.+.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 35 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSS 35 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 46899997 99999999999999999999987654
No 444
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=87.98 E-value=0.54 Score=46.06 Aligned_cols=49 Identities=14% Similarity=0.073 Sum_probs=37.9
Q ss_pred HHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEEcCCCcEEecCeEEEeeCCC
Q 018320 90 EEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVNLRDGNRLPTDMVVVGIGIR 140 (358)
Q Consensus 90 ~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~~~~g~~i~~D~vi~a~G~~ 140 (358)
+...++.|+++++++.|++|+.++ +.+ .|.+.+|+++.+|.||++++..
T Consensus 219 ~~l~~~lg~~i~~~~~V~~i~~~~-~~v-~v~~~~g~~~~ad~VI~a~p~~ 267 (520)
T 1s3e_A 219 ERIMDLLGDRVKLERPVIYIDQTR-ENV-LVETLNHEMYEAKYVISAIPPT 267 (520)
T ss_dssp HHHHHHHGGGEESSCCEEEEECSS-SSE-EEEETTSCEEEESEEEECSCGG
T ss_pred HHHHHHcCCcEEcCCeeEEEEECC-CeE-EEEECCCeEEEeCEEEECCCHH
Confidence 333344488999999999998643 444 4788899999999999999854
No 445
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=87.97 E-value=0.48 Score=42.42 Aligned_cols=36 Identities=11% Similarity=0.194 Sum_probs=31.0
Q ss_pred CCCCcEEEEcC-cH--HHHHHHHHHHhCCCcEEEEeeCC
Q 018320 39 CSGGNAVVIGG-GY--IGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 39 ~~~~~vvVIGg-G~--~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
.++|.++|.|| |. +|.++|..|++.|.+|.++.|..
T Consensus 24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~ 62 (280)
T 3nrc_A 24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ 62 (280)
T ss_dssp TTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch
Confidence 35788888885 56 99999999999999999998864
No 446
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=87.93 E-value=1.6 Score=38.75 Aligned_cols=54 Identities=17% Similarity=0.116 Sum_probs=40.5
Q ss_pred CCCCcEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHHHHHHHHHHHhCCCEEE
Q 018320 39 CSGGNAVVIGG-GYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFV 101 (358)
Q Consensus 39 ~~~~~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~ 101 (358)
.++|.++|-|| +-+|.++|..|++.|.+|.++.+. ++-.+.+.+.+++.|.+.+
T Consensus 5 L~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~---------~~~~~~~~~~i~~~g~~~~ 59 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELL---------EDRLNQIVQELRGMGKEVL 59 (254)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---------HHHHHHHHHHHHHTTCCEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECC---------HHHHHHHHHHHHhcCCcEE
Confidence 36888888885 569999999999999999998763 3344556666777765443
No 447
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=87.93 E-value=0.43 Score=45.89 Aligned_cols=35 Identities=31% Similarity=0.365 Sum_probs=32.1
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
.+++++|+|.|.+|..+|..|...|.+|+++++.+
T Consensus 210 ~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p 244 (436)
T 3h9u_A 210 AGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDP 244 (436)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCh
Confidence 58999999999999999999999999999987643
No 448
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=87.92 E-value=0.5 Score=42.82 Aligned_cols=35 Identities=29% Similarity=0.348 Sum_probs=30.9
Q ss_pred CCCCcEEEEcCcH-HHHHHHHHHHhCCCcEEEEeeC
Q 018320 39 CSGGNAVVIGGGY-IGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 39 ~~~~~vvVIGgG~-~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
..+++++|||.|. +|.-+|..|.+.|+.||+.++.
T Consensus 159 l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 194 (285)
T 3l07_A 159 TEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF 194 (285)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence 4789999999655 7999999999999999999754
No 449
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=87.92 E-value=0.4 Score=48.11 Aligned_cols=33 Identities=30% Similarity=0.497 Sum_probs=30.2
Q ss_pred CcEEEEcCcHHHHHHHHHHHhC-CCcEEEEeeCC
Q 018320 42 GNAVVIGGGYIGMECAASLVIN-KINVTMVFPEA 74 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~-g~~Vtlv~~~~ 74 (358)
-.+||||||..|+-+|..|++. +.+|.|+|.++
T Consensus 20 yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 20 VDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred ccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 3799999999999999999975 78999999987
No 450
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=87.84 E-value=2.2 Score=38.41 Aligned_cols=59 Identities=15% Similarity=0.067 Sum_probs=41.2
Q ss_pred CCCcEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeCCcccCc---cCCHHHHHHHHHHHHhCCC
Q 018320 40 SGGNAVVIGG-GYIGMECAASLVINKINVTMVFPEAHCMAR---LFTPKIASYYEEYYKSKGV 98 (358)
Q Consensus 40 ~~~~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~~~~l~~---~~~~~~~~~~~~~l~~~gV 98 (358)
.+|.++|.|| +.+|.++|..|++.|.+|.++.+.+..... .-+++-.+...+.++..|.
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGR 89 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCC
Confidence 5788999885 689999999999999999999886432110 0234444555555666554
No 451
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=87.83 E-value=3 Score=38.12 Aligned_cols=79 Identities=19% Similarity=0.213 Sum_probs=60.2
Q ss_pred CCeEEecCHHHHHHHHHHHhcCCCCcEEEEcCc--HHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHHHHHHHHHHHh
Q 018320 18 ENVCYLRDLADANRLVNVMKSCSGGNAVVIGGG--YIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKS 95 (358)
Q Consensus 18 ~~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG--~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~ 95 (358)
.+-+..-.+.|...+++.+...++.++++||-+ .++-.++..+++.|.+|+++.+... . .++++.+.+++..++
T Consensus 125 ~~~HPtQaLaDl~Ti~e~~g~l~gl~va~vGD~~~rva~Sl~~~~~~~g~~v~~~~P~~~-~---~~~~~~~~~~~~a~~ 200 (307)
T 2i6u_A 125 DEFHPCQVLADLQTIAERKGALRGLRLSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGF-L---PDPSVRAAAERRAQD 200 (307)
T ss_dssp SSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEECCTTS-C---CCHHHHHHHHHHHHH
T ss_pred CCcCccHHHHHHHHHHHHhCCcCCeEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccc-c---CCHHHHHHHHHHHHH
Confidence 344555567899999998877788999999985 8999999999999999999987543 2 245566666666667
Q ss_pred CCCEE
Q 018320 96 KGVKF 100 (358)
Q Consensus 96 ~gV~v 100 (358)
.|.++
T Consensus 201 ~G~~~ 205 (307)
T 2i6u_A 201 TGASV 205 (307)
T ss_dssp HTCCE
T ss_pred cCCeE
Confidence 77444
No 452
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=87.80 E-value=1 Score=40.48 Aligned_cols=46 Identities=9% Similarity=0.094 Sum_probs=36.9
Q ss_pred HHHHHHHH-Hhc----CCCCcEEEEcCcHHHHHHHHHHHhCCC-cEEEEeeC
Q 018320 28 DANRLVNV-MKS----CSGGNAVVIGGGYIGMECAASLVINKI-NVTMVFPE 73 (358)
Q Consensus 28 da~~i~~~-l~~----~~~~~vvVIGgG~~gle~A~~L~~~g~-~Vtlv~~~ 73 (358)
|..-+... ++. ..+++++|+|+|-+|-.++..|.+.|. +|+++.|.
T Consensus 102 D~~G~~~~lL~~~~~~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~ 153 (272)
T 3pwz_A 102 DGIGLLRDIEENLGEPLRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRD 153 (272)
T ss_dssp HHHHHHHHHHTTSCCCCTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CHHHHHHHHHHHcCCCccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 55556554 542 257899999999999999999999996 89998774
No 453
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=87.79 E-value=0.54 Score=40.05 Aligned_cols=32 Identities=16% Similarity=0.197 Sum_probs=29.1
Q ss_pred cEEEEc-CcHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 43 NAVVIG-GGYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 43 ~vvVIG-gG~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
++.|+| +|.+|..+|..|.+.|.+|+++.|.+
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 689999 99999999999999999999988753
No 454
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=87.77 E-value=0.54 Score=41.95 Aligned_cols=35 Identities=14% Similarity=0.238 Sum_probs=31.5
Q ss_pred CCCcEEEEcC---cHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 40 SGGNAVVIGG---GYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 40 ~~~~vvVIGg---G~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
.+|+++|.|+ |.+|.++|..|++.|.+|.++.|.+
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~ 42 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE 42 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5789999997 6999999999999999999998865
No 455
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=87.75 E-value=0.22 Score=49.69 Aligned_cols=43 Identities=23% Similarity=0.237 Sum_probs=34.8
Q ss_pred EEEeccccC-CCCcEEEEcccccccccccCcccccccHHHHHHHHHHHHHHHcC
Q 018320 157 IKVTGRLQS-SNSSVYAVGDVAAFPLKLLGETRRLEHVDSARKSAKHAVAAIME 209 (358)
Q Consensus 157 i~vd~~~~t-~~~~VyAiGD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 209 (358)
|..|+.++| +.+++|++||++++.. .+..|..+|..+|+.|+.
T Consensus 497 i~~~~~~~~~~~~gly~~GegaG~a~----------gi~~Aa~~G~~~a~~i~~ 540 (549)
T 3nlc_A 497 IKRGKDFQSVNLKGFYPAGEGAGYAG----------GILSAGIDGIKVAEAVAR 540 (549)
T ss_dssp CCCTTTTSCTTCBTEEECHHHHTSCC----------SHHHHHHHHHHHHHHHHH
T ss_pred EEECCCceECCcCCEEEccccCChhh----------HHHHHHHHHHHHHHHHHH
Confidence 667889999 8999999999998754 355677788888887753
No 456
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=87.75 E-value=1.6 Score=39.46 Aligned_cols=34 Identities=26% Similarity=0.379 Sum_probs=30.3
Q ss_pred CCCcEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeC
Q 018320 40 SGGNAVVIGG-GYIGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 40 ~~~~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
.+|.++|.|| |.+|.++|..|++.|.+|.++.|.
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~ 64 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVD 64 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 5788999985 789999999999999999998764
No 457
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=87.74 E-value=1.4 Score=39.48 Aligned_cols=52 Identities=17% Similarity=0.141 Sum_probs=37.6
Q ss_pred CCCCcEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHHHHHHHHHHHhCCC
Q 018320 39 CSGGNAVVIGG-GYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGV 98 (358)
Q Consensus 39 ~~~~~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gV 98 (358)
..+|.++|.|| |.+|.++|..|++.|.+|.++.+.+ ++-.+.+.+.+...|.
T Consensus 27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~--------~~~~~~~~~~~~~~~~ 79 (280)
T 4da9_A 27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGD--------AEGVAPVIAELSGLGA 79 (280)
T ss_dssp CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCC--------HHHHHHHHHHHHHTTC
T ss_pred cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCC--------HHHHHHHHHHHHhcCC
Confidence 35778888884 7899999999999999999987532 2333444455555543
No 458
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=87.70 E-value=0.39 Score=42.91 Aligned_cols=34 Identities=18% Similarity=0.200 Sum_probs=30.3
Q ss_pred CCCcEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeC
Q 018320 40 SGGNAVVIGG-GYIGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 40 ~~~~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
.+++|+|.|| |++|..++..|.+.|.+|+++.|.
T Consensus 11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~ 45 (292)
T 1vl0_A 11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ 45 (292)
T ss_dssp -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT
T ss_pred ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc
Confidence 4689999985 999999999999999999999875
No 459
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=87.70 E-value=0.6 Score=43.23 Aligned_cols=35 Identities=20% Similarity=0.151 Sum_probs=31.9
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
.++++.|||.|.+|..+|..|...|.+|+++.+.+
T Consensus 154 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 188 (330)
T 2gcg_A 154 TQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQ 188 (330)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 57899999999999999999999999999998754
No 460
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=87.70 E-value=0.63 Score=43.20 Aligned_cols=36 Identities=22% Similarity=0.254 Sum_probs=32.6
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCc
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 75 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~ 75 (358)
.++++.|||.|.+|..+|..|...|.+|+++.+.+.
T Consensus 163 ~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~ 198 (333)
T 3ba1_A 163 SGKRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKK 198 (333)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCch
Confidence 578999999999999999999999999999887653
No 461
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=87.68 E-value=0.39 Score=46.75 Aligned_cols=35 Identities=26% Similarity=0.237 Sum_probs=31.5
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCc
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 75 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~ 75 (358)
-++|.|||+|..|.-+|..|++.|.+|+++++.+.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~ 71 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 71 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 36799999999999999999999999999987653
No 462
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=87.68 E-value=0.62 Score=42.76 Aligned_cols=35 Identities=23% Similarity=0.400 Sum_probs=31.1
Q ss_pred CCCcEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 40 SGGNAVVIGG-GYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 40 ~~~~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
..++|+|.|+ |++|..++..|.+.|.+|+++.|.+
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 61 (343)
T 2b69_A 26 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFF 61 (343)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4689999997 9999999999999999999998754
No 463
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=87.68 E-value=2.7 Score=39.33 Aligned_cols=79 Identities=16% Similarity=0.194 Sum_probs=59.6
Q ss_pred EEecCHHHHHHHHHHHhcCCCCcEEEEcCc--HHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHHHHHHHHHHHhCCC
Q 018320 21 CYLRDLADANRLVNVMKSCSGGNAVVIGGG--YIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGV 98 (358)
Q Consensus 21 ~~l~~~~da~~i~~~l~~~~~~~vvVIGgG--~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gV 98 (358)
+..-.+.|+..+++.+...++.++++||-+ .++-.++..+++.|.+|+++.+... .+. .++++.+.+++..++.|.
T Consensus 160 HPtQaLaDl~Ti~E~~G~l~glkva~vGD~~nnva~Sl~~~~~~lG~~v~~~~P~~~-~p~-~~~~~~~~~~~~~~~~g~ 237 (365)
T 4amu_A 160 HPTQIIADFMTMKEKFGNLKNKKIVFIGDYKNNVGVSTMIGAAFNGMHVVMCGPDNY-KNE-IDKNVLAKCIELFKRNGG 237 (365)
T ss_dssp CHHHHHHHHHHHHHHHSSCTTCEEEEESSTTSHHHHHHHHHHHHTTCEEEEESCGGG-GGG-SCHHHHHHHHHHHHHHSC
T ss_pred CcHHHHHHHHHHHHHhCCCCCCEEEEECCCCcchHHHHHHHHHHcCCEEEEECCccc-cCC-CcHHHHHHHHHHHHHcCC
Confidence 344456788889888877789999999987 6778888889999999999987543 222 367777777777777776
Q ss_pred EEE
Q 018320 99 KFV 101 (358)
Q Consensus 99 ~v~ 101 (358)
.+.
T Consensus 238 ~i~ 240 (365)
T 4amu_A 238 SLR 240 (365)
T ss_dssp EEE
T ss_pred EEE
Confidence 553
No 464
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=87.67 E-value=0.37 Score=47.15 Aligned_cols=34 Identities=24% Similarity=0.258 Sum_probs=31.1
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
.-+|.|||.|++|+-+|..|++.|.+|+++.+.+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4689999999999999999999999999998753
No 465
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=87.66 E-value=1.6 Score=38.52 Aligned_cols=34 Identities=12% Similarity=0.097 Sum_probs=29.9
Q ss_pred CCCcEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeC
Q 018320 40 SGGNAVVIGG-GYIGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 40 ~~~~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
++|.++|.|+ |.+|.++|..|++.|.+|.++.|.
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 44 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQGADLVLAART 44 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC
Confidence 5788999985 679999999999999999998764
No 466
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=87.65 E-value=1.3 Score=39.39 Aligned_cols=51 Identities=20% Similarity=0.162 Sum_probs=37.3
Q ss_pred CCCcEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHHHHHHHHHHHhCCC
Q 018320 40 SGGNAVVIGG-GYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGV 98 (358)
Q Consensus 40 ~~~~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gV 98 (358)
.+|.++|.|| |.+|.++|..|++.|.+|.++.+.. ++..+.+.+.+++.+.
T Consensus 27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~--------~~~~~~~~~~~~~~~~ 78 (269)
T 4dmm_A 27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASS--------AGAADEVVAAIAAAGG 78 (269)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC--------HHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCC--------hHHHHHHHHHHHhcCC
Confidence 5788888874 7899999999999999999887642 2333445555665543
No 467
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=87.62 E-value=0.57 Score=43.47 Aligned_cols=36 Identities=19% Similarity=0.189 Sum_probs=32.6
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 39 CSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 39 ~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
..++++.|||.|.+|..+|..|...|.+|+++.+.+
T Consensus 144 l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~ 179 (333)
T 2d0i_A 144 LYGKKVGILGMGAIGKAIARRLIPFGVKLYYWSRHR 179 (333)
T ss_dssp STTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCc
Confidence 467899999999999999999999999999988754
No 468
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=87.60 E-value=1.9 Score=38.28 Aligned_cols=53 Identities=25% Similarity=0.310 Sum_probs=38.4
Q ss_pred CCCCcEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHHHHHHHHHHHhCCCE
Q 018320 39 CSGGNAVVIGG-GYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVK 99 (358)
Q Consensus 39 ~~~~~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~ 99 (358)
..+|.++|.|| |.+|.++|..|++.|.+|.++.+.+ .+..+.+.+.+++.|.+
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~--------~~~~~~~~~~l~~~~~~ 82 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNA--------AERAQAVVSEIEQAGGR 82 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC--------HHHHHHHHHHHHHTTCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCC--------HHHHHHHHHHHHhcCCc
Confidence 36788999985 7899999999999999999886542 23334445556655543
No 469
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=87.60 E-value=0.68 Score=42.42 Aligned_cols=35 Identities=26% Similarity=0.286 Sum_probs=31.9
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
.++++.|||.|.+|..+|..|...|.+|+.+.+.+
T Consensus 141 ~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~ 175 (307)
T 1wwk_A 141 EGKTIGIIGFGRIGYQVAKIANALGMNILLYDPYP 175 (307)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCceEEEEccCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 57899999999999999999999999999887753
No 470
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=87.47 E-value=0.46 Score=43.25 Aligned_cols=33 Identities=18% Similarity=0.108 Sum_probs=30.3
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeC
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
..+|.|||.|.+|.-+|..|.+.|.+|+++.|.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~ 39 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLN 39 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 468999999999999999999999999998764
No 471
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=87.44 E-value=0.35 Score=43.10 Aligned_cols=31 Identities=13% Similarity=0.260 Sum_probs=28.8
Q ss_pred cEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeC
Q 018320 43 NAVVIGG-GYIGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 43 ~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
+++|.|| |++|..++..|.+.|.+|+.+.|.
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK 38 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc
Confidence 8999995 999999999999999999999884
No 472
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=87.43 E-value=0.34 Score=43.65 Aligned_cols=34 Identities=26% Similarity=0.226 Sum_probs=30.9
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCc
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 75 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~ 75 (358)
++|.|||.|.+|..+|..|.+.|.+|+++.|.+.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 4799999999999999999999999999987653
No 473
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=87.41 E-value=0.57 Score=42.59 Aligned_cols=33 Identities=21% Similarity=0.241 Sum_probs=30.4
Q ss_pred CcEEEEc-CcHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 42 GNAVVIG-GGYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 42 ~~vvVIG-gG~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
++|.||| .|.+|..+|..|.+.|.+|+++.+.+
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 5899999 99999999999999999999997654
No 474
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=87.39 E-value=0.87 Score=41.54 Aligned_cols=36 Identities=28% Similarity=0.467 Sum_probs=31.6
Q ss_pred CCCcEEEEc-CcHHHHHHHHHHHhCCCcEEEEeeCCc
Q 018320 40 SGGNAVVIG-GGYIGMECAASLVINKINVTMVFPEAH 75 (358)
Q Consensus 40 ~~~~vvVIG-gG~~gle~A~~L~~~g~~Vtlv~~~~~ 75 (358)
..++++|.| +|++|..++..|.+.|.+|+++.|.+.
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 40 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVN 40 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSS
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCc
Confidence 357899998 599999999999999999999988654
No 475
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=87.38 E-value=1.8 Score=38.32 Aligned_cols=34 Identities=21% Similarity=0.176 Sum_probs=30.3
Q ss_pred CCCcEEEEc-CcHHHHHHHHHHHhCCCcEEEEeeC
Q 018320 40 SGGNAVVIG-GGYIGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 40 ~~~~vvVIG-gG~~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
.+|+++|.| +|.+|.++|..|.+.|.+|+++.|.
T Consensus 30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~ 64 (272)
T 1yb1_A 30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDIN 64 (272)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcC
Confidence 578899998 5799999999999999999998774
No 476
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=87.37 E-value=0.72 Score=42.41 Aligned_cols=36 Identities=17% Similarity=0.085 Sum_probs=32.3
Q ss_pred CCCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 39 CSGGNAVVIGGGYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 39 ~~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
..++++.|||.|.+|..+|..|...|.+|+.+.+.+
T Consensus 140 l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~ 175 (313)
T 2ekl_A 140 LAGKTIGIVGFGRIGTKVGIIANAMGMKVLAYDILD 175 (313)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCc
Confidence 367899999999999999999999999999887653
No 477
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=87.35 E-value=0.64 Score=42.31 Aligned_cols=36 Identities=22% Similarity=0.122 Sum_probs=31.1
Q ss_pred CCCcEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeCCc
Q 018320 40 SGGNAVVIGG-GYIGMECAASLVINKINVTMVFPEAH 75 (358)
Q Consensus 40 ~~~~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~~~ 75 (358)
++++|+|.|| |++|..++..|.+.|.+|+++.|.+.
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 49 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRS 49 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCS
T ss_pred cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCc
Confidence 4689999985 99999999999999999999988654
No 478
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=87.34 E-value=0.42 Score=46.36 Aligned_cols=33 Identities=24% Similarity=0.358 Sum_probs=30.4
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
.+|.|||.|.+|.-+|..|++.|.+|+++.+.+
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 479999999999999999999999999998754
No 479
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=87.31 E-value=1.2 Score=39.02 Aligned_cols=35 Identities=29% Similarity=0.396 Sum_probs=30.7
Q ss_pred CCCcEEEEc-CcHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 40 SGGNAVVIG-GGYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 40 ~~~~vvVIG-gG~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
++|.++|.| +|.+|.++|..|++.|.+|.++.|.+
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~ 41 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNG 41 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 578899988 46899999999999999999998754
No 480
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=87.31 E-value=0.6 Score=40.35 Aligned_cols=36 Identities=14% Similarity=0.241 Sum_probs=32.2
Q ss_pred CCCcEEEEc-CcHHHHHHHHHHHhCCC--cEEEEeeCCc
Q 018320 40 SGGNAVVIG-GGYIGMECAASLVINKI--NVTMVFPEAH 75 (358)
Q Consensus 40 ~~~~vvVIG-gG~~gle~A~~L~~~g~--~Vtlv~~~~~ 75 (358)
.+++++|.| +|.+|..++..|.+.|. +|+++.|.+.
T Consensus 17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~ 55 (242)
T 2bka_A 17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKL 55 (242)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCC
T ss_pred cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCC
Confidence 468999999 59999999999999999 9999988764
No 481
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=87.26 E-value=0.43 Score=43.34 Aligned_cols=35 Identities=20% Similarity=0.022 Sum_probs=31.8
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCc
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 75 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~ 75 (358)
..+|.|||.|.+|..+|..|.+.|.+|+++.+.+.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 36899999999999999999999999999988654
No 482
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=87.24 E-value=0.54 Score=43.18 Aligned_cols=35 Identities=23% Similarity=0.239 Sum_probs=31.4
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCC-cEEEEeeCCc
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKI-NVTMVFPEAH 75 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~-~Vtlv~~~~~ 75 (358)
..+|.|||+|.+|.-+|..|++.|. +|+++++.+.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~ 39 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEG 39 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCch
Confidence 4689999999999999999999998 9999987653
No 483
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=87.18 E-value=0.5 Score=44.33 Aligned_cols=33 Identities=21% Similarity=0.183 Sum_probs=30.4
Q ss_pred CCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeC
Q 018320 41 GGNAVVIGGGYIGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 41 ~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
..+|.|||+|..|.-+|..|++.|.+|+++.|.
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSC
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 468999999999999999999999999998774
No 484
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=87.15 E-value=3.2 Score=38.26 Aligned_cols=78 Identities=14% Similarity=0.085 Sum_probs=59.6
Q ss_pred CeEEecCHHHHHHHHHHHhcCCCCcEEEEcCc--HHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHHHHHHHHHHHhC
Q 018320 19 NVCYLRDLADANRLVNVMKSCSGGNAVVIGGG--YIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSK 96 (358)
Q Consensus 19 ~v~~l~~~~da~~i~~~l~~~~~~~vvVIGgG--~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~ 96 (358)
+-+..-.+.|...+++.+...++.++++||-| .++-.++..+++.|.+|+++.+... . .++++.+.+++..++.
T Consensus 145 ~~HPtQaLaDl~Ti~e~~g~l~gl~va~vGD~~~rva~Sl~~~~~~~G~~v~~~~P~~~-~---p~~~~~~~~~~~a~~~ 220 (325)
T 1vlv_A 145 EFHPTQALADLMTIEENFGRLKGVKVVFMGDTRNNVATSLMIACAKMGMNFVACGPEEL-K---PRSDVFKRCQEIVKET 220 (325)
T ss_dssp SCCHHHHHHHHHHHHHHHSCSTTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGG-C---CCHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHhCCcCCcEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccc-c---CCHHHHHHHHHHHHHc
Confidence 44555567889999998877788999999985 8999999999999999999987543 2 2455666666666677
Q ss_pred CCEE
Q 018320 97 GVKF 100 (358)
Q Consensus 97 gV~v 100 (358)
|.++
T Consensus 221 G~~v 224 (325)
T 1vlv_A 221 DGSV 224 (325)
T ss_dssp CCEE
T ss_pred CCeE
Confidence 7544
No 485
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=87.14 E-value=0.63 Score=43.31 Aligned_cols=34 Identities=18% Similarity=0.352 Sum_probs=30.7
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCC-cEEEEeeC
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKI-NVTMVFPE 73 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~-~Vtlv~~~ 73 (358)
+.++|+|||+|-+|.++|..|++.|. ++++++..
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D 67 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 67 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCC
Confidence 46899999999999999999999997 68898775
No 486
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=87.10 E-value=0.76 Score=42.21 Aligned_cols=36 Identities=19% Similarity=0.185 Sum_probs=32.6
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCc
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKINVTMVFPEAH 75 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~ 75 (358)
.++++.|||.|.+|-.+|..|...|.+|+.+.+.+.
T Consensus 143 ~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~ 178 (311)
T 2cuk_A 143 QGLTLGLVGMGRIGQAVAKRALAFGMRVVYHARTPK 178 (311)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCCEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 578999999999999999999999999999887653
No 487
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=87.10 E-value=1.4 Score=40.09 Aligned_cols=33 Identities=18% Similarity=0.188 Sum_probs=28.0
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
++|-+||-|..|.-+|..|.+.|++|++..|.+
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~ 38 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTA 38 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC----
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 689999999999999999999999999988754
No 488
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=87.09 E-value=0.4 Score=48.69 Aligned_cols=56 Identities=16% Similarity=0.147 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHhC-CC-EEEcCCeeeEEEEcCC--CcEEEEEc---CCCc--EEecCeEEEeeCC
Q 018320 84 KIASYYEEYYKSK-GV-KFVKGTVLSSFDVDSN--GKVVAVNL---RDGN--RLPTDMVVVGIGI 139 (358)
Q Consensus 84 ~~~~~~~~~l~~~-gV-~v~~~~~v~~i~~~~~--g~v~~v~~---~~g~--~i~~D~vi~a~G~ 139 (358)
.+...+.+.+++. || +++.++.++++..+++ +++..+.. .+|+ .+.++.||+|+|.
T Consensus 152 ~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG 216 (643)
T 1jnr_A 152 SYKPIIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGG 216 (643)
T ss_dssp THHHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCc
Confidence 3455666677776 99 9999999999986433 27666543 5665 5899999999983
No 489
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=87.07 E-value=1.6 Score=38.68 Aligned_cols=51 Identities=14% Similarity=0.096 Sum_probs=37.3
Q ss_pred CCCcEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHHHHHHHHHHHhCCCE
Q 018320 40 SGGNAVVIGG-GYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVK 99 (358)
Q Consensus 40 ~~~~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~ 99 (358)
.+|.++|.|| |.+|.++|..|++.|.+|.++.|.+ +-.+.+.+.+++.+.+
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~---------~~~~~~~~~l~~~~~~ 54 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQ---------ARIEAIATEIRDAGGT 54 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSH---------HHHHHHHHHHHHTTCE
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCH---------HHHHHHHHHHHhcCCc
Confidence 4678888885 7899999999999999999987642 2234445556665543
No 490
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=87.06 E-value=0.54 Score=42.95 Aligned_cols=76 Identities=24% Similarity=0.286 Sum_probs=48.8
Q ss_pred CcEEEEcCcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHHHHHHHHHHHhCCCEEEcCCeeeEEEEcCCCcEEEEE
Q 018320 42 GNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVKFVKGTVLSSFDVDSNGKVVAVN 121 (358)
Q Consensus 42 ~~vvVIGgG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~~~~v~~i~~~~~g~v~~v~ 121 (358)
.+++|||+|.+|.-+|..|+ .|.+|+++.|.+. - .+.+++.|+.+..... .... .+.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~---------~----~~~l~~~G~~~~~~~~-~~~~--------~~~ 59 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQE---------Q----AAAIQSEGIRLYKGGE-EFRA--------DCS 59 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHH---------H----HHHHHHHCEEEEETTE-EEEE--------CCE
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCHH---------H----HHHHHhCCceEecCCC-eecc--------ccc
Confidence 47999999999999999999 9999999987531 1 2334556877653221 1110 011
Q ss_pred cCCCcEEecCeEEEeeCCC
Q 018320 122 LRDGNRLPTDMVVVGIGIR 140 (358)
Q Consensus 122 ~~~g~~i~~D~vi~a~G~~ 140 (358)
......-++|.||+|+-..
T Consensus 60 ~~~~~~~~~D~vilavK~~ 78 (307)
T 3ego_A 60 ADTSINSDFDLLVVTVKQH 78 (307)
T ss_dssp EESSCCSCCSEEEECCCGG
T ss_pred ccccccCCCCEEEEEeCHH
Confidence 1111123589999997643
No 491
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=87.06 E-value=0.77 Score=39.96 Aligned_cols=36 Identities=17% Similarity=0.271 Sum_probs=31.5
Q ss_pred CCCcEEEEc-CcHHHHHHHHHHHhCCCcEEEEeeCCc
Q 018320 40 SGGNAVVIG-GGYIGMECAASLVINKINVTMVFPEAH 75 (358)
Q Consensus 40 ~~~~vvVIG-gG~~gle~A~~L~~~g~~Vtlv~~~~~ 75 (358)
++|+++|.| +|.+|.++|..|.+.|.+|+++.|.+.
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~ 42 (241)
T 1dhr_A 6 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVEN 42 (241)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChh
Confidence 578899998 478999999999999999999988653
No 492
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=87.04 E-value=0.71 Score=42.51 Aligned_cols=35 Identities=20% Similarity=0.143 Sum_probs=31.9
Q ss_pred CCCcEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeCC
Q 018320 40 SGGNAVVIGG-GYIGMECAASLVINKINVTMVFPEA 74 (358)
Q Consensus 40 ~~~~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~~ 74 (358)
..++++|.|+ |++|..++..|.+.|.+|+++.|.+
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 61 (352)
T 1sb8_A 26 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFA 61 (352)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4689999997 9999999999999999999998864
No 493
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=87.00 E-value=0.67 Score=43.19 Aligned_cols=34 Identities=18% Similarity=0.089 Sum_probs=30.9
Q ss_pred CcEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeCCc
Q 018320 42 GNAVVIGG-GYIGMECAASLVINKINVTMVFPEAH 75 (358)
Q Consensus 42 ~~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~~~ 75 (358)
++|+|.|| |++|..++..|.+.|.+|+++.|.+.
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~ 63 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSS 63 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCS
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCc
Confidence 68999997 99999999999999999999988654
No 494
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=86.99 E-value=1.6 Score=38.12 Aligned_cols=52 Identities=29% Similarity=0.279 Sum_probs=37.5
Q ss_pred CCCcEEEEc-CcHHHHHHHHHHHhCCCcEEEEeeCCcccCccCCHHHHHHHHHHHHhCCCE
Q 018320 40 SGGNAVVIG-GGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASYYEEYYKSKGVK 99 (358)
Q Consensus 40 ~~~~vvVIG-gG~~gle~A~~L~~~g~~Vtlv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~ 99 (358)
.+|+++|.| +|.+|.++|..|++.|.+|.++.+.+ ++-.+.+.+.+++.+.+
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~--------~~~~~~~~~~~~~~~~~ 55 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGS--------KEKAEAVVEEIKAKGVD 55 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC--------HHHHHHHHHHHHHTTSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCC--------HHHHHHHHHHHHhcCCc
Confidence 367788887 47899999999999999999876642 23334445556665543
No 495
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=86.95 E-value=0.56 Score=40.01 Aligned_cols=35 Identities=14% Similarity=0.216 Sum_probs=31.1
Q ss_pred cEEEEc-CcHHHHHHHHHHHhCCCcEEEEeeCCccc
Q 018320 43 NAVVIG-GGYIGMECAASLVINKINVTMVFPEAHCM 77 (358)
Q Consensus 43 ~vvVIG-gG~~gle~A~~L~~~g~~Vtlv~~~~~~l 77 (358)
+++|.| +|++|..++..|.+.|.+|+++.|.+.-.
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~ 37 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQV 37 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGS
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccch
Confidence 689998 79999999999999999999999876543
No 496
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=86.87 E-value=2.1 Score=37.30 Aligned_cols=34 Identities=24% Similarity=0.300 Sum_probs=29.9
Q ss_pred CCCcEEEEc-CcHHHHHHHHHHHhCCCcEEEEeeC
Q 018320 40 SGGNAVVIG-GGYIGMECAASLVINKINVTMVFPE 73 (358)
Q Consensus 40 ~~~~vvVIG-gG~~gle~A~~L~~~g~~Vtlv~~~ 73 (358)
.+|.++|.| +|.+|.++|..|++.|.+|.++.|.
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~ 40 (247)
T 2jah_A 6 QGKVALITGASSGIGEATARALAAEGAAVAIAARR 40 (247)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 468899988 5789999999999999999998764
No 497
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=86.86 E-value=0.7 Score=41.00 Aligned_cols=34 Identities=18% Similarity=0.247 Sum_probs=30.3
Q ss_pred CCCcEEEEcCcHHHHHHHHHHHhCCC-cEEEEeeC
Q 018320 40 SGGNAVVIGGGYIGMECAASLVINKI-NVTMVFPE 73 (358)
Q Consensus 40 ~~~~vvVIGgG~~gle~A~~L~~~g~-~Vtlv~~~ 73 (358)
..++|+|||.|-+|.++|..|++.|. ++++++..
T Consensus 27 ~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d 61 (251)
T 1zud_1 27 LDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD 61 (251)
T ss_dssp HTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred hcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 36899999999999999999999998 68888764
No 498
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=86.84 E-value=1.1 Score=39.80 Aligned_cols=39 Identities=23% Similarity=0.244 Sum_probs=33.0
Q ss_pred CCCcEEEEc-CcHHHHHHHHHHHhCCCcEEEEeeCCcccC
Q 018320 40 SGGNAVVIG-GGYIGMECAASLVINKINVTMVFPEAHCMA 78 (358)
Q Consensus 40 ~~~~vvVIG-gG~~gle~A~~L~~~g~~Vtlv~~~~~~l~ 78 (358)
++|.++|.| +|.+|.++|..|++.|.+|.++.|...-..
T Consensus 5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~ 44 (274)
T 3e03_A 5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANP 44 (274)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCT
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhh
Confidence 578899998 478999999999999999999988765433
No 499
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=86.83 E-value=2 Score=37.90 Aligned_cols=36 Identities=14% Similarity=0.059 Sum_probs=31.5
Q ss_pred CCCcEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeCCc
Q 018320 40 SGGNAVVIGG-GYIGMECAASLVINKINVTMVFPEAH 75 (358)
Q Consensus 40 ~~~~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~~~ 75 (358)
.+|.++|.|| |.+|.++|..|++.|.+|.++.|...
T Consensus 27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~ 63 (260)
T 3un1_A 27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIK 63 (260)
T ss_dssp TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 5788888884 78999999999999999999988754
No 500
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=86.83 E-value=0.76 Score=42.33 Aligned_cols=36 Identities=22% Similarity=0.104 Sum_probs=32.1
Q ss_pred CCCcEEEEcC-cHHHHHHHHHHHhCCCcEEEEeeCCc
Q 018320 40 SGGNAVVIGG-GYIGMECAASLVINKINVTMVFPEAH 75 (358)
Q Consensus 40 ~~~~vvVIGg-G~~gle~A~~L~~~g~~Vtlv~~~~~ 75 (358)
.+++++|.|| |++|..++..|.+.|.+|+++.|.+.
T Consensus 8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 44 (357)
T 1rkx_A 8 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAP 44 (357)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCS
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCc
Confidence 4689999995 99999999999999999999988654
Done!