Query 018322
Match_columns 358
No_of_seqs 511 out of 3287
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 13:26:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018322.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018322hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xyi_A Probable histone-bindin 100.0 2.2E-42 7.5E-47 330.6 26.5 283 32-356 23-313 (430)
2 4gqb_B Methylosome protein 50; 100.0 9.1E-31 3.1E-35 243.1 29.9 210 66-354 82-291 (344)
3 4gqb_B Methylosome protein 50; 100.0 4.7E-30 1.6E-34 238.3 28.6 204 67-354 128-333 (344)
4 2ynn_A Coatomer subunit beta'; 100.0 8.1E-29 2.8E-33 225.6 28.9 205 66-354 55-261 (304)
5 2ynn_A Coatomer subunit beta'; 100.0 9.7E-29 3.3E-33 225.0 27.8 203 68-354 15-219 (304)
6 3ow8_A WD repeat-containing pr 100.0 8.4E-29 2.9E-33 227.5 27.3 164 158-351 157-320 (321)
7 4g56_B MGC81050 protein; prote 100.0 1.1E-28 3.9E-33 230.0 26.1 172 158-354 132-303 (357)
8 4g56_B MGC81050 protein; prote 100.0 2.3E-28 7.9E-33 227.9 26.0 205 66-354 139-345 (357)
9 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.2E-28 7.6E-33 226.7 25.0 206 68-352 18-225 (345)
10 1got_B GT-beta; complex (GTP-b 100.0 9.2E-28 3.1E-32 222.0 28.4 166 156-349 175-340 (340)
11 2xzm_R RACK1; ribosome, transl 100.0 1.3E-27 4.4E-32 221.2 29.3 171 156-354 67-246 (343)
12 1vyh_C Platelet-activating fac 100.0 2.8E-28 9.5E-33 231.5 25.4 202 67-354 109-329 (410)
13 2hes_X YDR267CP; beta-propelle 100.0 5.4E-28 1.9E-32 222.7 26.5 173 164-353 57-231 (330)
14 2pm7_B Protein transport prote 100.0 1E-27 3.5E-32 217.6 27.8 209 68-353 11-239 (297)
15 3ow8_A WD repeat-containing pr 100.0 1E-27 3.5E-32 220.2 27.1 168 157-354 114-281 (321)
16 3frx_A Guanine nucleotide-bind 100.0 2.1E-27 7.2E-32 217.8 27.9 207 67-354 18-229 (319)
17 1vyh_C Platelet-activating fac 100.0 1.1E-27 3.7E-32 227.5 26.6 164 158-351 227-410 (410)
18 4ery_A WD repeat-containing pr 100.0 4.1E-27 1.4E-31 214.4 28.2 201 67-354 24-225 (312)
19 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.4E-27 4.9E-32 221.3 24.9 213 66-356 61-339 (345)
20 1got_B GT-beta; complex (GTP-b 100.0 4.2E-27 1.4E-31 217.6 27.7 204 67-354 56-259 (340)
21 3iz6_a 40S ribosomal protein R 100.0 1.5E-27 5.1E-32 224.1 22.3 216 66-354 66-282 (380)
22 2pbi_B Guanine nucleotide-bind 100.0 1.6E-26 5.4E-31 215.2 28.2 209 66-354 64-273 (354)
23 3f3f_A Nucleoporin SEH1; struc 100.0 1.3E-26 4.3E-31 211.8 26.5 220 67-354 12-339 (351)
24 2pbi_B Guanine nucleotide-bind 100.0 1.5E-26 5.2E-31 215.3 27.4 166 157-349 188-354 (354)
25 4e54_B DNA damage-binding prot 100.0 2.3E-27 7.8E-32 226.7 21.6 170 157-355 156-330 (435)
26 4ery_A WD repeat-containing pr 100.0 2.2E-26 7.5E-31 209.5 26.5 171 154-354 12-182 (312)
27 3iz6_a 40S ribosomal protein R 100.0 7.5E-27 2.6E-31 219.3 24.0 170 162-355 202-378 (380)
28 2xyi_A Probable histone-bindin 100.0 3.6E-26 1.2E-30 218.1 28.6 180 159-353 175-354 (430)
29 3bg1_A Protein SEC13 homolog; 100.0 6E-27 2E-31 214.5 22.0 210 67-352 14-247 (316)
30 2pm7_B Protein transport prote 100.0 1.6E-26 5.4E-31 209.7 23.9 172 159-354 3-191 (297)
31 3dm0_A Maltose-binding peripla 100.0 3.5E-26 1.2E-30 231.1 28.6 173 156-354 421-594 (694)
32 2j04_B YDR362CP, TAU91; beta p 100.0 1.3E-26 4.4E-31 226.5 24.1 239 61-355 128-389 (524)
33 3frx_A Guanine nucleotide-bind 100.0 1.5E-26 5.2E-31 212.1 22.7 177 154-354 6-187 (319)
34 2hes_X YDR267CP; beta-propelle 99.9 2.1E-26 7.1E-31 212.1 23.5 214 66-353 58-281 (330)
35 3dwl_C Actin-related protein 2 99.9 2.6E-27 9E-32 220.9 16.8 210 67-355 12-239 (377)
36 4h5i_A Guanine nucleotide-exch 99.9 8.4E-27 2.9E-31 218.0 20.1 167 162-353 173-344 (365)
37 3jrp_A Fusion protein of prote 99.9 8.5E-26 2.9E-30 209.7 26.7 209 66-354 11-242 (379)
38 1erj_A Transcriptional repress 99.9 1.7E-25 6E-30 210.9 28.0 173 156-354 156-343 (393)
39 1erj_A Transcriptional repress 99.9 1.6E-25 5.3E-30 211.2 26.1 161 163-354 121-289 (393)
40 3vl1_A 26S proteasome regulato 99.9 2E-25 6.7E-30 211.0 26.2 174 157-356 131-326 (420)
41 2ymu_A WD-40 repeat protein; u 99.9 1.2E-25 4.2E-30 221.3 25.3 159 158-349 419-577 (577)
42 1k8k_C P40, ARP2/3 complex 41 99.9 2.7E-25 9.1E-30 206.2 25.7 211 66-354 8-235 (372)
43 1nr0_A Actin interacting prote 99.9 1.8E-25 6.2E-30 222.8 25.7 167 159-354 53-223 (611)
44 1nr0_A Actin interacting prote 99.9 2.7E-25 9.4E-30 221.5 25.6 201 68-354 61-272 (611)
45 4e54_B DNA damage-binding prot 99.9 3.5E-26 1.2E-30 218.5 18.3 172 160-355 114-285 (435)
46 2aq5_A Coronin-1A; WD40 repeat 99.9 1.6E-25 5.4E-30 211.3 22.6 175 161-356 77-258 (402)
47 3bg1_A Protein SEC13 homolog; 99.9 8E-26 2.7E-30 207.0 19.8 172 159-351 97-292 (316)
48 3ei3_B DNA damage-binding prot 99.9 7E-25 2.4E-29 205.2 26.6 205 67-355 74-285 (383)
49 3jrp_A Fusion protein of prote 99.9 6.6E-25 2.3E-29 203.6 24.7 211 66-352 55-287 (379)
50 4ggc_A P55CDC, cell division c 99.9 1.5E-24 5.2E-29 196.7 26.2 194 156-354 58-317 (318)
51 2pm9_A Protein WEB1, protein t 99.9 2.6E-25 8.8E-30 209.6 21.8 170 161-356 161-341 (416)
52 2j04_B YDR362CP, TAU91; beta p 99.9 1.8E-25 6.1E-30 218.5 20.4 164 160-352 261-428 (524)
53 4a11_B DNA excision repair pro 99.9 9.1E-24 3.1E-28 197.9 30.5 211 65-355 98-368 (408)
54 3dw8_B Serine/threonine-protei 99.9 1.4E-24 4.7E-29 206.7 25.0 239 66-354 28-317 (447)
55 3f3f_A Nucleoporin SEH1; struc 99.9 4E-25 1.4E-29 201.8 20.4 176 159-354 5-251 (351)
56 2pm9_A Protein WEB1, protein t 99.9 3.6E-25 1.2E-29 208.6 20.7 225 60-354 61-296 (416)
57 2xzm_R RACK1; ribosome, transl 99.9 5.1E-24 1.8E-28 197.0 28.0 202 67-354 77-287 (343)
58 1gxr_A ESG1, transducin-like e 99.9 6.8E-24 2.3E-28 193.6 28.4 203 66-355 97-299 (337)
59 4aez_A CDC20, WD repeat-contai 99.9 3.8E-24 1.3E-28 202.0 27.4 166 159-354 128-295 (401)
60 3vl1_A 26S proteasome regulato 99.9 6.6E-25 2.3E-29 207.4 22.2 219 65-355 138-368 (420)
61 3zwl_B Eukaryotic translation 99.9 5.3E-24 1.8E-28 196.6 27.4 206 66-354 32-251 (369)
62 2aq5_A Coronin-1A; WD40 repeat 99.9 1.4E-24 4.9E-29 204.8 23.7 211 66-354 81-301 (402)
63 3dw8_B Serine/threonine-protei 99.9 7.9E-25 2.7E-29 208.4 22.0 175 162-354 174-375 (447)
64 1sq9_A Antiviral protein SKI8; 99.9 4.9E-24 1.7E-28 199.7 27.0 163 162-354 183-397 (397)
65 2ymu_A WD-40 repeat protein; u 99.9 3.3E-24 1.1E-28 211.0 26.5 161 158-351 378-538 (577)
66 2vdu_B TRNA (guanine-N(7)-)-me 99.9 6.1E-24 2.1E-28 203.7 27.3 169 162-354 99-273 (450)
67 3k26_A Polycomb protein EED; W 99.9 1.7E-24 5.7E-29 200.0 22.2 210 66-354 69-320 (366)
68 4a11_B DNA excision repair pro 99.9 8E-24 2.7E-28 198.3 26.5 166 163-355 97-279 (408)
69 3jro_A Fusion protein of prote 99.9 2.6E-24 8.9E-29 219.5 24.6 208 67-354 10-240 (753)
70 4gga_A P55CDC, cell division c 99.9 2.3E-23 7.9E-28 197.9 29.3 173 156-354 180-397 (420)
71 4aow_A Guanine nucleotide-bind 99.9 3.9E-24 1.3E-28 195.8 22.8 168 157-355 163-340 (340)
72 3dwl_C Actin-related protein 2 99.9 1.3E-24 4.4E-29 202.6 19.5 208 66-351 55-280 (377)
73 4aow_A Guanine nucleotide-bind 99.9 3.1E-23 1.1E-27 189.8 28.1 210 66-354 38-248 (340)
74 3ei3_B DNA damage-binding prot 99.9 5E-24 1.7E-28 199.4 23.1 174 154-354 62-238 (383)
75 3i2n_A WD repeat-containing pr 99.9 1.5E-23 5.2E-28 193.0 25.4 210 65-354 17-245 (357)
76 1k8k_C P40, ARP2/3 complex 41 99.9 1.5E-23 5.2E-28 194.3 25.5 209 66-352 52-274 (372)
77 3dm0_A Maltose-binding peripla 99.9 5.9E-24 2E-28 214.8 24.5 175 156-354 373-552 (694)
78 1gxr_A ESG1, transducin-like e 99.9 4.9E-23 1.7E-27 187.9 28.1 210 63-354 48-257 (337)
79 4aez_A CDC20, WD repeat-contai 99.9 1.5E-23 5.3E-28 197.8 25.4 165 158-353 169-337 (401)
80 3k26_A Polycomb protein EED; W 99.9 8.9E-24 3E-28 195.1 22.7 165 163-355 67-263 (366)
81 4h5i_A Guanine nucleotide-exch 99.9 8.6E-24 2.9E-28 197.5 22.3 163 164-354 132-302 (365)
82 2oaj_A Protein SNI1; WD40 repe 99.9 1.2E-23 4E-28 218.4 25.2 203 66-354 17-244 (902)
83 1r5m_A SIR4-interacting protei 99.9 5.3E-23 1.8E-27 193.5 27.2 163 164-354 107-321 (425)
84 1r5m_A SIR4-interacting protei 99.9 1.3E-23 4.6E-28 197.6 22.9 162 160-351 242-424 (425)
85 3mkq_A Coatomer beta'-subunit; 99.9 1.6E-23 5.6E-28 214.3 24.9 201 68-354 15-219 (814)
86 3lrv_A PRE-mRNA-splicing facto 99.9 1.7E-23 5.9E-28 193.3 22.6 167 165-355 76-247 (343)
87 3mmy_A MRNA export factor; mRN 99.9 3E-23 1E-27 191.5 23.9 208 66-352 39-346 (368)
88 1yfq_A Cell cycle arrest prote 99.9 6.7E-23 2.3E-27 187.9 25.7 207 67-354 12-284 (342)
89 3zwl_B Eukaryotic translation 99.9 9.1E-23 3.1E-27 188.3 26.0 225 58-353 107-347 (369)
90 3lrv_A PRE-mRNA-splicing facto 99.9 6.1E-23 2.1E-27 189.6 24.3 168 157-354 117-294 (343)
91 3v7d_B Cell division control p 99.9 6.5E-23 2.2E-27 196.7 25.2 170 156-354 153-343 (464)
92 1sq9_A Antiviral protein SKI8; 99.9 5.2E-23 1.8E-27 192.7 23.3 220 66-354 62-324 (397)
93 3jro_A Fusion protein of prote 99.9 2.8E-23 9.5E-28 211.9 22.9 212 66-353 53-286 (753)
94 3mkq_A Coatomer beta'-subunit; 99.9 8.9E-23 3E-27 208.8 25.7 204 65-354 54-261 (814)
95 3mmy_A MRNA export factor; mRN 99.9 2.7E-23 9.3E-28 191.7 19.7 124 159-309 33-161 (368)
96 3i2n_A WD repeat-containing pr 99.9 4.7E-23 1.6E-27 189.8 21.1 174 154-354 7-201 (357)
97 2w18_A PALB2, fancn, partner a 99.9 8.4E-23 2.9E-27 186.1 22.1 167 157-351 170-356 (356)
98 3gre_A Serine/threonine-protei 99.9 2.7E-23 9.1E-28 197.8 18.6 215 67-354 64-294 (437)
99 4gga_A P55CDC, cell division c 99.9 5.7E-22 2E-26 188.3 27.6 169 157-354 139-312 (420)
100 1pgu_A Actin interacting prote 99.9 1.6E-22 5.5E-27 199.8 23.7 174 158-354 56-240 (615)
101 3vu4_A KMHSV2; beta-propeller 99.9 6.9E-22 2.4E-26 183.8 26.5 163 167-354 60-273 (355)
102 3v7d_B Cell division control p 99.9 7.3E-22 2.5E-26 189.3 27.3 187 156-355 194-384 (464)
103 3odt_A Protein DOA1; ubiquitin 99.9 2E-21 6.8E-26 175.5 27.0 196 67-354 19-216 (313)
104 2vdu_B TRNA (guanine-N(7)-)-me 99.9 1.2E-21 4.2E-26 187.6 26.5 168 156-350 140-337 (450)
105 3sfz_A APAF-1, apoptotic pepti 99.9 2.9E-22 9.8E-27 214.5 23.9 167 159-354 609-776 (1249)
106 3gre_A Serine/threonine-protei 99.9 1.5E-22 5.3E-27 192.5 19.2 160 164-349 213-437 (437)
107 1p22_A F-BOX/WD-repeat protein 99.9 2.1E-21 7.2E-26 185.1 26.4 163 157-354 165-327 (435)
108 4gq1_A NUP37; propeller, trans 99.9 7E-23 2.4E-27 193.2 15.9 154 179-354 102-288 (393)
109 3sfz_A APAF-1, apoptotic pepti 99.9 1.1E-21 3.9E-26 209.8 27.0 170 157-354 649-873 (1249)
110 1pgu_A Actin interacting prote 99.9 2.6E-21 8.9E-26 191.2 26.3 205 69-354 67-285 (615)
111 4gq1_A NUP37; propeller, trans 99.9 2.8E-21 9.7E-26 182.1 23.6 231 66-353 136-390 (393)
112 1p22_A F-BOX/WD-repeat protein 99.9 5.5E-21 1.9E-25 182.2 24.4 163 157-354 205-367 (435)
113 3odt_A Protein DOA1; ubiquitin 99.9 6.5E-21 2.2E-25 172.1 23.2 167 154-352 7-174 (313)
114 2ovr_B FBW7, F-BOX/WD repeat p 99.9 1.2E-20 4.1E-25 180.2 24.8 160 157-354 151-310 (445)
115 2oaj_A Protein SNI1; WD40 repe 99.9 5.4E-21 1.8E-25 198.4 21.8 164 158-354 10-184 (902)
116 2ovr_B FBW7, F-BOX/WD repeat p 99.9 1.2E-19 4.2E-24 173.2 28.2 161 156-354 190-350 (445)
117 1yfq_A Cell cycle arrest prote 99.9 2.4E-21 8.2E-26 177.5 15.5 163 162-355 8-183 (342)
118 2j04_A TAU60, YPL007P, hypothe 99.9 1.4E-20 4.7E-25 181.9 21.2 159 167-351 131-296 (588)
119 3vu4_A KMHSV2; beta-propeller 99.9 3.6E-20 1.2E-24 172.2 22.9 125 222-353 188-337 (355)
120 2j04_A TAU60, YPL007P, hypothe 99.9 1E-20 3.6E-25 182.7 19.2 159 163-354 83-256 (588)
121 4ggc_A P55CDC, cell division c 99.9 5.3E-20 1.8E-24 166.6 22.7 155 168-355 28-184 (318)
122 2oit_A Nucleoporin 214KDA; NH2 99.8 5.3E-20 1.8E-24 175.9 16.5 172 161-354 88-280 (434)
123 2oit_A Nucleoporin 214KDA; NH2 99.8 4.3E-20 1.5E-24 176.5 13.6 176 165-351 36-222 (434)
124 1l0q_A Surface layer protein; 99.8 1.8E-18 6E-23 161.8 23.4 161 164-354 30-191 (391)
125 1l0q_A Surface layer protein; 99.8 5.4E-18 1.8E-22 158.4 24.9 161 163-354 71-235 (391)
126 3bws_A Protein LP49; two-domai 99.8 2.1E-18 7.2E-23 163.5 19.8 162 162-354 166-336 (433)
127 3bws_A Protein LP49; two-domai 99.8 1.3E-17 4.6E-22 157.9 23.0 165 159-354 205-392 (433)
128 2w18_A PALB2, fancn, partner a 99.8 1.8E-18 6.2E-23 157.6 15.9 160 164-354 110-316 (356)
129 2hqs_A Protein TOLB; TOLB, PAL 99.8 2E-16 6.9E-21 150.1 25.6 161 160-353 217-388 (415)
130 2hqs_A Protein TOLB; TOLB, PAL 99.8 2.9E-16 9.9E-21 149.0 25.5 162 160-354 173-346 (415)
131 2ojh_A Uncharacterized protein 99.7 7.1E-16 2.4E-20 137.2 19.5 163 165-355 84-261 (297)
132 2ojh_A Uncharacterized protein 99.7 1.9E-15 6.4E-20 134.4 20.0 164 160-351 36-203 (297)
133 1ri6_A Putative isomerase YBHE 99.6 4.6E-14 1.6E-18 128.6 22.2 171 159-352 31-209 (343)
134 1nir_A Nitrite reductase; hemo 99.6 3.7E-14 1.3E-18 139.1 22.9 159 168-354 181-357 (543)
135 1ri6_A Putative isomerase YBHE 99.6 3.1E-14 1.1E-18 129.7 20.6 168 163-351 81-261 (343)
136 3vgz_A Uncharacterized protein 99.6 5.4E-14 1.8E-18 128.9 22.2 162 168-354 143-305 (353)
137 3u4y_A Uncharacterized protein 99.6 1.5E-13 5.1E-18 125.2 24.6 165 163-355 38-210 (331)
138 3u4y_A Uncharacterized protein 99.6 1.1E-13 3.7E-18 126.0 20.9 172 159-355 77-255 (331)
139 2ecf_A Dipeptidyl peptidase IV 99.6 6.7E-14 2.3E-18 141.8 18.9 159 166-354 109-323 (741)
140 3hfq_A Uncharacterized protein 99.6 2.3E-13 8E-18 125.0 20.6 201 89-352 2-218 (347)
141 3vgz_A Uncharacterized protein 99.6 5.8E-13 2E-17 122.0 22.8 163 164-354 87-264 (353)
142 1xfd_A DIP, dipeptidyl aminope 99.5 6.8E-14 2.3E-18 141.3 16.3 159 167-354 62-291 (723)
143 1nir_A Nitrite reductase; hemo 99.5 9E-13 3.1E-17 129.2 23.8 164 162-352 218-402 (543)
144 2ecf_A Dipeptidyl peptidase IV 99.5 1.2E-13 4.2E-18 139.9 17.9 147 165-343 36-230 (741)
145 1pby_B Quinohemoprotein amine 99.5 1.7E-12 5.8E-17 117.8 23.5 156 167-354 83-312 (337)
146 3hfq_A Uncharacterized protein 99.5 2E-12 6.8E-17 118.7 24.1 163 166-350 141-315 (347)
147 1k32_A Tricorn protease; prote 99.5 4.6E-13 1.6E-17 141.2 20.5 159 161-352 332-502 (1045)
148 1xfd_A DIP, dipeptidyl aminope 99.5 8.4E-13 2.9E-17 133.3 20.1 161 163-349 111-341 (723)
149 3scy_A Hypothetical bacterial 99.5 9.8E-12 3.3E-16 114.8 25.2 203 89-353 13-243 (361)
150 2z3z_A Dipeptidyl aminopeptida 99.5 6.8E-13 2.3E-17 133.7 18.7 177 160-351 115-341 (706)
151 1pby_B Quinohemoprotein amine 99.5 2.2E-12 7.4E-17 117.1 19.7 113 167-309 35-164 (337)
152 1z68_A Fibroblast activation p 99.5 3.5E-13 1.2E-17 136.2 14.3 156 167-353 61-292 (719)
153 1k32_A Tricorn protease; prote 99.5 7.9E-13 2.7E-17 139.3 16.4 157 164-354 294-463 (1045)
154 2z3z_A Dipeptidyl aminopeptida 99.5 1.2E-12 4E-17 132.0 16.9 162 166-354 181-393 (706)
155 3o4h_A Acylamino-acid-releasin 99.5 3.8E-12 1.3E-16 125.5 20.0 202 64-355 19-230 (582)
156 3scy_A Hypothetical bacterial 99.4 1.2E-11 4.1E-16 114.2 21.2 168 166-350 155-335 (361)
157 1jmx_B Amine dehydrogenase; ox 99.4 9.7E-12 3.3E-16 113.5 20.2 115 167-309 44-176 (349)
158 1jmx_B Amine dehydrogenase; ox 99.4 1.5E-11 5.1E-16 112.2 20.8 158 167-354 93-327 (349)
159 3o4h_A Acylamino-acid-releasin 99.4 7.8E-13 2.7E-17 130.4 12.6 150 167-350 111-274 (582)
160 1z68_A Fibroblast activation p 99.4 1.2E-12 4E-17 132.4 11.4 141 170-342 20-189 (719)
161 4a5s_A Dipeptidyl peptidase 4 99.4 3.5E-11 1.2E-15 122.2 20.9 156 169-354 65-296 (740)
162 1jof_A Carboxy-CIS,CIS-muconat 99.4 3.2E-11 1.1E-15 111.9 18.2 163 163-351 37-223 (365)
163 1jof_A Carboxy-CIS,CIS-muconat 99.3 3.1E-10 1E-14 105.2 22.3 167 164-352 143-341 (365)
164 4a5s_A Dipeptidyl peptidase 4 99.3 2.2E-11 7.4E-16 123.8 14.9 143 166-341 17-190 (740)
165 1q7f_A NHL, brain tumor CG1071 99.3 8.3E-10 2.8E-14 98.3 21.3 156 164-353 119-281 (286)
166 3pe7_A Oligogalacturonate lyas 99.2 2.2E-10 7.6E-15 106.4 17.3 162 163-355 78-276 (388)
167 3azo_A Aminopeptidase; POP fam 99.2 2.9E-10 1E-14 113.5 17.2 157 170-353 81-275 (662)
168 3fvz_A Peptidyl-glycine alpha- 99.2 4.7E-09 1.6E-13 95.8 22.5 160 165-353 23-228 (329)
169 3azo_A Aminopeptidase; POP fam 99.2 2.1E-10 7.2E-15 114.6 14.5 166 164-352 128-325 (662)
170 1xip_A Nucleoporin NUP159; bet 99.2 7.6E-10 2.6E-14 103.2 16.6 136 162-339 85-231 (388)
171 2xdw_A Prolyl endopeptidase; a 99.2 3.8E-09 1.3E-13 106.7 23.0 224 47-354 109-370 (710)
172 1xip_A Nucleoporin NUP159; bet 99.2 4.2E-10 1.4E-14 104.9 14.3 155 167-354 39-193 (388)
173 2dg1_A DRP35, lactonase; beta 99.1 8.5E-09 2.9E-13 93.7 21.8 165 160-352 39-213 (333)
174 3pe7_A Oligogalacturonate lyas 99.1 1.7E-09 6E-14 100.2 17.0 164 159-353 24-226 (388)
175 3e5z_A Putative gluconolactona 99.1 2.6E-09 9E-14 95.6 17.0 159 163-351 25-201 (296)
176 2xdw_A Prolyl endopeptidase; a 99.1 1.5E-09 5.2E-14 109.6 17.0 165 164-354 123-322 (710)
177 2dg1_A DRP35, lactonase; beta 99.0 8.2E-08 2.8E-12 87.1 24.4 159 163-351 84-262 (333)
178 3e5z_A Putative gluconolactona 99.0 5.9E-08 2E-12 86.7 22.6 158 161-351 64-245 (296)
179 3c5m_A Oligogalacturonate lyas 99.0 6.5E-10 2.2E-14 103.2 9.8 153 170-354 85-275 (396)
180 2oiz_A Aromatic amine dehydrog 99.0 3.1E-08 1.1E-12 91.8 21.0 67 282-353 259-335 (361)
181 1q7f_A NHL, brain tumor CG1071 99.0 1.5E-08 5.2E-13 90.0 18.1 155 164-351 28-193 (286)
182 3fvz_A Peptidyl-glycine alpha- 99.0 6.8E-09 2.3E-13 94.8 15.9 160 164-352 141-322 (329)
183 2bkl_A Prolyl endopeptidase; m 99.0 4.5E-09 1.5E-13 105.9 15.9 162 163-354 118-306 (695)
184 2gop_A Trilobed protease; beta 99.0 8.8E-09 3E-13 94.0 14.4 143 168-352 106-291 (347)
185 2bkl_A Prolyl endopeptidase; m 99.0 2.7E-08 9.2E-13 100.2 19.0 219 47-351 105-348 (695)
186 3no2_A Uncharacterized protein 99.0 1.1E-07 3.6E-12 84.8 20.7 166 156-354 26-197 (276)
187 1rwi_B Serine/threonine-protei 98.9 5.9E-08 2E-12 85.2 17.3 159 166-354 108-266 (270)
188 1qks_A Cytochrome CD1 nitrite 98.9 3.7E-07 1.3E-11 89.6 24.3 169 164-354 195-375 (567)
189 1rwi_B Serine/threonine-protei 98.9 2.8E-07 9.4E-12 80.8 20.3 158 164-353 65-223 (270)
190 3c5m_A Oligogalacturonate lyas 98.8 1.2E-07 4E-12 87.8 16.5 159 163-356 185-388 (396)
191 2z2n_A Virginiamycin B lyase; 98.8 9.8E-07 3.4E-11 78.1 21.1 162 159-350 8-169 (299)
192 1yr2_A Prolyl oligopeptidase; 98.8 1.3E-07 4.4E-12 96.0 16.1 162 164-353 161-351 (741)
193 2z2n_A Virginiamycin B lyase; 98.7 2.1E-06 7.2E-11 76.0 21.4 157 164-350 55-211 (299)
194 1yr2_A Prolyl oligopeptidase; 98.7 5.5E-07 1.9E-11 91.3 19.4 218 47-351 147-392 (741)
195 3iuj_A Prolyl endopeptidase; h 98.7 1.9E-07 6.4E-12 94.1 15.5 165 164-354 127-316 (693)
196 2gop_A Trilobed protease; beta 98.7 1.4E-07 4.9E-12 85.9 13.4 145 166-349 59-250 (347)
197 3no2_A Uncharacterized protein 98.7 2.7E-07 9.2E-12 82.1 14.7 142 179-354 6-156 (276)
198 1qks_A Cytochrome CD1 nitrite 98.7 5.6E-06 1.9E-10 81.2 25.0 225 45-352 175-421 (567)
199 1pjx_A Dfpase, DIISOPROPYLFLUO 98.7 1.1E-06 3.8E-11 78.6 17.7 162 166-353 117-300 (314)
200 3hrp_A Uncharacterized protein 98.6 8.9E-06 3.1E-10 76.5 22.9 156 171-353 176-355 (409)
201 3dsm_A Uncharacterized protein 98.6 4.5E-06 1.5E-10 75.9 20.2 157 163-354 81-255 (328)
202 2qc5_A Streptogramin B lactona 98.6 1E-05 3.5E-10 71.5 20.8 158 163-350 17-174 (300)
203 2oiz_A Aromatic amine dehydrog 98.6 1.3E-06 4.5E-11 80.7 15.3 161 160-353 46-231 (361)
204 3iuj_A Prolyl endopeptidase; h 98.6 2.8E-06 9.5E-11 85.5 18.8 224 44-352 110-359 (693)
205 3g4e_A Regucalcin; six bladed 98.5 1E-05 3.5E-10 72.4 19.9 160 163-351 10-179 (297)
206 2ghs_A AGR_C_1268P; regucalcin 98.5 5.2E-06 1.8E-10 75.4 18.2 153 167-351 50-209 (326)
207 3dsm_A Uncharacterized protein 98.5 9E-06 3.1E-10 73.9 19.7 153 167-351 132-301 (328)
208 3dr2_A Exported gluconolactona 98.5 4.3E-06 1.5E-10 75.1 17.3 160 162-352 41-224 (305)
209 2qc5_A Streptogramin B lactona 98.5 1.7E-05 5.7E-10 70.1 20.7 157 164-350 60-216 (300)
210 1pjx_A Dfpase, DIISOPROPYLFLUO 98.5 6.6E-06 2.3E-10 73.5 18.2 158 163-351 15-206 (314)
211 3g4e_A Regucalcin; six bladed 98.5 8.5E-06 2.9E-10 72.9 17.8 152 166-341 98-262 (297)
212 2mad_H Methylamine dehydrogena 98.4 0.00012 4.1E-09 67.9 25.0 164 171-355 170-353 (373)
213 3hrp_A Uncharacterized protein 98.4 7.5E-06 2.6E-10 77.0 17.0 160 166-352 131-298 (409)
214 2ghs_A AGR_C_1268P; regucalcin 98.3 6.3E-05 2.2E-09 68.2 19.9 155 163-351 87-259 (326)
215 2hz6_A Endoplasmic reticulum t 98.3 1.4E-07 4.6E-12 87.7 0.3 140 179-355 10-152 (369)
216 2hz6_A Endoplasmic reticulum t 98.2 2.8E-07 9.6E-12 85.6 2.0 154 166-355 38-195 (369)
217 1npe_A Nidogen, entactin; glyc 98.1 0.00094 3.2E-08 58.3 21.6 160 166-352 36-198 (267)
218 2ece_A 462AA long hypothetical 98.1 0.00026 8.9E-09 66.5 18.1 157 168-352 140-352 (462)
219 2qe8_A Uncharacterized protein 98.0 7.6E-05 2.6E-09 68.1 14.2 173 166-343 120-312 (343)
220 1mda_H Methylamine dehydrogena 98.0 0.00039 1.3E-08 64.2 18.3 71 282-354 269-348 (368)
221 2mad_H Methylamine dehydrogena 98.0 0.00031 1.1E-08 65.1 17.7 131 189-353 48-196 (373)
222 3sjl_D Methylamine dehydrogena 98.0 9.4E-05 3.2E-09 68.6 13.9 147 173-352 40-208 (386)
223 2ece_A 462AA long hypothetical 98.0 0.0011 3.9E-08 62.2 20.8 152 175-349 93-286 (462)
224 2qe8_A Uncharacterized protein 97.9 0.00018 6.1E-09 65.6 14.9 166 163-352 64-278 (343)
225 3dr2_A Exported gluconolactona 97.9 0.00012 4.1E-09 65.5 13.5 109 230-349 188-303 (305)
226 2iwa_A Glutamine cyclotransfer 97.9 0.001 3.5E-08 58.4 18.9 154 170-354 70-239 (266)
227 3mbr_X Glutamine cyclotransfer 97.9 0.0021 7.3E-08 55.4 19.5 135 177-341 74-224 (243)
228 3sjl_D Methylamine dehydrogena 97.8 0.00095 3.3E-08 61.8 17.8 153 170-354 82-258 (386)
229 1npe_A Nidogen, entactin; glyc 97.8 0.0057 2E-07 53.2 20.8 159 166-354 79-240 (267)
230 3nol_A Glutamine cyclotransfer 97.7 0.0015 5.1E-08 56.9 15.8 147 166-340 85-244 (262)
231 3c75_H MADH, methylamine dehyd 97.7 0.0005 1.7E-08 64.7 13.2 140 177-350 84-246 (426)
232 3qqz_A Putative uncharacterize 97.7 0.012 4E-07 51.2 21.0 165 163-351 24-203 (255)
233 2iwa_A Glutamine cyclotransfer 97.7 0.0043 1.5E-07 54.4 18.2 162 159-354 12-183 (266)
234 2fp8_A Strictosidine synthase; 97.6 0.0037 1.3E-07 56.1 17.7 178 166-352 19-216 (322)
235 3c75_H MADH, methylamine dehyd 97.6 0.002 6.8E-08 60.6 16.0 160 172-355 223-405 (426)
236 1ijq_A LDL receptor, low-densi 97.6 0.025 8.4E-07 50.7 22.7 167 163-352 27-195 (316)
237 3nok_A Glutaminyl cyclase; bet 97.5 0.0026 9E-08 55.4 14.4 135 176-340 104-254 (268)
238 3v64_C Agrin; beta propeller, 97.5 0.016 5.4E-07 52.9 20.4 162 164-352 71-234 (349)
239 3v65_B Low-density lipoprotein 97.5 0.0092 3.2E-07 55.3 19.0 163 164-352 114-277 (386)
240 2xe4_A Oligopeptidase B; hydro 97.5 0.0055 1.9E-07 62.1 18.5 221 47-350 157-398 (751)
241 3nok_A Glutaminyl cyclase; bet 97.4 0.0033 1.1E-07 54.8 14.2 160 159-354 46-212 (268)
242 3nol_A Glutamine cyclotransfer 97.4 0.0037 1.3E-07 54.4 14.3 160 159-354 34-203 (262)
243 2p9w_A MAL S 1 allergenic prot 97.3 0.018 6E-07 51.9 18.2 164 164-352 11-215 (334)
244 3hxj_A Pyrrolo-quinoline quino 97.3 0.0079 2.7E-07 53.5 16.1 152 165-355 176-327 (330)
245 3tc9_A Hypothetical hydrolase; 97.3 0.0069 2.3E-07 57.1 16.3 156 167-351 138-300 (430)
246 2xe4_A Oligopeptidase B; hydro 97.3 0.0065 2.2E-07 61.5 17.0 159 167-352 175-354 (751)
247 3hxj_A Pyrrolo-quinoline quino 97.3 0.011 3.7E-07 52.6 16.9 148 164-350 135-282 (330)
248 1fwx_A Nitrous oxide reductase 97.3 0.011 3.7E-07 57.5 17.5 74 278-352 278-361 (595)
249 3mbr_X Glutamine cyclotransfer 97.2 0.012 4.2E-07 50.6 15.4 161 158-354 11-181 (243)
250 1kb0_A Quinohemoprotein alcoho 97.2 0.0048 1.6E-07 61.7 14.9 54 299-355 457-510 (677)
251 1yiq_A Quinohemoprotein alcoho 97.2 0.01 3.4E-07 59.5 16.4 55 298-355 454-508 (689)
252 3p5b_L Low density lipoprotein 97.1 0.11 3.8E-06 48.2 22.1 170 162-353 108-278 (400)
253 1mda_H Methylamine dehydrogena 97.1 0.0015 5.1E-08 60.3 8.5 138 179-352 33-194 (368)
254 3amr_A 3-phytase; beta-propell 97.1 0.14 4.7E-06 46.5 21.0 164 166-351 68-262 (355)
255 2fp8_A Strictosidine synthase; 97.0 0.022 7.5E-07 50.9 15.7 114 232-354 187-315 (322)
256 3kya_A Putative phosphatase; s 97.0 0.028 9.6E-07 53.7 16.3 160 167-350 140-339 (496)
257 3m0c_C LDL receptor, low-densi 96.9 0.095 3.3E-06 53.2 21.0 169 163-353 421-590 (791)
258 2p4o_A Hypothetical protein; p 96.9 0.11 3.9E-06 45.9 19.5 163 159-352 25-198 (306)
259 3sov_A LRP-6, low-density lipo 96.9 0.071 2.4E-06 47.8 17.9 162 166-352 35-197 (318)
260 3sre_A PON1, serum paraoxonase 96.9 0.045 1.5E-06 50.0 16.6 170 159-352 42-252 (355)
261 1kb0_A Quinohemoprotein alcoho 96.9 0.0053 1.8E-07 61.4 11.1 93 252-351 457-566 (677)
262 1fwx_A Nitrous oxide reductase 96.9 0.0077 2.6E-07 58.5 11.8 121 231-354 278-433 (595)
263 3v65_B Low-density lipoprotein 96.9 0.22 7.5E-06 45.8 21.4 159 166-353 159-319 (386)
264 3v64_C Agrin; beta propeller, 96.8 0.24 8.1E-06 44.9 21.1 160 166-353 116-276 (349)
265 3pbp_A Nucleoporin NUP82; beta 96.7 0.17 6E-06 47.0 19.2 113 231-347 67-207 (452)
266 1ijq_A LDL receptor, low-densi 96.5 0.41 1.4E-05 42.6 20.5 159 166-354 77-240 (316)
267 4hw6_A Hypothetical protein, I 96.5 0.12 3.9E-06 48.6 16.7 155 167-351 140-303 (433)
268 2xbg_A YCF48-like protein; pho 96.4 0.19 6.4E-06 45.1 17.3 158 162-350 159-320 (327)
269 1yiq_A Quinohemoprotein alcoho 96.4 0.05 1.7E-06 54.4 14.1 73 281-355 239-341 (689)
270 3q7m_A Lipoprotein YFGL, BAMB; 96.3 0.18 6.2E-06 45.7 16.8 100 243-354 104-209 (376)
271 3p5b_L Low density lipoprotein 96.3 0.28 9.4E-06 45.5 18.1 125 227-352 109-234 (400)
272 1n7d_A LDL receptor, low-densi 96.3 0.011 3.7E-07 59.4 8.6 165 166-352 406-571 (699)
273 3q7m_A Lipoprotein YFGL, BAMB; 96.2 0.26 8.9E-06 44.7 17.3 133 180-349 241-375 (376)
274 4a2l_A BT_4663, two-component 96.2 0.61 2.1E-05 47.1 21.6 162 166-353 310-481 (795)
275 4a2l_A BT_4663, two-component 96.2 0.57 1.9E-05 47.4 21.2 154 166-352 357-526 (795)
276 3sov_A LRP-6, low-density lipo 96.2 0.66 2.3E-05 41.4 19.6 160 166-354 79-240 (318)
277 3ei3_A DNA damage-binding prot 96.1 0.52 1.8E-05 49.9 20.8 221 51-348 811-1058(1158)
278 3qqz_A Putative uncharacterize 96.1 0.63 2.2E-05 40.2 21.9 166 166-349 70-250 (255)
279 4a0p_A LRP6, LRP-6, low-densit 96.0 1.3 4.5E-05 43.6 23.1 162 165-353 36-198 (628)
280 2p4o_A Hypothetical protein; p 95.9 0.29 1E-05 43.1 15.6 112 230-352 32-147 (306)
281 4hw6_A Hypothetical protein, I 95.8 0.58 2E-05 43.8 17.7 159 166-351 228-432 (433)
282 1k3i_A Galactose oxidase precu 95.7 0.12 4.3E-06 51.1 13.4 116 169-309 189-324 (656)
283 2xbg_A YCF48-like protein; pho 95.7 0.88 3E-05 40.6 17.9 108 227-345 160-272 (327)
284 3m0c_C LDL receptor, low-densi 95.5 1.3 4.3E-05 44.9 20.1 161 165-354 470-634 (791)
285 1k3i_A Galactose oxidase precu 95.5 0.057 2E-06 53.5 10.2 114 234-353 190-324 (656)
286 3s94_A LRP-6, low-density lipo 95.4 1.3 4.5E-05 43.4 19.6 165 163-352 37-202 (619)
287 1kv9_A Type II quinohemoprotei 95.3 0.16 5.5E-06 50.5 12.6 55 298-355 437-491 (668)
288 1n7d_A LDL receptor, low-densi 95.2 0.085 2.9E-06 52.8 10.3 155 168-352 455-614 (699)
289 3tc9_A Hypothetical hydrolase; 95.0 1.1 3.9E-05 41.7 16.7 159 167-351 227-429 (430)
290 3v9f_A Two-component system se 94.9 1.9 6.5E-05 43.4 19.6 154 166-353 313-479 (781)
291 3v9f_A Two-component system se 94.6 3 0.0001 41.9 20.0 171 166-353 258-437 (781)
292 3s94_A LRP-6, low-density lipo 94.4 4.3 0.00015 39.8 20.1 117 231-352 393-510 (619)
293 3kya_A Putative phosphatase; s 94.3 2 6.7E-05 40.9 16.6 172 167-353 248-476 (496)
294 3pbp_A Nucleoporin NUP82; beta 94.3 1.3 4.5E-05 41.1 14.8 106 239-352 30-158 (452)
295 1kv9_A Type II quinohemoprotei 94.2 0.7 2.4E-05 45.9 14.0 73 281-355 234-336 (668)
296 1flg_A Protein (quinoprotein e 94.1 2.2 7.7E-05 41.4 17.3 55 298-355 465-519 (582)
297 2ad6_A Methanol dehydrogenase 94.1 0.35 1.2E-05 47.1 11.4 83 251-340 443-526 (571)
298 4a0p_A LRP6, LRP-6, low-densit 94.0 5 0.00017 39.4 21.2 158 166-354 80-239 (628)
299 2ad6_A Methanol dehydrogenase 93.9 1.9 6.5E-05 41.8 16.2 55 298-355 443-497 (571)
300 1tl2_A L10, protein (tachylect 93.8 2.2 7.6E-05 35.9 14.1 163 160-353 33-209 (236)
301 1flg_A Protein (quinoprotein e 93.6 0.43 1.5E-05 46.6 10.9 81 251-339 465-547 (582)
302 1w6s_A Methanol dehydrogenase 93.0 3.7 0.00013 40.1 16.5 55 298-355 452-506 (599)
303 3a9g_A Putative uncharacterize 92.5 3 0.0001 37.7 14.3 151 165-339 28-215 (354)
304 2xzh_A Clathrin heavy chain 1; 92.3 6 0.00021 35.5 19.6 159 166-354 107-292 (365)
305 2ism_A Putative oxidoreductase 92.1 1.4 4.6E-05 39.9 11.5 107 229-340 30-153 (352)
306 1bpo_A Protein (clathrin); cla 91.7 8.5 0.00029 36.0 20.1 158 167-354 107-291 (494)
307 1tl2_A L10, protein (tachylect 91.7 0.58 2E-05 39.5 7.6 105 231-346 42-157 (236)
308 1xi4_A Clathrin heavy chain; a 91.7 15 0.00051 39.7 19.6 158 167-354 107-291 (1630)
309 1cru_A Protein (soluble quinop 91.5 9 0.00031 35.9 17.1 111 165-297 26-163 (454)
310 3a9g_A Putative uncharacterize 91.0 2.3 7.9E-05 38.4 11.7 108 229-340 28-153 (354)
311 2g8s_A Glucose/sorbosone dehyd 90.9 5.3 0.00018 35.9 14.1 110 230-341 18-149 (353)
312 3sre_A PON1, serum paraoxonase 90.9 4.9 0.00017 36.4 13.7 100 231-340 166-285 (355)
313 1w6s_A Methanol dehydrogenase 90.3 2.5 8.4E-05 41.3 12.0 48 291-339 486-534 (599)
314 3das_A Putative oxidoreductase 90.3 7.1 0.00024 35.2 14.2 115 224-340 26-158 (347)
315 2p9w_A MAL S 1 allergenic prot 90.3 4.5 0.00015 36.2 12.5 116 225-347 8-163 (334)
316 2ism_A Putative oxidoreductase 90.2 2.1 7.1E-05 38.6 10.7 106 166-296 31-153 (352)
317 3ei3_A DNA damage-binding prot 90.1 5.3 0.00018 42.3 14.9 154 167-352 830-999 (1158)
318 2vpj_A Kelch-like protein 12; 90.1 8.6 0.00029 33.1 16.0 100 244-353 162-279 (301)
319 2wg3_C Hedgehog-interacting pr 89.5 10 0.00036 35.6 15.2 113 230-343 14-160 (463)
320 2xn4_A Kelch-like protein 2; s 89.5 9.6 0.00033 32.8 16.6 92 252-353 173-277 (302)
321 2xzh_A Clathrin heavy chain 1; 89.4 12 0.0004 33.6 23.0 225 44-349 83-329 (365)
322 1cru_A Protein (soluble quinop 89.2 8.7 0.0003 35.9 14.5 115 224-341 21-163 (454)
323 1xi4_A Clathrin heavy chain; a 88.8 19 0.00064 38.9 17.5 200 44-323 82-303 (1630)
324 1bpo_A Protein (clathrin); cla 88.3 17 0.00057 34.1 26.1 225 44-349 82-328 (494)
325 3amr_A 3-phytase; beta-propell 87.6 16 0.00054 33.0 16.7 146 180-351 42-209 (355)
326 2zwa_A Leucine carboxyl methyl 87.2 25 0.00084 34.8 17.5 110 240-353 500-636 (695)
327 2vpj_A Kelch-like protein 12; 86.5 15 0.0005 31.6 15.7 100 244-353 115-232 (301)
328 3das_A Putative oxidoreductase 86.5 18 0.00061 32.5 14.9 150 163-338 29-218 (347)
329 2g8s_A Glucose/sorbosone dehyd 86.2 14 0.00049 33.0 13.6 151 166-338 18-214 (353)
330 1zgk_A Kelch-like ECH-associat 86.2 16 0.00054 31.6 14.0 102 244-353 124-241 (308)
331 1zgk_A Kelch-like ECH-associat 84.0 19 0.00063 31.2 13.0 102 244-353 171-288 (308)
332 3ii7_A Kelch-like protein 7; p 82.8 22 0.00075 30.5 15.9 94 252-353 169-273 (306)
333 3ii7_A Kelch-like protein 7; p 77.0 34 0.0012 29.3 15.2 100 244-353 104-226 (306)
334 2xn4_A Kelch-like protein 2; s 74.4 40 0.0014 28.8 15.8 102 244-353 111-230 (302)
335 2zwa_A Leucine carboxyl methyl 73.9 30 0.001 34.2 12.1 110 240-354 451-579 (695)
336 4asc_A Kelch repeat and BTB do 69.4 54 0.0019 28.1 14.9 100 244-353 151-278 (315)
337 3sbq_A Nitrous-oxide reductase 68.9 11 0.00039 36.2 7.2 75 277-352 323-408 (638)
338 1sqj_A OXG-RCBH, oligoxylogluc 68.1 1E+02 0.0035 30.8 15.8 156 165-341 14-189 (789)
339 3qhy_B Beta-lactamase inhibito 66.0 64 0.0022 27.7 12.7 105 167-308 25-129 (282)
340 3qhy_B Beta-lactamase inhibito 63.6 71 0.0024 27.4 14.1 144 167-352 103-246 (282)
341 2woz_A Kelch repeat and BTB do 60.9 80 0.0027 27.1 12.0 102 244-353 161-288 (318)
342 4gq2_M Nucleoporin NUP120; bet 59.7 37 0.0013 35.0 9.6 37 278-316 237-273 (950)
343 2be1_A Serine/threonine-protei 59.4 44 0.0015 29.8 9.0 26 291-317 113-138 (339)
344 4gq2_M Nucleoporin NUP120; bet 59.2 97 0.0033 31.9 12.7 31 231-262 237-267 (950)
345 3b7f_A Glycosyl hydrolase, BNR 58.5 1E+02 0.0035 27.5 16.4 109 231-343 116-254 (394)
346 4asc_A Kelch repeat and BTB do 56.4 95 0.0032 26.5 16.7 94 252-353 117-222 (315)
347 2uvk_A YJHT; unknown function, 54.9 1.1E+02 0.0037 26.7 12.9 52 300-354 286-344 (357)
348 3s25_A Hypothetical 7-bladed b 54.8 34 0.0012 29.9 7.4 64 283-353 110-177 (302)
349 3ott_A Two-component system se 53.6 1.7E+02 0.0059 28.7 17.5 152 166-353 63-221 (758)
350 2be1_A Serine/threonine-protei 52.9 19 0.00065 32.2 5.4 106 244-355 12-133 (339)
351 1sqj_A OXG-RCBH, oligoxylogluc 51.1 1.7E+02 0.0058 29.2 12.7 110 230-340 15-140 (789)
352 2cn3_A Xyloglucanase, beta-1,4 48.8 2.1E+02 0.0071 28.2 15.8 113 166-297 23-152 (737)
353 2woz_A Kelch repeat and BTB do 46.1 1.4E+02 0.0048 25.5 13.5 91 254-353 80-185 (318)
354 3b7f_A Glycosyl hydrolase, BNR 45.3 1.6E+02 0.0056 26.0 17.2 115 231-347 233-367 (394)
355 3sbq_A Nitrous-oxide reductase 38.1 95 0.0032 30.0 7.8 92 160-261 317-408 (638)
356 3a0f_A Xyloglucanase; beta-pro 37.5 3.2E+02 0.011 27.1 18.8 171 158-343 13-203 (763)
357 2cn3_A Xyloglucanase, beta-1,4 36.3 3.2E+02 0.011 26.8 12.9 108 231-340 24-151 (737)
358 3ott_A Two-component system se 28.0 4.3E+02 0.015 25.8 18.4 147 167-352 473-626 (758)
359 3s25_A Hypothetical 7-bladed b 27.3 3E+02 0.01 23.6 12.4 64 235-308 109-176 (302)
360 4fhn_B Nucleoporin NUP120; pro 26.5 36 0.0012 35.9 3.1 32 322-354 239-270 (1139)
361 4a9v_A PHOX; hydrolase, beta-p 26.2 3.2E+02 0.011 26.3 9.4 62 277-340 476-550 (592)
362 4fhn_B Nucleoporin NUP120; pro 26.0 1.1E+02 0.0036 32.3 6.6 31 231-262 239-269 (1139)
363 3f7f_A Nucleoporin NUP120; nuc 25.2 66 0.0023 31.9 4.5 30 322-354 223-252 (729)
364 2uvk_A YJHT; unknown function, 24.6 3.3E+02 0.011 23.3 9.1 92 244-342 22-128 (357)
365 2loj_A Putative cytoplasmic pr 22.0 86 0.003 20.3 3.1 23 160-183 40-62 (63)
366 2wg3_C Hedgehog-interacting pr 21.2 4.9E+02 0.017 24.0 12.8 30 166-196 14-44 (463)
367 2jra_A Protein RPA2121; domain 20.4 1E+02 0.0036 20.1 3.3 23 160-183 44-66 (67)
No 1
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=2.2e-42 Score=330.62 Aligned_cols=283 Identities=29% Similarity=0.498 Sum_probs=219.1
Q ss_pred CCCeeeeCCcccCCCCceeeeChhHHHhhhcccccCcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEe
Q 018322 32 LPTKVWQPGVDKLEEGEELQCDPTAYNSLHAFHIGWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKV 111 (358)
Q Consensus 32 ~~~~~~~p~~~~~~~~~~l~~~~~~Y~~~~~~~~~wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~ 111 (358)
++.++|+...+ +||+++|++.++||||+|||+|+..+..+.+|| .++|++||++.+ ..|+|+|+++
T Consensus 23 ~~~~~wk~n~~------------~~y~~~~~~~l~wp~l~~~~~p~~~~~~~~~~~-~~~~~~GT~t~~-~~n~i~i~~~ 88 (430)
T 2xyi_A 23 EEYKIWKKNTP------------FLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYS-VHRLILGTHTSD-EQNHLLIASV 88 (430)
T ss_dssp HHHHHHHHHHH------------HHEEEEEEEECSSCCSCEEECSCCEECTTCSCE-EEEEEEECCCSS-SCEEEEEEEE
T ss_pred HHHhhHhhCCh------------HHHHHHhhcCCCCCceEEEECcccccccCCCcc-eEEEEEEEcCCC-CCCEEEEEEE
Confidence 34667777655 999999999999999999999999888888898 599999999998 9999999999
Q ss_pred eccCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCCC--CCCCeE-EEEEecCCCceeEEEEcCCCCcEEEEEeCCC
Q 018322 112 SNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDDDEEGG--SGTPIL-QLRKVAHQGCVNRIRAMTQNPHICASWADTG 188 (358)
Q Consensus 112 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg 188 (358)
. ++...... ++.++ ++++++.++ ...+.+ ....+.|.+.|++++|+|+++.+||+++.+|
T Consensus 89 ~-lp~~~~~~------------~~~~~----d~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg 151 (430)
T 2xyi_A 89 Q-LPSEDAQF------------DGSHY----DNEKGEFGGFGSVCGKIEIEIKINHEGEVNRARYMPQNACVIATKTPSS 151 (430)
T ss_dssp E-EC------------------------------------------CEEEEEEEEESSCCSEEEEETTEEEEEEEECSSS
T ss_pred E-CCCCcccc------------ccccc----cccccccccccCCCCceEEEEEEcCCCcEEEEEECCCCCcEEEEECCCC
Confidence 6 44321110 11111 111111110 124444 4778899999999999998658999999999
Q ss_pred cEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCc---
Q 018322 189 HVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATW--- 265 (358)
Q Consensus 189 ~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~--- 265 (358)
.|+||++.......... ....++..+.+|...|++|+|+|.+.++|++|+.||.|++|++......
T Consensus 152 ~V~vwd~~~~~~~~~~~-----------~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 220 (430)
T 2xyi_A 152 DVLVFDYTKHPSKPEPS-----------GECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRV 220 (430)
T ss_dssp CEEEEEGGGSCSSCCTT-----------CCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGE
T ss_pred cEEEEECCCcccccCcc-----------ccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCce
Confidence 99999997632221100 1256778899999999999999998879999999999999999873321
Q ss_pred ccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCC--CeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCC
Q 018322 266 NVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGK--SALTSFKAHNADVNVISWNRLASCLLASGSDDG 343 (358)
Q Consensus 266 ~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~--~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg 343 (358)
......+.+|...|.+++|+|.+..+|++|+.||.|++||++.+. .++..+..|...|++|+|+|++..+|++|+.||
T Consensus 221 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg 300 (430)
T 2xyi_A 221 IDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADK 300 (430)
T ss_dssp EECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTS
T ss_pred eccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCC
Confidence 111345668999999999999766699999999999999999853 467778899999999999999967999999999
Q ss_pred CEEEEeCCCCCCC
Q 018322 344 TFSIHDLRLLKVR 356 (358)
Q Consensus 344 ~i~iwDlr~~~~~ 356 (358)
.|+|||+++.+.+
T Consensus 301 ~v~vwd~~~~~~~ 313 (430)
T 2xyi_A 301 TVALWDLRNLKLK 313 (430)
T ss_dssp EEEEEETTCTTSC
T ss_pred eEEEEeCCCCCCC
Confidence 9999999986654
No 2
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=9.1e-31 Score=243.11 Aligned_cols=210 Identities=17% Similarity=0.253 Sum_probs=171.6
Q ss_pred cCcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018322 66 GWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (358)
Q Consensus 66 ~wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (358)
+-+..++.|.|+. +|++|+ .++.|.||++..-
T Consensus 82 ~~~v~~~~~s~d~------------~l~~~s-----~dg~v~lWd~~~~------------------------------- 113 (344)
T 4gqb_B 82 EAGVADLTWVGER------------GILVAS-----DSGAVELWELDEN------------------------------- 113 (344)
T ss_dssp SSCEEEEEEETTT------------EEEEEE-----TTSEEEEEEECTT-------------------------------
T ss_pred CCCEEEEEEeCCC------------eEEEEE-----CCCEEEEEeccCC-------------------------------
Confidence 4456677787763 577776 4679999998310
Q ss_pred CccCCCCCCCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEE
Q 018322 146 DDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF 225 (358)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (358)
.....+.....+|.+.|++|+|+|++ .+||+|+.||+|+|||+.. .+++..+
T Consensus 114 ------~~~~~~~~~~~~H~~~V~~v~~spdg-~~l~sgs~d~~i~iwd~~~---------------------~~~~~~~ 165 (344)
T 4gqb_B 114 ------ETLIVSKFCKYEHDDIVSTVSVLSSG-TQAVSGSKDICIKVWDLAQ---------------------QVVLSSY 165 (344)
T ss_dssp ------SSCEEEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTT---------------------TEEEEEE
T ss_pred ------CceeEeeccccCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECCC---------------------CcEEEEE
Confidence 01234445677999999999999999 7999999999999999987 5778889
Q ss_pred cCCCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEE
Q 018322 226 GGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWD 305 (358)
Q Consensus 226 ~~h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD 305 (358)
.+|...|++++|++++..+|++|+.|++|++||++++.... ......|...+.+++|+|.+..+|++|+.||+|+|||
T Consensus 166 ~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd 243 (344)
T 4gqb_B 166 RAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPAS--QIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVD 243 (344)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEE--ECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEE
T ss_pred cCcCCceEEEEecCCCCCceeeeccccccccccccccceee--eeecceeeccceeeeecCCCCcceEEeccCCcEEEEE
Confidence 99999999999999987689999999999999998744322 1123446678999999998777999999999999999
Q ss_pred CCCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 306 TRVGKSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 306 ~r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
++++ .++..+.+|...|++++|+|++..+||+|+.||+|+|||+++.+
T Consensus 244 ~~~~-~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~ 291 (344)
T 4gqb_B 244 TKST-SCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSE 291 (344)
T ss_dssp SCC---CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCE
T ss_pred CCCC-cEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCc
Confidence 9985 57888999999999999999986789999999999999998753
No 3
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.98 E-value=4.7e-30 Score=238.29 Aligned_cols=204 Identities=21% Similarity=0.262 Sum_probs=167.4
Q ss_pred CcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018322 67 WPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDD 146 (358)
Q Consensus 67 wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (358)
-+..++.|.|++ .+|+.|+ .++.|.||++.
T Consensus 128 ~~V~~v~~spdg-----------~~l~sgs-----~d~~i~iwd~~---------------------------------- 157 (344)
T 4gqb_B 128 DIVSTVSVLSSG-----------TQAVSGS-----KDICIKVWDLA---------------------------------- 157 (344)
T ss_dssp SCEEEEEECTTS-----------SEEEEEE-----TTSCEEEEETT----------------------------------
T ss_pred CCEEEEEECCCC-----------CEEEEEe-----CCCeEEEEECC----------------------------------
Confidence 456677777774 4778777 45689999873
Q ss_pred ccCCCCCCCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEE-
Q 018322 147 DEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF- 225 (358)
Q Consensus 147 ~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 225 (358)
.......+.+|.+.|+++.|+|++..+|++++.||+|+|||+.. .++...+
T Consensus 158 -------~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~---------------------~~~~~~~~ 209 (344)
T 4gqb_B 158 -------QQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRC---------------------PKPASQIG 209 (344)
T ss_dssp -------TTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTS---------------------SSCEEECC
T ss_pred -------CCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccc---------------------cceeeeee
Confidence 33455677899999999999999878999999999999999987 3444444
Q ss_pred -cCCCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEE
Q 018322 226 -GGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIW 304 (358)
Q Consensus 226 -~~h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iw 304 (358)
..|...+.+++|+|.+..+|++|+.||+|++||++++.. ...+.+|...|++|+|+|++..+||+|+.|++|+||
T Consensus 210 ~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~----~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vw 285 (344)
T 4gqb_B 210 CSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSC----VLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVL 285 (344)
T ss_dssp ----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--C----CEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEE
T ss_pred cceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcE----EEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEE
Confidence 345567999999997765899999999999999987432 367889999999999999986689999999999999
Q ss_pred ECCCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 305 DTRVGKSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 305 D~r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
|++++ .+..+.+|...|++++|+|++..+|+|||.||+|++|++.+..
T Consensus 286 d~~~~--~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 286 DSSLS--ELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp CTTCC--EEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred ECCCC--cEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 99874 4566789999999999999997789999999999999997654
No 4
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.97 E-value=8.1e-29 Score=225.58 Aligned_cols=205 Identities=20% Similarity=0.326 Sum_probs=170.0
Q ss_pred cCcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018322 66 GWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (358)
Q Consensus 66 ~wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (358)
.-|..++.|.|++ .+|++|+ .++.|.||++.
T Consensus 55 ~~~v~~~~~~~~~-----------~~l~s~s-----~d~~i~vwd~~--------------------------------- 85 (304)
T 2ynn_A 55 ETPVRAGKFIARK-----------NWIIVGS-----DDFRIRVFNYN--------------------------------- 85 (304)
T ss_dssp SSCEEEEEEEGGG-----------TEEEEEE-----TTSEEEEEETT---------------------------------
T ss_pred CCcEEEEEEeCCC-----------CEEEEEC-----CCCEEEEEECC---------------------------------
Confidence 4577788888875 4788887 56799999872
Q ss_pred CccCCCCCCCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEE
Q 018322 146 DDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF 225 (358)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (358)
.......+.+|.+.|++++|+|++ .+|++|+.||+|+|||+.. .......+
T Consensus 86 --------~~~~~~~~~~h~~~v~~~~~~~~~-~~l~sgs~D~~v~lWd~~~--------------------~~~~~~~~ 136 (304)
T 2ynn_A 86 --------TGEKVVDFEAHPDYIRSIAVHPTK-PYVLSGSDDLTVKLWNWEN--------------------NWALEQTF 136 (304)
T ss_dssp --------TCCEEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEEGGG--------------------TTEEEEEE
T ss_pred --------CCcEEEEEeCCCCcEEEEEEcCCC-CEEEEECCCCeEEEEECCC--------------------Ccchhhhh
Confidence 222335667899999999999999 7999999999999999876 23445678
Q ss_pred cCCCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECC--CCCCEEEEEECCCcEEE
Q 018322 226 GGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSP--TEPDVFASCSVDGHIAI 303 (358)
Q Consensus 226 ~~h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp--~~~~~las~s~Dg~I~i 303 (358)
.+|...|.+++|+|.+..+|++|+.|++|++||++...... ....+|...|..++|+| ++. +|++|+.|++|+|
T Consensus 137 ~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~-~l~s~s~D~~i~i 212 (304)
T 2ynn_A 137 EGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNF---TLTTGQERGVNYVDYYPLPDKP-YMITASDDLTIKI 212 (304)
T ss_dssp CCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSE---EEECCCTTCEEEEEECCSTTCC-EEEEEETTSEEEE
T ss_pred cccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccc---eeccCCcCcEEEEEEEEcCCCC-EEEEEcCCCeEEE
Confidence 89999999999999644499999999999999997643221 22345678899999987 455 9999999999999
Q ss_pred EECCCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 304 WDTRVGKSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 304 wD~r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
||++++ .++..+.+|...|++++|+|++ .+|++|+.||+|+|||+++++
T Consensus 213 Wd~~~~-~~~~~~~~h~~~v~~~~~~p~~-~~l~s~s~Dg~i~iWd~~~~~ 261 (304)
T 2ynn_A 213 WDYQTK-SCVATLEGHMSNVSFAVFHPTL-PIIISGSEDGTLKIWNSSTYK 261 (304)
T ss_dssp EETTTT-EEEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTCC
T ss_pred EeCCCC-ccceeeCCCCCCEEEEEECCCC-CEEEEEcCCCeEEEEECCCCc
Confidence 999984 5888899999999999999999 899999999999999998765
No 5
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.97 E-value=9.7e-29 Score=225.04 Aligned_cols=203 Identities=17% Similarity=0.255 Sum_probs=169.5
Q ss_pred cceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 018322 68 PCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDDD 147 (358)
Q Consensus 68 P~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (358)
+..++.|-|++ .+|++|. .++.|.||++.
T Consensus 15 ~V~~~~fsp~~-----------~~l~s~~-----~dg~v~lWd~~----------------------------------- 43 (304)
T 2ynn_A 15 RVKGIDFHPTE-----------PWVLTTL-----YSGRVELWNYE----------------------------------- 43 (304)
T ss_dssp CEEEEEECSSS-----------SEEEEEE-----TTSEEEEEETT-----------------------------------
T ss_pred ceEEEEECCCC-----------CEEEEEc-----CCCcEEEEECC-----------------------------------
Confidence 45688888875 4778777 45699999873
Q ss_pred cCCCCCCCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcC
Q 018322 148 EEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGG 227 (358)
Q Consensus 148 ~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (358)
.......+..|...|++++|+|++ .+|++|+.|++|+|||+.. ...+..+.+
T Consensus 44 ------~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~s~d~~i~vwd~~~---------------------~~~~~~~~~ 95 (304)
T 2ynn_A 44 ------TQVEVRSIQVTETPVRAGKFIARK-NWIIVGSDDFRIRVFNYNT---------------------GEKVVDFEA 95 (304)
T ss_dssp ------TTEEEEEEECCSSCEEEEEEEGGG-TEEEEEETTSEEEEEETTT---------------------CCEEEEEEC
T ss_pred ------CCceeEEeeccCCcEEEEEEeCCC-CEEEEECCCCEEEEEECCC---------------------CcEEEEEeC
Confidence 233445667899999999999998 7999999999999999987 567788999
Q ss_pred CCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECC
Q 018322 228 HKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTR 307 (358)
Q Consensus 228 h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r 307 (358)
|...|++++|+|++. +|++|+.||+|++||+++.... ...+.+|...|.+++|+|.+..+|++|+.|++|++||++
T Consensus 96 h~~~v~~~~~~~~~~-~l~sgs~D~~v~lWd~~~~~~~---~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~ 171 (304)
T 2ynn_A 96 HPDYIRSIAVHPTKP-YVLSGSDDLTVKLWNWENNWAL---EQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLG 171 (304)
T ss_dssp CSSCEEEEEECSSSS-EEEEEETTSCEEEEEGGGTTEE---EEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETT
T ss_pred CCCcEEEEEEcCCCC-EEEEECCCCeEEEEECCCCcch---hhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECC
Confidence 999999999999998 9999999999999999764332 245788999999999999655599999999999999998
Q ss_pred CCCCeeEEEecCCCCeEEEEEeC--CCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 308 VGKSALTSFKAHNADVNVISWNR--LASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 308 ~~~~~~~~~~~h~~~V~~i~~~p--~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
...........|...|+.+.|+| ++ .+|++|+.||+|+|||+++.+
T Consensus 172 ~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~s~s~D~~i~iWd~~~~~ 219 (304)
T 2ynn_A 172 QSTPNFTLTTGQERGVNYVDYYPLPDK-PYMITASDDLTIKIWDYQTKS 219 (304)
T ss_dssp CSSCSEEEECCCTTCEEEEEECCSTTC-CEEEEEETTSEEEEEETTTTE
T ss_pred CCCccceeccCCcCcEEEEEEEEcCCC-CEEEEEcCCCeEEEEeCCCCc
Confidence 85433333356778899999987 45 799999999999999998764
No 6
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.97 E-value=8.4e-29 Score=227.51 Aligned_cols=164 Identities=20% Similarity=0.299 Sum_probs=148.4
Q ss_pred EEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEe
Q 018322 158 QLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDW 237 (358)
Q Consensus 158 ~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 237 (358)
...+..|...|.+++|+|++ .+||+|+.||.|+|||+.. .+.+..+.+|...|++++|
T Consensus 157 ~~~~~~~~~~v~~~~~spdg-~~lasg~~dg~i~iwd~~~---------------------~~~~~~~~~h~~~v~~l~~ 214 (321)
T 3ow8_A 157 EYSLDTRGKFILSIAYSPDG-KYLASGAIDGIINIFDIAT---------------------GKLLHTLEGHAMPIRSLTF 214 (321)
T ss_dssp EEEEECSSSCEEEEEECTTS-SEEEEEETTSCEEEEETTT---------------------TEEEEEECCCSSCCCEEEE
T ss_pred eEEecCCCceEEEEEECCCC-CEEEEEcCCCeEEEEECCC---------------------CcEEEEEcccCCceeEEEE
Confidence 34566788999999999999 7999999999999999986 5667788999999999999
Q ss_pred CCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEe
Q 018322 238 NPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFK 317 (358)
Q Consensus 238 s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~ 317 (358)
+|++. +|++|+.||+|++||++.... . ..+.+|...|.+++|+|++. +|++|+.|++|+|||++++ .++..+.
T Consensus 215 spd~~-~l~s~s~dg~i~iwd~~~~~~-~---~~~~~h~~~v~~~~~sp~~~-~l~s~s~D~~v~iwd~~~~-~~~~~~~ 287 (321)
T 3ow8_A 215 SPDSQ-LLVTASDDGYIKIYDVQHANL-A---GTLSGHASWVLNVAFCPDDT-HFVSSSSDKSVKVWDVGTR-TCVHTFF 287 (321)
T ss_dssp CTTSC-EEEEECTTSCEEEEETTTCCE-E---EEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTT-EEEEEEC
T ss_pred cCCCC-EEEEEcCCCeEEEEECCCcce-e---EEEcCCCCceEEEEECCCCC-EEEEEeCCCcEEEEeCCCC-EEEEEEc
Confidence 99998 999999999999999987432 2 56788999999999999998 9999999999999999984 6888889
Q ss_pred cCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCC
Q 018322 318 AHNADVNVISWNRLASCLLASGSDDGTFSIHDLR 351 (358)
Q Consensus 318 ~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr 351 (358)
.|...|++++|+|++ .+|++++.||+|+|||+.
T Consensus 288 ~h~~~v~~v~~s~~g-~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 288 DHQDQVWGVKYNGNG-SKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp CCSSCEEEEEECTTS-SEEEEEETTCCEEEEECC
T ss_pred CCCCcEEEEEECCCC-CEEEEEeCCCeEEEEeCC
Confidence 999999999999999 899999999999999963
No 7
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.97 E-value=1.1e-28 Score=229.97 Aligned_cols=172 Identities=19% Similarity=0.316 Sum_probs=151.4
Q ss_pred EEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEe
Q 018322 158 QLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDW 237 (358)
Q Consensus 158 ~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 237 (358)
.....+|.+.|++++|+|++ .+|++|+.||+|+|||+.. .+++..+.+|...|++++|
T Consensus 132 ~~~~~~h~~~V~~v~~spdg-~~l~sgs~dg~v~iwd~~~---------------------~~~~~~~~~h~~~v~~v~~ 189 (357)
T 4g56_B 132 KFAKYEHDDIVKTLSVFSDG-TQAVSGGKDFSVKVWDLSQ---------------------KAVLKSYNAHSSEVNCVAA 189 (357)
T ss_dssp CEEECCCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTT---------------------TEEEEEECCCSSCEEEEEE
T ss_pred eeccCCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECCC---------------------CcEEEEEcCCCCCEEEEEE
Confidence 35567899999999999999 7999999999999999987 5677889999999999999
Q ss_pred CCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEe
Q 018322 238 NPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFK 317 (358)
Q Consensus 238 s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~ 317 (358)
++++.++|++++.||+|++||++++.... ...+..|...+.+++|+|++..+|++|+.|+.|++||++++ .++..+.
T Consensus 190 s~~~~~~~~s~~~dg~v~~wd~~~~~~~~--~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~-~~~~~~~ 266 (357)
T 4g56_B 190 CPGKDTIFLSCGEDGRILLWDTRKPKPAT--RIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNP-DSAQTSA 266 (357)
T ss_dssp CTTCSSCEEEEETTSCEEECCTTSSSCBC--BCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCG-GGCEEEC
T ss_pred ccCCCceeeeeccCCceEEEECCCCceee--eeeeccccccccchhhhhcccceEEEeecccceeEEECCCC-cEeEEEe
Confidence 99987789999999999999998744322 23345677889999999998779999999999999999985 5778889
Q ss_pred cCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 318 AHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 318 ~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
.|...|++++|+|++..+||+|+.||+|+|||+++.+
T Consensus 267 ~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~ 303 (357)
T 4g56_B 267 VHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSE 303 (357)
T ss_dssp CCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCE
T ss_pred ccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCc
Confidence 9999999999999987899999999999999998754
No 8
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.97 E-value=2.3e-28 Score=227.89 Aligned_cols=205 Identities=20% Similarity=0.246 Sum_probs=166.1
Q ss_pred cCcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018322 66 GWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (358)
Q Consensus 66 ~wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (358)
.-+..++.|.|++ .+|+.|+ .++.|.||++.
T Consensus 139 ~~~V~~v~~spdg-----------~~l~sgs-----~dg~v~iwd~~--------------------------------- 169 (357)
T 4g56_B 139 DDIVKTLSVFSDG-----------TQAVSGG-----KDFSVKVWDLS--------------------------------- 169 (357)
T ss_dssp SSCEEEEEECSSS-----------SEEEEEE-----TTSCEEEEETT---------------------------------
T ss_pred CCCEEEEEECCCC-----------CEEEEEe-----CCCeEEEEECC---------------------------------
Confidence 3466788888875 4777777 45689999762
Q ss_pred CccCCCCCCCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcE--
Q 018322 146 DDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLV-- 223 (358)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 223 (358)
.......+.+|.+.|++++|+|++..++++++.||+|+|||+... ++..
T Consensus 170 --------~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~---------------------~~~~~~ 220 (357)
T 4g56_B 170 --------QKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKP---------------------KPATRI 220 (357)
T ss_dssp --------TTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSS---------------------SCBCBC
T ss_pred --------CCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCC---------------------ceeeee
Confidence 334556677899999999999998779999999999999999762 2222
Q ss_pred EEcCCCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEE
Q 018322 224 KFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAI 303 (358)
Q Consensus 224 ~~~~h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~i 303 (358)
.+..|...+.+++|+|++..+|++|+.|+.|++||++++.. ...+.+|...|++++|+|++..+||+|+.|++|+|
T Consensus 221 ~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~----~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~i 296 (357)
T 4g56_B 221 DFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDS----AQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAV 296 (357)
T ss_dssp CCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGG----CEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEE
T ss_pred eeccccccccchhhhhcccceEEEeecccceeEEECCCCcE----eEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEE
Confidence 23456778999999998765899999999999999987432 35678899999999999998768999999999999
Q ss_pred EECCCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 304 WDTRVGKSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 304 wD~r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
||++++ + +....+|...|++|+|+|....+|+||+.||+|++||+.+..
T Consensus 297 wd~~~~-~-~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 297 LDADFS-E-VFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp ECTTSC-E-EEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC---
T ss_pred EECCCC-c-EeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCC
Confidence 999974 3 344568999999999999433899999999999999997643
No 9
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.96 E-value=2.2e-28 Score=226.74 Aligned_cols=206 Identities=18% Similarity=0.303 Sum_probs=169.3
Q ss_pred cceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 018322 68 PCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDDD 147 (358)
Q Consensus 68 P~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (358)
++..+.|-|++ .+|++|. .++.|.||++..
T Consensus 18 ~v~~l~~sp~g-----------~~las~~-----~D~~i~iw~~~~---------------------------------- 47 (345)
T 3fm0_A 18 RCWFLAWNPAG-----------TLLASCG-----GDRRIRIWGTEG---------------------------------- 47 (345)
T ss_dssp CEEEEEECTTS-----------SCEEEEE-----TTSCEEEEEEET----------------------------------
T ss_pred cEEEEEECCCC-----------CEEEEEc-----CCCeEEEEEcCC----------------------------------
Confidence 56788898885 4677777 466899998841
Q ss_pred cCCCCCCCeEE-EEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEc
Q 018322 148 EEGGSGTPILQ-LRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG 226 (358)
Q Consensus 148 ~~~~~~~~~~~-~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (358)
...... ....+|.+.|++++|+|++ .+||+|+.|++|+||++... ....+..+.
T Consensus 48 -----~~~~~~~~~~~~h~~~v~~~~~sp~g-~~l~s~s~D~~v~iw~~~~~-------------------~~~~~~~~~ 102 (345)
T 3fm0_A 48 -----DSWICKSVLSEGHQRTVRKVAWSPCG-NYLASASFDATTCIWKKNQD-------------------DFECVTTLE 102 (345)
T ss_dssp -----TEEEEEEEECSSCSSCEEEEEECTTS-SEEEEEETTSCEEEEEECCC--------------------EEEEEEEC
T ss_pred -----CcceeeeeeccccCCcEEEEEECCCC-CEEEEEECCCcEEEEEccCC-------------------CeEEEEEcc
Confidence 011222 2335799999999999998 79999999999999998762 124567789
Q ss_pred CCCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEEC
Q 018322 227 GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDT 306 (358)
Q Consensus 227 ~h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~ 306 (358)
+|...|++++|+|++. +|++|+.|++|++||++..... .....+.+|...|.+++|+|++. +|++|+.|++|++||+
T Consensus 103 ~h~~~v~~v~~sp~~~-~l~s~s~D~~v~iwd~~~~~~~-~~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~d~~i~~w~~ 179 (345)
T 3fm0_A 103 GHENEVKSVAWAPSGN-LLATCSRDKSVWVWEVDEEDEY-ECVSVLNSHTQDVKHVVWHPSQE-LLASASYDDTVKLYRE 179 (345)
T ss_dssp CCSSCEEEEEECTTSS-EEEEEETTSCEEEEEECTTSCE-EEEEEECCCCSCEEEEEECSSSS-CEEEEETTSCEEEEEE
T ss_pred CCCCCceEEEEeCCCC-EEEEEECCCeEEEEECCCCCCe-EEEEEecCcCCCeEEEEECCCCC-EEEEEeCCCcEEEEEe
Confidence 9999999999999998 9999999999999999764331 11245678999999999999998 9999999999999999
Q ss_pred CCCC-CeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCC
Q 018322 307 RVGK-SALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRL 352 (358)
Q Consensus 307 r~~~-~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~ 352 (358)
+.+. .+...+.+|...|++++|+|++ .+|++|+.||+|+|||++.
T Consensus 180 ~~~~~~~~~~~~~h~~~v~~l~~sp~g-~~l~s~s~D~~v~iW~~~~ 225 (345)
T 3fm0_A 180 EEDDWVCCATLEGHESTVWSLAFDPSG-QRLASCSDDRTVRIWRQYL 225 (345)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEEEEC
T ss_pred cCCCEEEEEEecCCCCceEEEEECCCC-CEEEEEeCCCeEEEecccc
Confidence 8743 2456778999999999999999 9999999999999999754
No 10
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.96 E-value=9.2e-28 Score=222.04 Aligned_cols=166 Identities=17% Similarity=0.226 Sum_probs=144.6
Q ss_pred eEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEE
Q 018322 156 ILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAI 235 (358)
Q Consensus 156 ~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 235 (358)
.....+.+|.+.|+++.|+|++ .++++|+.||+|++||+.. ..++..+.+|...|+++
T Consensus 175 ~~~~~~~~h~~~v~~~~~~~~~-~~l~sg~~d~~v~~wd~~~---------------------~~~~~~~~~h~~~v~~v 232 (340)
T 1got_B 175 QQTTTFTGHTGDVMSLSLAPDT-RLFVSGACDASAKLWDVRE---------------------GMCRQTFTGHESDINAI 232 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTT---------------------CSEEEEECCCSSCEEEE
T ss_pred cEEEEEcCCCCceEEEEECCCC-CEEEEEeCCCcEEEEECCC---------------------CeeEEEEcCCcCCEEEE
Confidence 3445677899999999999988 7999999999999999986 56778899999999999
Q ss_pred EeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEE
Q 018322 236 DWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTS 315 (358)
Q Consensus 236 ~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~ 315 (358)
+|+|++. +|++|+.||+|++||++...... ......+...|.+++|+|++. +|++|+.||.|++||++.+ ..+..
T Consensus 233 ~~~p~~~-~l~s~s~d~~v~iwd~~~~~~~~--~~~~~~~~~~v~~~~~s~~g~-~l~~g~~d~~i~vwd~~~~-~~~~~ 307 (340)
T 1got_B 233 CFFPNGN-AFATGSDDATCRLFDLRADQELM--TYSHDNIICGITSVSFSKSGR-LLLAGYDDFNCNVWDALKA-DRAGV 307 (340)
T ss_dssp EECTTSS-EEEEEETTSCEEEEETTTTEEEE--EECCTTCCSCEEEEEECTTSS-EEEEEETTSEEEEEETTTC-CEEEE
T ss_pred EEcCCCC-EEEEEcCCCcEEEEECCCCcEEE--EEccCCcccceEEEEECCCCC-EEEEECCCCeEEEEEcccC-cEeeE
Confidence 9999998 99999999999999998743211 111223445799999999998 9999999999999999985 57778
Q ss_pred EecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEe
Q 018322 316 FKAHNADVNVISWNRLASCLLASGSDDGTFSIHD 349 (358)
Q Consensus 316 ~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwD 349 (358)
+.+|...|++++|+|++ .+|+||+.||+|+|||
T Consensus 308 ~~~h~~~v~~~~~s~dg-~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 308 LAGHDNRVSCLGVTDDG-MAVATGSWDSFLKIWN 340 (340)
T ss_dssp EECCSSCEEEEEECTTS-SCEEEEETTSCEEEEC
T ss_pred eecCCCcEEEEEEcCCC-CEEEEEcCCccEEecC
Confidence 89999999999999999 8999999999999997
No 11
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.96 E-value=1.3e-27 Score=221.20 Aligned_cols=171 Identities=25% Similarity=0.420 Sum_probs=147.1
Q ss_pred eEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEE
Q 018322 156 ILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAI 235 (358)
Q Consensus 156 ~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 235 (358)
.....+.+|.+.|++++|+|++ .++++++.|++|+|||+.. ...+..+.+|...|+++
T Consensus 67 ~~~~~l~~h~~~V~~~~~~~~~-~~l~s~s~D~~v~lwd~~~---------------------~~~~~~~~~h~~~v~~v 124 (343)
T 2xzm_R 67 IPHKALTGHNHFVSDLALSQEN-CFAISSSWDKTLRLWDLRT---------------------GTTYKRFVGHQSEVYSV 124 (343)
T ss_dssp EEEEEECCCSSCEEEEEECSST-TEEEEEETTSEEEEEETTS---------------------SCEEEEEECCCSCEEEE
T ss_pred cccchhccCCCceEEEEECCCC-CEEEEEcCCCcEEEEECCC---------------------CcEEEEEcCCCCcEEEE
Confidence 3445678999999999999998 7999999999999999987 56777899999999999
Q ss_pred EeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCC---------CEEEEEECCCcEEEEEC
Q 018322 236 DWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEP---------DVFASCSVDGHIAIWDT 306 (358)
Q Consensus 236 ~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~---------~~las~s~Dg~I~iwD~ 306 (358)
+|+|++. +|++|+.|++|++||+... . ........+|...|.+++|+|.+. .+|++++.||.|++||.
T Consensus 125 ~~sp~~~-~l~s~~~d~~i~~wd~~~~-~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~ 201 (343)
T 2xzm_R 125 AFSPDNR-QILSAGAEREIKLWNILGE-C-KFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT 201 (343)
T ss_dssp EECSSTT-EEEEEETTSCEEEEESSSC-E-EEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET
T ss_pred EECCCCC-EEEEEcCCCEEEEEeccCC-c-eeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC
Confidence 9999998 9999999999999999742 1 111233457899999999999872 38999999999999995
Q ss_pred CCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 307 RVGKSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 307 r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
+. .....+.+|...|++++|+|++ .+|++|+.||.|+|||+++..
T Consensus 202 ~~--~~~~~~~~h~~~v~~~~~s~~g-~~l~sgs~dg~v~iwd~~~~~ 246 (343)
T 2xzm_R 202 NF--QIRYTFKAHESNVNHLSISPNG-KYIATGGKDKKLLIWDILNLT 246 (343)
T ss_dssp TT--EEEEEEECCSSCEEEEEECTTS-SEEEEEETTCEEEEEESSCCS
T ss_pred CC--ceeEEEcCccccceEEEECCCC-CEEEEEcCCCeEEEEECCCCc
Confidence 43 4667788999999999999999 999999999999999996544
No 12
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.96 E-value=2.8e-28 Score=231.51 Aligned_cols=202 Identities=20% Similarity=0.296 Sum_probs=172.1
Q ss_pred CcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018322 67 WPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDD 146 (358)
Q Consensus 67 wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (358)
-|..++.|.|+. .+|++|+ .++.|.||++.
T Consensus 109 ~~V~~~~~~p~~-----------~~l~s~s-----~Dg~i~vwd~~---------------------------------- 138 (410)
T 1vyh_C 109 SPVTRVIFHPVF-----------SVMVSAS-----EDATIKVWDYE---------------------------------- 138 (410)
T ss_dssp SCEEEEEECSSS-----------SEEEEEE-----SSSCEEEEETT----------------------------------
T ss_pred CcEEEEEEcCCC-----------CEEEEEe-----CCCeEEEEECC----------------------------------
Confidence 466677777764 4777777 46689999873
Q ss_pred ccCCCCCCCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEc
Q 018322 147 DEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG 226 (358)
Q Consensus 147 ~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (358)
.......+.+|.+.|++++|+|++ .+||+|+.||+|+|||+.. ..++..+.
T Consensus 139 -------~~~~~~~l~~h~~~V~~v~~~~~~-~~l~sgs~D~~i~iwd~~~---------------------~~~~~~~~ 189 (410)
T 1vyh_C 139 -------TGDFERTLKGHTDSVQDISFDHSG-KLLASCSADMTIKLWDFQG---------------------FECIRTMH 189 (410)
T ss_dssp -------TCCCCEEECCCSSCEEEEEECTTS-SEEEEEETTSCCCEEETTS---------------------SCEEECCC
T ss_pred -------CCcEEEEEeccCCcEEEEEEcCCC-CEEEEEeCCCeEEEEeCCC---------------------CceeEEEc
Confidence 111224567899999999999998 7999999999999999976 46677788
Q ss_pred CCCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEEC
Q 018322 227 GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDT 306 (358)
Q Consensus 227 ~h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~ 306 (358)
+|...|.+++|+|++. +|++|+.|++|++||++++. .. ..+.+|...|.+++|+|++. +|++|+.|++|++||+
T Consensus 190 ~h~~~V~~v~~~p~~~-~l~s~s~D~~i~~wd~~~~~-~~---~~~~~h~~~v~~~~~~~~g~-~l~s~s~D~~v~vwd~ 263 (410)
T 1vyh_C 190 GHDHNVSSVSIMPNGD-HIVSASRDKTIKMWEVQTGY-CV---KTFTGHREWVRMVRPNQDGT-LIASCSNDQTVRVWVV 263 (410)
T ss_dssp CCSSCEEEEEECSSSS-EEEEEETTSEEEEEETTTCC-EE---EEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEET
T ss_pred CCCCCEEEEEEeCCCC-EEEEEeCCCeEEEEECCCCc-EE---EEEeCCCccEEEEEECCCCC-EEEEEcCCCeEEEEEC
Confidence 9999999999999998 99999999999999998743 22 56889999999999999998 9999999999999999
Q ss_pred CCCCCeeEEEecCCCCeEEEEEeCCC-------------------CcEEEEEeCCCCEEEEeCCCCC
Q 018322 307 RVGKSALTSFKAHNADVNVISWNRLA-------------------SCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 307 r~~~~~~~~~~~h~~~V~~i~~~p~~-------------------~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
+++ .+...+..|...|++++|+|++ ..+|++|+.||+|++||+++++
T Consensus 264 ~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~ 329 (410)
T 1vyh_C 264 ATK-ECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM 329 (410)
T ss_dssp TTC-CEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTE
T ss_pred CCC-ceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCc
Confidence 985 5777889999999999999962 2689999999999999998764
No 13
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.96 E-value=5.4e-28 Score=222.75 Aligned_cols=173 Identities=20% Similarity=0.328 Sum_probs=138.9
Q ss_pred CCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCC
Q 018322 164 HQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTG 243 (358)
Q Consensus 164 H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~ 243 (358)
|.+.|++++|+|++ .+||+|+.|++|+||++....... ....++..+.+|...|++++|+|++.
T Consensus 57 h~~~v~~v~~sp~~-~~las~s~D~~v~iw~~~~~~~~~--------------~~~~~~~~~~~h~~~V~~v~~sp~g~- 120 (330)
T 2hes_X 57 HKKAIRSVAWRPHT-SLLAAGSFDSTVSIWAKEESADRT--------------FEMDLLAIIEGHENEVKGVAWSNDGY- 120 (330)
T ss_dssp CCSCEEEEEECTTS-SEEEEEETTSCEEEEEC---------------------CCCEEEEEEC----CEEEEEECTTSC-
T ss_pred ccCCEEEEEECCCC-CEEEEEeCCCcEEEEEcccCcCcc--------------ccceeEEEEcCCCCcEEEEEECCCCC-
Confidence 99999999999998 799999999999999986421000 01345667889999999999999998
Q ss_pred eEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCC-CeeEEEecCCCC
Q 018322 244 RLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGK-SALTSFKAHNAD 322 (358)
Q Consensus 244 ~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~-~~~~~~~~h~~~ 322 (358)
+|++|+.|++|++||++..+........+.+|...|.+++|+|++. +|++|+.|++|+|||++.+. .++..+.+|...
T Consensus 121 ~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~ 199 (330)
T 2hes_X 121 YLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEA-LLASSSYDDTVRIWKDYDDDWECVAVLNGHEGT 199 (330)
T ss_dssp EEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSS-EEEEEETTSCEEEEEEETTEEEEEEEECCCSSC
T ss_pred EEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCC-EEEEEcCCCeEEEEECCCCCeeEEEEccCCCCc
Confidence 9999999999999999643322112345778999999999999998 99999999999999998642 367778899999
Q ss_pred eEEEEEeCCC-CcEEEEEeCCCCEEEEeCCCC
Q 018322 323 VNVISWNRLA-SCLLASGSDDGTFSIHDLRLL 353 (358)
Q Consensus 323 V~~i~~~p~~-~~~lasgs~Dg~i~iwDlr~~ 353 (358)
|++++|+|++ ..+|++|+.|++|+|||++..
T Consensus 200 v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~ 231 (330)
T 2hes_X 200 VWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGD 231 (330)
T ss_dssp EEEEEECCSSSSCEEEEEETTSCEEEEEEEEE
T ss_pred EEEEEecCCCCeeEEEEEeCCCeEEEEEecCC
Confidence 9999999983 178999999999999998653
No 14
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.96 E-value=1e-27 Score=217.56 Aligned_cols=209 Identities=20% Similarity=0.246 Sum_probs=167.2
Q ss_pred cceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 018322 68 PCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDDD 147 (358)
Q Consensus 68 P~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (358)
+..++.|-|++ .+|++|+ .++.|.||++..
T Consensus 11 ~V~~~~~s~~g-----------~~las~s-----~D~~v~iw~~~~---------------------------------- 40 (297)
T 2pm7_B 11 MIHDAVMDYYG-----------KRMATCS-----SDKTIKIFEVEG---------------------------------- 40 (297)
T ss_dssp CEEEEEECTTS-----------SEEEEEE-----TTSCEEEEEBCS----------------------------------
T ss_pred ceEEEEECCCC-----------CEEEEEe-----CCCEEEEEecCC----------------------------------
Confidence 45677777774 4788887 567899998731
Q ss_pred cCCCCCCCeEEEEEecCCCceeEEEEcCC-CCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEc
Q 018322 148 EEGGSGTPILQLRKVAHQGCVNRIRAMTQ-NPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG 226 (358)
Q Consensus 148 ~~~~~~~~~~~~~~~~H~~~V~~i~~~p~-~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (358)
....+...+.+|.+.|++++|+|. ...+||+|+.||+|+|||+... ....+..+.
T Consensus 41 -----~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~-------------------~~~~~~~~~ 96 (297)
T 2pm7_B 41 -----ETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENG-------------------RWSQIAVHA 96 (297)
T ss_dssp -----SCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSS-------------------CBCCCEEEC
T ss_pred -----CCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCC-------------------ceEEEEEee
Confidence 011223466799999999999864 2379999999999999999762 124566788
Q ss_pred CCCCCeEEEEeCCC--CCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCC------------CCEE
Q 018322 227 GHKDEGYAIDWNPI--TTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTE------------PDVF 292 (358)
Q Consensus 227 ~h~~~v~~l~~s~~--~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~------------~~~l 292 (358)
+|...|.+++|+|+ +. +|++|+.|++|++||++...... ...+.+|...|.+++|+|+. ..+|
T Consensus 97 ~h~~~v~~v~~~p~~~g~-~l~s~s~d~~v~~wd~~~~~~~~--~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l 173 (297)
T 2pm7_B 97 VHSASVNSVQWAPHEYGP-MLLVASSDGKVSVVEFKENGTTS--PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKF 173 (297)
T ss_dssp CCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEEBCSSSCBC--CEEEECCSSCEEEEEECCCC------------CCEE
T ss_pred cCCCceeEEEeCcCCCCc-EEEEEECCCcEEEEEecCCCcee--eeeeecccCccceEeecCCcccccccCCCCCCcceE
Confidence 99999999999997 65 99999999999999998743321 24567899999999999973 2389
Q ss_pred EEEECCCcEEEEECCCCCC---eeEEEecCCCCeEEEEEeCCC--CcEEEEEeCCCCEEEEeCCCC
Q 018322 293 ASCSVDGHIAIWDTRVGKS---ALTSFKAHNADVNVISWNRLA--SCLLASGSDDGTFSIHDLRLL 353 (358)
Q Consensus 293 as~s~Dg~I~iwD~r~~~~---~~~~~~~h~~~V~~i~~~p~~--~~~lasgs~Dg~i~iwDlr~~ 353 (358)
++|+.|++|+|||++.+.. ....+.+|...|++++|+|++ ..+||+|+.|++|+|||+++.
T Consensus 174 ~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 174 VTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp EEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred EEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence 9999999999999987542 445678999999999999984 379999999999999999864
No 15
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.96 E-value=1e-27 Score=220.25 Aligned_cols=168 Identities=17% Similarity=0.211 Sum_probs=150.3
Q ss_pred EEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEE
Q 018322 157 LQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAID 236 (358)
Q Consensus 157 ~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 236 (358)
....+..|...+.+++|+|++ .+||+++.+|.|++|++.. ......+..|...+.+++
T Consensus 114 ~~~~~~~~~~~~~~~~~spdg-~~l~~g~~dg~v~i~~~~~---------------------~~~~~~~~~~~~~v~~~~ 171 (321)
T 3ow8_A 114 QIKSIDAGPVDAWTLAFSPDS-QYLATGTHVGKVNIFGVES---------------------GKKEYSLDTRGKFILSIA 171 (321)
T ss_dssp EEEEEECCTTCCCCEEECTTS-SEEEEECTTSEEEEEETTT---------------------CSEEEEEECSSSCEEEEE
T ss_pred EEEEEeCCCccEEEEEECCCC-CEEEEEcCCCcEEEEEcCC---------------------CceeEEecCCCceEEEEE
Confidence 345566789999999999999 7999999999999999987 456677888989999999
Q ss_pred eCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEE
Q 018322 237 WNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSF 316 (358)
Q Consensus 237 ~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~ 316 (358)
|+|++. +|++|+.||.|++||++++ ... ..+.+|...|.+++|+|++. +|++|+.|+.|+|||++.+ ..+..+
T Consensus 172 ~spdg~-~lasg~~dg~i~iwd~~~~-~~~---~~~~~h~~~v~~l~~spd~~-~l~s~s~dg~i~iwd~~~~-~~~~~~ 244 (321)
T 3ow8_A 172 YSPDGK-YLASGAIDGIINIFDIATG-KLL---HTLEGHAMPIRSLTFSPDSQ-LLVTASDDGYIKIYDVQHA-NLAGTL 244 (321)
T ss_dssp ECTTSS-EEEEEETTSCEEEEETTTT-EEE---EEECCCSSCCCEEEECTTSC-EEEEECTTSCEEEEETTTC-CEEEEE
T ss_pred ECCCCC-EEEEEcCCCeEEEEECCCC-cEE---EEEcccCCceeEEEEcCCCC-EEEEEcCCCeEEEEECCCc-ceeEEE
Confidence 999998 9999999999999999874 322 56778999999999999998 9999999999999999985 577788
Q ss_pred ecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 317 KAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 317 ~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
.+|...|++++|+|++ .+|++|+.||+|+|||+++.+
T Consensus 245 ~~h~~~v~~~~~sp~~-~~l~s~s~D~~v~iwd~~~~~ 281 (321)
T 3ow8_A 245 SGHASWVLNVAFCPDD-THFVSSSSDKSVKVWDVGTRT 281 (321)
T ss_dssp CCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTE
T ss_pred cCCCCceEEEEECCCC-CEEEEEeCCCcEEEEeCCCCE
Confidence 9999999999999999 899999999999999998754
No 16
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.96 E-value=2.1e-27 Score=217.77 Aligned_cols=207 Identities=16% Similarity=0.251 Sum_probs=171.5
Q ss_pred CcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018322 67 WPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDD 146 (358)
Q Consensus 67 wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (358)
-+..++.|.|+.. .+|+.|+ .++.|.||++..-.
T Consensus 18 ~~V~~l~~~~~~~----------~~l~s~s-----~D~~v~~W~~~~~~------------------------------- 51 (319)
T 3frx_A 18 GWVTSLATSAGQP----------NLLLSAS-----RDKTLISWKLTGDD------------------------------- 51 (319)
T ss_dssp SCEEEEEECSSCT----------TEEEEEE-----TTSEEEEEEEEEET-------------------------------
T ss_pred ceEEEEEccCCCc----------cEEEEec-----CCccEEEecCCCCC-------------------------------
Confidence 4566777877531 3777777 56799999984200
Q ss_pred ccCCCCCCCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEc
Q 018322 147 DEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG 226 (358)
Q Consensus 147 ~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (358)
. ........+.+|.+.|++++|+|++ .+|++|+.|++|+|||+.. .+.+..+.
T Consensus 52 ~-----~~~~~~~~~~~h~~~v~~~~~s~dg-~~l~s~s~D~~v~~wd~~~---------------------~~~~~~~~ 104 (319)
T 3frx_A 52 Q-----KFGVPVRSFKGHSHIVQDCTLTADG-AYALSASWDKTLRLWDVAT---------------------GETYQRFV 104 (319)
T ss_dssp T-----EEEEEEEEEECCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTT---------------------TEEEEEEE
T ss_pred c-----cccccceEEeCCcccEEEEEECCCC-CEEEEEeCCCEEEEEECCC---------------------CCeeEEEc
Confidence 0 0123335677999999999999999 7999999999999999987 56677899
Q ss_pred CCCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCC-----CEEEEEECCCcE
Q 018322 227 GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEP-----DVFASCSVDGHI 301 (358)
Q Consensus 227 ~h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~-----~~las~s~Dg~I 301 (358)
+|...|.+++|+|++. +|++|+.|++|++||++.. . ...+.+|...|.+++|+|... ..|++++.|+.|
T Consensus 105 ~h~~~v~~~~~~~~~~-~l~s~s~D~~i~vwd~~~~--~---~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i 178 (319)
T 3frx_A 105 GHKSDVMSVDIDKKAS-MIISGSRDKTIKVWTIKGQ--C---LATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMV 178 (319)
T ss_dssp CCSSCEEEEEECTTSC-EEEEEETTSCEEEEETTSC--E---EEEECCCSSCEEEEEECCC------CCEEEEEETTSCE
T ss_pred cCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCC--e---EEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEE
Confidence 9999999999999998 9999999999999999642 2 246778999999999999542 389999999999
Q ss_pred EEEECCCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 302 AIWDTRVGKSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 302 ~iwD~r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
++||++.. .....+.+|...|++++|+|++ .+|++|+.||+|+|||+++.+
T Consensus 179 ~~wd~~~~-~~~~~~~~h~~~v~~~~~sp~g-~~l~s~~~dg~i~iwd~~~~~ 229 (319)
T 3frx_A 179 KAWNLNQF-QIEADFIGHNSNINTLTASPDG-TLIASAGKDGEIMLWNLAAKK 229 (319)
T ss_dssp EEEETTTT-EEEEEECCCCSCEEEEEECTTS-SEEEEEETTCEEEEEETTTTE
T ss_pred EEEECCcc-hhheeecCCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCc
Confidence 99999984 5677788999999999999999 999999999999999998764
No 17
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.96 E-value=1.1e-27 Score=227.46 Aligned_cols=164 Identities=20% Similarity=0.388 Sum_probs=145.9
Q ss_pred EEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEe
Q 018322 158 QLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDW 237 (358)
Q Consensus 158 ~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 237 (358)
...+.+|...|+++.++|++ .+|++|+.||+|++||+.. ......+.+|...|.+++|
T Consensus 227 ~~~~~~h~~~v~~~~~~~~g-~~l~s~s~D~~v~vwd~~~---------------------~~~~~~~~~h~~~v~~~~~ 284 (410)
T 1vyh_C 227 VKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVWVVAT---------------------KECKAELREHRHVVECISW 284 (410)
T ss_dssp EEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTT---------------------CCEEEEECCCSSCEEEEEE
T ss_pred EEEEeCCCccEEEEEECCCC-CEEEEEcCCCeEEEEECCC---------------------CceeeEecCCCceEEEEEE
Confidence 35567899999999999998 7999999999999999987 4667788999999999999
Q ss_pred CCC--------------------CCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEEC
Q 018322 238 NPI--------------------TTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSV 297 (358)
Q Consensus 238 s~~--------------------~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~ 297 (358)
+|. +. +|++|+.|++|++||++++ ... ..+.+|...|.+++|+|++. +|++|+.
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~g~-~l~sgs~D~~i~iwd~~~~-~~~---~~~~~h~~~v~~v~~~~~g~-~l~s~s~ 358 (410)
T 1vyh_C 285 APESSYSSISEATGSETKKSGKPGP-FLLSGSRDKTIKMWDVSTG-MCL---MTLVGHDNWVRGVLFHSGGK-FILSCAD 358 (410)
T ss_dssp CCSCGGGGGGGCCSCC-------CC-EEEEEETTSEEEEEETTTT-EEE---EEEECCSSCEEEEEECSSSS-CEEEEET
T ss_pred cCcccccchhhhccccccccCCCCC-EEEEEeCCCeEEEEECCCC-ceE---EEEECCCCcEEEEEEcCCCC-EEEEEeC
Confidence 996 44 8999999999999999874 322 56788999999999999998 8999999
Q ss_pred CCcEEEEECCCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCC
Q 018322 298 DGHIAIWDTRVGKSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLR 351 (358)
Q Consensus 298 Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr 351 (358)
||.|++||++.+ .++..+.+|...|++++|+|++ .+|+||+.||+|+||++|
T Consensus 359 D~~i~vwd~~~~-~~~~~~~~h~~~v~~l~~~~~~-~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 359 DKTLRVWDYKNK-RCMKTLNAHEHFVTSLDFHKTA-PYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp TTEEEEECCTTS-CCCEEEECCSSCEEEEEECSSS-SCEEEEETTSEEEEEC--
T ss_pred CCeEEEEECCCC-ceEEEEcCCCCcEEEEEEcCCC-CEEEEEeCCCcEEEEeCC
Confidence 999999999884 5788899999999999999999 899999999999999976
No 18
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.96 E-value=4.1e-27 Score=214.39 Aligned_cols=201 Identities=17% Similarity=0.332 Sum_probs=170.7
Q ss_pred CcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018322 67 WPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDD 146 (358)
Q Consensus 67 wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (358)
-+..++.|.|++ .+|++|+ .++.|.||++.
T Consensus 24 ~~v~~~~~s~~~-----------~~l~s~~-----~dg~i~iw~~~---------------------------------- 53 (312)
T 4ery_A 24 KAVSSVKFSPNG-----------EWLASSS-----ADKLIKIWGAY---------------------------------- 53 (312)
T ss_dssp SCEEEEEECTTS-----------SEEEEEE-----TTSCEEEEETT----------------------------------
T ss_pred CcEEEEEECCCC-----------CEEEEee-----CCCeEEEEeCC----------------------------------
Confidence 466788888875 4778877 45689999762
Q ss_pred ccCCCCCCCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEc
Q 018322 147 DEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG 226 (358)
Q Consensus 147 ~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (358)
.......+.+|...|++++|+|++ .+|++++.||.|+|||+.. ...+..+.
T Consensus 54 -------~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~i~vwd~~~---------------------~~~~~~~~ 104 (312)
T 4ery_A 54 -------DGKFEKTISGHKLGISDVAWSSDS-NLLVSASDDKTLKIWDVSS---------------------GKCLKTLK 104 (312)
T ss_dssp -------TCCEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTT---------------------CCEEEEEE
T ss_pred -------CcccchhhccCCCceEEEEEcCCC-CEEEEECCCCEEEEEECCC---------------------CcEEEEEc
Confidence 222345567899999999999998 7999999999999999987 56778889
Q ss_pred CCCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEEC
Q 018322 227 GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDT 306 (358)
Q Consensus 227 ~h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~ 306 (358)
+|...|.+++|+|++. +|++|+.||.|++||+++... . ..+..|...|.+++|+|++. +|++|+.||.|++||+
T Consensus 105 ~~~~~v~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~~-~---~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~wd~ 178 (312)
T 4ery_A 105 GHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGKC-L---KTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDT 178 (312)
T ss_dssp CCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTCCE-E---EEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEET
T ss_pred CCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCCCEE-E---EEecCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEEEC
Confidence 9999999999999998 999999999999999987432 2 45778999999999999998 9999999999999999
Q ss_pred CCCCCeeEEE-ecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 307 RVGKSALTSF-KAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 307 r~~~~~~~~~-~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
+++ .++..+ ..+...++.++|+|++ .+|++|+.||.|++||+++.+
T Consensus 179 ~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~ 225 (312)
T 4ery_A 179 ASG-QCLKTLIDDDNPPVSFVKFSPNG-KYILAATLDNTLKLWDYSKGK 225 (312)
T ss_dssp TTC-CEEEEECCSSCCCEEEEEECTTS-SEEEEEETTTEEEEEETTTTE
T ss_pred CCC-ceeeEEeccCCCceEEEEECCCC-CEEEEEcCCCeEEEEECCCCc
Confidence 985 355444 5567789999999999 899999999999999998764
No 19
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.96 E-value=1.4e-27 Score=221.29 Aligned_cols=213 Identities=19% Similarity=0.277 Sum_probs=165.9
Q ss_pred cCcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018322 66 GWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (358)
Q Consensus 66 ~wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (358)
.-+..++.|.|++ .+|+.|+ .++.|.||++..
T Consensus 61 ~~~v~~~~~sp~g-----------~~l~s~s-----~D~~v~iw~~~~-------------------------------- 92 (345)
T 3fm0_A 61 QRTVRKVAWSPCG-----------NYLASAS-----FDATTCIWKKNQ-------------------------------- 92 (345)
T ss_dssp SSCEEEEEECTTS-----------SEEEEEE-----TTSCEEEEEECC--------------------------------
T ss_pred CCcEEEEEECCCC-----------CEEEEEE-----CCCcEEEEEccC--------------------------------
Confidence 3456788888874 4788887 456899998731
Q ss_pred CccCCCCCCCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEE
Q 018322 146 DDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF 225 (358)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (358)
........+.+|.+.|++++|+|++ .+||+|+.|++|+|||+.... ....+..+
T Consensus 93 -------~~~~~~~~~~~h~~~v~~v~~sp~~-~~l~s~s~D~~v~iwd~~~~~------------------~~~~~~~~ 146 (345)
T 3fm0_A 93 -------DDFECVTTLEGHENEVKSVAWAPSG-NLLATCSRDKSVWVWEVDEED------------------EYECVSVL 146 (345)
T ss_dssp -------C-EEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEEECTTS------------------CEEEEEEE
T ss_pred -------CCeEEEEEccCCCCCceEEEEeCCC-CEEEEEECCCeEEEEECCCCC------------------CeEEEEEe
Confidence 1223445677899999999999998 799999999999999997621 12345678
Q ss_pred cCCCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEE
Q 018322 226 GGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWD 305 (358)
Q Consensus 226 ~~h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD 305 (358)
.+|...|.+++|+|++. +|++|+.|++|++|+++.... . ....+.+|...|.+++|+|++. +|++|+.|++|+|||
T Consensus 147 ~~h~~~v~~~~~~p~~~-~l~s~s~d~~i~~w~~~~~~~-~-~~~~~~~h~~~v~~l~~sp~g~-~l~s~s~D~~v~iW~ 222 (345)
T 3fm0_A 147 NSHTQDVKHVVWHPSQE-LLASASYDDTVKLYREEEDDW-V-CCATLEGHESTVWSLAFDPSGQ-RLASCSDDRTVRIWR 222 (345)
T ss_dssp CCCCSCEEEEEECSSSS-CEEEEETTSCEEEEEEETTEE-E-EEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEE
T ss_pred cCcCCCeEEEEECCCCC-EEEEEeCCCcEEEEEecCCCE-E-EEEEecCCCCceEEEEECCCCC-EEEEEeCCCeEEEec
Confidence 89999999999999998 999999999999999976321 1 1245778999999999999998 999999999999998
Q ss_pred CCCCCC-------------------------------------------------------------ee-----EEEecC
Q 018322 306 TRVGKS-------------------------------------------------------------AL-----TSFKAH 319 (358)
Q Consensus 306 ~r~~~~-------------------------------------------------------------~~-----~~~~~h 319 (358)
.+.+.. +. ....+|
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h 302 (345)
T 3fm0_A 223 QYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAH 302 (345)
T ss_dssp EECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSS
T ss_pred cccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccc
Confidence 632100 00 011368
Q ss_pred CCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCCCC
Q 018322 320 NADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKVR 356 (358)
Q Consensus 320 ~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~~~ 356 (358)
...|++|+|+|+++.+||||+.||+|+||++++.+++
T Consensus 303 ~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~ 339 (345)
T 3fm0_A 303 SQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGL 339 (345)
T ss_dssp SSCEEEEEECSSSTTEEEEEETTSCEEEEEECC----
T ss_pred cCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCc
Confidence 8899999999998669999999999999999987754
No 20
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.96 E-value=4.2e-27 Score=217.58 Aligned_cols=204 Identities=19% Similarity=0.275 Sum_probs=170.8
Q ss_pred CcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018322 67 WPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDD 146 (358)
Q Consensus 67 wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (358)
-+..++.|.|++ .+|+.|+ .++.|.||++.
T Consensus 56 ~~v~~~~~s~d~-----------~~l~s~s-----~Dg~v~iWd~~---------------------------------- 85 (340)
T 1got_B 56 AKIYAMHWGTDS-----------RLLLSAS-----QDGKLIIWDSY---------------------------------- 85 (340)
T ss_dssp SCEEEEEECTTS-----------SEEEEEE-----TTTEEEEEETT----------------------------------
T ss_pred CceEEEEECCCC-----------CEEEEEe-----CCCcEEEEECC----------------------------------
Confidence 466788888874 4788887 45699999862
Q ss_pred ccCCCCCCCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEc
Q 018322 147 DEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG 226 (358)
Q Consensus 147 ~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (358)
..........|.+.|.+++|+|++ .+||+|+.|+.|+||++..... .......+.
T Consensus 86 -------~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~d~~v~iw~~~~~~~-----------------~~~~~~~~~ 140 (340)
T 1got_B 86 -------TTNKVHAIPLRSSWVMTCAYAPSG-NYVACGGLDNICSIYNLKTREG-----------------NVRVSRELA 140 (340)
T ss_dssp -------TCCEEEEEECSSSCEEEEEECTTS-SEEEEEETTCEEEEEETTTCSB-----------------SCEEEEEEE
T ss_pred -------CCCcceEeecCCccEEEEEECCCC-CEEEEEeCCCeEEEEECccCCC-----------------cceeEEEec
Confidence 112334556799999999999998 7999999999999999976211 123455688
Q ss_pred CCCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEEC
Q 018322 227 GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDT 306 (358)
Q Consensus 227 ~h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~ 306 (358)
+|...+.++.|++.+ .|++|+.|++|++||+.++ ... ..+.+|...|.+++|+|++. +|++|+.|+.|++||+
T Consensus 141 ~h~~~v~~~~~~~~~--~l~s~s~d~~i~~wd~~~~-~~~---~~~~~h~~~v~~~~~~~~~~-~l~sg~~d~~v~~wd~ 213 (340)
T 1got_B 141 GHTGYLSCCRFLDDN--QIVTSSGDTTCALWDIETG-QQT---TTFTGHTGDVMSLSLAPDTR-LFVSGACDASAKLWDV 213 (340)
T ss_dssp CCSSCEEEEEEEETT--EEEEEETTSCEEEEETTTT-EEE---EEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEET
T ss_pred CCCccEEEEEECCCC--cEEEEECCCcEEEEECCCC-cEE---EEEcCCCCceEEEEECCCCC-EEEEEeCCCcEEEEEC
Confidence 999999999999875 6999999999999999874 322 56788999999999999998 9999999999999999
Q ss_pred CCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 307 RVGKSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 307 r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
+++ .++..+.+|...|++++|+|++ .+|++|+.||+|+|||+++.+
T Consensus 214 ~~~-~~~~~~~~h~~~v~~v~~~p~~-~~l~s~s~d~~v~iwd~~~~~ 259 (340)
T 1got_B 214 REG-MCRQTFTGHESDINAICFFPNG-NAFATGSDDATCRLFDLRADQ 259 (340)
T ss_dssp TTC-SEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTE
T ss_pred CCC-eeEEEEcCCcCCEEEEEEcCCC-CEEEEEcCCCcEEEEECCCCc
Confidence 985 5778889999999999999999 999999999999999998754
No 21
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.96 E-value=1.5e-27 Score=224.05 Aligned_cols=216 Identities=21% Similarity=0.291 Sum_probs=174.3
Q ss_pred cCcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018322 66 GWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (358)
Q Consensus 66 ~wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (358)
.-+..++.|.|++ .+|+.|+ .++.|.||++.
T Consensus 66 ~~~V~~~~~sp~~-----------~~l~s~s-----~D~~v~iWd~~--------------------------------- 96 (380)
T 3iz6_a 66 SGKVYSLDWTPEK-----------NWIVSAS-----QDGRLIVWNAL--------------------------------- 96 (380)
T ss_dssp SSCEEEEEECTTS-----------SCEEEEE-----TTSEEEEEETT---------------------------------
T ss_pred ccEEEEEEEcCCC-----------CEEEEEe-----CCCeEEEEECC---------------------------------
Confidence 4567888898875 4788887 45699999862
Q ss_pred CccCCCCCCCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEE
Q 018322 146 DDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF 225 (358)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (358)
.......+..|...|.+++|+|++ .+||+|+.|+.|+||++........ .......+
T Consensus 97 --------~~~~~~~~~~h~~~v~~~~~s~~g-~~las~~~d~~v~iw~~~~~~~~~~--------------~~~~~~~~ 153 (380)
T 3iz6_a 97 --------TSQKTHAIKLHCPWVMECAFAPNG-QSVACGGLDSACSIFNLSSQADRDG--------------NMPVSRVL 153 (380)
T ss_dssp --------TTEEEEEEECCCTTCCCCEECTTS-SEEEECCSSSCCEEEECCCCSSCCC--------------SSTTCCBC
T ss_pred --------CCccceEEecCCCCEEEEEECCCC-CEEEEeeCCCcEEEEECCCCccccC--------------Cccceeec
Confidence 233445667899999999999999 7999999999999999976321100 12334567
Q ss_pred cCCCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccC-CCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEE
Q 018322 226 GGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVD-PNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIW 304 (358)
Q Consensus 226 ~~h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~-~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iw 304 (358)
.+|...+.++.|+|.+..+|++|+.|++|++||+.++...... .....+|...|.+++|++...++|++|+.|++|++|
T Consensus 154 ~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~w 233 (380)
T 3iz6_a 154 TGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLW 233 (380)
T ss_dssp CCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEE
T ss_pred cCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEE
Confidence 8999999999999987658999999999999999875432111 112257999999999988555599999999999999
Q ss_pred ECCCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 305 DTRVGKSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 305 D~r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
|++....++..+.+|...|++++|+|++ .+|+||+.||+|+|||+++++
T Consensus 234 d~~~~~~~~~~~~~h~~~v~~v~~~p~~-~~l~s~s~D~~i~lwd~~~~~ 282 (380)
T 3iz6_a 234 DLRITSRAVRTYHGHEGDINSVKFFPDG-QRFGTGSDDGTCRLFDMRTGH 282 (380)
T ss_dssp ETTTTCCCCEEECCCSSCCCEEEECTTS-SEEEEECSSSCEEEEETTTTE
T ss_pred ECCCCCcceEEECCcCCCeEEEEEecCC-CeEEEEcCCCeEEEEECCCCc
Confidence 9997566788889999999999999999 999999999999999999754
No 22
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.96 E-value=1.6e-26 Score=215.16 Aligned_cols=209 Identities=23% Similarity=0.277 Sum_probs=172.6
Q ss_pred cCcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018322 66 GWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (358)
Q Consensus 66 ~wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (358)
.-+..++.|.|++ .+|+.|+ .++.|.||+..
T Consensus 64 ~~~V~~~~~s~d~-----------~~l~s~s-----~Dg~v~vWd~~--------------------------------- 94 (354)
T 2pbi_B 64 GNKVLCMDWCKDK-----------RRIVSSS-----QDGKVIVWDSF--------------------------------- 94 (354)
T ss_dssp SSCEEEEEECTTS-----------SEEEEEE-----TTSEEEEEETT---------------------------------
T ss_pred CCeEEEEEECCCC-----------CEEEEEe-----CCCeEEEEECC---------------------------------
Confidence 4467889998875 4788887 56799999762
Q ss_pred CccCCCCCCCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEE
Q 018322 146 DDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF 225 (358)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (358)
..........|...|.+++|+|++ .++|+|+.|+.|++|++....... .......+
T Consensus 95 --------~~~~~~~~~~~~~~v~~~~~sp~g-~~lasg~~d~~i~v~~~~~~~~~~---------------~~~~~~~~ 150 (354)
T 2pbi_B 95 --------TTNKEHAVTMPCTWVMACAYAPSG-CAIACGGLDNKCSVYPLTFDKNEN---------------MAAKKKSV 150 (354)
T ss_dssp --------TCCEEEEEECSSSCCCEEEECTTS-SEEEEESTTSEEEEEECCCCTTCC---------------SGGGCEEE
T ss_pred --------CCCcceEEecCCCCEEEEEECCCC-CEEEEeeCCCCEEEEEEecccccc---------------ccccceee
Confidence 122334556789999999999999 799999999999999987521110 12345567
Q ss_pred cCCCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCC-CCEEEEEECCCcEEEE
Q 018322 226 GGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTE-PDVFASCSVDGHIAIW 304 (358)
Q Consensus 226 ~~h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~-~~~las~s~Dg~I~iw 304 (358)
.+|...|.+++|+|++. +|++|+.|++|++||+.++ ... ..+.+|...|.+++|+|.. ..+|++|+.||.|++|
T Consensus 151 ~~h~~~v~~~~~~~~~~-~l~t~s~D~~v~lwd~~~~-~~~---~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~w 225 (354)
T 2pbi_B 151 AMHTNYLSACSFTNSDM-QILTASGDGTCALWDVESG-QLL---QSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVW 225 (354)
T ss_dssp EECSSCEEEEEECSSSS-EEEEEETTSEEEEEETTTC-CEE---EEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEE
T ss_pred eccCCcEEEEEEeCCCC-EEEEEeCCCcEEEEeCCCC-eEE---EEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEE
Confidence 78999999999999998 9999999999999999874 322 5688999999999999853 2499999999999999
Q ss_pred ECCCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 305 DTRVGKSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 305 D~r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
|++++ .++..+..|...|++++|+|++ .+|++|+.|++|++||+++.+
T Consensus 226 d~~~~-~~~~~~~~h~~~v~~v~~~p~~-~~l~s~s~D~~v~lwd~~~~~ 273 (354)
T 2pbi_B 226 DMRSG-QCVQAFETHESDVNSVRYYPSG-DAFASGSDDATCRLYDLRADR 273 (354)
T ss_dssp ETTTC-CEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTE
T ss_pred ECCCC-cEEEEecCCCCCeEEEEEeCCC-CEEEEEeCCCeEEEEECCCCc
Confidence 99985 5788889999999999999999 899999999999999998753
No 23
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.95 E-value=1.3e-26 Score=211.80 Aligned_cols=220 Identities=19% Similarity=0.251 Sum_probs=171.5
Q ss_pred CcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018322 67 WPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDD 146 (358)
Q Consensus 67 wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (358)
=+..++.|.|++ .+|++|+ .++.|.||++..-
T Consensus 12 ~~v~~~~~~~~~-----------~~l~~~~-----~dg~i~iw~~~~~-------------------------------- 43 (351)
T 3f3f_A 12 DLVHDVVYDFYG-----------RHVATCS-----SDQHIKVFKLDKD-------------------------------- 43 (351)
T ss_dssp SCEEEEEECSSS-----------SEEEEEE-----TTSEEEEEEECSS--------------------------------
T ss_pred cceeEEEEcCCC-----------CEEEEee-----CCCeEEEEECCCC--------------------------------
Confidence 356788888874 4788887 4569999998410
Q ss_pred ccCCCCCCCeEEEEEecCCCceeEEEEcCC--CCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEE
Q 018322 147 DEEGGSGTPILQLRKVAHQGCVNRIRAMTQ--NPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVK 224 (358)
Q Consensus 147 ~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~--~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (358)
.....+...+.+|.+.|++++|+|. + .+|++++.||.|+|||+......... ....++..
T Consensus 44 -----~~~~~~~~~~~~~~~~v~~~~~~~~~d~-~~l~s~~~dg~v~vwd~~~~~~~~~~------------~~~~~~~~ 105 (351)
T 3f3f_A 44 -----TSNWELSDSWRAHDSSIVAIDWASPEYG-RIIASASYDKTVKLWEEDPDQEECSG------------RRWNKLCT 105 (351)
T ss_dssp -----SCCEEEEEEEECCSSCEEEEEECCGGGC-SEEEEEETTSCEEEEEECTTSCTTSS------------CSEEEEEE
T ss_pred -----CCcceecceeccCCCcEEEEEEcCCCCC-CEEEEEcCCCeEEEEecCCCcccccc------------cCcceeee
Confidence 0123445667789999999999995 5 79999999999999999763211000 01245677
Q ss_pred EcCCCCCeEEEEeCCC--CCCeEEEEeCCCcEEEEecCCCCCccc-----------------------------------
Q 018322 225 FGGHKDEGYAIDWNPI--TTGRLVTGDCNSCIYLWEPASDATWNV----------------------------------- 267 (358)
Q Consensus 225 ~~~h~~~v~~l~~s~~--~~~~l~sgs~dg~I~lwd~~~~~~~~~----------------------------------- 267 (358)
+.+|...|++++|+|+ +. +|++|+.||.|++||+++......
T Consensus 106 ~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 184 (351)
T 3f3f_A 106 LNDSKGSLYSVKFAPAHLGL-KLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEK 184 (351)
T ss_dssp ECCCSSCEEEEEECCGGGCS-EEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCE
T ss_pred ecccCCceeEEEEcCCCCCc-EEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcE
Confidence 8899999999999999 77 999999999999999876431100
Q ss_pred ---------------------CCCccccCCCcEEEEEECCCCC---CEEEEEECCCcEEEEECCCCC-------------
Q 018322 268 ---------------------DPNPFIGHSASVEDLQWSPTEP---DVFASCSVDGHIAIWDTRVGK------------- 310 (358)
Q Consensus 268 ---------------------~~~~~~~h~~~V~~v~~sp~~~---~~las~s~Dg~I~iwD~r~~~------------- 310 (358)
....+.+|...|.+++|+|++. .+|++|+.||.|++||++.+.
T Consensus 185 l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 264 (351)
T 3f3f_A 185 LAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSN 264 (351)
T ss_dssp EEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC-------------
T ss_pred EEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCccccee
Confidence 0123456899999999999982 399999999999999998631
Q ss_pred --------------------------------CeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 311 --------------------------------SALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 311 --------------------------------~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
.++..+.+|...|++++|+|++ .+|++|+.||.|+|||+.+.+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 265 MFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTG-TILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp --------------------------CCSEEEEEEEEECTTSSCEEEEEECSSS-CCEEEEETTSCEEEEEECTTS
T ss_pred ccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCC-CEEEEecCCCcEEEEecCcCc
Confidence 3455667899999999999999 899999999999999998764
No 24
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.95 E-value=1.5e-26 Score=215.27 Aligned_cols=166 Identities=17% Similarity=0.203 Sum_probs=142.7
Q ss_pred EEEEEecCCCceeEEEEcCCC-CcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEE
Q 018322 157 LQLRKVAHQGCVNRIRAMTQN-PHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAI 235 (358)
Q Consensus 157 ~~~~~~~H~~~V~~i~~~p~~-~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 235 (358)
....+.+|...|+++.|+|.. ..+|++|+.||+|++||+.. ..++..+.+|...|.++
T Consensus 188 ~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~---------------------~~~~~~~~~h~~~v~~v 246 (354)
T 2pbi_B 188 LLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRS---------------------GQCVQAFETHESDVNSV 246 (354)
T ss_dssp EEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTT---------------------CCEEEEECCCSSCEEEE
T ss_pred EEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCC---------------------CcEEEEecCCCCCeEEE
Confidence 445677899999999999853 37999999999999999987 56778899999999999
Q ss_pred EeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEE
Q 018322 236 DWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTS 315 (358)
Q Consensus 236 ~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~ 315 (358)
+|+|++. +|++|+.|++|++||++...... ......+...+.+++|+|++. +|++|+.|+.|+|||++.+ ..+..
T Consensus 247 ~~~p~~~-~l~s~s~D~~v~lwd~~~~~~~~--~~~~~~~~~~~~~~~~s~~g~-~l~~g~~d~~i~vwd~~~~-~~~~~ 321 (354)
T 2pbi_B 247 RYYPSGD-AFASGSDDATCRLYDLRADREVA--IYSKESIIFGASSVDFSLSGR-LLFAGYNDYTINVWDVLKG-SRVSI 321 (354)
T ss_dssp EECTTSS-EEEEEETTSCEEEEETTTTEEEE--EECCTTCCSCEEEEEECTTSS-EEEEEETTSCEEEEETTTC-SEEEE
T ss_pred EEeCCCC-EEEEEeCCCeEEEEECCCCcEEE--EEcCCCcccceeEEEEeCCCC-EEEEEECCCcEEEEECCCC-ceEEE
Confidence 9999998 99999999999999998743211 011122345789999999998 9999999999999999885 57778
Q ss_pred EecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEe
Q 018322 316 FKAHNADVNVISWNRLASCLLASGSDDGTFSIHD 349 (358)
Q Consensus 316 ~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwD 349 (358)
+.+|...|++++|+|++ .+|++|+.||+|+||+
T Consensus 322 l~~h~~~v~~l~~spdg-~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 322 LFGHENRVSTLRVSPDG-TAFCSGSWDHTLRVWA 354 (354)
T ss_dssp ECCCSSCEEEEEECTTS-SCEEEEETTSEEEEEC
T ss_pred EECCCCcEEEEEECCCC-CEEEEEcCCCCEEecC
Confidence 88999999999999999 8999999999999996
No 25
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.95 E-value=2.3e-27 Score=226.69 Aligned_cols=170 Identities=16% Similarity=0.175 Sum_probs=141.7
Q ss_pred EEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEE-c--CCCCCeE
Q 018322 157 LQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF-G--GHKDEGY 233 (358)
Q Consensus 157 ~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~h~~~v~ 233 (358)
......+|.+.|++|+|+|.++.+|+||+.||+|+|||+... ....+ . .+...+.
T Consensus 156 ~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~----------------------~~~~~~~~~~~~~~~~ 213 (435)
T 4e54_B 156 TFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGN----------------------ILRVFASSDTINIWFC 213 (435)
T ss_dssp EEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSC----------------------EEEEEECCSSCSCCCC
T ss_pred eEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCC----------------------ceeEEeccCCCCccEE
Confidence 335667899999999999966589999999999999999762 12222 2 2334678
Q ss_pred EEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCC--
Q 018322 234 AIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKS-- 311 (358)
Q Consensus 234 ~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~-- 311 (358)
+++|+|++. +|++|+.||.|++||++.. . ...+.+|...|.+++|+|++..+|++|+.|+.|+|||++....
T Consensus 214 ~~~~~~~~~-~l~~g~~dg~i~~wd~~~~-~----~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~ 287 (435)
T 4e54_B 214 SLDVSASSR-MVVTGDNVGNVILLNMDGK-E----LWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKA 287 (435)
T ss_dssp CEEEETTTT-EEEEECSSSBEEEEESSSC-B----CCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSS
T ss_pred EEEECCCCC-EEEEEeCCCcEeeeccCcc-e----eEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccc
Confidence 999999998 9999999999999998642 2 3567889999999999999988999999999999999998542
Q ss_pred eeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCCC
Q 018322 312 ALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKV 355 (358)
Q Consensus 312 ~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~~ 355 (358)
.+....+|...|++++|+|++ .+|++|+.||+|+|||+++++.
T Consensus 288 ~~~~~~~h~~~v~~~~~spdg-~~l~s~~~D~~i~iwd~~~~~~ 330 (435)
T 4e54_B 288 SFLYSLPHRHPVNAACFSPDG-ARLLTTDQKSEIRVYSASQWDC 330 (435)
T ss_dssp CCSBCCBCSSCEEECCBCTTS-SEEEEEESSSCEEEEESSSSSS
T ss_pred eEEEeeeccccccceeECCCC-CeeEEEcCCCEEEEEECCCCcc
Confidence 223346799999999999999 8999999999999999987653
No 26
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.95 E-value=2.2e-26 Score=209.52 Aligned_cols=171 Identities=23% Similarity=0.358 Sum_probs=154.1
Q ss_pred CCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeE
Q 018322 154 TPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGY 233 (358)
Q Consensus 154 ~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 233 (358)
...+...+.+|.+.|++++|+|++ .+||+++.||.|+||++.. ......+.+|...|.
T Consensus 12 ~~~~~~~~~gh~~~v~~~~~s~~~-~~l~s~~~dg~i~iw~~~~---------------------~~~~~~~~~h~~~v~ 69 (312)
T 4ery_A 12 NYALKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYD---------------------GKFEKTISGHKLGIS 69 (312)
T ss_dssp CCEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTT---------------------CCEEEEECCCSSCEE
T ss_pred CceeEEEEcccCCcEEEEEECCCC-CEEEEeeCCCeEEEEeCCC---------------------cccchhhccCCCceE
Confidence 446677889999999999999998 7999999999999999876 456677889999999
Q ss_pred EEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCee
Q 018322 234 AIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSAL 313 (358)
Q Consensus 234 ~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~ 313 (358)
+++|+|++. +|++|+.||.|++||+.+.. .. ..+.+|...|.+++|+|++. +|++|+.||.|++||++++ .++
T Consensus 70 ~~~~~~~~~-~l~s~~~d~~i~vwd~~~~~-~~---~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~-~~~ 142 (312)
T 4ery_A 70 DVAWSSDSN-LLVSASDDKTLKIWDVSSGK-CL---KTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTG-KCL 142 (312)
T ss_dssp EEEECTTSS-EEEEEETTSEEEEEETTTCC-EE---EEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTC-CEE
T ss_pred EEEEcCCCC-EEEEECCCCEEEEEECCCCc-EE---EEEcCCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCCC-EEE
Confidence 999999998 99999999999999998743 22 56788999999999999998 9999999999999999985 577
Q ss_pred EEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 314 TSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 314 ~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
..+..|...|++++|+|++ .+|++|+.||.|++||+++.+
T Consensus 143 ~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~wd~~~~~ 182 (312)
T 4ery_A 143 KTLPAHSDPVSAVHFNRDG-SLIVSSSYDGLCRIWDTASGQ 182 (312)
T ss_dssp EEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCC
T ss_pred EEecCCCCcEEEEEEcCCC-CEEEEEeCCCcEEEEECCCCc
Confidence 7888999999999999999 899999999999999998765
No 27
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.95 E-value=7.5e-27 Score=219.30 Aligned_cols=170 Identities=18% Similarity=0.280 Sum_probs=142.7
Q ss_pred ecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCC
Q 018322 162 VAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPIT 241 (358)
Q Consensus 162 ~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~ 241 (358)
.+|...|.++.|++.+..+|++|+.||+|+|||+.. ...++..+.+|...|++++|+|++
T Consensus 202 ~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~--------------------~~~~~~~~~~h~~~v~~v~~~p~~ 261 (380)
T 3iz6_a 202 SGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRI--------------------TSRAVRTYHGHEGDINSVKFFPDG 261 (380)
T ss_dssp SSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTT--------------------TCCCCEEECCCSSCCCEEEECTTS
T ss_pred CCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCC--------------------CCcceEEECCcCCCeEEEEEecCC
Confidence 479999999999886558999999999999999975 246778899999999999999999
Q ss_pred CCeEEEEeCCCcEEEEecCCCCCcccC---CCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEE--
Q 018322 242 TGRLVTGDCNSCIYLWEPASDATWNVD---PNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSF-- 316 (358)
Q Consensus 242 ~~~l~sgs~dg~I~lwd~~~~~~~~~~---~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~-- 316 (358)
. +|++|+.||+|++||++++...... ......+...|.+++|+|++. +|++|+.||.|++||+..+ ..+..+
T Consensus 262 ~-~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~g~~dg~i~vwd~~~~-~~~~~~~~ 338 (380)
T 3iz6_a 262 Q-RFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGR-LLFAGYSNGDCYVWDTLLA-EMVLNLGT 338 (380)
T ss_dssp S-EEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSS-EEEEECTTSCEEEEETTTC-CEEEEECC
T ss_pred C-eEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCC-EEEEEECCCCEEEEECCCC-ceEEEEec
Confidence 8 9999999999999999874321110 011122344689999999999 9999999999999999875 455555
Q ss_pred --ecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCCC
Q 018322 317 --KAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKV 355 (358)
Q Consensus 317 --~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~~ 355 (358)
.+|...|++++|+|++ .+|+||+.||+|+||++...++
T Consensus 339 ~~~~h~~~v~~l~~s~dg-~~l~sgs~D~~i~iW~~~~~~~ 378 (380)
T 3iz6_a 339 LQNSHEGRISCLGLSSDG-SALCTGSWDKNLKIWAFSGHRK 378 (380)
T ss_dssp SCSSCCCCCCEEEECSSS-SEEEEECTTSCEEEEECCSSSS
T ss_pred ccCCCCCceEEEEECCCC-CEEEEeeCCCCEEEEecCCCcc
Confidence 6799999999999999 8999999999999999987654
No 28
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.95 E-value=3.6e-26 Score=218.12 Aligned_cols=180 Identities=21% Similarity=0.327 Sum_probs=152.1
Q ss_pred EEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeC
Q 018322 159 LRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWN 238 (358)
Q Consensus 159 ~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 238 (358)
..+.+|.+.|++++|+|.+..+|++|+.||.|+||++........ ...+...+.+|...|.+++|+
T Consensus 175 ~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~--------------~~~~~~~~~~h~~~v~~v~~~ 240 (430)
T 2xyi_A 175 LRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHR--------------VIDAKNIFTGHTAVVEDVAWH 240 (430)
T ss_dssp EEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGG--------------EEECSEEECCCSSCEEEEEEC
T ss_pred EEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCc--------------eeccceeecCCCCCEeeeEEe
Confidence 456689999999999999866999999999999999987211100 123356778999999999999
Q ss_pred CCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEec
Q 018322 239 PITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKA 318 (358)
Q Consensus 239 ~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~ 318 (358)
|.+..+|++|+.||.|++||+++... ......+..|...|++++|+|++.++|++|+.||.|++||+|....++..+..
T Consensus 241 p~~~~~l~s~~~dg~i~i~d~~~~~~-~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~ 319 (430)
T 2xyi_A 241 LLHESLFGSVADDQKLMIWDTRNNNT-SKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES 319 (430)
T ss_dssp SSCTTEEEEEETTSEEEEEETTCSCS-SSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEC
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCCC-CcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeec
Confidence 96555999999999999999987531 11134566899999999999999889999999999999999986678888999
Q ss_pred CCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCC
Q 018322 319 HNADVNVISWNRLASCLLASGSDDGTFSIHDLRLL 353 (358)
Q Consensus 319 h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~ 353 (358)
|...|++++|+|++..+|++|+.||.|+|||++..
T Consensus 320 h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~ 354 (430)
T 2xyi_A 320 HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 354 (430)
T ss_dssp CSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGT
T ss_pred CCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCC
Confidence 99999999999999778999999999999999874
No 29
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.95 E-value=6e-27 Score=214.45 Aligned_cols=210 Identities=21% Similarity=0.278 Sum_probs=168.3
Q ss_pred CcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018322 67 WPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDD 146 (358)
Q Consensus 67 wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (358)
-+..++.|-|++ .+|++|+ .++.|.||++..
T Consensus 14 ~~V~~v~~s~~g-----------~~lasgs-----~D~~v~lwd~~~--------------------------------- 44 (316)
T 3bg1_A 14 DMIHDAQMDYYG-----------TRLATCS-----SDRSVKIFDVRN--------------------------------- 44 (316)
T ss_dssp CCEEEEEECGGG-----------CEEEEEE-----TTTEEEEEEEET---------------------------------
T ss_pred CeEEEeeEcCCC-----------CEEEEEe-----CCCeEEEEEecC---------------------------------
Confidence 456778887775 4788887 567999999841
Q ss_pred ccCCCCCCCeEEEEEecCCCceeEEEEcCC-CCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEE
Q 018322 147 DEEGGSGTPILQLRKVAHQGCVNRIRAMTQ-NPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF 225 (358)
Q Consensus 147 ~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~-~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (358)
....+...+.+|.+.|++++|+|. ...+||+|+.|++|+|||+... .......+
T Consensus 45 ------~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~-------------------~~~~~~~~ 99 (316)
T 3bg1_A 45 ------GGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENG-------------------TWEKSHEH 99 (316)
T ss_dssp ------TEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSS-------------------CCCEEEEE
T ss_pred ------CCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCC-------------------cceEEEEc
Confidence 122344567799999999999863 2379999999999999999761 12455678
Q ss_pred cCCCCCeEEEEeCCC--CCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCC---------------
Q 018322 226 GGHKDEGYAIDWNPI--TTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTE--------------- 288 (358)
Q Consensus 226 ~~h~~~v~~l~~s~~--~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~--------------- 288 (358)
.+|...|.+++|+|+ +. +|++|+.|++|++||++....+. ....+.+|...|.+++|+|+.
T Consensus 100 ~~h~~~V~~v~~~p~~~g~-~lasgs~D~~i~lwd~~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 177 (316)
T 3bg1_A 100 AGHDSSVNSVCWAPHDYGL-ILACGSSDGAISLLTYTGEGQWE-VKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPN 177 (316)
T ss_dssp CCCSSCCCEEEECCTTTCS-CEEEECSSSCEEEEEECSSSCEE-ECCBTTSSSSCBCCCEECCCCCC------CCSCCCC
T ss_pred cCCCCceEEEEECCCCCCc-EEEEEcCCCCEEEEecCCCCCcc-eeeeeccccCCcceEEEccccCCccccccccccCcc
Confidence 899999999999998 55 89999999999999998743331 124567899999999999973
Q ss_pred -CCEEEEEECCCcEEEEECCCCC--CeeEEEecCCCCeEEEEEeCCC---CcEEEEEeCCCCEEEEeCCC
Q 018322 289 -PDVFASCSVDGHIAIWDTRVGK--SALTSFKAHNADVNVISWNRLA---SCLLASGSDDGTFSIHDLRL 352 (358)
Q Consensus 289 -~~~las~s~Dg~I~iwD~r~~~--~~~~~~~~h~~~V~~i~~~p~~---~~~lasgs~Dg~i~iwDlr~ 352 (358)
..+|++|+.|++|+|||++... .++..+.+|...|++++|+|++ ..+||+|+.||+|+|||++.
T Consensus 178 ~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 178 YIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp CCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred ccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 1389999999999999997642 2555678999999999999985 36899999999999999986
No 30
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.95 E-value=1.6e-26 Score=209.71 Aligned_cols=172 Identities=19% Similarity=0.363 Sum_probs=145.0
Q ss_pred EEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeC
Q 018322 159 LRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWN 238 (358)
Q Consensus 159 ~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 238 (358)
..+.+|.+.|++++|+|++ .+||+|+.|++|+|||+... ...++..+.+|...|++++|+
T Consensus 3 ~~~~~h~~~V~~~~~s~~g-~~las~s~D~~v~iw~~~~~-------------------~~~~~~~l~gH~~~V~~v~~s 62 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYG-KRMATCSSDKTIKIFEVEGE-------------------THKLIDTLTGHEGPVWRVDWA 62 (297)
T ss_dssp EECCSCSSCEEEEEECTTS-SEEEEEETTSCEEEEEBCSS-------------------CBCCCEEECCCSSCEEEEEEC
T ss_pred eeccCCcCceEEEEECCCC-CEEEEEeCCCEEEEEecCCC-------------------CcEEEEEEccccCCeEEEEec
Confidence 4566899999999999999 79999999999999998751 135678899999999999998
Q ss_pred CC--CCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCC--CCCEEEEEECCCcEEEEECCCCCC-ee
Q 018322 239 PI--TTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPT--EPDVFASCSVDGHIAIWDTRVGKS-AL 313 (358)
Q Consensus 239 ~~--~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~--~~~~las~s~Dg~I~iwD~r~~~~-~~ 313 (358)
+. +. +|++|+.||+|++||+.++. +. ....+.+|...|.+++|+|+ +. +|++|+.|+.|++||++.... ..
T Consensus 63 ~~~~g~-~l~s~s~D~~v~iWd~~~~~-~~-~~~~~~~h~~~v~~v~~~p~~~g~-~l~s~s~d~~v~~wd~~~~~~~~~ 138 (297)
T 2pm7_B 63 HPKFGT-ILASCSYDGKVMIWKEENGR-WS-QIAVHAVHSASVNSVQWAPHEYGP-MLLVASSDGKVSVVEFKENGTTSP 138 (297)
T ss_dssp CGGGCS-EEEEEETTTEEEEEEBSSSC-BC-CCEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEEBCSSSCBCC
T ss_pred CCCcCC-EEEEEcCCCEEEEEEcCCCc-eE-EEEEeecCCCceeEEEeCcCCCCc-EEEEEECCCcEEEEEecCCCceee
Confidence 64 65 99999999999999997632 11 12446779999999999997 55 999999999999999987532 24
Q ss_pred EEEecCCCCeEEEEEeCCC------------CcEEEEEeCCCCEEEEeCCCCC
Q 018322 314 TSFKAHNADVNVISWNRLA------------SCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 314 ~~~~~h~~~V~~i~~~p~~------------~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
..+.+|...|++++|+|++ ..+|++|+.|++|+|||+++.+
T Consensus 139 ~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~ 191 (297)
T 2pm7_B 139 IIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDA 191 (297)
T ss_dssp EEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTT
T ss_pred eeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCC
Confidence 5678999999999999973 2699999999999999998754
No 31
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.95 E-value=3.5e-26 Score=231.09 Aligned_cols=173 Identities=21% Similarity=0.324 Sum_probs=150.9
Q ss_pred eEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEE
Q 018322 156 ILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAI 235 (358)
Q Consensus 156 ~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 235 (358)
.....+.+|.+.|++++|+|++ .+|++|+.||+|+|||+.. ...+..+.+|...|+++
T Consensus 421 ~~~~~~~~h~~~v~~v~~s~~g-~~l~sgs~Dg~v~vwd~~~---------------------~~~~~~~~~h~~~v~~~ 478 (694)
T 3dm0_A 421 VAQRRLTGHSHFVEDVVLSSDG-QFALSGSWDGELRLWDLAA---------------------GVSTRRFVGHTKDVLSV 478 (694)
T ss_dssp EEEEEEECCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTT---------------------TEEEEEEECCSSCEEEE
T ss_pred cccceecCCCCcEEEEEECCCC-CEEEEEeCCCcEEEEECCC---------------------CcceeEEeCCCCCEEEE
Confidence 4456778999999999999998 7999999999999999987 45667889999999999
Q ss_pred EeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCC-CEEEEEECCCcEEEEECCCCCCeeE
Q 018322 236 DWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEP-DVFASCSVDGHIAIWDTRVGKSALT 314 (358)
Q Consensus 236 ~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~-~~las~s~Dg~I~iwD~r~~~~~~~ 314 (358)
+|+|++. +|+||+.|++|++||+..... ........+|...|.+++|+|++. ..|++|+.|++|+|||++.. .+..
T Consensus 479 ~~s~~~~-~l~s~s~D~~i~iwd~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~-~~~~ 555 (694)
T 3dm0_A 479 AFSLDNR-QIVSASRDRTIKLWNTLGECK-YTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNC-KLRS 555 (694)
T ss_dssp EECTTSS-CEEEEETTSCEEEECTTSCEE-EEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTC-CEEE
T ss_pred EEeCCCC-EEEEEeCCCEEEEEECCCCcc-eeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCC-cEEE
Confidence 9999998 999999999999999865322 111233467999999999999862 48999999999999999984 5777
Q ss_pred EEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 315 SFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 315 ~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
.+.+|...|++++|+|++ .+|++|+.||+|+|||+++.+
T Consensus 556 ~~~~h~~~v~~v~~spdg-~~l~sg~~Dg~i~iwd~~~~~ 594 (694)
T 3dm0_A 556 TLAGHTGYVSTVAVSPDG-SLCASGGKDGVVLLWDLAEGK 594 (694)
T ss_dssp EECCCSSCEEEEEECTTS-SEEEEEETTSBCEEEETTTTE
T ss_pred EEcCCCCCEEEEEEeCCC-CEEEEEeCCCeEEEEECCCCc
Confidence 889999999999999999 999999999999999998764
No 32
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.3e-26 Score=226.54 Aligned_cols=239 Identities=10% Similarity=0.046 Sum_probs=172.1
Q ss_pred hcccccCcceeEEEEeccCCCccccCCceEEEEEeec--------------CCCCCCceEEEEEeeccCCccccCCCCCC
Q 018322 61 HAFHIGWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQ--------------AEKPSWNSIGVFKVSNISGKRRELVPNKP 126 (358)
Q Consensus 61 ~~~~~~wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~--------------~~~~~~n~i~i~~~~~l~~~~~~~~~~~~ 126 (358)
..+.+.++..+++|.|+..+..+. ...+||++|+. ++...++.|.||++..-
T Consensus 128 ~~~~~~~~V~sv~w~p~~~~~~~~--~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~------------ 193 (524)
T 2j04_B 128 FIYNVGGLVTDIAWLNIEENTDIG--KDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTS------------ 193 (524)
T ss_dssp EEEECCC--CCCSCEEECCCCSSC--SSEEEEEEEEEC------------------CEEEEEEEEETT------------
T ss_pred EEEECCCceeEEEecccCCCCccC--cCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCC------------
Confidence 355568899999999985321100 01368888874 33446778999988410
Q ss_pred CCCCCCCCCCCCCCCCCCCCccCCCCCCCeEEEEEecCCCceeEEEEcCCC-----CcEEEEEeCCCcEEEEeCCCCccc
Q 018322 127 SNDDEDVDSESSDSDEDSDDDEEGGSGTPILQLRKVAHQGCVNRIRAMTQN-----PHICASWADTGHVQVWDLRSHLNA 201 (358)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~-----~~~lat~s~dg~V~iwd~~~~~~~ 201 (358)
.....+...+..|.+.|++++|+|.+ ..+||+++.||+|+|||+......
T Consensus 194 -------------------------~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~ 248 (524)
T 2j04_B 194 -------------------------TLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATD 248 (524)
T ss_dssp -------------------------TCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSS
T ss_pred -------------------------CCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccc
Confidence 00122234456688999999999972 369999999999999999763211
Q ss_pred cccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEE
Q 018322 202 LAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVED 281 (358)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~ 281 (358)
.... . ....+...+.+|...|++++|++. . +|++|+.||+|++||++++... ...+.+|...|.+
T Consensus 249 ~~~~--~--------~~~~p~~~l~~h~~~v~sv~~s~~-~-~lasgs~DgtV~lWD~~~~~~~---~~~~~~H~~~V~s 313 (524)
T 2j04_B 249 VHVF--K--------MCEKPSLTLSLADSLITTFDFLSP-T-TVVCGFKNGFVAEFDLTDPEVP---SFYDQVHDSYILS 313 (524)
T ss_dssp SSEE--E--------CCCSCSEEECCTTTCEEEEEESSS-S-EEEEEETTSEEEEEETTBCSSC---SEEEECSSSCEEE
T ss_pred cccc--e--------eecCceEEEEcCCCCEEEEEecCC-C-eEEEEeCCCEEEEEECCCCCCc---eEEeecccccEEE
Confidence 0000 0 013466788999999999999985 3 8999999999999999864322 2457789999999
Q ss_pred E--EECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEecCCC--CeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCCC
Q 018322 282 L--QWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNA--DVNVISWNRLASCLLASGSDDGTFSIHDLRLLKV 355 (358)
Q Consensus 282 v--~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~--~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~~ 355 (358)
| +|+|++..+||||+.|++|+|||++++ .++..+.+|.. .|++++|+|++ ..|++++.|++|+|||++++..
T Consensus 314 v~~~~s~~g~~~laS~S~D~tvklWD~~~~-~~~~~~~~~~~~~~v~~v~fsp~~-~~l~s~~~d~tv~lwd~~~~~~ 389 (524)
T 2j04_B 314 VSTAYSDFEDTVVSTVAVDGYFYIFNPKDI-ATTKTTVSRFRGSNLVPVVYCPQI-YSYIYSDGASSLRAVPSRAAFA 389 (524)
T ss_dssp EEEECCTTSCCEEEEEETTSEEEEECGGGH-HHHCEEEEECSCCSCCCEEEETTT-TEEEEECSSSEEEEEETTCTTC
T ss_pred EEEEcCCCCCeEEEEeccCCeEEEEECCCC-CcccccccccccCcccceEeCCCc-CeEEEeCCCCcEEEEECccccc
Confidence 9 578877349999999999999999984 45555656653 58899999998 7899999999999999998653
No 33
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.95 E-value=1.5e-26 Score=212.06 Aligned_cols=177 Identities=18% Similarity=0.273 Sum_probs=152.1
Q ss_pred CCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeE
Q 018322 154 TPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGY 233 (358)
Q Consensus 154 ~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 233 (358)
...+..++.+|.+.|++++|+|.++.+|+||+.|++|++|++...... ...++..+.+|...|.
T Consensus 6 ~~~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~----------------~~~~~~~~~~h~~~v~ 69 (319)
T 3frx_A 6 VLVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQK----------------FGVPVRSFKGHSHIVQ 69 (319)
T ss_dssp EEEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTE----------------EEEEEEEEECCSSCEE
T ss_pred EEEEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCcc----------------ccccceEEeCCcccEE
Confidence 345557788999999999999987789999999999999998652111 1245678899999999
Q ss_pred EEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCee
Q 018322 234 AIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSAL 313 (358)
Q Consensus 234 ~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~ 313 (358)
+++|+|++. +|++|+.|++|++||+.++. . ...+.+|...|.+++|+|++. +|++|+.|++|++||++. .++
T Consensus 70 ~~~~s~dg~-~l~s~s~D~~v~~wd~~~~~-~---~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~vwd~~~--~~~ 141 (319)
T 3frx_A 70 DCTLTADGA-YALSASWDKTLRLWDVATGE-T---YQRFVGHKSDVMSVDIDKKAS-MIISGSRDKTIKVWTIKG--QCL 141 (319)
T ss_dssp EEEECTTSS-EEEEEETTSEEEEEETTTTE-E---EEEEECCSSCEEEEEECTTSC-EEEEEETTSCEEEEETTS--CEE
T ss_pred EEEECCCCC-EEEEEeCCCEEEEEECCCCC-e---eEEEccCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCC--CeE
Confidence 999999998 99999999999999998743 2 256889999999999999998 999999999999999985 577
Q ss_pred EEEecCCCCeEEEEEeCCC-----CcEEEEEeCCCCEEEEeCCCCC
Q 018322 314 TSFKAHNADVNVISWNRLA-----SCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 314 ~~~~~h~~~V~~i~~~p~~-----~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
..+.+|...|.+++|+|.. ..+|++|+.|+.|++||+++.+
T Consensus 142 ~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~ 187 (319)
T 3frx_A 142 ATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ 187 (319)
T ss_dssp EEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTE
T ss_pred EEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcch
Confidence 7888999999999999854 2489999999999999998754
No 34
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.95 E-value=2.1e-26 Score=212.14 Aligned_cols=214 Identities=15% Similarity=0.179 Sum_probs=161.1
Q ss_pred cCcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018322 66 GWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (358)
Q Consensus 66 ~wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (358)
.-+..++.|.|++ .+|++|+ .++.|.||++..-.
T Consensus 58 ~~~v~~v~~sp~~-----------~~las~s-----~D~~v~iw~~~~~~------------------------------ 91 (330)
T 2hes_X 58 KKAIRSVAWRPHT-----------SLLAAGS-----FDSTVSIWAKEESA------------------------------ 91 (330)
T ss_dssp CSCEEEEEECTTS-----------SEEEEEE-----TTSCEEEEEC----------------------------------
T ss_pred cCCEEEEEECCCC-----------CEEEEEe-----CCCcEEEEEcccCc------------------------------
Confidence 3466788888874 4788887 45689999873100
Q ss_pred CccCCCCCCCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEE
Q 018322 146 DDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF 225 (358)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (358)
... ........+.+|.+.|++++|+|++ .+||+|+.|++|+|||+..... ...++..+
T Consensus 92 ~~~----~~~~~~~~~~~h~~~V~~v~~sp~g-~~las~s~D~~v~iwd~~~~~~-----------------~~~~~~~~ 149 (330)
T 2hes_X 92 DRT----FEMDLLAIIEGHENEVKGVAWSNDG-YYLATCSRDKSVWIWETDESGE-----------------EYECISVL 149 (330)
T ss_dssp -------CCCEEEEEEC----CEEEEEECTTS-CEEEEEETTSCEEEEECCTTCC-----------------CCEEEEEE
T ss_pred Ccc----ccceeEEEEcCCCCcEEEEEECCCC-CEEEEEeCCCEEEEEeccCCCC-----------------CeEEEEEe
Confidence 000 0233445677899999999999998 7999999999999999954110 12456678
Q ss_pred cCCCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCC--CCCEEEEEECCCcEEE
Q 018322 226 GGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPT--EPDVFASCSVDGHIAI 303 (358)
Q Consensus 226 ~~h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~--~~~~las~s~Dg~I~i 303 (358)
.+|...|.+++|+|++. +|++|+.|++|++||+...... ....+.+|...|.+++|+|+ +. .|++|+.|++|+|
T Consensus 150 ~~h~~~v~~v~~~p~~~-~l~s~s~D~~i~iW~~~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~-~l~s~s~D~~v~i 225 (330)
T 2hes_X 150 QEHSQDVKHVIWHPSEA-LLASSSYDDTVRIWKDYDDDWE--CVAVLNGHEGTVWSSDFDKTEGVF-RLCSGSDDSTVRV 225 (330)
T ss_dssp CCCSSCEEEEEECSSSS-EEEEEETTSCEEEEEEETTEEE--EEEEECCCSSCEEEEEECCSSSSC-EEEEEETTSCEEE
T ss_pred ccCCCceEEEEECCCCC-EEEEEcCCCeEEEEECCCCCee--EEEEccCCCCcEEEEEecCCCCee-EEEEEeCCCeEEE
Confidence 89999999999999998 9999999999999998753211 12567889999999999998 44 8999999999999
Q ss_pred EECCCCC-------CeeEEEec-CCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCC
Q 018322 304 WDTRVGK-------SALTSFKA-HNADVNVISWNRLASCLLASGSDDGTFSIHDLRLL 353 (358)
Q Consensus 304 wD~r~~~-------~~~~~~~~-h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~ 353 (358)
||++.+. .+...+.. |...|++++|++++ +|++|+.||.|+|||+++.
T Consensus 226 w~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~--~l~s~~~dg~v~iw~~~~~ 281 (330)
T 2hes_X 226 WKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG--LIASVGADGVLAVYEEVDG 281 (330)
T ss_dssp EEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS--CEEEEETTSCEEEEEEETT
T ss_pred EEecCCCccccceeEEeeecccccccceEEEEEcCCC--EEEEEeCCCEEEEEEcCCC
Confidence 9997532 12333433 89999999999755 7999999999999998654
No 35
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.95 E-value=2.6e-27 Score=220.89 Aligned_cols=210 Identities=12% Similarity=0.169 Sum_probs=162.4
Q ss_pred CcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018322 67 WPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDD 146 (358)
Q Consensus 67 wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (358)
-|..++.|.|++ .+|++|+ .++.|.||++..
T Consensus 12 ~~v~~~~~s~~g-----------~~l~~~~-----~d~~i~iw~~~~--------------------------------- 42 (377)
T 3dwl_C 12 KPSYEHAFNSQR-----------TEFVTTT-----ATNQVELYEQDG--------------------------------- 42 (377)
T ss_dssp SCCSCCEECSSS-----------SEEECCC-----SSSCBCEEEEET---------------------------------
T ss_pred CcEEEEEECCCC-----------CEEEEec-----CCCEEEEEEccC---------------------------------
Confidence 367788888875 4777776 456899999841
Q ss_pred ccCCCCCCCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEc
Q 018322 147 DEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG 226 (358)
Q Consensus 147 ~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (358)
..+.....+.+|.+.|++++|+|++ .+|++++.||+|+|||+.... ...+...+.
T Consensus 43 ------~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~d~~v~vwd~~~~~------------------~~~~~~~~~ 97 (377)
T 3dwl_C 43 ------NGWKHARTFSDHDKIVTCVDWAPKS-NRIVTCSQDRNAYVYEKRPDG------------------TWKQTLVLL 97 (377)
T ss_dssp ------TEEEECCCBCCCSSCEEEEEECTTT-CCEEEEETTSSEEEC------------------------CCCCEEECC
T ss_pred ------CceEEEEEEecCCceEEEEEEeCCC-CEEEEEeCCCeEEEEEcCCCC------------------ceeeeeEec
Confidence 0112334556899999999999998 789999999999999998721 024667788
Q ss_pred CCCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCcccc-CCCcEEEEEECCCCCCEEEEEECCCcEEEEE
Q 018322 227 GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIG-HSASVEDLQWSPTEPDVFASCSVDGHIAIWD 305 (358)
Q Consensus 227 ~h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~-h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD 305 (358)
+|...|++++|+|++. +|++|+.|+.|++||++....+. ....+.+ |...|.+++|+|++. +|++|+.|+.|++||
T Consensus 98 ~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd 174 (377)
T 3dwl_C 98 RLNRAATFVRWSPNED-KFAVGSGARVISVCYFEQENDWW-VSKHLKRPLRSTILSLDWHPNNV-LLAAGCADRKAYVLS 174 (377)
T ss_dssp CCSSCEEEEECCTTSS-CCEEEESSSCEEECCC-----CC-CCEEECSSCCSCEEEEEECTTSS-EEEEEESSSCEEEEE
T ss_pred ccCCceEEEEECCCCC-EEEEEecCCeEEEEEECCcccce-eeeEeecccCCCeEEEEEcCCCC-EEEEEeCCCEEEEEE
Confidence 9999999999999998 99999999999999998754321 1245566 999999999999998 999999999999999
Q ss_pred CCCC-----------------CCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCCC
Q 018322 306 TRVG-----------------KSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKV 355 (358)
Q Consensus 306 ~r~~-----------------~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~~ 355 (358)
++.. ..++..+ .|...|++++|+|++ .+|++|+.||.|+|||+++.+.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~-~~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 175 AYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSG-NALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp ECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTS-SCEEEEETTTEEC-CEECSTTS
T ss_pred EEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCC-CEEEEEeCCCcEEEEECCCCCC
Confidence 8631 1234444 899999999999999 8999999999999999998765
No 36
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.95 E-value=8.4e-27 Score=218.01 Aligned_cols=167 Identities=15% Similarity=0.074 Sum_probs=135.1
Q ss_pred ecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCC
Q 018322 162 VAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPIT 241 (358)
Q Consensus 162 ~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~ 241 (358)
+.|.+.|++|.|+|++ .++++++.++ +++|+.... .........+|...+.+++|+|++
T Consensus 173 ~~~~~~V~~v~fspdg-~~l~s~s~~~-~~~~~~~~~-------------------~~~~~~~~~~~~~~v~~v~fspdg 231 (365)
T 4h5i_A 173 IETRGEVKDLHFSTDG-KVVAYITGSS-LEVISTVTG-------------------SCIARKTDFDKNWSLSKINFIADD 231 (365)
T ss_dssp EECSSCCCEEEECTTS-SEEEEECSSC-EEEEETTTC-------------------CEEEEECCCCTTEEEEEEEEEETT
T ss_pred eCCCCceEEEEEccCC-ceEEecccee-EEEEEeccC-------------------cceeeeecCCCCCCEEEEEEcCCC
Confidence 4588999999999999 7899988655 555655441 011122345688899999999999
Q ss_pred CCeEEEEeCCC----cEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEE-
Q 018322 242 TGRLVTGDCNS----CIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSF- 316 (358)
Q Consensus 242 ~~~l~sgs~dg----~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~- 316 (358)
. ++++++.++ .+++|++............+.+|...|++++|+|++. +||+|+.|++|+|||++++ +++..+
T Consensus 232 ~-~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~-~lasgs~D~~V~iwd~~~~-~~~~~~~ 308 (365)
T 4h5i_A 232 T-VLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGE-LAVLASNDNSIALVKLKDL-SMSKIFK 308 (365)
T ss_dssp E-EEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSC-EEEEEETTSCEEEEETTTT-EEEEEET
T ss_pred C-EEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCC-ceEEEcCCCEEEEEECCCC-cEEEEec
Confidence 8 999998887 6888998764332222345678999999999999999 9999999999999999985 566665
Q ss_pred ecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCC
Q 018322 317 KAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLL 353 (358)
Q Consensus 317 ~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~ 353 (358)
.+|...|++|+|+|++ .+|||||.|++|+|||+...
T Consensus 309 ~gH~~~V~~v~fSpdg-~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 309 QAHSFAITEVTISPDS-TYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp TSSSSCEEEEEECTTS-CEEEEEETTSEEEEEECCTT
T ss_pred CcccCCEEEEEECCCC-CEEEEEeCCCeEEEEEcCCC
Confidence 7899999999999999 99999999999999999643
No 37
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=8.5e-26 Score=209.68 Aligned_cols=209 Identities=20% Similarity=0.250 Sum_probs=171.3
Q ss_pred cCcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018322 66 GWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (358)
Q Consensus 66 ~wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (358)
.-+..++.|.|++ .+|++|+ .++.|.||++..
T Consensus 11 ~~~v~~~~~s~~~-----------~~l~~~~-----~dg~i~iw~~~~-------------------------------- 42 (379)
T 3jrp_A 11 NELIHDAVLDYYG-----------KRLATCS-----SDKTIKIFEVEG-------------------------------- 42 (379)
T ss_dssp CCCEEEEEECSSS-----------SEEEEEE-----TTSCEEEEEEET--------------------------------
T ss_pred cccEEEEEEcCCC-----------CEEEEEE-----CCCcEEEEecCC--------------------------------
Confidence 3466788888875 4788887 456899999841
Q ss_pred CccCCCCCCCeEEEEEecCCCceeEEEEcCC--CCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcE
Q 018322 146 DDEEGGSGTPILQLRKVAHQGCVNRIRAMTQ--NPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLV 223 (358)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~--~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (358)
........+.+|.+.|++++|++. + .+|++++.||.|+|||+... ....+.
T Consensus 43 -------~~~~~~~~~~~h~~~v~~~~~~~~~~~-~~l~s~~~dg~v~iwd~~~~-------------------~~~~~~ 95 (379)
T 3jrp_A 43 -------ETHKLIDTLTGHEGPVWRVDWAHPKFG-TILASCSYDGKVLIWKEENG-------------------RWSQIA 95 (379)
T ss_dssp -------TEEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTSCEEEEEEETT-------------------EEEEEE
T ss_pred -------CcceeeeEecCCCCcEEEEEeCCCCCC-CEEEEeccCCEEEEEEcCCC-------------------ceeEee
Confidence 133444567789999999999876 5 79999999999999999762 112567
Q ss_pred EEcCCCCCeEEEEeCCC--CCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCC-------------C
Q 018322 224 KFGGHKDEGYAIDWNPI--TTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPT-------------E 288 (358)
Q Consensus 224 ~~~~h~~~v~~l~~s~~--~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~-------------~ 288 (358)
.+.+|...|++++|+|+ +. +|++|+.||.|++||++...... ...+.+|...|.+++|+|. +
T Consensus 96 ~~~~~~~~v~~~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 172 (379)
T 3jrp_A 96 VHAVHSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENGTTS--PIIIDAHAIGVNSASWAPATIEEDGEHNGTKES 172 (379)
T ss_dssp EECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCTTSCCC--EEEEECCTTCEEEEEECCCC----------CTT
T ss_pred eecCCCcceEEEEeCCCCCCC-EEEEecCCCcEEEEecCCCCcee--eEEecCCCCceEEEEEcCccccccccccCCCCC
Confidence 78889999999999999 76 99999999999999998753322 2346679999999999994 6
Q ss_pred CCEEEEEECCCcEEEEECCCCCC---eeEEEecCCCCeEEEEEeCC---CCcEEEEEeCCCCEEEEeCCCCC
Q 018322 289 PDVFASCSVDGHIAIWDTRVGKS---ALTSFKAHNADVNVISWNRL---ASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 289 ~~~las~s~Dg~I~iwD~r~~~~---~~~~~~~h~~~V~~i~~~p~---~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
. +|++|+.||.|++||++.+.. +...+..|...|++++|+|+ + .+|++|+.||.|+|||+++..
T Consensus 173 ~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~-~~l~s~~~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 173 R-KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLR-SYLASVSQDRTCIIWTQDNEQ 242 (379)
T ss_dssp C-EEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSS-EEEEEEETTSCEEEEEESSTT
T ss_pred C-EEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCC-CeEEEEeCCCEEEEEeCCCCC
Confidence 6 999999999999999987543 34566789999999999999 6 999999999999999999864
No 38
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.95 E-value=1.7e-25 Score=210.90 Aligned_cols=173 Identities=15% Similarity=0.236 Sum_probs=140.3
Q ss_pred eEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEE
Q 018322 156 ILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAI 235 (358)
Q Consensus 156 ~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 235 (358)
.....+.+|.+.|++++|+|++ .+|++++.|++|+|||+.. ......+. +...+.++
T Consensus 156 ~~~~~~~~h~~~v~~~~~~p~~-~~l~s~s~d~~v~iwd~~~---------------------~~~~~~~~-~~~~v~~~ 212 (393)
T 1erj_A 156 KIVMILQGHEQDIYSLDYFPSG-DKLVSGSGDRTVRIWDLRT---------------------GQCSLTLS-IEDGVTTV 212 (393)
T ss_dssp EEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTT---------------------TEEEEEEE-CSSCEEEE
T ss_pred cEEEEEccCCCCEEEEEEcCCC-CEEEEecCCCcEEEEECCC---------------------CeeEEEEE-cCCCcEEE
Confidence 3445677899999999999999 7899999999999999986 33444443 55689999
Q ss_pred EeCC-CCCCeEEEEeCCCcEEEEecCCCCCccc---CCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCC-
Q 018322 236 DWNP-ITTGRLVTGDCNSCIYLWEPASDATWNV---DPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGK- 310 (358)
Q Consensus 236 ~~s~-~~~~~l~sgs~dg~I~lwd~~~~~~~~~---~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~- 310 (358)
+|+| ++. +|++|+.||.|++||++++..... ......+|...|.+++|+|++. +|++|+.|+.|++||++...
T Consensus 213 ~~~~~~~~-~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~-~l~s~s~d~~v~~wd~~~~~~ 290 (393)
T 1erj_A 213 AVSPGDGK-YIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQ-SVVSGSLDRSVKLWNLQNANN 290 (393)
T ss_dssp EECSTTCC-EEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSS-EEEEEETTSEEEEEEC-----
T ss_pred EEECCCCC-EEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCC-EEEEEeCCCEEEEEECCCCCC
Confidence 9999 666 999999999999999987432110 0112357999999999999998 99999999999999998632
Q ss_pred ----------CeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 311 ----------SALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 311 ----------~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
.+...+.+|...|.+++|+|++ .+|++|+.||.|++||+++++
T Consensus 291 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~sgs~D~~v~iwd~~~~~ 343 (393)
T 1erj_A 291 KSDSKTPNSGTCEVTYIGHKDFVLSVATTQND-EYILSGSKDRGVLFWDKKSGN 343 (393)
T ss_dssp ----------CEEEEEECCSSCEEEEEECGGG-CEEEEEETTSEEEEEETTTCC
T ss_pred cccccCCCCCcceEEEecccCcEEEEEECCCC-CEEEEEeCCCeEEEEECCCCe
Confidence 2455678899999999999999 899999999999999998765
No 39
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.94 E-value=1.6e-25 Score=211.23 Aligned_cols=161 Identities=19% Similarity=0.391 Sum_probs=136.0
Q ss_pred cCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCC
Q 018322 163 AHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITT 242 (358)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~ 242 (358)
.+...|++++|+|++ .+||+|+.||+|+|||+.. .+.+..+.+|...|++++|+|++.
T Consensus 121 ~~~~~v~~v~~s~dg-~~l~s~~~d~~i~iwd~~~---------------------~~~~~~~~~h~~~v~~~~~~p~~~ 178 (393)
T 1erj_A 121 SSDLYIRSVCFSPDG-KFLATGAEDRLIRIWDIEN---------------------RKIVMILQGHEQDIYSLDYFPSGD 178 (393)
T ss_dssp CCCCBEEEEEECTTS-SEEEEEETTSCEEEEETTT---------------------TEEEEEECCCSSCEEEEEECTTSS
T ss_pred CCceeEEEEEECCCC-CEEEEEcCCCeEEEEECCC---------------------CcEEEEEccCCCCEEEEEEcCCCC
Confidence 455679999999999 7999999999999999986 466778899999999999999998
Q ss_pred CeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECC-CCCCEEEEEECCCcEEEEECCCCCCeeEEE-----
Q 018322 243 GRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSP-TEPDVFASCSVDGHIAIWDTRVGKSALTSF----- 316 (358)
Q Consensus 243 ~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp-~~~~~las~s~Dg~I~iwD~r~~~~~~~~~----- 316 (358)
+|++|+.|++|++||++++.. . .. ..+...+.+++|+| ++. +|++|+.||.|++||++++ ..+..+
T Consensus 179 -~l~s~s~d~~v~iwd~~~~~~-~---~~-~~~~~~v~~~~~~~~~~~-~l~~~s~d~~v~iwd~~~~-~~~~~~~~~~~ 250 (393)
T 1erj_A 179 -KLVSGSGDRTVRIWDLRTGQC-S---LT-LSIEDGVTTVAVSPGDGK-YIAAGSLDRAVRVWDSETG-FLVERLDSENE 250 (393)
T ss_dssp -EEEEEETTSEEEEEETTTTEE-E---EE-EECSSCEEEEEECSTTCC-EEEEEETTSCEEEEETTTC-CEEEEEC----
T ss_pred -EEEEecCCCcEEEEECCCCee-E---EE-EEcCCCcEEEEEECCCCC-EEEEEcCCCcEEEEECCCC-cEEEeeccccc
Confidence 999999999999999987422 2 12 23567899999999 555 9999999999999999985 344444
Q ss_pred --ecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 317 --KAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 317 --~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
.+|...|++++|+|++ .+|++|+.||+|++||+++..
T Consensus 251 ~~~~h~~~v~~v~~~~~g-~~l~s~s~d~~v~~wd~~~~~ 289 (393)
T 1erj_A 251 SGTGHKDSVYSVVFTRDG-QSVVSGSLDRSVKLWNLQNAN 289 (393)
T ss_dssp --CCCSSCEEEEEECTTS-SEEEEEETTSEEEEEEC----
T ss_pred CCCCCCCCEEEEEECCCC-CEEEEEeCCCEEEEEECCCCC
Confidence 5789999999999999 999999999999999998643
No 40
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.94 E-value=2e-25 Score=211.04 Aligned_cols=174 Identities=14% Similarity=0.196 Sum_probs=142.4
Q ss_pred EEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEE
Q 018322 157 LQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAID 236 (358)
Q Consensus 157 ~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 236 (358)
....+.+|.+.|++++|+|++ .+|++++.||+|++||+.. ...+..+.+|...|++++
T Consensus 131 ~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~d~~i~iwd~~~---------------------~~~~~~~~~h~~~v~~~~ 188 (420)
T 3vl1_A 131 QREIDQAHVSEITKLKFFPSG-EALISSSQDMQLKIWSVKD---------------------GSNPRTLIGHRATVTDIA 188 (420)
T ss_dssp EEEETTSSSSCEEEEEECTTS-SEEEEEETTSEEEEEETTT---------------------CCCCEEEECCSSCEEEEE
T ss_pred eeeecccccCccEEEEECCCC-CEEEEEeCCCeEEEEeCCC---------------------CcCceEEcCCCCcEEEEE
Confidence 334446899999999999998 7999999999999999987 466778899999999999
Q ss_pred eCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccC---------------------CCcEEEEEECCCCCCEEEEE
Q 018322 237 WNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGH---------------------SASVEDLQWSPTEPDVFASC 295 (358)
Q Consensus 237 ~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h---------------------~~~V~~v~~sp~~~~~las~ 295 (358)
|+|++. +|++|+.||.|++||++++.. .........| ...+.+++|+|++. +|++|
T Consensus 189 ~~~~~~-~l~s~~~d~~v~iwd~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~ 265 (420)
T 3vl1_A 189 IIDRGR-NVLSASLDGTIRLWECGTGTT-IHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGK-YVIAG 265 (420)
T ss_dssp EETTTT-EEEEEETTSCEEEEETTTTEE-EEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTE-EEEEE
T ss_pred EcCCCC-EEEEEcCCCcEEEeECCCCce-eEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCC-EEEEE
Confidence 999998 999999999999999987432 2111111123 34455566688888 99999
Q ss_pred ECCCcEEEEECCCCCCeeEEE-ecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCCCC
Q 018322 296 SVDGHIAIWDTRVGKSALTSF-KAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKVR 356 (358)
Q Consensus 296 s~Dg~I~iwD~r~~~~~~~~~-~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~~~ 356 (358)
+.||.|++||++++. .+..+ ..|...|++++|+|++..+|++|+.||.|++||+++.+.+
T Consensus 266 ~~dg~i~i~d~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~ 326 (420)
T 3vl1_A 266 HVSGVITVHNVFSKE-QTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECP 326 (420)
T ss_dssp ETTSCEEEEETTTCC-EEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSC
T ss_pred cCCCeEEEEECCCCc-eeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCc
Confidence 999999999999864 44444 5688999999999999449999999999999999987654
No 41
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.94 E-value=1.2e-25 Score=221.26 Aligned_cols=159 Identities=21% Similarity=0.358 Sum_probs=142.7
Q ss_pred EEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEe
Q 018322 158 QLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDW 237 (358)
Q Consensus 158 ~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 237 (358)
...+.+|.+.|++++|+|++ .+||+++.|++|++||+.. +.+..+.+|...|++++|
T Consensus 419 ~~~~~~~~~~v~~~~~s~d~-~~l~~~~~d~~v~~w~~~~----------------------~~~~~~~~~~~~v~~~~~ 475 (577)
T 2ymu_A 419 LQTLTGHSSSVWGVAFSPDD-QTIASASDDKTVKLWNRNG----------------------QLLQTLTGHSSSVRGVAF 475 (577)
T ss_dssp EEEEECCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTS----------------------CEEEEEECCSSCEEEEEE
T ss_pred EEEecCCCCCeEEEEECCCC-CEEEEEcCCCEEEEEECCC----------------------CEEEEEcCCCCCEEEEEE
Confidence 35667899999999999998 7999999999999999754 556778899999999999
Q ss_pred CCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEe
Q 018322 238 NPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFK 317 (358)
Q Consensus 238 s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~ 317 (358)
+|++. +|++|+.|+.|++|+.. +... ..+.+|...|++|+|+|++. +||+++.||.|+|||.. ..++..+.
T Consensus 476 spd~~-~las~~~d~~i~iw~~~--~~~~---~~~~~h~~~v~~l~~s~dg~-~l~s~~~dg~v~lwd~~--~~~~~~~~ 546 (577)
T 2ymu_A 476 SPDGQ-TIASASDDKTVKLWNRN--GQLL---QTLTGHSSSVRGVAFSPDGQ-TIASASDDKTVKLWNRN--GQLLQTLT 546 (577)
T ss_dssp CTTSC-EEEEEETTSEEEEEETT--SCEE---EEEECCSSCEEEEEECTTSS-CEEEEETTSEEEEECTT--SCEEEEEE
T ss_pred cCCCC-EEEEEeCCCEEEEEcCC--CCEE---EEEeCCCCCEEEEEEcCCCC-EEEEEECcCEEEEEeCC--CCEEEEEc
Confidence 99998 99999999999999963 3322 56889999999999999998 89999999999999964 35788899
Q ss_pred cCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEe
Q 018322 318 AHNADVNVISWNRLASCLLASGSDDGTFSIHD 349 (358)
Q Consensus 318 ~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwD 349 (358)
+|...|++++|+|++ .+|+|++.|++|++||
T Consensus 547 ~h~~~v~~~~fs~dg-~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 547 GHSSSVWGVAFSPDG-QTIASASSDKTVKLWN 577 (577)
T ss_dssp CCSSCEEEEEECTTS-SCEEEEETTSCEEEEC
T ss_pred CCCCCEEEEEEcCCC-CEEEEEeCCCEEEEeC
Confidence 999999999999999 8999999999999997
No 42
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.94 E-value=2.7e-25 Score=206.18 Aligned_cols=211 Identities=14% Similarity=0.166 Sum_probs=169.6
Q ss_pred cCcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018322 66 GWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (358)
Q Consensus 66 ~wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (358)
.-|..++.|.|++ .+|++|+ .++.|.||++..
T Consensus 8 ~~~i~~~~~s~~~-----------~~l~~~~-----~d~~v~i~~~~~-------------------------------- 39 (372)
T 1k8k_C 8 VEPISCHAWNKDR-----------TQIAICP-----NNHEVHIYEKSG-------------------------------- 39 (372)
T ss_dssp SSCCCEEEECTTS-----------SEEEEEC-----SSSEEEEEEEET--------------------------------
T ss_pred CCCeEEEEECCCC-----------CEEEEEe-----CCCEEEEEeCCC--------------------------------
Confidence 3467788888875 4777776 357999998841
Q ss_pred CccCCCCCCCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEE
Q 018322 146 DDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF 225 (358)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (358)
........+.+|.+.|++++|+|++ .+|++++.||.|++||+.... ..+...+
T Consensus 40 -------~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~-------------------~~~~~~~ 92 (372)
T 1k8k_C 40 -------NKWVQVHELKEHNGQVTGVDWAPDS-NRIVTCGTDRNAYVWTLKGRT-------------------WKPTLVI 92 (372)
T ss_dssp -------TEEEEEEEEECCSSCEEEEEEETTT-TEEEEEETTSCEEEEEEETTE-------------------EEEEEEC
T ss_pred -------CcEEeeeeecCCCCcccEEEEeCCC-CEEEEEcCCCeEEEEECCCCe-------------------eeeeEEe
Confidence 0112445666899999999999988 799999999999999996521 1223445
Q ss_pred cCCCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEE
Q 018322 226 GGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWD 305 (358)
Q Consensus 226 ~~h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD 305 (358)
..|...+.+++|+|++. +|++|+.||.|++||+.....+........+|...|.+++|+|++. +|++++.||.|++||
T Consensus 93 ~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~~~d 170 (372)
T 1k8k_C 93 LRINRAARCVRWAPNEK-KFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSV-LLAAGSCDFKCRIFS 170 (372)
T ss_dssp CCCSSCEEEEEECTTSS-EEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSS-EEEEEETTSCEEEEE
T ss_pred ecCCCceeEEEECCCCC-EEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCC-EEEEEcCCCCEEEEE
Confidence 67889999999999998 9999999999999999875432211233456899999999999988 999999999999999
Q ss_pred CCC-----------------CCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 306 TRV-----------------GKSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 306 ~r~-----------------~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
++. ...++..+..|...|++++|+|++ .+|++|+.||.|++||+++.+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~ 235 (372)
T 1k8k_C 171 AYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANG-SRVAWVSHDSTVCLADADKKM 235 (372)
T ss_dssp CCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSS-SEEEEEETTTEEEEEEGGGTT
T ss_pred cccccccccccccccccccchhhheEecCCCCCeEEEEEECCCC-CEEEEEeCCCEEEEEECCCCc
Confidence 752 134667778899999999999999 899999999999999998765
No 43
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.94 E-value=1.8e-25 Score=222.76 Aligned_cols=167 Identities=18% Similarity=0.257 Sum_probs=144.1
Q ss_pred EEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeC
Q 018322 159 LRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWN 238 (358)
Q Consensus 159 ~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 238 (358)
..+.+|.+.|++++|+|++ .+||+|+.||+|+|||+... .......+.+|...|.+++|+
T Consensus 53 ~~~~~h~~~v~~~~~spdg-~~lasg~~d~~v~lWd~~~~-------------------~~~~~~~~~~~~~~v~~v~fs 112 (611)
T 1nr0_A 53 EIYTEHSHQTTVAKTSPSG-YYCASGDVHGNVRIWDTTQT-------------------THILKTTIPVFSGPVKDISWD 112 (611)
T ss_dssp EEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEESSST-------------------TCCEEEEEECSSSCEEEEEEC
T ss_pred eEecCCCCceEEEEECCCC-cEEEEEeCCCCEEEeECCCC-------------------cceeeEeecccCCceEEEEEC
Confidence 4567899999999999999 89999999999999998641 123345788999999999999
Q ss_pred CCCCCeEEEEeCC----CcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeE
Q 018322 239 PITTGRLVTGDCN----SCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALT 314 (358)
Q Consensus 239 ~~~~~~l~sgs~d----g~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~ 314 (358)
|++. +|++++.+ +.|++||... . ...+.+|...|++++|+|++...|++|+.|++|++||.+.. .+..
T Consensus 113 ~dg~-~l~~~~~~~~~~~~v~~wd~~~---~---~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~-~~~~ 184 (611)
T 1nr0_A 113 SESK-RIAAVGEGRERFGHVFLFDTGT---S---NGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPF-KFKS 184 (611)
T ss_dssp TTSC-EEEEEECCSSCSEEEEETTTCC---B---CBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTB-EEEE
T ss_pred CCCC-EEEEEECCCCceeEEEEeeCCC---C---cceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCC-eEee
Confidence 9998 88888765 4788998532 2 25678999999999999998867999999999999998874 5677
Q ss_pred EEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 315 SFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 315 ~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
.+.+|...|++++|+|++ .+||+|+.|++|+|||+++++
T Consensus 185 ~l~~H~~~V~~v~fspdg-~~las~s~D~~i~lwd~~~g~ 223 (611)
T 1nr0_A 185 TFGEHTKFVHSVRYNPDG-SLFASTGGDGTIVLYNGVDGT 223 (611)
T ss_dssp EECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCC
T ss_pred eeccccCceEEEEECCCC-CEEEEEECCCcEEEEECCCCc
Confidence 889999999999999999 899999999999999987654
No 44
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.94 E-value=2.7e-25 Score=221.48 Aligned_cols=201 Identities=21% Similarity=0.346 Sum_probs=163.4
Q ss_pred cceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 018322 68 PCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDDD 147 (358)
Q Consensus 68 P~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (358)
+..++.|-|++ .+|+.|. .++.|.||++..
T Consensus 61 ~v~~~~~spdg-----------~~lasg~-----~d~~v~lWd~~~---------------------------------- 90 (611)
T 1nr0_A 61 QTTVAKTSPSG-----------YYCASGD-----VHGNVRIWDTTQ---------------------------------- 90 (611)
T ss_dssp CEEEEEECTTS-----------SEEEEEE-----TTSEEEEEESSS----------------------------------
T ss_pred ceEEEEECCCC-----------cEEEEEe-----CCCCEEEeECCC----------------------------------
Confidence 45566777764 5888888 456899998731
Q ss_pred cCCCCCCCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCC----CcEEEEeCCCCccccccccccccCCCCCCCCCCCcE
Q 018322 148 EEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADT----GHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLV 223 (358)
Q Consensus 148 ~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~d----g~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (358)
....+...+.+|.+.|++++|+|++ .+||+++.+ +.|++||... ...
T Consensus 91 -----~~~~~~~~~~~~~~~v~~v~fs~dg-~~l~~~~~~~~~~~~v~~wd~~~-----------------------~~~ 141 (611)
T 1nr0_A 91 -----TTHILKTTIPVFSGPVKDISWDSES-KRIAAVGEGRERFGHVFLFDTGT-----------------------SNG 141 (611)
T ss_dssp -----TTCCEEEEEECSSSCEEEEEECTTS-CEEEEEECCSSCSEEEEETTTCC-----------------------BCB
T ss_pred -----CcceeeEeecccCCceEEEEECCCC-CEEEEEECCCCceeEEEEeeCCC-----------------------Ccc
Confidence 1333445677899999999999999 577776654 4788888533 334
Q ss_pred EEcCCCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEE
Q 018322 224 KFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAI 303 (358)
Q Consensus 224 ~~~~h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~i 303 (358)
.+.+|...|++++|+|++..+|++|+.|++|++||.... .. ...+.+|...|.+++|+|++. +||+|+.|++|+|
T Consensus 142 ~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~-~~---~~~l~~H~~~V~~v~fspdg~-~las~s~D~~i~l 216 (611)
T 1nr0_A 142 NLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPF-KF---KSTFGEHTKFVHSVRYNPDGS-LFASTGGDGTIVL 216 (611)
T ss_dssp CCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTB-EE---EEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEE
T ss_pred eecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCC-eE---eeeeccccCceEEEEECCCCC-EEEEEECCCcEEE
Confidence 578999999999999998646999999999999998652 22 256788999999999999998 9999999999999
Q ss_pred EECCCCCCeeEEEe-------cCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 304 WDTRVGKSALTSFK-------AHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 304 wD~r~~~~~~~~~~-------~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
||++++ .++..+. +|...|++++|+|++ .+|+||+.|++|+|||+++++
T Consensus 217 wd~~~g-~~~~~~~~~~~~~~~h~~~V~~v~~spdg-~~l~s~s~D~~v~lWd~~~~~ 272 (611)
T 1nr0_A 217 YNGVDG-TKTGVFEDDSLKNVAHSGSVFGLTWSPDG-TKIASASADKTIKIWNVATLK 272 (611)
T ss_dssp EETTTC-CEEEECBCTTSSSCSSSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTE
T ss_pred EECCCC-cEeeeeccccccccccCCCEEEEEECCCC-CEEEEEeCCCeEEEEeCCCCc
Confidence 999885 4555553 799999999999999 999999999999999998754
No 45
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.94 E-value=3.5e-26 Score=218.48 Aligned_cols=172 Identities=15% Similarity=0.200 Sum_probs=142.1
Q ss_pred EEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCC
Q 018322 160 RKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNP 239 (358)
Q Consensus 160 ~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~ 239 (358)
...+|...|++|+|+|.++.+||+|+.||+|+|||+... .......+.+|...|++|+|+|
T Consensus 114 ~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~-------------------~~~~~~~~~gH~~~V~~l~f~p 174 (435)
T 4e54_B 114 KAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIK-------------------DKPTFIKGIGAGGSITGLKFNP 174 (435)
T ss_dssp EEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCC-------------------SCCEEECCCSSSCCCCEEEECS
T ss_pred cCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCC-------------------CceeEEEccCCCCCEEEEEEeC
Confidence 456799999999999987789999999999999999762 1233445678999999999998
Q ss_pred CCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEecC
Q 018322 240 ITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAH 319 (358)
Q Consensus 240 ~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h 319 (358)
.+..+|+||+.||+|++||++.. ... .......+...+.+++|+|++. +|++|+.||.|++||++. ..+..+.+|
T Consensus 175 ~~~~~l~s~s~D~~v~iwd~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~dg~i~~wd~~~--~~~~~~~~h 249 (435)
T 4e54_B 175 LNTNQFYASSMEGTTRLQDFKGN-ILR-VFASSDTINIWFCSLDVSASSR-MVVTGDNVGNVILLNMDG--KELWNLRMH 249 (435)
T ss_dssp SCTTEEEEECSSSCEEEEETTSC-EEE-EEECCSSCSCCCCCEEEETTTT-EEEEECSSSBEEEEESSS--CBCCCSBCC
T ss_pred CCCCEEEEEeCCCEEEEeeccCC-cee-EEeccCCCCccEEEEEECCCCC-EEEEEeCCCcEeeeccCc--ceeEEEecc
Confidence 54449999999999999999752 211 0112223455688999999998 999999999999999975 456778899
Q ss_pred CCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCCC
Q 018322 320 NADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKV 355 (358)
Q Consensus 320 ~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~~ 355 (358)
...|++++|+|++..+|++|+.|++|+|||+++.+.
T Consensus 250 ~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~ 285 (435)
T 4e54_B 250 KKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRG 285 (435)
T ss_dssp SSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCS
T ss_pred cceEEeeeecCCCceEEEEecCcceeeEEecccccc
Confidence 999999999999877999999999999999998654
No 46
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.94 E-value=1.6e-25 Score=211.31 Aligned_cols=175 Identities=17% Similarity=0.347 Sum_probs=147.3
Q ss_pred EecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCC
Q 018322 161 KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPI 240 (358)
Q Consensus 161 ~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~ 240 (358)
+.+|.+.|++++|+|.+..+||+|+.||+|+|||+....... ....++..+.+|...|++++|+|+
T Consensus 77 ~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~--------------~~~~~~~~~~~h~~~v~~~~~~p~ 142 (402)
T 2aq5_A 77 VCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVL--------------PLREPVITLEGHTKRVGIVAWHPT 142 (402)
T ss_dssp BCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSS--------------CBCSCSEEEECCSSCEEEEEECSS
T ss_pred EecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCcc--------------ccCCceEEecCCCCeEEEEEECcC
Confidence 458999999999999433899999999999999998731100 012677889999999999999999
Q ss_pred CCCeEEEEeCCCcEEEEecCCCCCcccCCCcc--ccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEE-e
Q 018322 241 TTGRLVTGDCNSCIYLWEPASDATWNVDPNPF--IGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSF-K 317 (358)
Q Consensus 241 ~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~--~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~-~ 317 (358)
+..+|++|+.||.|++||+.++ ... ..+ .+|...|.+++|+|++. +|++++.||.|++||++++ ..+..+ .
T Consensus 143 ~~~~l~s~~~dg~i~iwd~~~~-~~~---~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~-~~~~~~~~ 216 (402)
T 2aq5_A 143 AQNVLLSAGCDNVILVWDVGTG-AAV---LTLGPDVHPDTIYSVDWSRDGA-LICTSCRDKRVRVIEPRKG-TVVAEKDR 216 (402)
T ss_dssp BTTEEEEEETTSCEEEEETTTT-EEE---EEECTTTCCSCEEEEEECTTSS-CEEEEETTSEEEEEETTTT-EEEEEEEC
T ss_pred CCCEEEEEcCCCEEEEEECCCC-Ccc---EEEecCCCCCceEEEEECCCCC-EEEEEecCCcEEEEeCCCC-ceeeeecc
Confidence 8549999999999999999874 322 345 67999999999999988 9999999999999999985 466666 6
Q ss_pred cCCCC-eEEEEEeCCCCcEEEEE---eCCCCEEEEeCCCCCCC
Q 018322 318 AHNAD-VNVISWNRLASCLLASG---SDDGTFSIHDLRLLKVR 356 (358)
Q Consensus 318 ~h~~~-V~~i~~~p~~~~~lasg---s~Dg~i~iwDlr~~~~~ 356 (358)
.|... +.++.|+|++ .+|++| +.|+.|++||+++.+.+
T Consensus 217 ~~~~~~~~~~~~~~~~-~~l~~g~~~~~d~~i~iwd~~~~~~~ 258 (402)
T 2aq5_A 217 PHEGTRPVHAVFVSEG-KILTTGFSRMSERQVALWDTKHLEEP 258 (402)
T ss_dssp SSCSSSCCEEEECSTT-EEEEEEECTTCCEEEEEEETTBCSSC
T ss_pred CCCCCcceEEEEcCCC-cEEEEeccCCCCceEEEEcCccccCC
Confidence 78776 8999999999 899999 78999999999987653
No 47
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.94 E-value=8e-26 Score=206.95 Aligned_cols=172 Identities=23% Similarity=0.415 Sum_probs=139.2
Q ss_pred EEEecCCCceeEEEEcCCC-CcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEe
Q 018322 159 LRKVAHQGCVNRIRAMTQN-PHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDW 237 (358)
Q Consensus 159 ~~~~~H~~~V~~i~~~p~~-~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 237 (358)
..+.+|.+.|++++|+|+. ..+||+|+.||+|+|||+..... ......+.+|...+.+++|
T Consensus 97 ~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~------------------~~~~~~~~~h~~~v~~~~~ 158 (316)
T 3bg1_A 97 HEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQ------------------WEVKKINNAHTIGCNAVSW 158 (316)
T ss_dssp EEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSC------------------EEECCBTTSSSSCBCCCEE
T ss_pred EEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCC------------------cceeeeeccccCCcceEEE
Confidence 4567899999999999973 37999999999999999876210 0112345688889999999
Q ss_pred CCCC-----------------CCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCC---CCEEEEEEC
Q 018322 238 NPIT-----------------TGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTE---PDVFASCSV 297 (358)
Q Consensus 238 s~~~-----------------~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~---~~~las~s~ 297 (358)
+|.. . +|++|+.|++|++||++..+.+. ....+.+|...|.+++|+|++ ..+||+|+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~-~l~sgs~D~~v~lWd~~~~~~~~-~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~ 236 (316)
T 3bg1_A 159 APAVVPGSLIDHPSGQKPNYIK-RFASGGCDNLIKLWKEEEDGQWK-EEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQ 236 (316)
T ss_dssp CCCCCC------CCSCCCCCCC-BEECCBTTSBCCEEEECTTSCEE-EEECCBCCSSCEEEEECCCCSSCSCCEEEEEET
T ss_pred ccccCCccccccccccCccccc-eEEEecCCCeEEEEEeCCCCccc-eeeecccCCCceEEEEecCCCCCCCceEEEEcC
Confidence 9973 4 89999999999999997533221 124678899999999999986 238999999
Q ss_pred CCcEEEEECCCCC---CeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCC
Q 018322 298 DGHIAIWDTRVGK---SALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLR 351 (358)
Q Consensus 298 Dg~I~iwD~r~~~---~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr 351 (358)
||+|+|||++... .....+..|...|++++|+|++ .+||+|+.||+|+||++.
T Consensus 237 D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 237 DGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITA-NILAVSGGDNKVTLWKES 292 (316)
T ss_dssp TCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTT-CCEEEEESSSCEEEEEEC
T ss_pred CCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCC-CEEEEEcCCCeEEEEEEC
Confidence 9999999998621 1233456789999999999999 899999999999999976
No 48
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.94 E-value=7e-25 Score=205.16 Aligned_cols=205 Identities=16% Similarity=0.121 Sum_probs=163.8
Q ss_pred CcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018322 67 WPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDD 146 (358)
Q Consensus 67 wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (358)
-+..++.|.|++. .+|++|+ .++.|.||++..
T Consensus 74 ~~v~~~~~~~~~~----------~~l~s~~-----~dg~i~iwd~~~--------------------------------- 105 (383)
T 3ei3_B 74 RRVTSLEWHPTHP----------TTVAVGS-----KGGDIILWDYDV--------------------------------- 105 (383)
T ss_dssp SCEEEEEECSSCT----------TEEEEEE-----BTSCEEEEETTS---------------------------------
T ss_pred CCEEEEEECCCCC----------CEEEEEc-----CCCeEEEEeCCC---------------------------------
Confidence 4456777777641 3778887 356899998731
Q ss_pred ccCCCCCCCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEc
Q 018322 147 DEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG 226 (358)
Q Consensus 147 ~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (358)
..........+|.+.|++++|+|.+..+|++++.||.|++||+.. ..+..+.
T Consensus 106 ------~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~----------------------~~~~~~~ 157 (383)
T 3ei3_B 106 ------QNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG----------------------SVIQVFA 157 (383)
T ss_dssp ------TTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS----------------------CEEEEEE
T ss_pred ------cccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC----------------------CceEEEe
Confidence 123333444579999999999995448999999999999999985 2233343
Q ss_pred ---CCCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEE
Q 018322 227 ---GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAI 303 (358)
Q Consensus 227 ---~h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~i 303 (358)
+|...+.+++|+|++. +|++|+.||.|++||++. .. ...+.+|...|.+++|+|++..+|++|+.|+.|++
T Consensus 158 ~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~--~~---~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~i 231 (383)
T 3ei3_B 158 KTDSWDYWYCCVDVSVSRQ-MLATGDSTGRLLLLGLDG--HE---IFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKL 231 (383)
T ss_dssp CCCCSSCCEEEEEEETTTT-EEEEEETTSEEEEEETTS--CE---EEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEE
T ss_pred ccCCCCCCeEEEEECCCCC-EEEEECCCCCEEEEECCC--CE---EEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEE
Confidence 3447899999999998 999999999999999942 22 25677899999999999999889999999999999
Q ss_pred EECCCCC---CeeEEEecCCCCeEEEEEeC-CCCcEEEEEeCCCCEEEEeCCCCCC
Q 018322 304 WDTRVGK---SALTSFKAHNADVNVISWNR-LASCLLASGSDDGTFSIHDLRLLKV 355 (358)
Q Consensus 304 wD~r~~~---~~~~~~~~h~~~V~~i~~~p-~~~~~lasgs~Dg~i~iwDlr~~~~ 355 (358)
||+++.. .++..+ .|...|++++|+| ++ .+|++++.||.|++||+++++.
T Consensus 232 wd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~-~~l~~~~~d~~i~iwd~~~~~~ 285 (383)
T 3ei3_B 232 WDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDS-TKLLTTDQRNEIRVYSSYDWSK 285 (383)
T ss_dssp EEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTS-CEEEEEESSSEEEEEETTBTTS
T ss_pred EeCCCCCcccceEEEe-cCCCceEEEEEcCCCC-CEEEEEcCCCcEEEEECCCCcc
Confidence 9999732 234444 7999999999999 88 8999999999999999998754
No 49
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=6.6e-25 Score=203.64 Aligned_cols=211 Identities=21% Similarity=0.298 Sum_probs=167.8
Q ss_pred cCcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018322 66 GWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (358)
Q Consensus 66 ~wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (358)
.-+..++.|.|+.. ..+|++|+ .++.|.||++..
T Consensus 55 ~~~v~~~~~~~~~~---------~~~l~s~~-----~dg~v~iwd~~~-------------------------------- 88 (379)
T 3jrp_A 55 EGPVWRVDWAHPKF---------GTILASCS-----YDGKVLIWKEEN-------------------------------- 88 (379)
T ss_dssp SSCEEEEEECCGGG---------CSEEEEEE-----TTSCEEEEEEET--------------------------------
T ss_pred CCcEEEEEeCCCCC---------CCEEEEec-----cCCEEEEEEcCC--------------------------------
Confidence 45677888876621 14777777 456899999841
Q ss_pred CccCCCCCCCeEEEEEecCCCceeEEEEcCC--CCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcE
Q 018322 146 DDEEGGSGTPILQLRKVAHQGCVNRIRAMTQ--NPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLV 223 (358)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~--~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (358)
...........|.+.|++++|+|+ + .+|++++.||.|++||+... ......
T Consensus 89 -------~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~-------------------~~~~~~ 141 (379)
T 3jrp_A 89 -------GRWSQIAVHAVHSASVNSVQWAPHEYG-PLLLVASSDGKVSVVEFKEN-------------------GTTSPI 141 (379)
T ss_dssp -------TEEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTSEEEEEECCTT-------------------SCCCEE
T ss_pred -------CceeEeeeecCCCcceEEEEeCCCCCC-CEEEEecCCCcEEEEecCCC-------------------CceeeE
Confidence 122244566779999999999998 6 79999999999999999872 123455
Q ss_pred EEcCCCCCeEEEEeCC-------------CCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCC---
Q 018322 224 KFGGHKDEGYAIDWNP-------------ITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPT--- 287 (358)
Q Consensus 224 ~~~~h~~~v~~l~~s~-------------~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~--- 287 (358)
.+.+|...|.+++|+| ++. +|++|+.||.|++||++...........+.+|...|.+++|+|+
T Consensus 142 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~ 220 (379)
T 3jrp_A 142 IIDAHAIGVNSASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLL 220 (379)
T ss_dssp EEECCTTCEEEEEECCCC----------CTTC-EEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSS
T ss_pred EecCCCCceEEEEEcCccccccccccCCCCCC-EEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCC
Confidence 6788999999999999 466 99999999999999998754332223567789999999999999
Q ss_pred CCCEEEEEECCCcEEEEECCCCCCee--EE--EecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCC
Q 018322 288 EPDVFASCSVDGHIAIWDTRVGKSAL--TS--FKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRL 352 (358)
Q Consensus 288 ~~~~las~s~Dg~I~iwD~r~~~~~~--~~--~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~ 352 (358)
+. +|++++.||.|+|||++.+.... .. ...|...|++++|+|++ .+|++++.||.|+||+++.
T Consensus 221 ~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 221 RS-YLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSG-NVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp SE-EEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSS-CCEEEEESSSSEEEEEEEE
T ss_pred CC-eEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCC-CEEEEecCCCcEEEEeCCC
Confidence 56 99999999999999999853221 11 23488899999999999 8999999999999999874
No 50
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.94 E-value=1.5e-24 Score=196.72 Aligned_cols=194 Identities=16% Similarity=0.282 Sum_probs=142.8
Q ss_pred eEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccc--ccc-----------ccCCCC-------C
Q 018322 156 ILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAES--ETI-----------VGQGAP-------Q 215 (358)
Q Consensus 156 ~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~--~~~-----------~~~~~~-------~ 215 (358)
...+...+|...|++++|+|++ .+||+|+.||+|+||++.......... ... ...... .
T Consensus 58 ~~~~~~~~~~~~V~~v~~~~~~-~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~ 136 (318)
T 4ggc_A 58 LQLLQMEQPGEYISSVAWIKEG-NYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDV 136 (318)
T ss_dssp EEEEECCSTTCCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEET
T ss_pred EEEEEecCCCCeEEEEEECCCC-CEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeec
Confidence 3335566789999999999999 799999999999999998632211000 000 000000 0
Q ss_pred CCCCCCcEEEcCCCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCcc-----------------------
Q 018322 216 VSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPF----------------------- 272 (358)
Q Consensus 216 ~~~~~~~~~~~~h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~----------------------- 272 (358)
......+..+.+|...+.++.|++.+. +|++|+.||.|++||++++..........
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 215 (318)
T 4ggc_A 137 RVAEHHVATLSGHSQEVCGLRWAPDGR-HLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATG 215 (318)
T ss_dssp TSSSCEEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEE
T ss_pred CCCceeEEEEcCccCceEEEEEcCCCC-EEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEE
Confidence 022345567889999999999999998 99999999999999997632110000000
Q ss_pred ---------------------ccCCCcEEEEEECCCCCCEEEEE--ECCCcEEEEECCCCCCeeEEEecCCCCeEEEEEe
Q 018322 273 ---------------------IGHSASVEDLQWSPTEPDVFASC--SVDGHIAIWDTRVGKSALTSFKAHNADVNVISWN 329 (358)
Q Consensus 273 ---------------------~~h~~~V~~v~~sp~~~~~las~--s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~~ 329 (358)
..+...+..+.|+|.+. .++++ +.|+.|+|||++++ .++..+.+|...|++|+|+
T Consensus 216 ~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~sg~~d~~i~iwd~~~~-~~~~~l~gH~~~V~~l~~s 293 (318)
T 4ggc_A 216 GGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYK-ELISGHGFAQNQLVIWKYPTM-AKVAELKGHTSRVLSLTMS 293 (318)
T ss_dssp ECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTT-EEEEEECTTTCCEEEEETTTC-CEEEEECCCSSCEEEEEEC
T ss_pred ecCCCCEEEEEecccccccccccceeeeeeeeeccccc-ceEEEEEcCCCEEEEEECCCC-cEEEEEcCCCCCEEEEEEc
Confidence 12345567778888877 44444 37999999999985 5888899999999999999
Q ss_pred CCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 330 RLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 330 p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
|++ .+|||||.||+|+|||+..+.
T Consensus 294 pdg-~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 294 PDG-ATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp TTS-SCEEEEETTTEEEEECCSCCC
T ss_pred CCC-CEEEEEecCCeEEEEECCCCC
Confidence 999 899999999999999998764
No 51
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.94 E-value=2.6e-25 Score=209.61 Aligned_cols=170 Identities=19% Similarity=0.355 Sum_probs=147.2
Q ss_pred EecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCC------CCCeEE
Q 018322 161 KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGH------KDEGYA 234 (358)
Q Consensus 161 ~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h------~~~v~~ 234 (358)
...|.+.|+++.|+|++..+|++++.||.|++||+.. ..++..+..| ...+.+
T Consensus 161 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~---------------------~~~~~~~~~~~~~~~~~~~v~~ 219 (416)
T 2pm9_A 161 SMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKA---------------------KKEVIHLSYTSPNSGIKQQLSV 219 (416)
T ss_dssp SCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTT---------------------TEEEEEECCCCCSSCCCCCEEE
T ss_pred ccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCC---------------------CCcceEEeccccccccCCceEE
Confidence 4579999999999999658999999999999999987 3445555554 789999
Q ss_pred EEeCCCCCCeEEEEeCCC---cEEEEecCCCCCcccCCCccc-cCCCcEEEEEECC-CCCCEEEEEECCCcEEEEECCCC
Q 018322 235 IDWNPITTGRLVTGDCNS---CIYLWEPASDATWNVDPNPFI-GHSASVEDLQWSP-TEPDVFASCSVDGHIAIWDTRVG 309 (358)
Q Consensus 235 l~~s~~~~~~l~sgs~dg---~I~lwd~~~~~~~~~~~~~~~-~h~~~V~~v~~sp-~~~~~las~s~Dg~I~iwD~r~~ 309 (358)
++|+|++..+|++|+.++ .|++||+++..... ..+. +|...|.+++|+| ++. +|++++.||.|++||++++
T Consensus 220 ~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~---~~~~~~~~~~v~~~~~s~~~~~-~l~s~~~dg~v~~wd~~~~ 295 (416)
T 2pm9_A 220 VEWHPKNSTRVATATGSDNDPSILIWDLRNANTPL---QTLNQGHQKGILSLDWCHQDEH-LLLSSGRDNTVLLWNPESA 295 (416)
T ss_dssp EEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCS---BCCCSCCSSCEEEEEECSSCSS-CEEEEESSSEEEEECSSSC
T ss_pred EEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCc---EEeecCccCceeEEEeCCCCCC-eEEEEeCCCCEEEeeCCCC
Confidence 999999855899999998 99999998753332 5566 8999999999999 666 9999999999999999985
Q ss_pred CCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCCCC
Q 018322 310 KSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKVR 356 (358)
Q Consensus 310 ~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~~~ 356 (358)
.++..+..|...|++++|+|+++.+|++++.||.|+|||+++.+..
T Consensus 296 -~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~ 341 (416)
T 2pm9_A 296 -EQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNT 341 (416)
T ss_dssp -CEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCS
T ss_pred -ccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCC
Confidence 5788889999999999999998789999999999999999887643
No 52
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.8e-25 Score=218.49 Aligned_cols=164 Identities=13% Similarity=0.186 Sum_probs=139.6
Q ss_pred EEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEE--Ee
Q 018322 160 RKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAI--DW 237 (358)
Q Consensus 160 ~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l--~~ 237 (358)
.+.+|.+.|++++|++.+ .||+|+.||+|+|||+.. ...+...+.+|...|++| +|
T Consensus 261 ~l~~h~~~v~sv~~s~~~--~lasgs~DgtV~lWD~~~--------------------~~~~~~~~~~H~~~V~sv~~~~ 318 (524)
T 2j04_B 261 TLSLADSLITTFDFLSPT--TVVCGFKNGFVAEFDLTD--------------------PEVPSFYDQVHDSYILSVSTAY 318 (524)
T ss_dssp EECCTTTCEEEEEESSSS--EEEEEETTSEEEEEETTB--------------------CSSCSEEEECSSSCEEEEEEEC
T ss_pred EEEcCCCCEEEEEecCCC--eEEEEeCCCEEEEEECCC--------------------CCCceEEeecccccEEEEEEEc
Confidence 456899999999999854 899999999999999986 235667788999999999 57
Q ss_pred CCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCC--cEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEE
Q 018322 238 NPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSA--SVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTS 315 (358)
Q Consensus 238 s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~--~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~ 315 (358)
++++..+||||+.|++|+|||+++.. .. ..+.+|.. .|.+|+|+|++. .|++++.|++|+|||++.+ .++..
T Consensus 319 s~~g~~~laS~S~D~tvklWD~~~~~-~~---~~~~~~~~~~~v~~v~fsp~~~-~l~s~~~d~tv~lwd~~~~-~~~~~ 392 (524)
T 2j04_B 319 SDFEDTVVSTVAVDGYFYIFNPKDIA-TT---KTTVSRFRGSNLVPVVYCPQIY-SYIYSDGASSLRAVPSRAA-FAVHP 392 (524)
T ss_dssp CTTSCCEEEEEETTSEEEEECGGGHH-HH---CEEEEECSCCSCCCEEEETTTT-EEEEECSSSEEEEEETTCT-TCCEE
T ss_pred CCCCCeEEEEeccCCeEEEEECCCCC-cc---cccccccccCcccceEeCCCcC-eEEEeCCCCcEEEEECccc-cccee
Confidence 88772399999999999999998632 22 34556653 588999999988 8999999999999999985 46677
Q ss_pred EecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCC
Q 018322 316 FKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRL 352 (358)
Q Consensus 316 ~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~ 352 (358)
+.+|...|++|+|+|++ .+|++|+.||+|+|||+..
T Consensus 393 l~gH~~~V~sva~Sp~g-~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 393 LVSRETTITAIGVSRLH-PMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp EEECSSCEEEEECCSSC-CBCEEEETTTEEECCBSCS
T ss_pred eecCCCceEEEEeCCCC-CeEEEEECCCEEEEEechH
Confidence 88999999999999999 8999999999999999753
No 53
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.93 E-value=9.1e-24 Score=197.91 Aligned_cols=211 Identities=18% Similarity=0.221 Sum_probs=167.3
Q ss_pred ccCcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCC
Q 018322 65 IGWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDS 144 (358)
Q Consensus 65 ~~wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (358)
..-+..++.|.|+.. .+|++|+ .++.|.||++.
T Consensus 98 ~~~~v~~~~~~~~~~----------~~l~s~~-----~d~~i~iwd~~-------------------------------- 130 (408)
T 4a11_B 98 HRYSVETVQWYPHDT----------GMFTSSS-----FDKTLKVWDTN-------------------------------- 130 (408)
T ss_dssp CSSCEEEEEECTTCT----------TCEEEEE-----TTSEEEEEETT--------------------------------
T ss_pred CCCcEEEEEEccCCC----------cEEEEEe-----CCCeEEEeeCC--------------------------------
Confidence 456778888888421 3677776 45689999873
Q ss_pred CCccCCCCCCCeEEEEEecCCCceeEEEEcCCCC--cEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCc
Q 018322 145 DDDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNP--HICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPL 222 (358)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~--~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (358)
.... .....|...+.++.++|.++ .++++++.+|.|++||+.. ...+
T Consensus 131 ---------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~---------------------~~~~ 179 (408)
T 4a11_B 131 ---------TLQT-ADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKS---------------------GSCS 179 (408)
T ss_dssp ---------TTEE-EEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSS---------------------SCCC
T ss_pred ---------CCcc-ceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCC---------------------ccee
Confidence 1112 23345889999999999653 4999999999999999986 4667
Q ss_pred EEEcCCCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcc------------cCCCccccCCCcEEEEEECCCCCC
Q 018322 223 VKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWN------------VDPNPFIGHSASVEDLQWSPTEPD 290 (358)
Q Consensus 223 ~~~~~h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~------------~~~~~~~~h~~~V~~v~~sp~~~~ 290 (358)
..+.+|...|.+++|+|++..+|++|+.||.|++||++...... .....+..|...|.+++|+|++.
T Consensus 180 ~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~- 258 (408)
T 4a11_B 180 HILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGL- 258 (408)
T ss_dssp EEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSS-
T ss_pred eeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCC-
Confidence 88889999999999999987458999999999999998743211 11223367899999999999998
Q ss_pred EEEEEECCCcEEEEECCCCC----------------------------------------------CeeEEEecCCCCeE
Q 018322 291 VFASCSVDGHIAIWDTRVGK----------------------------------------------SALTSFKAHNADVN 324 (358)
Q Consensus 291 ~las~s~Dg~I~iwD~r~~~----------------------------------------------~~~~~~~~h~~~V~ 324 (358)
+|++++.||.|++||++++. .++..+.+|...|+
T Consensus 259 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~ 338 (408)
T 4a11_B 259 HLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVD 338 (408)
T ss_dssp EEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEE
T ss_pred EEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEE
Confidence 99999999999999998642 23445677999999
Q ss_pred EEEEeCCCCcEEEEEeCCCCEEEEeCCCCCC
Q 018322 325 VISWNRLASCLLASGSDDGTFSIHDLRLLKV 355 (358)
Q Consensus 325 ~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~~ 355 (358)
+++|+|++ .+|++|+.||.|++||+++.+.
T Consensus 339 ~~~~s~~~-~~l~s~~~dg~i~iw~~~~~~~ 368 (408)
T 4a11_B 339 CCVFQSNF-QELYSGSRDCNILAWVPSLYEP 368 (408)
T ss_dssp EEEEETTT-TEEEEEETTSCEEEEEECC---
T ss_pred EEEEcCCC-CEEEEECCCCeEEEEeCCCCCc
Confidence 99999999 9999999999999999998754
No 54
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.93 E-value=1.4e-24 Score=206.73 Aligned_cols=239 Identities=13% Similarity=0.156 Sum_probs=166.8
Q ss_pred cCcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018322 66 GWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (358)
Q Consensus 66 ~wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (358)
.-+..++.|-|++ .+|++|+ .++.|.||++.........
T Consensus 28 ~~~V~~v~~s~~g-----------~~la~g~-----~dg~v~iw~~~~~~~~~~~------------------------- 66 (447)
T 3dw8_B 28 ADIISTVEFNHSG-----------ELLATGD-----KGGRVVIFQQEQENKIQSH------------------------- 66 (447)
T ss_dssp GGSEEEEEECSSS-----------SEEEEEE-----TTSEEEEEEECC-----CC-------------------------
T ss_pred cCcEEEEEECCCC-----------CEEEEEc-----CCCeEEEEEecCCCCCCcc-------------------------
Confidence 3456788898875 4888887 4569999998522110000
Q ss_pred CccCCCCCCCeEEEEEecCC------------CceeEEEEcCCCC-cEEEEEeCCCcEEEEeCCCCccccccccccccCC
Q 018322 146 DDEEGGSGTPILQLRKVAHQ------------GCVNRIRAMTQNP-HICASWADTGHVQVWDLRSHLNALAESETIVGQG 212 (358)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~------------~~V~~i~~~p~~~-~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~ 212 (358)
.. ....+...+.+|. +.|++++|+|++. .+|++++.||+|+||++................+
T Consensus 67 --~~---~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g 141 (447)
T 3dw8_B 67 --SR---GEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDG 141 (447)
T ss_dssp --CC---CCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC----
T ss_pred --cc---cceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccc
Confidence 00 1233456677898 8899999999863 5889999999999999875221100000000000
Q ss_pred ----CCCCC--------------CCCCcEE-EcCCCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCccc----CC
Q 018322 213 ----APQVS--------------NQSPLVK-FGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNV----DP 269 (358)
Q Consensus 213 ----~~~~~--------------~~~~~~~-~~~h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~----~~ 269 (358)
..... ...+... ..+|...|++++|+|++. +|++| .||.|++||++..+.... ..
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~ 219 (447)
T 3dw8_B 142 RYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYE-TYLSA-DDLRINLWHLEITDRSFNIVDIKP 219 (447)
T ss_dssp ----CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSS-EEEEE-CSSEEEEEETTEEEEEEEEEECCC
T ss_pred cccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCC-EEEEe-CCCeEEEEECCCCCceeeeeeccc
Confidence 00000 0011123 368999999999999998 99998 799999999984332211 11
Q ss_pred CccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCC---eeEEEecCCC------------CeEEEEEeCCCCc
Q 018322 270 NPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKS---ALTSFKAHNA------------DVNVISWNRLASC 334 (358)
Q Consensus 270 ~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~---~~~~~~~h~~------------~V~~i~~~p~~~~ 334 (358)
..+.+|...|.+++|+|++..+|++|+.||.|++||++++.. .+..+..|.. .|++++|+|++ .
T Consensus 220 ~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~ 298 (447)
T 3dw8_B 220 ANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSG-R 298 (447)
T ss_dssp SSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTS-S
T ss_pred ccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCC-C
Confidence 246789999999999999844999999999999999998542 1567777775 89999999999 8
Q ss_pred EEEEEeCCCCEEEEeCCCCC
Q 018322 335 LLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 335 ~lasgs~Dg~i~iwDlr~~~ 354 (358)
+|++|+. |.|+|||+++..
T Consensus 299 ~l~~~~~-~~v~iwd~~~~~ 317 (447)
T 3dw8_B 299 YMMTRDY-LSVKVWDLNMEN 317 (447)
T ss_dssp EEEEEES-SEEEEEETTCCS
T ss_pred EEEEeeC-CeEEEEeCCCCc
Confidence 9999999 999999999733
No 55
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.93 E-value=4e-25 Score=201.82 Aligned_cols=176 Identities=18% Similarity=0.275 Sum_probs=144.2
Q ss_pred EEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeC
Q 018322 159 LRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWN 238 (358)
Q Consensus 159 ~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 238 (358)
..+.+|.+.|++++|+|++ .+||+|+.||.|+|||+..... .......+.+|...|++++|+
T Consensus 5 ~~~~gH~~~v~~~~~~~~~-~~l~~~~~dg~i~iw~~~~~~~-----------------~~~~~~~~~~~~~~v~~~~~~ 66 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYG-RHVATCSSDQHIKVFKLDKDTS-----------------NWELSDSWRAHDSSIVAIDWA 66 (351)
T ss_dssp CEECCCSSCEEEEEECSSS-SEEEEEETTSEEEEEEECSSSC-----------------CEEEEEEEECCSSCEEEEEEC
T ss_pred ccCcccccceeEEEEcCCC-CEEEEeeCCCeEEEEECCCCCC-----------------cceecceeccCCCcEEEEEEc
Confidence 4456899999999999988 7999999999999999986211 113556778999999999999
Q ss_pred CC--CCCeEEEEeCCCcEEEEecCCCCCcc-----cCCCccccCCCcEEEEEECCC--CCCEEEEEECCCcEEEEECCCC
Q 018322 239 PI--TTGRLVTGDCNSCIYLWEPASDATWN-----VDPNPFIGHSASVEDLQWSPT--EPDVFASCSVDGHIAIWDTRVG 309 (358)
Q Consensus 239 ~~--~~~~l~sgs~dg~I~lwd~~~~~~~~-----~~~~~~~~h~~~V~~v~~sp~--~~~~las~s~Dg~I~iwD~r~~ 309 (358)
|. +. +|++|+.||.|++||++.+.... .....+.+|...|.+++|+|+ +. +|++++.||.|++||++.+
T Consensus 67 ~~~d~~-~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~v~iwd~~~~ 144 (351)
T 3f3f_A 67 SPEYGR-IIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGL-KLACLGNDGILRLYDALEP 144 (351)
T ss_dssp CGGGCS-EEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTCEEEEEECSST
T ss_pred CCCCCC-EEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCc-EEEEecCCCcEEEecCCCh
Confidence 94 66 99999999999999998743211 112456789999999999999 77 9999999999999998764
Q ss_pred CC-----------------------------------------------------------eeEEEecCCCCeEEEEEeC
Q 018322 310 KS-----------------------------------------------------------ALTSFKAHNADVNVISWNR 330 (358)
Q Consensus 310 ~~-----------------------------------------------------------~~~~~~~h~~~V~~i~~~p 330 (358)
.. .+..+.+|...|++++|+|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p 224 (351)
T 3f3f_A 145 SDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAP 224 (351)
T ss_dssp TCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECC
T ss_pred HHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECC
Confidence 21 1334467899999999999
Q ss_pred CCC---cEEEEEeCCCCEEEEeCCCCC
Q 018322 331 LAS---CLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 331 ~~~---~~lasgs~Dg~i~iwDlr~~~ 354 (358)
++. .+|++|+.||.|++||++...
T Consensus 225 ~~~~~~~~l~s~~~dg~i~iwd~~~~~ 251 (351)
T 3f3f_A 225 SIGRWYQLIATGCKDGRIRIFKITEKL 251 (351)
T ss_dssp CSSCSSEEEEEEETTSCEEEEEEEECC
T ss_pred CCCCcceEEEEEcCCCeEEEEeCCCCc
Confidence 974 699999999999999998754
No 56
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.93 E-value=3.6e-25 Score=208.62 Aligned_cols=225 Identities=14% Similarity=0.275 Sum_probs=172.0
Q ss_pred hhcccccCcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCC
Q 018322 60 LHAFHIGWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSD 139 (358)
Q Consensus 60 ~~~~~~~wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (358)
+..+...-+..++.|.|++ .+|++|+ .++.|.||++....
T Consensus 61 ~~~~~~~~~v~~~~~s~~~-----------~~l~~~~-----~dg~v~vw~~~~~~------------------------ 100 (416)
T 2pm9_A 61 IASLQVDSKFNDLDWSHNN-----------KIIAGAL-----DNGSLELYSTNEAN------------------------ 100 (416)
T ss_dssp SCCCCCSSCEEEEEECSSS-----------SCEEEEE-----SSSCEEEECCSSTT------------------------
T ss_pred EEEEecCCceEEEEECCCC-----------CeEEEEc-----cCCeEEEeeccccc------------------------
Confidence 3344455677889998874 4777777 35689999873100
Q ss_pred CCCCCCCccCCCCCCCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCC
Q 018322 140 SDEDSDDDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQ 219 (358)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (358)
........+.+|.+.|++++|+|++..+|++++.||.|++||+.......... ..
T Consensus 101 -------------~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~------------~~ 155 (416)
T 2pm9_A 101 -------------NAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNY------------TP 155 (416)
T ss_dssp -------------SCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTC------------CC
T ss_pred -------------ccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccc------------cc
Confidence 01224456778999999999999844899999999999999998732100000 00
Q ss_pred CCcEEEcCCCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccc------cCCCcEEEEEECCCCCCEEE
Q 018322 220 SPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFI------GHSASVEDLQWSPTEPDVFA 293 (358)
Q Consensus 220 ~~~~~~~~h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~------~h~~~V~~v~~sp~~~~~la 293 (358)
.....+.+|...+++++|+|++..+|++|+.||.|++||+++... . ..+. +|...|.+++|+|++..+|+
T Consensus 156 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~-~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 231 (416)
T 2pm9_A 156 LTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKE-V---IHLSYTSPNSGIKQQLSVVEWHPKNSTRVA 231 (416)
T ss_dssp BCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEE-E---EEECCCCCSSCCCCCEEEEEECSSCTTEEE
T ss_pred cccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCc-c---eEEeccccccccCCceEEEEECCCCCCEEE
Confidence 111234678899999999999444999999999999999987432 2 2233 33789999999999866999
Q ss_pred EEECCC---cEEEEECCCCCCeeEEEe-cCCCCeEEEEEeC-CCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 294 SCSVDG---HIAIWDTRVGKSALTSFK-AHNADVNVISWNR-LASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 294 s~s~Dg---~I~iwD~r~~~~~~~~~~-~h~~~V~~i~~~p-~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
+++.|+ .|++||++.+..++..+. +|...|++++|+| ++ .+|++|+.||.|++||+++.+
T Consensus 232 ~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~~l~s~~~dg~v~~wd~~~~~ 296 (416)
T 2pm9_A 232 TATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDE-HLLLSSGRDNTVLLWNPESAE 296 (416)
T ss_dssp EEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCS-SCEEEEESSSEEEEECSSSCC
T ss_pred EEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCC-CeEEEEeCCCCEEEeeCCCCc
Confidence 999999 999999998656777777 8999999999999 66 999999999999999998765
No 57
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.93 E-value=5.1e-24 Score=196.98 Aligned_cols=202 Identities=17% Similarity=0.246 Sum_probs=156.2
Q ss_pred CcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018322 67 WPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDD 146 (358)
Q Consensus 67 wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (358)
-+..++.|.|++ .+++.|. .++.|.||++.
T Consensus 77 ~~V~~~~~~~~~-----------~~l~s~s-----~D~~v~lwd~~---------------------------------- 106 (343)
T 2xzm_R 77 HFVSDLALSQEN-----------CFAISSS-----WDKTLRLWDLR---------------------------------- 106 (343)
T ss_dssp SCEEEEEECSST-----------TEEEEEE-----TTSEEEEEETT----------------------------------
T ss_pred CceEEEEECCCC-----------CEEEEEc-----CCCcEEEEECC----------------------------------
Confidence 456677787764 4677776 56799999873
Q ss_pred ccCCCCCCCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEc
Q 018322 147 DEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG 226 (358)
Q Consensus 147 ~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (358)
.......+.+|.+.|++++|+|++ .+|++++.|++|+|||+..... .......
T Consensus 107 -------~~~~~~~~~~h~~~v~~v~~sp~~-~~l~s~~~d~~i~~wd~~~~~~-------------------~~~~~~~ 159 (343)
T 2xzm_R 107 -------TGTTYKRFVGHQSEVYSVAFSPDN-RQILSAGAEREIKLWNILGECK-------------------FSSAEKE 159 (343)
T ss_dssp -------SSCEEEEEECCCSCEEEEEECSST-TEEEEEETTSCEEEEESSSCEE-------------------EECCTTT
T ss_pred -------CCcEEEEEcCCCCcEEEEEECCCC-CEEEEEcCCCEEEEEeccCCce-------------------eeeeccc
Confidence 222345677899999999999998 7899999999999999874110 0001123
Q ss_pred CCCCCeEEEEeCCCCC---------CeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEEC
Q 018322 227 GHKDEGYAIDWNPITT---------GRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSV 297 (358)
Q Consensus 227 ~h~~~v~~l~~s~~~~---------~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~ 297 (358)
+|...+.+++|+|.+. .+|++|+.||.|++||... .. ...+.+|...|.+++|+|++. +|++|+.
T Consensus 160 ~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~--~~---~~~~~~h~~~v~~~~~s~~g~-~l~sgs~ 233 (343)
T 2xzm_R 160 NHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF--QI---RYTFKAHESNVNHLSISPNGK-YIATGGK 233 (343)
T ss_dssp SCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT--EE---EEEEECCSSCEEEEEECTTSS-EEEEEET
T ss_pred CCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC--ce---eEEEcCccccceEEEECCCCC-EEEEEcC
Confidence 6888999999999872 2899999999999999532 21 245778999999999999998 9999999
Q ss_pred CCcEEEEECCCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 298 DGHIAIWDTRVGKSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 298 Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
||.|+|||++....+...+ .+...|++++|+|++ .+|++| .|+.|++||+.+.+
T Consensus 234 dg~v~iwd~~~~~~~~~~~-~~~~~v~~v~~sp~~-~~la~~-~d~~v~iw~~~~~~ 287 (343)
T 2xzm_R 234 DKKLLIWDILNLTYPQREF-DAGSTINQIAFNPKL-QWVAVG-TDQGVKIFNLMTQS 287 (343)
T ss_dssp TCEEEEEESSCCSSCSEEE-ECSSCEEEEEECSSS-CEEEEE-ESSCEEEEESSSCC
T ss_pred CCeEEEEECCCCcccceee-cCCCcEEEEEECCCC-CEEEEE-CCCCEEEEEeCCCC
Confidence 9999999996544444444 355679999999998 777655 57889999997654
No 58
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.93 E-value=6.8e-24 Score=193.60 Aligned_cols=203 Identities=16% Similarity=0.251 Sum_probs=168.1
Q ss_pred cCcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018322 66 GWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (358)
Q Consensus 66 ~wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (358)
.-+..++.|.|++ .+|++|+ .++.|.+|++..
T Consensus 97 ~~~v~~~~~~~~~-----------~~l~~~~-----~d~~i~~~d~~~-------------------------------- 128 (337)
T 1gxr_A 97 DNYIRSCKLLPDG-----------CTLIVGG-----EASTLSIWDLAA-------------------------------- 128 (337)
T ss_dssp TSBEEEEEECTTS-----------SEEEEEE-----SSSEEEEEECCC--------------------------------
T ss_pred CCcEEEEEEcCCC-----------CEEEEEc-----CCCcEEEEECCC--------------------------------
Confidence 3455677777764 4677776 456899998731
Q ss_pred CccCCCCCCCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEE
Q 018322 146 DDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF 225 (358)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (358)
..+........|.+.|+++.|+|++ .++++++.+|.|++||+.. ..++..+
T Consensus 129 -------~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~v~~~d~~~---------------------~~~~~~~ 179 (337)
T 1gxr_A 129 -------PTPRIKAELTSSAPACYALAISPDS-KVCFSCCSDGNIAVWDLHN---------------------QTLVRQF 179 (337)
T ss_dssp -------C--EEEEEEECSSSCEEEEEECTTS-SEEEEEETTSCEEEEETTT---------------------TEEEEEE
T ss_pred -------CCcceeeecccCCCceEEEEECCCC-CEEEEEeCCCcEEEEeCCC---------------------Cceeeee
Confidence 1334456677899999999999988 7999999999999999987 4667788
Q ss_pred cCCCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEE
Q 018322 226 GGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWD 305 (358)
Q Consensus 226 ~~h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD 305 (358)
.+|...+.+++|+|++. +|++++.||.|++||+++... . ....|...+.+++|+|++. +|++++.++.|++||
T Consensus 180 ~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~-~----~~~~~~~~v~~~~~s~~~~-~l~~~~~~~~i~~~~ 252 (337)
T 1gxr_A 180 QGHTDGASCIDISNDGT-KLWTGGLDNTVRSWDLREGRQ-L----QQHDFTSQIFSLGYCPTGE-WLAVGMESSNVEVLH 252 (337)
T ss_dssp CCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEE-E----EEEECSSCEEEEEECTTSS-EEEEEETTSCEEEEE
T ss_pred ecccCceEEEEECCCCC-EEEEEecCCcEEEEECCCCce-E----eeecCCCceEEEEECCCCC-EEEEEcCCCcEEEEE
Confidence 88999999999999997 999999999999999987432 1 1234778899999999998 999999999999999
Q ss_pred CCCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCCC
Q 018322 306 TRVGKSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKV 355 (358)
Q Consensus 306 ~r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~~ 355 (358)
++.+. ...+..|...|++++|+|++ .+|++++.||.|++||+++.+.
T Consensus 253 ~~~~~--~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~~~~~~~~ 299 (337)
T 1gxr_A 253 VNKPD--KYQLHLHESCVLSLKFAYCG-KWFVSTGKDNLLNAWRTPYGAS 299 (337)
T ss_dssp TTSSC--EEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCCE
T ss_pred CCCCC--eEEEcCCccceeEEEECCCC-CEEEEecCCCcEEEEECCCCeE
Confidence 99843 45678899999999999999 8999999999999999987653
No 59
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.93 E-value=3.8e-24 Score=201.99 Aligned_cols=166 Identities=23% Similarity=0.342 Sum_probs=146.0
Q ss_pred EEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeC
Q 018322 159 LRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWN 238 (358)
Q Consensus 159 ~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 238 (358)
.....|.+.|++++|+|++ .+|++|+.||.|+|||+.. ...+..+.+|...|.+++|+
T Consensus 128 ~~~~~~~~~v~~v~~s~~~-~~l~~~~~dg~i~iwd~~~---------------------~~~~~~~~~~~~~v~~~~~~ 185 (401)
T 4aez_A 128 LAETDESTYVASVKWSHDG-SFLSVGLGNGLVDIYDVES---------------------QTKLRTMAGHQARVGCLSWN 185 (401)
T ss_dssp EEECCTTCCEEEEEECTTS-SEEEEEETTSCEEEEETTT---------------------CCEEEEECCCSSCEEEEEEE
T ss_pred eeecCCCCCEEEEEECCCC-CEEEEECCCCeEEEEECcC---------------------CeEEEEecCCCCceEEEEEC
Confidence 3444589999999999988 7999999999999999986 56778888999999999994
Q ss_pred CCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEec
Q 018322 239 PITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKA 318 (358)
Q Consensus 239 ~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~ 318 (358)
+ . +|++|+.||.|++||++...... ..+.+|...|.+++|+|++. +|++|+.||.|++||++++ .++..+..
T Consensus 186 ~--~-~l~~~~~dg~i~i~d~~~~~~~~---~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~v~iwd~~~~-~~~~~~~~ 257 (401)
T 4aez_A 186 R--H-VLSSGSRSGAIHHHDVRIANHQI---GTLQGHSSEVCGLAWRSDGL-QLASGGNDNVVQIWDARSS-IPKFTKTN 257 (401)
T ss_dssp T--T-EEEEEETTSEEEEEETTSSSCEE---EEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTCS-SEEEEECC
T ss_pred C--C-EEEEEcCCCCEEEEecccCccee---eEEcCCCCCeeEEEEcCCCC-EEEEEeCCCeEEEccCCCC-CccEEecC
Confidence 3 4 99999999999999998544433 56788999999999999988 9999999999999999984 57778889
Q ss_pred CCCCeEEEEEeCCCCcEEEEEe--CCCCEEEEeCCCCC
Q 018322 319 HNADVNVISWNRLASCLLASGS--DDGTFSIHDLRLLK 354 (358)
Q Consensus 319 h~~~V~~i~~~p~~~~~lasgs--~Dg~i~iwDlr~~~ 354 (358)
|...|.+++|+|++..++++|+ .||.|++||+++.+
T Consensus 258 ~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~ 295 (401)
T 4aez_A 258 HNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGA 295 (401)
T ss_dssp CSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCC
T ss_pred CcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCC
Confidence 9999999999998878999976 79999999998765
No 60
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.93 E-value=6.6e-25 Score=207.40 Aligned_cols=219 Identities=11% Similarity=0.137 Sum_probs=160.4
Q ss_pred ccCcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCC
Q 018322 65 IGWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDS 144 (358)
Q Consensus 65 ~~wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (358)
..-+..++.|.|++ .+|++|+ .++.|.||++..
T Consensus 138 h~~~v~~~~~~~~~-----------~~l~s~s-----~d~~i~iwd~~~------------------------------- 170 (420)
T 3vl1_A 138 HVSEITKLKFFPSG-----------EALISSS-----QDMQLKIWSVKD------------------------------- 170 (420)
T ss_dssp SSSCEEEEEECTTS-----------SEEEEEE-----TTSEEEEEETTT-------------------------------
T ss_pred ccCccEEEEECCCC-----------CEEEEEe-----CCCeEEEEeCCC-------------------------------
Confidence 34566677777764 4777777 456899998731
Q ss_pred CCccCCCCCCCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcE-
Q 018322 145 DDDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLV- 223 (358)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 223 (358)
.... ..+.+|.+.|++++|+|++ .+|++++.||+|++||+.............. ....+.
T Consensus 171 --------~~~~--~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~--------~~~~v~~ 231 (420)
T 3vl1_A 171 --------GSNP--RTLIGHRATVTDIAIIDRG-RNVLSASLDGTIRLWECGTGTTIHTFNRKEN--------PHDGVNS 231 (420)
T ss_dssp --------CCCC--EEEECCSSCEEEEEEETTT-TEEEEEETTSCEEEEETTTTEEEEEECBTTB--------TTCCEEE
T ss_pred --------CcCc--eEEcCCCCcEEEEEEcCCC-CEEEEEcCCCcEEEeECCCCceeEEeecCCC--------CCCCccE
Confidence 0111 3456899999999999998 7999999999999999986311100000000 000000
Q ss_pred ----------EEcCCCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEE
Q 018322 224 ----------KFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFA 293 (358)
Q Consensus 224 ----------~~~~h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~la 293 (358)
....|...+.+++|+|++. +|++|+.||.|++||+++..... .....|...|.+++|+|++..+|+
T Consensus 232 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~i~d~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~l~ 307 (420)
T 3vl1_A 232 IALFVGTDRQLHEISTSKKNNLEFGTYGK-YVIAGHVSGVITVHNVFSKEQTI---QLPSKFTCSCNSLTVDGNNANYIY 307 (420)
T ss_dssp EEEEECCCSSCGGGCCCCCCTTCSSCTTE-EEEEEETTSCEEEEETTTCCEEE---EECCTTSSCEEEEEECSSCTTEEE
T ss_pred EEEecCCcceeeecccCcccceEEcCCCC-EEEEEcCCCeEEEEECCCCceeE---EcccccCCCceeEEEeCCCCCEEE
Confidence 0112345677778889987 99999999999999998754322 233468899999999999987999
Q ss_pred EEECCCcEEEEECCCCCCeeEEEec-CCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCCC
Q 018322 294 SCSVDGHIAIWDTRVGKSALTSFKA-HNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKV 355 (358)
Q Consensus 294 s~s~Dg~I~iwD~r~~~~~~~~~~~-h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~~ 355 (358)
+|+.||.|++||++++..++..+.. |...|+++.|. ++ .+|++|+.||.|++||++....
T Consensus 308 ~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~-~~-~~l~s~~~d~~v~iw~~~~~~~ 368 (420)
T 3vl1_A 308 AGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFA-AG-ALFVSSGFDTSIKLDIISDPES 368 (420)
T ss_dssp EEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEE-TT-EEEEEETTTEEEEEEEECCTTC
T ss_pred EEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeC-CC-CEEEEecCCccEEEEeccCCCC
Confidence 9999999999999987666777766 67788888665 56 7999999999999999987543
No 61
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.93 E-value=5.3e-24 Score=196.61 Aligned_cols=206 Identities=14% Similarity=0.176 Sum_probs=169.9
Q ss_pred cCcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018322 66 GWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (358)
Q Consensus 66 ~wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (358)
.=+..++.|.|++ .+|++|+ .++.|.||++.
T Consensus 32 ~~~v~~~~~s~~~-----------~~l~~~~-----~dg~i~vwd~~--------------------------------- 62 (369)
T 3zwl_B 32 ERPLTQVKYNKEG-----------DLLFSCS-----KDSSASVWYSL--------------------------------- 62 (369)
T ss_dssp SSCEEEEEECTTS-----------CEEEEEE-----SSSCEEEEETT---------------------------------
T ss_pred eceEEEEEEcCCC-----------CEEEEEe-----CCCEEEEEeCC---------------------------------
Confidence 4567788898875 4778877 45689999862
Q ss_pred CccCCCCCCCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEE
Q 018322 146 DDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF 225 (358)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (358)
.......+.+|.+.|++++|+|++ .+|++++.||.|++||+.. ...+..+
T Consensus 63 --------~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~---------------------~~~~~~~ 112 (369)
T 3zwl_B 63 --------NGERLGTLDGHTGTIWSIDVDCFT-KYCVTGSADYSIKLWDVSN---------------------GQCVATW 112 (369)
T ss_dssp --------TCCEEEEECCCSSCEEEEEECTTS-SEEEEEETTTEEEEEETTT---------------------CCEEEEE
T ss_pred --------CchhhhhhhhcCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCC---------------------CcEEEEe
Confidence 222335667899999999999988 7999999999999999987 4556666
Q ss_pred cCCCCCeEEEEeCCCCCCeEEEEeCC-----CcEEEEecCCCCCcc-------cCCCccccCCC--cEEEEEECCCCCCE
Q 018322 226 GGHKDEGYAIDWNPITTGRLVTGDCN-----SCIYLWEPASDATWN-------VDPNPFIGHSA--SVEDLQWSPTEPDV 291 (358)
Q Consensus 226 ~~h~~~v~~l~~s~~~~~~l~sgs~d-----g~I~lwd~~~~~~~~-------~~~~~~~~h~~--~V~~v~~sp~~~~~ 291 (358)
. |...+.+++|+|++. +|++++.+ |.|++||+....... .....+..|.. .+.+++|+|++. +
T Consensus 113 ~-~~~~v~~~~~~~~~~-~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 189 (369)
T 3zwl_B 113 K-SPVPVKRVEFSPCGN-YFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGK-Y 189 (369)
T ss_dssp E-CSSCEEEEEECTTSS-EEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGC-E
T ss_pred e-cCCCeEEEEEccCCC-EEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCC-E
Confidence 5 788999999999998 99999988 999999997643211 01223445555 899999999998 9
Q ss_pred EEEEECCCcEEEEECCCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 292 FASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 292 las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
|++++.||.|++||++....++..+..|...|.+++|+|++ .+|++++.||.|++||+++.+
T Consensus 190 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~ 251 (369)
T 3zwl_B 190 IIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDL-TYFITSSRDTNSFLVDVSTLQ 251 (369)
T ss_dssp EEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCC
T ss_pred EEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCC-CEEEEecCCceEEEEECCCCc
Confidence 99999999999999998556778888999999999999999 899999999999999999865
No 62
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.93 E-value=1.4e-24 Score=204.76 Aligned_cols=211 Identities=13% Similarity=0.203 Sum_probs=166.5
Q ss_pred cCcceeEEEEe-ccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCC
Q 018322 66 GWPCLSFDIVR-DTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDS 144 (358)
Q Consensus 66 ~wP~ls~~~~~-d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (358)
.-+..++.|.| +. .+|++|+ .++.|.||++..-....
T Consensus 81 ~~~V~~~~~~p~~~-----------~~l~s~s-----~dg~v~vw~~~~~~~~~-------------------------- 118 (402)
T 2aq5_A 81 TAPVLDIAWCPHND-----------NVIASGS-----EDCTVMVWEIPDGGLVL-------------------------- 118 (402)
T ss_dssp SSCEEEEEECTTCT-----------TEEEEEE-----TTSEEEEEECCTTCCSS--------------------------
T ss_pred CCCEEEEEeCCCCC-----------CEEEEEe-----CCCeEEEEEccCCCCcc--------------------------
Confidence 45778999988 43 4777777 45789999884210000
Q ss_pred CCccCCCCCCCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEE
Q 018322 145 DDDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVK 224 (358)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (358)
.. ..+. ..+.+|.+.|++++|+|++..+|++++.||.|+|||+.. ..++..
T Consensus 119 ---~~---~~~~--~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~---------------------~~~~~~ 169 (402)
T 2aq5_A 119 ---PL---REPV--ITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGT---------------------GAAVLT 169 (402)
T ss_dssp ---CB---CSCS--EEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTT---------------------TEEEEE
T ss_pred ---cc---CCce--EEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCC---------------------CCccEE
Confidence 00 0222 455689999999999999867999999999999999987 456677
Q ss_pred E--cCCCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCcc-ccCCCc-EEEEEECCCCCCEEEEE---EC
Q 018322 225 F--GGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPF-IGHSAS-VEDLQWSPTEPDVFASC---SV 297 (358)
Q Consensus 225 ~--~~h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~-~~h~~~-V~~v~~sp~~~~~las~---s~ 297 (358)
+ .+|...|++++|+|++. +|++|+.||.|++||++++.. . ..+ .+|... +.++.|+|++. +|++| +.
T Consensus 170 ~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~~~~ 243 (402)
T 2aq5_A 170 LGPDVHPDTIYSVDWSRDGA-LICTSCRDKRVRVIEPRKGTV-V---AEKDRPHEGTRPVHAVFVSEGK-ILTTGFSRMS 243 (402)
T ss_dssp ECTTTCCSCEEEEEECTTSS-CEEEEETTSEEEEEETTTTEE-E---EEEECSSCSSSCCEEEECSTTE-EEEEEECTTC
T ss_pred EecCCCCCceEEEEECCCCC-EEEEEecCCcEEEEeCCCCce-e---eeeccCCCCCcceEEEEcCCCc-EEEEeccCCC
Confidence 7 78999999999999998 999999999999999987432 2 344 567765 89999999987 88888 78
Q ss_pred CCcEEEEECCCCCCeeEEE-ecCCCCeEEEEEeCCCCcEE-EEEeCCCCEEEEeCCCCC
Q 018322 298 DGHIAIWDTRVGKSALTSF-KAHNADVNVISWNRLASCLL-ASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 298 Dg~I~iwD~r~~~~~~~~~-~~h~~~V~~i~~~p~~~~~l-asgs~Dg~i~iwDlr~~~ 354 (358)
|+.|++||++....++... ..|...|.+++|+|++ .+| ++|+.||.|++||+++.+
T Consensus 244 d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 244 ERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDT-NIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp CEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTT-TEEEEEETTCSCEEEEEECSST
T ss_pred CceEEEEcCccccCCceEEeccCCCceeEEEEcCCC-CEEEEEEcCCCeEEEEEecCCC
Confidence 9999999999865544444 3577889999999999 555 567789999999999876
No 63
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.93 E-value=7.9e-25 Score=208.41 Aligned_cols=175 Identities=16% Similarity=0.254 Sum_probs=135.9
Q ss_pred ecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCC
Q 018322 162 VAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPIT 241 (358)
Q Consensus 162 ~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~ 241 (358)
.+|.+.|++++|+|++ .+|++| .||.|+|||+........... ..+ ..+.+|...|++++|+|++
T Consensus 174 ~~h~~~v~~~~~~~~~-~~l~s~-~d~~i~iwd~~~~~~~~~~~~------------~~~-~~~~~~~~~v~~~~~~p~~ 238 (447)
T 3dw8_B 174 NAHTYHINSISINSDY-ETYLSA-DDLRINLWHLEITDRSFNIVD------------IKP-ANMEELTEVITAAEFHPNS 238 (447)
T ss_dssp SCCSSCCCEEEECTTS-SEEEEE-CSSEEEEEETTEEEEEEEEEE------------CCC-SSGGGCCCCEEEEEECSSC
T ss_pred cCCCcceEEEEEcCCC-CEEEEe-CCCeEEEEECCCCCceeeeee------------ccc-ccccccCcceEEEEECCCC
Confidence 5799999999999988 788888 799999999985211110000 000 1356899999999999998
Q ss_pred CCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCC------------cEEEEEECCCCCCEEEEEECCCcEEEEECCCC
Q 018322 242 TGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSA------------SVEDLQWSPTEPDVFASCSVDGHIAIWDTRVG 309 (358)
Q Consensus 242 ~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~------------~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~ 309 (358)
..+|++|+.||.|++||+++..........+.+|.. .|.+++|+|++. +|++++. +.|+|||++..
T Consensus 239 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~-~~v~iwd~~~~ 316 (447)
T 3dw8_B 239 CNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGR-YMMTRDY-LSVKVWDLNME 316 (447)
T ss_dssp TTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSS-EEEEEES-SEEEEEETTCC
T ss_pred CcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCC-EEEEeeC-CeEEEEeCCCC
Confidence 339999999999999999875432211244556654 999999999998 8999999 99999999974
Q ss_pred CCeeEEEecCCCC---------------eEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 310 KSALTSFKAHNAD---------------VNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 310 ~~~~~~~~~h~~~---------------V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
..++..+..|... +..++|+|++ .+|++|+.||.|+|||+++.+
T Consensus 317 ~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~-~~l~s~s~dg~v~iwd~~~~~ 375 (447)
T 3dw8_B 317 NRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSD-SVVMTGSYNNFFRMFDRNTKR 375 (447)
T ss_dssp SSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTS-SEEEEECSTTEEEEEETTTCC
T ss_pred ccccceeeccccccccccccccccccccceEEEECCCC-CEEEEeccCCEEEEEEcCCCc
Confidence 5677777777542 2348999999 899999999999999998764
No 64
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.93 E-value=4.9e-24 Score=199.73 Aligned_cols=163 Identities=17% Similarity=0.242 Sum_probs=142.2
Q ss_pred ecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcC---C---CCCeEEE
Q 018322 162 VAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGG---H---KDEGYAI 235 (358)
Q Consensus 162 ~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---h---~~~v~~l 235 (358)
..|...|+++.|+|++ +|++++.||.|++||+.. ..++..+.. | ...+.++
T Consensus 183 ~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~---------------------~~~~~~~~~~~~h~~~~~~i~~i 239 (397)
T 1sq9_A 183 MTPSQFATSVDISERG--LIATGFNNGTVQISELST---------------------LRPLYNFESQHSMINNSNSIRSV 239 (397)
T ss_dssp SSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTT---------------------TEEEEEEECCC---CCCCCEEEE
T ss_pred cCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCC---------------------CceeEEEeccccccccCCccceE
Confidence 5589999999999988 899999999999999986 466777888 8 8999999
Q ss_pred EeCCCCCCeEEEEeCC---CcEEEEecCCCCCcccCCCcccc-------------CCCcEEEEEECCCCCCEEEEEECCC
Q 018322 236 DWNPITTGRLVTGDCN---SCIYLWEPASDATWNVDPNPFIG-------------HSASVEDLQWSPTEPDVFASCSVDG 299 (358)
Q Consensus 236 ~~s~~~~~~l~sgs~d---g~I~lwd~~~~~~~~~~~~~~~~-------------h~~~V~~v~~sp~~~~~las~s~Dg 299 (358)
+|+|++. +|++|+.| |.|++||+++... . ..+.+ |...|.+++|+|++. +|++++.||
T Consensus 240 ~~~~~~~-~l~~~~~d~~~g~i~i~d~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg 313 (397)
T 1sq9_A 240 KFSPQGS-LLAIAHDSNSFGCITLYETEFGER-I---GSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGE-TLCSAGWDG 313 (397)
T ss_dssp EECSSTT-EEEEEEEETTEEEEEEEETTTCCE-E---EEECBC--------CCBSBSSCEEEEEECSSSS-EEEEEETTS
T ss_pred EECCCCC-EEEEEecCCCCceEEEEECCCCcc-c---ceeccCcccccccccccccCCcEEEEEECCCCC-EEEEEeCCC
Confidence 9999998 99999999 9999999987432 2 44556 899999999999998 999999999
Q ss_pred cEEEEECCCCCCeeEEEe------cC---------------CCCeEEEEEeCCCC---------cEEEEEeCCCCEEEEe
Q 018322 300 HIAIWDTRVGKSALTSFK------AH---------------NADVNVISWNRLAS---------CLLASGSDDGTFSIHD 349 (358)
Q Consensus 300 ~I~iwD~r~~~~~~~~~~------~h---------------~~~V~~i~~~p~~~---------~~lasgs~Dg~i~iwD 349 (358)
.|+|||++++ .++..+. .| ...|++++|+|++. .+|++|+.||.|+|||
T Consensus 314 ~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~ 392 (397)
T 1sq9_A 314 KLRFWDVKTK-ERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFR 392 (397)
T ss_dssp EEEEEETTTT-EEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEE
T ss_pred eEEEEEcCCC-ceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEE
Confidence 9999999985 5777787 77 99999999999973 5999999999999999
Q ss_pred CCCCC
Q 018322 350 LRLLK 354 (358)
Q Consensus 350 lr~~~ 354 (358)
+++++
T Consensus 393 ~~~g~ 397 (397)
T 1sq9_A 393 EAGGK 397 (397)
T ss_dssp EEC--
T ss_pred cCCCC
Confidence 98753
No 65
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.93 E-value=3.3e-24 Score=211.02 Aligned_cols=161 Identities=21% Similarity=0.387 Sum_probs=143.4
Q ss_pred EEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEe
Q 018322 158 QLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDW 237 (358)
Q Consensus 158 ~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 237 (358)
...+.+|.+.|++++|+|++ .+||+++.|+.|+|||... +.+..+.+|...|++++|
T Consensus 378 ~~~~~~~~~~v~~~~~s~dg-~~l~~~~~d~~v~~~~~~~----------------------~~~~~~~~~~~~v~~~~~ 434 (577)
T 2ymu_A 378 LQTLTGHSSSVRGVAFSPDG-QTIASASDDKTVKLWNRNG----------------------QLLQTLTGHSSSVWGVAF 434 (577)
T ss_dssp EEEEECCSSCEEEEEECTTS-SCEEEEETTSEEEEECTTC----------------------CEEEEEECCSSCEEEEEE
T ss_pred EEEecCCCCCeEEEEECCCC-CEEEEEeCCCEEEEEeCCC----------------------CEEEEecCCCCCeEEEEE
Confidence 35667899999999999999 7899999999999999643 566778899999999999
Q ss_pred CCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEe
Q 018322 238 NPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFK 317 (358)
Q Consensus 238 s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~ 317 (358)
+|++. +|++++.|+.|++||... .. ...+.+|...|.+++|+|++. +|++++.|+.|+|||.. ..++..+.
T Consensus 435 s~d~~-~l~~~~~d~~v~~w~~~~--~~---~~~~~~~~~~v~~~~~spd~~-~las~~~d~~i~iw~~~--~~~~~~~~ 505 (577)
T 2ymu_A 435 SPDDQ-TIASASDDKTVKLWNRNG--QL---LQTLTGHSSSVRGVAFSPDGQ-TIASASDDKTVKLWNRN--GQLLQTLT 505 (577)
T ss_dssp CTTSS-EEEEEETTSEEEEEETTS--CE---EEEEECCSSCEEEEEECTTSC-EEEEEETTSEEEEEETT--SCEEEEEE
T ss_pred CCCCC-EEEEEcCCCEEEEEECCC--CE---EEEEcCCCCCEEEEEEcCCCC-EEEEEeCCCEEEEEcCC--CCEEEEEe
Confidence 99998 999999999999999743 22 256788999999999999998 99999999999999964 35788889
Q ss_pred cCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCC
Q 018322 318 AHNADVNVISWNRLASCLLASGSDDGTFSIHDLR 351 (358)
Q Consensus 318 ~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr 351 (358)
+|...|++|+|+|++ .+||+|+.||.|+|||+.
T Consensus 506 ~h~~~v~~l~~s~dg-~~l~s~~~dg~v~lwd~~ 538 (577)
T 2ymu_A 506 GHSSSVRGVAFSPDG-QTIASASDDKTVKLWNRN 538 (577)
T ss_dssp CCSSCEEEEEECTTS-SCEEEEETTSEEEEECTT
T ss_pred CCCCCEEEEEEcCCC-CEEEEEECcCEEEEEeCC
Confidence 999999999999999 899999999999999963
No 66
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.93 E-value=6.1e-24 Score=203.70 Aligned_cols=169 Identities=17% Similarity=0.153 Sum_probs=141.6
Q ss_pred ecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEc--CCCCCeEEEEeCC
Q 018322 162 VAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG--GHKDEGYAIDWNP 239 (358)
Q Consensus 162 ~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~s~ 239 (358)
.+|.+.|++++|+|++..++|+++.||.|+|||+... ....+..+. .|...|++++|+|
T Consensus 99 ~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~-------------------~~~~~~~~~~~~~~~~v~~~~~sp 159 (450)
T 2vdu_B 99 PPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKT-------------------SKNVLKLRKRFCFSKRPNAISIAE 159 (450)
T ss_dssp -CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSS-------------------SSSCEEEEEEEECSSCEEEEEECT
T ss_pred CccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCC-------------------CCceeeeeecccCCCCceEEEEcC
Confidence 4688899999999999555699999999999999820 034555554 5678999999999
Q ss_pred CCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCC---CCCEEEEEECCCcEEEEECCCCCCeeEE-
Q 018322 240 ITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPT---EPDVFASCSVDGHIAIWDTRVGKSALTS- 315 (358)
Q Consensus 240 ~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~---~~~~las~s~Dg~I~iwD~r~~~~~~~~- 315 (358)
++. +|++|+.+|.|++|++.+..........+.+|...|.+++|+|+ +. +|++|+.|+.|++||++++. ++..
T Consensus 160 ~~~-~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~-~l~s~~~d~~i~vwd~~~~~-~~~~~ 236 (450)
T 2vdu_B 160 DDT-TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQ-FIITSDRDEHIKISHYPQCF-IVDKW 236 (450)
T ss_dssp TSS-EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCE-EEEEEETTSCEEEEEESCTT-CEEEE
T ss_pred CCC-EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCc-EEEEEcCCCcEEEEECCCCc-eeeee
Confidence 998 99999999999999997743321123467889999999999999 77 99999999999999999854 5555
Q ss_pred EecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 316 FKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 316 ~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
+.+|...|++++|+ ++ .+|++|+.|++|+|||+++++
T Consensus 237 ~~~h~~~v~~~~~s-d~-~~l~s~~~d~~v~vwd~~~~~ 273 (450)
T 2vdu_B 237 LFGHKHFVSSICCG-KD-YLLLSAGGDDKIFAWDWKTGK 273 (450)
T ss_dssp CCCCSSCEEEEEEC-ST-TEEEEEESSSEEEEEETTTCC
T ss_pred ecCCCCceEEEEEC-CC-CEEEEEeCCCeEEEEECCCCc
Confidence 56899999999999 88 999999999999999999875
No 67
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.93 E-value=1.7e-24 Score=199.98 Aligned_cols=210 Identities=18% Similarity=0.291 Sum_probs=165.8
Q ss_pred cCcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018322 66 GWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (358)
Q Consensus 66 ~wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (358)
.-+..++.|.|+... ...+|++|+ .++.|.||++.
T Consensus 69 ~~~v~~~~~~~~~~~-------~~~~l~~~~-----~dg~i~v~d~~--------------------------------- 103 (366)
T 3k26_A 69 DENFYTCAWTYDSNT-------SHPLLAVAG-----SRGIIRIINPI--------------------------------- 103 (366)
T ss_dssp TCCEEEEEEEECTTT-------CCEEEEEEE-----TTCEEEEECTT---------------------------------
T ss_pred CCcEEEEEeccCCCC-------CCCEEEEec-----CCCEEEEEEch---------------------------------
Confidence 355788899998421 125777777 45689999762
Q ss_pred CccCCCCCCCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEE
Q 018322 146 DDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF 225 (358)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (358)
.......+.+|.+.|++++|+|.+..+|++++.||.|++||+.. ...+..+
T Consensus 104 --------~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~---------------------~~~~~~~ 154 (366)
T 3k26_A 104 --------TMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT---------------------DTLVAIF 154 (366)
T ss_dssp --------TCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT---------------------TEEEEEE
T ss_pred --------hceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec---------------------CeEEEEe
Confidence 12233456689999999999994448999999999999999986 3555566
Q ss_pred ---cCCCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCccc------------------------CCCccccCCCc
Q 018322 226 ---GGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNV------------------------DPNPFIGHSAS 278 (358)
Q Consensus 226 ---~~h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~------------------------~~~~~~~h~~~ 278 (358)
.+|...|.+++|+|++. +|++|+.||.|++||+++...... ......+|...
T Consensus 155 ~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (366)
T 3k26_A 155 GGVEGHRDEVLSADYDLLGE-KIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNY 233 (366)
T ss_dssp CSTTSCSSCEEEEEECTTSS-EEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSC
T ss_pred cccccccCceeEEEECCCCC-EEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcce
Confidence 68999999999999998 999999999999999976321100 00112238999
Q ss_pred EEEEEECCCCCCEEEEEECCCcEEEEECCCCCC-------------eeEEEecCCCCeEEEEEeCC--CCcEEEEEeCCC
Q 018322 279 VEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKS-------------ALTSFKAHNADVNVISWNRL--ASCLLASGSDDG 343 (358)
Q Consensus 279 V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~-------------~~~~~~~h~~~V~~i~~~p~--~~~~lasgs~Dg 343 (358)
|.+++|+ +. +|++++.||.|++||++.... .+..+..|...|++++|+|+ + .+|++|+.||
T Consensus 234 v~~~~~~--~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-~~l~~~~~dg 309 (366)
T 3k26_A 234 VDCVRWL--GD-LILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQ-KMLALGNQVG 309 (366)
T ss_dssp CCEEEEE--TT-EEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTS-SEEEEECTTS
T ss_pred EEEEEEc--CC-EEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCC-cEEEEEecCC
Confidence 9999998 45 999999999999999987532 35667889999999999999 8 9999999999
Q ss_pred CEEEEeCCCCC
Q 018322 344 TFSIHDLRLLK 354 (358)
Q Consensus 344 ~i~iwDlr~~~ 354 (358)
.|++||+++.+
T Consensus 310 ~i~vwd~~~~~ 320 (366)
T 3k26_A 310 KLYVWDLEVED 320 (366)
T ss_dssp CEEEEECCSSS
T ss_pred cEEEEECCCCC
Confidence 99999998764
No 68
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.93 E-value=8e-24 Score=198.30 Aligned_cols=166 Identities=19% Similarity=0.336 Sum_probs=142.0
Q ss_pred cCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCC
Q 018322 163 AHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITT 242 (358)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~ 242 (358)
+|.+.|++++|+|.+..+|++++.||.|++||+.. ......+. +...+.++.|++.+.
T Consensus 97 ~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~---------------------~~~~~~~~-~~~~~~~~~~~~~~~ 154 (408)
T 4a11_B 97 VHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNT---------------------LQTADVFN-FEETVYSHHMSPVST 154 (408)
T ss_dssp CCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTT---------------------TEEEEEEE-CSSCEEEEEECSSCS
T ss_pred cCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCC---------------------Cccceecc-CCCceeeeEeecCCC
Confidence 59999999999996658999999999999999987 34444443 677899999998643
Q ss_pred C--eEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEE----
Q 018322 243 G--RLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSF---- 316 (358)
Q Consensus 243 ~--~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~---- 316 (358)
. +|++|+.+|.|++||++++.. ...+.+|...|.+++|+|++..+|++|+.||.|++||++....++..+
T Consensus 155 ~~~~~~~~~~~~~v~~~d~~~~~~----~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 230 (408)
T 4a11_B 155 KHCLVAVGTRGPKVQLCDLKSGSC----SHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHN 230 (408)
T ss_dssp SCCEEEEEESSSSEEEEESSSSCC----CEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTT
T ss_pred CCcEEEEEcCCCeEEEEeCCCcce----eeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccc
Confidence 2 899999999999999987433 256778999999999999998789999999999999999865555555
Q ss_pred -----------ecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCCC
Q 018322 317 -----------KAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKV 355 (358)
Q Consensus 317 -----------~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~~ 355 (358)
..|...|++++|+|++ .+|++|+.||.|++||+++.+.
T Consensus 231 ~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~ 279 (408)
T 4a11_B 231 GKKSQAVESANTAHNGKVNGLCFTSDG-LHLLTVGTDNRMRLWNSSNGEN 279 (408)
T ss_dssp TCSCCCTTTSSCSCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCB
T ss_pred cccceeeccccccccCceeEEEEcCCC-CEEEEecCCCeEEEEECCCCcc
Confidence 5788999999999999 9999999999999999998764
No 69
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.93 E-value=2.6e-24 Score=219.49 Aligned_cols=208 Identities=20% Similarity=0.248 Sum_probs=171.0
Q ss_pred CcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018322 67 WPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDD 146 (358)
Q Consensus 67 wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (358)
=+..++.|-|++ .+|++|+ .++.|.||++.+
T Consensus 10 ~~V~~l~~s~dg-----------~~latg~-----~dg~I~vwd~~~--------------------------------- 40 (753)
T 3jro_A 10 ELIHDAVLDYYG-----------KRLATCS-----SDKTIKIFEVEG--------------------------------- 40 (753)
T ss_dssp CCEEEECCCSSS-----------CCEEEEE-----TTTEEEEEEEET---------------------------------
T ss_pred ceeEEEEECCCC-----------CeEEEEE-----CCCcEEEEecCC---------------------------------
Confidence 356677777774 4777787 456999999841
Q ss_pred ccCCCCCCCeEEEEEecCCCceeEEEEcCC--CCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEE
Q 018322 147 DEEGGSGTPILQLRKVAHQGCVNRIRAMTQ--NPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVK 224 (358)
Q Consensus 147 ~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~--~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (358)
........+.+|.+.|++++|+|. + .+|++|+.||.|++||+... ....+..
T Consensus 41 ------~~~~~~~~l~~h~~~V~~l~~s~~~~~-~~l~s~s~Dg~I~vwd~~~~-------------------~~~~~~~ 94 (753)
T 3jro_A 41 ------ETHKLIDTLTGHEGPVWRVDWAHPKFG-TILASCSYDGKVLIWKEENG-------------------RWSQIAV 94 (753)
T ss_dssp ------TEEEEEEEECCCSSCEEEEEECCTTSC-SEEEEEETTSCEEEEEEETT-------------------EEEEEEE
T ss_pred ------CCCccceeccCCcCceEEEEecCCCCC-CEEEEEeCCCeEEEEECCCC-------------------ccccccc
Confidence 123444667789999999999987 5 79999999999999998762 1125677
Q ss_pred EcCCCCCeEEEEeCCC--CCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCC-------------CC
Q 018322 225 FGGHKDEGYAIDWNPI--TTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPT-------------EP 289 (358)
Q Consensus 225 ~~~h~~~v~~l~~s~~--~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~-------------~~ 289 (358)
+.+|...|++++|+|+ +. +|++|+.||.|++||++...... ...+.+|...|.+++|+|. +.
T Consensus 95 ~~~h~~~V~~v~~sp~~~~~-~l~sgs~dg~I~vwdl~~~~~~~--~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~ 171 (753)
T 3jro_A 95 HAVHSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENGTTS--PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESR 171 (753)
T ss_dssp ECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCSSSCCC--CEEEECCSSCEEEEEECCCC---------CGGGC
T ss_pred ccCCCCCeEEEEECCCCCCC-EEEEEeCCCcEEEEEeecCCCcc--eeEeecCCCceEEEEecCcccccccccccCCCCC
Confidence 8899999999999999 76 99999999999999998753322 2456789999999999995 55
Q ss_pred CEEEEEECCCcEEEEECCCCC---CeeEEEecCCCCeEEEEEeCC---CCcEEEEEeCCCCEEEEeCCCCC
Q 018322 290 DVFASCSVDGHIAIWDTRVGK---SALTSFKAHNADVNVISWNRL---ASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 290 ~~las~s~Dg~I~iwD~r~~~---~~~~~~~~h~~~V~~i~~~p~---~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
+|++|+.||.|++||++.+. .+...+.+|...|++++|+|+ + .+|++|+.||.|++||+++.+
T Consensus 172 -~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~-~~l~s~s~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 172 -KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLR-SYLASVSQDRTCIIWTQDNEQ 240 (753)
T ss_dssp -CEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSS-EEEEEEESSSCEEEEEESSSS
T ss_pred -EEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCC-CEEEEEecCCEEEEecCCCCC
Confidence 89999999999999999854 244567889999999999999 6 999999999999999999864
No 70
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.93 E-value=2.3e-23 Score=197.92 Aligned_cols=173 Identities=22% Similarity=0.376 Sum_probs=135.0
Q ss_pred eEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEE
Q 018322 156 ILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAI 235 (358)
Q Consensus 156 ~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 235 (358)
.......+|...|.++.+++ .++++|+.|+.+++||... ....+..+.+|...+.++
T Consensus 180 ~~~~~~~~h~~~v~~~s~~~---~~l~sgs~d~~i~~~d~~~--------------------~~~~~~~~~~h~~~~~~~ 236 (420)
T 4gga_A 180 KRLRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRV--------------------AEHHVATLSGHSQEVCGL 236 (420)
T ss_dssp EEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTS--------------------SSCEEEEEECCSSCEEEE
T ss_pred cEEEEEeCCCCceEEEeeCC---CEEEEEeCCCceeEeeecc--------------------cceeeEEecccccceeee
Confidence 44466788999999998864 6899999999999999887 346667889999999999
Q ss_pred EeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEE--CCCcEEEEEC-------
Q 018322 236 DWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCS--VDGHIAIWDT------- 306 (358)
Q Consensus 236 ~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s--~Dg~I~iwD~------- 306 (358)
.|+|.+. +|++++.|+.|++|+...+............|...|.+++|+|.+..++++++ .|++|+|||+
T Consensus 237 ~~~~~g~-~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~ 315 (420)
T 4gga_A 237 RWAPDGR-HLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLS 315 (420)
T ss_dssp EECTTSS-EEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEE
T ss_pred eecCCCC-eeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccce
Confidence 9999998 99999999999999997743322222344556667777777766555555432 4555555554
Q ss_pred ------------------------------------CCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeC
Q 018322 307 ------------------------------------RVGKSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDL 350 (358)
Q Consensus 307 ------------------------------------r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDl 350 (358)
+++ .++..+.+|...|++|+|+|++ .+|+||+.||+|+|||+
T Consensus 316 ~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~-~~v~~l~gH~~~V~~l~~spdg-~~l~S~s~D~tvriWdv 393 (420)
T 4gga_A 316 AVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM-AKVAELKGHTSRVLSLTMSPDG-ATVASAAADETLRLWRC 393 (420)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC-CEEEEECCCSSCEEEEEECTTS-SCEEEEETTTEEEEECC
T ss_pred eeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCC-cEEEEEcCCCCCEEEEEEcCCC-CEEEEEecCCeEEEEEC
Confidence 442 3566778899999999999999 89999999999999999
Q ss_pred CCCC
Q 018322 351 RLLK 354 (358)
Q Consensus 351 r~~~ 354 (358)
....
T Consensus 394 ~~~~ 397 (420)
T 4gga_A 394 FELD 397 (420)
T ss_dssp SCSS
T ss_pred CCCC
Confidence 7643
No 71
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.93 E-value=3.9e-24 Score=195.83 Aligned_cols=168 Identities=17% Similarity=0.229 Sum_probs=137.6
Q ss_pred EEEEEecCCCceeEEEEcCCC-CcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEE
Q 018322 157 LQLRKVAHQGCVNRIRAMTQN-PHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAI 235 (358)
Q Consensus 157 ~~~~~~~H~~~V~~i~~~p~~-~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 235 (358)
......+|...|+.++|++.+ ..++++++.|+.|++||+.. ...+..+.+|...|++|
T Consensus 163 ~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~---------------------~~~~~~~~~h~~~v~~~ 221 (340)
T 4aow_A 163 YTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN---------------------CKLKTNHIGHTGYLNTV 221 (340)
T ss_dssp EEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTT---------------------TEEEEEECCCSSCEEEE
T ss_pred EEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCC---------------------CceeeEecCCCCcEEEE
Confidence 345567799999999999876 35789999999999999987 56677889999999999
Q ss_pred EeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEE
Q 018322 236 DWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTS 315 (358)
Q Consensus 236 ~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~ 315 (358)
+|+|++. +|++|+.||.|++||+++... . ..+. +...|.+++|+|++. +++++.|+.|+|||++.. ..+..
T Consensus 222 ~~s~~~~-~l~s~s~Dg~i~iwd~~~~~~-~---~~~~-~~~~v~~~~~~~~~~--~~~~~~d~~i~iwd~~~~-~~~~~ 292 (340)
T 4aow_A 222 TVSPDGS-LCASGGKDGQAMLWDLNEGKH-L---YTLD-GGDIINALCFSPNRY--WLCAATGPSIKIWDLEGK-IIVDE 292 (340)
T ss_dssp EECTTSS-EEEEEETTCEEEEEETTTTEE-E---EEEE-CSSCEEEEEECSSSS--EEEEEETTEEEEEETTTT-EEEEE
T ss_pred EECCCCC-EEEEEeCCCeEEEEEeccCce-e---eeec-CCceEEeeecCCCCc--eeeccCCCEEEEEECCCC-eEEEe
Confidence 9999998 999999999999999987432 2 2333 456899999999875 667778999999999873 23322
Q ss_pred ---------EecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCCC
Q 018322 316 ---------FKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKV 355 (358)
Q Consensus 316 ---------~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~~ 355 (358)
..+|...|++++|+|++ .+|++|+.||.|+|||++++++
T Consensus 293 ~~~~~~~~~~~~h~~~v~~l~~s~dg-~~l~sgs~Dg~v~iW~~~tGtr 340 (340)
T 4aow_A 293 LKQEVISTSSKAEPPQCTSLAWSADG-QTLFAGYTDNLVRVWQVTIGTR 340 (340)
T ss_dssp ECCC-------CCCCCEEEEEECTTS-SEEEEEETTSCEEEEEEEC---
T ss_pred ccccceeeeccCCCCCEEEEEECCCC-CEEEEEeCCCEEEEEeCCCcCC
Confidence 35788999999999999 8999999999999999998764
No 72
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.93 E-value=1.3e-24 Score=202.60 Aligned_cols=208 Identities=13% Similarity=0.128 Sum_probs=157.9
Q ss_pred cCcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018322 66 GWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (358)
Q Consensus 66 ~wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (358)
.-+..++.|.|++ .+|++|+ .++.|.||++..-
T Consensus 55 ~~~v~~~~~s~~~-----------~~l~s~s-----~d~~v~vwd~~~~------------------------------- 87 (377)
T 3dwl_C 55 DKIVTCVDWAPKS-----------NRIVTCS-----QDRNAYVYEKRPD------------------------------- 87 (377)
T ss_dssp SSCEEEEEECTTT-----------CCEEEEE-----TTSSEEEC------------------------------------
T ss_pred CceEEEEEEeCCC-----------CEEEEEe-----CCCeEEEEEcCCC-------------------------------
Confidence 4567888898874 4777777 4568999987310
Q ss_pred CccCCCCCCCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEE
Q 018322 146 DDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF 225 (358)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (358)
...........|.+.|++++|+|++ .+|++++.||.|++||+.... .......+
T Consensus 88 -------~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~------------------~~~~~~~~ 141 (377)
T 3dwl_C 88 -------GTWKQTLVLLRLNRAATFVRWSPNE-DKFAVGSGARVISVCYFEQEN------------------DWWVSKHL 141 (377)
T ss_dssp --------CCCCEEECCCCSSCEEEEECCTTS-SCCEEEESSSCEEECCC-----------------------CCCCEEE
T ss_pred -------CceeeeeEecccCCceEEEEECCCC-CEEEEEecCCeEEEEEECCcc------------------cceeeeEe
Confidence 0011234566899999999999988 789999999999999998721 01245667
Q ss_pred cC-CCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCC--------------cccCCCccccCCCcEEEEEECCCCCC
Q 018322 226 GG-HKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDAT--------------WNVDPNPFIGHSASVEDLQWSPTEPD 290 (358)
Q Consensus 226 ~~-h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~--------------~~~~~~~~~~h~~~V~~v~~sp~~~~ 290 (358)
.+ |...|++++|+|++. +|++|+.|+.|++||+..... .......+ +|...|.+++|+|++.
T Consensus 142 ~~~h~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~- 218 (377)
T 3dwl_C 142 KRPLRSTILSLDWHPNNV-LLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGN- 218 (377)
T ss_dssp CSSCCSCEEEEEECTTSS-EEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSS-
T ss_pred ecccCCCeEEEEEcCCCC-EEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCC-
Confidence 77 999999999999998 999999999999999963210 01112334 8999999999999998
Q ss_pred EEEEEECCCcEEEEECCCCCCe---eEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCC
Q 018322 291 VFASCSVDGHIAIWDTRVGKSA---LTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLR 351 (358)
Q Consensus 291 ~las~s~Dg~I~iwD~r~~~~~---~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr 351 (358)
+|++++.||.|+|||++++..+ +..+..|...|++++|+|++ .+|++|+.++.+ +|+..
T Consensus 219 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 219 ALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANES-AIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp CEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETT-EEEEEESSSSEE-EECCC
T ss_pred EEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCC-CEEEEEcCCcEE-EEEeC
Confidence 9999999999999999986431 66778999999999999999 899998766555 77765
No 73
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.93 E-value=3.1e-23 Score=189.80 Aligned_cols=210 Identities=19% Similarity=0.279 Sum_probs=172.2
Q ss_pred cCcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018322 66 GWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (358)
Q Consensus 66 ~wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (358)
.=+..++.|.|+.. .+|+.|. .++.|.||++....
T Consensus 38 ~~~V~~v~~sp~~~----------~~l~S~s-----~D~~i~vWd~~~~~------------------------------ 72 (340)
T 4aow_A 38 NGWVTQIATTPQFP----------DMILSAS-----RDKTIIMWKLTRDE------------------------------ 72 (340)
T ss_dssp SSCEEEEEECTTCT----------TEEEEEE-----TTSCEEEEEECCSS------------------------------
T ss_pred cCCEEEEEEeCCCC----------CEEEEEc-----CCCeEEEEECCCCC------------------------------
Confidence 34677889988731 3777777 56789999984100
Q ss_pred CccCCCCCCCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEE
Q 018322 146 DDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF 225 (358)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (358)
. ........+.+|.+.|+++.|+|++ .+|++++.||.|++|+... .......
T Consensus 73 ---~---~~~~~~~~l~~h~~~V~~~~~s~dg-~~l~s~~~d~~i~~~~~~~---------------------~~~~~~~ 124 (340)
T 4aow_A 73 ---T---NYGIPQRALRGHSHFVSDVVISSDG-QFALSGSWDGTLRLWDLTT---------------------GTTTRRF 124 (340)
T ss_dssp ---S---CSEEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTT---------------------TEEEEEE
T ss_pred ---c---ccceeeEEEeCCCCCEEEEEECCCC-CEEEEEcccccceEEeecc---------------------cceeeee
Confidence 0 1334446678999999999999999 7999999999999999987 3445566
Q ss_pred cCCCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCC-CEEEEEECCCcEEEE
Q 018322 226 GGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEP-DVFASCSVDGHIAIW 304 (358)
Q Consensus 226 ~~h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~-~~las~s~Dg~I~iw 304 (358)
..+...+..+.+++.+. +|++|+.|+.+++||+....... ....+|...|..++|++++. .++++++.|+.|++|
T Consensus 125 ~~~~~~~~~~~~~~~~~-~l~s~s~d~~~~~~d~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~ 200 (340)
T 4aow_A 125 VGHTKDVLSVAFSSDNR-QIVSGSRDKTIKLWNTLGVCKYT---VQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 200 (340)
T ss_dssp ECCSSCEEEEEECTTSS-CEEEEETTSCEEEECTTSCEEEE---ECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEE
T ss_pred cCCCCceeEEEEeecCc-cceeecCCCeEEEEEeCCCceEE---EEeccccCcccceEEccCCCCcEEEEEcCCCEEEEE
Confidence 67788899999999998 99999999999999987643322 34567999999999998753 378999999999999
Q ss_pred ECCCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 305 DTRVGKSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 305 D~r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
|++.+ .++..+.+|...|++|+|+|++ .+|++|+.||.|++||+++.+
T Consensus 201 d~~~~-~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~Dg~i~iwd~~~~~ 248 (340)
T 4aow_A 201 NLANC-KLKTNHIGHTGYLNTVTVSPDG-SLCASGGKDGQAMLWDLNEGK 248 (340)
T ss_dssp ETTTT-EEEEEECCCSSCEEEEEECTTS-SEEEEEETTCEEEEEETTTTE
T ss_pred ECCCC-ceeeEecCCCCcEEEEEECCCC-CEEEEEeCCCeEEEEEeccCc
Confidence 99984 5777889999999999999999 899999999999999998764
No 74
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.93 E-value=5e-24 Score=199.38 Aligned_cols=174 Identities=18% Similarity=0.157 Sum_probs=145.8
Q ss_pred CCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEE--cCCCCC
Q 018322 154 TPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF--GGHKDE 231 (358)
Q Consensus 154 ~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~ 231 (358)
...+...+.+|.+.|++++|+|+++.+||+|+.||.|+|||+.. ......+ .+|...
T Consensus 62 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~---------------------~~~~~~~~~~~h~~~ 120 (383)
T 3ei3_B 62 SYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDV---------------------QNKTSFIQGMGPGDA 120 (383)
T ss_dssp TCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTS---------------------TTCEEEECCCSTTCB
T ss_pred ccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCC---------------------cccceeeecCCcCCc
Confidence 34455677899999999999999877999999999999999986 2333444 379999
Q ss_pred eEEEEeCC-CCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCC
Q 018322 232 GYAIDWNP-ITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGK 310 (358)
Q Consensus 232 v~~l~~s~-~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~ 310 (358)
|++++|+| ++. +|++|+.|+.|++||+.. .. ........+|...|.+++|+|++. +|++|+.|+.|++||++.
T Consensus 121 v~~~~~~~~~~~-~l~s~~~d~~i~iwd~~~-~~-~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~-- 194 (383)
T 3ei3_B 121 ITGMKFNQFNTN-QLFVSSIRGATTLRDFSG-SV-IQVFAKTDSWDYWYCCVDVSVSRQ-MLATGDSTGRLLLLGLDG-- 194 (383)
T ss_dssp EEEEEEETTEEE-EEEEEETTTEEEEEETTS-CE-EEEEECCCCSSCCEEEEEEETTTT-EEEEEETTSEEEEEETTS--
T ss_pred eeEEEeCCCCCC-EEEEEeCCCEEEEEECCC-Cc-eEEEeccCCCCCCeEEEEECCCCC-EEEEECCCCCEEEEECCC--
Confidence 99999999 455 999999999999999975 22 211122334568899999999998 999999999999999953
Q ss_pred CeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 311 SALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 311 ~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
.++..+..|...|++++|+|++..+|++|+.|+.|++||+++.+
T Consensus 195 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 238 (383)
T 3ei3_B 195 HEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIK 238 (383)
T ss_dssp CEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCC
T ss_pred CEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCC
Confidence 57888899999999999999994499999999999999999754
No 75
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.92 E-value=1.5e-23 Score=193.00 Aligned_cols=210 Identities=18% Similarity=0.260 Sum_probs=163.3
Q ss_pred ccCcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCC
Q 018322 65 IGWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDS 144 (358)
Q Consensus 65 ~~wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (358)
..-+..++.|.|++. .++++|+.. ..++.|.||++..
T Consensus 17 h~~~v~~~~~~p~~~----------~l~~~~s~~--~~d~~v~iw~~~~------------------------------- 53 (357)
T 3i2n_A 17 FNYTVFDCKWVPCSA----------KFVTMGNFA--RGTGVIQLYEIQH------------------------------- 53 (357)
T ss_dssp CSSCEEEEEECTTSS----------EEEEEEC----CCCEEEEEEEECS-------------------------------
T ss_pred CCCceEEEEEcCCCc----------eEEEecCcc--CCCcEEEEEeCCC-------------------------------
Confidence 345778999998752 455666532 1367999998831
Q ss_pred CCccCCCCCCCeEEEEEecCCCceeEEEEcCCC--CcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCc
Q 018322 145 DDDEEGGSGTPILQLRKVAHQGCVNRIRAMTQN--PHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPL 222 (358)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~--~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (358)
.........+|.+.|++++|+|++ ..+|++++.||.|++||+.. ...++
T Consensus 54 ---------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~--------------------~~~~~ 104 (357)
T 3i2n_A 54 ---------GDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEA--------------------PEMPV 104 (357)
T ss_dssp ---------SSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTS--------------------CSSCS
T ss_pred ---------CcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCC--------------------CCccE
Confidence 223334455899999999999983 37999999999999999987 22377
Q ss_pred EEEcCCCCCeEEEEe------CCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccC----CCcEEEEE----ECCCC
Q 018322 223 VKFGGHKDEGYAIDW------NPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGH----SASVEDLQ----WSPTE 288 (358)
Q Consensus 223 ~~~~~h~~~v~~l~~------s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h----~~~V~~v~----~sp~~ 288 (358)
..+.+|...|.+++| +|++. +|++|+.||.|++||++...... ..+..| ...|.+++ |+|++
T Consensus 105 ~~~~~~~~~v~~~~~~~~~~~s~~~~-~l~~~~~d~~i~vwd~~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~ 180 (357)
T 3i2n_A 105 YSVKGHKEIINAIDGIGGLGIGEGAP-EIVTGSRDGTVKVWDPRQKDDPV---ANMEPVQGENKRDCWTVAFGNAYNQEE 180 (357)
T ss_dssp EEECCCSSCEEEEEEESGGGCC-CCC-EEEEEETTSCEEEECTTSCSSCS---EEECCCTTSCCCCEEEEEEECCCC-CC
T ss_pred EEEEecccceEEEeeccccccCCCcc-EEEEEeCCCeEEEEeCCCCCCcc---eeccccCCCCCCceEEEEEEeccCCCC
Confidence 889999999999965 67787 99999999999999998754222 333333 34899998 78888
Q ss_pred CCEEEEEECCCcEEEEECCCCCCeeEEEecCCCCeEEEEEeC---CCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 289 PDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNR---LASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 289 ~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~~p---~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
. +|++++.||.|++||++.+. ......|...|++++|+| ++ .+|++|+.||.|++||+++.+
T Consensus 181 ~-~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~v~~~~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~ 245 (357)
T 3i2n_A 181 R-VVCAGYDNGDIKLFDLRNMA--LRWETNIKNGVCSLEFDRKDISM-NKLVATSLEGKFHVFDMRTQH 245 (357)
T ss_dssp C-EEEEEETTSEEEEEETTTTE--EEEEEECSSCEEEEEESCSSSSC-CEEEEEESTTEEEEEEEEEEE
T ss_pred C-EEEEEccCCeEEEEECccCc--eeeecCCCCceEEEEcCCCCCCC-CEEEEECCCCeEEEEeCcCCC
Confidence 8 99999999999999999843 344577899999999999 77 899999999999999998653
No 76
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.92 E-value=1.5e-23 Score=194.32 Aligned_cols=209 Identities=12% Similarity=0.076 Sum_probs=165.3
Q ss_pred cCcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018322 66 GWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (358)
Q Consensus 66 ~wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (358)
.-+..++.|.|++ .+|++|+ .++.|.||++..
T Consensus 52 ~~~v~~~~~~~~~-----------~~l~~~~-----~dg~i~vwd~~~-------------------------------- 83 (372)
T 1k8k_C 52 NGQVTGVDWAPDS-----------NRIVTCG-----TDRNAYVWTLKG-------------------------------- 83 (372)
T ss_dssp SSCEEEEEEETTT-----------TEEEEEE-----TTSCEEEEEEET--------------------------------
T ss_pred CCcccEEEEeCCC-----------CEEEEEc-----CCCeEEEEECCC--------------------------------
Confidence 4467788888874 3777777 456899998841
Q ss_pred CccCCCCCCCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEE
Q 018322 146 DDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF 225 (358)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (358)
...........|.+.|+++.|+|++ .+|++++.+|.|++||+...... .......
T Consensus 84 -------~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~i~d~~~~~~~-----------------~~~~~~~ 138 (372)
T 1k8k_C 84 -------RTWKPTLVILRINRAARCVRWAPNE-KKFAVGSGSRVISICYFEQENDW-----------------WVCKHIK 138 (372)
T ss_dssp -------TEEEEEEECCCCSSCEEEEEECTTS-SEEEEEETTSSEEEEEEETTTTE-----------------EEEEEEC
T ss_pred -------CeeeeeEEeecCCCceeEEEECCCC-CEEEEEeCCCEEEEEEecCCCcc-----------------eeeeeee
Confidence 1223334557799999999999998 79999999999999999762100 0012233
Q ss_pred cCCCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCC--------------cccCCCccccCCCcEEEEEECCCCCCE
Q 018322 226 GGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDAT--------------WNVDPNPFIGHSASVEDLQWSPTEPDV 291 (358)
Q Consensus 226 ~~h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~--------------~~~~~~~~~~h~~~V~~v~~sp~~~~~ 291 (358)
.+|...+.+++|+|++. +|++|+.||.|++||++.... .......+.+|...|.+++|+|++. +
T Consensus 139 ~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~ 216 (372)
T 1k8k_C 139 KPIRSTVLSLDWHPNSV-LLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGS-R 216 (372)
T ss_dssp TTCCSCEEEEEECTTSS-EEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSS-E
T ss_pred cccCCCeeEEEEcCCCC-EEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCC-E
Confidence 67889999999999998 999999999999999752100 0011244568999999999999998 9
Q ss_pred EEEEECCCcEEEEECCCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCC
Q 018322 292 FASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRL 352 (358)
Q Consensus 292 las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~ 352 (358)
|++++.||.|++||++++ .++..+..|...|++++|+|++ .+|++| .|+.|++|+++.
T Consensus 217 l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~~~~-~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 217 VAWVSHDSTVCLADADKK-MAVATLASETLPLLAVTFITES-SLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEEEETTTEEEEEEGGGT-TEEEEEECSSCCEEEEEEEETT-EEEEEE-TTSSCEEEEEET
T ss_pred EEEEeCCCEEEEEECCCC-ceeEEEccCCCCeEEEEEecCC-CEEEEE-eCCeEEEEEccC
Confidence 999999999999999985 5788889999999999999999 788877 899999999987
No 77
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.92 E-value=5.9e-24 Score=214.80 Aligned_cols=175 Identities=21% Similarity=0.258 Sum_probs=147.3
Q ss_pred eEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEE
Q 018322 156 ILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAI 235 (358)
Q Consensus 156 ~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 235 (358)
.+...+.+|.+.|++|+|+|++..+|+||+.||+|+||++...... .......+.+|...|.++
T Consensus 373 ~~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~----------------~~~~~~~~~~h~~~v~~v 436 (694)
T 3dm0_A 373 VLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKA----------------YGVAQRRLTGHSHFVEDV 436 (694)
T ss_dssp EEEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTC----------------SCEEEEEEECCSSCEEEE
T ss_pred chhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcc----------------cccccceecCCCCcEEEE
Confidence 3445678999999999999988789999999999999999763111 123456788999999999
Q ss_pred EeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEE
Q 018322 236 DWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTS 315 (358)
Q Consensus 236 ~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~ 315 (358)
+|+|++. +|++|+.||+|+|||+.++ .. ...+.+|...|.+++|+|++. .|++|+.|++|+|||++.. +...
T Consensus 437 ~~s~~g~-~l~sgs~Dg~v~vwd~~~~-~~---~~~~~~h~~~v~~~~~s~~~~-~l~s~s~D~~i~iwd~~~~--~~~~ 508 (694)
T 3dm0_A 437 VLSSDGQ-FALSGSWDGELRLWDLAAG-VS---TRRFVGHTKDVLSVAFSLDNR-QIVSASRDRTIKLWNTLGE--CKYT 508 (694)
T ss_dssp EECTTSS-EEEEEETTSEEEEEETTTT-EE---EEEEECCSSCEEEEEECTTSS-CEEEEETTSCEEEECTTSC--EEEE
T ss_pred EECCCCC-EEEEEeCCCcEEEEECCCC-cc---eeEEeCCCCCEEEEEEeCCCC-EEEEEeCCCEEEEEECCCC--ccee
Confidence 9999998 9999999999999999773 22 256789999999999999998 8999999999999998753 3333
Q ss_pred E----ecCCCCeEEEEEeCCCC-cEEEEEeCCCCEEEEeCCCCC
Q 018322 316 F----KAHNADVNVISWNRLAS-CLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 316 ~----~~h~~~V~~i~~~p~~~-~~lasgs~Dg~i~iwDlr~~~ 354 (358)
+ .+|...|++++|+|++. .+|++|+.||+|+|||+++.+
T Consensus 509 ~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~ 552 (694)
T 3dm0_A 509 ISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCK 552 (694)
T ss_dssp ECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCC
T ss_pred eccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCc
Confidence 3 46888999999999862 589999999999999998764
No 78
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.92 E-value=4.9e-23 Score=187.90 Aligned_cols=210 Identities=15% Similarity=0.255 Sum_probs=168.7
Q ss_pred ccccCcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCC
Q 018322 63 FHIGWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDE 142 (358)
Q Consensus 63 ~~~~wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (358)
....-+..++.|.|++ .++++|+ ++.|.||++..-.
T Consensus 48 ~~h~~~v~~~~~~~~~-----------~~l~~~~------dg~i~iw~~~~~~--------------------------- 83 (337)
T 1gxr_A 48 LNHGEVVCAVTISNPT-----------RHVYTGG------KGCVKVWDISHPG--------------------------- 83 (337)
T ss_dssp ECCSSCCCEEEECSSS-----------SEEEEEC------BSEEEEEETTSTT---------------------------
T ss_pred ccCCCceEEEEEecCC-----------cEEEEcC------CCeEEEEECCCCC---------------------------
Confidence 3446677788888774 3666664 3589999873100
Q ss_pred CCCCccCCCCCCCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCc
Q 018322 143 DSDDDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPL 222 (358)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (358)
...+.......+|.+.|+++.|+|++ .+|++++.||.|++||+... .....
T Consensus 84 ---------~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~-------------------~~~~~ 134 (337)
T 1gxr_A 84 ---------NKSPVSQLDCLNRDNYIRSCKLLPDG-CTLIVGGEASTLSIWDLAAP-------------------TPRIK 134 (337)
T ss_dssp ---------CCSCSEEEECSCTTSBEEEEEECTTS-SEEEEEESSSEEEEEECCCC---------------------EEE
T ss_pred ---------ceeeeecccccCCCCcEEEEEEcCCC-CEEEEEcCCCcEEEEECCCC-------------------Cccee
Confidence 01334445555899999999999988 79999999999999999872 11245
Q ss_pred EEEcCCCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEE
Q 018322 223 VKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIA 302 (358)
Q Consensus 223 ~~~~~h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~ 302 (358)
..+.+|...+.+++|+|++. +|++|+.+|.|++||+++. ... ..+.+|...|.+++|+|++. .|++++.||.|+
T Consensus 135 ~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~v~~~d~~~~-~~~---~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~ 208 (337)
T 1gxr_A 135 AELTSSAPACYALAISPDSK-VCFSCCSDGNIAVWDLHNQ-TLV---RQFQGHTDGASCIDISNDGT-KLWTGGLDNTVR 208 (337)
T ss_dssp EEEECSSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTT-EEE---EEECCCSSCEEEEEECTTSS-EEEEEETTSEEE
T ss_pred eecccCCCceEEEEECCCCC-EEEEEeCCCcEEEEeCCCC-cee---eeeecccCceEEEEECCCCC-EEEEEecCCcEE
Confidence 66788999999999999998 9999999999999999874 322 45677999999999999998 999999999999
Q ss_pred EEECCCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 303 IWDTRVGKSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 303 iwD~r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
+||++.+ ..+..+ .|...+.+++|+|++ .+|++++.+|.|++||+++.+
T Consensus 209 ~~d~~~~-~~~~~~-~~~~~v~~~~~s~~~-~~l~~~~~~~~i~~~~~~~~~ 257 (337)
T 1gxr_A 209 SWDLREG-RQLQQH-DFTSQIFSLGYCPTG-EWLAVGMESSNVEVLHVNKPD 257 (337)
T ss_dssp EEETTTT-EEEEEE-ECSSCEEEEEECTTS-SEEEEEETTSCEEEEETTSSC
T ss_pred EEECCCC-ceEeee-cCCCceEEEEECCCC-CEEEEEcCCCcEEEEECCCCC
Confidence 9999984 344444 578889999999999 899999999999999998764
No 79
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.92 E-value=1.5e-23 Score=197.82 Aligned_cols=165 Identities=20% Similarity=0.390 Sum_probs=140.6
Q ss_pred EEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEe
Q 018322 158 QLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDW 237 (358)
Q Consensus 158 ~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 237 (358)
...+.+|.+.|.++.|++ .++++++.||.|++||+.. ....+..+.+|...|.+++|
T Consensus 169 ~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~i~d~~~--------------------~~~~~~~~~~~~~~v~~~~~ 225 (401)
T 4aez_A 169 LRTMAGHQARVGCLSWNR---HVLSSGSRSGAIHHHDVRI--------------------ANHQIGTLQGHSSEVCGLAW 225 (401)
T ss_dssp EEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTS--------------------SSCEEEEEECCSSCEEEEEE
T ss_pred EEEecCCCCceEEEEECC---CEEEEEcCCCCEEEEeccc--------------------CcceeeEEcCCCCCeeEEEE
Confidence 355668999999999953 6999999999999999985 24667788899999999999
Q ss_pred CCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEE--CCCcEEEEECCCCCCeeEE
Q 018322 238 NPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCS--VDGHIAIWDTRVGKSALTS 315 (358)
Q Consensus 238 s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s--~Dg~I~iwD~r~~~~~~~~ 315 (358)
+|++. +|++|+.||.|++||+++. ... ..+..|...|.+++|+|++..++++|+ .|+.|++||++++ .++..
T Consensus 226 ~~~~~-~l~s~~~d~~v~iwd~~~~-~~~---~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~-~~~~~ 299 (401)
T 4aez_A 226 RSDGL-QLASGGNDNVVQIWDARSS-IPK---FTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATG-ARVNT 299 (401)
T ss_dssp CTTSS-EEEEEETTSCEEEEETTCS-SEE---EEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTC-CEEEE
T ss_pred cCCCC-EEEEEeCCCeEEEccCCCC-Ccc---EEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCC-CEEEE
Confidence 99987 9999999999999999873 322 456779999999999999887999987 8999999999985 46666
Q ss_pred EecCCCCeEEEEEeCCCCcEEEE--EeCCCCEEEEeCCCC
Q 018322 316 FKAHNADVNVISWNRLASCLLAS--GSDDGTFSIHDLRLL 353 (358)
Q Consensus 316 ~~~h~~~V~~i~~~p~~~~~las--gs~Dg~i~iwDlr~~ 353 (358)
+. |...|++++|+|++ .+|++ |+.||.|+|||+++.
T Consensus 300 ~~-~~~~v~~~~~s~~~-~~l~~~~g~~dg~i~v~~~~~~ 337 (401)
T 4aez_A 300 VD-AGSQVTSLIWSPHS-KEIMSTHGFPDNNLSIWSYSSS 337 (401)
T ss_dssp EE-CSSCEEEEEECSSS-SEEEEEECTTTCEEEEEEEETT
T ss_pred Ee-CCCcEEEEEECCCC-CeEEEEeecCCCcEEEEecCCc
Confidence 64 66789999999999 77777 448999999999874
No 80
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.92 E-value=8.9e-24 Score=195.06 Aligned_cols=165 Identities=14% Similarity=0.213 Sum_probs=138.7
Q ss_pred cCCCceeEEEEcCCCC---cEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCC
Q 018322 163 AHQGCVNRIRAMTQNP---HICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNP 239 (358)
Q Consensus 163 ~H~~~V~~i~~~p~~~---~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~ 239 (358)
.|.+.|++++|+|++. .+|++|+.||.|+|||+.. ...+..+.+|...|.+++|+|
T Consensus 67 ~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~---------------------~~~~~~~~~~~~~i~~~~~~~ 125 (366)
T 3k26_A 67 DADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPIT---------------------MQCIKHYVGHGNAINELKFHP 125 (366)
T ss_dssp CTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTT---------------------CCEEEEEESCCSCEEEEEECS
T ss_pred CCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchh---------------------ceEeeeecCCCCcEEEEEECC
Confidence 3889999999999842 6999999999999999986 567788889999999999999
Q ss_pred -CCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeE----
Q 018322 240 -ITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALT---- 314 (358)
Q Consensus 240 -~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~---- 314 (358)
++. +|++|+.||.|++||++++ ........+.+|...|.+++|+|++. +|++++.||.|++||++++. .+.
T Consensus 126 ~~~~-~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~-~~~~~~~ 201 (366)
T 3k26_A 126 RDPN-LLLSVSKDHALRLWNIQTD-TLVAIFGGVEGHRDEVLSADYDLLGE-KIMSCGMDHSLKLWRINSKR-MMNAIKE 201 (366)
T ss_dssp SCTT-EEEEEETTSCEEEEETTTT-EEEEEECSTTSCSSCEEEEEECTTSS-EEEEEETTSCEEEEESCSHH-HHHHHHH
T ss_pred CCCC-EEEEEeCCCeEEEEEeecC-eEEEEecccccccCceeEEEECCCCC-EEEEecCCCCEEEEECCCCc-cccccce
Confidence 666 9999999999999999874 32211222367999999999999998 99999999999999998742 221
Q ss_pred ------------------------EEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCCC
Q 018322 315 ------------------------SFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKV 355 (358)
Q Consensus 315 ------------------------~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~~ 355 (358)
....|...|++++|+ + .+|++++.||.|++||+++.+.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~-~~l~~~~~d~~i~~wd~~~~~~ 263 (366)
T 3k26_A 202 SYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--G-DLILSKSCENAIVCWKPGKMED 263 (366)
T ss_dssp HHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--T-TEEEEECSSSEEEEEEESSTTC
T ss_pred eEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--C-CEEEEEecCCEEEEEeCCCccc
Confidence 223499999999999 5 7999999999999999988754
No 81
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.92 E-value=8.6e-24 Score=197.54 Aligned_cols=163 Identities=8% Similarity=0.079 Sum_probs=128.6
Q ss_pred CCCceeEEEEcCCCCcE-EEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCC
Q 018322 164 HQGCVNRIRAMTQNPHI-CASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITT 242 (358)
Q Consensus 164 H~~~V~~i~~~p~~~~~-lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~ 242 (358)
+...+.+++|+|++..+ +|+++.|++|+|||+.. ..++..+. |..+|++|+|+|++.
T Consensus 132 ~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~---------------------~~~~~~~~-~~~~V~~v~fspdg~ 189 (365)
T 4h5i_A 132 ADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSD---------------------LTEKFEIE-TRGEVKDLHFSTDGK 189 (365)
T ss_dssp TTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTT---------------------TEEEEEEE-CSSCCCEEEECTTSS
T ss_pred cccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCC---------------------CcEEEEeC-CCCceEEEEEccCCc
Confidence 34558899999999433 34556799999999987 45555554 777899999999998
Q ss_pred CeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCC----cEEEEECCCCCCe---eEE
Q 018322 243 GRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDG----HIAIWDTRVGKSA---LTS 315 (358)
Q Consensus 243 ~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg----~I~iwD~r~~~~~---~~~ 315 (358)
+|++++.+ .+++|+..++.... .....+|...|.+++|+|++. ++++++.|+ .+++|+++..... ...
T Consensus 190 -~l~s~s~~-~~~~~~~~~~~~~~--~~~~~~~~~~v~~v~fspdg~-~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~ 264 (365)
T 4h5i_A 190 -VVAYITGS-SLEVISTVTGSCIA--RKTDFDKNWSLSKINFIADDT-VLIAASLKKGKGIVLTKISIKSGNTSVLRSKQ 264 (365)
T ss_dssp -EEEEECSS-CEEEEETTTCCEEE--EECCCCTTEEEEEEEEEETTE-EEEEEEESSSCCEEEEEEEEETTEEEEEEEEE
T ss_pred -eEEeccce-eEEEEEeccCccee--eeecCCCCCCEEEEEEcCCCC-EEEEEecCCcceeEEeecccccceecceeeee
Confidence 99999854 56667665533322 234567889999999999998 899998887 6889998764322 334
Q ss_pred EecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 316 FKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 316 ~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
+..|...|++++|+|++ .+||+|+.|++|+|||+++++
T Consensus 265 ~~~~~~~V~~~~~Spdg-~~lasgs~D~~V~iwd~~~~~ 302 (365)
T 4h5i_A 265 VTNRFKGITSMDVDMKG-ELAVLASNDNSIALVKLKDLS 302 (365)
T ss_dssp EESSCSCEEEEEECTTS-CEEEEEETTSCEEEEETTTTE
T ss_pred ecCCCCCeEeEEECCCC-CceEEEcCCCEEEEEECCCCc
Confidence 67899999999999999 999999999999999999875
No 82
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.2e-23 Score=218.40 Aligned_cols=203 Identities=11% Similarity=0.067 Sum_probs=162.4
Q ss_pred cCcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018322 66 GWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (358)
Q Consensus 66 ~wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (358)
.-+..++.|-|++ .+|++|+ .++.|+||+..
T Consensus 17 ~~~V~~lafspdg-----------~~lAsgs-----~Dg~I~lw~~~--------------------------------- 47 (902)
T 2oaj_A 17 SSKPIAAAFDFTQ-----------NLLAIAT-----VTGEVHIYGQQ--------------------------------- 47 (902)
T ss_dssp SSCEEEEEEETTT-----------TEEEEEE-----TTSEEEEECST---------------------------------
T ss_pred CCCcEEEEECCCC-----------CEEEEEe-----CCCEEEEEeCC---------------------------------
Confidence 4456788888885 4888888 45689998642
Q ss_pred CccCCCCCCCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEE
Q 018322 146 DDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF 225 (358)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (358)
.... .....|.+.|++++|+| + .+||+++.|++|+|||+.. .+.+..+
T Consensus 48 --------~~~~-~~~~~~~~~V~~l~fsp-g-~~L~S~s~D~~v~lWd~~~---------------------~~~~~~~ 95 (902)
T 2oaj_A 48 --------QVEV-VIKLEDRSAIKEMRFVK-G-IYLVVINAKDTVYVLSLYS---------------------QKVLTTV 95 (902)
T ss_dssp --------TCEE-EEECSSCCCEEEEEEET-T-TEEEEEETTCEEEEEETTT---------------------CSEEEEE
T ss_pred --------CcEE-EEEcCCCCCEEEEEEcC-C-CEEEEEECcCeEEEEECCC---------------------CcEEEEE
Confidence 1111 23356889999999999 6 5999999999999999987 4555566
Q ss_pred cCCCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCC-------CccccCCCcEEEEEECCCCCCEEEEEECC
Q 018322 226 GGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDP-------NPFIGHSASVEDLQWSPTEPDVFASCSVD 298 (358)
Q Consensus 226 ~~h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~-------~~~~~h~~~V~~v~~sp~~~~~las~s~D 298 (358)
. |...|++++|+|++. +|++|+.||.|++||+.+........ ..+.+|.+.|.+|+|+|++...|++|+.|
T Consensus 96 ~-~~~~V~~v~~sp~g~-~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~d 173 (902)
T 2oaj_A 96 F-VPGKITSIDTDASLD-WMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEY 173 (902)
T ss_dssp E-CSSCEEEEECCTTCS-EEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSS
T ss_pred c-CCCCEEEEEECCCCC-EEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCC
Confidence 4 667999999999998 99999999999999997643210000 23467999999999999765589999999
Q ss_pred CcEEEEECCCCCCeeEEEecC------------------CCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 299 GHIAIWDTRVGKSALTSFKAH------------------NADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 299 g~I~iwD~r~~~~~~~~~~~h------------------~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
|.| |||++++ .++..+..| ...|++++|+|++ .+||+|+.||+|+|||+++++
T Consensus 174 g~v-lWd~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg-~~lasgs~Dg~i~lWd~~~g~ 244 (902)
T 2oaj_A 174 VTL-TYSLVEN-EIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNS-LHIITIHEDNSLVFWDANSGH 244 (902)
T ss_dssp CEE-EEETTTT-EEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTS-SEEEEEETTCCEEEEETTTCC
T ss_pred CcE-EEECCCC-ceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCC-CEEEEEECCCeEEEEECCCCc
Confidence 999 9999984 466666554 5779999999999 999999999999999998764
No 83
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.92 E-value=5.3e-23 Score=193.54 Aligned_cols=163 Identities=20% Similarity=0.361 Sum_probs=139.8
Q ss_pred CCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCC
Q 018322 164 HQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTG 243 (358)
Q Consensus 164 H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~ 243 (358)
|.+.|++++|+|++ .+||+++.||.|+|||.. ...+..+.+|...|++++|+|++.
T Consensus 107 ~~~~v~~~~~s~~~-~~l~~~~~dg~i~i~~~~----------------------~~~~~~~~~~~~~v~~~~~~~~~~- 162 (425)
T 1r5m_A 107 TTNQVTCLAWSHDG-NSIVTGVENGELRLWNKT----------------------GALLNVLNFHRAPIVSVKWNKDGT- 162 (425)
T ss_dssp -CBCEEEEEECTTS-SEEEEEETTSCEEEEETT----------------------SCEEEEECCCCSCEEEEEECTTSS-
T ss_pred CCCceEEEEEcCCC-CEEEEEeCCCeEEEEeCC----------------------CCeeeeccCCCccEEEEEECCCCC-
Confidence 68899999999988 799999999999999933 466778889999999999999998
Q ss_pred eEEEEeCCCcEEEEecCCCCCcc----------------------------------------------------cCCCc
Q 018322 244 RLVTGDCNSCIYLWEPASDATWN----------------------------------------------------VDPNP 271 (358)
Q Consensus 244 ~l~sgs~dg~I~lwd~~~~~~~~----------------------------------------------------~~~~~ 271 (358)
+|++++.||.|++||+.++.... .....
T Consensus 163 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~ 242 (425)
T 1r5m_A 163 HIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGK 242 (425)
T ss_dssp EEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEE
T ss_pred EEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeee
Confidence 99999999999999997632100 00123
Q ss_pred cccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCC
Q 018322 272 FIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLR 351 (358)
Q Consensus 272 ~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr 351 (358)
+..|...|.+++|+|++. +|++++.||.|++||++.+ .++..+..|...|.+++|+|++ +|++++.||.|++||++
T Consensus 243 ~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~ 318 (425)
T 1r5m_A 243 LIGHHGPISVLEFNDTNK-LLLSASDDGTLRIWHGGNG-NSQNCFYGHSQSIVSASWVGDD--KVISCSMDGSVRLWSLK 318 (425)
T ss_dssp ECCCSSCEEEEEEETTTT-EEEEEETTSCEEEECSSSB-SCSEEECCCSSCEEEEEEETTT--EEEEEETTSEEEEEETT
T ss_pred eccCCCceEEEEECCCCC-EEEEEcCCCEEEEEECCCC-ccceEecCCCccEEEEEECCCC--EEEEEeCCCcEEEEECC
Confidence 446889999999999998 9999999999999999984 5777888899999999999988 89999999999999998
Q ss_pred CCC
Q 018322 352 LLK 354 (358)
Q Consensus 352 ~~~ 354 (358)
+.+
T Consensus 319 ~~~ 321 (425)
T 1r5m_A 319 QNT 321 (425)
T ss_dssp TTE
T ss_pred CCc
Confidence 764
No 84
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.3e-23 Score=197.63 Aligned_cols=162 Identities=15% Similarity=0.253 Sum_probs=143.0
Q ss_pred EEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCC
Q 018322 160 RKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNP 239 (358)
Q Consensus 160 ~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~ 239 (358)
....|.+.|+++.|+|++ .+|++++.||.|++||+.. ..++..+.+|...+.+++|+|
T Consensus 242 ~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~---------------------~~~~~~~~~~~~~i~~~~~~~ 299 (425)
T 1r5m_A 242 KLIGHHGPISVLEFNDTN-KLLLSASDDGTLRIWHGGN---------------------GNSQNCFYGHSQSIVSASWVG 299 (425)
T ss_dssp EECCCSSCEEEEEEETTT-TEEEEEETTSCEEEECSSS---------------------BSCSEEECCCSSCEEEEEEET
T ss_pred eeccCCCceEEEEECCCC-CEEEEEcCCCEEEEEECCC---------------------CccceEecCCCccEEEEEECC
Confidence 445899999999999998 6999999999999999987 466778889999999999999
Q ss_pred CCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCC---------
Q 018322 240 ITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGK--------- 310 (358)
Q Consensus 240 ~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~--------- 310 (358)
++ +|++++.||.|++||+++.. . ...+..|...|.+++|+|++. +|++++.||.|++||++...
T Consensus 300 ~~--~l~~~~~d~~i~i~d~~~~~-~---~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~i~~~~~~~~~~~~~~~~ 372 (425)
T 1r5m_A 300 DD--KVISCSMDGSVRLWSLKQNT-L---LALSIVDGVPIFAGRISQDGQ-KYAVAFMDGQVNVYDLKKLNSKSRSLYGN 372 (425)
T ss_dssp TT--EEEEEETTSEEEEEETTTTE-E---EEEEECTTCCEEEEEECTTSS-EEEEEETTSCEEEEECHHHHC--------
T ss_pred CC--EEEEEeCCCcEEEEECCCCc-E---eEecccCCccEEEEEEcCCCC-EEEEEECCCeEEEEECCCCccceeeeecc
Confidence 87 89999999999999997733 2 245677899999999999998 99999999999999998742
Q ss_pred ----------CeeEEEecCCC--CeEEEEEeCCCCcEEEEEeCCCCEEEEeCC
Q 018322 311 ----------SALTSFKAHNA--DVNVISWNRLASCLLASGSDDGTFSIHDLR 351 (358)
Q Consensus 311 ----------~~~~~~~~h~~--~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr 351 (358)
.++..+..|.. .|++++|+|++ .+|++|+.||.|+|||++
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 373 RDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAG-NKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp ------CEECCEEEEECCTTCCCCEEEEEECTTS-SEEEEEESSSCCEEEECC
T ss_pred cccccCcccchhhhhhcCcccCCceEEEEccCCC-ceEEEEecCceEEEEeec
Confidence 15677788866 99999999999 899999999999999986
No 85
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.92 E-value=1.6e-23 Score=214.28 Aligned_cols=201 Identities=16% Similarity=0.241 Sum_probs=169.2
Q ss_pred cceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 018322 68 PCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDDD 147 (358)
Q Consensus 68 P~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (358)
+..++.|-|++ .+|++|+ .++.|.||++.
T Consensus 15 ~v~~i~~sp~~-----------~~la~~~-----~~g~v~iwd~~----------------------------------- 43 (814)
T 3mkq_A 15 RVKGIDFHPTE-----------PWVLTTL-----YSGRVEIWNYE----------------------------------- 43 (814)
T ss_dssp CEEEEEECSSS-----------SEEEEEE-----TTSEEEEEETT-----------------------------------
T ss_pred ceEEEEECCCC-----------CEEEEEe-----CCCEEEEEECC-----------------------------------
Confidence 46688888875 4788887 45689999872
Q ss_pred cCCCCCCCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcC
Q 018322 148 EEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGG 227 (358)
Q Consensus 148 ~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (358)
.......+..|.+.|+++.|+|++ .+||+++.||.|+|||+.. ...+..+.+
T Consensus 44 ------~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vw~~~~---------------------~~~~~~~~~ 95 (814)
T 3mkq_A 44 ------TQVEVRSIQVTETPVRAGKFIARK-NWIIVGSDDFRIRVFNYNT---------------------GEKVVDFEA 95 (814)
T ss_dssp ------TTEEEEEEECCSSCEEEEEEEGGG-TEEEEEETTSEEEEEETTT---------------------CCEEEEEEC
T ss_pred ------CCceEEEEecCCCcEEEEEEeCCC-CEEEEEeCCCeEEEEECCC---------------------CcEEEEEec
Confidence 333445666899999999999999 7999999999999999987 567788899
Q ss_pred CCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECC-CCCCEEEEEECCCcEEEEEC
Q 018322 228 HKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSP-TEPDVFASCSVDGHIAIWDT 306 (358)
Q Consensus 228 h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp-~~~~~las~s~Dg~I~iwD~ 306 (358)
|...|++++|+|++. +|++|+.||.|++|++.+..... ..+.+|...|.+++|+| ++. .|++++.||.|++||+
T Consensus 96 ~~~~v~~~~~s~~~~-~l~~~~~dg~i~vw~~~~~~~~~---~~~~~~~~~v~~~~~~p~~~~-~l~~~~~dg~v~vwd~ 170 (814)
T 3mkq_A 96 HPDYIRSIAVHPTKP-YVLSGSDDLTVKLWNWENNWALE---QTFEGHEHFVMCVAFNPKDPS-TFASGCLDRTVKVWSL 170 (814)
T ss_dssp CSSCEEEEEECSSSS-EEEEEETTSEEEEEEGGGTSEEE---EEEECCSSCEEEEEEETTEEE-EEEEEETTSEEEEEET
T ss_pred CCCCEEEEEEeCCCC-EEEEEcCCCEEEEEECCCCceEE---EEEcCCCCcEEEEEEEcCCCC-EEEEEeCCCeEEEEEC
Confidence 999999999999998 99999999999999997643322 56778999999999999 555 9999999999999999
Q ss_pred CCCCCeeEEEec-CCCCeEEEEEeC--CCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 307 RVGKSALTSFKA-HNADVNVISWNR--LASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 307 r~~~~~~~~~~~-h~~~V~~i~~~p--~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
+.+. +...+.. |...|++++|+| ++ .+|++|+.||.|++||+++.+
T Consensus 171 ~~~~-~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~dg~i~~~d~~~~~ 219 (814)
T 3mkq_A 171 GQST-PNFTLTTGQERGVNYVDYYPLPDK-PYMITASDDLTIKIWDYQTKS 219 (814)
T ss_dssp TCSS-CSEEEECCCTTCCCEEEECCSTTC-CEEEEECTTSEEEEEETTTTE
T ss_pred CCCc-ceeEEecCCCCCEEEEEEEECCCC-CEEEEEeCCCEEEEEECCCCc
Confidence 8854 4455544 448899999999 78 899999999999999998754
No 86
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.7e-23 Score=193.32 Aligned_cols=167 Identities=12% Similarity=0.041 Sum_probs=131.8
Q ss_pred CCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEE-cCCCCCeEEEEeCC--CC
Q 018322 165 QGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF-GGHKDEGYAIDWNP--IT 241 (358)
Q Consensus 165 ~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~s~--~~ 241 (358)
.+.|+++.++|. +++++.|++|++|+........... ....+..+ .+|...|.+++|+| ++
T Consensus 76 ~~~v~~~~~~~~----~~s~s~D~~i~~w~~~~~~~~~~~~------------~~~~~~~~~~~~~~~v~~~~~~~~~~~ 139 (343)
T 3lrv_A 76 TPNPRTGGEHPA----IISRGPCNRLLLLYPGNQITILDSK------------TNKVLREIEVDSANEIIYMYGHNEVNT 139 (343)
T ss_dssp EECCCTTCCCCS----EEEECSTTEEEEEETTTEEEEEETT------------TCCEEEEEECCCSSCEEEEECCC---C
T ss_pred cCCceeeeeCCc----eEEecCCCeEEEEEccCceEEeecC------------CcceeEEeecCCCCCEEEEEcCCCCCC
Confidence 467888888886 8999999999999987632211110 12323333 36778999999999 88
Q ss_pred CCeEEEEeCCCcEEEEecCCCCCcccCCCcc-ccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEec-C
Q 018322 242 TGRLVTGDCNSCIYLWEPASDATWNVDPNPF-IGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKA-H 319 (358)
Q Consensus 242 ~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~-~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~-h 319 (358)
. +|++|+.||+|++||++++.. . ..+ ..|...|.+++|+|++. +|++|+.||.|+|||++++......+.. |
T Consensus 140 ~-~l~s~s~dg~i~~wd~~~~~~-~---~~~~~~~~~~i~~~~~~pdg~-~lasg~~dg~i~iwd~~~~~~~~~~~~~~h 213 (343)
T 3lrv_A 140 E-YFIWADNRGTIGFQSYEDDSQ-Y---IVHSAKSDVEYSSGVLHKDSL-LLALYSPDGILDVYNLSSPDQASSRFPVDE 213 (343)
T ss_dssp C-EEEEEETTCCEEEEESSSSCE-E---EEECCCSSCCCCEEEECTTSC-EEEEECTTSCEEEEESSCTTSCCEECCCCT
T ss_pred C-EEEEEeCCCcEEEEECCCCcE-E---EEEecCCCCceEEEEECCCCC-EEEEEcCCCEEEEEECCCCCCCccEEeccC
Confidence 7 999999999999999987433 2 222 23566899999999998 9999999999999999996533367777 9
Q ss_pred CCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCCC
Q 018322 320 NADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKV 355 (358)
Q Consensus 320 ~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~~ 355 (358)
...|++++|+|++ .+|++|++ +.|+|||+++.+.
T Consensus 214 ~~~v~~l~fs~~g-~~l~s~~~-~~v~iwd~~~~~~ 247 (343)
T 3lrv_A 214 EAKIKEVKFADNG-YWMVVECD-QTVVCFDLRKDVG 247 (343)
T ss_dssp TSCEEEEEECTTS-SEEEEEES-SBEEEEETTSSTT
T ss_pred CCCEEEEEEeCCC-CEEEEEeC-CeEEEEEcCCCCc
Confidence 9999999999999 89999994 5999999998764
No 87
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.92 E-value=3e-23 Score=191.50 Aligned_cols=208 Identities=17% Similarity=0.295 Sum_probs=162.1
Q ss_pred cCcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018322 66 GWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (358)
Q Consensus 66 ~wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (358)
.-+..++.|.|+... ..+|++|+ .++.|.||++..
T Consensus 39 ~~~v~~~~~~~~~~~--------g~~l~~~~-----~dg~i~iw~~~~-------------------------------- 73 (368)
T 3mmy_A 39 DDSIGCLSFSPPTLP--------GNFLIAGS-----WANDVRCWEVQD-------------------------------- 73 (368)
T ss_dssp SSCEEEEEECCTTSS--------SEEEEEEE-----TTSEEEEEEECT--------------------------------
T ss_pred CCceEEEEEcCCCCC--------ceEEEEEC-----CCCcEEEEEcCC--------------------------------
Confidence 456778889887310 15788887 456899999831
Q ss_pred CccCCCCCCCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEE
Q 018322 146 DDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF 225 (358)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (358)
....+.....+|.+.|++++|+|++ .+|++++.||.|++||+.. .. ...+
T Consensus 74 -------~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~v~iwd~~~---------------------~~-~~~~ 123 (368)
T 3mmy_A 74 -------SGQTIPKAQQMHTGPVLDVCWSDDG-SKVFTASCDKTAKMWDLSS---------------------NQ-AIQI 123 (368)
T ss_dssp -------TSCEEEEEEEECSSCEEEEEECTTS-SEEEEEETTSEEEEEETTT---------------------TE-EEEE
T ss_pred -------CCceeEEEeccccCCEEEEEECcCC-CEEEEEcCCCcEEEEEcCC---------------------CC-ceee
Confidence 0223435677899999999999988 7999999999999999987 23 2346
Q ss_pred cCCCCCeEEEEe--CCCCCCeEEEEeCCCcEEEEecCCCCCcc-------------------------------------
Q 018322 226 GGHKDEGYAIDW--NPITTGRLVTGDCNSCIYLWEPASDATWN------------------------------------- 266 (358)
Q Consensus 226 ~~h~~~v~~l~~--s~~~~~~l~sgs~dg~I~lwd~~~~~~~~------------------------------------- 266 (358)
.+|...|++++| ++++. +|++|+.||.|++||+++.....
T Consensus 124 ~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 202 (368)
T 3mmy_A 124 AQHDAPVKTIHWIKAPNYS-CVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPS 202 (368)
T ss_dssp EECSSCEEEEEEEECSSCE-EEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCE
T ss_pred ccccCceEEEEEEeCCCCC-EEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccc
Confidence 679999999999 88887 89999999999999987642100
Q ss_pred -------------------------------------------------cCCCccccCCC------------cEEEEEEC
Q 018322 267 -------------------------------------------------VDPNPFIGHSA------------SVEDLQWS 285 (358)
Q Consensus 267 -------------------------------------------------~~~~~~~~h~~------------~V~~v~~s 285 (358)
.....+.+|.. .|.+++|+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 282 (368)
T 3mmy_A 203 EFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFH 282 (368)
T ss_dssp EEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEEC
T ss_pred hhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEe
Confidence 00011223443 69999999
Q ss_pred CCCCCEEEEEECCCcEEEEECCCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCC
Q 018322 286 PTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRL 352 (358)
Q Consensus 286 p~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~ 352 (358)
|++. +|++|+.||.|++||++++ .++..+..|...|++++|+|++ .+|++|+.|+..+.|++..
T Consensus 283 p~~~-~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~~~~s~~g-~~l~~~s~d~~~~~~~~~~ 346 (368)
T 3mmy_A 283 PVHG-TLATVGSDGRFSFWDKDAR-TKLKTSEQLDQPISACCFNHNG-NIFAYASSYDWSKGHEFYN 346 (368)
T ss_dssp TTTC-CEEEEETTSCEEEEETTTT-EEEEECCCCSSCEEEEEECTTS-SCEEEEECCCSTTCGGGCC
T ss_pred cCCC-EEEEEccCCeEEEEECCCC-cEEEEecCCCCCceEEEECCCC-CeEEEEecccccccccccC
Confidence 9998 8999999999999999984 5778888999999999999999 8999999888666655543
No 88
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.92 E-value=6.7e-23 Score=187.94 Aligned_cols=207 Identities=16% Similarity=0.138 Sum_probs=158.5
Q ss_pred CcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018322 67 WPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDD 146 (358)
Q Consensus 67 wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (358)
=+..++.|.|++ .+|++|+ .++.|.||++..-
T Consensus 12 ~~v~~~~~s~~~-----------~~l~~~~-----~d~~v~iw~~~~~-------------------------------- 43 (342)
T 1yfq_A 12 DYISDIKIIPSK-----------SLLLITS-----WDGSLTVYKFDIQ-------------------------------- 43 (342)
T ss_dssp SCEEEEEEEGGG-----------TEEEEEE-----TTSEEEEEEEETT--------------------------------
T ss_pred CcEEEEEEcCCC-----------CEEEEEc-----CCCeEEEEEeCCC--------------------------------
Confidence 356688898874 3777776 4569999998410
Q ss_pred ccCCCCCCCeEEEEEecCCCceeEEEEcCCCCc-EEEEEeCCCcEEEEeC-CCCccccccccccccCCCCCCCCCCCcEE
Q 018322 147 DEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPH-ICASWADTGHVQVWDL-RSHLNALAESETIVGQGAPQVSNQSPLVK 224 (358)
Q Consensus 147 ~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~-~lat~s~dg~V~iwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (358)
...........|.+.|++++|+|++ . +|++|+.||.|++||+ .. .....
T Consensus 44 ------~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~dg~i~~wd~~~~----------------------~~~~~ 94 (342)
T 1yfq_A 44 ------AKNVDLLQSLRYKHPLLCCNFIDNT-DLQIYVGTVQGEILKVDLIGS----------------------PSFQA 94 (342)
T ss_dssp ------TTEEEEEEEEECSSCEEEEEEEESS-SEEEEEEETTSCEEEECSSSS----------------------SSEEE
T ss_pred ------CccccceeeeecCCceEEEEECCCC-CcEEEEEcCCCeEEEEEeccC----------------------CceEe
Confidence 0112224456899999999999998 7 8999999999999999 65 22355
Q ss_pred EcC--CCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCC---------CCCccc--------------------------
Q 018322 225 FGG--HKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPAS---------DATWNV-------------------------- 267 (358)
Q Consensus 225 ~~~--h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~---------~~~~~~-------------------------- 267 (358)
+.+ |...|.+++|+| +. +|++|+.|+.|++||+++ ......
T Consensus 95 ~~~~~~~~~v~~l~~~~-~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i 172 (342)
T 1yfq_A 95 LTNNEANLGICRICKYG-DD-KLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQV 172 (342)
T ss_dssp CBSCCCCSCEEEEEEET-TT-EEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEEEESTTEE
T ss_pred ccccCCCCceEEEEeCC-CC-EEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCcEEEEeCCCeE
Confidence 666 888888888888 55 888888888888888754 210000
Q ss_pred ------------CCCccccCCCcEEEEEECC-CCCCEEEEEECCCcEEEEECCCC-----CCeeEEEecCCC--------
Q 018322 268 ------------DPNPFIGHSASVEDLQWSP-TEPDVFASCSVDGHIAIWDTRVG-----KSALTSFKAHNA-------- 321 (358)
Q Consensus 268 ------------~~~~~~~h~~~V~~v~~sp-~~~~~las~s~Dg~I~iwD~r~~-----~~~~~~~~~h~~-------- 321 (358)
.......|...|.+++|+| ++. +|++++.||.|++|+++.. ......+..|..
T Consensus 173 ~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~-~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (342)
T 1yfq_A 173 QWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQE-GYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLA 251 (342)
T ss_dssp EEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGC-EEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSC
T ss_pred EEEECCccccccceeeecCCCCceeEEEECCCCCC-EEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccc
Confidence 0011234677899999999 888 9999999999999999885 356777877765
Q ss_pred -CeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 322 -DVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 322 -~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
.|++++|+|++ .+|++|+.||.|++||+++++
T Consensus 252 ~~i~~~~~s~~~-~~l~~~~~dg~i~vwd~~~~~ 284 (342)
T 1yfq_A 252 YPVNSIEFSPRH-KFLYTAGSDGIISCWNLQTRK 284 (342)
T ss_dssp CCEEEEEECTTT-CCEEEEETTSCEEEEETTTTE
T ss_pred eeEEEEEEcCCC-CEEEEecCCceEEEEcCccHh
Confidence 99999999999 899999999999999998764
No 89
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.91 E-value=9.1e-23 Score=188.27 Aligned_cols=225 Identities=13% Similarity=0.190 Sum_probs=173.9
Q ss_pred HhhhcccccCcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCC
Q 018322 58 NSLHAFHIGWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSES 137 (358)
Q Consensus 58 ~~~~~~~~~wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 137 (358)
..+..+...-+..++.|.|++ .+|++|+.......+.|.+|++..........
T Consensus 107 ~~~~~~~~~~~v~~~~~~~~~-----------~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~---------------- 159 (369)
T 3zwl_B 107 QCVATWKSPVPVKRVEFSPCG-----------NYFLAILDNVMKNPGSINIYEIERDSATHELT---------------- 159 (369)
T ss_dssp CEEEEEECSSCEEEEEECTTS-----------SEEEEEECCBTTBCCEEEEEEEEECTTTCCEE----------------
T ss_pred cEEEEeecCCCeEEEEEccCC-----------CEEEEecCCccCCCCEEEEEEecCCccceeec----------------
Confidence 334444556677778887764 46777775433345799999985321111000
Q ss_pred CCCCCCCCCccCCCCCCCeEEEEEecCCC--ceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCC
Q 018322 138 SDSDEDSDDDEEGGSGTPILQLRKVAHQG--CVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQ 215 (358)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~H~~--~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~ 215 (358)
... ..+. .....|.+ .|.+++|+|++ .+|++++.+|.|++||+..
T Consensus 160 ---------~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~dg~i~i~d~~~------------------ 206 (369)
T 3zwl_B 160 ---------KVS---EEPI--HKIITHEGLDAATVAGWSTKG-KYIIAGHKDGKISKYDVSN------------------ 206 (369)
T ss_dssp ---------EEC---SSCS--EEEECCTTCCCEEEEEECGGG-CEEEEEETTSEEEEEETTT------------------
T ss_pred ---------ccc---ccee--eeccCCcCccceeEEEEcCCC-CEEEEEcCCCEEEEEECCC------------------
Confidence 000 0122 33446666 99999999998 7899999999999999986
Q ss_pred CCCCCCcEEEcCCCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEE
Q 018322 216 VSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASC 295 (358)
Q Consensus 216 ~~~~~~~~~~~~h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~ 295 (358)
...++..+..|...|.+++|+|++. +|++++.||.|++||+++... . ..+. +...+.+++|+|++. +++++
T Consensus 207 --~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~-~---~~~~-~~~~~~~~~~~~~~~-~l~~~ 277 (369)
T 3zwl_B 207 --NYEYVDSIDLHEKSISDMQFSPDLT-YFITSSRDTNSFLVDVSTLQV-L---KKYE-TDCPLNTAVITPLKE-FIILG 277 (369)
T ss_dssp --TTEEEEEEECCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCCE-E---EEEE-CSSCEEEEEECSSSS-EEEEE
T ss_pred --CcEeEEEEecCCCceeEEEECCCCC-EEEEecCCceEEEEECCCCce-e---eeec-CCCCceeEEecCCCc-eEEEe
Confidence 2456778889999999999999998 999999999999999987432 2 2233 778899999999999 88888
Q ss_pred ECCC--------------cEEEEECCCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCC
Q 018322 296 SVDG--------------HIAIWDTRVGKSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLL 353 (358)
Q Consensus 296 s~Dg--------------~I~iwD~r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~ 353 (358)
+.++ .|++||++++ .++..+.+|...|++++|+|++ .+|++|+.||.|+||++++.
T Consensus 278 ~~~~~~~~~~~~~~~~~~~i~~~d~~~~-~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~dg~v~iw~~~~~ 347 (369)
T 3zwl_B 278 GGQEAKDVTTTSANEGKFEARFYHKIFE-EEIGRVQGHFGPLNTVAISPQG-TSYASGGEDGFIRLHHFEKS 347 (369)
T ss_dssp ECCC-------------CEEEEEETTTC-CEEEEEECCSSCEEEEEECTTS-SEEEEEETTSEEEEEEECHH
T ss_pred ecCCCceEEEEecCCCcceeEEEecCCC-cchhheecccCcEEEEEECCCC-CEEEEEcCCCeEEEEECccc
Confidence 8888 8999999985 5778889999999999999999 89999999999999999753
No 90
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.91 E-value=6.1e-23 Score=189.64 Aligned_cols=168 Identities=8% Similarity=0.035 Sum_probs=131.7
Q ss_pred EEEEEecCCCceeEEEEcC--CCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEc-CCCCCeE
Q 018322 157 LQLRKVAHQGCVNRIRAMT--QNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG-GHKDEGY 233 (358)
Q Consensus 157 ~~~~~~~H~~~V~~i~~~p--~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~ 233 (358)
+.....+|.+.|+++.|+| ++ .++++++.||+|++||+.. ......+. .|...+.
T Consensus 117 ~~~~~~~~~~~v~~~~~~~~~~~-~~l~s~s~dg~i~~wd~~~---------------------~~~~~~~~~~~~~~i~ 174 (343)
T 3lrv_A 117 LREIEVDSANEIIYMYGHNEVNT-EYFIWADNRGTIGFQSYED---------------------DSQYIVHSAKSDVEYS 174 (343)
T ss_dssp EEEEECCCSSCEEEEECCC---C-CEEEEEETTCCEEEEESSS---------------------SCEEEEECCCSSCCCC
T ss_pred eEEeecCCCCCEEEEEcCCCCCC-CEEEEEeCCCcEEEEECCC---------------------CcEEEEEecCCCCceE
Confidence 4445557889999999999 88 7999999999999999987 34444443 3455899
Q ss_pred EEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCcccc-CCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCe
Q 018322 234 AIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIG-HSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSA 312 (358)
Q Consensus 234 ~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~-h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~ 312 (358)
+++|+|++. +|++|+.||.|++||++++... ...+.+ |...|.+++|+|++. +|++++ ++.|++||++... +
T Consensus 175 ~~~~~pdg~-~lasg~~dg~i~iwd~~~~~~~---~~~~~~~h~~~v~~l~fs~~g~-~l~s~~-~~~v~iwd~~~~~-~ 247 (343)
T 3lrv_A 175 SGVLHKDSL-LLALYSPDGILDVYNLSSPDQA---SSRFPVDEEAKIKEVKFADNGY-WMVVEC-DQTVVCFDLRKDV-G 247 (343)
T ss_dssp EEEECTTSC-EEEEECTTSCEEEEESSCTTSC---CEECCCCTTSCEEEEEECTTSS-EEEEEE-SSBEEEEETTSST-T
T ss_pred EEEECCCCC-EEEEEcCCCEEEEEECCCCCCC---ccEEeccCCCCEEEEEEeCCCC-EEEEEe-CCeEEEEEcCCCC-c
Confidence 999999998 9999999999999999885432 134566 999999999999998 899999 5599999999854 3
Q ss_pred eEEEe---cCCCCeE--EEEEeCCCCcEEEEEeC-CCCEEEEeCCCCC
Q 018322 313 LTSFK---AHNADVN--VISWNRLASCLLASGSD-DGTFSIHDLRLLK 354 (358)
Q Consensus 313 ~~~~~---~h~~~V~--~i~~~p~~~~~lasgs~-Dg~i~iwDlr~~~ 354 (358)
+..+. .|...+. +++|+|++ .+|++|+. |+.|+||++.+..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~g-~~l~~~s~~d~~i~v~~~~~~~ 294 (343)
T 3lrv_A 248 TLAYPTYTIPEFKTGTVTYDIDDSG-KNMIAYSNESNSLTIYKFDKKT 294 (343)
T ss_dssp CBSSCCCBC-----CCEEEEECTTS-SEEEEEETTTTEEEEEEECTTT
T ss_pred ceeecccccccccccceEEEECCCC-CEEEEecCCCCcEEEEEEcccc
Confidence 33322 2444444 69999999 89999888 9999999986554
No 91
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.91 E-value=6.5e-23 Score=196.66 Aligned_cols=170 Identities=22% Similarity=0.274 Sum_probs=143.9
Q ss_pred eEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEE
Q 018322 156 ILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAI 235 (358)
Q Consensus 156 ~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 235 (358)
.....+.+|.+.|+++.|+|++ ++++|+.||+|++||+.. ...+..+.+|...|.++
T Consensus 153 ~~~~~~~~h~~~V~~l~~~~~~--~l~s~s~dg~i~vwd~~~---------------------~~~~~~~~~h~~~v~~l 209 (464)
T 3v7d_B 153 KFLLQLSGHDGGVWALKYAHGG--ILVSGSTDRTVRVWDIKK---------------------GCCTHVFEGHNSTVRCL 209 (464)
T ss_dssp EEEEEECCCSSCEEEEEECSTT--EEEEEETTSCEEEEETTT---------------------TEEEEEECCCSSCEEEE
T ss_pred cEEEEEeCCCcCEEEEEEcCCC--EEEEEeCCCCEEEEECCC---------------------CcEEEEECCCCCccEEE
Confidence 4445667899999999999977 899999999999999987 46677889999999999
Q ss_pred EeCC--CCCCeEEEEeCCCcEEEEecCCCCCccc-------------------CCCccccCCCcEEEEEECCCCCCEEEE
Q 018322 236 DWNP--ITTGRLVTGDCNSCIYLWEPASDATWNV-------------------DPNPFIGHSASVEDLQWSPTEPDVFAS 294 (358)
Q Consensus 236 ~~s~--~~~~~l~sgs~dg~I~lwd~~~~~~~~~-------------------~~~~~~~h~~~V~~v~~sp~~~~~las 294 (358)
+|++ ++. +|++|+.||.|++||+++...... ....+.+|...|.++. +++. ++++
T Consensus 210 ~~~~~~~~~-~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~-~l~~ 285 (464)
T 3v7d_B 210 DIVEYKNIK-YIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVS--GHGN-IVVS 285 (464)
T ss_dssp EEEESSSCE-EEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEE--EETT-EEEE
T ss_pred EEecCCCCC-EEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEc--CCCC-EEEE
Confidence 9995 455 899999999999999987432110 0124567888888874 5566 9999
Q ss_pred EECCCcEEEEECCCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 295 CSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 295 ~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
|+.||.|++||++++ .++..+.+|...|.+++|+|++ .+|++|+.||.|++||+++++
T Consensus 286 ~~~d~~i~vwd~~~~-~~~~~~~~~~~~v~~~~~~~~~-~~l~sg~~dg~i~vwd~~~~~ 343 (464)
T 3v7d_B 286 GSYDNTLIVWDVAQM-KCLYILSGHTDRIYSTIYDHER-KRCISASMDTTIRIWDLENGE 343 (464)
T ss_dssp EETTSCEEEEETTTT-EEEEEECCCSSCEEEEEEETTT-TEEEEEETTSCEEEEETTTTE
T ss_pred EeCCCeEEEEECCCC-cEEEEecCCCCCEEEEEEcCCC-CEEEEEeCCCcEEEEECCCCc
Confidence 999999999999984 5778889999999999999999 899999999999999998764
No 92
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.91 E-value=5.2e-23 Score=192.74 Aligned_cols=220 Identities=14% Similarity=0.159 Sum_probs=164.7
Q ss_pred cCcceeEEEEec----cCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCC
Q 018322 66 GWPCLSFDIVRD----TLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSD 141 (358)
Q Consensus 66 ~wP~ls~~~~~d----~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (358)
.-+..++.|.|+ +.. ..+|++|+ .++.|.||++.....
T Consensus 62 ~~~v~~~~~~~~~~~~g~~--------~~~l~s~~-----~dg~i~iw~~~~~~~------------------------- 103 (397)
T 1sq9_A 62 KSGLHHVDVLQAIERDAFE--------LCLVATTS-----FSGDLLFYRITREDE------------------------- 103 (397)
T ss_dssp TTCEEEEEEEEEEETTTEE--------EEEEEEEE-----TTSCEEEEEEEECTT-------------------------
T ss_pred CCcEEEEEEecccccCCcc--------ccEEEEEc-----CCCCEEEEEccCCcc-------------------------
Confidence 446778888887 200 13677776 456899999852100
Q ss_pred CCCCCccCCCCCCCeEEEEEecC-----CCceeEEEEc----CCCCcE-EEEEeCCCcEEEEeCCCCccccccccccccC
Q 018322 142 EDSDDDEEGGSGTPILQLRKVAH-----QGCVNRIRAM----TQNPHI-CASWADTGHVQVWDLRSHLNALAESETIVGQ 211 (358)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~H-----~~~V~~i~~~----p~~~~~-lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~ 211 (358)
........+..| .+.|+++.|+ |++ .+ |++++.||.|++||+..........
T Consensus 104 -----------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~------ 165 (397)
T 1sq9_A 104 -----------TKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLL-SHRLVATDVKGTTYIWKFHPFADESNSL------ 165 (397)
T ss_dssp -----------TCCEEEEEECCSCTTGGGSCEEEEEEECCC-----CEEEEEEETTSCEEEEEEESSSSHHHHT------
T ss_pred -----------cccccceeecccccccCCCcEEEEEEeeccCCCC-ceEEEEEeCCCcEEEEeCCccccccccc------
Confidence 022334566678 5999999999 888 57 9999999999999997611000000
Q ss_pred CCCCCCCCCCcEEE-------cCCCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCcccc---C---CCc
Q 018322 212 GAPQVSNQSPLVKF-------GGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIG---H---SAS 278 (358)
Q Consensus 212 ~~~~~~~~~~~~~~-------~~h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~---h---~~~ 278 (358)
.....+...+ ..|...+++++|+|++ +|++|+.||.|++||+++. ... ..+.. | ...
T Consensus 166 ----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~~-~~~---~~~~~~~~h~~~~~~ 235 (397)
T 1sq9_A 166 ----TLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELSTL-RPL---YNFESQHSMINNSNS 235 (397)
T ss_dssp ----TTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTTT-EEE---EEEECCC---CCCCC
T ss_pred ----eeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCCC-cee---EEEeccccccccCCc
Confidence 0011222245 4588899999999988 9999999999999999873 322 45666 8 999
Q ss_pred EEEEEECCCCCCEEEEEECC---CcEEEEECCCCCCeeEEEec-------------CCCCeEEEEEeCCCCcEEEEEeCC
Q 018322 279 VEDLQWSPTEPDVFASCSVD---GHIAIWDTRVGKSALTSFKA-------------HNADVNVISWNRLASCLLASGSDD 342 (358)
Q Consensus 279 V~~v~~sp~~~~~las~s~D---g~I~iwD~r~~~~~~~~~~~-------------h~~~V~~i~~~p~~~~~lasgs~D 342 (358)
|.+++|+|++. +|++++.| |.|++||++++ .++..+.. |...|++++|+|++ .+|++|+.|
T Consensus 236 i~~i~~~~~~~-~l~~~~~d~~~g~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d 312 (397)
T 1sq9_A 236 IRSVKFSPQGS-LLAIAHDSNSFGCITLYETEFG-ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSG-ETLCSAGWD 312 (397)
T ss_dssp EEEEEECSSTT-EEEEEEEETTEEEEEEEETTTC-CEEEEECBC--------CCBSBSSCEEEEEECSSS-SEEEEEETT
T ss_pred cceEEECCCCC-EEEEEecCCCCceEEEEECCCC-cccceeccCcccccccccccccCCcEEEEEECCCC-CEEEEEeCC
Confidence 99999999988 99999999 99999999985 57777877 99999999999999 899999999
Q ss_pred CCEEEEeCCCCC
Q 018322 343 GTFSIHDLRLLK 354 (358)
Q Consensus 343 g~i~iwDlr~~~ 354 (358)
|.|+|||+++.+
T Consensus 313 g~i~iwd~~~~~ 324 (397)
T 1sq9_A 313 GKLRFWDVKTKE 324 (397)
T ss_dssp SEEEEEETTTTE
T ss_pred CeEEEEEcCCCc
Confidence 999999998764
No 93
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.91 E-value=2.8e-23 Score=211.89 Aligned_cols=212 Identities=21% Similarity=0.301 Sum_probs=170.4
Q ss_pred cCcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018322 66 GWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (358)
Q Consensus 66 ~wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (358)
.-|..++.|.|+.. ..+|++|+ .++.|.||++..
T Consensus 53 ~~~V~~l~~s~~~~---------~~~l~s~s-----~Dg~I~vwd~~~-------------------------------- 86 (753)
T 3jro_A 53 EGPVWRVDWAHPKF---------GTILASCS-----YDGKVLIWKEEN-------------------------------- 86 (753)
T ss_dssp SSCEEEEEECCTTS---------CSEEEEEE-----TTSCEEEEEEET--------------------------------
T ss_pred cCceEEEEecCCCC---------CCEEEEEe-----CCCeEEEEECCC--------------------------------
Confidence 45777888887631 14788887 467899999841
Q ss_pred CccCCCCCCCeEEEEEecCCCceeEEEEcCC--CCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcE
Q 018322 146 DDEEGGSGTPILQLRKVAHQGCVNRIRAMTQ--NPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLV 223 (358)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~--~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (358)
..........+|.+.|+++.|+|+ + .++++|+.||.|++||+... ......
T Consensus 87 -------~~~~~~~~~~~h~~~V~~v~~sp~~~~-~~l~sgs~dg~I~vwdl~~~-------------------~~~~~~ 139 (753)
T 3jro_A 87 -------GRWSQIAVHAVHSASVNSVQWAPHEYG-PLLLVASSDGKVSVVEFKEN-------------------GTTSPI 139 (753)
T ss_dssp -------TEEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTSEEEEEECCSS-------------------SCCCCE
T ss_pred -------CcccccccccCCCCCeEEEEECCCCCC-CEEEEEeCCCcEEEEEeecC-------------------CCccee
Confidence 122344566789999999999998 6 79999999999999999872 124455
Q ss_pred EEcCCCCCeEEEEeCCC-------------CCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCC---
Q 018322 224 KFGGHKDEGYAIDWNPI-------------TTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPT--- 287 (358)
Q Consensus 224 ~~~~h~~~v~~l~~s~~-------------~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~--- 287 (358)
.+.+|...|.+++|+|. +. +|++|+.||.|++||++...........+.+|...|.+++|+|+
T Consensus 140 ~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~-~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~ 218 (753)
T 3jro_A 140 IIDAHAIGVNSASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLL 218 (753)
T ss_dssp EEECCSSCEEEEEECCCC---------CGGGC-CEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSS
T ss_pred EeecCCCceEEEEecCcccccccccccCCCCC-EEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCC
Confidence 67899999999999994 65 99999999999999998754322223567789999999999999
Q ss_pred CCCEEEEEECCCcEEEEECCCCCC----eeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCC
Q 018322 288 EPDVFASCSVDGHIAIWDTRVGKS----ALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLL 353 (358)
Q Consensus 288 ~~~~las~s~Dg~I~iwD~r~~~~----~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~ 353 (358)
+. +|++|+.||.|++||++.+.. .+.....|...|++++|+|++ .+|++|+.||.|++||++..
T Consensus 219 ~~-~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg-~~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 219 RS-YLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSG-NVLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp SE-EEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTT-CCEEEECSSSCEECCBCCSS
T ss_pred CC-EEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCC-CEEEEEcCCCEEEEEecCCC
Confidence 66 999999999999999998532 222335688899999999999 89999999999999999853
No 94
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.91 E-value=8.9e-23 Score=208.84 Aligned_cols=204 Identities=20% Similarity=0.324 Sum_probs=170.2
Q ss_pred ccCcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCC
Q 018322 65 IGWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDS 144 (358)
Q Consensus 65 ~~wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (358)
..-|..++.|.|++ .+|++|+ .++.|.||++.
T Consensus 54 ~~~~v~~~~~s~~~-----------~~l~~~~-----~dg~i~vw~~~-------------------------------- 85 (814)
T 3mkq_A 54 TETPVRAGKFIARK-----------NWIIVGS-----DDFRIRVFNYN-------------------------------- 85 (814)
T ss_dssp CSSCEEEEEEEGGG-----------TEEEEEE-----TTSEEEEEETT--------------------------------
T ss_pred CCCcEEEEEEeCCC-----------CEEEEEe-----CCCeEEEEECC--------------------------------
Confidence 34577889999985 4788887 35699999873
Q ss_pred CCccCCCCCCCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEE
Q 018322 145 DDDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVK 224 (358)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (358)
.......+.+|.+.|++++|+|++ .+|++++.||.|++||+.. .......
T Consensus 86 ---------~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vw~~~~--------------------~~~~~~~ 135 (814)
T 3mkq_A 86 ---------TGEKVVDFEAHPDYIRSIAVHPTK-PYVLSGSDDLTVKLWNWEN--------------------NWALEQT 135 (814)
T ss_dssp ---------TCCEEEEEECCSSCEEEEEECSSS-SEEEEEETTSEEEEEEGGG--------------------TSEEEEE
T ss_pred ---------CCcEEEEEecCCCCEEEEEEeCCC-CEEEEEcCCCEEEEEECCC--------------------CceEEEE
Confidence 222335567899999999999999 6899999999999999976 2355667
Q ss_pred EcCCCCCeEEEEeCC-CCCCeEEEEeCCCcEEEEecCCCCCcccCCCcccc-CCCcEEEEEECC--CCCCEEEEEECCCc
Q 018322 225 FGGHKDEGYAIDWNP-ITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIG-HSASVEDLQWSP--TEPDVFASCSVDGH 300 (358)
Q Consensus 225 ~~~h~~~v~~l~~s~-~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~-h~~~V~~v~~sp--~~~~~las~s~Dg~ 300 (358)
+.+|...+.+++|+| ++. +|++|+.||.|++||+...... ..+.. |...|.+++|+| ++. +|++++.||.
T Consensus 136 ~~~~~~~v~~~~~~p~~~~-~l~~~~~dg~v~vwd~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~ 209 (814)
T 3mkq_A 136 FEGHEHFVMCVAFNPKDPS-TFASGCLDRTVKVWSLGQSTPN----FTLTTGQERGVNYVDYYPLPDKP-YMITASDDLT 209 (814)
T ss_dssp EECCSSCEEEEEEETTEEE-EEEEEETTSEEEEEETTCSSCS----EEEECCCTTCCCEEEECCSTTCC-EEEEECTTSE
T ss_pred EcCCCCcEEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCcce----eEEecCCCCCEEEEEEEECCCCC-EEEEEeCCCE
Confidence 889999999999999 665 9999999999999999764332 23333 448899999999 777 9999999999
Q ss_pred EEEEECCCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 301 IAIWDTRVGKSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 301 I~iwD~r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
|++||++++ .++..+..|...|++++|+|++ .+|++|+.||.|++||+++++
T Consensus 210 i~~~d~~~~-~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~v~vwd~~~~~ 261 (814)
T 3mkq_A 210 IKIWDYQTK-SCVATLEGHMSNVSFAVFHPTL-PIIISGSEDGTLKIWNSSTYK 261 (814)
T ss_dssp EEEEETTTT-EEEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTCS
T ss_pred EEEEECCCC-cEEEEEcCCCCCEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCc
Confidence 999999984 5777888999999999999999 899999999999999998754
No 95
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.91 E-value=2.7e-23 Score=191.75 Aligned_cols=124 Identities=15% Similarity=0.333 Sum_probs=106.6
Q ss_pred EEEecCCCceeEEEEcCCC--CcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCc-EEEcCCCCCeEEE
Q 018322 159 LRKVAHQGCVNRIRAMTQN--PHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPL-VKFGGHKDEGYAI 235 (358)
Q Consensus 159 ~~~~~H~~~V~~i~~~p~~--~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~h~~~v~~l 235 (358)
..+.+|.+.|++++|+|++ ..+||+|+.||.|+|||+... ...+ ..+.+|...|+++
T Consensus 33 ~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~--------------------~~~~~~~~~~h~~~v~~~ 92 (368)
T 3mmy_A 33 EVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDS--------------------GQTIPKAQQMHTGPVLDV 92 (368)
T ss_dssp ECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTT--------------------SCEEEEEEEECSSCEEEE
T ss_pred EeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCC--------------------CceeEEEeccccCCEEEE
Confidence 4567899999999999984 479999999999999999861 2333 6788899999999
Q ss_pred EeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEE--CCCCCCEEEEEECCCcEEEEECCCC
Q 018322 236 DWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQW--SPTEPDVFASCSVDGHIAIWDTRVG 309 (358)
Q Consensus 236 ~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~--sp~~~~~las~s~Dg~I~iwD~r~~ 309 (358)
+|+|++. +|++|+.||.|++||+.+.. . ..+.+|...|.+++| +|++. +|++|+.||.|++||++++
T Consensus 93 ~~~~~~~-~l~s~~~dg~v~iwd~~~~~-~----~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~ 161 (368)
T 3mmy_A 93 CWSDDGS-KVFTASCDKTAKMWDLSSNQ-A----IQIAQHDAPVKTIHWIKAPNYS-CVMTGSWDKTLKFWDTRSS 161 (368)
T ss_dssp EECTTSS-EEEEEETTSEEEEEETTTTE-E----EEEEECSSCEEEEEEEECSSCE-EEEEEETTSEEEEECSSCS
T ss_pred EECcCCC-EEEEEcCCCcEEEEEcCCCC-c----eeeccccCceEEEEEEeCCCCC-EEEEccCCCcEEEEECCCC
Confidence 9999998 99999999999999998743 2 235679999999999 88887 8999999999999999864
No 96
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.91 E-value=4.7e-23 Score=189.76 Aligned_cols=174 Identities=16% Similarity=0.256 Sum_probs=142.2
Q ss_pred CCeEEEEEecCCCceeEEEEcCCCCcEEEEEeC---CCcEEEEeCCCCccccccccccccCCCCCCCCCCCc-EEEcCCC
Q 018322 154 TPILQLRKVAHQGCVNRIRAMTQNPHICASWAD---TGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPL-VKFGGHK 229 (358)
Q Consensus 154 ~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~---dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~h~ 229 (358)
..++.....+|.+.|++++|+|+++.++++|+. ||.|+|||+.. .... ....+|.
T Consensus 7 ~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~---------------------~~~~~~~~~~~~ 65 (357)
T 3i2n_A 7 PQIIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQH---------------------GDLKLLREIEKA 65 (357)
T ss_dssp CCEEEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECS---------------------SSEEEEEEEEES
T ss_pred hHHhhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCC---------------------Ccccceeeeccc
Confidence 445556677899999999999999778888887 99999999986 2222 2234788
Q ss_pred CCeEEEEeCCC---CCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEE------CCCCCCEEEEEECCCc
Q 018322 230 DEGYAIDWNPI---TTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQW------SPTEPDVFASCSVDGH 300 (358)
Q Consensus 230 ~~v~~l~~s~~---~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~------sp~~~~~las~s~Dg~ 300 (358)
..|++++|+|+ +. +|++|+.||.|++||+.+.... ...+.+|...|.+++| +|++. +|++|+.||.
T Consensus 66 ~~v~~~~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~s~~~~-~l~~~~~d~~ 140 (357)
T 3i2n_A 66 KPIKCGTFGATSLQQR-YLATGDFGGNLHIWNLEAPEMP---VYSVKGHKEIINAIDGIGGLGIGEGAP-EIVTGSRDGT 140 (357)
T ss_dssp SCEEEEECTTCCTTTC-CEEEEETTSCEEEECTTSCSSC---SEEECCCSSCEEEEEEESGGGCC-CCC-EEEEEETTSC
T ss_pred CcEEEEEEcCCCCCCc-eEEEecCCCeEEEEeCCCCCcc---EEEEEecccceEEEeeccccccCCCcc-EEEEEeCCCe
Confidence 99999999998 46 9999999999999999875422 3567789999999954 67887 9999999999
Q ss_pred EEEEECCCCCCeeEEEecCCC----CeEEEE----EeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 301 IAIWDTRVGKSALTSFKAHNA----DVNVIS----WNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 301 I~iwD~r~~~~~~~~~~~h~~----~V~~i~----~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
|++||++.+..++..+..|.. .|++++ |+|++ .+|++|+.||.|++||+++.+
T Consensus 141 i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~ 201 (357)
T 3i2n_A 141 VKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEE-RVVCAGYDNGDIKLFDLRNMA 201 (357)
T ss_dssp EEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CC-CEEEEEETTSEEEEEETTTTE
T ss_pred EEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCC-CEEEEEccCCeEEEEECccCc
Confidence 999999986557777766554 799998 67888 899999999999999998765
No 97
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.91 E-value=8.4e-23 Score=186.07 Aligned_cols=167 Identities=12% Similarity=0.120 Sum_probs=126.2
Q ss_pred EEEEEecCCCceeEEEEcC---CCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCC---C
Q 018322 157 LQLRKVAHQGCVNRIRAMT---QNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHK---D 230 (358)
Q Consensus 157 ~~~~~~~H~~~V~~i~~~p---~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~---~ 230 (358)
.......|...++.++|++ ++ .+||+++.|++|+|||+.+ ++.+.++.+|. .
T Consensus 170 ~~~s~~~~~~~v~~l~fs~~~g~~-~~LaSgS~D~TIkIWDl~T---------------------Gk~l~tL~g~~~~v~ 227 (356)
T 2w18_A 170 GKENQFLMPPEETILTFAEVQGMQ-EALLGTTIMNNIVIWNLKT---------------------GQLLKKMHIDDSYQA 227 (356)
T ss_dssp EEEEEEECCCSSCEEEEEEEETST-TEEEEEETTSEEEEEETTT---------------------CCEEEEEECCC---C
T ss_pred eeeeeccCCCceeeEEeeccCCCC-ceEEEecCCCcEEEEECCC---------------------CcEEEEEcCCCccee
Confidence 3345668899999999988 44 7999999999999999987 67778887654 3
Q ss_pred CeEEEEeCCCCCCeE------------EEEeCCCcEEEEecCCCCCcccCCCc-cccCCCcEEEEEECCCCCCEEEEEEC
Q 018322 231 EGYAIDWNPITTGRL------------VTGDCNSCIYLWEPASDATWNVDPNP-FIGHSASVEDLQWSPTEPDVFASCSV 297 (358)
Q Consensus 231 ~v~~l~~s~~~~~~l------------~sgs~dg~I~lwd~~~~~~~~~~~~~-~~~h~~~V~~v~~sp~~~~~las~s~ 297 (358)
.+.+++|+|++. ++ ++|+.|++|++||+.++....+.... -.+|...+.+..++ +. ++|+|+.
T Consensus 228 ~v~~vafSpdG~-~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~-~lASgS~ 303 (356)
T 2w18_A 228 SVCHKAYSEMGL-LFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DH-CAAAILT 303 (356)
T ss_dssp CCEEEEEEETTE-EEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TT-EEEEEET
T ss_pred eeEEEEECCCCC-EEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CC-EEEEEcC
Confidence 677889999886 54 67889999999999763221100000 13676666655555 55 8999999
Q ss_pred CCcEEEEECCCCCCeeEEEecCCCCeE-EEEEeCCCCcEEEEEeCCCCEEEEeCC
Q 018322 298 DGHIAIWDTRVGKSALTSFKAHNADVN-VISWNRLASCLLASGSDDGTFSIHDLR 351 (358)
Q Consensus 298 Dg~I~iwD~r~~~~~~~~~~~h~~~V~-~i~~~p~~~~~lasgs~Dg~i~iwDlr 351 (358)
|++|+|||++++ +++.++.+|...+. +++|+|++ .+|+||+.|++|+|||+.
T Consensus 304 DgTIkIWDl~tG-k~l~tL~gH~~~vvs~vafSPDG-~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 304 SGTIAIWDLLLG-QCTALLPPVSDQHWSFVKWSGTD-SHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp TSCEEEEETTTC-SEEEEECCC--CCCCEEEECSSS-SEEEEECTTSCEEEEEEC
T ss_pred CCcEEEEECCCC-cEEEEecCCCCCeEEEEEECCCC-CEEEEEECCCcEEEecCC
Confidence 999999999985 58888988877655 68999999 999999999999999963
No 98
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.91 E-value=2.7e-23 Score=197.83 Aligned_cols=215 Identities=14% Similarity=0.161 Sum_probs=158.8
Q ss_pred CcceeEEEEe-ccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018322 67 WPCLSFDIVR-DTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (358)
Q Consensus 67 wP~ls~~~~~-d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (358)
-+..++.|.| ++ .+|++|+ .++.|.||++..+.....
T Consensus 64 ~~V~~~~~s~~~~-----------~~l~s~s-----~dg~v~vwd~~~~~~~~~-------------------------- 101 (437)
T 3gre_A 64 NSITSSAVSPGET-----------PYLITGS-----DQGVIKIWNLKEIIVGEV-------------------------- 101 (437)
T ss_dssp SCEEEEEEECSSS-----------CEEEEEE-----TTSEEEEEEHHHHHTTCC--------------------------
T ss_pred CceEEEEECCCCC-----------CEEEEec-----CCceEEEeECcccccCcc--------------------------
Confidence 4677888888 64 4788887 567999999853211000
Q ss_pred CccCCCCCCCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCcc--ccccccccccCCCCCCCCCCCcE
Q 018322 146 DDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLN--ALAESETIVGQGAPQVSNQSPLV 223 (358)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 223 (358)
..+.+ ...|.+.|++++|+|++ .+|++++.||+|+|||+..... ..... ...++.
T Consensus 102 -------~~~~~---~~~h~~~v~~~~~~~~~-~~l~s~s~dg~i~vwd~~~~~~~~~~~~~------------~~~~i~ 158 (437)
T 3gre_A 102 -------YSSSL---TYDCSSTVTQITMIPNF-DAFAVSSKDGQIIVLKVNHYQQESEVKFL------------NCECIR 158 (437)
T ss_dssp -------CSCSE---EEECSSCEEEEEECTTS-SEEEEEETTSEEEEEEEEEEEETTEEEEE------------EEEEEE
T ss_pred -------cceee---eccCCCCEEEEEEeCCC-CEEEEEeCCCEEEEEEeccccCCceeecc------------ccceeE
Confidence 01222 23599999999999988 7999999999999999952100 00000 001122
Q ss_pred EEc--C--CCCCeEEEE--eCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCcccc--CCCcEEEEEECCCCCCEEEEE
Q 018322 224 KFG--G--HKDEGYAID--WNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIG--HSASVEDLQWSPTEPDVFASC 295 (358)
Q Consensus 224 ~~~--~--h~~~v~~l~--~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~--h~~~V~~v~~sp~~~~~las~ 295 (358)
.+. . +...+.++. +++++. +|++|+.||.|++||+++... . ..+.+ |...|.+++|+|++. +|++|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~-~---~~~~~~~h~~~v~~~~~s~~~~-~l~s~ 232 (437)
T 3gre_A 159 KINLKNFGKNEYAVRMRAFVNEEKS-LLVALTNLSRVIIFDIRTLER-L---QIIENSPRHGAVSSICIDEECC-VLILG 232 (437)
T ss_dssp EEEGGGGSSCCCEEEEEEEECSSCE-EEEEEETTSEEEEEETTTCCE-E---EEEECCGGGCCEEEEEECTTSC-EEEEE
T ss_pred EEEccCcccccCceEEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCee-e---EEEccCCCCCceEEEEECCCCC-EEEEE
Confidence 221 1 455677777 667777 999999999999999987432 2 45555 889999999999988 99999
Q ss_pred ECCCcEEEEECCCCCCeeEEEe-cCCCCeEEEEEeC----CCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 296 SVDGHIAIWDTRVGKSALTSFK-AHNADVNVISWNR----LASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 296 s~Dg~I~iwD~r~~~~~~~~~~-~h~~~V~~i~~~p----~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
+.||.|++||++.+ .++..+. .|...|++++|+| ++ .+|++|+.||.|+|||+++++
T Consensus 233 ~~dg~i~iwd~~~~-~~~~~~~~~~~~~v~~~~~~~~~s~~~-~~l~s~~~dg~i~iwd~~~~~ 294 (437)
T 3gre_A 233 TTRGIIDIWDIRFN-VLIRSWSFGDHAPITHVEVCQFYGKNS-VIVVGGSSKTFLTIWNFVKGH 294 (437)
T ss_dssp ETTSCEEEEETTTT-EEEEEEBCTTCEEEEEEEECTTTCTTE-EEEEEESTTEEEEEEETTTTE
T ss_pred cCCCeEEEEEcCCc-cEEEEEecCCCCceEEEEeccccCCCc-cEEEEEcCCCcEEEEEcCCCc
Confidence 99999999999984 5666665 7888999997775 45 799999999999999998765
No 99
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.91 E-value=5.7e-22 Score=188.26 Aligned_cols=169 Identities=22% Similarity=0.381 Sum_probs=146.0
Q ss_pred EEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEE
Q 018322 157 LQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAID 236 (358)
Q Consensus 157 ~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 236 (358)
..+...+|.+.|++|+|+|++ .+||+|+.||+|+|||+.. .+.+..+.+|...+.+++
T Consensus 139 ~~~~~~~~~~~V~sv~fspdg-~~lasgs~Dg~v~iWd~~~---------------------~~~~~~~~~h~~~v~~~s 196 (420)
T 4gga_A 139 QLLQMEQPGEYISSVAWIKEG-NYLAVGTSSAEVQLWDVQQ---------------------QKRLRNMTSHSARVGSLS 196 (420)
T ss_dssp EEEECCSTTCCEEEEEECTTS-SEEEEEETTSCEEEEETTT---------------------TEEEEEECCCSSCEEEEE
T ss_pred EEEEecCCCCcEEEEEECCCC-CEEEEEECCCeEEEEEcCC---------------------CcEEEEEeCCCCceEEEe
Confidence 335566788999999999999 7999999999999999987 567788999999999999
Q ss_pred eCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCC---ee
Q 018322 237 WNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKS---AL 313 (358)
Q Consensus 237 ~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~---~~ 313 (358)
|++ . +|++|+.|+.+++||........ ..+.+|...+..+.|+|.+. ++++++.|+.|++||.+.+.. .+
T Consensus 197 ~~~--~-~l~sgs~d~~i~~~d~~~~~~~~---~~~~~h~~~~~~~~~~~~g~-~l~s~~~D~~v~i~~~~~~~~~~~~~ 269 (420)
T 4gga_A 197 WNS--Y-ILSSGSRSGHIHHHDVRVAEHHV---ATLSGHSQEVCGLRWAPDGR-HLASGGNDNLVNVWPSAPGEGGWVPL 269 (420)
T ss_dssp EET--T-EEEEEETTSEEEEEETTSSSCEE---EEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEESSCCSSCSCCS
T ss_pred eCC--C-EEEEEeCCCceeEeeecccceee---EEecccccceeeeeecCCCC-eeeeeeccccceEEeeccccccceee
Confidence 964 3 99999999999999997744333 56788999999999999998 999999999999999987542 45
Q ss_pred EEEecCCCCeEEEEEeCCCCcEEEEE--eCCCCEEEEeCCCCC
Q 018322 314 TSFKAHNADVNVISWNRLASCLLASG--SDDGTFSIHDLRLLK 354 (358)
Q Consensus 314 ~~~~~h~~~V~~i~~~p~~~~~lasg--s~Dg~i~iwDlr~~~ 354 (358)
.....|...|.+++|+|.+..+++++ +.|++|+|||+++++
T Consensus 270 ~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~ 312 (420)
T 4gga_A 270 QTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA 312 (420)
T ss_dssp EEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTE
T ss_pred eeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccc
Confidence 66788999999999999987888775 479999999998764
No 100
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.90 E-value=1.6e-22 Score=199.83 Aligned_cols=174 Identities=14% Similarity=0.158 Sum_probs=146.3
Q ss_pred EEEEecCCCc-eeEEEEcC--CCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEE
Q 018322 158 QLRKVAHQGC-VNRIRAMT--QNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYA 234 (358)
Q Consensus 158 ~~~~~~H~~~-V~~i~~~p--~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 234 (358)
...+.+|.+. |++++|+| ++ .+||+++.||.|+|||+......... ....+..+.+|...|.+
T Consensus 56 ~~~~~~h~~~~v~~~~~sp~~~~-~~l~s~~~dg~v~vw~~~~~~~~~~~-------------~~~~~~~~~~~~~~v~~ 121 (615)
T 1pgu_A 56 VVQFTGHGSSVVTTVKFSPIKGS-QYLCSGDESGKVIVWGWTFDKESNSV-------------EVNVKSEFQVLAGPISD 121 (615)
T ss_dssp EEEECTTTTSCEEEEEECSSTTC-CEEEEEETTSEEEEEEEEEEGGGTEE-------------EEEEEEEEECCSSCEEE
T ss_pred ceEEecCCCceEEEEEECcCCCC-CEEEEecCCCEEEEEeCCCCcccccc-------------cccccchhhcccccEEE
Confidence 3567789999 99999999 88 79999999999999999641000000 02455678889999999
Q ss_pred EEeCCCCCCeEEEEeCC----CcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCC
Q 018322 235 IDWNPITTGRLVTGDCN----SCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGK 310 (358)
Q Consensus 235 l~~s~~~~~~l~sgs~d----g~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~ 310 (358)
++|+|++. +|++++.+ +.|++||.. .. ...+.+|...|.+++|+|++..+|++++.|+.|++||++..
T Consensus 122 ~~~s~~~~-~l~~~~~~~~~~~~v~~~d~~---~~---~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~- 193 (615)
T 1pgu_A 122 ISWDFEGR-RLCVVGEGRDNFGVFISWDSG---NS---LGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPF- 193 (615)
T ss_dssp EEECTTSS-EEEEEECCSSCSEEEEETTTC---CE---EEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTB-
T ss_pred EEEeCCCC-EEEEeccCCCCccEEEEEECC---Cc---ceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCc-
Confidence 99999998 99999887 799999842 22 25677899999999999999878999999999999999874
Q ss_pred CeeEEEecCCC---CeEEEEEeCC-CCcEEEEEeCCCCEEEEeCCCCC
Q 018322 311 SALTSFKAHNA---DVNVISWNRL-ASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 311 ~~~~~~~~h~~---~V~~i~~~p~-~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
.++..+..|.. .|++++|+|+ + .+|++|+.||.|++||+++.+
T Consensus 194 ~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~ 240 (615)
T 1pgu_A 194 KFSASDRTHHKQGSFVRDVEFSPDSG-EFVITVGSDRKISCFDGKSGE 240 (615)
T ss_dssp EEEEEECSSSCTTCCEEEEEECSTTC-CEEEEEETTCCEEEEETTTCC
T ss_pred ceeeeecccCCCCceEEEEEECCCCC-CEEEEEeCCCeEEEEECCCCC
Confidence 57778888998 9999999999 7 899999999999999998765
No 101
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.90 E-value=6.9e-22 Score=183.81 Aligned_cols=163 Identities=17% Similarity=0.210 Sum_probs=121.2
Q ss_pred ceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCC----
Q 018322 167 CVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITT---- 242 (358)
Q Consensus 167 ~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~---- 242 (358)
.+..+.+.+.+..++++++.+++|+|||+... +++..+. |...|.+++|+++..
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~---------------------~~~~~~~-~~~~v~~v~~~~~~~~~~~ 117 (355)
T 3vu4_A 60 HLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKK---------------------QDVSRIK-VDAPVKDLFLSREFIVVSY 117 (355)
T ss_dssp CCCEEEECTTSSEEEEECSSTTEEEEEETTTT---------------------EEEEEEE-CSSCEEEEEECSSEEEEEE
T ss_pred CeEEEEEcCCCCEEEEEECCccEEEEEECCCC---------------------cEEEEEE-CCCceEEEEEcCCEEEEEE
Confidence 58888898888556677888999999998762 2222222 222333333333210
Q ss_pred ------------------------------CeEEE--EeCCCcEEEEecCCCCCcc-----------cC-CCccccCCCc
Q 018322 243 ------------------------------GRLVT--GDCNSCIYLWEPASDATWN-----------VD-PNPFIGHSAS 278 (358)
Q Consensus 243 ------------------------------~~l~s--gs~dg~I~lwd~~~~~~~~-----------~~-~~~~~~h~~~ 278 (358)
.+++. |+.+|.|++||+++..... .. ...+.+|...
T Consensus 118 ~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~ 197 (355)
T 3vu4_A 118 GDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNP 197 (355)
T ss_dssp TTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSC
T ss_pred cCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCc
Confidence 14554 5788999999987643100 01 3557889999
Q ss_pred EEEEEECCCCCCEEEEEECCCc-EEEEECCCCCCeeEEEe-c-CCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 279 VEDLQWSPTEPDVFASCSVDGH-IAIWDTRVGKSALTSFK-A-HNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 279 V~~v~~sp~~~~~las~s~Dg~-I~iwD~r~~~~~~~~~~-~-h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
|.+++|+|++. +||+|+.||+ |+|||++++ .++..+. + |...|++++|+|++ .+|++|+.|++|+|||++...
T Consensus 198 v~~~~~s~~g~-~l~s~s~d~~~v~iwd~~~~-~~~~~~~~g~h~~~v~~~~~s~~~-~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 198 IKMVRLNRKSD-MVATCSQDGTIIRVFKTEDG-VLVREFRRGLDRADVVDMKWSTDG-SKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp EEEEEECTTSS-EEEEEETTCSEEEEEETTTC-CEEEEEECTTCCSCEEEEEECTTS-CEEEEEETTCEEEEEESSCCS
T ss_pred eEEEEECCCCC-EEEEEeCCCCEEEEEECCCC-cEEEEEEcCCCCCcEEEEEECCCC-CEEEEEECCCEEEEEEccCCC
Confidence 99999999998 9999999998 999999985 5777776 4 99999999999999 999999999999999998653
No 102
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.90 E-value=7.3e-22 Score=189.34 Aligned_cols=187 Identities=17% Similarity=0.198 Sum_probs=143.6
Q ss_pred eEEEEEecCCCceeEEEEcC--CCCcEEEEEeCCCcEEEEeCCCCcccccccccccc--CCCCCCCCCCCcEEEcCCCCC
Q 018322 156 ILQLRKVAHQGCVNRIRAMT--QNPHICASWADTGHVQVWDLRSHLNALAESETIVG--QGAPQVSNQSPLVKFGGHKDE 231 (358)
Q Consensus 156 ~~~~~~~~H~~~V~~i~~~p--~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~h~~~ 231 (358)
.....+.+|.+.|+++.|++ ++ .++++|+.||+|++||+............... ...........+..+.+|...
T Consensus 194 ~~~~~~~~h~~~v~~l~~~~~~~~-~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (464)
T 3v7d_B 194 CCTHVFEGHNSTVRCLDIVEYKNI-KYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMAS 272 (464)
T ss_dssp EEEEEECCCSSCEEEEEEEESSSC-EEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSC
T ss_pred cEEEEECCCCCccEEEEEecCCCC-CEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccce
Confidence 34456678999999999995 44 79999999999999999873221110000000 000000011235678899999
Q ss_pred eEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCC
Q 018322 232 GYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKS 311 (358)
Q Consensus 232 v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~ 311 (358)
+.++. +++. +|++|+.||.|++||+++. ... ..+.+|...|.+++|+|++. .+++|+.||.|++||++++ .
T Consensus 273 v~~~~--~~~~-~l~~~~~d~~i~vwd~~~~-~~~---~~~~~~~~~v~~~~~~~~~~-~l~sg~~dg~i~vwd~~~~-~ 343 (464)
T 3v7d_B 273 VRTVS--GHGN-IVVSGSYDNTLIVWDVAQM-KCL---YILSGHTDRIYSTIYDHERK-RCISASMDTTIRIWDLENG-E 343 (464)
T ss_dssp EEEEE--EETT-EEEEEETTSCEEEEETTTT-EEE---EEECCCSSCEEEEEEETTTT-EEEEEETTSCEEEEETTTT-E
T ss_pred EEEEc--CCCC-EEEEEeCCCeEEEEECCCC-cEE---EEecCCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCCC-c
Confidence 98884 5565 9999999999999999873 322 56778999999999999998 9999999999999999985 5
Q ss_pred eeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCCC
Q 018322 312 ALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKV 355 (358)
Q Consensus 312 ~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~~ 355 (358)
++..+.+|...|++++|++ .+|++|+.||.|++||+++...
T Consensus 344 ~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~v~vwd~~~~~~ 384 (464)
T 3v7d_B 344 LMYTLQGHTALVGLLRLSD---KFLVSAAADGSIRGWDANDYSR 384 (464)
T ss_dssp EEEEECCCSSCEEEEEECS---SEEEEEETTSEEEEEETTTCCE
T ss_pred EEEEEeCCCCcEEEEEEcC---CEEEEEeCCCcEEEEECCCCce
Confidence 8888899999999999983 7899999999999999998653
No 103
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.90 E-value=2e-21 Score=175.48 Aligned_cols=196 Identities=16% Similarity=0.220 Sum_probs=159.0
Q ss_pred CcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018322 67 WPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDD 146 (358)
Q Consensus 67 wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (358)
-+..++.| |++ .+|++|+ .++.|.||++.
T Consensus 19 ~~v~~~~~-~~~-----------~~l~s~~-----~dg~v~vw~~~---------------------------------- 47 (313)
T 3odt_A 19 QDVRDVVA-VDD-----------SKVASVS-----RDGTVRLWSKD---------------------------------- 47 (313)
T ss_dssp SCEEEEEE-EET-----------TEEEEEE-----TTSEEEEEEES----------------------------------
T ss_pred CCcEEEEe-cCC-----------CEEEEEE-----cCCcEEEEECC----------------------------------
Confidence 35567777 664 3678887 56799999883
Q ss_pred ccCCCCCCCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEc
Q 018322 147 DEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG 226 (358)
Q Consensus 147 ~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (358)
..........|.+.|++++|+|++ .++++++.||.|++|++.... ...++..+.
T Consensus 48 -------~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~~~~~~~------------------~~~~~~~~~ 101 (313)
T 3odt_A 48 -------DQWLGTVVYTGQGFLNSVCYDSEK-ELLLFGGKDTMINGVPLFATS------------------GEDPLYTLI 101 (313)
T ss_dssp -------SSEEEEEEEECSSCEEEEEEETTT-TEEEEEETTSCEEEEETTCCT------------------TSCC-CEEC
T ss_pred -------CCEEEEEeecCCccEEEEEECCCC-CEEEEecCCCeEEEEEeeecC------------------CCCcccchh
Confidence 233445667899999999999998 799999999999999997621 235667788
Q ss_pred CCCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECC-CCCCEEEEEECCCcEEEEE
Q 018322 227 GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSP-TEPDVFASCSVDGHIAIWD 305 (358)
Q Consensus 227 ~h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp-~~~~~las~s~Dg~I~iwD 305 (358)
+|...+.+++| ++. +|++|+.||.|++||. ... ...+..|...|.+++|+| ++. +|++++.||.|++||
T Consensus 102 ~~~~~i~~~~~--~~~-~l~~~~~d~~i~~~d~---~~~---~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~d~~i~i~d 171 (313)
T 3odt_A 102 GHQGNVCSLSF--QDG-VVISGSWDKTAKVWKE---GSL---VYNLQAHNASVWDAKVVSFSEN-KFLTASADKTIKLWQ 171 (313)
T ss_dssp CCSSCEEEEEE--ETT-EEEEEETTSEEEEEET---TEE---EEEEECCSSCEEEEEEEETTTT-EEEEEETTSCEEEEE
T ss_pred hcccCEEEEEe--cCC-EEEEEeCCCCEEEEcC---CcE---EEecccCCCceeEEEEccCCCC-EEEEEECCCCEEEEe
Confidence 99999999999 344 9999999999999992 222 256778999999999998 555 999999999999999
Q ss_pred CCCCCCeeEEEec-CCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 306 TRVGKSALTSFKA-HNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 306 ~r~~~~~~~~~~~-h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
.+ .....+.. |...|++++|+|++ . |++|+.||.|++||+++.+
T Consensus 172 ~~---~~~~~~~~~~~~~i~~~~~~~~~-~-~~~~~~dg~i~i~d~~~~~ 216 (313)
T 3odt_A 172 ND---KVIKTFSGIHNDVVRHLAVVDDG-H-FISCSNDGLIKLVDMHTGD 216 (313)
T ss_dssp TT---EEEEEECSSCSSCEEEEEEEETT-E-EEEEETTSEEEEEETTTCC
T ss_pred cC---ceEEEEeccCcccEEEEEEcCCC-e-EEEccCCCeEEEEECCchh
Confidence 43 35566665 99999999999999 5 8999999999999998765
No 104
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.90 E-value=1.2e-21 Score=187.64 Aligned_cols=168 Identities=15% Similarity=0.118 Sum_probs=136.7
Q ss_pred eEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCC-CcEEEcCCCCCeEE
Q 018322 156 ILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQS-PLVKFGGHKDEGYA 234 (358)
Q Consensus 156 ~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~h~~~v~~ 234 (358)
...+....|...|++++|+|++ .+|++++.+|.|++|++..... .. +...+.+|...|++
T Consensus 140 ~~~~~~~~~~~~v~~~~~sp~~-~~l~~~~~~g~v~~~~~~~~~~------------------~~~~~~~~~~h~~~v~~ 200 (450)
T 2vdu_B 140 LKLRKRFCFSKRPNAISIAEDD-TTVIIADKFGDVYSIDINSIPE------------------EKFTQEPILGHVSMLTD 200 (450)
T ss_dssp EEEEEEEECSSCEEEEEECTTS-SEEEEEETTSEEEEEETTSCCC------------------SSCCCCCSEECSSCEEE
T ss_pred eeeeecccCCCCceEEEEcCCC-CEEEEEeCCCcEEEEecCCccc------------------ccccceeeecccCceEE
Confidence 3334445788999999999999 7999999999999999976210 11 33466789999999
Q ss_pred EEeCCC---CCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCC
Q 018322 235 IDWNPI---TTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKS 311 (358)
Q Consensus 235 l~~s~~---~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~ 311 (358)
++|+|+ +. +|++|+.|+.|++||++++.... ..+.+|...|.+++|+ ++. +|++|+.|+.|+|||++++ .
T Consensus 201 ~~~sp~~~~~~-~l~s~~~d~~i~vwd~~~~~~~~---~~~~~h~~~v~~~~~s-d~~-~l~s~~~d~~v~vwd~~~~-~ 273 (450)
T 2vdu_B 201 VHLIKDSDGHQ-FIITSDRDEHIKISHYPQCFIVD---KWLFGHKHFVSSICCG-KDY-LLLSAGGDDKIFAWDWKTG-K 273 (450)
T ss_dssp EEEEECTTSCE-EEEEEETTSCEEEEEESCTTCEE---EECCCCSSCEEEEEEC-STT-EEEEEESSSEEEEEETTTC-C
T ss_pred EEEcCCCCCCc-EEEEEcCCCcEEEEECCCCceee---eeecCCCCceEEEEEC-CCC-EEEEEeCCCeEEEEECCCC-c
Confidence 999999 76 99999999999999998743211 2255899999999999 887 9999999999999999985 4
Q ss_pred eeEEEe-------------------------cCCCCeEEEEEeCCCCcEEEEEe-CCCCEEEEeC
Q 018322 312 ALTSFK-------------------------AHNADVNVISWNRLASCLLASGS-DDGTFSIHDL 350 (358)
Q Consensus 312 ~~~~~~-------------------------~h~~~V~~i~~~p~~~~~lasgs-~Dg~i~iwDl 350 (358)
++..+. .+...|..|+|+|++ .+|++++ .++.|+||++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~-~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 274 NLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNL-PFVAFFVEATKCIIILEM 337 (450)
T ss_dssp EEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSS-SEEEEEETTCSEEEEEEE
T ss_pred EeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCC-CEEEEEECCCCeEEEEEe
Confidence 555554 234579999999999 7888887 8999999999
No 105
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.90 E-value=2.9e-22 Score=214.46 Aligned_cols=167 Identities=21% Similarity=0.281 Sum_probs=150.2
Q ss_pred EEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeC
Q 018322 159 LRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWN 238 (358)
Q Consensus 159 ~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 238 (358)
..+.+|.+.|++++|+|++ .++|+|+.||+|+|||+.. ...+..+.+|...|.+++|+
T Consensus 609 ~~~~~h~~~v~~~~~s~~~-~~l~s~~~d~~i~vw~~~~---------------------~~~~~~~~~h~~~v~~~~~s 666 (1249)
T 3sfz_A 609 LVVRPHTDAVYHACFSQDG-QRIASCGADKTLQVFKAET---------------------GEKLLDIKAHEDEVLCCAFS 666 (1249)
T ss_dssp EEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTT---------------------CCEEEEECCCSSCEEEEEEC
T ss_pred EEEecccccEEEEEECCCC-CEEEEEeCCCeEEEEECCC---------------------CCEEEEeccCCCCEEEEEEe
Confidence 5677899999999999999 7999999999999999987 57778899999999999999
Q ss_pred CCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCC-CCEEEEEECCCcEEEEECCCCCCeeEEEe
Q 018322 239 PITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTE-PDVFASCSVDGHIAIWDTRVGKSALTSFK 317 (358)
Q Consensus 239 ~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~-~~~las~s~Dg~I~iwD~r~~~~~~~~~~ 317 (358)
|++. +|++|+.||.|++||+.++ ... ..+.+|...|.+++|+|++ ..++++|+.||.|++||++++ .++..+.
T Consensus 667 ~~~~-~l~s~~~d~~v~vwd~~~~-~~~---~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~-~~~~~~~ 740 (1249)
T 3sfz_A 667 SDDS-YIATCSADKKVKIWDSATG-KLV---HTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQK-ECRNTMF 740 (1249)
T ss_dssp TTSS-EEEEEETTSEEEEEETTTC-CEE---EEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSS-SEEEEEC
T ss_pred cCCC-EEEEEeCCCeEEEEECCCC-ceE---EEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCc-chhheec
Confidence 9998 9999999999999999874 333 5678899999999999953 338999999999999999985 5778889
Q ss_pred cCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 318 AHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 318 ~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
+|...|++++|+|++ .+|++|+.||.|++||+++.+
T Consensus 741 ~h~~~v~~~~~sp~~-~~l~s~s~dg~v~vwd~~~~~ 776 (1249)
T 3sfz_A 741 GHTNSVNHCRFSPDD-ELLASCSADGTLRLWDVRSAN 776 (1249)
T ss_dssp CCSSCEEEEEECSST-TEEEEEESSSEEEEEEGGGTE
T ss_pred CCCCCEEEEEEecCC-CEEEEEECCCeEEEEeCCCCc
Confidence 999999999999999 899999999999999997653
No 106
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.90 E-value=1.5e-22 Score=192.55 Aligned_cols=160 Identities=14% Similarity=0.237 Sum_probs=127.6
Q ss_pred CCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEc-CCCCCeEEEEeCCC--
Q 018322 164 HQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG-GHKDEGYAIDWNPI-- 240 (358)
Q Consensus 164 H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~s~~-- 240 (358)
|.+.|++++|+|++ .+|++|+.||.|+|||+.. ..++..+. .|...|.+++|+|.
T Consensus 213 h~~~v~~~~~s~~~-~~l~s~~~dg~i~iwd~~~---------------------~~~~~~~~~~~~~~v~~~~~~~~~s 270 (437)
T 3gre_A 213 RHGAVSSICIDEEC-CVLILGTTRGIIDIWDIRF---------------------NVLIRSWSFGDHAPITHVEVCQFYG 270 (437)
T ss_dssp GGCCEEEEEECTTS-CEEEEEETTSCEEEEETTT---------------------TEEEEEEBCTTCEEEEEEEECTTTC
T ss_pred CCCceEEEEECCCC-CEEEEEcCCCeEEEEEcCC---------------------ccEEEEEecCCCCceEEEEeccccC
Confidence 89999999999998 7999999999999999987 45666665 77789999977754
Q ss_pred --CCCeEEEEeCCCcEEEEecCCCCCcccC--------------------CCcccc--CCCcEEEEEECCCCCCEEEEEE
Q 018322 241 --TTGRLVTGDCNSCIYLWEPASDATWNVD--------------------PNPFIG--HSASVEDLQWSPTEPDVFASCS 296 (358)
Q Consensus 241 --~~~~l~sgs~dg~I~lwd~~~~~~~~~~--------------------~~~~~~--h~~~V~~v~~sp~~~~~las~s 296 (358)
+. +|++|+.||.|++||++++...... ...+.+ |...|.+++|+ ++. +|++|+
T Consensus 271 ~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~-~l~s~~ 347 (437)
T 3gre_A 271 KNSV-IVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDK-ILLTDE 347 (437)
T ss_dssp TTEE-EEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTE-EEEEEG
T ss_pred CCcc-EEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cce-EEEecC
Confidence 54 8999999999999999864311000 001233 78889999999 555 999999
Q ss_pred CCCcEEEEECCCCCCeeEEEec-------------------------------------CCCCeEEEEEeCC-CCcEEEE
Q 018322 297 VDGHIAIWDTRVGKSALTSFKA-------------------------------------HNADVNVISWNRL-ASCLLAS 338 (358)
Q Consensus 297 ~Dg~I~iwD~r~~~~~~~~~~~-------------------------------------h~~~V~~i~~~p~-~~~~las 338 (358)
.||.|++||++++. +...+.. |...|++|+|++. ...+|+|
T Consensus 348 ~d~~i~~wd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s 426 (437)
T 3gre_A 348 ATSSIVMFSLNELS-SSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVA 426 (437)
T ss_dssp GGTEEEEEETTCGG-GCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEE
T ss_pred CCCeEEEEECCCcc-cceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEE
Confidence 99999999999853 3333332 8999999999998 2279999
Q ss_pred EeCCCCEEEEe
Q 018322 339 GSDDGTFSIHD 349 (358)
Q Consensus 339 gs~Dg~i~iwD 349 (358)
|+.||.|+||.
T Consensus 427 ~~~dG~I~iw~ 437 (437)
T 3gre_A 427 CDNSGLIGIFQ 437 (437)
T ss_dssp EETTSCEEEEC
T ss_pred EcCCceEEEeC
Confidence 99999999995
No 107
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.89 E-value=2.1e-21 Score=185.11 Aligned_cols=163 Identities=21% Similarity=0.367 Sum_probs=139.4
Q ss_pred EEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEE
Q 018322 157 LQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAID 236 (358)
Q Consensus 157 ~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 236 (358)
....+.+|.+.|+++.| ++ .+|++|+.||+|++||+.. ...+..+.+|...|.+++
T Consensus 165 ~~~~~~~h~~~v~~l~~--~~-~~l~sg~~dg~i~vwd~~~---------------------~~~~~~~~~h~~~v~~l~ 220 (435)
T 1p22_A 165 CKRILTGHTGSVLCLQY--DE-RVIITGSSDSTVRVWDVNT---------------------GEMLNTLIHHCEAVLHLR 220 (435)
T ss_dssp EEEEECCCSSCEEEEEC--CS-SEEEEEETTSCEEEEESSS---------------------CCEEEEECCCCSCEEEEE
T ss_pred EEEEEcCCCCcEEEEEE--CC-CEEEEEcCCCeEEEEECCC---------------------CcEEEEEcCCCCcEEEEE
Confidence 34566789999999999 44 6999999999999999987 567788899999999999
Q ss_pred eCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEE
Q 018322 237 WNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSF 316 (358)
Q Consensus 237 ~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~ 316 (358)
|++ ++|++|+.||.|++||+.+.... .....+.+|...|.+++| ++. +|++|+.||.|++||++++ .++..+
T Consensus 221 ~~~---~~l~s~s~dg~i~vwd~~~~~~~-~~~~~~~~~~~~v~~~~~--~~~-~l~s~~~dg~i~vwd~~~~-~~~~~~ 292 (435)
T 1p22_A 221 FNN---GMMVTCSKDRSIAVWDMASPTDI-TLRRVLVGHRAAVNVVDF--DDK-YIVSASGDRTIKVWNTSTC-EFVRTL 292 (435)
T ss_dssp CCT---TEEEEEETTSCEEEEECSSSSCC-EEEEEECCCSSCEEEEEE--ETT-EEEEEETTSEEEEEETTTC-CEEEEE
T ss_pred EcC---CEEEEeeCCCcEEEEeCCCCCCc-eeeeEecCCCCcEEEEEe--CCC-EEEEEeCCCeEEEEECCcC-cEEEEE
Confidence 974 39999999999999999874332 112456789999999999 455 9999999999999999985 578888
Q ss_pred ecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 317 KAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 317 ~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
..|...|.+++|+ + .+|++|+.||.|++||+++++
T Consensus 293 ~~~~~~v~~~~~~--~-~~l~~g~~dg~i~iwd~~~~~ 327 (435)
T 1p22_A 293 NGHKRGIACLQYR--D-RLVVSGSSDNTIRLWDIECGA 327 (435)
T ss_dssp ECCSSCEEEEEEE--T-TEEEEEETTSCEEEEETTTCC
T ss_pred cCCCCcEEEEEeC--C-CEEEEEeCCCeEEEEECCCCC
Confidence 9999999999995 4 789999999999999999765
No 108
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.89 E-value=7e-23 Score=193.18 Aligned_cols=154 Identities=14% Similarity=0.142 Sum_probs=119.6
Q ss_pred cEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCC--------CCCCeEEEEeC
Q 018322 179 HICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNP--------ITTGRLVTGDC 250 (358)
Q Consensus 179 ~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~--------~~~~~l~sgs~ 250 (358)
.++|+++.|++|+|||+...... ...++..+.+|.+.|++|+|+| ++. +||||+.
T Consensus 102 ~~las~~~d~~v~lw~~~~~~~~----------------~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~-~las~s~ 164 (393)
T 4gq1_A 102 LFLACVCQDNTVRLIITKNETII----------------TQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQ-VIASVGD 164 (393)
T ss_dssp EEEEEEETTSCEEEEEEETTEEE----------------EEEEECTTTSCSSCEEEEEEEEEECTTCSEEEE-EEEEEET
T ss_pred CEEEEEeCCCcEEEEECCCCccc----------------eeeeecccCCCCCceEEEEEccccccccCCCCC-EEEEEEC
Confidence 68999999999999998762110 0122334679999999999998 565 9999999
Q ss_pred CCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCee-----------------
Q 018322 251 NSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSAL----------------- 313 (358)
Q Consensus 251 dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~----------------- 313 (358)
|++|+|||+++.+.. ..+.+|...|.+++|+|++.++|++|+.||+|++||++++....
T Consensus 165 D~tv~~Wd~~~~~~~----~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~ 240 (393)
T 4gq1_A 165 DCTLIIWRLTDEGPI----LAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLN 240 (393)
T ss_dssp TSEEEEEEEETTEEE----EEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEE
T ss_pred CCeEEEEECCCCcee----eeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecc
Confidence 999999999774332 45667889999999999987689999999999999998753211
Q ss_pred -------EEEecCCCCeEEEEEe-CCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 314 -------TSFKAHNADVNVISWN-RLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 314 -------~~~~~h~~~V~~i~~~-p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
....+|...|.++.|. +++ ..|++++.|+++++||++..+
T Consensus 241 ~~~~~~~~~~~~~~~~v~~v~~~~~dg-~~l~s~s~d~~i~vwd~~~~~ 288 (393)
T 4gq1_A 241 TLPLVNTCHSSGIASSLANVRWIGSDG-SGILAMCKSGAWLRWNLFANN 288 (393)
T ss_dssp SGGGC------CCSSSCSEEEEETTTT-CEEEEECTTSEEEEEEC----
T ss_pred cccceeeeecccccccceeeeeecCCC-CEEEEEeCCCCEEEEECccCC
Confidence 1124577889999997 677 899999999999999998654
No 109
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.89 E-value=1.1e-21 Score=209.81 Aligned_cols=170 Identities=19% Similarity=0.360 Sum_probs=144.0
Q ss_pred EEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEE
Q 018322 157 LQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAID 236 (358)
Q Consensus 157 ~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 236 (358)
....+.+|.+.|++++|+|++ .++|+++.||+|+|||+.. .+.+..+.+|...|.+++
T Consensus 649 ~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~d~~v~vwd~~~---------------------~~~~~~~~~~~~~v~~~~ 706 (1249)
T 3sfz_A 649 KLLDIKAHEDEVLCCAFSSDD-SYIATCSADKKVKIWDSAT---------------------GKLVHTYDEHSEQVNCCH 706 (1249)
T ss_dssp EEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTT---------------------CCEEEEEECCSSCEEEEE
T ss_pred EEEEeccCCCCEEEEEEecCC-CEEEEEeCCCeEEEEECCC---------------------CceEEEEcCCCCcEEEEE
Confidence 335566899999999999999 7999999999999999987 577888999999999999
Q ss_pred eCCCCCC-eEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCC----
Q 018322 237 WNPITTG-RLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKS---- 311 (358)
Q Consensus 237 ~s~~~~~-~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~---- 311 (358)
|+|.+.+ ++++|+.||.|++||+.++. .. ..+.+|...|.+++|+|++. +|++|+.||.|++||++++..
T Consensus 707 ~~~~~~~~~l~sg~~d~~v~vwd~~~~~-~~---~~~~~h~~~v~~~~~sp~~~-~l~s~s~dg~v~vwd~~~~~~~~~~ 781 (1249)
T 3sfz_A 707 FTNKSNHLLLATGSNDFFLKLWDLNQKE-CR---NTMFGHTNSVNHCRFSPDDE-LLASCSADGTLRLWDVRSANERKSI 781 (1249)
T ss_dssp ECSSSSCCEEEEEETTSCEEEEETTSSS-EE---EEECCCSSCEEEEEECSSTT-EEEEEESSSEEEEEEGGGTEEEEEE
T ss_pred EecCCCceEEEEEeCCCeEEEEECCCcc-hh---heecCCCCCEEEEEEecCCC-EEEEEECCCeEEEEeCCCCccccee
Confidence 9995332 88999999999999998743 22 56778999999999999998 999999999999999876321
Q ss_pred -------------------------------------------------eeEEE-ecCCCCeEEEEEeCCCCcEEEEEeC
Q 018322 312 -------------------------------------------------ALTSF-KAHNADVNVISWNRLASCLLASGSD 341 (358)
Q Consensus 312 -------------------------------------------------~~~~~-~~h~~~V~~i~~~p~~~~~lasgs~ 341 (358)
.+..+ ..|...|.+++|+|++ .++++|+.
T Consensus 782 ~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~~~~~ 860 (1249)
T 3sfz_A 782 NVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYD-HLAVIALS 860 (1249)
T ss_dssp ECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSST-TEEEEECS
T ss_pred cccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCC-CEEEEEeC
Confidence 00111 2678889999999999 89999999
Q ss_pred CCCEEEEeCCCCC
Q 018322 342 DGTFSIHDLRLLK 354 (358)
Q Consensus 342 Dg~i~iwDlr~~~ 354 (358)
||.|++||+.+..
T Consensus 861 dg~v~vwd~~~~~ 873 (1249)
T 3sfz_A 861 QYCVELWNIDSRL 873 (1249)
T ss_dssp SSCEEEEETTTTE
T ss_pred CCeEEEEEcCCCc
Confidence 9999999998653
No 110
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.89 E-value=2.6e-21 Score=191.17 Aligned_cols=205 Identities=15% Similarity=0.179 Sum_probs=165.7
Q ss_pred ceeEEEEe--ccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018322 69 CLSFDIVR--DTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDD 146 (358)
Q Consensus 69 ~ls~~~~~--d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (358)
..++.|.| ++ .+|++|+ .++.|.||++.+-....
T Consensus 67 v~~~~~sp~~~~-----------~~l~s~~-----~dg~v~vw~~~~~~~~~---------------------------- 102 (615)
T 1pgu_A 67 VTTVKFSPIKGS-----------QYLCSGD-----ESGKVIVWGWTFDKESN---------------------------- 102 (615)
T ss_dssp EEEEEECSSTTC-----------CEEEEEE-----TTSEEEEEEEEEEGGGT----------------------------
T ss_pred EEEEEECcCCCC-----------CEEEEec-----CCCEEEEEeCCCCcccc----------------------------
Confidence 66778877 64 4788887 35689999984210000
Q ss_pred ccCCCCCCCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCC----CcEEEEeCCCCccccccccccccCCCCCCCCCCCc
Q 018322 147 DEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADT----GHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPL 222 (358)
Q Consensus 147 ~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~d----g~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (358)
. ....+...+..|.+.|+++.|+|++ .+|++++.+ +.|++||. ..++
T Consensus 103 -~----~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~~~~~~~~v~~~d~-----------------------~~~~ 153 (615)
T 1pgu_A 103 -S----VEVNVKSEFQVLAGPISDISWDFEG-RRLCVVGEGRDNFGVFISWDS-----------------------GNSL 153 (615)
T ss_dssp -E----EEEEEEEEEECCSSCEEEEEECTTS-SEEEEEECCSSCSEEEEETTT-----------------------CCEE
T ss_pred -c----ccccccchhhcccccEEEEEEeCCC-CEEEEeccCCCCccEEEEEEC-----------------------CCcc
Confidence 0 0223445667899999999999999 688888887 78999983 2456
Q ss_pred EEEcCCCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCC---cEEEEEECCC-CCCEEEEEECC
Q 018322 223 VKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSA---SVEDLQWSPT-EPDVFASCSVD 298 (358)
Q Consensus 223 ~~~~~h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~---~V~~v~~sp~-~~~~las~s~D 298 (358)
..+.+|...|++++|+|++..+|++|+.|+.|++||+.+. .. ...+.+|.. .|.+++|+|+ +. +|++++.|
T Consensus 154 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~-~~---~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~d 228 (615)
T 1pgu_A 154 GEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPF-KF---SASDRTHHKQGSFVRDVEFSPDSGE-FVITVGSD 228 (615)
T ss_dssp EECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTB-EE---EEEECSSSCTTCCEEEEEECSTTCC-EEEEEETT
T ss_pred eeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCc-ce---eeeecccCCCCceEEEEEECCCCCC-EEEEEeCC
Confidence 7788999999999999998768999999999999998763 22 245677888 9999999999 77 99999999
Q ss_pred CcEEEEECCCCCCeeEEE-e---cCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 299 GHIAIWDTRVGKSALTSF-K---AHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 299 g~I~iwD~r~~~~~~~~~-~---~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
|.|++||++++ ..+..+ . .|...|++++|+ ++ .+|++++.||.|++||+++.+
T Consensus 229 g~i~vwd~~~~-~~~~~~~~~~~~~~~~v~~~~~~-~~-~~l~~~~~d~~i~~wd~~~~~ 285 (615)
T 1pgu_A 229 RKISCFDGKSG-EFLKYIEDDQEPVQGGIFALSWL-DS-QKFATVGADATIRVWDVTTSK 285 (615)
T ss_dssp CCEEEEETTTC-CEEEECCBTTBCCCSCEEEEEES-SS-SEEEEEETTSEEEEEETTTTE
T ss_pred CeEEEEECCCC-CEeEEecccccccCCceEEEEEc-CC-CEEEEEcCCCcEEEEECCCCc
Confidence 99999999985 466677 5 899999999999 77 899999999999999998764
No 111
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.88 E-value=2.8e-21 Score=182.13 Aligned_cols=231 Identities=11% Similarity=0.032 Sum_probs=144.5
Q ss_pred cCcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018322 66 GWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSD 145 (358)
Q Consensus 66 ~wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (358)
.-+..+++|.|....... ....+|+.|. .++.|.||++.
T Consensus 136 ~~~v~~v~~~p~~~~~~~---~d~~~las~s-----~D~tv~~Wd~~--------------------------------- 174 (393)
T 4gq1_A 136 HNFVNDIDIADVYSADNR---LAEQVIASVG-----DDCTLIIWRLT--------------------------------- 174 (393)
T ss_dssp SSCEEEEEEEEEECTTCS---EEEEEEEEEE-----TTSEEEEEEEE---------------------------------
T ss_pred CCceEEEEEccccccccC---CCCCEEEEEE-----CCCeEEEEECC---------------------------------
Confidence 345678888874211100 1135777776 56799999984
Q ss_pred CccCCCCCCCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCC----CCCCCCC
Q 018322 146 DDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAP----QVSNQSP 221 (358)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 221 (358)
..........|...|.+++|+|.++.+|++++.||+|+|||+................... .......
T Consensus 175 --------~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 246 (393)
T 4gq1_A 175 --------DEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVN 246 (393)
T ss_dssp --------TTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC-
T ss_pred --------CCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEeccccccee
Confidence 2223356678999999999999987799999999999999998743221111100000000 0000112
Q ss_pred cEEEcCCCCCeEEEEeC-CCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEE------------------E
Q 018322 222 LVKFGGHKDEGYAIDWN-PITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVED------------------L 282 (358)
Q Consensus 222 ~~~~~~h~~~v~~l~~s-~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~------------------v 282 (358)
.....+|...+.++.|+ +++. +|++++.|++|++||+..... . ..+..|...+.. .
T Consensus 247 ~~~~~~~~~~v~~v~~~~~dg~-~l~s~s~d~~i~vwd~~~~~~-~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (393)
T 4gq1_A 247 TCHSSGIASSLANVRWIGSDGS-GILAMCKSGAWLRWNLFANND-Y---NEISDSTMKLGPKNLLPNVQGISLFPSLLGA 321 (393)
T ss_dssp -----CCSSSCSEEEEETTTTC-EEEEECTTSEEEEEEC-----------------------CCSCSEEEECSSCCSSCC
T ss_pred eeecccccccceeeeeecCCCC-EEEEEeCCCCEEEEECccCCC-C---ceEeeecCccccEEEccccccccccCcceeE
Confidence 22346788899999987 6777 999999999999999976322 1 222333333222 2
Q ss_pred EECC-CCCCEEEEEECCCcEEEEECCCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCC
Q 018322 283 QWSP-TEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLL 353 (358)
Q Consensus 283 ~~sp-~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~ 353 (358)
.|+| .+..++++|+.||.|+|||+.++ .+......|...|++++|+|+| ++||+++.+| +.+|.+..+
T Consensus 322 ~~~~~~~~~~~~sgs~Dg~V~lwd~~~~-~~~~~~~~~~~~V~svafspdG-~~LA~as~~G-v~lvrL~gf 390 (393)
T 4gq1_A 322 CPHPRYMDYFATAHSQHGLIQLINTYEK-DSNSIPIQLGMPIVDFCWHQDG-SHLAIATEGS-VLLTRLMGF 390 (393)
T ss_dssp EECSSCTTEEEEEETTTTEEEEEETTCT-TCCEEEEECSSCEEEEEECTTS-SEEEEEESSE-EEEEEEGGG
T ss_pred EEccCCCCEEEEEECCCCEEEEEECCCC-cEEEEecCCCCcEEEEEEcCCC-CEEEEEeCCC-eEEEEEeCc
Confidence 3333 33436677888999999999985 4666677888999999999999 9999998766 666665433
No 112
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.88 E-value=5.5e-21 Score=182.21 Aligned_cols=163 Identities=21% Similarity=0.359 Sum_probs=136.7
Q ss_pred EEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEE
Q 018322 157 LQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAID 236 (358)
Q Consensus 157 ~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 236 (358)
....+.+|.+.|.++.|++ .++++|+.||.|++||+.... .......+.+|...|.+++
T Consensus 205 ~~~~~~~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~~------------------~~~~~~~~~~~~~~v~~~~ 263 (435)
T 1p22_A 205 MLNTLIHHCEAVLHLRFNN---GMMVTCSKDRSIAVWDMASPT------------------DITLRRVLVGHRAAVNVVD 263 (435)
T ss_dssp EEEEECCCCSCEEEEECCT---TEEEEEETTSCEEEEECSSSS------------------CCEEEEEECCCSSCEEEEE
T ss_pred EEEEEcCCCCcEEEEEEcC---CEEEEeeCCCcEEEEeCCCCC------------------CceeeeEecCCCCcEEEEE
Confidence 3456678999999999974 589999999999999998621 0122256789999999999
Q ss_pred eCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEE
Q 018322 237 WNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSF 316 (358)
Q Consensus 237 ~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~ 316 (358)
| ++. +|++|+.||.|++||+++.. .. ..+.+|...|.+++|+ +. ++++|+.||.|++||++++ .++..+
T Consensus 264 ~--~~~-~l~s~~~dg~i~vwd~~~~~-~~---~~~~~~~~~v~~~~~~--~~-~l~~g~~dg~i~iwd~~~~-~~~~~~ 332 (435)
T 1p22_A 264 F--DDK-YIVSASGDRTIKVWNTSTCE-FV---RTLNGHKRGIACLQYR--DR-LVVSGSSDNTIRLWDIECG-ACLRVL 332 (435)
T ss_dssp E--ETT-EEEEEETTSEEEEEETTTCC-EE---EEEECCSSCEEEEEEE--TT-EEEEEETTSCEEEEETTTC-CEEEEE
T ss_pred e--CCC-EEEEEeCCCeEEEEECCcCc-EE---EEEcCCCCcEEEEEeC--CC-EEEEEeCCCeEEEEECCCC-CEEEEE
Confidence 9 455 99999999999999998743 22 5677899999999995 44 9999999999999999985 578888
Q ss_pred ecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 317 KAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 317 ~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
.+|...|++++| ++ .+|++|+.||.|++||+++.+
T Consensus 333 ~~h~~~v~~~~~--~~-~~l~sg~~dg~i~vwd~~~~~ 367 (435)
T 1p22_A 333 EGHEELVRCIRF--DN-KRIVSGAYDGKIKVWDLVAAL 367 (435)
T ss_dssp CCCSSCEEEEEC--CS-SEEEEEETTSCEEEEEHHHHT
T ss_pred eCCcCcEEEEEe--cC-CEEEEEeCCCcEEEEECCCCC
Confidence 999999999999 45 799999999999999987554
No 113
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.88 E-value=6.5e-21 Score=172.09 Aligned_cols=167 Identities=19% Similarity=0.145 Sum_probs=142.1
Q ss_pred CCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeE
Q 018322 154 TPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGY 233 (358)
Q Consensus 154 ~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 233 (358)
...+...+.+|.+.|+++.| |++ .+|++++.||.|++||+.. ......+..|...+.
T Consensus 7 ~~~~~~~l~~h~~~v~~~~~-~~~-~~l~s~~~dg~v~vw~~~~---------------------~~~~~~~~~~~~~v~ 63 (313)
T 3odt_A 7 GYQLSATLKGHDQDVRDVVA-VDD-SKVASVSRDGTVRLWSKDD---------------------QWLGTVVYTGQGFLN 63 (313)
T ss_dssp CCEEEEEECCCSSCEEEEEE-EET-TEEEEEETTSEEEEEEESS---------------------SEEEEEEEECSSCEE
T ss_pred cHHHHHHhhCCCCCcEEEEe-cCC-CEEEEEEcCCcEEEEECCC---------------------CEEEEEeecCCccEE
Confidence 44566788899999999999 777 6899999999999999966 455667788999999
Q ss_pred EEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCee
Q 018322 234 AIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSAL 313 (358)
Q Consensus 234 ~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~ 313 (358)
+++|+|++. +|++|+.||.|++|++..... ......+.+|...|.+++| ++. +|++++.||.|++|| . ...+
T Consensus 64 ~~~~~~~~~-~l~~~~~dg~i~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~--~~~-~l~~~~~d~~i~~~d--~-~~~~ 135 (313)
T 3odt_A 64 SVCYDSEKE-LLLFGGKDTMINGVPLFATSG-EDPLYTLIGHQGNVCSLSF--QDG-VVISGSWDKTAKVWK--E-GSLV 135 (313)
T ss_dssp EEEEETTTT-EEEEEETTSCEEEEETTCCTT-SCC-CEECCCSSCEEEEEE--ETT-EEEEEETTSEEEEEE--T-TEEE
T ss_pred EEEECCCCC-EEEEecCCCeEEEEEeeecCC-CCcccchhhcccCEEEEEe--cCC-EEEEEeCCCCEEEEc--C-CcEE
Confidence 999999998 999999999999999976432 1223567789999999999 344 899999999999999 2 3577
Q ss_pred EEEecCCCCeEEEEEeC-CCCcEEEEEeCCCCEEEEeCCC
Q 018322 314 TSFKAHNADVNVISWNR-LASCLLASGSDDGTFSIHDLRL 352 (358)
Q Consensus 314 ~~~~~h~~~V~~i~~~p-~~~~~lasgs~Dg~i~iwDlr~ 352 (358)
..+..|...|.+++|.| ++ .+|++++.||.|++||.+.
T Consensus 136 ~~~~~~~~~v~~~~~~~~~~-~~l~~~~~d~~i~i~d~~~ 174 (313)
T 3odt_A 136 YNLQAHNASVWDAKVVSFSE-NKFLTASADKTIKLWQNDK 174 (313)
T ss_dssp EEEECCSSCEEEEEEEETTT-TEEEEEETTSCEEEEETTE
T ss_pred EecccCCCceeEEEEccCCC-CEEEEEECCCCEEEEecCc
Confidence 78889999999999998 55 8999999999999999553
No 114
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.87 E-value=1.2e-20 Score=180.22 Aligned_cols=160 Identities=19% Similarity=0.322 Sum_probs=136.7
Q ss_pred EEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEE
Q 018322 157 LQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAID 236 (358)
Q Consensus 157 ~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 236 (358)
....+.+|.+.|+++.|++ .++++|+.||+|++||+.. ...+..+.+|...|.+++
T Consensus 151 ~~~~~~~h~~~v~~~~~~~---~~l~s~~~dg~i~vwd~~~---------------------~~~~~~~~~h~~~v~~~~ 206 (445)
T 2ovr_B 151 CLRTLVGHTGGVWSSQMRD---NIIISGSTDRTLKVWNAET---------------------GECIHTLYGHTSTVRCMH 206 (445)
T ss_dssp EEEECCCCSSCEEEEEEET---TEEEEEETTSCEEEEETTT---------------------TEEEEEECCCSSCEEEEE
T ss_pred EEEEEcCCCCCEEEEEecC---CEEEEEeCCCeEEEEECCc---------------------CcEEEEECCCCCcEEEEE
Confidence 3456678999999999983 5899999999999999987 466778889999999999
Q ss_pred eCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEE
Q 018322 237 WNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSF 316 (358)
Q Consensus 237 ~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~ 316 (358)
|++ . +|++|+.||.|++||+.++. .. ..+.+|...|.+++| ++. .+++|+.||.|++||++++ .++..+
T Consensus 207 ~~~--~-~l~s~s~dg~i~~wd~~~~~-~~---~~~~~~~~~v~~~~~--~~~-~l~~~~~dg~i~iwd~~~~-~~~~~~ 275 (445)
T 2ovr_B 207 LHE--K-RVVSGSRDATLRVWDIETGQ-CL---HVLMGHVAAVRCVQY--DGR-RVVSGAYDFMVKVWDPETE-TCLHTL 275 (445)
T ss_dssp EET--T-EEEEEETTSEEEEEESSSCC-EE---EEEECCSSCEEEEEE--CSS-CEEEEETTSCEEEEEGGGT-EEEEEE
T ss_pred ecC--C-EEEEEeCCCEEEEEECCCCc-EE---EEEcCCcccEEEEEE--CCC-EEEEEcCCCEEEEEECCCC-cEeEEe
Confidence 963 3 89999999999999998743 22 467789999999999 455 8999999999999999984 577788
Q ss_pred ecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 317 KAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 317 ~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
..|...|.+++| ++ .+|++|+.||.|++||+++++
T Consensus 276 ~~~~~~v~~~~~--~~-~~l~~~~~d~~i~i~d~~~~~ 310 (445)
T 2ovr_B 276 QGHTNRVYSLQF--DG-IHVVSGSLDTSIRVWDVETGN 310 (445)
T ss_dssp CCCSSCEEEEEE--CS-SEEEEEETTSCEEEEETTTCC
T ss_pred cCCCCceEEEEE--CC-CEEEEEeCCCeEEEEECCCCC
Confidence 899999999999 55 789999999999999998765
No 115
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.87 E-value=5.4e-21 Score=198.40 Aligned_cols=164 Identities=10% Similarity=0.035 Sum_probs=136.2
Q ss_pred EEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEe
Q 018322 158 QLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDW 237 (358)
Q Consensus 158 ~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 237 (358)
.....+|.+.|++++|+|++ .+||+|+.||+|+||+... ..... ...|...|++|+|
T Consensus 10 ~~~~~gh~~~V~~lafspdg-~~lAsgs~Dg~I~lw~~~~---------------------~~~~~-~~~~~~~V~~l~f 66 (902)
T 2oaj_A 10 ETNKYGMSSKPIAAAFDFTQ-NLLAIATVTGEVHIYGQQQ---------------------VEVVI-KLEDRSAIKEMRF 66 (902)
T ss_dssp EEEEEECSSCEEEEEEETTT-TEEEEEETTSEEEEECSTT---------------------CEEEE-ECSSCCCEEEEEE
T ss_pred cccccCCCCCcEEEEECCCC-CEEEEEeCCCEEEEEeCCC---------------------cEEEE-EcCCCCCEEEEEE
Confidence 35667999999999999999 7999999999999999765 22222 2357789999999
Q ss_pred CCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCee----
Q 018322 238 NPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSAL---- 313 (358)
Q Consensus 238 s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~---- 313 (358)
+| +. +|++++.|++|++||+.++ ... ..+. |...|++++|+|++. +|++|+.||.|++||++.+. +.
T Consensus 67 sp-g~-~L~S~s~D~~v~lWd~~~~-~~~---~~~~-~~~~V~~v~~sp~g~-~l~sgs~dg~V~lwd~~~~~-~~~~~i 137 (902)
T 2oaj_A 67 VK-GI-YLVVINAKDTVYVLSLYSQ-KVL---TTVF-VPGKITSIDTDASLD-WMLIGLQNGSMIVYDIDRDQ-LSSFKL 137 (902)
T ss_dssp ET-TT-EEEEEETTCEEEEEETTTC-SEE---EEEE-CSSCEEEEECCTTCS-EEEEEETTSCEEEEETTTTE-EEEEEE
T ss_pred cC-CC-EEEEEECcCeEEEEECCCC-cEE---EEEc-CCCCEEEEEECCCCC-EEEEEcCCCcEEEEECCCCc-ccccee
Confidence 99 76 8999999999999999874 322 2333 678999999999998 99999999999999998743 21
Q ss_pred -------EEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 314 -------TSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 314 -------~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
..+.+|...|++|+|+|++..+|++|+.||.| |||+++.+
T Consensus 138 ~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~ 184 (902)
T 2oaj_A 138 DNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENE 184 (902)
T ss_dssp CCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTE
T ss_pred ccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCc
Confidence 12356889999999999754789999999999 99998754
No 116
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.86 E-value=1.2e-19 Score=173.19 Aligned_cols=161 Identities=22% Similarity=0.374 Sum_probs=138.5
Q ss_pred eEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEE
Q 018322 156 ILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAI 235 (358)
Q Consensus 156 ~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 235 (358)
.....+.+|.+.|.++.+++ ..+++|+.||+|++||+.. .+++..+.+|...+.++
T Consensus 190 ~~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~i~~wd~~~---------------------~~~~~~~~~~~~~v~~~ 245 (445)
T 2ovr_B 190 ECIHTLYGHTSTVRCMHLHE---KRVVSGSRDATLRVWDIET---------------------GQCLHVLMGHVAAVRCV 245 (445)
T ss_dssp EEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEESSS---------------------CCEEEEEECCSSCEEEE
T ss_pred cEEEEECCCCCcEEEEEecC---CEEEEEeCCCEEEEEECCC---------------------CcEEEEEcCCcccEEEE
Confidence 34456678999999999964 5799999999999999987 56778889999999999
Q ss_pred EeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEE
Q 018322 236 DWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTS 315 (358)
Q Consensus 236 ~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~ 315 (358)
+| ++. +|++|+.||.|++||+++. .. ...+.+|...|.+++| ++. .+++|+.||.|++||++++ .++..
T Consensus 246 ~~--~~~-~l~~~~~dg~i~iwd~~~~-~~---~~~~~~~~~~v~~~~~--~~~-~l~~~~~d~~i~i~d~~~~-~~~~~ 314 (445)
T 2ovr_B 246 QY--DGR-RVVSGAYDFMVKVWDPETE-TC---LHTLQGHTNRVYSLQF--DGI-HVVSGSLDTSIRVWDVETG-NCIHT 314 (445)
T ss_dssp EE--CSS-CEEEEETTSCEEEEEGGGT-EE---EEEECCCSSCEEEEEE--CSS-EEEEEETTSCEEEEETTTC-CEEEE
T ss_pred EE--CCC-EEEEEcCCCEEEEEECCCC-cE---eEEecCCCCceEEEEE--CCC-EEEEEeCCCeEEEEECCCC-CEEEE
Confidence 99 455 8999999999999999773 22 2567789999999999 555 8999999999999999985 57788
Q ss_pred EecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 316 FKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 316 ~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
+..|...+.++.++ + .+|++|+.||.|++||+++++
T Consensus 315 ~~~~~~~v~~~~~~--~-~~l~~~~~dg~i~vwd~~~~~ 350 (445)
T 2ovr_B 315 LTGHQSLTSGMELK--D-NILVSGNADSTVKIWDIKTGQ 350 (445)
T ss_dssp ECCCCSCEEEEEEE--T-TEEEEEETTSCEEEEETTTCC
T ss_pred EcCCcccEEEEEEe--C-CEEEEEeCCCeEEEEECCCCc
Confidence 89999999998886 3 689999999999999998765
No 117
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.86 E-value=2.4e-21 Score=177.52 Aligned_cols=163 Identities=13% Similarity=0.120 Sum_probs=134.9
Q ss_pred ecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCC
Q 018322 162 VAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPIT 241 (358)
Q Consensus 162 ~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~ 241 (358)
.+|.+.|++++|+|++ .+|++++.||.|+||++..... ..+...+.+|...|++++|+|++
T Consensus 8 ~~h~~~v~~~~~s~~~-~~l~~~~~d~~v~iw~~~~~~~------------------~~~~~~~~~~~~~v~~~~~~~~~ 68 (342)
T 1yfq_A 8 QAPKDYISDIKIIPSK-SLLLITSWDGSLTVYKFDIQAK------------------NVDLLQSLRYKHPLLCCNFIDNT 68 (342)
T ss_dssp SCCSSCEEEEEEEGGG-TEEEEEETTSEEEEEEEETTTT------------------EEEEEEEEECSSCEEEEEEEESS
T ss_pred cCCCCcEEEEEEcCCC-CEEEEEcCCCeEEEEEeCCCCc------------------cccceeeeecCCceEEEEECCCC
Confidence 3799999999999988 7899999999999999976210 11244566899999999999986
Q ss_pred CCeEEEEeCCCcEEEEec-CCCCCcccCCCcccc--CCCcEEEEEECCCCCCEEEEEECCCcEEEEECCC---------C
Q 018322 242 TGRLVTGDCNSCIYLWEP-ASDATWNVDPNPFIG--HSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRV---------G 309 (358)
Q Consensus 242 ~~~l~sgs~dg~I~lwd~-~~~~~~~~~~~~~~~--h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~---------~ 309 (358)
..+|++|+.||.|++||+ ... .. ..+.+ |...|.+++|+| +. +|++++.|+.|++||++. .
T Consensus 69 ~~~l~~~~~dg~i~~wd~~~~~-~~----~~~~~~~~~~~v~~l~~~~-~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~ 141 (342)
T 1yfq_A 69 DLQIYVGTVQGEILKVDLIGSP-SF----QALTNNEANLGICRICKYG-DD-KLIAASWDGLIEVIDPRNYGDGVIAVKN 141 (342)
T ss_dssp SEEEEEEETTSCEEEECSSSSS-SE----EECBSCCCCSCEEEEEEET-TT-EEEEEETTSEEEEECHHHHTTBCEEEEE
T ss_pred CcEEEEEcCCCeEEEEEeccCC-ce----EeccccCCCCceEEEEeCC-CC-EEEEEcCCCeEEEEcccccccccccccC
Confidence 327999999999999999 663 22 45667 999999999999 66 999999999999999986 3
Q ss_pred CCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCC-CCC
Q 018322 310 KSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRL-LKV 355 (358)
Q Consensus 310 ~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~-~~~ 355 (358)
.++..+. |...|.+++|+|++ |++|+.||.|++||+++ ...
T Consensus 142 -~~~~~~~-~~~~v~~~~~~~~~---l~~~~~d~~i~i~d~~~~~~~ 183 (342)
T 1yfq_A 142 -LNSNNTK-VKNKIFTMDTNSSR---LIVGMNNSQVQWFRLPLCEDD 183 (342)
T ss_dssp -SCSSSSS-SCCCEEEEEECSSE---EEEEESTTEEEEEESSCCTTC
T ss_pred -CeeeEEe-eCCceEEEEecCCc---EEEEeCCCeEEEEECCccccc
Confidence 2444444 88999999999866 89999999999999998 543
No 118
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.86 E-value=1.4e-20 Score=181.89 Aligned_cols=159 Identities=11% Similarity=0.069 Sum_probs=124.3
Q ss_pred ceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEE----cCCCCCeEEEEeCCCCC
Q 018322 167 CVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF----GGHKDEGYAIDWNPITT 242 (358)
Q Consensus 167 ~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~h~~~v~~l~~s~~~~ 242 (358)
.|.+++|+|++ .+||+|+.||+|+|||+......- . ....+.++ .+|...|++++|+|++
T Consensus 131 sv~svafSPDG-~~LAsgs~DGtVkIWd~~~~~l~~--~------------~~i~l~ti~~~~~gh~~~V~sVawSPdg- 194 (588)
T 2j04_A 131 TYHCFEWNPIE-SSIVVGNEDGELQFFSIRKNSENT--P------------EFYFESSIRLSDAGSKDWVTHIVWYEDV- 194 (588)
T ss_dssp CEEEEEECSSS-SCEEEEETTSEEEEEECCCCTTTC--C------------CCEEEEEEECSCTTCCCCEEEEEEETTE-
T ss_pred cEEEEEEcCCC-CEEEEEcCCCEEEEEECCCCcccc--c------------cceeeeeeecccccccccEEEEEEcCCc-
Confidence 59999999999 899999999999999998721000 0 00124555 6788899999999986
Q ss_pred CeEEEEeCCCcEEEEecCCCCCcccCCCcc-ccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEecCCC
Q 018322 243 GRLVTGDCNSCIYLWEPASDATWNVDPNPF-IGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNA 321 (358)
Q Consensus 243 ~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~-~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~ 321 (358)
|++++.|++|++|++..... ......+ .+|...|.+++|+ +. .+|+++ +++|++||+..+ .......+|.+
T Consensus 195 --Laass~D~tVrlWd~~~~~~-~~~~~tL~~~h~~~V~svaFs--g~-~LASa~-~~tIkLWd~~~~-~~~~~~~gh~~ 266 (588)
T 2j04_A 195 --LVAALSNNSVFSMTVSASSH-QPVSRMIQNASRRKITDLKIV--DY-KVVLTC-PGYVHKIDLKNY-SISSLKTGSLE 266 (588)
T ss_dssp --EEEEETTCCEEEECCCSSSS-CCCEEEEECCCSSCCCCEEEE--TT-EEEEEC-SSEEEEEETTTT-EEEEEECSCCS
T ss_pred --EEEEeCCCeEEEEECCCCcc-ccceeeecccccCcEEEEEEE--CC-EEEEEe-CCeEEEEECCCC-eEEEEEcCCCc
Confidence 88888899999999976431 1001234 3788999999999 45 888887 699999999874 23222337999
Q ss_pred CeEEEEE--eCCCCcEEEEEeCCCCEEEEeCC
Q 018322 322 DVNVISW--NRLASCLLASGSDDGTFSIHDLR 351 (358)
Q Consensus 322 ~V~~i~~--~p~~~~~lasgs~Dg~i~iwDlr 351 (358)
.|+.++| +|++ ..|++++.||+ ++|.+.
T Consensus 267 ~V~~va~~~s~d~-~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 267 NFHIIPLNHEKES-TILLMSNKTSY-KVLLED 296 (588)
T ss_dssp CCCEEEETTCSSC-EEEEECSSCEE-EEEESS
T ss_pred eEEEEEeeeCCCC-CEEEEEcCCCC-EEEeec
Confidence 9999999 9999 89999999999 999875
No 119
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.86 E-value=3.6e-20 Score=172.17 Aligned_cols=125 Identities=14% Similarity=0.178 Sum_probs=102.3
Q ss_pred cEEEcCCCCCeEEEEeCCCCCCeEEEEeCCCc-EEEEecCCCCCcccCCCccc-c-CCCcEEEEEECCCCCCEEEEEECC
Q 018322 222 LVKFGGHKDEGYAIDWNPITTGRLVTGDCNSC-IYLWEPASDATWNVDPNPFI-G-HSASVEDLQWSPTEPDVFASCSVD 298 (358)
Q Consensus 222 ~~~~~~h~~~v~~l~~s~~~~~~l~sgs~dg~-I~lwd~~~~~~~~~~~~~~~-~-h~~~V~~v~~sp~~~~~las~s~D 298 (358)
+..+.+|...|++++|+|++. +|++|+.||+ |++||++++.. . ..+. + |...|.+++|+|++. +|++|+.|
T Consensus 188 ~~~~~~h~~~v~~~~~s~~g~-~l~s~s~d~~~v~iwd~~~~~~-~---~~~~~g~h~~~v~~~~~s~~~~-~l~s~s~d 261 (355)
T 3vu4_A 188 GVLIKAHTNPIKMVRLNRKSD-MVATCSQDGTIIRVFKTEDGVL-V---REFRRGLDRADVVDMKWSTDGS-KLAVVSDK 261 (355)
T ss_dssp CEEECCCSSCEEEEEECTTSS-EEEEEETTCSEEEEEETTTCCE-E---EEEECTTCCSCEEEEEECTTSC-EEEEEETT
T ss_pred cEEEEccCCceEEEEECCCCC-EEEEEeCCCCEEEEEECCCCcE-E---EEEEcCCCCCcEEEEEECCCCC-EEEEEECC
Confidence 778999999999999999998 9999999998 99999987433 2 4565 5 999999999999998 99999999
Q ss_pred CcEEEEECCCCCC-eeEE------------------E---ecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCC
Q 018322 299 GHIAIWDTRVGKS-ALTS------------------F---KAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLL 353 (358)
Q Consensus 299 g~I~iwD~r~~~~-~~~~------------------~---~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~ 353 (358)
++|+|||++.+.. .... + ..+......++|++++ .+|++++.||.+++|+++..
T Consensus 262 ~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~-~~l~~~~~dg~~~~~~~~~~ 337 (355)
T 3vu4_A 262 WTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISES-SLVVVWPHTRMIETFKVVFD 337 (355)
T ss_dssp CEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSS-EEEEEETTTTEEEEEEEEEE
T ss_pred CEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCC-CEEEEEeCCCeEEEEEEEcC
Confidence 9999999986421 1111 1 1112234779999999 89999999999999998654
No 120
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.86 E-value=1e-20 Score=182.72 Aligned_cols=159 Identities=12% Similarity=0.170 Sum_probs=127.8
Q ss_pred cCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCC-----CeEEEEe
Q 018322 163 AHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKD-----EGYAIDW 237 (358)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-----~v~~l~~ 237 (358)
+|...|.+++|+|+| .+||+++.||.|+|||... .+..+. |.. .+.+++|
T Consensus 83 ~~~~~V~~vawSPdG-~~LAs~s~dg~V~iwd~~~-----------------------~l~~l~-~~~~~~~~sv~svaf 137 (588)
T 2j04_A 83 QPVCYPRVCKPSPID-DWMAVLSNNGNVSVFKDNK-----------------------MLTNLD-SKGNLSSRTYHCFEW 137 (588)
T ss_dssp SCSCCEEEEEECSSS-SCEEEEETTSCEEEEETTE-----------------------EEEECC-CSSCSTTTCEEEEEE
T ss_pred CCCCcEEEEEECCCC-CEEEEEeCCCcEEEEeCCc-----------------------eeeecc-CCCccccccEEEEEE
Confidence 568899999999999 7999999999999999533 233444 544 5999999
Q ss_pred CCCCCCeEEEEeCCCcEEEEecCCCCCcc---cCCCcc----ccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCC
Q 018322 238 NPITTGRLVTGDCNSCIYLWEPASDATWN---VDPNPF----IGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGK 310 (358)
Q Consensus 238 s~~~~~~l~sgs~dg~I~lwd~~~~~~~~---~~~~~~----~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~ 310 (358)
||++. +||+|+.||+|+|||+..+.... .....+ .+|...|.+++|+|++ +++++.|++|++||+....
T Consensus 138 SPDG~-~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~~ 213 (588)
T 2j04_A 138 NPIES-SIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSASS 213 (588)
T ss_dssp CSSSS-CEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSSS
T ss_pred cCCCC-EEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCCc
Confidence 99998 99999999999999997742100 001233 6788999999999988 8889999999999998744
Q ss_pred C--eeEEE-ecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 311 S--ALTSF-KAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 311 ~--~~~~~-~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
. ...++ .+|...|.+++|+ + ..||+++ +++|++||+.+.+
T Consensus 214 ~~~~~~tL~~~h~~~V~svaFs--g-~~LASa~-~~tIkLWd~~~~~ 256 (588)
T 2j04_A 214 HQPVSRMIQNASRRKITDLKIV--D-YKVVLTC-PGYVHKIDLKNYS 256 (588)
T ss_dssp SCCCEEEEECCCSSCCCCEEEE--T-TEEEEEC-SSEEEEEETTTTE
T ss_pred cccceeeecccccCcEEEEEEE--C-CEEEEEe-CCeEEEEECCCCe
Confidence 2 23455 4788899999999 5 7889887 6999999998654
No 121
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.86 E-value=5.3e-20 Score=166.65 Aligned_cols=155 Identities=22% Similarity=0.318 Sum_probs=132.7
Q ss_pred eeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEE--cCCCCCeEEEEeCCCCCCeE
Q 018322 168 VNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF--GGHKDEGYAIDWNPITTGRL 245 (358)
Q Consensus 168 V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~l~~s~~~~~~l 245 (358)
+++|.|++++ +||+|. |++|+|||+.+ .+.+..+ .+|...|++++|+|++. +|
T Consensus 28 ~~~l~WS~~~--~lAvg~-D~tV~iWd~~t---------------------g~~~~~~~~~~~~~~V~~v~~~~~~~-~l 82 (318)
T 4ggc_A 28 LNLVDWSSGN--VLAVAL-DNSVYLWSASS---------------------GDILQLLQMEQPGEYISSVAWIKEGN-YL 82 (318)
T ss_dssp CBCEEECTTS--EEEEEE-TTEEEEEETTT---------------------CCEEEEEECCSTTCCEEEEEECTTSS-EE
T ss_pred ceEEEECCCC--EEEEEe-CCEEEEEECCC---------------------CCEEEEEEecCCCCeEEEEEECCCCC-EE
Confidence 5889999876 788865 89999999987 4444444 56778999999999998 99
Q ss_pred EEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEecCCCCeEE
Q 018322 246 VTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNV 325 (358)
Q Consensus 246 ~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~ 325 (358)
++|+.||+|++|++.++ ... ..+.+|...+.++.+. +. ++++++.++.+++|+.......+..+.+|...+..
T Consensus 83 ~sgs~Dg~v~iw~~~~~-~~~---~~~~~h~~~~~~~~~~--~~-~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (318)
T 4ggc_A 83 AVGTSSAEVQLWDVQQQ-KRL---RNMTSHSARVGSLSWN--SY-ILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCG 155 (318)
T ss_dssp EEEETTSEEEEEETTTT-EEE---EEEECCSSCEEEEEEE--TT-EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEE
T ss_pred EEEECCCcEEEeecCCc-eeE---EEecCccceEEEeecC--CC-EEEEEecCCceEeeecCCCceeEEEEcCccCceEE
Confidence 99999999999999874 322 5678899988877665 44 89999999999999999876777888999999999
Q ss_pred EEEeCCCCcEEEEEeCCCCEEEEeCCCCCC
Q 018322 326 ISWNRLASCLLASGSDDGTFSIHDLRLLKV 355 (358)
Q Consensus 326 i~~~p~~~~~lasgs~Dg~i~iwDlr~~~~ 355 (358)
+.|++.+ .+|++++.||.|+|||+++.+.
T Consensus 156 ~~~~~~~-~~l~s~~~d~~i~iwd~~~~~~ 184 (318)
T 4ggc_A 156 LRWAPDG-RHLASGGNDNLVNVWPSAPGEG 184 (318)
T ss_dssp EEECTTS-SEEEEEETTSCEEEEESSCBTT
T ss_pred EEEcCCC-CEEEEEecCcceeEEECCCCcc
Confidence 9999999 8999999999999999987653
No 122
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.83 E-value=5.3e-20 Score=175.86 Aligned_cols=172 Identities=13% Similarity=0.157 Sum_probs=129.3
Q ss_pred EecCCCceeEEEEcCCCCcEEE----EEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCC---cEEEcCCCCCeE
Q 018322 161 KVAHQGCVNRIRAMTQNPHICA----SWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSP---LVKFGGHKDEGY 233 (358)
Q Consensus 161 ~~~H~~~V~~i~~~p~~~~~la----t~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~h~~~v~ 233 (358)
.+.|.+.|++++|+|++ .+|| +|+.|++|+|||+........ ...++ ...+.+|...|.
T Consensus 88 ~~~~~~~v~~l~~spdg-~~lav~~~sgs~d~~v~iwd~~~~~~~~~-------------~~~~~~~~~~~~~~h~~~V~ 153 (434)
T 2oit_A 88 LVPMKFPIHHLALSCDN-LTLSACMMSSEYGSIIAFFDVRTFSNEAK-------------QQKRPFAYHKLLKDAGGMVI 153 (434)
T ss_dssp EECCSSCEEEEEECTTS-CEEEEEEEETTTEEEEEEEEHHHHHCTTC-------------SSCCCSEEEECCCSGGGSEE
T ss_pred cccCCCcccEEEEcCCC-CEEEEEEeccCCCceEEEEEccccccCCc-------------CCcceeeeeeccCCCCCceE
Confidence 45688999999999999 5666 888999999999865210000 00122 344567999999
Q ss_pred EEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCee
Q 018322 234 AIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSAL 313 (358)
Q Consensus 234 ~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~ 313 (358)
+|+|+|....+|++|+.||+|++||+++. ... ....+|...|.+++|+|++. +|++|+.||.|++||++. ...
T Consensus 154 ~v~~~p~~~~~las~s~Dg~v~iwD~~~~-~~~---~~~~~~~~~v~~v~wspdg~-~lasgs~dg~v~iwd~~~--~~~ 226 (434)
T 2oit_A 154 DMKWNPTVPSMVAVCLADGSIAVLQVTET-VKV---CATLPSTVAVTSVCWSPKGK-QLAVGKQNGTVVQYLPTL--QEK 226 (434)
T ss_dssp EEEECSSCTTEEEEEETTSCEEEEEESSS-EEE---EEEECGGGCEEEEEECTTSS-CEEEEETTSCEEEECTTC--CEE
T ss_pred EEEECCCCCCEEEEEECCCeEEEEEcCCC-cce---eeccCCCCceeEEEEcCCCC-EEEEEcCCCcEEEEccCC--ccc
Confidence 99999984449999999999999999874 211 33456889999999999988 999999999999999983 334
Q ss_pred EEEecC-------CCCeEEEEEeCCCCcEEE-EEeCCCC------EEEEeCCCCC
Q 018322 314 TSFKAH-------NADVNVISWNRLASCLLA-SGSDDGT------FSIHDLRLLK 354 (358)
Q Consensus 314 ~~~~~h-------~~~V~~i~~~p~~~~~la-sgs~Dg~------i~iwDlr~~~ 354 (358)
..+..| ...|.+++|++++ .+++ .++.+|. +++|++++.+
T Consensus 227 ~~~~~~~~~~~~~~~~v~~v~w~~~~-~~l~~~~~~dg~~~~~~~v~i~~l~~~~ 280 (434)
T 2oit_A 227 KVIPCPPFYESDHPVRVLDVLWIGTY-VFAIVYAAADGTLETSPDVVMALLPKKE 280 (434)
T ss_dssp EEECCCTTCCTTSCEEEEEEEEEETT-EEEEEEEETTCCSSSCCEEEEEECCCTT
T ss_pred ccccCCcccCCCCceeEEEEEEecCc-eEEEEEccCCCccCCCCceEEEEeccCC
Confidence 444333 2379999999988 5553 3445543 8999999764
No 123
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.82 E-value=4.3e-20 Score=176.48 Aligned_cols=176 Identities=15% Similarity=0.167 Sum_probs=130.0
Q ss_pred CCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCe
Q 018322 165 QGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGR 244 (358)
Q Consensus 165 ~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~ 244 (358)
...++.+++++.+ .++++++.+| |+||+............. ........+... ..|...|++++|+|++. +
T Consensus 36 ~~~~n~lavs~~~-~~l~~~~~dg-v~v~~~~~~~~~~~~~~~-----~~~~~~~~~~~~-~~~~~~v~~l~~spdg~-~ 106 (434)
T 2oit_A 36 KERSSLLAVSNKY-GLVFAGGASG-LQIFPTKNLLIQNKPGDD-----PNKIVDKVQGLL-VPMKFPIHHLALSCDNL-T 106 (434)
T ss_dssp CSCCBCEEEETTT-TEEEEEETTE-EEEEEHHHHCCCCCTTCC-----TTCEEECCCCEE-ECCSSCEEEEEECTTSC-E
T ss_pred CCCccEEEEecCC-CEEEEECCCE-EEEEEchHhhhhcccccC-----cccccccCcccc-ccCCCcccEEEEcCCCC-E
Confidence 3468999999988 6888888888 999886432110000000 000000122222 24567899999999998 8
Q ss_pred EE----EEeCCCcEEEEecCCC-----C--CcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCee
Q 018322 245 LV----TGDCNSCIYLWEPASD-----A--TWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSAL 313 (358)
Q Consensus 245 l~----sgs~dg~I~lwd~~~~-----~--~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~ 313 (358)
|+ +|+.|+.|+|||+.+. . ........+.+|...|.+++|+|+...+|++|+.||+|++||++++ ..+
T Consensus 107 lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~-~~~ 185 (434)
T 2oit_A 107 LSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTET-VKV 185 (434)
T ss_dssp EEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSS-EEE
T ss_pred EEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCC-cce
Confidence 88 7889999999998653 0 1111124466799999999999985559999999999999999985 455
Q ss_pred EEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCC
Q 018322 314 TSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLR 351 (358)
Q Consensus 314 ~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr 351 (358)
.....|...|++++|+|++ .+|++|+.||+|++||++
T Consensus 186 ~~~~~~~~~v~~v~wspdg-~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 186 CATLPSTVAVTSVCWSPKG-KQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp EEEECGGGCEEEEEECTTS-SCEEEEETTSCEEEECTT
T ss_pred eeccCCCCceeEEEEcCCC-CEEEEEcCCCcEEEEccC
Confidence 5566788999999999999 999999999999999998
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.82 E-value=1.8e-18 Score=161.75 Aligned_cols=161 Identities=11% Similarity=0.102 Sum_probs=126.2
Q ss_pred CCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCC
Q 018322 164 HQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTG 243 (358)
Q Consensus 164 H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~ 243 (358)
+...+.+++|+|++..++++++.+++|++||+.. .+.+..+..+. .+.+++|+|++.
T Consensus 30 ~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~---------------------~~~~~~~~~~~-~v~~~~~spdg~- 86 (391)
T 1l0q_A 30 VGSNPMGAVISPDGTKVYVANAHSNDVSIIDTAT---------------------NNVIATVPAGS-SPQGVAVSPDGK- 86 (391)
T ss_dssp CSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTT---------------------TEEEEEEECSS-SEEEEEECTTSS-
T ss_pred cCCCcceEEECCCCCEEEEECCCCCeEEEEECCC---------------------CeEEEEEECCC-CccceEECCCCC-
Confidence 4456899999999966678888999999999976 35555565554 899999999998
Q ss_pred eE-EEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEecCCCC
Q 018322 244 RL-VTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNAD 322 (358)
Q Consensus 244 ~l-~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~ 322 (358)
+| ++++.++.|++||+.++.. . ..+. +...+.+++|+|++..++++++.++.|++||++++ ..+..+..| ..
T Consensus 87 ~l~~~~~~~~~v~v~d~~~~~~-~---~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~-~~~~~~~~~-~~ 159 (391)
T 1l0q_A 87 QVYVTNMASSTLSVIDTTSNTV-A---GTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTK-AVINTVSVG-RS 159 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEE-E---EEEE-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT-EEEEEEECC-SS
T ss_pred EEEEEECCCCEEEEEECCCCeE-E---EEEe-CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCC-cEEEEEecC-CC
Confidence 66 5566779999999977422 2 2233 44578999999999855588899999999999984 455555544 45
Q ss_pred eEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 323 VNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 323 V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
+.+++|+|++..++++++.++.|++||+++.+
T Consensus 160 ~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~ 191 (391)
T 1l0q_A 160 PKGIAVTPDGTKVYVANFDSMSISVIDTVTNS 191 (391)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred cceEEECCCCCEEEEEeCCCCEEEEEECCCCe
Confidence 79999999994455788899999999998764
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.81 E-value=5.4e-18 Score=158.45 Aligned_cols=161 Identities=14% Similarity=0.084 Sum_probs=125.2
Q ss_pred cCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCC
Q 018322 163 AHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITT 242 (358)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~ 242 (358)
.+...|++++|+|++..++++++.++.|++||+.. .+.+..+..| ..+.+++|+|++.
T Consensus 71 ~~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~---------------------~~~~~~~~~~-~~~~~~~~s~dg~ 128 (391)
T 1l0q_A 71 PAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTS---------------------NTVAGTVKTG-KSPLGLALSPDGK 128 (391)
T ss_dssp ECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTT---------------------TEEEEEEECS-SSEEEEEECTTSS
T ss_pred ECCCCccceEECCCCCEEEEEECCCCEEEEEECCC---------------------CeEEEEEeCC-CCcceEEECCCCC
Confidence 34459999999999966667777889999999987 3444555544 4789999999998
Q ss_pred CeE-EEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEecCCC
Q 018322 243 GRL-VTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNA 321 (358)
Q Consensus 243 ~~l-~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~ 321 (358)
+| ++++.++.|++||+.++ ... ..+..| ..+.+++|+|++..++++++.++.|++||++++ ..+..+ .+..
T Consensus 129 -~l~~~~~~~~~v~~~d~~~~-~~~---~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~-~~~~~~-~~~~ 200 (391)
T 1l0q_A 129 -KLYVTNNGDKTVSVINTVTK-AVI---NTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN-SVIDTV-KVEA 200 (391)
T ss_dssp -EEEEEETTTTEEEEEETTTT-EEE---EEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTT-EEEEEE-ECSS
T ss_pred -EEEEEeCCCCEEEEEECCCC-cEE---EEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCC-eEEEEE-ecCC
Confidence 55 78888999999999763 222 233333 567999999999856688889999999999984 344444 4566
Q ss_pred CeEEEEEeCCCCcEEEEEe---CCCCEEEEeCCCCC
Q 018322 322 DVNVISWNRLASCLLASGS---DDGTFSIHDLRLLK 354 (358)
Q Consensus 322 ~V~~i~~~p~~~~~lasgs---~Dg~i~iwDlr~~~ 354 (358)
.+.+++|+|++ .+|++++ .++.|++||+++.+
T Consensus 201 ~~~~~~~~~~g-~~l~~~~~~~~~~~v~~~d~~~~~ 235 (391)
T 1l0q_A 201 APSGIAVNPEG-TKAYVTNVDKYFNTVSMIDTGTNK 235 (391)
T ss_dssp EEEEEEECTTS-SEEEEEEECSSCCEEEEEETTTTE
T ss_pred CccceEECCCC-CEEEEEecCcCCCcEEEEECCCCe
Confidence 79999999999 6666666 68999999998764
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.80 E-value=2.1e-18 Score=163.46 Aligned_cols=162 Identities=13% Similarity=0.063 Sum_probs=131.3
Q ss_pred ecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCC
Q 018322 162 VAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPIT 241 (358)
Q Consensus 162 ~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~ 241 (358)
.+|.+.|+++.|+|++ .++++++.++.|++||+.. ...+..+..|...+.+++|+|++
T Consensus 166 ~~~~~~v~~~~~~~~~-~~~~s~~~d~~v~~~d~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~ 223 (433)
T 3bws_A 166 KKKLGFVETISIPEHN-ELWVSQMQANAVHVFDLKT---------------------LAYKATVDLTGKWSKILLYDPIR 223 (433)
T ss_dssp HTTCCEEEEEEEGGGT-EEEEEEGGGTEEEEEETTT---------------------CCEEEEEECSSSSEEEEEEETTT
T ss_pred cccCCceeEEEEcCCC-EEEEEECCCCEEEEEECCC---------------------ceEEEEEcCCCCCeeEEEEcCCC
Confidence 4789999999999988 7999999999999999976 46667778888999999999999
Q ss_pred CCeE-EEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEE--------CCCcEEEEECCCCCCe
Q 018322 242 TGRL-VTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCS--------VDGHIAIWDTRVGKSA 312 (358)
Q Consensus 242 ~~~l-~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s--------~Dg~I~iwD~r~~~~~ 312 (358)
. ++ ++++.++.|++||++++ ... ..+.. ...+.+++|+|++. .+++++ .||.|++||++++ ..
T Consensus 224 ~-~l~~~~~~~~~i~~~d~~~~-~~~---~~~~~-~~~~~~~~~~~~g~-~l~~~~~~~~~~~~~dg~i~~~d~~~~-~~ 295 (433)
T 3bws_A 224 D-LVYCSNWISEDISVIDRKTK-LEI---RKTDK-IGLPRGLLLSKDGK-ELYIAQFSASNQESGGGRLGIYSMDKE-KL 295 (433)
T ss_dssp T-EEEEEETTTTEEEEEETTTT-EEE---EECCC-CSEEEEEEECTTSS-EEEEEEEESCTTCSCCEEEEEEETTTT-EE
T ss_pred C-EEEEEecCCCcEEEEECCCC-cEE---EEecC-CCCceEEEEcCCCC-EEEEEECCCCccccCCCeEEEEECCCC-cE
Confidence 8 66 56668999999999763 322 22332 35699999999998 777776 5889999999974 33
Q ss_pred eEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 313 LTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 313 ~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
+. ...|...+.+++|+|++..++++++.++.|++||+++.+
T Consensus 296 ~~-~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~ 336 (433)
T 3bws_A 296 ID-TIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKK 336 (433)
T ss_dssp EE-EEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTE
T ss_pred Ee-eccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCc
Confidence 33 335566899999999996677888999999999998654
No 127
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.79 E-value=1.3e-17 Score=157.91 Aligned_cols=165 Identities=11% Similarity=0.004 Sum_probs=129.8
Q ss_pred EEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeC
Q 018322 159 LRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWN 238 (358)
Q Consensus 159 ~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 238 (358)
..+..|...++++.|+|++..++++++.++.|++||+.. ...+..+..+ ..+.+++|+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~---------------------~~~~~~~~~~-~~~~~~~~~ 262 (433)
T 3bws_A 205 ATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKT---------------------KLEIRKTDKI-GLPRGLLLS 262 (433)
T ss_dssp EEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTT---------------------TEEEEECCCC-SEEEEEEEC
T ss_pred EEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCC---------------------CcEEEEecCC-CCceEEEEc
Confidence 444578999999999999966667777899999999976 3444444443 468999999
Q ss_pred CCCCCeEEEEe--------CCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCC
Q 018322 239 PITTGRLVTGD--------CNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGK 310 (358)
Q Consensus 239 ~~~~~~l~sgs--------~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~ 310 (358)
|++. +|++++ .||.|++||+.++ ... ....|...+.+++|+|++..++++++.++.|++||++++
T Consensus 263 ~~g~-~l~~~~~~~~~~~~~dg~i~~~d~~~~-~~~----~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~- 335 (433)
T 3bws_A 263 KDGK-ELYIAQFSASNQESGGGRLGIYSMDKE-KLI----DTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEK- 335 (433)
T ss_dssp TTSS-EEEEEEEESCTTCSCCEEEEEEETTTT-EEE----EEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTT-
T ss_pred CCCC-EEEEEECCCCccccCCCeEEEEECCCC-cEE----eeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCC-
Confidence 9998 888887 5889999999763 221 223456688999999999867888899999999999974
Q ss_pred CeeEEEecCCCCeEEEEEeCCCCcEEEEEeC---------------CCCEEEEeCCCCC
Q 018322 311 SALTSFKAHNADVNVISWNRLASCLLASGSD---------------DGTFSIHDLRLLK 354 (358)
Q Consensus 311 ~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~---------------Dg~i~iwDlr~~~ 354 (358)
..+..+ .+...+.+++|+|++ .+|++++. ||.|++||+.+++
T Consensus 336 ~~~~~~-~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~ 392 (433)
T 3bws_A 336 KVQKSI-PVFDKPNTIALSPDG-KYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDT 392 (433)
T ss_dssp EEEEEE-ECSSSEEEEEECTTS-SEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTE
T ss_pred cEEEEe-cCCCCCCeEEEcCCC-CEEEEEecCCCccccccccccccceEEEEEECCCCc
Confidence 344444 477789999999999 77776665 5799999998754
No 128
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.79 E-value=1.8e-18 Score=157.57 Aligned_cols=160 Identities=12% Similarity=0.060 Sum_probs=112.6
Q ss_pred CCCceeEEEEcCC----CCcEEEEEeC--------------------CCcEEEEeCCCCccccccccccccCCCCCCCCC
Q 018322 164 HQGCVNRIRAMTQ----NPHICASWAD--------------------TGHVQVWDLRSHLNALAESETIVGQGAPQVSNQ 219 (358)
Q Consensus 164 H~~~V~~i~~~p~----~~~~lat~s~--------------------dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (358)
|.+.|+.+.++|+ + .++++++. |+.|++|++.. .+
T Consensus 110 ~~~~v~sla~spd~~~~~-~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~--------------------dG 168 (356)
T 2w18_A 110 EIREIRALFCSSDDESEK-QVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAE--------------------DG 168 (356)
T ss_dssp SEEEEEEECC------CC-EEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECT--------------------TS
T ss_pred cccceEEEEECCCccccc-cEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECC--------------------CC
Confidence 4467888888888 5 55665553 55566666543 24
Q ss_pred CCcEEEcCCCCCeEEEEeCC---CCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccC---CCcEEEEEECCCCCCEE-
Q 018322 220 SPLVKFGGHKDEGYAIDWNP---ITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGH---SASVEDLQWSPTEPDVF- 292 (358)
Q Consensus 220 ~~~~~~~~h~~~v~~l~~s~---~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h---~~~V~~v~~sp~~~~~l- 292 (358)
+.+..+.+|...++.++|++ ++. +|++|+.|++|+|||+.++ +.. +.+.+| ...+.+++|+|++. ++
T Consensus 169 ~~~~s~~~~~~~v~~l~fs~~~g~~~-~LaSgS~D~TIkIWDl~TG-k~l---~tL~g~~~~v~~v~~vafSpdG~-~lv 242 (356)
T 2w18_A 169 GGKENQFLMPPEETILTFAEVQGMQE-ALLGTTIMNNIVIWNLKTG-QLL---KKMHIDDSYQASVCHKAYSEMGL-LFI 242 (356)
T ss_dssp CEEEEEEECCCSSCEEEEEEEETSTT-EEEEEETTSEEEEEETTTC-CEE---EEEECCC---CCCEEEEEEETTE-EEE
T ss_pred ceeeeeccCCCceeeEEeeccCCCCc-eEEEecCCCcEEEEECCCC-cEE---EEEcCCCcceeeeEEEEECCCCC-EEE
Confidence 55667778999999999999 556 9999999999999999884 333 445544 34678889999987 44
Q ss_pred -----------EEEECCCcEEEEECCCCCCeeEEE-----ecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 293 -----------ASCSVDGHIAIWDTRVGKSALTSF-----KAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 293 -----------as~s~Dg~I~iwD~r~~~~~~~~~-----~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
++|+.|++|++||..++ ..+..+ .+|...+.+..++ + .++|+|+.||+|+|||+++++
T Consensus 243 s~s~~~~~w~laSGs~D~tIklWd~~tg-k~l~v~~~~~p~Gh~~~~lsg~~s--g-~~lASgS~DgTIkIWDl~tGk 316 (356)
T 2w18_A 243 VLSHPCAKESESLRSPVFQLIVINPKTT-LSVGVMLYCLPPGQAGRFLEGDVK--D-HCAAAILTSGTIAIWDLLLGQ 316 (356)
T ss_dssp EEC------------CCEEEEEEETTTT-EEEEEEEECCCTTCCCCEEEEEEE--T-TEEEEEETTSCEEEEETTTCS
T ss_pred EeccCCCcceeeccCCCcEEEEEECCCC-EEEEEEEeeccCCCcceeEccccC--C-CEEEEEcCCCcEEEEECCCCc
Confidence 67889999999999885 344333 3565555555554 5 799999999999999999875
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.76 E-value=2e-16 Score=150.07 Aligned_cols=161 Identities=14% Similarity=0.111 Sum_probs=122.8
Q ss_pred EEecCCCceeEEEEcCCCCcEEEEEeCCCc--EEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEe
Q 018322 160 RKVAHQGCVNRIRAMTQNPHICASWADTGH--VQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDW 237 (358)
Q Consensus 160 ~~~~H~~~V~~i~~~p~~~~~lat~s~dg~--V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 237 (358)
.+..|.+.+.+++|+|++..++++++.++. |++||+.. .. ...+..|...+.+++|
T Consensus 217 ~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~---------------------~~-~~~l~~~~~~~~~~~~ 274 (415)
T 2hqs_A 217 QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLAS---------------------GQ-IRQVTDGRSNNTEPTW 274 (415)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTT---------------------CC-EEECCCCSSCEEEEEE
T ss_pred EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCC---------------------CC-EEeCcCCCCcccceEE
Confidence 456788999999999999545557777665 89999876 22 3567778889999999
Q ss_pred CCCCCCeEEEEeC-CC--cEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECC---CcEEEEECCCCCC
Q 018322 238 NPITTGRLVTGDC-NS--CIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVD---GHIAIWDTRVGKS 311 (358)
Q Consensus 238 s~~~~~~l~sgs~-dg--~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~D---g~I~iwD~r~~~~ 311 (358)
+|++. +|++++. ++ .|++||+.++.. ..+..|...+.+++|+|++. .|++++.+ +.|++||+.++.
T Consensus 275 spdg~-~l~~~s~~~g~~~i~~~d~~~~~~-----~~l~~~~~~~~~~~~spdG~-~l~~~~~~~g~~~i~~~d~~~~~- 346 (415)
T 2hqs_A 275 FPDSQ-NLAFTSDQAGRPQVYKVNINGGAP-----QRITWEGSQNQDADVSSDGK-FMVMVSSNGGQQHIAKQDLATGG- 346 (415)
T ss_dssp CTTSS-EEEEEECTTSSCEEEEEETTSSCC-----EECCCSSSEEEEEEECTTSS-EEEEEEECSSCEEEEEEETTTCC-
T ss_pred CCCCC-EEEEEECCCCCcEEEEEECCCCCE-----EEEecCCCcccCeEECCCCC-EEEEEECcCCceEEEEEECCCCC-
Confidence 99998 8887775 45 677778866321 23445677899999999999 67666653 589999998753
Q ss_pred eeEEEecCCCCeEEEEEeCCCCcEEEEEeCCC---CEEEEeCCCC
Q 018322 312 ALTSFKAHNADVNVISWNRLASCLLASGSDDG---TFSIHDLRLL 353 (358)
Q Consensus 312 ~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg---~i~iwDlr~~ 353 (358)
...+..|. .+.+++|+|++ .+|++++.++ .|++||+...
T Consensus 347 -~~~l~~~~-~~~~~~~spdg-~~l~~~s~~~~~~~l~~~d~~g~ 388 (415)
T 2hqs_A 347 -VQVLSSTF-LDETPSLAPNG-TMVIYSSSQGMGSVLNLVSTDGR 388 (415)
T ss_dssp -EEECCCSS-SCEEEEECTTS-SEEEEEEEETTEEEEEEEETTSC
T ss_pred -EEEecCCC-CcCCeEEcCCC-CEEEEEEcCCCccEEEEEECCCC
Confidence 34555554 79999999999 7777777766 7999998754
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.75 E-value=2.9e-16 Score=149.00 Aligned_cols=162 Identities=10% Similarity=0.027 Sum_probs=126.6
Q ss_pred EEecCCCceeEEEEcCCCCcEEEEEeCCC---cEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEE
Q 018322 160 RKVAHQGCVNRIRAMTQNPHICASWADTG---HVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAID 236 (358)
Q Consensus 160 ~~~~H~~~V~~i~~~p~~~~~lat~s~dg---~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 236 (358)
.+..|.+.|.+++|+|++ ..||+++.++ .|++||+.. .+. ..+..|...+.+++
T Consensus 173 ~l~~~~~~v~~~~~Spdg-~~la~~s~~~~~~~i~~~d~~t---------------------g~~-~~l~~~~~~~~~~~ 229 (415)
T 2hqs_A 173 VVHRSPQPLMSPAWSPDG-SKLAYVTFESGRSALVIQTLAN---------------------GAV-RQVASFPRHNGAPA 229 (415)
T ss_dssp EEEEESSCEEEEEECTTS-SEEEEEECTTSSCEEEEEETTT---------------------CCE-EEEECCSSCEEEEE
T ss_pred EEeCCCCcceeeEEcCCC-CEEEEEEecCCCcEEEEEECCC---------------------CcE-EEeecCCCcccCEE
Confidence 445689999999999999 6888888775 999999986 233 35667888999999
Q ss_pred eCCCCCCeEE-EEeCCCc--EEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEEC-CC--cEEEEECCCCC
Q 018322 237 WNPITTGRLV-TGDCNSC--IYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSV-DG--HIAIWDTRVGK 310 (358)
Q Consensus 237 ~s~~~~~~l~-sgs~dg~--I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~-Dg--~I~iwD~r~~~ 310 (358)
|+|++. +|+ +++.++. |++||+.++.. ..+..|...+.+++|+|++. .|++++. ++ .|.+||+..+.
T Consensus 230 ~spdg~-~la~~~~~~g~~~i~~~d~~~~~~-----~~l~~~~~~~~~~~~spdg~-~l~~~s~~~g~~~i~~~d~~~~~ 302 (415)
T 2hqs_A 230 FSPDGS-KLAFALSKTGSLNLYVMDLASGQI-----RQVTDGRSNNTEPTWFPDSQ-NLAFTSDQAGRPQVYKVNINGGA 302 (415)
T ss_dssp ECTTSS-EEEEEECTTSSCEEEEEETTTCCE-----EECCCCSSCEEEEEECTTSS-EEEEEECTTSSCEEEEEETTSSC
T ss_pred EcCCCC-EEEEEEecCCCceEEEEECCCCCE-----EeCcCCCCcccceEECCCCC-EEEEEECCCCCcEEEEEECCCCC
Confidence 999998 676 7766655 99999976322 34567888999999999998 6776665 55 67777888743
Q ss_pred CeeEEEecCCCCeEEEEEeCCCCcEEEEEeCC---CCEEEEeCCCCC
Q 018322 311 SALTSFKAHNADVNVISWNRLASCLLASGSDD---GTFSIHDLRLLK 354 (358)
Q Consensus 311 ~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~D---g~i~iwDlr~~~ 354 (358)
...+..|...+.+++|+|++ .+|++++.+ +.|++||+.+.+
T Consensus 303 --~~~l~~~~~~~~~~~~spdG-~~l~~~~~~~g~~~i~~~d~~~~~ 346 (415)
T 2hqs_A 303 --PQRITWEGSQNQDADVSSDG-KFMVMVSSNGGQQHIAKQDLATGG 346 (415)
T ss_dssp --CEECCCSSSEEEEEEECTTS-SEEEEEEECSSCEEEEEEETTTCC
T ss_pred --EEEEecCCCcccCeEECCCC-CEEEEEECcCCceEEEEEECCCCC
Confidence 44556677789999999999 777776653 589999998765
No 131
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.71 E-value=7.1e-16 Score=137.15 Aligned_cols=163 Identities=15% Similarity=0.118 Sum_probs=119.3
Q ss_pred CCceeEEEEcCCCCcEEEEEe--CCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCC
Q 018322 165 QGCVNRIRAMTQNPHICASWA--DTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITT 242 (358)
Q Consensus 165 ~~~V~~i~~~p~~~~~lat~s--~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~ 242 (358)
...|.+++|+|++ .+|++++ .++.++||.+... ......+..+. .+.+++|+|++.
T Consensus 84 ~~~~~~~~~spdg-~~l~~~~~~~~~~~~l~~~~~~--------------------~~~~~~~~~~~-~~~~~~~spdg~ 141 (297)
T 2ojh_A 84 TICNNDHGISPDG-ALYAISDKVEFGKSAIYLLPST--------------------GGTPRLMTKNL-PSYWHGWSPDGK 141 (297)
T ss_dssp CCBCSCCEECTTS-SEEEEEECTTTSSCEEEEEETT--------------------CCCCEECCSSS-SEEEEEECTTSS
T ss_pred cccccceEECCCC-CEEEEEEeCCCCcceEEEEECC--------------------CCceEEeecCC-CccceEECCCCC
Confidence 4789999999999 6777777 4456666665431 12233343333 488999999998
Q ss_pred CeEE-EEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEE-ECCCcEEEEECCCCCCeeEEEecCC
Q 018322 243 GRLV-TGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASC-SVDGHIAIWDTRVGKSALTSFKAHN 320 (358)
Q Consensus 243 ~~l~-sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~-s~Dg~I~iwD~r~~~~~~~~~~~h~ 320 (358)
+|+ +++.++.+.||++...+... ..+..|...+.+++|+|++. .|+.+ ..++.++||++......+..+..|.
T Consensus 142 -~l~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 216 (297)
T 2ojh_A 142 -SFTYCGIRDQVFDIYSMDIDSGVE---TRLTHGEGRNDGPDYSPDGR-WIYFNSSRTGQMQIWRVRVDGSSVERITDSA 216 (297)
T ss_dssp -EEEEEEEETTEEEEEEEETTTCCE---EECCCSSSCEEEEEECTTSS-EEEEEECTTSSCEEEEEETTSSCEEECCCCS
T ss_pred -EEEEEECCCCceEEEEEECCCCcc---eEcccCCCccccceECCCCC-EEEEEecCCCCccEEEECCCCCCcEEEecCC
Confidence 665 78889999999975432222 34556778899999999998 55554 4699999999874344666777788
Q ss_pred CCeEEEEEeCCCCcEEEEEeCC-----------CCEEEEeCCCCCC
Q 018322 321 ADVNVISWNRLASCLLASGSDD-----------GTFSIHDLRLLKV 355 (358)
Q Consensus 321 ~~V~~i~~~p~~~~~lasgs~D-----------g~i~iwDlr~~~~ 355 (358)
..+..++|+|++ .+|++++.+ +.|.+||+.+.+.
T Consensus 217 ~~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 217 YGDWFPHPSPSG-DKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNV 261 (297)
T ss_dssp EEEEEEEECTTS-SEEEEEEEETTCCSCCSSEEEEEEEEETTSCSC
T ss_pred cccCCeEECCCC-CEEEEEEcCCCCCcccccCceEEEEEecCCCCc
Confidence 889999999999 777777655 5699999987653
No 132
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.69 E-value=1.9e-15 Score=134.37 Aligned_cols=164 Identities=11% Similarity=-0.009 Sum_probs=118.8
Q ss_pred EEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCC-CCCeEEEEeC
Q 018322 160 RKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGH-KDEGYAIDWN 238 (358)
Q Consensus 160 ~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~l~~s 238 (358)
.+..|.+.|.+++|+|++ .+|++++ ++.|++||+... ..+...+.+| ...+.+++|+
T Consensus 36 ~~~~~~~~v~~~~~spdg-~~l~~~~-~~~i~~~d~~~~--------------------~~~~~~~~~~~~~~~~~~~~s 93 (297)
T 2ojh_A 36 VVWQTPELFEAPNWSPDG-KYLLLNS-EGLLYRLSLAGD--------------------PSPEKVDTGFATICNNDHGIS 93 (297)
T ss_dssp EEEEESSCCEEEEECTTS-SEEEEEE-TTEEEEEESSSC--------------------CSCEECCCTTCCCBCSCCEEC
T ss_pred eeccCCcceEeeEECCCC-CEEEEEc-CCeEEEEeCCCC--------------------CCceEeccccccccccceEEC
Confidence 455689999999999999 6777766 789999998751 2233333444 3578899999
Q ss_pred CCCCCeEEEEe--CCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEE
Q 018322 239 PITTGRLVTGD--CNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSF 316 (358)
Q Consensus 239 ~~~~~~l~sgs--~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~ 316 (358)
|++. +|++++ .++.+.||.+...+... ..+..+ ..+..++|+|++..++++++.++.++||+++........+
T Consensus 94 pdg~-~l~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~ 168 (297)
T 2ojh_A 94 PDGA-LYAISDKVEFGKSAIYLLPSTGGTP---RLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRL 168 (297)
T ss_dssp TTSS-EEEEEECTTTSSCEEEEEETTCCCC---EECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEEC
T ss_pred CCCC-EEEEEEeCCCCcceEEEEECCCCce---EEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEc
Confidence 9998 888888 33556666554322211 223333 3488999999999555588899999999975433445666
Q ss_pred ecCCCCeEEEEEeCCCCcEEEE-EeCCCCEEEEeCC
Q 018322 317 KAHNADVNVISWNRLASCLLAS-GSDDGTFSIHDLR 351 (358)
Q Consensus 317 ~~h~~~V~~i~~~p~~~~~las-gs~Dg~i~iwDlr 351 (358)
..|...+.+++|+|++ .+|+. +..++.++||+++
T Consensus 169 ~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~i~~~~ 203 (297)
T 2ojh_A 169 THGEGRNDGPDYSPDG-RWIYFNSSRTGQMQIWRVR 203 (297)
T ss_dssp CCSSSCEEEEEECTTS-SEEEEEECTTSSCEEEEEE
T ss_pred ccCCCccccceECCCC-CEEEEEecCCCCccEEEEC
Confidence 7788899999999999 65554 4468999999886
No 133
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.63 E-value=4.6e-14 Score=128.58 Aligned_cols=171 Identities=6% Similarity=-0.038 Sum_probs=116.3
Q ss_pred EEEecCCCceeEEEEcCCCCcEEEEEeCC-CcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEe
Q 018322 159 LRKVAHQGCVNRIRAMTQNPHICASWADT-GHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDW 237 (358)
Q Consensus 159 ~~~~~H~~~V~~i~~~p~~~~~lat~s~d-g~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 237 (358)
.....|.+.+.+++|+|++ .+|++++.+ +.|++|++..... ....+..+..+. .+.+++|
T Consensus 31 ~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~v~~~~~~~~~~-----------------~~~~~~~~~~~~-~~~~~~~ 91 (343)
T 1ri6_A 31 TQVVDVPGQVQPMVVSPDK-RYLYVGVRPEFRVLAYRIAPDDG-----------------ALTFAAESALPG-SLTHIST 91 (343)
T ss_dssp EEEEECSSCCCCEEECTTS-SEEEEEETTTTEEEEEEECTTTC-----------------CEEEEEEEECSS-CCSEEEE
T ss_pred eeeEecCCCCceEEECCCC-CEEEEeecCCCeEEEEEecCCCC-----------------ceeeccccccCC-CCcEEEE
Confidence 4456788999999999999 555555554 9999999973100 012233444444 7789999
Q ss_pred CCCCCCeEEEEe-CCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEE-CCCcEEEEECCCCCCeeE-
Q 018322 238 NPITTGRLVTGD-CNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCS-VDGHIAIWDTRVGKSALT- 314 (358)
Q Consensus 238 s~~~~~~l~sgs-~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s-~Dg~I~iwD~r~~~~~~~- 314 (358)
+|++. +|++++ .++.|.+||+.. +........+. ....+.+++|+|++. .+++++ .++.|++||+........
T Consensus 92 s~dg~-~l~~~~~~~~~i~~~d~~~-~~~~~~~~~~~-~~~~~~~~~~s~dg~-~l~~~~~~~~~v~~~d~~~~~~~~~~ 167 (343)
T 1ri6_A 92 DHQGQ-FVFVGSYNAGNVSVTRLED-GLPVGVVDVVE-GLDGCHSANISPDNR-TLWVPALKQDRICLFTVSDDGHLVAQ 167 (343)
T ss_dssp CTTSS-EEEEEETTTTEEEEEEEET-TEEEEEEEEEC-CCTTBCCCEECTTSS-EEEEEEGGGTEEEEEEECTTSCEEEE
T ss_pred cCCCC-EEEEEecCCCeEEEEECCC-Ccccccccccc-CCCCceEEEECCCCC-EEEEecCCCCEEEEEEecCCCceeee
Confidence 99998 676655 488999999952 21111112222 234588999999998 455555 899999999987222211
Q ss_pred ---EEec-CCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCC
Q 018322 315 ---SFKA-HNADVNVISWNRLASCLLASGSDDGTFSIHDLRL 352 (358)
Q Consensus 315 ---~~~~-h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~ 352 (358)
.+.. ....+..++|+|++..+++++..++.|.+||+..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~ 209 (343)
T 1ri6_A 168 DPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKD 209 (343)
T ss_dssp EEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSC
T ss_pred cccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 2222 3457889999999944556666889999999964
No 134
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.63 E-value=3.7e-14 Score=139.12 Aligned_cols=159 Identities=8% Similarity=0.111 Sum_probs=121.7
Q ss_pred eeEEEEcCCCCcEEEEEeCCCcEEEEeC--CCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCC----CC
Q 018322 168 VNRIRAMTQNPHICASWADTGHVQVWDL--RSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNP----IT 241 (358)
Q Consensus 168 V~~i~~~p~~~~~lat~s~dg~V~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~----~~ 241 (358)
+..++|+|++ ++|++++.+++|++||+ .+ .+.+..+. +......++|+| ++
T Consensus 181 ~~~v~~spdg-~~l~v~~~d~~V~v~D~~~~t---------------------~~~~~~i~-~g~~p~~va~sp~~~~dg 237 (543)
T 1nir_A 181 VHISRMSASG-RYLLVIGRDARIDMIDLWAKE---------------------PTKVAEIK-IGIEARSVESSKFKGYED 237 (543)
T ss_dssp EEEEEECTTS-CEEEEEETTSEEEEEETTSSS---------------------CEEEEEEE-CCSEEEEEEECCSTTCTT
T ss_pred cceEEECCCC-CEEEEECCCCeEEEEECcCCC---------------------CcEEEEEe-cCCCcceEEeCCCcCCCC
Confidence 8999999999 78888899999999999 43 34455565 345679999999 99
Q ss_pred CCeEEEEe-CCCcEEEEecCCCCCcccCCCcccc----------CC-CcEEEEEECCCCCCEEEEEECCCcEEEEECCCC
Q 018322 242 TGRLVTGD-CNSCIYLWEPASDATWNVDPNPFIG----------HS-ASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVG 309 (358)
Q Consensus 242 ~~~l~sgs-~dg~I~lwd~~~~~~~~~~~~~~~~----------h~-~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~ 309 (358)
. +|++++ .+++|.+||..+... . ..+.. |. ..+..+.++|++..+++++..++.|.+||+...
T Consensus 238 ~-~l~v~~~~~~~v~v~D~~t~~~-~---~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~ 312 (543)
T 1nir_A 238 R-YTIAGAYWPPQFAIMDGETLEP-K---QIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDI 312 (543)
T ss_dssp T-EEEEEEEESSEEEEEETTTCCE-E---EEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTS
T ss_pred C-EEEEEEccCCeEEEEecccccc-c---eeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCC
Confidence 8 888887 489999999876332 2 11211 33 378999999998878888999999999999875
Q ss_pred CCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 310 KSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 310 ~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
.........+...+..+.|+|++..+++++..+++|.+||+.+++
T Consensus 313 ~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~ 357 (543)
T 1nir_A 313 DNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRR 357 (543)
T ss_dssp SSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTE
T ss_pred CcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCe
Confidence 433222234667788999999994455566678999999998764
No 135
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.62 E-value=3.1e-14 Score=129.73 Aligned_cols=168 Identities=13% Similarity=0.174 Sum_probs=114.2
Q ss_pred cCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCC
Q 018322 163 AHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITT 242 (358)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~ 242 (358)
...+.+..++|+|++..+++++..++.|++||+... . .......+..+ ..+.+++|+|++.
T Consensus 81 ~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~-~-----------------~~~~~~~~~~~-~~~~~~~~s~dg~ 141 (343)
T 1ri6_A 81 ALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDG-L-----------------PVGVVDVVEGL-DGCHSANISPDNR 141 (343)
T ss_dssp ECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETT-E-----------------EEEEEEEECCC-TTBCCCEECTTSS
T ss_pred ccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCC-c-----------------cccccccccCC-CCceEEEECCCCC
Confidence 334589999999999555566666899999998420 0 02233344433 3588999999998
Q ss_pred CeEEEEe-CCCcEEEEecCCCCCcccCCC--cccc-CCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCe---eEE
Q 018322 243 GRLVTGD-CNSCIYLWEPASDATWNVDPN--PFIG-HSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSA---LTS 315 (358)
Q Consensus 243 ~~l~sgs-~dg~I~lwd~~~~~~~~~~~~--~~~~-h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~---~~~ 315 (358)
+|++++ .++.|++||+...+.... .. .+.. ....+.+++|+|++..+++++..++.|++||+...... ...
T Consensus 142 -~l~~~~~~~~~v~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~ 219 (343)
T 1ri6_A 142 -TLWVPALKQDRICLFTVSDDGHLVA-QDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQT 219 (343)
T ss_dssp -EEEEEEGGGTEEEEEEECTTSCEEE-EEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEE
T ss_pred -EEEEecCCCCEEEEEEecCCCceee-ecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEee
Confidence 777776 899999999976333211 01 1222 33578899999999855566668999999999642111 222
Q ss_pred Ee----cC--CCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCC
Q 018322 316 FK----AH--NADVNVISWNRLASCLLASGSDDGTFSIHDLR 351 (358)
Q Consensus 316 ~~----~h--~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr 351 (358)
+. .+ ...+..++|+|++..+++++..++.|.+||+.
T Consensus 220 ~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 220 LDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp EECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred ccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence 22 11 23567899999994455567689999999998
No 136
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.62 E-value=5.4e-14 Score=128.94 Aligned_cols=162 Identities=14% Similarity=0.096 Sum_probs=118.5
Q ss_pred eeEEEEcCCCCcEEEEE-eCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCeEE
Q 018322 168 VNRIRAMTQNPHICASW-ADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLV 246 (358)
Q Consensus 168 V~~i~~~p~~~~~lat~-s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~l~ 246 (358)
+..+.|+|++..++++. +.++.|.+||+.. .+.+..+..+...+.+++|+|++. +|+
T Consensus 143 ~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~---------------------~~~~~~~~~~~~~~~~~~~s~dg~-~l~ 200 (353)
T 3vgz_A 143 PRELVADDATNTVYISGIGKESVIWVVDGGN---------------------IKLKTAIQNTGKMSTGLALDSEGK-RLY 200 (353)
T ss_dssp EEEEEEETTTTEEEEEEESSSCEEEEEETTT---------------------TEEEEEECCCCTTCCCCEEETTTT-EEE
T ss_pred CceEEECCCCCEEEEEecCCCceEEEEcCCC---------------------CceEEEecCCCCccceEEECCCCC-EEE
Confidence 68899999995555554 3578999999976 344555554555688999999998 899
Q ss_pred EEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEecCCCCeEEE
Q 018322 247 TGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVI 326 (358)
Q Consensus 247 sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i 326 (358)
+++.++.|.+||+.+............++...+.+++|+|++..+++++..++.|.+||+.++ ..+..+.... ...+
T Consensus 201 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~-~~~~~~~~~~--~~~~ 277 (353)
T 3vgz_A 201 TTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNG-NILAKVAAPE--SLAV 277 (353)
T ss_dssp EECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTC-CEEEEEECSS--CCCE
T ss_pred EEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCC-cEEEEEEcCC--CceE
Confidence 999999999999977432111001112355678899999999856666666799999999885 4555554433 2568
Q ss_pred EEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 327 SWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 327 ~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
+|+|++..++++...++.|.+||+.+++
T Consensus 278 ~~s~dg~~l~v~~~~~~~v~~~d~~~~~ 305 (353)
T 3vgz_A 278 LFNPARNEAYVTHRQAGKVSVIDAKSYK 305 (353)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTTTE
T ss_pred EECCCCCEEEEEECCCCeEEEEECCCCe
Confidence 9999994466666679999999998764
No 137
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.62 E-value=1.5e-13 Score=125.15 Aligned_cols=165 Identities=7% Similarity=0.007 Sum_probs=120.4
Q ss_pred cCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCC-cEEEcCCCCCeEEEEeCCCC
Q 018322 163 AHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSP-LVKFGGHKDEGYAIDWNPIT 241 (358)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~h~~~v~~l~~s~~~ 241 (358)
.+...+ .+.|+|++..+++++..++.|++||+.. ... ...+..+..+..+++|+|++
T Consensus 38 ~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~---------------------~~~~~~~~~~~~~~~~~~~~s~dg 95 (331)
T 3u4y_A 38 LGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQL---------------------EPPKVVAIQEGQSSMADVDITPDD 95 (331)
T ss_dssp CCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSS---------------------SSCEEEEEEECSSCCCCEEECTTS
T ss_pred ccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCC---------------------CceeEEecccCCCCccceEECCCC
Confidence 445666 9999999965666766689999999976 233 55566666666669999999
Q ss_pred CCeEEEEeCCC---cEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCc-EEEEECCCCCCee---E
Q 018322 242 TGRLVTGDCNS---CIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGH-IAIWDTRVGKSAL---T 314 (358)
Q Consensus 242 ~~~l~sgs~dg---~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~-I~iwD~r~~~~~~---~ 314 (358)
. +|+++..++ .|.+||+.+... . ..+. +.....+++|+|+++.+++++..++. |.+|++....... .
T Consensus 96 ~-~l~~~~~~~~~~~i~v~d~~~~~~-~---~~~~-~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~ 169 (331)
T 3u4y_A 96 Q-FAVTVTGLNHPFNMQSYSFLKNKF-I---STIP-IPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQ 169 (331)
T ss_dssp S-EEEECCCSSSSCEEEEEETTTTEE-E---EEEE-CCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEE
T ss_pred C-EEEEecCCCCcccEEEEECCCCCe-E---EEEE-CCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCC
Confidence 8 888655553 899999976322 2 2222 34457899999999877778788788 9999998643221 1
Q ss_pred EEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCCC
Q 018322 315 SFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKV 355 (358)
Q Consensus 315 ~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~~ 355 (358)
........+..++|+|++..+++++..++.|.+||+++++.
T Consensus 170 ~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 170 EFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN 210 (331)
T ss_dssp EEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS
T ss_pred ccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc
Confidence 22244556899999999944666776789999999987653
No 138
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.59 E-value=1.1e-13 Score=126.04 Aligned_cols=172 Identities=10% Similarity=0.098 Sum_probs=118.4
Q ss_pred EEEecCCCceeEEEEcCCCCcEEEEEeCCC---cEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEE
Q 018322 159 LRKVAHQGCVNRIRAMTQNPHICASWADTG---HVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAI 235 (358)
Q Consensus 159 ~~~~~H~~~V~~i~~~p~~~~~lat~s~dg---~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 235 (358)
.....+..++.++.|+|++ .+++++..++ .|++||+.. ...+..+..+ ....++
T Consensus 77 ~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~i~v~d~~~---------------------~~~~~~~~~~-~~~~~~ 133 (331)
T 3u4y_A 77 VAIQEGQSSMADVDITPDD-QFAVTVTGLNHPFNMQSYSFLK---------------------NKFISTIPIP-YDAVGI 133 (331)
T ss_dssp EEEEECSSCCCCEEECTTS-SEEEECCCSSSSCEEEEEETTT---------------------TEEEEEEECC-TTEEEE
T ss_pred EecccCCCCccceEECCCC-CEEEEecCCCCcccEEEEECCC---------------------CCeEEEEECC-CCccce
Confidence 3444566666669999999 5555555543 899999976 3344444433 456899
Q ss_pred EeCCCCCCeEEEEeCCCc-EEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCe--
Q 018322 236 DWNPITTGRLVTGDCNSC-IYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSA-- 312 (358)
Q Consensus 236 ~~s~~~~~~l~sgs~dg~-I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~-- 312 (358)
+|+|++..+++++..++. |.+|++...+...............+..++|+|+++.+++++..++.|++||+.++. .
T Consensus 134 ~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~-~~~ 212 (331)
T 3u4y_A 134 AISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPE-NIT 212 (331)
T ss_dssp EECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTT-SCE
T ss_pred EECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCc-ccc
Confidence 999999734455566688 999999764432111011123345689999999998566777789999999998753 4
Q ss_pred -eEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCCC
Q 018322 313 -LTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKV 355 (358)
Q Consensus 313 -~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~~ 355 (358)
+..+. ....+..++|+|++..++++...++.|.+||+.+++.
T Consensus 213 ~~~~~~-~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 213 LLNAVG-TNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTL 255 (331)
T ss_dssp EEEEEE-CSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEE
T ss_pred eeeecc-CCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCce
Confidence 44454 3456789999999933455555678999999987643
No 139
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.57 E-value=6.7e-14 Score=141.78 Aligned_cols=159 Identities=9% Similarity=0.088 Sum_probs=113.6
Q ss_pred CceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCeE
Q 018322 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRL 245 (358)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~l 245 (358)
..|..+.|+|++ ..|++++. +.|++||+.... ......+..|...+.+++|+|++. +|
T Consensus 109 ~~v~~~~~SpDg-~~l~~~~~-~~i~~~d~~~~~-------------------~~~~~~l~~~~~~~~~~~~SPDG~-~l 166 (741)
T 2ecf_A 109 TGIVDYQWSPDA-QRLLFPLG-GELYLYDLKQEG-------------------KAAVRQLTHGEGFATDAKLSPKGG-FV 166 (741)
T ss_dssp EESCCCEECTTS-SEEEEEET-TEEEEEESSSCS-------------------TTSCCBCCCSSSCEEEEEECTTSS-EE
T ss_pred cCcceeEECCCC-CEEEEEeC-CcEEEEECCCCC-------------------cceEEEcccCCcccccccCCCCCC-EE
Confidence 458899999999 67777776 999999997610 002334566777899999999998 89
Q ss_pred EEEeCCCcEEEEecCCCCCcccCCCccccCCC----------------cEEEEEECCCCCCEEEEEECCC----------
Q 018322 246 VTGDCNSCIYLWEPASDATWNVDPNPFIGHSA----------------SVEDLQWSPTEPDVFASCSVDG---------- 299 (358)
Q Consensus 246 ~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~----------------~V~~v~~sp~~~~~las~s~Dg---------- 299 (358)
+.++ ++.|++||+.++ ... .....+.. .+.+++|||++. .|++++.|+
T Consensus 167 a~~~-~~~i~~~d~~~g-~~~---~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~-~l~~~~~d~~~~~~~~~~~ 240 (741)
T 2ecf_A 167 SFIR-GRNLWVIDLASG-RQM---QLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDS-AIAYARIDESPVPVQKRYE 240 (741)
T ss_dssp EEEE-TTEEEEEETTTT-EEE---ECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSS-CEEEEEEECTTSCEEEEEE
T ss_pred EEEe-CCcEEEEecCCC-CEE---EeccCCccceeccccceeeeeccccccceEECCCCC-EEEEEEEcCCCCceEecCC
Confidence 8887 569999999763 221 11111222 247899999999 677776655
Q ss_pred -----------------------cEEEEECCC-CCCeeEEEe-cCCCCeEEEEEeCCCCcEEEEEeC-----CCCEEEEe
Q 018322 300 -----------------------HIAIWDTRV-GKSALTSFK-AHNADVNVISWNRLASCLLASGSD-----DGTFSIHD 349 (358)
Q Consensus 300 -----------------------~I~iwD~r~-~~~~~~~~~-~h~~~V~~i~~~p~~~~~lasgs~-----Dg~i~iwD 349 (358)
.|++||+.+ +........ .|...+..++| |++ ..|++++. +..|++||
T Consensus 241 ~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg-~~l~~~~~~~~~~~~~i~~~d 318 (741)
T 2ecf_A 241 VYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDP-QHLSFQRQSRDQKKLDLVEVT 318 (741)
T ss_dssp ECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EET-TEEEEEEEETTSSEEEEEEEE
T ss_pred CCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCC-CEEEEEEecccCCeEEEEEEE
Confidence 789999987 542211111 47778999999 999 66665543 56899999
Q ss_pred CCCCC
Q 018322 350 LRLLK 354 (358)
Q Consensus 350 lr~~~ 354 (358)
+.+++
T Consensus 319 ~~~g~ 323 (741)
T 2ecf_A 319 LASNQ 323 (741)
T ss_dssp TTTCC
T ss_pred CCCCc
Confidence 98765
No 140
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.57 E-value=2.3e-13 Score=124.97 Aligned_cols=201 Identities=6% Similarity=0.053 Sum_probs=138.0
Q ss_pred eEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCeE-EEEEecCCCc
Q 018322 89 TAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDDDEEGGSGTPIL-QLRKVAHQGC 167 (358)
Q Consensus 89 ~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~H~~~ 167 (358)
.+++.+|+.+.. ....|.|+.+.. ....+ ......+...
T Consensus 2 ~~~~~vg~y~~~-~~~~i~v~~~d~---------------------------------------~tg~~~~~~~~~~~~~ 41 (347)
T 3hfq_A 2 QERILFGTYTKK-TSQGIYQGTLDT---------------------------------------TAKTLTNDGLLAATQN 41 (347)
T ss_dssp EEEEEEEECCSS-SCCEEEEEEEET---------------------------------------TTTEEEEEEEEEECSC
T ss_pred CcEEEEEeccCC-CCCCEEEEEEcC---------------------------------------CCCeEEEeeeeeccCC
Confidence 367888988765 456799998831 02222 2355667788
Q ss_pred eeEEEEcCCCCcEEEEEeC--CCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCeE
Q 018322 168 VNRIRAMTQNPHICASWAD--TGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRL 245 (358)
Q Consensus 168 V~~i~~~p~~~~~lat~s~--dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~l 245 (358)
+..++|+|++ .++++... ++.|++|++.... ...+..+..+...+..++|+|++. +|
T Consensus 42 p~~~a~spdg-~l~~~~~~~~~~~v~~~~~~~g~-------------------~~~~~~~~~~~~~p~~~a~spdg~-~l 100 (347)
T 3hfq_A 42 PTYLALSAKD-CLYSVDKEDDEGGIAAWQIDGQT-------------------AHKLNTVVAPGTPPAYVAVDEARQ-LV 100 (347)
T ss_dssp CCCEEECTTC-EEEEEEEETTEEEEEEEEEETTE-------------------EEEEEEEEEESCCCSEEEEETTTT-EE
T ss_pred cceEEEccCC-eEEEEEecCCCceEEEEEecCCc-------------------EEEeeeeecCCCCCEEEEECCCCC-EE
Confidence 8999999999 46655543 6899999995411 123334445667788999999998 78
Q ss_pred EEEe-CCCcEEEEecCCCCCcccCCCccc---------cCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCee--
Q 018322 246 VTGD-CNSCIYLWEPASDATWNVDPNPFI---------GHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSAL-- 313 (358)
Q Consensus 246 ~sgs-~dg~I~lwd~~~~~~~~~~~~~~~---------~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~-- 313 (358)
++++ .++.|.+|++...+.... ...+. .+...+.+++|+|++. +++++..++.|++|++.......
T Consensus 101 ~~~~~~~~~v~v~~~~~~g~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~ 178 (347)
T 3hfq_A 101 YSANYHKGTAEVMKIAADGALTL-TDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQ 178 (347)
T ss_dssp EEEETTTTEEEEEEECTTSCEEE-EEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEEE
T ss_pred EEEeCCCCEEEEEEeCCCCCeee-cceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEEe
Confidence 8777 689999999964333211 11111 1223588999999999 88888889999999998422221
Q ss_pred EEEec-CCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCC
Q 018322 314 TSFKA-HNADVNVISWNRLASCLLASGSDDGTFSIHDLRL 352 (358)
Q Consensus 314 ~~~~~-h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~ 352 (358)
..+.. ....++.++|+|++..+++++..++.|.+|++..
T Consensus 179 ~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~ 218 (347)
T 3hfq_A 179 SVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDT 218 (347)
T ss_dssp EEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred eeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 12222 2346888999999943566667789999999874
No 141
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.56 E-value=5.8e-13 Score=121.99 Aligned_cols=163 Identities=10% Similarity=0.005 Sum_probs=120.7
Q ss_pred CCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCC---------CeEE
Q 018322 164 HQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKD---------EGYA 234 (358)
Q Consensus 164 H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---------~v~~ 234 (358)
+...+..+.|+|++..++++...++.|.+||... .+.+..+..+.. .+.+
T Consensus 87 ~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (353)
T 3vgz_A 87 NDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKT---------------------GEVKGRLVLDDRKRTEEVRPLQPRE 145 (353)
T ss_dssp ESSCCCSEEEETTTTEEEEEETTTTEEEEEETTT---------------------CCEEEEEESCCCCCCSSCCCCEEEE
T ss_pred cCCCcceEEECCCCCEEEEEecCCCEEEEEeCCC---------------------CeeEEEEecCCCccccccCCCCCce
Confidence 3456889999999966777878889999999976 344444444322 2688
Q ss_pred EEeCCCCCCeEEEEe--CCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCe
Q 018322 235 IDWNPITTGRLVTGD--CNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSA 312 (358)
Q Consensus 235 l~~s~~~~~~l~sgs--~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~ 312 (358)
++|+|++. ++++++ .++.|.+||+.+... . ..+..+...+.+++|+|++. .+++++.++.|.+||+.++ ..
T Consensus 146 ~~~s~dg~-~l~~~~~~~~~~i~~~d~~~~~~-~---~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~i~~~d~~~~-~~ 218 (353)
T 3vgz_A 146 LVADDATN-TVYISGIGKESVIWVVDGGNIKL-K---TAIQNTGKMSTGLALDSEGK-RLYTTNADGELITIDTADN-KI 218 (353)
T ss_dssp EEEETTTT-EEEEEEESSSCEEEEEETTTTEE-E---EEECCCCTTCCCCEEETTTT-EEEEECTTSEEEEEETTTT-EE
T ss_pred EEECCCCC-EEEEEecCCCceEEEEcCCCCce-E---EEecCCCCccceEEECCCCC-EEEEEcCCCeEEEEECCCC-eE
Confidence 99999997 666665 478999999976322 2 23333455688899999998 7888888999999999985 34
Q ss_pred eEEEec----CCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 313 LTSFKA----HNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 313 ~~~~~~----h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
+..+.. +...+..++|+|++..++++...++.|.+||+.+++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~ 264 (353)
T 3vgz_A 219 LSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGN 264 (353)
T ss_dssp EEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCC
T ss_pred EEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCc
Confidence 444433 455688999999994455555566999999998765
No 142
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.55 E-value=6.8e-14 Score=141.30 Aligned_cols=159 Identities=9% Similarity=0.031 Sum_probs=112.9
Q ss_pred ceeEEEEcCCCCcEEEEEeCC---------CcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEe
Q 018322 167 CVNRIRAMTQNPHICASWADT---------GHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDW 237 (358)
Q Consensus 167 ~V~~i~~~p~~~~~lat~s~d---------g~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 237 (358)
.|..+.|+|++ ..||+++.+ +.|++||+.... ...+....+|...+.+++|
T Consensus 62 ~v~~~~~SpDg-~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~-------------------~~~l~~~~~~~~~~~~~~~ 121 (723)
T 1xfd_A 62 RAIRYEISPDR-EYALFSYNVEPIYQHSYTGYYVLSKIPHGD-------------------PQSLDPPEVSNAKLQYAGW 121 (723)
T ss_dssp TCSEEEECTTS-SEEEEEESCCCCSSSCCCSEEEEEESSSCC-------------------CEECCCTTCCSCCCSBCCB
T ss_pred ccceEEECCCC-CEEEEEecCccceeecceeeEEEEECCCCc-------------------eEeccCCccccccccccEE
Confidence 49999999999 677777764 788899997621 1111112345556889999
Q ss_pred CCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCC------------------cEEEEEECCCCCCEEEEEECCC
Q 018322 238 NPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSA------------------SVEDLQWSPTEPDVFASCSVDG 299 (358)
Q Consensus 238 s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~------------------~V~~v~~sp~~~~~las~s~Dg 299 (358)
||++. +||.++. +.|++|++.++.... ....+.. .+.+++|||+++ .|++++.++
T Consensus 122 SPdG~-~la~~~~-~~i~~~~~~~g~~~~----~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~-~la~~~~~~ 194 (723)
T 1xfd_A 122 GPKGQ-QLIFIFE-NNIYYCAHVGKQAIR----VVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGT-RLAYAAIND 194 (723)
T ss_dssp CSSTT-CEEEEET-TEEEEESSSSSCCEE----EECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSS-EEEEEEEEC
T ss_pred CCCCC-EEEEEEC-CeEEEEECCCCceEE----EecCCCCCceECcccceeEEEEeccCcceEEECCCCC-EEEEEEECC
Confidence 99998 8998885 799999997643211 1112222 237899999999 787777543
Q ss_pred ----------------------------------cEEEEECCCCCCeeEEEecC------CCCeEEEEEeCCCCcEEEEE
Q 018322 300 ----------------------------------HIAIWDTRVGKSALTSFKAH------NADVNVISWNRLASCLLASG 339 (358)
Q Consensus 300 ----------------------------------~I~iwD~r~~~~~~~~~~~h------~~~V~~i~~~p~~~~~lasg 339 (358)
.|++||+.++. ....+..+ ...+..++|+|++ .+|++.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~~~~~~~~~~~~SpDg-~~l~~~ 272 (723)
T 1xfd_A 195 SRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPT-HDLEMMPPDDPRMREYYITMVKWATST-KVAVTW 272 (723)
T ss_dssp TTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSC-CCEECCCCCCGGGSSEEEEEEEESSSS-EEEEEE
T ss_pred CccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCc-eeEEeeCCccCCCccceeEEEEEeCCC-eEEEEE
Confidence 79999998753 33445443 5678999999999 777666
Q ss_pred eC----CCCEEEEeCCCCC
Q 018322 340 SD----DGTFSIHDLRLLK 354 (358)
Q Consensus 340 s~----Dg~i~iwDlr~~~ 354 (358)
+. +..|++||+.+++
T Consensus 273 ~~~~~~~~~i~~~d~~~g~ 291 (723)
T 1xfd_A 273 LNRAQNVSILTLCDATTGV 291 (723)
T ss_dssp EETTSCEEEEEEEETTTCC
T ss_pred EcCCCCeEEEEEEeCCCCc
Confidence 43 3579999998765
No 143
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.55 E-value=9e-13 Score=129.23 Aligned_cols=164 Identities=11% Similarity=0.049 Sum_probs=119.1
Q ss_pred ecCCCceeEEEEcC----CCCcEEEEEe-CCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcC---------
Q 018322 162 VAHQGCVNRIRAMT----QNPHICASWA-DTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGG--------- 227 (358)
Q Consensus 162 ~~H~~~V~~i~~~p----~~~~~lat~s-~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 227 (358)
+.+...+..+.|+| ++ .++++++ .+++|.|||... .+++..+..
T Consensus 218 i~~g~~p~~va~sp~~~~dg-~~l~v~~~~~~~v~v~D~~t---------------------~~~~~~i~~~g~~~~~~~ 275 (543)
T 1nir_A 218 IKIGIEARSVESSKFKGYED-RYTIAGAYWPPQFAIMDGET---------------------LEPKQIVSTRGMTVDTQT 275 (543)
T ss_dssp EECCSEEEEEEECCSTTCTT-TEEEEEEEESSEEEEEETTT---------------------CCEEEEEECCEECSSSCC
T ss_pred EecCCCcceEEeCCCcCCCC-CEEEEEEccCCeEEEEeccc---------------------cccceeecccCcccCccc
Confidence 34566789999999 88 5666665 589999999876 344444443
Q ss_pred -CC-CCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEE
Q 018322 228 -HK-DEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWD 305 (358)
Q Consensus 228 -h~-~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD 305 (358)
|. ..+.++.++|++..++++...++.|.+||+.+..... .....+...+.++.|+|+++.+++++..+++|.+||
T Consensus 276 ~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~---~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D 352 (543)
T 1nir_A 276 YHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLT---VTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVID 352 (543)
T ss_dssp EESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCE---EEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEE
T ss_pred cccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcce---eEEeccCcCccCceECCCCCEEEEEecCCCeEEEEE
Confidence 22 3788999999887577888889999999997643211 112235667889999999995566666799999999
Q ss_pred CCCCCCeeEEEec----CCCCeEEEEEeCCCCcEEEEEe-CCCCEEEEeCCC
Q 018322 306 TRVGKSALTSFKA----HNADVNVISWNRLASCLLASGS-DDGTFSIHDLRL 352 (358)
Q Consensus 306 ~r~~~~~~~~~~~----h~~~V~~i~~~p~~~~~lasgs-~Dg~i~iwDlr~ 352 (358)
+.++ +++..+.. |......+ ++|++..+++|++ .|++|.+||+.+
T Consensus 353 ~~tg-~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 353 SKDR-RLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp TTTT-EEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred CCCC-eEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCC
Confidence 9985 45555543 65433333 5777437888886 689999999987
No 144
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.54 E-value=1.2e-13 Score=139.85 Aligned_cols=147 Identities=11% Similarity=0.119 Sum_probs=107.7
Q ss_pred CCceeEEEEcCCCCcEEEEEeC-CC-----cEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCC---------
Q 018322 165 QGCVNRIRAMTQNPHICASWAD-TG-----HVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHK--------- 229 (358)
Q Consensus 165 ~~~V~~i~~~p~~~~~lat~s~-dg-----~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~--------- 229 (358)
...|+.++|+|+| ..||+++. ++ .|++||+... .....+..+.
T Consensus 36 ~~~~~~~~~SpdG-~~la~~~~~d~~~~~~~i~~~d~~~g---------------------~~~~~~~~~~~~~~~~~~~ 93 (741)
T 2ecf_A 36 GPTLMKPKVAPDG-SRVTFLRGKDSDRNQLDLWSYDIGSG---------------------QTRLLVDSKVVLPGTETLS 93 (741)
T ss_dssp CCCCEEEEECTTS-SEEEEEECCSSCTTEEEEEEEETTTC---------------------CEEEEECGGGTC-------
T ss_pred CCCCCCceEecCC-CEEEEEeccCCCCcccEEEEEECCCC---------------------ceeEccchhhccccccccc
Confidence 4578999999999 68888887 88 8999999763 2222221111
Q ss_pred ---------------CCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCC--CcccCCCccccCCCcEEEEEECCCCCCEE
Q 018322 230 ---------------DEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDA--TWNVDPNPFIGHSASVEDLQWSPTEPDVF 292 (358)
Q Consensus 230 ---------------~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~--~~~~~~~~~~~h~~~V~~v~~sp~~~~~l 292 (358)
..+.+++|+|++. +|++++. +.|++||+.++. . ...+..|...+.+++|||+++ .|
T Consensus 94 ~~~~~~~~~~~~~~~~~v~~~~~SpDg~-~l~~~~~-~~i~~~d~~~~~~~~----~~~l~~~~~~~~~~~~SPDG~-~l 166 (741)
T 2ecf_A 94 DEEKARRERQRIAAMTGIVDYQWSPDAQ-RLLFPLG-GELYLYDLKQEGKAA----VRQLTHGEGFATDAKLSPKGG-FV 166 (741)
T ss_dssp -------------CCEESCCCEECTTSS-EEEEEET-TEEEEEESSSCSTTS----CCBCCCSSSCEEEEEECTTSS-EE
T ss_pred chhhhhhhhhhhccccCcceeEECCCCC-EEEEEeC-CcEEEEECCCCCcce----EEEcccCCcccccccCCCCCC-EE
Confidence 2378999999998 8888885 999999997641 2 245667788899999999999 88
Q ss_pred EEEECCCcEEEEECCCCCCeeEEEecCCCC----------------eEEEEEeCCCCcEEEEEeCCC
Q 018322 293 ASCSVDGHIAIWDTRVGKSALTSFKAHNAD----------------VNVISWNRLASCLLASGSDDG 343 (358)
Q Consensus 293 as~s~Dg~I~iwD~r~~~~~~~~~~~h~~~----------------V~~i~~~p~~~~~lasgs~Dg 343 (358)
++++ ++.|++||+.++. .......+... +..++|+|+| ..|++++.|+
T Consensus 167 a~~~-~~~i~~~d~~~g~-~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg-~~l~~~~~d~ 230 (741)
T 2ecf_A 167 SFIR-GRNLWVIDLASGR-QMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDD-SAIAYARIDE 230 (741)
T ss_dssp EEEE-TTEEEEEETTTTE-EEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTS-SCEEEEEEEC
T ss_pred EEEe-CCcEEEEecCCCC-EEEeccCCccceeccccceeeeeccccccceEECCCC-CEEEEEEEcC
Confidence 8877 4699999998742 22222222222 4779999999 7777776655
No 145
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.54 E-value=1.7e-12 Score=117.83 Aligned_cols=156 Identities=9% Similarity=0.051 Sum_probs=110.5
Q ss_pred ceeEEEEcCCCCcEEEEEe------------CCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEE
Q 018322 167 CVNRIRAMTQNPHICASWA------------DTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYA 234 (358)
Q Consensus 167 ~V~~i~~~p~~~~~lat~s------------~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 234 (358)
.+..+.|+|++ ..+++++ .++.|.+||+.. .+.+..+.. ...+.+
T Consensus 83 ~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~---------------------~~~~~~~~~-~~~~~~ 139 (337)
T 1pby_B 83 SLFGAALSPDG-KTLAIYESPVRLELTHFEVQPTRVALYDAET---------------------LSRRKAFEA-PRQITM 139 (337)
T ss_dssp CTTCEEECTTS-SEEEEEEEEEEECSSCEEECCCEEEEEETTT---------------------TEEEEEEEC-CSSCCC
T ss_pred cccceEECCCC-CEEEEEecccccccccccccCceEEEEECCC---------------------CcEEEEEeC-CCCcce
Confidence 67889999999 5566654 579999999976 233334433 345778
Q ss_pred EEeCCCCCCeEEEEeCCCcEEEEecCCCCCccc-C--C--Cc--------------------------------------
Q 018322 235 IDWNPITTGRLVTGDCNSCIYLWEPASDATWNV-D--P--NP-------------------------------------- 271 (358)
Q Consensus 235 l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~-~--~--~~-------------------------------------- 271 (358)
++|+|++. +|+++ ++.|.+||+.++..... . . ..
T Consensus 140 ~~~s~dg~-~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (337)
T 1pby_B 140 LAWARDGS-KLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTA 216 (337)
T ss_dssp EEECTTSS-CEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGG
T ss_pred eEECCCCC-EEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccc
Confidence 99999997 77777 68899999876321100 0 0 00
Q ss_pred -------------------cccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEecCCCCeEEEEEeCCC
Q 018322 272 -------------------FIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRLA 332 (358)
Q Consensus 272 -------------------~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~~p~~ 332 (358)
+..+...+.+++|+|++. .++++ ++.|++||+.++ ..+..+.. ...+.+++|+|++
T Consensus 217 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~-~l~~~--~~~v~~~d~~~~-~~~~~~~~-~~~~~~~~~s~dg 291 (337)
T 1pby_B 217 YRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKT-RAFGA--YNVLESFDLEKN-ASIKRVPL-PHSYYSVNVSTDG 291 (337)
T ss_dssp EEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSS-EEEEE--ESEEEEEETTTT-EEEEEEEC-SSCCCEEEECTTS
T ss_pred cccceEEEeCCCCCceEeecCCCCCceeeEEECCCCC-EEEEe--CCeEEEEECCCC-cCcceecC-CCceeeEEECCCC
Confidence 011223456799999998 66666 799999999874 34444443 3467899999999
Q ss_pred CcEEEEEeCCCCEEEEeCCCCC
Q 018322 333 SCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 333 ~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
.+|++++.++.|.+||+.+++
T Consensus 292 -~~l~~~~~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 292 -STVWLGGALGDLAAYDAETLE 312 (337)
T ss_dssp -CEEEEESBSSEEEEEETTTCC
T ss_pred -CEEEEEcCCCcEEEEECcCCc
Confidence 777778889999999998765
No 146
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.54 E-value=2e-12 Score=118.71 Aligned_cols=163 Identities=7% Similarity=0.018 Sum_probs=112.2
Q ss_pred CceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCC-CCCeEEEEeCCCCCCe
Q 018322 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGH-KDEGYAIDWNPITTGR 244 (358)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~l~~s~~~~~~ 244 (358)
..+.++.|+|++. ++++...++.|++|++.... .......+..+ ......++|+|++. +
T Consensus 141 ~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g------------------~~~~~~~~~~~~g~~p~~~~~spdg~-~ 200 (347)
T 3hfq_A 141 SHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAG------------------QLSEQSVLTMEAGFGPRHLVFSPDGQ-Y 200 (347)
T ss_dssp CCEEEEEECTTSC-EEEEETTTTEEEEEEECTTS------------------CEEEEEEEECCTTCCEEEEEECTTSS-E
T ss_pred CCceEEEECCCCc-EEEEeCCCCEEEEEEECCCC------------------cEEEeeeEEcCCCCCCceEEECCCCC-E
Confidence 3588999999995 88888889999999998310 00111222222 23677899999997 5
Q ss_pred EEE-EeCCCcEEEEecCCC-CCcccCCCccccC------CCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCC--CeeE
Q 018322 245 LVT-GDCNSCIYLWEPASD-ATWNVDPNPFIGH------SASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGK--SALT 314 (358)
Q Consensus 245 l~s-gs~dg~I~lwd~~~~-~~~~~~~~~~~~h------~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~--~~~~ 314 (358)
|++ +..++.|.+|++... +... ....+... ...+..++|+|+++.+++++..++.|.+|++.... ..+.
T Consensus 201 l~v~~~~~~~v~v~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~ 279 (347)
T 3hfq_A 201 AFLAGELSSQIASLKYDTQTGAFT-QLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQ 279 (347)
T ss_dssp EEEEETTTTEEEEEEEETTTTEEE-EEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEE
T ss_pred EEEEeCCCCEEEEEEecCCCCceE-EeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeE
Confidence 555 567889999998742 2211 01111111 14588999999999566778889999999997422 2344
Q ss_pred EEecCCCCeEEEEEeCCCCcEEEEEe-CCCCEEEEeC
Q 018322 315 SFKAHNADVNVISWNRLASCLLASGS-DDGTFSIHDL 350 (358)
Q Consensus 315 ~~~~h~~~V~~i~~~p~~~~~lasgs-~Dg~i~iwDl 350 (358)
.+..+...+..++|+|++ .+|++++ .++.|.+|++
T Consensus 280 ~~~~~~~~~~~~~~spdg-~~l~v~~~~~~~v~v~~~ 315 (347)
T 3hfq_A 280 QISTEGDFPRDFDLDPTE-AFVVVVNQNTDNATLYAR 315 (347)
T ss_dssp EEECSSSCCCEEEECTTS-SEEEEEETTTTEEEEEEE
T ss_pred EEecCCCCcCeEEECCCC-CEEEEEEcCCCcEEEEEE
Confidence 455666778999999999 6666665 4589999944
No 147
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.52 E-value=4.6e-13 Score=141.19 Aligned_cols=159 Identities=12% Similarity=-0.030 Sum_probs=128.0
Q ss_pred EecCCC-ceeEEEEcCCCCcEEEEEeCCCcEE-EEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeC
Q 018322 161 KVAHQG-CVNRIRAMTQNPHICASWADTGHVQ-VWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWN 238 (358)
Q Consensus 161 ~~~H~~-~V~~i~~~p~~~~~lat~s~dg~V~-iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 238 (358)
+..|.+ .+..+.|+ ++ ..|++++.++.|. +|++.. .. ...+.+|...+.+++|+
T Consensus 332 ~~~~~~~~~~~~~~s-dg-~~l~~~s~~~~l~~~~d~~~---------------------~~-~~~l~~~~~~~~~~~~S 387 (1045)
T 1k32_A 332 VPEPLRIRYVRRGGD-TK-VAFIHGTREGDFLGIYDYRT---------------------GK-AEKFEENLGNVFAMGVD 387 (1045)
T ss_dssp CSCCSCEEEEEECSS-SE-EEEEEEETTEEEEEEEETTT---------------------CC-EEECCCCCCSEEEEEEC
T ss_pred ccCCCcceEEeeeEc-CC-CeEEEEECCCceEEEEECCC---------------------CC-ceEecCCccceeeeEEC
Confidence 456777 89999999 77 6788888888888 888865 22 23344777899999999
Q ss_pred CCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCC----------cEEEEECCC
Q 018322 239 PITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDG----------HIAIWDTRV 308 (358)
Q Consensus 239 ~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg----------~I~iwD~r~ 308 (358)
|++. +|++++.++.|++||+.++ ... ....+|...+.+++|+|+++ .|++++.++ .|++||+.+
T Consensus 388 pDG~-~la~~~~~~~v~~~d~~tg-~~~---~~~~~~~~~v~~~~~SpDG~-~la~~~~~~~~~~~~~~~~~i~l~d~~~ 461 (1045)
T 1k32_A 388 RNGK-FAVVANDRFEIMTVDLETG-KPT---VIERSREAMITDFTISDNSR-FIAYGFPLKHGETDGYVMQAIHVYDMEG 461 (1045)
T ss_dssp TTSS-EEEEEETTSEEEEEETTTC-CEE---EEEECSSSCCCCEEECTTSC-EEEEEEEECSSTTCSCCEEEEEEEETTT
T ss_pred CCCC-EEEEECCCCeEEEEECCCC-ceE---EeccCCCCCccceEECCCCC-eEEEEecCccccccCCCCCeEEEEECCC
Confidence 9998 9999999999999999764 322 23447888999999999999 777776544 999999987
Q ss_pred CCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCC
Q 018322 309 GKSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRL 352 (358)
Q Consensus 309 ~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~ 352 (358)
+ ....+..|...+..++|+|+| ..|++++.++...+|+...
T Consensus 462 g--~~~~l~~~~~~~~~~~~spdG-~~l~~~s~~~~~~~~~~~~ 502 (1045)
T 1k32_A 462 R--KIFAATTENSHDYAPAFDADS-KNLYYLSYRSLDPSPDRVV 502 (1045)
T ss_dssp T--EEEECSCSSSBEEEEEECTTS-CEEEEEESCCCCCEECSSS
T ss_pred C--cEEEeeCCCcccCCceEcCCC-CEEEEEecccCCcCcchhc
Confidence 4 366677888889999999999 8888888888888888654
No 148
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.50 E-value=8.4e-13 Score=133.27 Aligned_cols=161 Identities=9% Similarity=0.035 Sum_probs=107.8
Q ss_pred cCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCC------------
Q 018322 163 AHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKD------------ 230 (358)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~------------ 230 (358)
.|...+..++|+|++ +.||+++. +.|++||+.. .........+..
T Consensus 111 ~~~~~~~~~~~SPdG-~~la~~~~-~~i~~~~~~~---------------------g~~~~~~~~~~~~~~~~g~~~~v~ 167 (723)
T 1xfd_A 111 VSNAKLQYAGWGPKG-QQLIFIFE-NNIYYCAHVG---------------------KQAIRVVSTGKEGVIYNGLSDWLY 167 (723)
T ss_dssp CCSCCCSBCCBCSST-TCEEEEET-TEEEEESSSS---------------------SCCEEEECCCBTTTEEEEECCHHH
T ss_pred cccccccccEECCCC-CEEEEEEC-CeEEEEECCC---------------------CceEEEecCCCCCceECcccceeE
Confidence 355568999999999 67777776 7999999976 233333333222
Q ss_pred ------CeEEEEeCCCCCCeEEEEeCCC----------------------------------cEEEEecCCCCCcccCC-
Q 018322 231 ------EGYAIDWNPITTGRLVTGDCNS----------------------------------CIYLWEPASDATWNVDP- 269 (358)
Q Consensus 231 ------~v~~l~~s~~~~~~l~sgs~dg----------------------------------~I~lwd~~~~~~~~~~~- 269 (358)
.+.+++|+|++. +|++++.++ .|++||+.++.......
T Consensus 168 ~ee~~~~~~~~~~SpDg~-~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~ 246 (723)
T 1xfd_A 168 EEEILKTHIAHWWSPDGT-RLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMP 246 (723)
T ss_dssp HHTTSSSSEEEEECTTSS-EEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCC
T ss_pred EEEeccCcceEEECCCCC-EEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeC
Confidence 237899999998 888887543 79999997643211100
Q ss_pred -CccccCCCcEEEEEECCCCCCEEEEEEC----CCcEEEEECCCCCCeeEEEe-cCCCCeE----EEEEeCCCCcEEEE-
Q 018322 270 -NPFIGHSASVEDLQWSPTEPDVFASCSV----DGHIAIWDTRVGKSALTSFK-AHNADVN----VISWNRLASCLLAS- 338 (358)
Q Consensus 270 -~~~~~h~~~V~~v~~sp~~~~~las~s~----Dg~I~iwD~r~~~~~~~~~~-~h~~~V~----~i~~~p~~~~~las- 338 (358)
..+..+...+.+++|+|+++ ++++.+. +..|++||+.++. +...+. .+...+. .++|+|+|..+++.
T Consensus 247 ~~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~~i~~~d~~~g~-~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 324 (723)
T 1xfd_A 247 PDDPRMREYYITMVKWATSTK-VAVTWLNRAQNVSILTLCDATTGV-CTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIR 324 (723)
T ss_dssp CCCGGGSSEEEEEEEESSSSE-EEEEEEETTSCEEEEEEEETTTCC-EEEEEEEECSSCCCCCCCCCEECTTSCSEEEEE
T ss_pred CccCCCccceeEEEEEeCCCe-EEEEEEcCCCCeEEEEEEeCCCCc-ceEEEEeccCCEEeccCCCceEcCCCCeEEEEE
Confidence 11223467899999999998 6766543 3589999998853 333332 3444443 78999999545544
Q ss_pred EeCCC------CEEEEe
Q 018322 339 GSDDG------TFSIHD 349 (358)
Q Consensus 339 gs~Dg------~i~iwD 349 (358)
+..++ .|.+||
T Consensus 325 ~~~~~~~~~~~~l~~~d 341 (723)
T 1xfd_A 325 AIPQGGRGKFYHITVSS 341 (723)
T ss_dssp EECCSSSSCEEEEEEEC
T ss_pred ecccCCCcceeEEEEEe
Confidence 55677 577788
No 149
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.49 E-value=9.8e-12 Score=114.81 Aligned_cols=203 Identities=10% Similarity=0.014 Sum_probs=133.3
Q ss_pred eEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCeEEEEEecCCCce
Q 018322 89 TAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDEDSDDDEEGGSGTPILQLRKVAHQGCV 168 (358)
Q Consensus 89 ~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~V 168 (358)
..++.+||.+.+ ..+.|+++.+.. + .......... |...+
T Consensus 13 ~~~~~vg~y~~~-~~~~i~~~~~d~-------------------------------~-------~g~~~~~~~~-~~~~p 52 (361)
T 3scy_A 13 ELTMLVGTYTSG-NSKGIYTFRFNE-------------------------------E-------TGESLPLSDA-EVANP 52 (361)
T ss_dssp EEEEEEEECCSS-SCCEEEEEEEET-------------------------------T-------TCCEEEEEEE-ECSCC
T ss_pred ceEEEEEeccCC-CCCCEEEEEEeC-------------------------------C-------CCCEEEeecc-cCCCC
Confidence 578899999875 567899999831 0 0111222333 77888
Q ss_pred eEEEEcCCCCcEEEEEeCC----CcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCe
Q 018322 169 NRIRAMTQNPHICASWADT----GHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGR 244 (358)
Q Consensus 169 ~~i~~~p~~~~~lat~s~d----g~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~ 244 (358)
..++|+|++ .+|++++.+ +.|.+|++...... ...+.....+......+++ ++. +
T Consensus 53 ~~l~~spdg-~~l~~~~~~~~~~~~v~~~~~~~~~g~-----------------~~~~~~~~~~~~~p~~~~~--dg~-~ 111 (361)
T 3scy_A 53 SYLIPSADG-KFVYSVNEFSKDQAAVSAFAFDKEKGT-----------------LHLLNTQKTMGADPCYLTT--NGK-N 111 (361)
T ss_dssp CSEEECTTS-SEEEEEECCSSTTCEEEEEEEETTTTE-----------------EEEEEEEECSSSCEEEEEE--CSS-E
T ss_pred ceEEECCCC-CEEEEEEccCCCCCcEEEEEEeCCCCc-----------------EEEeeEeccCCCCcEEEEE--CCC-E
Confidence 999999999 566666665 79999998752100 1223334445556777888 665 6
Q ss_pred EEEEe-CCCcEEEEecCCCCCcccCCCc----------cccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCC--
Q 018322 245 LVTGD-CNSCIYLWEPASDATWNVDPNP----------FIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKS-- 311 (358)
Q Consensus 245 l~sgs-~dg~I~lwd~~~~~~~~~~~~~----------~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~-- 311 (358)
|++++ .++.|.+|++...+........ ...+...+.+++|+|+++.+++++..++.|++|++.....
T Consensus 112 l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~ 191 (361)
T 3scy_A 112 IVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANAD 191 (361)
T ss_dssp EEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTT
T ss_pred EEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcc
Confidence 66655 6889999999764432111000 1112344688999999985566666689999999876432
Q ss_pred ----e------eEEEecCCCCeEEEEEeCCCCcEEEEEe-CCCCEEEEeCCCC
Q 018322 312 ----A------LTSFKAHNADVNVISWNRLASCLLASGS-DDGTFSIHDLRLL 353 (358)
Q Consensus 312 ----~------~~~~~~h~~~V~~i~~~p~~~~~lasgs-~Dg~i~iwDlr~~ 353 (358)
. ......+...+..++|+|++ .+|++++ .++.|.+||+.+.
T Consensus 192 ~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg-~~l~v~~~~~~~v~v~~~~~g 243 (361)
T 3scy_A 192 NKEKFLTKGTPEAFKVAPGSGPRHLIFNSDG-KFAYLINEIGGTVIAFRYADG 243 (361)
T ss_dssp TCCCCEEEEEEEEEECCTTCCEEEEEECTTS-SEEEEEETTTCEEEEEEEETT
T ss_pred cccceeecccccceecCCCCCCeEEEEcCCC-CEEEEEcCCCCeEEEEEecCC
Confidence 1 11123445668899999999 6555555 6899999998754
No 150
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.49 E-value=6.8e-13 Score=133.71 Aligned_cols=177 Identities=10% Similarity=0.081 Sum_probs=116.5
Q ss_pred EEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCC-----CccccccccccccCCCCCCCCCCCcEEEcCCCCCeEE
Q 018322 160 RKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRS-----HLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYA 234 (358)
Q Consensus 160 ~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 234 (358)
.+..|.+.+..++|+|++ ..||++ .++.|++|++.. ......... .........+ ....+...+.+
T Consensus 115 ~l~~~~~~~~~~~~SpdG-~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~-----~~~~~~~g~~--~~~ee~~~~~~ 185 (706)
T 2z3z_A 115 YLFDTNEETASLDFSPVG-DRVAYV-RNHNLYIARGGKLGEGMSRAIAVTID-----GTETLVYGQA--VHQREFGIEKG 185 (706)
T ss_dssp EEECCTTCCTTCEECTTS-SEEEEE-ETTEEEEEECBCTTSCCCCCEESCSC-----CBTTEEESSC--CGGGCTTCCCS
T ss_pred EccCCcccccCCcCCCCC-CEEEEE-ECCeEEEEecCcccccCCCcEEeccC-----CCCCeEcccc--hhhhhcCCCce
Confidence 345677889999999999 567774 679999999875 211000000 0000000000 01111223579
Q ss_pred EEeCCCCCCeEEEEe---------------------------------CCCcEEEEecCCCCCcccCCCccccCCCcEEE
Q 018322 235 IDWNPITTGRLVTGD---------------------------------CNSCIYLWEPASDATWNVDPNPFIGHSASVED 281 (358)
Q Consensus 235 l~~s~~~~~~l~sgs---------------------------------~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~ 281 (358)
++|+|++. +|++++ .+..|++||+.++.... ......|...+.+
T Consensus 186 ~~~SpDg~-~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~--~~~~~~~~~~~~~ 262 (706)
T 2z3z_A 186 TFWSPKGS-CLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVY--LQTGEPKEKFLTN 262 (706)
T ss_dssp EEECTTSS-EEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEE--CCCCSCTTCEEEE
T ss_pred EEECCCCC-EEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEe--eccCCCCceeEee
Confidence 99999998 888887 45689999997633211 1112346778999
Q ss_pred EEECCCCCCEEEEEECCC-----cEEEEECCCCCCeeEEE--ecCCC---CeEEEEEeC--CCCcEEEEEeCCCCEEEEe
Q 018322 282 LQWSPTEPDVFASCSVDG-----HIAIWDTRVGKSALTSF--KAHNA---DVNVISWNR--LASCLLASGSDDGTFSIHD 349 (358)
Q Consensus 282 v~~sp~~~~~las~s~Dg-----~I~iwD~r~~~~~~~~~--~~h~~---~V~~i~~~p--~~~~~lasgs~Dg~i~iwD 349 (358)
++|+|++. .|++++.++ .|++||+.++. ....+ ..+.. .++.++|+| ++ .+|++++.+|.++||+
T Consensus 263 ~~~spdg~-~l~~~~~~~~~~~~~v~~~d~~~g~-~~~~~~~~~~~~~~~~~~~~~~sp~~dg-~~l~~~~~~g~~~l~~ 339 (706)
T 2z3z_A 263 LSWSPDEN-ILYVAEVNRAQNECKVNAYDAETGR-FVRTLFVETDKHYVEPLHPLTFLPGSNN-QFIWQSRRDGWNHLYL 339 (706)
T ss_dssp EEECTTSS-EEEEEEECTTSCEEEEEEEETTTCC-EEEEEEEEECSSCCCCCSCCEECTTCSS-EEEEEECTTSSCEEEE
T ss_pred EEEECCCC-EEEEEEeCCCCCeeEEEEEECCCCc-eeeEEEEccCCCeECccCCceeecCCCC-EEEEEEccCCccEEEE
Confidence 99999998 788777765 99999999852 22222 22222 246789999 99 7999999999999998
Q ss_pred CC
Q 018322 350 LR 351 (358)
Q Consensus 350 lr 351 (358)
+.
T Consensus 340 ~~ 341 (706)
T 2z3z_A 340 YD 341 (706)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 151
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.49 E-value=2.2e-12 Score=117.12 Aligned_cols=113 Identities=11% Similarity=0.104 Sum_probs=82.1
Q ss_pred ceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcC-C----CCCeEEEEeCCCC
Q 018322 167 CVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGG-H----KDEGYAIDWNPIT 241 (358)
Q Consensus 167 ~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h----~~~v~~l~~s~~~ 241 (358)
.+..+.|+|++..++++++.++.|.+||+.. .+.+..+.. + ...+.+++|+|++
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~s~dg 93 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVT---------------------GETLGRIDLSTPEERVKSLFGAALSPDG 93 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTT---------------------CCEEEEEECCBTTEEEECTTCEEECTTS
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCC---------------------CCeEeeEEcCCcccccccccceEECCCC
Confidence 5889999999966778888889999999976 233333332 1 1256789999999
Q ss_pred CCeEEEEe------------CCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCC
Q 018322 242 TGRLVTGD------------CNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVG 309 (358)
Q Consensus 242 ~~~l~sgs------------~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~ 309 (358)
. +|++++ .++.|.+||+.+. ... ..+. ....+.+++|+|++. .++++ ++.|++||+.++
T Consensus 94 ~-~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~-~~~---~~~~-~~~~~~~~~~s~dg~-~l~~~--~~~i~~~d~~~~ 164 (337)
T 1pby_B 94 K-TLAIYESPVRLELTHFEVQPTRVALYDAETL-SRR---KAFE-APRQITMLAWARDGS-KLYGL--GRDLHVMDPEAG 164 (337)
T ss_dssp S-EEEEEEEEEEECSSCEEECCCEEEEEETTTT-EEE---EEEE-CCSSCCCEEECTTSS-CEEEE--SSSEEEEETTTT
T ss_pred C-EEEEEecccccccccccccCceEEEEECCCC-cEE---EEEe-CCCCcceeEECCCCC-EEEEe--CCeEEEEECCCC
Confidence 8 888775 5799999999763 221 2222 234578899999998 45555 689999998763
No 152
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.47 E-value=3.5e-13 Score=136.16 Aligned_cols=156 Identities=17% Similarity=0.214 Sum_probs=108.0
Q ss_pred ceeEEEEcCCCCcEEEEEeC---------CCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEe
Q 018322 167 CVNRIRAMTQNPHICASWAD---------TGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDW 237 (358)
Q Consensus 167 ~V~~i~~~p~~~~~lat~s~---------dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 237 (358)
.|.+++|+|++ +.||+++. ++.|++||+...... .... + ...+.+++|
T Consensus 61 ~~~~~~~SpDg-~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~----------------~~~~---l---~~~~~~~~~ 117 (719)
T 1z68_A 61 NASNYGLSPDR-QFVYLESDYSKLWRYSYTATYYIYDLSNGEFV----------------RGNE---L---PRPIQYLCW 117 (719)
T ss_dssp TCSEEEECTTS-SEEEEEEEEEECSSSCEEEEEEEEETTTTEEC----------------CSSC---C---CSSBCCEEE
T ss_pred ceeeEEECCCC-CeEEEEecCceeEEeecceEEEEEECCCCccc----------------ccee---c---CcccccceE
Confidence 49999999999 67777765 789999999762110 0011 1 245788999
Q ss_pred CCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcE-----------------EEEEECCCCCCEEEEEECCC-
Q 018322 238 NPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASV-----------------EDLQWSPTEPDVFASCSVDG- 299 (358)
Q Consensus 238 s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V-----------------~~v~~sp~~~~~las~s~Dg- 299 (358)
||+|. +||.+. ++.|++|++.++.... ....++...| .+++|||+++ .||+++.|.
T Consensus 118 SPDG~-~la~~~-~~~i~~~~~~~g~~~~---l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~-~la~~~~d~~ 191 (719)
T 1z68_A 118 SPVGS-KLAYVY-QNNIYLKQRPGDPPFQ---ITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGK-FLAYAEFNDT 191 (719)
T ss_dssp CSSTT-CEEEEE-TTEEEEESSTTSCCEE---CCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSS-EEEEEEEECT
T ss_pred CCCCC-EEEEEE-CCeEEEEeCCCCCcEE---EecCCCcCCeEcccccceeeeecccCcccEEECCCCC-EEEEEEECCC
Confidence 99998 888886 7899999997643211 1112222222 4899999999 888877552
Q ss_pred ---------------------------------cEEEEECCCCCCee--EE------EecCCCCeEEEEEeCCCCcEEEE
Q 018322 300 ---------------------------------HIAIWDTRVGKSAL--TS------FKAHNADVNVISWNRLASCLLAS 338 (358)
Q Consensus 300 ---------------------------------~I~iwD~r~~~~~~--~~------~~~h~~~V~~i~~~p~~~~~las 338 (358)
.|++||+.++. .. .. +..|...+..++|+|++ .++++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~SpD~-~~~~~ 269 (719)
T 1z68_A 192 DIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPA-YVGPQEVPVPAMIASSDYYFSWLTWVTDE-RVCLQ 269 (719)
T ss_dssp TSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHH-HHCCEECCCCHHHHTSCEEEEEEEESSSS-EEEEE
T ss_pred CCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCC-ccceeEccCCccCCCCcceEEEeEEeCCC-eEEEE
Confidence 78899998743 21 12 23577789999999997 78877
Q ss_pred EeCCC----CEEEEe----CCCC
Q 018322 339 GSDDG----TFSIHD----LRLL 353 (358)
Q Consensus 339 gs~Dg----~i~iwD----lr~~ 353 (358)
....+ .|.+|| +.++
T Consensus 270 ~~~~~~~~~~l~~~d~~~~~~~g 292 (719)
T 1z68_A 270 WLKRVQNVSVLSICDFREDWQTW 292 (719)
T ss_dssp EEESSTTEEEEEEEEECSSSSSE
T ss_pred EeccccCeEEEEEEcccCCCCCC
Confidence 54332 488899 6554
No 153
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.46 E-value=7.9e-13 Score=139.35 Aligned_cols=157 Identities=10% Similarity=0.016 Sum_probs=124.6
Q ss_pred CCCceeEEEEc-CCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCC-CeEEEEeCCCC
Q 018322 164 HQGCVNRIRAM-TQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKD-EGYAIDWNPIT 241 (358)
Q Consensus 164 H~~~V~~i~~~-p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~l~~s~~~ 241 (358)
|.+.|..+.|+ |++ ..||+++ ++.|++|++.. .....+..|.. .+.+++|+ ++
T Consensus 294 ~~~~v~~~~~S~pdG-~~la~~~-~~~i~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~s-dg 348 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDG-DLIAFVS-RGQAFIQDVSG----------------------TYVLKVPEPLRIRYVRRGGD-TK 348 (1045)
T ss_dssp ECGGGGEEEEEECGG-GCEEEEE-TTEEEEECTTS----------------------SBEEECSCCSCEEEEEECSS-SE
T ss_pred cccccceeeecCCCC-CEEEEEE-cCEEEEEcCCC----------------------CceEEccCCCcceEEeeeEc-CC
Confidence 45579999999 999 5666666 78999999875 22334566777 89999999 88
Q ss_pred CCeEEEEeCCCcEE-EEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEecCC
Q 018322 242 TGRLVTGDCNSCIY-LWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHN 320 (358)
Q Consensus 242 ~~~l~sgs~dg~I~-lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~ 320 (358)
. .|++++.++.|. +|++... .. ..+.+|...+..++|+|++. .|++++.++.|++||+.++ ........|.
T Consensus 349 ~-~l~~~s~~~~l~~~~d~~~~-~~----~~l~~~~~~~~~~~~SpDG~-~la~~~~~~~v~~~d~~tg-~~~~~~~~~~ 420 (1045)
T 1k32_A 349 V-AFIHGTREGDFLGIYDYRTG-KA----EKFEENLGNVFAMGVDRNGK-FAVVANDRFEIMTVDLETG-KPTVIERSRE 420 (1045)
T ss_dssp E-EEEEEETTEEEEEEEETTTC-CE----EECCCCCCSEEEEEECTTSS-EEEEEETTSEEEEEETTTC-CEEEEEECSS
T ss_pred C-eEEEEECCCceEEEEECCCC-Cc----eEecCCccceeeeEECCCCC-EEEEECCCCeEEEEECCCC-ceEEeccCCC
Confidence 7 888888888888 8898653 22 22337788999999999999 9999999999999999885 3444455788
Q ss_pred CCeEEEEEeCCCCcEEEEEeCCC----------CEEEEeCCCCC
Q 018322 321 ADVNVISWNRLASCLLASGSDDG----------TFSIHDLRLLK 354 (358)
Q Consensus 321 ~~V~~i~~~p~~~~~lasgs~Dg----------~i~iwDlr~~~ 354 (358)
..+..++|+|++ .+|++++.++ .|++||+.+.+
T Consensus 421 ~~v~~~~~SpDG-~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 421 AMITDFTISDNS-RFIAYGFPLKHGETDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp SCCCCEEECTTS-CEEEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred CCccceEECCCC-CeEEEEecCccccccCCCCCeEEEEECCCCc
Confidence 899999999999 7777776543 89999998754
No 154
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.45 E-value=1.2e-12 Score=132.00 Aligned_cols=162 Identities=11% Similarity=0.136 Sum_probs=114.6
Q ss_pred CceeEEEEcCCCCcEEEEEe---------------------------------CCCcEEEEeCCCCccccccccccccCC
Q 018322 166 GCVNRIRAMTQNPHICASWA---------------------------------DTGHVQVWDLRSHLNALAESETIVGQG 212 (358)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s---------------------------------~dg~V~iwd~~~~~~~~~~~~~~~~~~ 212 (358)
+.+.++.|+|++ ..||+++ .+..|++||+...
T Consensus 181 ~~~~~~~~SpDg-~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~-------------- 245 (706)
T 2z3z_A 181 GIEKGTFWSPKG-SCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATG-------------- 245 (706)
T ss_dssp TCCCSEEECTTS-SEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTT--------------
T ss_pred CCCceEEECCCC-CEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCC--------------
Confidence 346899999999 6777776 4467999998762
Q ss_pred CCCCCCCCCcEEE--cCCCCCeEEEEeCCCCCCeEEEEeCCC-----cEEEEecCCCCCcccCCCccc-cCC---CcEEE
Q 018322 213 APQVSNQSPLVKF--GGHKDEGYAIDWNPITTGRLVTGDCNS-----CIYLWEPASDATWNVDPNPFI-GHS---ASVED 281 (358)
Q Consensus 213 ~~~~~~~~~~~~~--~~h~~~v~~l~~s~~~~~~l~sgs~dg-----~I~lwd~~~~~~~~~~~~~~~-~h~---~~V~~ 281 (358)
...... ..|...+.+++|+|++. +|++++.++ .|++||+.++.... .... .+. ..+.+
T Consensus 246 -------~~~~~~~~~~~~~~~~~~~~spdg~-~l~~~~~~~~~~~~~v~~~d~~~g~~~~---~~~~~~~~~~~~~~~~ 314 (706)
T 2z3z_A 246 -------KTVYLQTGEPKEKFLTNLSWSPDEN-ILYVAEVNRAQNECKVNAYDAETGRFVR---TLFVETDKHYVEPLHP 314 (706)
T ss_dssp -------EEEECCCCSCTTCEEEEEEECTTSS-EEEEEEECTTSCEEEEEEEETTTCCEEE---EEEEEECSSCCCCCSC
T ss_pred -------ceEeeccCCCCceeEeeEEEECCCC-EEEEEEeCCCCCeeEEEEEECCCCceee---EEEEccCCCeECccCC
Confidence 111111 24667789999999998 888877665 99999997742221 1111 122 23467
Q ss_pred EEECC--CCCCEEEEEECCCcEEEEECCCCCCeeEEEecCCCCeEE-EEEeCCCCcEEEEEeCCC----CEEEEeCCCCC
Q 018322 282 LQWSP--TEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNV-ISWNRLASCLLASGSDDG----TFSIHDLRLLK 354 (358)
Q Consensus 282 v~~sp--~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~-i~~~p~~~~~lasgs~Dg----~i~iwDlr~~~ 354 (358)
++|+| ++. ++++++.++.++||.+......+..+..|...+.. ++|+|++..++++++.++ .|..||+.+.+
T Consensus 315 ~~~sp~~dg~-~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~ 393 (706)
T 2z3z_A 315 LTFLPGSNNQ-FIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK 393 (706)
T ss_dssp CEECTTCSSE-EEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC
T ss_pred ceeecCCCCE-EEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC
Confidence 89999 998 88999999999999886333466677777777876 799999945556666655 67777776654
No 155
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.45 E-value=3.8e-12 Score=125.54 Aligned_cols=202 Identities=9% Similarity=-0.030 Sum_probs=136.7
Q ss_pred cccCcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCCCCCCCCCCCCCCCCCCC
Q 018322 64 HIGWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKPSNDDEDVDSESSDSDED 143 (358)
Q Consensus 64 ~~~wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (358)
....|+.++.+.||+ .+|+.+... ++.+.||.+.
T Consensus 19 ~~~~~~~~~~~~~DG-----------~~la~~s~~----~g~~~lw~~~------------------------------- 52 (582)
T 3o4h_A 19 LIAVEKYSLQGVVDG-----------DKLLVVGFS----EGSVNAYLYD------------------------------- 52 (582)
T ss_dssp HHHSCEEEEEEEETT-----------TEEEEEEEE----TTEEEEEEEE-------------------------------
T ss_pred HhccchheeecCCCC-----------CeEEEEEcc----CCceeEEEEc-------------------------------
Confidence 346789999999996 356655532 3478888762
Q ss_pred CCCccCCCCCCCeEEEEEecCC-CceeEEEEcCCCCcEEEEEeC---CCcEEEEeCCCCccccccccccccCCCCCCCCC
Q 018322 144 SDDDEEGGSGTPILQLRKVAHQ-GCVNRIRAMTQNPHICASWAD---TGHVQVWDLRSHLNALAESETIVGQGAPQVSNQ 219 (358)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~H~-~~V~~i~~~p~~~~~lat~s~---dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (358)
.... .++..|. ..|..+.|+|+ .++++++. +...+||.+.... ..
T Consensus 53 ----------~g~~-~~lt~~~~~~~~~~~~spd--~~l~~~~~~~g~~~~~l~~~~~~~------------------~g 101 (582)
T 3o4h_A 53 ----------GGET-VKLNREPINSVLDPHYGVG--RVILVRDVSKGAEQHALFKVNTSR------------------PG 101 (582)
T ss_dssp ----------TTEE-EECCSSCCSEECEECTTCS--EEEEEEECSTTSCCEEEEEEETTS------------------TT
T ss_pred ----------CCCc-EeeecccccccccccCCCC--eEEEEeccCCCCcceEEEEEeccC------------------CC
Confidence 1111 2334555 68999999997 57777765 4555666553300 01
Q ss_pred CCcEEEcCCCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECC-
Q 018322 220 SPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVD- 298 (358)
Q Consensus 220 ~~~~~~~~h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~D- 298 (358)
... .+..+. ....++|+|++.+.+++.+.++.+.+||+.++ .. ..+..+.. .+++|+|+|+ .+++++.+
T Consensus 102 ~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g-~~----~~l~~~~~--~~~~~spDG~-~la~~~~~~ 171 (582)
T 3o4h_A 102 EEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGG-GL----RELARLPG--FGFVSDIRGD-LIAGLGFFG 171 (582)
T ss_dssp CCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETT-EE----EEEEEESS--CEEEEEEETT-EEEEEEEEE
T ss_pred ccc-cccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCC-cE----EEeecCCC--ceEEECCCCC-EEEEEEEcC
Confidence 111 222222 33466888888765555555556669999763 22 22333333 7899999999 88877777
Q ss_pred ---CcEEEEECCCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCC--CEEEEeCCCCCC
Q 018322 299 ---GHIAIWDTRVGKSALTSFKAHNADVNVISWNRLASCLLASGSDDG--TFSIHDLRLLKV 355 (358)
Q Consensus 299 ---g~I~iwD~r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg--~i~iwDlr~~~~ 355 (358)
+.|++||+.++. ...+..|...++.++|+|+| ..|++++.++ .|++||+.+.+.
T Consensus 172 ~~~~~i~~~d~~~g~--~~~l~~~~~~~~~~~~SpDG-~~l~~~~~~~~~~i~~~d~~~~~~ 230 (582)
T 3o4h_A 172 GGRVSLFTSNLSSGG--LRVFDSGEGSFSSASISPGM-KVTAGLETAREARLVTVDPRDGSV 230 (582)
T ss_dssp TTEEEEEEEETTTCC--CEEECCSSCEEEEEEECTTS-CEEEEEECSSCEEEEEECTTTCCE
T ss_pred CCCeEEEEEcCCCCC--ceEeecCCCccccceECCCC-CEEEEccCCCeeEEEEEcCCCCcE
Confidence 789999998753 44677888889999999999 8888888888 899999987653
No 156
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.44 E-value=1.2e-11 Score=114.20 Aligned_cols=168 Identities=11% Similarity=0.067 Sum_probs=109.2
Q ss_pred CceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCcc----c-cccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCC
Q 018322 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLN----A-LAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPI 240 (358)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~ 240 (358)
..+.++.|+|++..++++...++.|++|++..... . +... .........+.....+++|+|+
T Consensus 155 ~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~-------------~~~~~~~~~~~~~~~~~~~spd 221 (361)
T 3scy_A 155 PHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTK-------------GTPEAFKVAPGSGPRHLIFNSD 221 (361)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEE-------------EEEEEEECCTTCCEEEEEECTT
T ss_pred CcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeec-------------ccccceecCCCCCCeEEEEcCC
Confidence 34688999999955667776789999999876210 0 0000 0001112233456789999999
Q ss_pred CCCeEEEEe-CCCcEEEEecCCCCCcc--cCCCccccCCCcEEEEEECCCCCCEEEEEEC-CCcEEEEECCC--CCC-ee
Q 018322 241 TTGRLVTGD-CNSCIYLWEPASDATWN--VDPNPFIGHSASVEDLQWSPTEPDVFASCSV-DGHIAIWDTRV--GKS-AL 313 (358)
Q Consensus 241 ~~~~l~sgs-~dg~I~lwd~~~~~~~~--~~~~~~~~h~~~V~~v~~sp~~~~~las~s~-Dg~I~iwD~r~--~~~-~~ 313 (358)
+. +|++++ .++.|.+|++.+ +... ........+...+.+++|+|+++.++++... ++.|.+|++.. +.. .+
T Consensus 222 g~-~l~v~~~~~~~v~v~~~~~-g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~ 299 (361)
T 3scy_A 222 GK-FAYLINEIGGTVIAFRYAD-GMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKV 299 (361)
T ss_dssp SS-EEEEEETTTCEEEEEEEET-TEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEE
T ss_pred CC-EEEEEcCCCCeEEEEEecC-CceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEe
Confidence 98 776666 689999999975 3211 0011222344567899999999944455555 68999999963 221 23
Q ss_pred EEEecCCCCeEEEEEeCCCCcEEEEEe-CCCCEEEEeC
Q 018322 314 TSFKAHNADVNVISWNRLASCLLASGS-DDGTFSIHDL 350 (358)
Q Consensus 314 ~~~~~h~~~V~~i~~~p~~~~~lasgs-~Dg~i~iwDl 350 (358)
..+.. ...+..++|+|++ .+|++++ .++.|.+|.+
T Consensus 300 ~~~~~-g~~~~~~~~spdg-~~l~~~~~~~~~v~v~~~ 335 (361)
T 3scy_A 300 GYQLT-GIHPRNFIITPNG-KYLLVACRDTNVIQIFER 335 (361)
T ss_dssp EEEEC-SSCCCEEEECTTS-CEEEEEETTTTEEEEEEE
T ss_pred eEecC-CCCCceEEECCCC-CEEEEEECCCCCEEEEEE
Confidence 33333 5578899999999 6666665 6789999644
No 157
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.43 E-value=9.7e-12 Score=113.47 Aligned_cols=115 Identities=10% Similarity=0.032 Sum_probs=81.4
Q ss_pred ceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcC-C-----CCCeEEEEeCCC
Q 018322 167 CVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGG-H-----KDEGYAIDWNPI 240 (358)
Q Consensus 167 ~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h-----~~~v~~l~~s~~ 240 (358)
.+..+.|+|++..++++...++.|.+||+.. .+.+..+.. + ...+.+++|+|+
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t---------------------~~~~~~~~~~~~~~~~~~~~~~~~~spd 102 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDT---------------------CKNTFHANLSSVPGEVGRSMYSFAISPD 102 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTT---------------------TEEEEEEESCCSTTEEEECSSCEEECTT
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCC---------------------CcEEEEEEcccccccccccccceEECCC
Confidence 6889999999955667777889999999976 233333332 2 123678999999
Q ss_pred CCCeEEEEeCC------------CcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCC
Q 018322 241 TTGRLVTGDCN------------SCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRV 308 (358)
Q Consensus 241 ~~~~l~sgs~d------------g~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~ 308 (358)
+. +|++++.+ +.|.+||+.++. .......+ .+...+.+++|+|++. +++ + ++.|++||+.+
T Consensus 103 g~-~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~-~~~~~~~~-~~~~~~~~~~~s~dg~-l~~-~--~~~i~~~d~~~ 175 (349)
T 1jmx_B 103 GK-EVYATVNPTQRLNDHYVVKPPRLEVFSTADGL-EAKPVRTF-PMPRQVYLMRAADDGS-LYV-A--GPDIYKMDVKT 175 (349)
T ss_dssp SS-EEEEEEEEEEECSSCEEECCCEEEEEEGGGGG-GBCCSEEE-ECCSSCCCEEECTTSC-EEE-E--SSSEEEECTTT
T ss_pred CC-EEEEEcccccccccccccCCCeEEEEECCCcc-ccceeeec-cCCCcccceeECCCCc-EEE-c--cCcEEEEeCCC
Confidence 98 88888755 899999997632 11111122 2344688999999998 666 3 34499999987
Q ss_pred C
Q 018322 309 G 309 (358)
Q Consensus 309 ~ 309 (358)
+
T Consensus 176 ~ 176 (349)
T 1jmx_B 176 G 176 (349)
T ss_dssp C
T ss_pred C
Confidence 5
No 158
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.43 E-value=1.5e-11 Score=112.18 Aligned_cols=158 Identities=10% Similarity=0.061 Sum_probs=105.9
Q ss_pred ceeEEEEcCCCCcEEEEEeCC------------CcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEE
Q 018322 167 CVNRIRAMTQNPHICASWADT------------GHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYA 234 (358)
Q Consensus 167 ~V~~i~~~p~~~~~lat~s~d------------g~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 234 (358)
.+..+.|+|++ .++++++.+ +.|.+||+..... ...+..+..+ ..+.+
T Consensus 93 ~~~~~~~spdg-~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~------------------~~~~~~~~~~-~~~~~ 152 (349)
T 1jmx_B 93 SMYSFAISPDG-KEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLE------------------AKPVRTFPMP-RQVYL 152 (349)
T ss_dssp CSSCEEECTTS-SEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGG------------------BCCSEEEECC-SSCCC
T ss_pred cccceEECCCC-CEEEEEcccccccccccccCCCeEEEEECCCccc------------------cceeeeccCC-Ccccc
Confidence 47899999999 566666644 8999999875210 1233334333 36889
Q ss_pred EEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCcc------------------------------------------
Q 018322 235 IDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPF------------------------------------------ 272 (358)
Q Consensus 235 l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~------------------------------------------ 272 (358)
++|+|++. +++ ++ +.|.+||+.++..........
T Consensus 153 ~~~s~dg~-l~~-~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 228 (349)
T 1jmx_B 153 MRAADDGS-LYV-AG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPAT 228 (349)
T ss_dssp EEECTTSC-EEE-ES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CC
T ss_pred eeECCCCc-EEE-cc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccc
Confidence 99999997 555 43 349999987643211000000
Q ss_pred ----------------------ccCCCcEEEEEECC-CCCCEEEEEECCCcEEEEECCCCCCeeEEEecCCCCeEEEEEe
Q 018322 273 ----------------------IGHSASVEDLQWSP-TEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWN 329 (358)
Q Consensus 273 ----------------------~~h~~~V~~v~~sp-~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~~ 329 (358)
..+...+.+++|+| ++. .++++ ++.|.+||+.++ ..+..+. ....+.+++|+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~-~l~~~--~~~v~~~d~~~~-~~~~~~~-~~~~~~~~~~s 303 (349)
T 1jmx_B 229 ADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPN-QIYGV--LNRLAKYDLKQR-KLIKAAN-LDHTYYCVAFD 303 (349)
T ss_dssp CEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTT-EEEEE--ESEEEEEETTTT-EEEEEEE-CSSCCCEEEEC
T ss_pred cccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCC-EEEEE--cCeEEEEECccC-eEEEEEc-CCCCccceEEC
Confidence 00112456788899 888 66666 889999999884 3444444 33457899999
Q ss_pred CCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 330 RLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 330 p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
|++ .+|++++.++.|.+||+++++
T Consensus 304 ~dg-~~l~~~~~~~~v~v~d~~~~~ 327 (349)
T 1jmx_B 304 KKG-DKLYLGGTFNDLAVFNPDTLE 327 (349)
T ss_dssp SSS-SCEEEESBSSEEEEEETTTTE
T ss_pred CCC-CEEEEecCCCeEEEEeccccc
Confidence 999 666667888999999998764
No 159
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.42 E-value=7.8e-13 Score=130.45 Aligned_cols=150 Identities=11% Similarity=0.038 Sum_probs=114.3
Q ss_pred ceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCeEE
Q 018322 167 CVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLV 246 (358)
Q Consensus 167 ~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~l~ 246 (358)
.+....|+|++..++++.+.++.+.|||+.. ........ +.. .+++|+|+|. +|+
T Consensus 111 ~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~---------------------g~~~~l~~-~~~--~~~~~spDG~-~la 165 (582)
T 3o4h_A 111 PMRILSGVDTGEAVVFTGATEDRVALYALDG---------------------GGLRELAR-LPG--FGFVSDIRGD-LIA 165 (582)
T ss_dssp SBEEEEEEECSSCEEEEEECSSCEEEEEEET---------------------TEEEEEEE-ESS--CEEEEEEETT-EEE
T ss_pred CceeeeeCCCCCeEEEEecCCCCceEEEccC---------------------CcEEEeec-CCC--ceEEECCCCC-EEE
Confidence 3446688888755555555555666999865 22222222 222 7899999998 898
Q ss_pred EEeCC----CcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCC--cEEEEECCCCCCeeEEEecCC
Q 018322 247 TGDCN----SCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDG--HIAIWDTRVGKSALTSFKAHN 320 (358)
Q Consensus 247 sgs~d----g~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg--~I~iwD~r~~~~~~~~~~~h~ 320 (358)
+++.+ +.|++||+.++.. ..+..|...+..++|+|+++ .|+++..++ .|++||+.++. .. .+..|.
T Consensus 166 ~~~~~~~~~~~i~~~d~~~g~~-----~~l~~~~~~~~~~~~SpDG~-~l~~~~~~~~~~i~~~d~~~~~-~~-~~~~~~ 237 (582)
T 3o4h_A 166 GLGFFGGGRVSLFTSNLSSGGL-----RVFDSGEGSFSSASISPGMK-VTAGLETAREARLVTVDPRDGS-VE-DLELPS 237 (582)
T ss_dssp EEEEEETTEEEEEEEETTTCCC-----EEECCSSCEEEEEEECTTSC-EEEEEECSSCEEEEEECTTTCC-EE-ECCCSC
T ss_pred EEEEcCCCCeEEEEEcCCCCCc-----eEeecCCCccccceECCCCC-EEEEccCCCeeEEEEEcCCCCc-EE-EccCCC
Confidence 77766 7899999876432 35677888899999999999 788888888 89999998753 44 566777
Q ss_pred CCeEEEE--------EeCCCCcEEEEEeCCCCEEEEeC
Q 018322 321 ADVNVIS--------WNRLASCLLASGSDDGTFSIHDL 350 (358)
Q Consensus 321 ~~V~~i~--------~~p~~~~~lasgs~Dg~i~iwDl 350 (358)
..+..++ |+|++ .++++++.+|+++||++
T Consensus 238 ~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 238 KDFSSYRPTAITWLGYLPDG-RLAVVARREGRSAVFID 274 (582)
T ss_dssp SHHHHHCCSEEEEEEECTTS-CEEEEEEETTEEEEEET
T ss_pred cChhhhhhccccceeEcCCC-cEEEEEEcCCcEEEEEE
Confidence 7777777 99999 99999999999999998
No 160
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.38 E-value=1.2e-12 Score=132.35 Aligned_cols=141 Identities=9% Similarity=0.170 Sum_probs=99.7
Q ss_pred EEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCC---CeEEEEeCCCCCCeEE
Q 018322 170 RIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKD---EGYAIDWNPITTGRLV 246 (358)
Q Consensus 170 ~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~l~~s~~~~~~l~ 246 (358)
.++|+|++ .++++ +.+++|++||+.. ..+...+.+|.. .+.+++|||++. +|+
T Consensus 20 ~~~~s~dg-~~~~~-~~d~~i~~~~~~~---------------------g~~~~~~~~~~~~~~~~~~~~~SpDg~-~la 75 (719)
T 1z68_A 20 FPNWISGQ-EYLHQ-SADNNIVLYNIET---------------------GQSYTILSNRTMKSVNASNYGLSPDRQ-FVY 75 (719)
T ss_dssp CCEESSSS-EEEEE-CTTSCEEEEESSS---------------------CCEEEEECHHHHHTTTCSEEEECTTSS-EEE
T ss_pred ccEECCCC-eEEEE-cCCCCEEEEEcCC---------------------CcEEEEEccccccccceeeEEECCCCC-eEE
Confidence 67899999 56655 4699999999987 344444544432 388999999998 888
Q ss_pred EEeC---------CCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEe
Q 018322 247 TGDC---------NSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFK 317 (358)
Q Consensus 247 sgs~---------dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~ 317 (358)
+++. ++.|++||+.++ .... ...+ ...+.+++|||+|+ .||++. ++.|++||+.++........
T Consensus 76 ~~~~~~~~~~~s~~~~i~~~d~~~g-~~~~-~~~l---~~~~~~~~~SPDG~-~la~~~-~~~i~~~~~~~g~~~~l~~~ 148 (719)
T 1z68_A 76 LESDYSKLWRYSYTATYYIYDLSNG-EFVR-GNEL---PRPIQYLCWSPVGS-KLAYVY-QNNIYLKQRPGDPPFQITFN 148 (719)
T ss_dssp EEEEEEECSSSCEEEEEEEEETTTT-EECC-SSCC---CSSBCCEEECSSTT-CEEEEE-TTEEEEESSTTSCCEECCCC
T ss_pred EEecCceeEEeecceEEEEEECCCC-cccc-ceec---CcccccceECCCCC-EEEEEE-CCeEEEEeCCCCCcEEEecC
Confidence 8876 689999999763 2210 0112 24688899999999 777775 78999999987542211112
Q ss_pred cCCCCe-----------------EEEEEeCCCCcEEEEEeCC
Q 018322 318 AHNADV-----------------NVISWNRLASCLLASGSDD 342 (358)
Q Consensus 318 ~h~~~V-----------------~~i~~~p~~~~~lasgs~D 342 (358)
++...| .+++|+|+| ..||+++.|
T Consensus 149 ~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG-~~la~~~~d 189 (719)
T 1z68_A 149 GRENKIFNGIPDWVYEEEMLATKYALWWSPNG-KFLAYAEFN 189 (719)
T ss_dssp CBTTTEEESSCCHHHHHHTTCSSCCEEECTTS-SEEEEEEEE
T ss_pred CCcCCeEcccccceeeeecccCcccEEECCCC-CEEEEEEEC
Confidence 332222 489999999 888887755
No 161
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.37 E-value=3.5e-11 Score=122.22 Aligned_cols=156 Identities=13% Similarity=0.174 Sum_probs=107.3
Q ss_pred eEEEEcCCCCcEEEEEeCC---------CcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCC
Q 018322 169 NRIRAMTQNPHICASWADT---------GHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNP 239 (358)
Q Consensus 169 ~~i~~~p~~~~~lat~s~d---------g~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~ 239 (358)
+.+.|+|++ ..|+.++.+ +.+.|||+... + ...+..|...+...+|||
T Consensus 65 ~~~~~Spdg-~~l~~~~~~~~~~r~~~~~~~~~~d~~~~---------------------~-~~~l~~~~~~~~~~~~SP 121 (740)
T 4a5s_A 65 NDYSISPDG-QFILLEYNYVKQWRHSYTASYDIYDLNKR---------------------Q-LITEERIPNNTQWVTWSP 121 (740)
T ss_dssp CEEEECTTS-SEEEEEEEEEECSSSCEEEEEEEEETTTT---------------------E-ECCSSCCCTTEEEEEECS
T ss_pred cceEECCCC-CEEEEEECCeeeEEEccceEEEEEECCCC---------------------c-EEEcccCCCcceeeEECC
Confidence 458899999 677777765 56779999872 2 223456677899999999
Q ss_pred CCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCc-----------------EEEEEECCCCCCEEEEEECCC---
Q 018322 240 ITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSAS-----------------VEDLQWSPTEPDVFASCSVDG--- 299 (358)
Q Consensus 240 ~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~-----------------V~~v~~sp~~~~~las~s~Dg--- 299 (358)
+|. .||.+. ++.|++|++..+.... .+..++... ...+.|||+|. .||.++.|.
T Consensus 122 dG~-~la~~~-~~~i~~~~~~~~~~~~---lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~-~la~~~~d~~~v 195 (740)
T 4a5s_A 122 VGH-KLAYVW-NNDIYVKIEPNLPSYR---ITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGT-FLAYAQFNDTEV 195 (740)
T ss_dssp STT-CEEEEE-TTEEEEESSTTSCCEE---CCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSS-EEEEEEEECTTC
T ss_pred CCC-EEEEEE-CCeEEEEECCCCceEE---EcCCCCccceecCcccccccchhcCCCcceEECCCCC-EEEEEEEcccCC
Confidence 998 888886 7899999997643221 112222222 23589999999 777765332
Q ss_pred ---------------------------------cEEEEECCC---CCC-eeEEEe------cCCCCeEEEEEeCCCCcEE
Q 018322 300 ---------------------------------HIAIWDTRV---GKS-ALTSFK------AHNADVNVISWNRLASCLL 336 (358)
Q Consensus 300 ---------------------------------~I~iwD~r~---~~~-~~~~~~------~h~~~V~~i~~~p~~~~~l 336 (358)
.|++||+.+ +.. ....+. .|...+..++|+|++ .++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg-~~~ 274 (740)
T 4a5s_A 196 PLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQE-RIS 274 (740)
T ss_dssp CEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETT-EEE
T ss_pred ceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCC-eEE
Confidence 478888876 521 223343 277779999999999 665
Q ss_pred EEEeC----CCCEEEEeCCCCC
Q 018322 337 ASGSD----DGTFSIHDLRLLK 354 (358)
Q Consensus 337 asgs~----Dg~i~iwDlr~~~ 354 (358)
+.... +..|.+||+.+++
T Consensus 275 ~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 275 LQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp EEEEESSTTEEEEEEEEEETTT
T ss_pred EEEeCCCCCEEEEEEEECCCCc
Confidence 55432 3479999988765
No 162
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.35 E-value=3.2e-11 Score=111.94 Aligned_cols=163 Identities=7% Similarity=0.018 Sum_probs=108.0
Q ss_pred cCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCC-CCccccccccccccCCCCCCCCCCCcE--EEcCCCCCeEEEEeCC
Q 018322 163 AHQGCVNRIRAMTQNPHICASWADTGHVQVWDLR-SHLNALAESETIVGQGAPQVSNQSPLV--KFGGHKDEGYAIDWNP 239 (358)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~h~~~v~~l~~s~ 239 (358)
.....+..+.|+|++ .+|++++.+ .|.+|++. . ..... ....+. ...+++|+|
T Consensus 37 ~~~~~~~~~a~spdg-~~l~~~~~~-~v~~~~~~~~---------------------g~~~~~~~~~~~g-~~~~~~~sp 92 (365)
T 1jof_A 37 PQDEPISWMTFDHER-KNIYGAAMK-KWSSFAVKSP---------------------TEIVHEASHPIGG-HPRANDADT 92 (365)
T ss_dssp CTTCCCSEEEECTTS-SEEEEEEBT-EEEEEEEEET---------------------TEEEEEEEEECCS-SGGGGCTTS
T ss_pred CCCCCCcEEEECCCC-CEEEEEccc-eEEEEEECCC---------------------CCEEEeeEeecCC-CCccEEECC
Confidence 344578899999999 667777776 99999986 3 11111 111112 355689999
Q ss_pred CCCC-eEEEEe-------------CCCcEEEEecCCCCCcccCCCccc-cCCCcEEEEEECCCCCCEEEEEE-CCCcEEE
Q 018322 240 ITTG-RLVTGD-------------CNSCIYLWEPASDATWNVDPNPFI-GHSASVEDLQWSPTEPDVFASCS-VDGHIAI 303 (358)
Q Consensus 240 ~~~~-~l~sgs-------------~dg~I~lwd~~~~~~~~~~~~~~~-~h~~~V~~v~~sp~~~~~las~s-~Dg~I~i 303 (358)
++.. ++++++ .+|.+.+|++...+........+. .+...+.+++|+|+++ .++++. .++.|++
T Consensus 93 dg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~-~l~~~~~~~~~v~~ 171 (365)
T 1jof_A 93 NTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTET-YLYSADLTANKLWT 171 (365)
T ss_dssp CCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSS-EEEEEETTTTEEEE
T ss_pred CCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCC-EEEEEcCCCCEEEE
Confidence 9862 244553 689999999975343221011111 2456799999999998 555554 4689999
Q ss_pred EECC-CCCC-eeEEEe--cCCCCeEEEEEeCCCCcEEEEEe-CCCCEEEEeCC
Q 018322 304 WDTR-VGKS-ALTSFK--AHNADVNVISWNRLASCLLASGS-DDGTFSIHDLR 351 (358)
Q Consensus 304 wD~r-~~~~-~~~~~~--~h~~~V~~i~~~p~~~~~lasgs-~Dg~i~iwDlr 351 (358)
||+. ++.. .+..+. .|...+..++|+|++ .+|++++ .++.|.+|++.
T Consensus 172 ~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg-~~l~v~~~~~~~v~v~~~~ 223 (365)
T 1jof_A 172 HRKLASGEVELVGSVDAPDPGDHPRWVAMHPTG-NYLYALMEAGNRICEYVID 223 (365)
T ss_dssp EEECTTSCEEEEEEEECSSTTCCEEEEEECTTS-SEEEEEETTTTEEEEEEEC
T ss_pred EEECCCCCEEEeeeEecCCCCCCCCEeEECCCC-CEEEEEECCCCeEEEEEEe
Confidence 9998 5432 122233 246779999999999 6666655 47899999764
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.31 E-value=3.1e-10 Score=105.24 Aligned_cols=167 Identities=10% Similarity=-0.065 Sum_probs=108.6
Q ss_pred CCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCC-CCccccccccccccCCCCCCCCCCCcEEEc--CCCCCeEEEEeCCC
Q 018322 164 HQGCVNRIRAMTQNPHICASWADTGHVQVWDLR-SHLNALAESETIVGQGAPQVSNQSPLVKFG--GHKDEGYAIDWNPI 240 (358)
Q Consensus 164 H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~s~~ 240 (358)
+...+..++|+|++..++++...++.|++|++. ... ...+..+. .|...+..++|+|+
T Consensus 143 ~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~-------------------~~~~~~~~~~~~g~~p~~~~~spd 203 (365)
T 1jof_A 143 ENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGE-------------------VELVGSVDAPDPGDHPRWVAMHPT 203 (365)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSC-------------------EEEEEEEECSSTTCCEEEEEECTT
T ss_pred CCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCC-------------------EEEeeeEecCCCCCCCCEeEECCC
Confidence 567899999999994444444456899999997 310 11122232 24567899999999
Q ss_pred CCCeEEEEeC-CCcEEEEecCC-CCCcc-----c--CCCccccCCC------cEEEEE-ECCCCCCEEEEEEC-CC----
Q 018322 241 TTGRLVTGDC-NSCIYLWEPAS-DATWN-----V--DPNPFIGHSA------SVEDLQ-WSPTEPDVFASCSV-DG---- 299 (358)
Q Consensus 241 ~~~~l~sgs~-dg~I~lwd~~~-~~~~~-----~--~~~~~~~h~~------~V~~v~-~sp~~~~~las~s~-Dg---- 299 (358)
+. +|++++. ++.|.+|++.. .+... . ....+.+|.. .+..++ |+|+++ .|+++.. ..
T Consensus 204 g~-~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~-~l~v~~~~~~~~~~ 281 (365)
T 1jof_A 204 GN-YLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGK-YMFASSRANKFELQ 281 (365)
T ss_dssp SS-EEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSS-EEEEEEEESSTTSC
T ss_pred CC-EEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCC-EEEEECCCCCCCCC
Confidence 98 7777664 78999998753 12211 0 0011123333 588999 999998 4444443 33
Q ss_pred -cEEEEECCCCCCeeE---EEecCCCCeEEEEEeC---CCCcEEEEEeC-CCCEEEEeCCC
Q 018322 300 -HIAIWDTRVGKSALT---SFKAHNADVNVISWNR---LASCLLASGSD-DGTFSIHDLRL 352 (358)
Q Consensus 300 -~I~iwD~r~~~~~~~---~~~~h~~~V~~i~~~p---~~~~~lasgs~-Dg~i~iwDlr~ 352 (358)
.|++|++........ .+..+...+..++|+| ++ .+|++++. ++.|.||++..
T Consensus 282 ~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg-~~l~v~~~~~~~v~v~~~~~ 341 (365)
T 1jof_A 282 GYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSD-EWMAITDDQEGWLEIYRWKD 341 (365)
T ss_dssp CEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCT-TEEEEECSSSCEEEEEEEET
T ss_pred CeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCC-CEEEEEEcCCCeEEEEEEch
Confidence 899999963222222 1333555677889999 78 77777775 58999998754
No 164
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.30 E-value=2.2e-11 Score=123.78 Aligned_cols=143 Identities=9% Similarity=0.033 Sum_probs=103.4
Q ss_pred CceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCC-----eEEEEeCCC
Q 018322 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDE-----GYAIDWNPI 240 (358)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-----v~~l~~s~~ 240 (358)
.....++|+|++ .+++++ +|+|++||+.. .+....+.+|... ...++|||+
T Consensus 17 ~~~~~~~w~~dg-~~~~~~--~~~i~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~Spd 72 (740)
T 4a5s_A 17 LKLYSLRWISDH-EYLYKQ--ENNILVFNAEY---------------------GNSSVFLENSTFDEFGHSINDYSISPD 72 (740)
T ss_dssp CCCCCEEECSSS-EEEEEE--TTEEEEEETTT---------------------CCEEEEECTTTTTTCCSCCCEEEECTT
T ss_pred ccccccEECCCC-cEEEEc--CCcEEEEECCC---------------------CceEEEEechhhhhhcccccceEECCC
Confidence 446689999999 788875 89999999987 3444556666532 234889999
Q ss_pred CCCeEEEEeCC---------CcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCC
Q 018322 241 TTGRLVTGDCN---------SCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKS 311 (358)
Q Consensus 241 ~~~~l~sgs~d---------g~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~ 311 (358)
+. +|+.++.+ +.+.+||+.++ .. ..+..|...+..++|||+|. .||.++ ++.|++||+..+..
T Consensus 73 g~-~l~~~~~~~~~~r~~~~~~~~~~d~~~~-~~----~~l~~~~~~~~~~~~SPdG~-~la~~~-~~~i~~~~~~~~~~ 144 (740)
T 4a5s_A 73 GQ-FILLEYNYVKQWRHSYTASYDIYDLNKR-QL----ITEERIPNNTQWVTWSPVGH-KLAYVW-NNDIYVKIEPNLPS 144 (740)
T ss_dssp SS-EEEEEEEEEECSSSCEEEEEEEEETTTT-EE----CCSSCCCTTEEEEEECSSTT-CEEEEE-TTEEEEESSTTSCC
T ss_pred CC-EEEEEECCeeeEEEccceEEEEEECCCC-cE----EEcccCCCcceeeEECCCCC-EEEEEE-CCeEEEEECCCCce
Confidence 98 88888865 56779999874 32 34566778899999999999 677774 68999999987542
Q ss_pred eeEEEecCCCCe-----------------EEEEEeCCCCcEEEEEeC
Q 018322 312 ALTSFKAHNADV-----------------NVISWNRLASCLLASGSD 341 (358)
Q Consensus 312 ~~~~~~~h~~~V-----------------~~i~~~p~~~~~lasgs~ 341 (358)
...+..++...+ ..+.|+|+| ..||.++.
T Consensus 145 ~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg-~~la~~~~ 190 (740)
T 4a5s_A 145 YRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNG-TFLAYAQF 190 (740)
T ss_dssp EECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTS-SEEEEEEE
T ss_pred EEEcCCCCccceecCcccccccchhcCCCcceEECCCC-CEEEEEEE
Confidence 222222332222 348999999 77777753
No 165
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.26 E-value=8.3e-10 Score=98.30 Aligned_cols=156 Identities=10% Similarity=0.118 Sum_probs=115.7
Q ss_pred CCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEc--CCCCCeEEEEeCCCC
Q 018322 164 HQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG--GHKDEGYAIDWNPIT 241 (358)
Q Consensus 164 H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~s~~~ 241 (358)
+...++.|.+.|++ .++++...++.|++|+... ..+..+. ++...+.+|++++++
T Consensus 119 ~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~g----------------------~~~~~~~~~~~~~~p~~i~~~~~g 175 (286)
T 1q7f_A 119 ILQHPRGVTVDNKG-RIIVVECKVMRVIIFDQNG----------------------NVLHKFGCSKHLEFPNGVVVNDKQ 175 (286)
T ss_dssp TCSCEEEEEECTTS-CEEEEETTTTEEEEECTTS----------------------CEEEEEECTTTCSSEEEEEECSSS
T ss_pred cCCCceEEEEeCCC-CEEEEECCCCEEEEEcCCC----------------------CEEEEeCCCCccCCcEEEEECCCC
Confidence 44678999999998 6888888889999999654 2223332 344578999999998
Q ss_pred CCeEEEEeCCCcEEEEecCCCCCcccCCCccc--cCCCcEEEEEECCCCCCEEEEEECCC-cEEEEECCCCCCeeEEEec
Q 018322 242 TGRLVTGDCNSCIYLWEPASDATWNVDPNPFI--GHSASVEDLQWSPTEPDVFASCSVDG-HIAIWDTRVGKSALTSFKA 318 (358)
Q Consensus 242 ~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~--~h~~~V~~v~~sp~~~~~las~s~Dg-~I~iwD~r~~~~~~~~~~~ 318 (358)
. ++++...++.|++|+... ... ..+. ++...+..|++++++. ++++...++ .|++||... ..+..+..
T Consensus 176 ~-l~v~~~~~~~i~~~~~~g--~~~---~~~~~~g~~~~p~~i~~d~~G~-l~v~~~~~~~~i~~~~~~g--~~~~~~~~ 246 (286)
T 1q7f_A 176 E-IFISDNRAHCVKVFNYEG--QYL---RQIGGEGITNYPIGVGINSNGE-ILIADNHNNFNLTIFTQDG--QLISALES 246 (286)
T ss_dssp E-EEEEEGGGTEEEEEETTC--CEE---EEESCTTTSCSEEEEEECTTCC-EEEEECSSSCEEEEECTTS--CEEEEEEE
T ss_pred C-EEEEECCCCEEEEEcCCC--CEE---EEEccCCccCCCcEEEECCCCC-EEEEeCCCCEEEEEECCCC--CEEEEEcc
Confidence 7 777777789999999743 221 1222 2346789999999997 888888776 999999643 45555544
Q ss_pred CCC--CeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCC
Q 018322 319 HNA--DVNVISWNRLASCLLASGSDDGTFSIHDLRLL 353 (358)
Q Consensus 319 h~~--~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~ 353 (358)
+.. .+..++|.|++ .++++ +.+++|++|++...
T Consensus 247 ~~~~~~~~~i~~~~~g-~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 247 KVKHAQCFDVALMDDG-SVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp SSCCSCEEEEEEETTT-EEEEE-ETTTEEEEEECSCC
T ss_pred cCCCCcceeEEECCCC-cEEEE-CCCCeEEEEEcccc
Confidence 433 47899999999 77777 57899999998654
No 166
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.24 E-value=2.2e-10 Score=106.37 Aligned_cols=162 Identities=12% Similarity=0.010 Sum_probs=109.0
Q ss_pred cCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEE--eCCC
Q 018322 163 AHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAID--WNPI 240 (358)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~--~s~~ 240 (358)
.|...+..+.|+|++ ..|+.++.++.|++||+.. ......+..+...+.... ++++
T Consensus 78 ~~~~~~~~~~~spdg-~~l~~~~~~~~l~~~d~~~---------------------g~~~~~~~~~~~~~~~~~~~~~~d 135 (388)
T 3pe7_A 78 GRGDNTFGGFLSPDD-DALFYVKDGRNLMRVDLAT---------------------LEENVVYQVPAEWVGYGTWVANSD 135 (388)
T ss_dssp SSCBCSSSCEECTTS-SEEEEEETTTEEEEEETTT---------------------CCEEEEEECCTTEEEEEEEEECTT
T ss_pred CCCCCccceEEcCCC-CEEEEEeCCCeEEEEECCC---------------------CcceeeeechhhcccccceeECCC
Confidence 444555577899999 6788888889999999987 344444445554444444 4788
Q ss_pred CCCeEEEE----------------------eCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECC-CCCCEEEEEEC
Q 018322 241 TTGRLVTG----------------------DCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSP-TEPDVFASCSV 297 (358)
Q Consensus 241 ~~~~l~sg----------------------s~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp-~~~~~las~s~ 297 (358)
+. +++.. ..+..|++||+.++.. ..+..+...+..++|+| ++. .|+.++.
T Consensus 136 g~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~-----~~l~~~~~~~~~~~~sp~dg~-~l~~~~~ 208 (388)
T 3pe7_A 136 CT-KLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGES-----TVILQENQWLGHPIYRPYDDS-TVAFCHE 208 (388)
T ss_dssp SS-EEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCE-----EEEEEESSCEEEEEEETTEEE-EEEEEEC
T ss_pred CC-eeccccccCcccccccccchhhhhhccCCcceEEEEECCCCce-----EEeecCCccccccEECCCCCC-EEEEEEe
Confidence 86 66532 2457899999977422 34455677899999999 888 7777665
Q ss_pred C------CcEEEEECCCCCCeeEEEecCC--CCeEEEEEeCCCCcEEEEEeCCC----CEEEEeCCCCCC
Q 018322 298 D------GHIAIWDTRVGKSALTSFKAHN--ADVNVISWNRLASCLLASGSDDG----TFSIHDLRLLKV 355 (358)
Q Consensus 298 D------g~I~iwD~r~~~~~~~~~~~h~--~~V~~i~~~p~~~~~lasgs~Dg----~i~iwDlr~~~~ 355 (358)
. ..|.++|+... ....+..+. ..+..++|+|+|..+++++..++ .|++||+.+++.
T Consensus 209 ~~~~~~~~~l~~~d~~~~--~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~ 276 (388)
T 3pe7_A 209 GPHDLVDARMWLINEDGT--NMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLEN 276 (388)
T ss_dssp SCTTTSSCSEEEEETTSC--CCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCE
T ss_pred cCCCCCcceEEEEeCCCC--ceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCce
Confidence 3 37888887653 334444444 35788899999944444443322 399999988763
No 167
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.21 E-value=2.9e-10 Score=113.54 Aligned_cols=157 Identities=6% Similarity=-0.034 Sum_probs=105.6
Q ss_pred EEEEc--CCCCc-EEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCC-CCcEEEcC-----CCCCeEEEEeCCC
Q 018322 170 RIRAM--TQNPH-ICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQ-SPLVKFGG-----HKDEGYAIDWNPI 240 (358)
Q Consensus 170 ~i~~~--p~~~~-~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----h~~~v~~l~~s~~ 240 (358)
..+|+ |++.. ++++...+..|.++++... . .....+.. |...+.+++|+|+
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~--------------------g~~~~~~l~~~~~~~~~~~~~~~~~spD 140 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAP--------------------GGAVPRPLTPVSAVGGGLRWADPVLLPE 140 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTST--------------------TCCCCEECSCCCCSTTCEEEEEEEEETT
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCCC--------------------CCCCCEeccCCccCCCCccccCcEECCC
Confidence 55565 99955 4444334566777776500 0 11223333 5667889999999
Q ss_pred CCCeEEEEeCC----------CcEEEEecCCC-----CCcccCCCccc-cCCCcEEEEEECCCCCCEEEEEECC------
Q 018322 241 TTGRLVTGDCN----------SCIYLWEPASD-----ATWNVDPNPFI-GHSASVEDLQWSPTEPDVFASCSVD------ 298 (358)
Q Consensus 241 ~~~~l~sgs~d----------g~I~lwd~~~~-----~~~~~~~~~~~-~h~~~V~~v~~sp~~~~~las~s~D------ 298 (358)
+. +|++++.+ ..|++|++... +.. ..+. .+...+..++|||+++ .|+.++.+
T Consensus 141 g~-~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----~~l~~~~~~~~~~~~~SpDG~-~la~~~~~~~~~~~ 214 (662)
T 3azo_A 141 RG-EVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV----RELSDDAHRFVTGPRLSPDGR-QAVWLAWDHPRMPW 214 (662)
T ss_dssp TT-EEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS----EESSCSCSSEECCCEECTTSS-EEEEEEECTTCCTT
T ss_pred CC-EEEEEEecccCCCCCCceeEEEEEECCCCccccCCce----eEEEecCCCcccCceECCCCC-EEEEEECCCCCCCC
Confidence 98 88888766 58999998762 221 2344 4556788899999999 77766644
Q ss_pred --CcEEEEECC-CCC-CeeEEE-ecCCCCeEEEEEeCCCCcEEEEEeCCC--CEEEEeCCCC
Q 018322 299 --GHIAIWDTR-VGK-SALTSF-KAHNADVNVISWNRLASCLLASGSDDG--TFSIHDLRLL 353 (358)
Q Consensus 299 --g~I~iwD~r-~~~-~~~~~~-~~h~~~V~~i~~~p~~~~~lasgs~Dg--~i~iwDlr~~ 353 (358)
..|++||+. ++. .....+ ..|...+..++|+|++ .++++++.++ .|.+||+.+.
T Consensus 215 ~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg-~l~~~~~~~~~~~l~~~~~~~~ 275 (662)
T 3azo_A 215 EGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDG-SLIVATDRTGWWNLHRVDPATG 275 (662)
T ss_dssp TCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTS-CEEEEECTTSSCEEEEECTTTC
T ss_pred CCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCC-eEEEEECCCCCeEEEEEECCCC
Confidence 379999998 431 123333 4457789999999999 6888888888 5666666443
No 168
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.18 E-value=4.7e-09 Score=95.83 Aligned_cols=160 Identities=14% Similarity=0.119 Sum_probs=116.4
Q ss_pred CCceeEEEEcCCCCcEEEEEeCC------------------------CcEEEEeCCCCccccccccccccCCCCCCCCCC
Q 018322 165 QGCVNRIRAMTQNPHICASWADT------------------------GHVQVWDLRSHLNALAESETIVGQGAPQVSNQS 220 (358)
Q Consensus 165 ~~~V~~i~~~p~~~~~lat~s~d------------------------g~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (358)
.+.|.+|+++|++ +++++.+.+ ++|.+||... .+
T Consensus 23 l~~v~~va~d~~G-~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~---------------------g~ 80 (329)
T 3fvz_A 23 PGQVSGVALDSKN-NLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNN---------------------AE 80 (329)
T ss_dssp CSCEEEEEECTTC-CEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTT---------------------CC
T ss_pred cCCceEEEECCCC-CEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCC---------------------Ce
Confidence 4789999999999 788887777 4688888764 23
Q ss_pred CcEEEc-CCCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCcc---------ccCCCcEEEEEECC-CCC
Q 018322 221 PLVKFG-GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPF---------IGHSASVEDLQWSP-TEP 289 (358)
Q Consensus 221 ~~~~~~-~h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~---------~~h~~~V~~v~~sp-~~~ 289 (358)
.+..+. ++.....+|++++++. ++++...++.|++|+........ ..+ .++......|+++| ++.
T Consensus 81 ~~~~~~~~~~~~p~gia~d~~g~-l~v~d~~~~~v~~~~~~g~~~~~---~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~ 156 (329)
T 3fvz_A 81 ILQSSGKNLFYLPHGLSIDTDGN-YWVTDVALHQVFKLDPHSKEGPL---LILGRSMQPGSDQNHFCQPTDVAVEPSTGA 156 (329)
T ss_dssp EEEEECTTTCSSEEEEEECTTSC-EEEEETTTTEEEEECTTCSSCCS---EEESBTTBCCCSTTCCSSEEEEEECTTTCC
T ss_pred EEeccCCCccCCceEEEECCCCC-EEEEECCCCEEEEEeCCCCeEEE---EEecccCCCCCCccccCCCcEEEEeCCCCe
Confidence 333332 3445788999999998 88888889999999985421111 111 23455789999999 666
Q ss_pred CEEEEEE-CCCcEEEEECCCCCCeeEEEecCC----------CCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCC
Q 018322 290 DVFASCS-VDGHIAIWDTRVGKSALTSFKAHN----------ADVNVISWNRLASCLLASGSDDGTFSIHDLRLL 353 (358)
Q Consensus 290 ~~las~s-~Dg~I~iwD~r~~~~~~~~~~~h~----------~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~ 353 (358)
++++.+ .++.|++||.. + ..+..+.... ...+.|+++|++..++++...++.|++||..++
T Consensus 157 -lyv~d~~~~~~I~~~~~~-g-~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G 228 (329)
T 3fvz_A 157 -VFVSDGYCNSRIVQFSPS-G-KFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTK 228 (329)
T ss_dssp -EEEEECSSCCEEEEECTT-S-CEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTC
T ss_pred -EEEEeCCCCCeEEEEcCC-C-CEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCC
Confidence 888886 69999999943 2 3455553222 338999999983388888888999999998744
No 169
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.18 E-value=2.1e-10 Score=114.57 Aligned_cols=166 Identities=10% Similarity=0.059 Sum_probs=111.6
Q ss_pred CCCceeEEEEcCCCCcEEEEEeCC----------CcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEc-CCCCCe
Q 018322 164 HQGCVNRIRAMTQNPHICASWADT----------GHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG-GHKDEG 232 (358)
Q Consensus 164 H~~~V~~i~~~p~~~~~lat~s~d----------g~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v 232 (358)
|...+..++|+|++ +.|++++.+ ..|++||+...... .......+. .+...+
T Consensus 128 ~~~~~~~~~~spDg-~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----------------~~~~~~~l~~~~~~~~ 190 (662)
T 3azo_A 128 GGLRWADPVLLPER-GEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAA----------------DRSAVRELSDDAHRFV 190 (662)
T ss_dssp TCEEEEEEEEETTT-TEEEEEEEEECSSSTTCEEEEEEEEETTSTTTT----------------CGGGSEESSCSCSSEE
T ss_pred CCccccCcEECCCC-CEEEEEEecccCCCCCCceeEEEEEECCCCccc----------------cCCceeEEEecCCCcc
Confidence 66788999999999 567766665 57999998751000 001223344 455677
Q ss_pred EEEEeCCCCCCeEEEEeCC--------CcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCC--cEE
Q 018322 233 YAIDWNPITTGRLVTGDCN--------SCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDG--HIA 302 (358)
Q Consensus 233 ~~l~~s~~~~~~l~sgs~d--------g~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg--~I~ 302 (358)
.+++|+|++. +|+.++.+ ..|++||+...+..........+|...+..+.|+|++. +++++..++ .|.
T Consensus 191 ~~~~~SpDG~-~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~~~~~~~~l~ 268 (662)
T 3azo_A 191 TGPRLSPDGR-QAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVATDRTGWWNLH 268 (662)
T ss_dssp CCCEECTTSS-EEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEEECTTSSCEEE
T ss_pred cCceECCCCC-EEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCe-EEEEECCCCCeEEE
Confidence 8899999998 88877644 37999999732311000122334578899999999999 888888888 555
Q ss_pred EEECCCCCCeeEEEecCCCC---------eEEEEEeCCCCcEEEEEeCCCCEEEE--eCCC
Q 018322 303 IWDTRVGKSALTSFKAHNAD---------VNVISWNRLASCLLASGSDDGTFSIH--DLRL 352 (358)
Q Consensus 303 iwD~r~~~~~~~~~~~h~~~---------V~~i~~~p~~~~~lasgs~Dg~i~iw--Dlr~ 352 (358)
+||+..+ . ...+..+... +..++|+|++ .++++++. +.++|| |+..
T Consensus 269 ~~~~~~~-~-~~~l~~~~~~~~~p~w~~~~~~~~~~~~~-~~~~~~~~-~~~~l~~~d~~~ 325 (662)
T 3azo_A 269 RVDPATG-A-ATQLCRREEEFAGPLWTPGMRWFAPLANG-LIAVVHGK-GAAVLGILDPES 325 (662)
T ss_dssp EECTTTC-C-EEESSCCSSBSSCCCCSTTCCSEEECTTS-CEEEEEBS-SSCEEEEEETTT
T ss_pred EEECCCC-c-eeecccccccccCccccccCceEeEeCCC-EEEEEEEc-CccEEEEEECCC
Confidence 6665443 2 2333222221 5678999988 89999998 999999 5543
No 170
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.17 E-value=7.6e-10 Score=103.18 Aligned_cols=136 Identities=11% Similarity=0.017 Sum_probs=102.8
Q ss_pred ecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCC
Q 018322 162 VAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPIT 241 (358)
Q Consensus 162 ~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~ 241 (358)
+.+.+ |+.+.| ++ .+|+++ .++.|++||+... ........|...+.++.+.+.
T Consensus 85 ~~lp~-V~~l~f--d~-~~L~v~-~~~~l~v~dv~sl---------------------~~~~~~~~~~~~v~~i~~~~p- 137 (388)
T 1xip_A 85 KEIPD-VIFVCF--HG-DQVLVS-TRNALYSLDLEEL---------------------SEFRTVTSFEKPVFQLKNVNN- 137 (388)
T ss_dssp EECTT-EEEEEE--ET-TEEEEE-ESSEEEEEESSST---------------------TCEEEEEECSSCEEEEEECSS-
T ss_pred eeCCC-eeEEEE--CC-CEEEEE-cCCcEEEEEchhh---------------------hccCccceeecceeeEEecCC-
Confidence 35777 999999 56 678877 8899999999873 222344556667888877653
Q ss_pred CCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCe--eEEE---
Q 018322 242 TGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSA--LTSF--- 316 (358)
Q Consensus 242 ~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~--~~~~--- 316 (358)
.+++++.||.|.+||+.+... . .+...|.+++|||.| ++.|..||+|++|+..... . ...+
T Consensus 138 --~~av~~~dG~L~v~dl~~~~~-~-------~~~~~Vs~v~WSpkG---~~vg~~dg~i~~~~~~~~~-~~~k~~I~~P 203 (388)
T 1xip_A 138 --TLVILNSVNDLSALDLRTKST-K-------QLAQNVTSFDVTNSQ---LAVLLKDRSFQSFAWRNGE-MEKQFEFSLP 203 (388)
T ss_dssp --EEEEEETTSEEEEEETTTCCE-E-------EEEESEEEEEECSSE---EEEEETTSCEEEEEEETTE-EEEEEEECCC
T ss_pred --CEEEEECCCCEEEEEccCCcc-c-------cccCCceEEEEcCCc---eEEEEcCCcEEEEcCCCcc-ccccceecCC
Confidence 488889999999999976322 1 245689999999999 6779999999999887632 2 3344
Q ss_pred ---e---cCCCCeEEEEEeCCCCcEEEEE
Q 018322 317 ---K---AHNADVNVISWNRLASCLLASG 339 (358)
Q Consensus 317 ---~---~h~~~V~~i~~~p~~~~~lasg 339 (358)
. +|...|.+|.|.+++ .++++-
T Consensus 204 p~~~~~~~~~~~V~sI~wl~~~-~flv~y 231 (388)
T 1xip_A 204 SELEELPVEEYSPLSVTILSPQ-DFLAVF 231 (388)
T ss_dssp HHHHTSCTTTSEEEEEEESSSS-EEEEEE
T ss_pred cccccccCCCeeEEEEEEecCC-eEEEEE
Confidence 2 377889999999988 666653
No 171
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.16 E-value=3.8e-09 Score=106.68 Aligned_cols=224 Identities=12% Similarity=0.007 Sum_probs=139.9
Q ss_pred CceeeeChhHHHhhhcccccCcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCC
Q 018322 47 GEELQCDPTAYNSLHAFHIGWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKP 126 (358)
Q Consensus 47 ~~~l~~~~~~Y~~~~~~~~~wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~ 126 (358)
.+++..|+....-- -.|..-++.|.||+ .+|+.+....+.....|+|+++..
T Consensus 109 ~~~~lld~~~l~~~----~~~~~~~~~~SPDg-----------~~la~~~~~~G~~~~~i~v~d~~t------------- 160 (710)
T 2xdw_A 109 EARVFLDPNILSDD----GTVALRGYAFSEDG-----------EYFAYGLSASGSDWVTIKFMKVDG------------- 160 (710)
T ss_dssp CCEEEECGGGGCTT----SCEEEEEEEECTTS-----------SEEEEEEEETTCSCEEEEEEETTT-------------
T ss_pred CcEEEECHHHhccC----CCEEEEEEEECCCC-----------CEEEEEEcCCCCceEEEEEEECCC-------------
Confidence 34556666543221 23444578888986 366666665555556888887720
Q ss_pred CCCCCCCCCCCCCCCCCCCCccCCCCCCCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCc----------------E
Q 018322 127 SNDDEDVDSESSDSDEDSDDDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGH----------------V 190 (358)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~----------------V 190 (358)
....... ..+ ..+..+.|+|++ ..|+.++.++. |
T Consensus 161 ---------------------------g~~~~~~-~~~-~~~~~~~wspDg-~~l~~~~~~~~~~~~~~~~~~~~~~~~v 210 (710)
T 2xdw_A 161 ---------------------------AKELPDV-LER-VKFSCMAWTHDG-KGMFYNAYPQQDGKSDGTETSTNLHQKL 210 (710)
T ss_dssp ---------------------------TEEEEEE-EEE-ECSCCEEECTTS-SEEEEEECCCCSSCCSSSCCCCCCCCEE
T ss_pred ---------------------------CCCCccc-ccC-cccceEEEEeCC-CEEEEEEECCccccccccccccCCCCEE
Confidence 1111111 122 226789999999 56666666655 9
Q ss_pred EEEeCCCCccccccccccccCCCCCCCCCCCcEEEcC--CCCCeEEEEeCCCCCCeEEEEeC-----CCcEEEEecCC--
Q 018322 191 QVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGG--HKDEGYAIDWNPITTGRLVTGDC-----NSCIYLWEPAS-- 261 (358)
Q Consensus 191 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~l~~s~~~~~~l~sgs~-----dg~I~lwd~~~-- 261 (358)
++|++.... ......+.. |...+.++.|+|++. +|+.++. +..|++||+.+
T Consensus 211 ~~~~l~t~~-------------------~~~~~v~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~~~l~~~d~~~~~ 270 (710)
T 2xdw_A 211 YYHVLGTDQ-------------------SEDILCAEFPDEPKWMGGAELSDDGR-YVLLSIREGCDPVNRLWYCDLQQES 270 (710)
T ss_dssp EEEETTSCG-------------------GGCEEEECCTTCTTCEEEEEECTTSC-EEEEEEECSSSSCCEEEEEEGGGSS
T ss_pred EEEECCCCc-------------------ccceEEeccCCCCeEEEEEEEcCCCC-EEEEEEEccCCCccEEEEEECcccc
Confidence 999997621 111222332 445678999999998 7776654 56899999865
Q ss_pred ----CCCcccCCCccccCCCcEEEEEECCCCCCEEEEEEC-C---CcEEEEECCCCCC-eeEEEecCCC--CeEEEEEeC
Q 018322 262 ----DATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSV-D---GHIAIWDTRVGKS-ALTSFKAHNA--DVNVISWNR 330 (358)
Q Consensus 262 ----~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~-D---g~I~iwD~r~~~~-~~~~~~~h~~--~V~~i~~~p 330 (358)
+... ...+..+...+.. .|+|++. .|+..+. + +.|.+||+..+.. ....+..|.. .+..++|++
T Consensus 271 ~~~~~~~~---~~~l~~~~~~~~~-~~s~dg~-~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 345 (710)
T 2xdw_A 271 NGITGILK---WVKLIDNFEGEYD-YVTNEGT-VFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVR 345 (710)
T ss_dssp SSSCSSCC---CEEEECSSSSCEE-EEEEETT-EEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEET
T ss_pred cccCCccc---eEEeeCCCCcEEE-EEeccCC-EEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEc
Confidence 2211 2345556555555 4888888 4544444 3 3699999987531 2345555544 688899997
Q ss_pred CCCcEEEEEeCCC--CEEEEeCCCCC
Q 018322 331 LASCLLASGSDDG--TFSIHDLRLLK 354 (358)
Q Consensus 331 ~~~~~lasgs~Dg--~i~iwDlr~~~ 354 (358)
.+ .+++++..++ .|.+||+.+++
T Consensus 346 ~~-~lv~~~~~~g~~~l~~~~~~~g~ 370 (710)
T 2xdw_A 346 SN-FLVLCYLHDVKNTLQLHDLATGA 370 (710)
T ss_dssp TT-EEEEEEEETTEEEEEEEETTTCC
T ss_pred CC-EEEEEEEECCEEEEEEEECCCCC
Confidence 77 8999998888 46667875543
No 172
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.16 E-value=4.2e-10 Score=104.94 Aligned_cols=155 Identities=10% Similarity=0.044 Sum_probs=111.8
Q ss_pred ceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCeEE
Q 018322 167 CVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLV 246 (358)
Q Consensus 167 ~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~l~ 246 (358)
.++.+++++.. .++++|+.++ +.+|++............ ...+.... .+.. |+.|+| ++. +|+
T Consensus 39 ~~nlLais~~~-gll~a~~~~~-l~v~~~~~l~~~~~~~~~----------~~~~~~~~-~lp~-V~~l~f--d~~-~L~ 101 (388)
T 1xip_A 39 SLQNLDISNSK-SLFVAASGSK-AVVGELQLLRDHITSDST----------PLTFKWEK-EIPD-VIFVCF--HGD-QVL 101 (388)
T ss_dssp CCBCEEEETTT-TEEEEEETTE-EEEEEHHHHHHHHHSSSC----------CCCCSEEE-ECTT-EEEEEE--ETT-EEE
T ss_pred cccEEEEcCCC-CEEEEeCCCE-EEEEEhhHhhhhhccccc----------cccceEEe-eCCC-eeEEEE--CCC-EEE
Confidence 69999999988 6888888874 666997653211110000 02333333 3555 999999 666 888
Q ss_pred EEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEecCCCCeEEE
Q 018322 247 TGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVI 326 (358)
Q Consensus 247 sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i 326 (358)
++ .++.|++||+++... ......|...+.++.+.+. -+|+++.||.|.+||+..+. .. . +...|.|+
T Consensus 102 v~-~~~~l~v~dv~sl~~----~~~~~~~~~~v~~i~~~~p---~~av~~~dG~L~v~dl~~~~-~~-~---~~~~Vs~v 168 (388)
T 1xip_A 102 VS-TRNALYSLDLEELSE----FRTVTSFEKPVFQLKNVNN---TLVILNSVNDLSALDLRTKS-TK-Q---LAQNVTSF 168 (388)
T ss_dssp EE-ESSEEEEEESSSTTC----EEEEEECSSCEEEEEECSS---EEEEEETTSEEEEEETTTCC-EE-E---EEESEEEE
T ss_pred EE-cCCcEEEEEchhhhc----cCccceeecceeeEEecCC---CEEEEECCCCEEEEEccCCc-cc-c---ccCCceEE
Confidence 88 789999999977432 1345567778888887654 28889999999999998743 32 2 44579999
Q ss_pred EEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 327 SWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 327 ~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
+|+|.| ++.|..||++++|+.....
T Consensus 169 ~WSpkG---~~vg~~dg~i~~~~~~~~~ 193 (388)
T 1xip_A 169 DVTNSQ---LAVLLKDRSFQSFAWRNGE 193 (388)
T ss_dssp EECSSE---EEEEETTSCEEEEEEETTE
T ss_pred EEcCCc---eEEEEcCCcEEEEcCCCcc
Confidence 999999 6778899999999876543
No 173
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.13 E-value=8.5e-09 Score=93.71 Aligned_cols=165 Identities=10% Similarity=0.015 Sum_probs=113.3
Q ss_pred EEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCC
Q 018322 160 RKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNP 239 (358)
Q Consensus 160 ~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~ 239 (358)
.+..+...+.+++|+|++ .+++++..++.|++||... .........+...+.+++|++
T Consensus 39 ~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~i~~~d~~~---------------------~~~~~~~~~~~~~~~~i~~~~ 96 (333)
T 2dg1_A 39 EISKKGLQLEGLNFDRQG-QLFLLDVFEGNIFKINPET---------------------KEIKRPFVSHKANPAAIKIHK 96 (333)
T ss_dssp EEESSCCCEEEEEECTTS-CEEEEETTTCEEEEECTTT---------------------CCEEEEEECSSSSEEEEEECT
T ss_pred EEeccCccccCcEECCCC-CEEEEECCCCEEEEEeCCC---------------------CcEEEEeeCCCCCcceEEECC
Confidence 445677778999999988 6888888899999999875 222222324556899999999
Q ss_pred CCCCeEEEEeCC----CcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEEC------CCcEEEEECCCC
Q 018322 240 ITTGRLVTGDCN----SCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSV------DGHIAIWDTRVG 309 (358)
Q Consensus 240 ~~~~~l~sgs~d----g~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~------Dg~I~iwD~r~~ 309 (358)
++. +++++..+ +.|.+||......... .. ...+...+.+++++|++. ++++... .+.|..+|...+
T Consensus 97 dg~-l~v~~~~~~~~~~~i~~~d~~~~~~~~~-~~-~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~l~~~~~~~~ 172 (333)
T 2dg1_A 97 DGR-LFVCYLGDFKSTGGIFAATENGDNLQDI-IE-DLSTAYCIDDMVFDSKGG-FYFTDFRGYSTNPLGGVYYVSPDFR 172 (333)
T ss_dssp TSC-EEEEECTTSSSCCEEEEECTTSCSCEEE-EC-SSSSCCCEEEEEECTTSC-EEEEECCCBTTBCCEEEEEECTTSC
T ss_pred CCc-EEEEeCCCCCCCceEEEEeCCCCEEEEE-Ec-cCccCCcccceEECCCCC-EEEEeccccccCCCceEEEEeCCCC
Confidence 986 77776655 6899999866322100 00 012446799999999997 7766553 245666665542
Q ss_pred CCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCC
Q 018322 310 KSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRL 352 (358)
Q Consensus 310 ~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~ 352 (358)
.+..+..+...++.++|+|++..++++.+.++.|.+||+++
T Consensus 173 --~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~ 213 (333)
T 2dg1_A 173 --TVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALED 213 (333)
T ss_dssp --CEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred --EEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecC
Confidence 22333333445889999999933556666788999999864
No 174
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.12 E-value=1.7e-09 Score=100.25 Aligned_cols=164 Identities=10% Similarity=-0.066 Sum_probs=111.8
Q ss_pred EEEecCCCceeE-----EEEcCCCCcEEEEEeC-CCc--EEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCC
Q 018322 159 LRKVAHQGCVNR-----IRAMTQNPHICASWAD-TGH--VQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKD 230 (358)
Q Consensus 159 ~~~~~H~~~V~~-----i~~~p~~~~~lat~s~-dg~--V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 230 (358)
.++..|.+.+.. .+|+|++ ..||.++. +|. |.+||+.. ........++..
T Consensus 24 ~~lt~~~~~~~~~~~~~~~~SpDg-~~l~~~~~~~g~~~l~~~d~~~---------------------g~~~~lt~~~~~ 81 (388)
T 3pe7_A 24 TRLTPPDVTCHRNYFYQKCFTRDG-SKLLFGGAFDGPWNYYLLDLNT---------------------QVATQLTEGRGD 81 (388)
T ss_dssp EECSCTTSCEECCCTTSCCBCTTS-CEEEEEECTTSSCEEEEEETTT---------------------CEEEECCCSSCB
T ss_pred EEecCCcccccchhhcCccCCCCC-CEEEEEEcCCCCceEEEEeCCC---------------------CceEEeeeCCCC
Confidence 445566666666 8899999 55666565 774 77778765 233333445555
Q ss_pred CeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEE--ECCCCCCEEEEE-------------
Q 018322 231 EGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQ--WSPTEPDVFASC------------- 295 (358)
Q Consensus 231 ~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~--~sp~~~~~las~------------- 295 (358)
.+.++.|+|++. +|+.++.++.|++||+.++... ..+..+...+.... ++|++. +++..
T Consensus 82 ~~~~~~~spdg~-~l~~~~~~~~l~~~d~~~g~~~----~~~~~~~~~~~~~~~~~~~dg~-~l~~~~~~~~~~~~~~~~ 155 (388)
T 3pe7_A 82 NTFGGFLSPDDD-ALFYVKDGRNLMRVDLATLEEN----VVYQVPAEWVGYGTWVANSDCT-KLVGIEIRREDWVPLTDW 155 (388)
T ss_dssp CSSSCEECTTSS-EEEEEETTTEEEEEETTTCCEE----EEEECCTTEEEEEEEEECTTSS-EEEEEEEEGGGCCCCCSH
T ss_pred CccceEEcCCCC-EEEEEeCCCeEEEEECCCCcce----eeeechhhcccccceeECCCCC-eeccccccCccccccccc
Confidence 556788999998 9999998999999999874321 12333444444444 489988 66532
Q ss_pred ---------ECCCcEEEEECCCCCCeeEEEecCCCCeEEEEEeC-CCCcEEEEEeCC------CCEEEEeCCCC
Q 018322 296 ---------SVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNR-LASCLLASGSDD------GTFSIHDLRLL 353 (358)
Q Consensus 296 ---------s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~~p-~~~~~lasgs~D------g~i~iwDlr~~ 353 (358)
..+..|.+||+.++. ...+..+...+..++|+| ++ ..|+.++.. ..|.++|+...
T Consensus 156 ~~~~~~~~~~~~~~l~~~d~~~g~--~~~l~~~~~~~~~~~~sp~dg-~~l~~~~~~~~~~~~~~l~~~d~~~~ 226 (388)
T 3pe7_A 156 KKFHEFYFTKPCCRLMRVDLKTGE--STVILQENQWLGHPIYRPYDD-STVAFCHEGPHDLVDARMWLINEDGT 226 (388)
T ss_dssp HHHHHHGGGCCCEEEEEEETTTCC--EEEEEEESSCEEEEEEETTEE-EEEEEEECSCTTTSSCSEEEEETTSC
T ss_pred chhhhhhccCCcceEEEEECCCCc--eEEeecCCccccccEECCCCC-CEEEEEEecCCCCCcceEEEEeCCCC
Confidence 234689999998853 445556677899999999 88 777666543 37888887654
No 175
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.11 E-value=2.6e-09 Score=95.65 Aligned_cols=159 Identities=12% Similarity=0.040 Sum_probs=115.0
Q ss_pred cCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCC
Q 018322 163 AHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITT 242 (358)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~ 242 (358)
.+.....++.|+|++..+++++..++.|++|+... . ...+..+...+.+|++++++.
T Consensus 25 ~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~---------------------~--~~~~~~~~~~~~~l~~~~dg~ 81 (296)
T 3e5z_A 25 DGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDG---------------------Q--LSPEMHPSHHQNGHCLNKQGH 81 (296)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTS---------------------C--EEEEESSCSSEEEEEECTTCC
T ss_pred cCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCC---------------------C--eEEEECCCCCcceeeECCCCc
Confidence 46677889999999955889999999999999876 2 445556677899999999987
Q ss_pred CeEEEEeCCCcEEEEecCCCCCcccCCCcccc-CCCcEEEEEECCCCCCEEEEEEC-----------------CCcEEEE
Q 018322 243 GRLVTGDCNSCIYLWEPASDATWNVDPNPFIG-HSASVEDLQWSPTEPDVFASCSV-----------------DGHIAIW 304 (358)
Q Consensus 243 ~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~-h~~~V~~v~~sp~~~~~las~s~-----------------Dg~I~iw 304 (358)
++++...++.|.+||..++. .........+ ....+++++++|++. ++++.+. .+.|..+
T Consensus 82 -l~v~~~~~~~i~~~d~~~g~-~~~~~~~~~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~ 158 (296)
T 3e5z_A 82 -LIACSHGLRRLERQREPGGE-WESIADSFEGKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGRWVFRL 158 (296)
T ss_dssp -EEEEETTTTEEEEECSTTCC-EEEEECEETTEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSCEEEEE
T ss_pred -EEEEecCCCeEEEEcCCCCc-EEEEeeccCCCCCCCCCCEEECCCCC-EEEECCccccccccccccccccCCCcEEEEE
Confidence 77776667899999986633 2211111111 123577899999998 7777321 2355555
Q ss_pred ECCCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCC
Q 018322 305 DTRVGKSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLR 351 (358)
Q Consensus 305 D~r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr 351 (358)
+.. ..+..+..+....+.++|+|++ .+|++.+.++.|.+||+.
T Consensus 159 ~~~---g~~~~~~~~~~~~~gi~~s~dg-~~lv~~~~~~~i~~~~~~ 201 (296)
T 3e5z_A 159 APD---GTLSAPIRDRVKPNGLAFLPSG-NLLVSDTGDNATHRYCLN 201 (296)
T ss_dssp CTT---SCEEEEECCCSSEEEEEECTTS-CEEEEETTTTEEEEEEEC
T ss_pred CCC---CCEEEeecCCCCCccEEECCCC-CEEEEeCCCCeEEEEEEC
Confidence 544 2344455666778999999999 666888888999999986
No 176
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.11 E-value=1.5e-09 Score=109.60 Aligned_cols=165 Identities=7% Similarity=-0.044 Sum_probs=107.9
Q ss_pred CCCceeEEEEcCCCCcEEEEEeCC-C----cEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeC
Q 018322 164 HQGCVNRIRAMTQNPHICASWADT-G----HVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWN 238 (358)
Q Consensus 164 H~~~V~~i~~~p~~~~~lat~s~d-g----~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 238 (358)
|...+..++|+|++ .+||.++.+ | +|++||+.. ...+.....+ ..+.+++|+
T Consensus 123 ~~~~~~~~~~SPDg-~~la~~~~~~G~~~~~i~v~d~~t---------------------g~~~~~~~~~-~~~~~~~ws 179 (710)
T 2xdw_A 123 GTVALRGYAFSEDG-EYFAYGLSASGSDWVTIKFMKVDG---------------------AKELPDVLER-VKFSCMAWT 179 (710)
T ss_dssp SCEEEEEEEECTTS-SEEEEEEEETTCSCEEEEEEETTT---------------------TEEEEEEEEE-ECSCCEEEC
T ss_pred CCEEEEEEEECCCC-CEEEEEEcCCCCceEEEEEEECCC---------------------CCCCcccccC-cccceEEEE
Confidence 44568899999999 566654443 3 899999987 2222211111 125689999
Q ss_pred CCCCCeEEEEeCCCc----------------EEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEEC-----
Q 018322 239 PITTGRLVTGDCNSC----------------IYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSV----- 297 (358)
Q Consensus 239 ~~~~~~l~sgs~dg~----------------I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~----- 297 (358)
|++. .|+.++.++. |++|++.++............|...+..+.|+|+++ .|+.++.
T Consensus 180 pDg~-~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~ 257 (710)
T 2xdw_A 180 HDGK-GMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGR-YVLLSIREGCDP 257 (710)
T ss_dssp TTSS-EEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSC-EEEEEEECSSSS
T ss_pred eCCC-EEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCC-EEEEEEEccCCC
Confidence 9998 7877777665 999999764321110112223456688999999999 5555543
Q ss_pred CCcEEEEECCC------CCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCC---CCEEEEeCCCCC
Q 018322 298 DGHIAIWDTRV------GKSALTSFKAHNADVNVISWNRLASCLLASGSDD---GTFSIHDLRLLK 354 (358)
Q Consensus 298 Dg~I~iwD~r~------~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~D---g~i~iwDlr~~~ 354 (358)
+..|++||+.. +......+..+...+.. .|++++..+++++..+ +.|.+||+.++.
T Consensus 258 ~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 322 (710)
T 2xdw_A 258 VNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPE 322 (710)
T ss_dssp CCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCC
T ss_pred ccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCC
Confidence 56899999976 33245566666666655 5888884555554433 369999998764
No 177
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.05 E-value=8.2e-08 Score=87.14 Aligned_cols=159 Identities=10% Similarity=0.076 Sum_probs=106.7
Q ss_pred cCCCceeEEEEcCCCCcEEEEEeCC----CcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEc--CCCCCeEEEE
Q 018322 163 AHQGCVNRIRAMTQNPHICASWADT----GHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG--GHKDEGYAID 236 (358)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~lat~s~d----g~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~l~ 236 (358)
.+...+.++.++|++ .++++...+ +.|.+||.... .....+. .+...+.+++
T Consensus 84 ~~~~~~~~i~~~~dg-~l~v~~~~~~~~~~~i~~~d~~~~---------------------~~~~~~~~~~~~~~~~~i~ 141 (333)
T 2dg1_A 84 SHKANPAAIKIHKDG-RLFVCYLGDFKSTGGIFAATENGD---------------------NLQDIIEDLSTAYCIDDMV 141 (333)
T ss_dssp CSSSSEEEEEECTTS-CEEEEECTTSSSCCEEEEECTTSC---------------------SCEEEECSSSSCCCEEEEE
T ss_pred CCCCCcceEEECCCC-cEEEEeCCCCCCCceEEEEeCCCC---------------------EEEEEEccCccCCcccceE
Confidence 567889999999998 677776666 68999998762 1111121 2345788999
Q ss_pred eCCCCCCeEEEEeC------CCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCC
Q 018322 237 WNPITTGRLVTGDC------NSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGK 310 (358)
Q Consensus 237 ~s~~~~~~l~sgs~------dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~ 310 (358)
++|++. ++++... .+.|..|+... +.. ..+..+...+..++|+|++..++++.+.++.|.+||++...
T Consensus 142 ~d~~g~-l~v~~~~~~~~~~~~~l~~~~~~~-~~~----~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g 215 (333)
T 2dg1_A 142 FDSKGG-FYFTDFRGYSTNPLGGVYYVSPDF-RTV----TPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDG 215 (333)
T ss_dssp ECTTSC-EEEEECCCBTTBCCEEEEEECTTS-CCE----EEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTS
T ss_pred ECCCCC-EEEEeccccccCCCceEEEEeCCC-CEE----EEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCC
Confidence 999986 6665543 24566666543 221 12223334578999999997455666678999999997422
Q ss_pred CeeEE--------EecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCC
Q 018322 311 SALTS--------FKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLR 351 (358)
Q Consensus 311 ~~~~~--------~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr 351 (358)
..+.. +..+ ..+..+++.+++ .++++...++.|.+||..
T Consensus 216 ~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G-~l~v~~~~~~~v~~~d~~ 262 (333)
T 2dg1_A 216 VTIQPFGATIPYYFTGH-EGPDSCCIDSDD-NLYVAMYGQGRVLVFNKR 262 (333)
T ss_dssp SSEEEEEEEEEEECCSS-SEEEEEEEBTTC-CEEEEEETTTEEEEECTT
T ss_pred cCcccccceEEEecCCC-CCCCceEECCCC-CEEEEEcCCCEEEEECCC
Confidence 22211 1112 367889999999 788877778899999974
No 178
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.04 E-value=5.9e-08 Score=86.73 Aligned_cols=158 Identities=11% Similarity=0.037 Sum_probs=106.7
Q ss_pred EecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEc---C-CCCCeEEEE
Q 018322 161 KVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG---G-HKDEGYAID 236 (358)
Q Consensus 161 ~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-h~~~v~~l~ 236 (358)
...+.+.+.++.+.|++ .++++...++.|.+||.... ....... + ....+.+++
T Consensus 64 ~~~~~~~~~~l~~~~dg-~l~v~~~~~~~i~~~d~~~g---------------------~~~~~~~~~~~~~~~~~~~i~ 121 (296)
T 3e5z_A 64 EMHPSHHQNGHCLNKQG-HLIACSHGLRRLERQREPGG---------------------EWESIADSFEGKKLNSPNDVC 121 (296)
T ss_dssp EESSCSSEEEEEECTTC-CEEEEETTTTEEEEECSTTC---------------------CEEEEECEETTEECCCCCCEE
T ss_pred EECCCCCcceeeECCCC-cEEEEecCCCeEEEEcCCCC---------------------cEEEEeeccCCCCCCCCCCEE
Confidence 34567889999999998 67777777789999998541 1111111 1 112466899
Q ss_pred eCCCCCCeEEE----Ee-------------CCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCC
Q 018322 237 WNPITTGRLVT----GD-------------CNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDG 299 (358)
Q Consensus 237 ~s~~~~~~l~s----gs-------------~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg 299 (358)
++|++. ++++ |. ..+.|..++.. +.. ..+..+....+.++|+|++. ++++.+.++
T Consensus 122 ~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~--g~~----~~~~~~~~~~~gi~~s~dg~-~lv~~~~~~ 193 (296)
T 3e5z_A 122 LAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD--GTL----SAPIRDRVKPNGLAFLPSGN-LLVSDTGDN 193 (296)
T ss_dssp ECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT--SCE----EEEECCCSSEEEEEECTTSC-EEEEETTTT
T ss_pred ECCCCC-EEEECCccccccccccccccccCCCcEEEEECCC--CCE----EEeecCCCCCccEEECCCCC-EEEEeCCCC
Confidence 999987 7776 33 12455555543 221 23344566788999999998 567788889
Q ss_pred cEEEEECCCCCCe---eEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCC
Q 018322 300 HIAIWDTRVGKSA---LTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLR 351 (358)
Q Consensus 300 ~I~iwD~r~~~~~---~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr 351 (358)
.|.+||+...... ...+..+...+..|++.++| +++++. ++.|.+||..
T Consensus 194 ~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G-~l~v~~--~~~v~~~~~~ 245 (296)
T 3e5z_A 194 ATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGG-LIWASA--GDGVHVLTPD 245 (296)
T ss_dssp EEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTS-CEEEEE--TTEEEEECTT
T ss_pred eEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCC-CEEEEc--CCeEEEECCC
Confidence 9999999732222 12223345567789999999 766666 7889999975
No 179
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.03 E-value=6.5e-10 Score=103.17 Aligned_cols=153 Identities=11% Similarity=0.055 Sum_probs=98.8
Q ss_pred EEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEE---------------
Q 018322 170 RIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYA--------------- 234 (358)
Q Consensus 170 ~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~--------------- 234 (358)
.+.|+|++ ..|+..+.++.|++||+... .....+..+......
T Consensus 85 ~~~~spdg-~~l~~~~~~~~l~~~d~~~~---------------------~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~ 142 (396)
T 3c5m_A 85 GGFISTDE-RAFFYVKNELNLMKVDLETL---------------------EEQVIYTVDEEWKGYGTWVANSDCTKLVGI 142 (396)
T ss_dssp TCEECTTS-SEEEEEETTTEEEEEETTTC---------------------CEEEEEECCTTEEEEEEEEECTTSSEEEEE
T ss_pred cceECCCC-CEEEEEEcCCcEEEEECCCC---------------------CcEEEEecccccCCCCCEEEeccCCccccc
Confidence 47899999 68888888889999998762 222222222221111
Q ss_pred ----EEeCCCCCCeEEEE-----eCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECC-CCCCEEEEEECC------
Q 018322 235 ----IDWNPITTGRLVTG-----DCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSP-TEPDVFASCSVD------ 298 (358)
Q Consensus 235 ----l~~s~~~~~~l~sg-----s~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp-~~~~~las~s~D------ 298 (358)
++|+|++. .++.+ ..+..|++||+.++.. ..+..+...+..+.|+| ++. .|+.++.+
T Consensus 143 ~~~~~~~spdg~-~~~~~~~~~~~~~~~l~~~d~~~g~~-----~~~~~~~~~~~~~~~sp~dg~-~l~~~~~~~~~~~~ 215 (396)
T 3c5m_A 143 EILKRDWQPLTS-WEKFAEFYHTNPTCRLIKVDIETGEL-----EVIHQDTAWLGHPIYRPFDDS-TVGFCHEGPHDLVD 215 (396)
T ss_dssp EEEGGGCCCCCS-HHHHHHHHHTCCCEEEEEEETTTCCE-----EEEEEESSCEEEEEEETTEEE-EEEEEECSCSSSCS
T ss_pred cccccccCCCCc-ceeeeeeccCCCcceEEEEECCCCcE-----EeeccCCcccccceECCCCCC-EEEEEecCCCCCCC
Confidence 45788876 55443 4567899999976322 22335667899999999 676 56665543
Q ss_pred CcEEEEECCCCCCeeEEEecC--CCCeEEEEEeCCCCcEEEEEeCC-----CCEEEEeCCCCC
Q 018322 299 GHIAIWDTRVGKSALTSFKAH--NADVNVISWNRLASCLLASGSDD-----GTFSIHDLRLLK 354 (358)
Q Consensus 299 g~I~iwD~r~~~~~~~~~~~h--~~~V~~i~~~p~~~~~lasgs~D-----g~i~iwDlr~~~ 354 (358)
..|.+||+..+. ...+..+ ...+..++|+|++ ..|+.++.+ +.|++||+.+++
T Consensus 216 ~~l~~~d~~~~~--~~~l~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~~l~~~d~~~g~ 275 (396)
T 3c5m_A 216 ARMWLVNEDGSN--VRKIKEHAEGESCTHEFWIPDG-SAMAYVSYFKGQTDRVIYKANPETLE 275 (396)
T ss_dssp CCCEEEETTSCC--CEESSCCCTTEEEEEEEECTTS-SCEEEEEEETTTCCEEEEEECTTTCC
T ss_pred ceEEEEECCCCc--eeEeeccCCCccccceEECCCC-CEEEEEecCCCCccceEEEEECCCCC
Confidence 368888886532 3333333 2357889999999 555544332 349999998765
No 180
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.03 E-value=3.1e-08 Score=91.76 Aligned_cols=67 Identities=9% Similarity=0.152 Sum_probs=54.1
Q ss_pred EEECCCCCCEEEEEEC----------CCcEEEEECCCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCC
Q 018322 282 LQWSPTEPDVFASCSV----------DGHIAIWDTRVGKSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLR 351 (358)
Q Consensus 282 v~~sp~~~~~las~s~----------Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr 351 (358)
++|+|++..++++.+. .+.|.+||+.+. +.+.++..+. +..|+|+|++ .+|++++. +.|.+||+.
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~-~~v~~i~~~~--p~~ia~spdg-~~l~v~n~-~~v~v~D~~ 333 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTK-QRVARIPGRD--ALSMTIDQQR-NLMLTLDG-GNVNVYDIS 333 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTT-EEEEEEECTT--CCEEEEETTT-TEEEEECS-SCEEEEECS
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCC-cEEEEEecCC--eeEEEECCCC-CEEEEeCC-CeEEEEECC
Confidence 6889998756666551 348999999984 5777777776 8999999999 67777776 999999999
Q ss_pred CC
Q 018322 352 LL 353 (358)
Q Consensus 352 ~~ 353 (358)
++
T Consensus 334 t~ 335 (361)
T 2oiz_A 334 QP 335 (361)
T ss_dssp SS
T ss_pred CC
Confidence 87
No 181
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.02 E-value=1.5e-08 Score=90.00 Aligned_cols=155 Identities=12% Similarity=0.080 Sum_probs=111.6
Q ss_pred CCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEE------cCCCCCeEEEEe
Q 018322 164 HQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF------GGHKDEGYAIDW 237 (358)
Q Consensus 164 H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~h~~~v~~l~~ 237 (358)
|...+.+|.+.+++ .++++.+.++.|++||.... .+..+ .+|...+.++++
T Consensus 28 ~~~~p~~v~~~~~g-~l~v~~~~~~~i~~~d~~g~----------------------~~~~~~~~~~~~~~~~~p~~i~~ 84 (286)
T 1q7f_A 28 QFTEPSGVAVNAQN-DIIVADTNNHRIQIFDKEGR----------------------FKFQFGECGKRDSQLLYPNRVAV 84 (286)
T ss_dssp CBSCEEEEEECTTC-CEEEEEGGGTEEEEECTTSC----------------------EEEEECCBSSSTTCBSSEEEEEE
T ss_pred ccCCCceEEECCCC-CEEEEECCCCEEEEECCCCc----------------------EEEEecccCCCcccccCceEEEE
Confidence 44678899999988 68888888999999997641 12222 134457889999
Q ss_pred -CCCCCCeEEEEeC-CCcEEEEecCCCCCcccCCCcc-ccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeE
Q 018322 238 -NPITTGRLVTGDC-NSCIYLWEPASDATWNVDPNPF-IGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALT 314 (358)
Q Consensus 238 -s~~~~~~l~sgs~-dg~I~lwd~~~~~~~~~~~~~~-~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~ 314 (358)
.+.+. ++++... ++.|.+|+. + +... ..+ ..+...+.+++++|++. ++++...++.|++||... ..+.
T Consensus 85 ~~~~g~-l~v~~~~~~~~i~~~d~-~-g~~~---~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g--~~~~ 155 (286)
T 1q7f_A 85 VRNSGD-IIVTERSPTHQIQIYNQ-Y-GQFV---RKFGATILQHPRGVTVDNKGR-IIVVECKVMRVIIFDQNG--NVLH 155 (286)
T ss_dssp ETTTTE-EEEEECGGGCEEEEECT-T-SCEE---EEECTTTCSCEEEEEECTTSC-EEEEETTTTEEEEECTTS--CEEE
T ss_pred EcCCCe-EEEEcCCCCCEEEEECC-C-CcEE---EEecCccCCCceEEEEeCCCC-EEEEECCCCEEEEEcCCC--CEEE
Confidence 45554 5555433 789999994 3 2222 122 12445789999999997 888888889999999653 3444
Q ss_pred EEe--cCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCC
Q 018322 315 SFK--AHNADVNVISWNRLASCLLASGSDDGTFSIHDLR 351 (358)
Q Consensus 315 ~~~--~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr 351 (358)
.+. .+...++.|++++++ .++++...++.|++||..
T Consensus 156 ~~~~~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~ 193 (286)
T 1q7f_A 156 KFGCSKHLEFPNGVVVNDKQ-EIFISDNRAHCVKVFNYE 193 (286)
T ss_dssp EEECTTTCSSEEEEEECSSS-EEEEEEGGGTEEEEEETT
T ss_pred EeCCCCccCCcEEEEECCCC-CEEEEECCCCEEEEEcCC
Confidence 443 345578999999999 788888888999999974
No 182
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.02 E-value=6.8e-09 Score=94.77 Aligned_cols=160 Identities=11% Similarity=0.070 Sum_probs=114.0
Q ss_pred CCCceeEEEEcC-CCCcEEEEEe-CCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEc----------CCCCC
Q 018322 164 HQGCVNRIRAMT-QNPHICASWA-DTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG----------GHKDE 231 (358)
Q Consensus 164 H~~~V~~i~~~p-~~~~~lat~s-~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~h~~~ 231 (358)
+....+.|+++| .+ .++++.+ .++.|++|+... ..+..+. ++...
T Consensus 141 ~~~~P~~ia~~~~~g-~lyv~d~~~~~~I~~~~~~g----------------------~~~~~~~~~g~~~~~~~~~~~~ 197 (329)
T 3fvz_A 141 HFCQPTDVAVEPSTG-AVFVSDGYCNSRIVQFSPSG----------------------KFVTQWGEESSGSSPRPGQFSV 197 (329)
T ss_dssp CCSSEEEEEECTTTC-CEEEEECSSCCEEEEECTTS----------------------CEEEEECEECCSSSCCTTEESC
T ss_pred ccCCCcEEEEeCCCC-eEEEEeCCCCCeEEEEcCCC----------------------CEEEEeccCCCCCCCCCcccCC
Confidence 455788999999 56 7888876 689999999543 2222222 12234
Q ss_pred eEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEE-------CCCcEEEE
Q 018322 232 GYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCS-------VDGHIAIW 304 (358)
Q Consensus 232 v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s-------~Dg~I~iw 304 (358)
..+|+++|++..++++...++.|++|+..+ +..... .....+...+.+++|+| +. ++++.+ .+..|++|
T Consensus 198 p~gia~d~~~g~l~v~d~~~~~I~~~~~~~-G~~~~~-~~~~~~~~~~~~~~~~p-g~-~~~~~g~~~v~~~~~~~v~~~ 273 (329)
T 3fvz_A 198 PHSLALVPHLDQLCVADRENGRIQCFKTDT-KEFVRE-IKHASFGRNVFAISYIP-GF-LFAVNGKPYFGDQEPVQGFVM 273 (329)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTT-CCEEEE-ECCTTTTTCEEEEEEET-TE-EEEEECCCCTTCSCCCCEEEE
T ss_pred CcEEEEECCCCEEEEEECCCCEEEEEECCC-CcEEEE-EeccccCCCcceeeecC-CE-EEEeCCCEEeccCCCcEEEEE
Confidence 789999998332777777889999999975 332211 11234567788999999 32 344433 34589999
Q ss_pred ECCCCCCeeEEE---ecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCC
Q 018322 305 DTRVGKSALTSF---KAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRL 352 (358)
Q Consensus 305 D~r~~~~~~~~~---~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~ 352 (358)
|+.++ ..+..+ ..+...+..|+++|++ .++++...++.|++|++..
T Consensus 274 ~~~~g-~~~~~~~~~~~~~~~p~~ia~~~dG-~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 274 NFSSG-EIIDVFKPVRKHFDMPHDIVASEDG-TVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp ETTTC-CEEEEECCSSSCCSSEEEEEECTTS-EEEEEESSSCCEEEEEEEE
T ss_pred EcCCC-eEEEEEcCCCCccCCeeEEEECCCC-CEEEEECCCCEEEEEeCCc
Confidence 99885 455555 3567779999999999 9999999999999999864
No 183
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.01 E-value=4.5e-09 Score=105.90 Aligned_cols=162 Identities=9% Similarity=-0.042 Sum_probs=105.5
Q ss_pred cCCCceeEEEEcCCCCcEEE-----EEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCc-E-EEcCCCCCeEEE
Q 018322 163 AHQGCVNRIRAMTQNPHICA-----SWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPL-V-KFGGHKDEGYAI 235 (358)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~la-----t~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~h~~~v~~l 235 (358)
+|...+..++|+|++ .+|| .|+.+.+|++||+... ..+ . .+... ...++
T Consensus 118 ~~~~~~~~~~~SPDG-~~la~~~~~~G~~~~~i~v~dl~tg---------------------~~~~~~~~~~~--~~~~~ 173 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDG-KKVAFAQKPNAADEAVLHVIDVDSG---------------------EWSKVDVIEGG--KYATP 173 (695)
T ss_dssp SSCEEEEEEEECTTS-SEEEEEEEETTCSCCEEEEEETTTC---------------------CBCSSCCBSCC--TTCCC
T ss_pred CCCEEEEEEEECCCC-CEEEEEECCCCCceEEEEEEECCCC---------------------CCcCCcccCcc--cccce
Confidence 456679999999999 5566 3444568999999872 211 0 11111 12579
Q ss_pred EeCCCCCCeEEEEeCCCc-------------EEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCC---
Q 018322 236 DWNPITTGRLVTGDCNSC-------------IYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDG--- 299 (358)
Q Consensus 236 ~~s~~~~~~l~sgs~dg~-------------I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg--- 299 (358)
+|+|++. .|+.++.+.. |++|++.++............|...+..+.|+|+++ .++.++.++
T Consensus 174 ~wspDg~-~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~-~l~~~~~~~~~~ 251 (695)
T 2bkl_A 174 KWTPDSK-GFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGK-YLFVYILRGWSE 251 (695)
T ss_dssp EECTTSS-EEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSC-CEEEEEEETTTE
T ss_pred EEecCCC-EEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCC-EEEEEEeCCCCc
Confidence 9999998 8888887766 999999764321111122334556789999999998 444444444
Q ss_pred -cEEEEECCCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEe---CCCCEEEEeCCCCC
Q 018322 300 -HIAIWDTRVGKSALTSFKAHNADVNVISWNRLASCLLASGS---DDGTFSIHDLRLLK 354 (358)
Q Consensus 300 -~I~iwD~r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs---~Dg~i~iwDlr~~~ 354 (358)
.|.+|+...+ ....+..+...+....| +++. +++++. .++.|.+||+.+++
T Consensus 252 ~~l~~~~~~~~--~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~ 306 (695)
T 2bkl_A 252 NDVYWKRPGEK--DFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPA 306 (695)
T ss_dssp EEEEEECTTCS--SCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCS
T ss_pred eEEEEEcCCCC--ceEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCC
Confidence 6666665442 34556566666667777 5673 555554 35789999997764
No 184
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.96 E-value=8.8e-09 Score=94.03 Aligned_cols=143 Identities=8% Similarity=0.009 Sum_probs=91.0
Q ss_pred eeEEEEcCCCCcEEEEEeC---------------------------CCcEEEEeCCCCccccccccccccCCCCCCCCCC
Q 018322 168 VNRIRAMTQNPHICASWAD---------------------------TGHVQVWDLRSHLNALAESETIVGQGAPQVSNQS 220 (358)
Q Consensus 168 V~~i~~~p~~~~~lat~s~---------------------------dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (358)
+..+.|+|++ ..|+.++. ...|++||+.. ..
T Consensus 106 ~~~~~wspdg-~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~---------------------~~ 163 (347)
T 2gop_A 106 IRSLEWNEDS-RKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTES---------------------EE 163 (347)
T ss_dssp EEEEEECTTS-SEEEEEEECCCC---------CCCC---------CEEEEEEEETTT---------------------TE
T ss_pred ccceeECCCC-CEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCC---------------------Ce
Confidence 9999999999 45555442 25688888865 22
Q ss_pred CcEEEcCCCCCeEEEEeCCCCCCeEEEEeCCC-------cEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEE
Q 018322 221 PLVKFGGHKDEGYAIDWNPITTGRLVTGDCNS-------CIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFA 293 (358)
Q Consensus 221 ~~~~~~~h~~~v~~l~~s~~~~~~l~sgs~dg-------~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~la 293 (358)
.+..+.. . .+..++|+|++ +++++..++ ...||.+. .+.. ..+..+ ..+..+ +|++. .|+
T Consensus 164 ~~~~l~~-~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d-~~~~----~~l~~~-~~~~~~--spdg~-~l~ 230 (347)
T 2gop_A 164 VIEEFEK-P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWE-DGKE----EKMFEK-VSFYAV--DSDGE-RIL 230 (347)
T ss_dssp EEEEEEE-E-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEE-TTEE----EEEEEE-ESEEEE--EECSS-CEE
T ss_pred EEeeecC-C-CcccccCCCCe--EEEEEecccccccccccccEEEeC-CCce----EEeccC-cceeeE--CCCCC-EEE
Confidence 2122333 2 67789999998 677765542 44555554 2332 223334 445444 99998 555
Q ss_pred EEECC--------CcEEEEECCCCCCeeEEEecCCCCeEE-EEEeCCCCcEEEEEeCCCCEEEEeCCC
Q 018322 294 SCSVD--------GHIAIWDTRVGKSALTSFKAHNADVNV-ISWNRLASCLLASGSDDGTFSIHDLRL 352 (358)
Q Consensus 294 s~s~D--------g~I~iwD~r~~~~~~~~~~~h~~~V~~-i~~~p~~~~~lasgs~Dg~i~iwDlr~ 352 (358)
.++.+ ..|.+|| ++ ........|...+.. +.|+ ++ ++++++.++.++|| +.+
T Consensus 231 ~~~~~~~~~~~~~~~l~~~d--~~-~~~~l~~~~~~~~~~~~~~s-dg--~~~~~~~~~~~~l~-~~~ 291 (347)
T 2gop_A 231 LYGKPEKKYMSEHNKLYIYD--GK-EVMGILDEVDRGVGQAKIKD-GK--VYFTLFEEGSVNLY-IWD 291 (347)
T ss_dssp EEECCSSSCCCSSCEEEEEC--SS-CEEESSTTCCSEEEEEEEET-TE--EEEEEEETTEEEEE-EES
T ss_pred EEEccccCCccccceEEEEC--CC-ceEeccccCCcccCCccEEc-Cc--EEEEEecCCcEEEE-EcC
Confidence 55543 4688888 32 232222455667886 8999 66 88889999999999 763
No 185
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.96 E-value=2.7e-08 Score=100.22 Aligned_cols=219 Identities=9% Similarity=-0.036 Sum_probs=136.5
Q ss_pred CceeeeChhHHHhhhcccccCcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCC
Q 018322 47 GEELQCDPTAYNSLHAFHIGWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKP 126 (358)
Q Consensus 47 ~~~l~~~~~~Y~~~~~~~~~wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~ 126 (358)
.++.-.|+....-=| .|...++.|.||+ .+|+.+....+.+...|+|+++..-
T Consensus 105 ~~~~l~d~~~~a~~~----~~~~~~~~~SPDG-----------~~la~~~~~~G~~~~~i~v~dl~tg------------ 157 (695)
T 2bkl_A 105 QEKVLLDPNGWSKDG----TVSLGTWAVSWDG-----------KKVAFAQKPNAADEAVLHVIDVDSG------------ 157 (695)
T ss_dssp CCEEEECGGGSSSSS----CEEEEEEEECTTS-----------SEEEEEEEETTCSCCEEEEEETTTC------------
T ss_pred CcEEEEchHHhccCC----CEEEEEEEECCCC-----------CEEEEEECCCCCceEEEEEEECCCC------------
Confidence 344555554432222 3666788898996 3666666666666788999987310
Q ss_pred CCCCCCCCCCCCCCCCCCCCccCCCCCCCeEEEEEecCCCc--eeEEEEcCCCCcEEEEEeCCCc-------------EE
Q 018322 127 SNDDEDVDSESSDSDEDSDDDEEGGSGTPILQLRKVAHQGC--VNRIRAMTQNPHICASWADTGH-------------VQ 191 (358)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~--V~~i~~~p~~~~~lat~s~dg~-------------V~ 191 (358)
+.. . ..+... ...+.|+|++ ..|+.++.+.. |+
T Consensus 158 ---------------------------~~~-~---~~~~~~~~~~~~~wspDg-~~l~~~~~d~~~~~~~~~~~~~~~v~ 205 (695)
T 2bkl_A 158 ---------------------------EWS-K---VDVIEGGKYATPKWTPDS-KGFYYEWLPTDPSIKVDERPGYTTIR 205 (695)
T ss_dssp ---------------------------CBC-S---SCCBSCCTTCCCEECTTS-SEEEEEECCCCTTSCGGGGGGGCEEE
T ss_pred ---------------------------CCc-C---CcccCcccccceEEecCC-CEEEEEEecCCCCCccccCCCCCEEE
Confidence 000 0 001111 2678999999 56777777665 99
Q ss_pred EEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCeEEEEeCCC----cEEEEecCCCCCccc
Q 018322 192 VWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNS----CIYLWEPASDATWNV 267 (358)
Q Consensus 192 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~l~sgs~dg----~I~lwd~~~~~~~~~ 267 (358)
+|++...... ...+.....|...+.++.|+|++. +|+.++.++ .|++|+... +.
T Consensus 206 ~~~l~t~~~~-----------------~~lv~~~~~~~~~~~~~~~SpDG~-~l~~~~~~~~~~~~l~~~~~~~-~~--- 263 (695)
T 2bkl_A 206 YHTLGTEPSK-----------------DTVVHERTGDPTTFLQSDLSRDGK-YLFVYILRGWSENDVYWKRPGE-KD--- 263 (695)
T ss_dssp EEETTSCGGG-----------------CEEEECCCCCTTCEEEEEECTTSC-CEEEEEEETTTEEEEEEECTTC-SS---
T ss_pred EEECCCCchh-----------------ceEEEecCCCCEEEEEEEECCCCC-EEEEEEeCCCCceEEEEEcCCC-Cc---
Confidence 9999762110 012222234556788999999998 777666555 666665533 22
Q ss_pred CCCccccCCCcEEEEEECCCCCCEEEEEE---CCCcEEEEECCCCCC-eeEEEecC--CCCeEEEEEeCCCCcEEEEEeC
Q 018322 268 DPNPFIGHSASVEDLQWSPTEPDVFASCS---VDGHIAIWDTRVGKS-ALTSFKAH--NADVNVISWNRLASCLLASGSD 341 (358)
Q Consensus 268 ~~~~~~~h~~~V~~v~~sp~~~~~las~s---~Dg~I~iwD~r~~~~-~~~~~~~h--~~~V~~i~~~p~~~~~lasgs~ 341 (358)
...+..+...+....| +++. ++++.. .++.|.+||+.++.. ....+..| ...|..++|+ ++ .+++++..
T Consensus 264 -~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~-~lv~~~~~ 338 (695)
T 2bkl_A 264 -FRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GG-HLSLEYLK 338 (695)
T ss_dssp -CEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TT-EEEEEEEE
T ss_pred -eEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CC-EEEEEEEE
Confidence 2345556666667667 6666 666655 358999999977531 12344333 4457888998 55 79999999
Q ss_pred CCCEEEEeCC
Q 018322 342 DGTFSIHDLR 351 (358)
Q Consensus 342 Dg~i~iwDlr 351 (358)
|+..+||.+.
T Consensus 339 dg~~~l~~~~ 348 (695)
T 2bkl_A 339 DATSEVRVAT 348 (695)
T ss_dssp TTEEEEEEEE
T ss_pred CCEEEEEEEe
Confidence 9988887554
No 186
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.95 E-value=1.1e-07 Score=84.81 Aligned_cols=166 Identities=11% Similarity=-0.028 Sum_probs=116.9
Q ss_pred eEEEEEecCC-CceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCC-CCCeE
Q 018322 156 ILQLRKVAHQ-GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGH-KDEGY 233 (358)
Q Consensus 156 ~~~~~~~~H~-~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~ 233 (358)
.+..++..+. ..++.+.+.|++ ++++ +.++.|+.||. . .+.+..+..+ ...+.
T Consensus 26 ~~~w~~~~~~~~~~~~~~~~pdG-~ilv--s~~~~V~~~d~-~---------------------G~~~W~~~~~~~~~~~ 80 (276)
T 3no2_A 26 EIVWEYPLEKGWECNSVAATKAG-EILF--SYSKGAKMITR-D---------------------GRELWNIAAPAGCEMQ 80 (276)
T ss_dssp EEEEEEECCTTCCCCEEEECTTS-CEEE--ECBSEEEEECT-T---------------------SCEEEEEECCTTCEEE
T ss_pred eEEEEeCCCccCCCcCeEECCCC-CEEE--eCCCCEEEECC-C---------------------CCEEEEEcCCCCcccc
Confidence 3434444454 478999999999 6777 35678999998 4 3555566554 34788
Q ss_pred EEEeCCCCCCeEEEEeC-CCcEEEEecCCCCCcc--cCC-CccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCC
Q 018322 234 AIDWNPITTGRLVTGDC-NSCIYLWEPASDATWN--VDP-NPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVG 309 (358)
Q Consensus 234 ~l~~s~~~~~~l~sgs~-dg~I~lwd~~~~~~~~--~~~-~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~ 309 (358)
++.+.+++. +|++.+. ++.|..++. + ++.. ... .....+......+++.+++. ++++...++.|..||.. +
T Consensus 81 ~~~~~~dG~-~lv~~~~~~~~v~~vd~-~-Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~-~lv~~~~~~~v~~~d~~-G 155 (276)
T 3no2_A 81 TARILPDGN-ALVAWCGHPSTILEVNM-K-GEVLSKTEFETGIERPHAQFRQINKNKKGN-YLVPLFATSEVREIAPN-G 155 (276)
T ss_dssp EEEECTTSC-EEEEEESTTEEEEEECT-T-SCEEEEEEECCSCSSGGGSCSCCEECTTSC-EEEEETTTTEEEEECTT-S
T ss_pred ccEECCCCC-EEEEecCCCCEEEEEeC-C-CCEEEEEeccCCCCcccccccCceECCCCC-EEEEecCCCEEEEECCC-C
Confidence 999999998 8888776 777777775 3 3321 000 01112223455667889988 89999999999999987 5
Q ss_pred CCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 310 KSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 310 ~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
+.+.++..+ ..+..+.+.+++ .++++++.++.|..+|..+++
T Consensus 156 -~~~w~~~~~-~~~~~~~~~~~g-~~~v~~~~~~~v~~~d~~tG~ 197 (276)
T 3no2_A 156 -QLLNSVKLS-GTPFSSAFLDNG-DCLVACGDAHCFVQLNLESNR 197 (276)
T ss_dssp -CEEEEEECS-SCCCEEEECTTS-CEEEECBTTSEEEEECTTTCC
T ss_pred -CEEEEEECC-CCccceeEcCCC-CEEEEeCCCCeEEEEeCcCCc
Confidence 466777654 345677888988 888888888899999988665
No 187
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.91 E-value=5.9e-08 Score=85.17 Aligned_cols=159 Identities=7% Similarity=-0.091 Sum_probs=113.6
Q ss_pred CceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCeE
Q 018322 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRL 245 (358)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~l 245 (358)
..++.+.+.+++ .++++...++.|.+|+.... ............+.+|++++++. ++
T Consensus 108 ~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~~~---------------------~~~~~~~~~~~~p~~i~~~~~g~-l~ 164 (270)
T 1rwi_B 108 NYPEGLAVDTQG-AVYVADRGNNRVVKLAAGSK---------------------TQTVLPFTGLNDPDGVAVDNSGN-VY 164 (270)
T ss_dssp SSEEEEEECTTC-CEEEEEGGGTEEEEECTTCC---------------------SCEECCCCSCCSCCCEEECTTCC-EE
T ss_pred CCCcceEECCCC-CEEEEECCCCEEEEEECCCc---------------------eeEeeccccCCCceeEEEeCCCC-EE
Confidence 568899999988 67877777889999975441 11111112233567899999887 77
Q ss_pred EEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEecCCCCeEE
Q 018322 246 VTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNV 325 (358)
Q Consensus 246 ~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~ 325 (358)
++...++.|.+|+........ ....+...+.+|++++++. ++++...++.|.+||..... .......+...+..
T Consensus 165 v~~~~~~~i~~~~~~~~~~~~----~~~~~~~~p~~i~~d~~g~-l~v~~~~~~~v~~~~~~~~~-~~~~~~~~~~~p~~ 238 (270)
T 1rwi_B 165 VTDTDNNRVVKLEAESNNQVV----LPFTDITAPWGIAVDEAGT-VYVTEHNTNQVVKLLAGSTT-STVLPFTGLNTPLA 238 (270)
T ss_dssp EEEGGGTEEEEECTTTCCEEE----CCCSSCCSEEEEEECTTCC-EEEEETTTSCEEEECTTCSC-CEECCCCSCSCEEE
T ss_pred EEECCCCEEEEEecCCCceEe----ecccCCCCceEEEECCCCC-EEEEECCCCcEEEEcCCCCc-ceeeccCCCCCcee
Confidence 777778899999986532211 1112336788999999986 88888889999999987532 22211233356899
Q ss_pred EEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 326 ISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 326 i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
|++.+++ .++++...++.|+++++...+
T Consensus 239 i~~~~~g-~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 239 VAVDSDR-TVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp EEECTTC-CEEEEEGGGTEEEEECCCGGG
T ss_pred EEECCCC-CEEEEECCCCEEEEEcCCCcc
Confidence 9999999 799998899999999987543
No 188
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.90 E-value=3.7e-07 Score=89.56 Aligned_cols=169 Identities=11% Similarity=0.058 Sum_probs=114.6
Q ss_pred CCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeC----C
Q 018322 164 HQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWN----P 239 (358)
Q Consensus 164 H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s----~ 239 (358)
....+..+.|+|++ +++.+++.++.|.+||+... +.+.+..+... .....++|+ |
T Consensus 195 ~g~~p~~v~~SpDG-r~lyv~~~dg~V~viD~~~~-------------------t~~~v~~i~~G-~~P~~ia~s~~~~p 253 (567)
T 1qks_A 195 TGYAVHISRLSASG-RYLFVIGRDGKVNMIDLWMK-------------------EPTTVAEIKIG-SEARSIETSKMEGW 253 (567)
T ss_dssp CSSCEEEEEECTTS-CEEEEEETTSEEEEEETTSS-------------------SCCEEEEEECC-SEEEEEEECCSTTC
T ss_pred CCCCccceEECCCC-CEEEEEcCCCeEEEEECCCC-------------------CCcEeEEEecC-CCCceeEEccccCC
Confidence 34467799999999 56777789999999999510 13444455432 346789999 6
Q ss_pred CCCCeEEEEe-CCCcEEEEecCCCCCccc-CCCc--cc---cCCC-cEEEEEECCCCCCEEEEEECCCcEEEEECCCCCC
Q 018322 240 ITTGRLVTGD-CNSCIYLWEPASDATWNV-DPNP--FI---GHSA-SVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKS 311 (358)
Q Consensus 240 ~~~~~l~sgs-~dg~I~lwd~~~~~~~~~-~~~~--~~---~h~~-~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~ 311 (358)
++. ++++++ .+++|.++|..+...... .... .. .|.. .+..+..++.+..++++....|.|.++|......
T Consensus 254 DGk-~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~ 332 (567)
T 1qks_A 254 EDK-YAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNN 332 (567)
T ss_dssp TTT-EEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSE
T ss_pred CCC-EEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCcc
Confidence 998 666554 568999999866332110 0000 11 1222 6788999998886777777889999999987432
Q ss_pred eeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 312 ALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 312 ~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
....-.........+.|+|++.+++++...++.|.++|+.+++
T Consensus 333 ~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~k 375 (567)
T 1qks_A 333 LKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGK 375 (567)
T ss_dssp EEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTE
T ss_pred ceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCc
Confidence 2222223445677899999994455556577899999998764
No 189
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.88 E-value=2.8e-07 Score=80.81 Aligned_cols=158 Identities=4% Similarity=-0.093 Sum_probs=111.3
Q ss_pred CCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEc-CCCCCeEEEEeCCCCC
Q 018322 164 HQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG-GHKDEGYAIDWNPITT 242 (358)
Q Consensus 164 H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~s~~~~ 242 (358)
+...+..|.+.+++ .++++.. ++.|.+||.... ....+. .....+.+|++++++.
T Consensus 65 ~~~~p~~i~~~~~g-~l~v~~~-~~~i~~~d~~~~----------------------~~~~~~~~~~~~p~~i~~~~~g~ 120 (270)
T 1rwi_B 65 GLYQPQGLAVDGAG-TVYVTDF-NNRVVTLAAGSN----------------------NQTVLPFDGLNYPEGLAVDTQGA 120 (270)
T ss_dssp SCCSCCCEEECTTC-CEEEEET-TTEEEEECTTCS----------------------CCEECCCCSCSSEEEEEECTTCC
T ss_pred CcCCcceeEECCCC-CEEEEcC-CCEEEEEeCCCc----------------------eEeeeecCCcCCCcceEECCCCC
Confidence 34567889999988 5666655 889999997652 111222 2224688999999887
Q ss_pred CeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEecCCCC
Q 018322 243 GRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNAD 322 (358)
Q Consensus 243 ~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~ 322 (358)
++++...++.|.+|+..+..... ........+.+|++++++. ++++...++.|.+||..... .......+...
T Consensus 121 -l~v~~~~~~~i~~~~~~~~~~~~----~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~-~~~~~~~~~~~ 193 (270)
T 1rwi_B 121 -VYVADRGNNRVVKLAAGSKTQTV----LPFTGLNDPDGVAVDNSGN-VYVTDTDNNRVVKLEAESNN-QVVLPFTDITA 193 (270)
T ss_dssp -EEEEEGGGTEEEEECTTCCSCEE----CCCCSCCSCCCEEECTTCC-EEEEEGGGTEEEEECTTTCC-EEECCCSSCCS
T ss_pred -EEEEECCCCEEEEEECCCceeEe----eccccCCCceeEEEeCCCC-EEEEECCCCEEEEEecCCCc-eEeecccCCCC
Confidence 77777778899999764421111 1112234678899999997 88888888999999987632 22222233366
Q ss_pred eEEEEEeCCCCcEEEEEeCCCCEEEEeCCCC
Q 018322 323 VNVISWNRLASCLLASGSDDGTFSIHDLRLL 353 (358)
Q Consensus 323 V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~ 353 (358)
+..|++.+++ .++++...++.|.+||....
T Consensus 194 p~~i~~d~~g-~l~v~~~~~~~v~~~~~~~~ 223 (270)
T 1rwi_B 194 PWGIAVDEAG-TVYVTEHNTNQVVKLLAGST 223 (270)
T ss_dssp EEEEEECTTC-CEEEEETTTSCEEEECTTCS
T ss_pred ceEEEECCCC-CEEEEECCCCcEEEEcCCCC
Confidence 8999999999 88888888899999998653
No 190
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.81 E-value=1.2e-07 Score=87.75 Aligned_cols=159 Identities=10% Similarity=0.038 Sum_probs=98.1
Q ss_pred cCCCceeEEEEcC-CCCcEEEEEeCC------CcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCC--CCeE
Q 018322 163 AHQGCVNRIRAMT-QNPHICASWADT------GHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHK--DEGY 233 (358)
Q Consensus 163 ~H~~~V~~i~~~p-~~~~~lat~s~d------g~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~--~~v~ 233 (358)
.+...+..+.|+| ++ ..|+..+.+ ..|.+|++.. .. ...+..+. ..+.
T Consensus 185 ~~~~~~~~~~~sp~dg-~~l~~~~~~~~~~~~~~l~~~d~~~---------------------~~-~~~l~~~~~~~~~~ 241 (396)
T 3c5m_A 185 QDTAWLGHPIYRPFDD-STVGFCHEGPHDLVDARMWLVNEDG---------------------SN-VRKIKEHAEGESCT 241 (396)
T ss_dssp EESSCEEEEEEETTEE-EEEEEEECSCSSSCSCCCEEEETTS---------------------CC-CEESSCCCTTEEEE
T ss_pred cCCcccccceECCCCC-CEEEEEecCCCCCCCceEEEEECCC---------------------Cc-eeEeeccCCCcccc
Confidence 5677899999999 66 445554443 3578888754 11 12222222 2577
Q ss_pred EEEeCCCCCCeEEEEeCC-----CcEEEEecCCCCCcccCCCccccCCCcEEEEEECC-CCCCEEEEEE-----------
Q 018322 234 AIDWNPITTGRLVTGDCN-----SCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSP-TEPDVFASCS----------- 296 (358)
Q Consensus 234 ~l~~s~~~~~~l~sgs~d-----g~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp-~~~~~las~s----------- 296 (358)
.++|+|++. +|+.++.+ +.|++||+.++.. . .+.... ... +.|+| ++. ++++++
T Consensus 242 ~~~~spdg~-~l~~~~~~~~~~~~~l~~~d~~~g~~-~----~l~~~~-~~~-~~~s~~dg~-~l~~~~~~~p~~~~~~~ 312 (396)
T 3c5m_A 242 HEFWIPDGS-AMAYVSYFKGQTDRVIYKANPETLEN-E----EVMVMP-PCS-HLMSNFDGS-LMVGDGCDAPVDVADAD 312 (396)
T ss_dssp EEEECTTSS-CEEEEEEETTTCCEEEEEECTTTCCE-E----EEEECC-SEE-EEEECSSSS-EEEEEECCC--------
T ss_pred ceEECCCCC-EEEEEecCCCCccceEEEEECCCCCe-E----EeeeCC-CCC-CCccCCCCc-eEEEecCCcceeecccc
Confidence 899999998 66666443 4499999976332 1 111111 123 89999 998 776654
Q ss_pred -----CCCcEEEEECCCCCCeeEEEecCCC-----------CeEEEEEeCCCCcEEEEEe-CCCC--EEEEeCCCCCCC
Q 018322 297 -----VDGHIAIWDTRVGKSALTSFKAHNA-----------DVNVISWNRLASCLLASGS-DDGT--FSIHDLRLLKVR 356 (358)
Q Consensus 297 -----~Dg~I~iwD~r~~~~~~~~~~~h~~-----------~V~~i~~~p~~~~~lasgs-~Dg~--i~iwDlr~~~~~ 356 (358)
.++.|++||+..+. ...+..+.. .+..++|+|++ ..|+.++ .++. |.++|+......
T Consensus 313 ~~~~~~~~~i~~~d~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~s~~~~~~~l~~~~~~~~~~~ 388 (396)
T 3c5m_A 313 SYNIENDPFLYVLNTKAKS--AQKLCKHSTSWDVLDGDRQITHPHPSFTPND-DGVLFTSDFEGVPAIYIADVPESYKH 388 (396)
T ss_dssp --CCCCCCEEEEEETTTTB--CCEEEECCCCCCCBTTBSSTTCCCCEECTTS-SEEEEEECTTSSCEEEEEECCTTCC-
T ss_pred ccccCCCCcEEEEecccCc--eEEccCCCCccccccccccCCCCCceEccCC-CeEEEEecCCCCceEEEEEEcccccc
Confidence 34789999998743 234544544 25678999999 5555554 4555 444555555543
No 191
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.79 E-value=9.8e-07 Score=78.13 Aligned_cols=162 Identities=7% Similarity=-0.004 Sum_probs=113.1
Q ss_pred EEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeC
Q 018322 159 LRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWN 238 (358)
Q Consensus 159 ~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 238 (358)
..+..+...+.++.+.+++ .+.++...++.|.+||..... ....+..+...+.+|++.
T Consensus 8 ~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~v~~~d~~~~~---------------------~~~~~~~~~~~~~~i~~~ 65 (299)
T 2z2n_A 8 LNLTNQDTGPYGITVSDKG-KVWITQHKANMISCINLDGKI---------------------TEYPLPTPDAKVMCLTIS 65 (299)
T ss_dssp EECCSSSCCEEEEEECTTS-CEEEEETTTTEEEEECTTCCE---------------------EEEECSSTTCCEEEEEEC
T ss_pred EcCCCcCCCccceEECCCC-CEEEEecCCCcEEEEcCCCCe---------------------EEecCCcccCceeeEEEC
Confidence 3444556789999999998 577766667899999976311 011112234578899999
Q ss_pred CCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEec
Q 018322 239 PITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKA 318 (358)
Q Consensus 239 ~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~ 318 (358)
+++. ++++...++.|..|+.. +.... .........+.++++.+++. ++++...++.|.+||. .+.........
T Consensus 66 ~~g~-l~v~~~~~~~i~~~~~~--g~~~~--~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~-~g~~~~~~~~~ 138 (299)
T 2z2n_A 66 SDGE-VWFTENAANKIGRITKK--GIIKE--YTLPNPDSAPYGITEGPNGD-IWFTEMNGNRIGRITD-DGKIREYELPN 138 (299)
T ss_dssp TTSC-EEEEETTTTEEEEECTT--SCEEE--EECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECT-TCCEEEEECSS
T ss_pred CCCC-EEEeCCCCCeEEEECCC--CcEEE--EeCCCcCCCceeeEECCCCC-EEEEecCCceEEEECC-CCCEEEecCCC
Confidence 9886 77776668899999975 22110 11122445789999999887 8887777889999998 43322222233
Q ss_pred CCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeC
Q 018322 319 HNADVNVISWNRLASCLLASGSDDGTFSIHDL 350 (358)
Q Consensus 319 h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDl 350 (358)
+...++.+++.+++ .++++...++.|.+||.
T Consensus 139 ~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~ 169 (299)
T 2z2n_A 139 KGSYPSFITLGSDN-ALWFTENQNNAIGRITE 169 (299)
T ss_dssp TTCCEEEEEECTTS-CEEEEETTTTEEEEECT
T ss_pred CCCCCceEEEcCCC-CEEEEeCCCCEEEEEcC
Confidence 45678999999999 78887777789999988
No 192
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.76 E-value=1.3e-07 Score=95.97 Aligned_cols=162 Identities=11% Similarity=-0.010 Sum_probs=99.2
Q ss_pred CCCceeEEEEcCCCCcEEEEEeCC-C----cEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeC
Q 018322 164 HQGCVNRIRAMTQNPHICASWADT-G----HVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWN 238 (358)
Q Consensus 164 H~~~V~~i~~~p~~~~~lat~s~d-g----~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 238 (358)
|...+..++|+|++ .+||.++.+ | +|++||+.. ...+.. ..+...+.+++|+
T Consensus 161 ~~~~~~~~~~SPDG-~~la~~~~~~G~e~~~i~v~dl~t---------------------g~~~~~-~~~~~~~~~~~ws 217 (741)
T 1yr2_A 161 GATALDAWAASDDG-RLLAYSVQDGGSDWRTVKFVGVAD---------------------GKPLAD-ELKWVKFSGLAWL 217 (741)
T ss_dssp --EEEEEEEECTTS-SEEEEEEEETTCSEEEEEEEETTT---------------------CCEEEE-EEEEEESCCCEES
T ss_pred CCEEEEeEEECCCC-CEEEEEEcCCCCceEEEEEEECCC---------------------CCCCCc-cCCCceeccEEEE
Confidence 44578899999999 555554443 3 599999987 222221 1111123578999
Q ss_pred CCCCCeEEEEeCCCc--------------EEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECC-----C
Q 018322 239 PITTGRLVTGDCNSC--------------IYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVD-----G 299 (358)
Q Consensus 239 ~~~~~~l~sgs~dg~--------------I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~D-----g 299 (358)
|+ . .|+.++.++. |++|++.++............+...+..+.|+|+++ .++..+.+ .
T Consensus 218 pD-~-~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~-~l~~~~~~~~~~~~ 294 (741)
T 1yr2_A 218 GN-D-ALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGR-WVVITSSEGTDPVN 294 (741)
T ss_dssp TT-S-EEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSC-EEEEEEECTTCSCC
T ss_pred CC-C-EEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCC-EEEEEEEccCCCcc
Confidence 99 7 7776666554 889998653321110111222334588999999999 55555543 3
Q ss_pred cEEEEECCCCCCe-eEEEecCCCCeEEEEEeCCCCcEEEEEeC----CCCEEEEeCCCC
Q 018322 300 HIAIWDTRVGKSA-LTSFKAHNADVNVISWNRLASCLLASGSD----DGTFSIHDLRLL 353 (358)
Q Consensus 300 ~I~iwD~r~~~~~-~~~~~~h~~~V~~i~~~p~~~~~lasgs~----Dg~i~iwDlr~~ 353 (358)
.|++||+..+... ...+..+...+.... .|++ ..|+..+. ++.|.+||+.++
T Consensus 295 ~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg-~~l~~~s~~~~~~~~l~~~d~~~~ 351 (741)
T 1yr2_A 295 TVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVG-DQLWFVSGDGAPLKKIVRVDLSGS 351 (741)
T ss_dssp EEEEEEEETTEECCCEEEECSSSSCEEEE-EEET-TEEEEEECTTCTTCEEEEEECSSS
T ss_pred eEEEEECCCCCCcccEEecCCCCceEEEE-eccC-CEEEEEECCCCCCCEEEEEeCCCC
Confidence 8999999874212 455555555555554 4777 45554444 345999998764
No 193
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.73 E-value=2.1e-06 Score=75.97 Aligned_cols=157 Identities=6% Similarity=-0.057 Sum_probs=109.7
Q ss_pred CCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCC
Q 018322 164 HQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTG 243 (358)
Q Consensus 164 H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~ 243 (358)
+...+..+.+.+++ .++++...++.|..|+..... ....+......+.+|++.+++.
T Consensus 55 ~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~g~~---------------------~~~~~~~~~~~~~~i~~~~~g~- 111 (299)
T 2z2n_A 55 PDAKVMCLTISSDG-EVWFTENAANKIGRITKKGII---------------------KEYTLPNPDSAPYGITEGPNGD- 111 (299)
T ss_dssp TTCCEEEEEECTTS-CEEEEETTTTEEEEECTTSCE---------------------EEEECSSTTCCEEEEEECTTSC-
T ss_pred ccCceeeEEECCCC-CEEEeCCCCCeEEEECCCCcE---------------------EEEeCCCcCCCceeeEECCCCC-
Confidence 45788999999988 677776667889999875311 0111122345788999999886
Q ss_pred eEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEecCCCCe
Q 018322 244 RLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADV 323 (358)
Q Consensus 244 ~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V 323 (358)
++++...++.|.+||. + +.... .....+...+..+++.+++. ++++...++.|..||. ++.........+...+
T Consensus 112 l~v~~~~~~~i~~~d~-~-g~~~~--~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~ 185 (299)
T 2z2n_A 112 IWFTEMNGNRIGRITD-D-GKIRE--YELPNKGSYPSFITLGSDNA-LWFTENQNNAIGRITE-SGDITEFKIPTPASGP 185 (299)
T ss_dssp EEEEETTTTEEEEECT-T-CCEEE--EECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECT-TCCEEEEECSSTTCCE
T ss_pred EEEEecCCceEEEECC-C-CCEEE--ecCCCCCCCCceEEEcCCCC-EEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcc
Confidence 7777667889999998 4 22211 11222345789999999987 8877777889999998 5331111123345568
Q ss_pred EEEEEeCCCCcEEEEEeCCCCEEEEeC
Q 018322 324 NVISWNRLASCLLASGSDDGTFSIHDL 350 (358)
Q Consensus 324 ~~i~~~p~~~~~lasgs~Dg~i~iwDl 350 (358)
..+++.+++ .++++...++.|.+||.
T Consensus 186 ~~i~~~~~g-~l~v~~~~~~~i~~~~~ 211 (299)
T 2z2n_A 186 VGITKGNDD-ALWFVEIIGNKIGRITT 211 (299)
T ss_dssp EEEEECTTS-SEEEEETTTTEEEEECT
T ss_pred eeEEECCCC-CEEEEccCCceEEEECC
Confidence 899999998 77777767789999998
No 194
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.72 E-value=5.5e-07 Score=91.31 Aligned_cols=218 Identities=11% Similarity=0.026 Sum_probs=127.5
Q ss_pred CceeeeChhHHHhhhcccccCcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCCC
Q 018322 47 GEELQCDPTAYNSLHAFHIGWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNKP 126 (358)
Q Consensus 47 ~~~l~~~~~~Y~~~~~~~~~wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~~ 126 (358)
.++...|+....--+ .|..-++.|.||+ .+|+.+....+.+...|+|+++..
T Consensus 147 ~~~~lld~~~l~~~~----~~~~~~~~~SPDG-----------~~la~~~~~~G~e~~~i~v~dl~t------------- 198 (741)
T 1yr2_A 147 KGRVLLDPNTWAKDG----ATALDAWAASDDG-----------RLLAYSVQDGGSDWRTVKFVGVAD------------- 198 (741)
T ss_dssp CCEEEECGGGCC--------EEEEEEEECTTS-----------SEEEEEEEETTCSEEEEEEEETTT-------------
T ss_pred CCEEEECHHHhccCC----CEEEEeEEECCCC-----------CEEEEEEcCCCCceEEEEEEECCC-------------
Confidence 345555664432222 2555678888986 366666655555556788887621
Q ss_pred CCCCCCCCCCCCCCCCCCCCccCCCCCCCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCCC--------------cEEE
Q 018322 127 SNDDEDVDSESSDSDEDSDDDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTG--------------HVQV 192 (358)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg--------------~V~i 192 (358)
...+... .+...+..+.|+|+ ..++.+ +.++ .|++
T Consensus 199 ---------------------------g~~~~~~--~~~~~~~~~~wspD-~~l~~~-~~~~~~~~~~~~~~~~~~~v~~ 247 (741)
T 1yr2_A 199 ---------------------------GKPLADE--LKWVKFSGLAWLGN-DALLYS-RFAEPKEGQAFQALNYNQTVWL 247 (741)
T ss_dssp ---------------------------CCEEEEE--EEEEESCCCEESTT-SEEEEE-ECCCC--------CCCCCEEEE
T ss_pred ---------------------------CCCCCcc--CCCceeccEEEECC-CEEEEE-EecCcccccccccCCCCCEEEE
Confidence 1111111 11222467899998 555544 4443 3888
Q ss_pred EeCCCCccccccccccccCCCCCCCCCCCcEEEcC--CCCCeEEEEeCCCCCCeEEEEeCC-----CcEEEEecCCCC-C
Q 018322 193 WDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGG--HKDEGYAIDWNPITTGRLVTGDCN-----SCIYLWEPASDA-T 264 (358)
Q Consensus 193 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~l~~s~~~~~~l~sgs~d-----g~I~lwd~~~~~-~ 264 (358)
|++.... ......+.. +...+.++.|+|++. +|+..+.+ ..|++||+.++. .
T Consensus 248 ~~lgt~~-------------------~~~~lv~~~~~~~~~~~~~~~SpDG~-~l~~~~~~~~~~~~~l~~~d~~~~~~~ 307 (741)
T 1yr2_A 248 HRLGTPQ-------------------SADQPVFATPELPKRGHGASVSSDGR-WVVITSSEGTDPVNTVHVARVTNGKIG 307 (741)
T ss_dssp EETTSCG-------------------GGCEEEECCTTCTTCEEEEEECTTSC-EEEEEEECTTCSCCEEEEEEEETTEEC
T ss_pred EECCCCc-------------------hhCEEEeccCCCCeEEEEEEECCCCC-EEEEEEEccCCCcceEEEEECCCCCCc
Confidence 9886521 111223332 333588999999998 77766644 389999997641 2
Q ss_pred -cccCCCccccCCCcEEEEEECCCCCCEEEEEECC----CcEEEEECCCCC-CeeEEEecCCCCeEEEEEeCCCCcEEEE
Q 018322 265 -WNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVD----GHIAIWDTRVGK-SALTSFKAHNADVNVISWNRLASCLLAS 338 (358)
Q Consensus 265 -~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~D----g~I~iwD~r~~~-~~~~~~~~h~~~V~~i~~~p~~~~~las 338 (358)
+ ..+..+...+.... +|++. .|+..+.+ +.|.+||+..+. .....+..+...+..++|. .+ .++++
T Consensus 308 ~~----~~l~~~~~~~~~~~-~~dg~-~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~-~lv~~ 379 (741)
T 1yr2_A 308 PV----TALIPDLKAQWDFV-DGVGD-QLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GN-RLFAS 379 (741)
T ss_dssp CC----EEEECSSSSCEEEE-EEETT-EEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BT-EEEEE
T ss_pred cc----EEecCCCCceEEEE-eccCC-EEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CC-EEEEE
Confidence 2 23444444455543 48887 66666653 459999987641 2222233444456678887 44 78899
Q ss_pred EeCCCCEEEEeCC
Q 018322 339 GSDDGTFSIHDLR 351 (358)
Q Consensus 339 gs~Dg~i~iwDlr 351 (358)
...|+..+||.+.
T Consensus 380 ~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 380 YIHDAKSQVLAFD 392 (741)
T ss_dssp EEETTEEEEEEEE
T ss_pred EEECCEEEEEEEe
Confidence 9999987777543
No 195
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.72 E-value=1.9e-07 Score=94.07 Aligned_cols=165 Identities=10% Similarity=0.060 Sum_probs=106.0
Q ss_pred CCCceeEEEEcCCCCcEEEEEe----CCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcE-EEcCCCCCeEEEEeC
Q 018322 164 HQGCVNRIRAMTQNPHICASWA----DTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLV-KFGGHKDEGYAIDWN 238 (358)
Q Consensus 164 H~~~V~~i~~~p~~~~~lat~s----~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~h~~~v~~l~~s 238 (358)
|...+..++|+|++..++.+.+ +..+|++||+.+ +..+. .+.+ ....+++|+
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~t---------------------g~~~~~~~~~--~k~~~~~Ws 183 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVES---------------------KQPLETPLKD--VKFSGISWL 183 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTT---------------------CSEEEEEEEE--EESCCCEEE
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCC---------------------CCCCccccCC--ceeccEEEe
Confidence 5567888899999943443333 335799999987 22222 1111 112478899
Q ss_pred CCCCCeEEEEeCCC-------------cEEEEecCCCCCcccCCCcccc-CCCcEEEEEECCCCCCEEEEEECC---CcE
Q 018322 239 PITTGRLVTGDCNS-------------CIYLWEPASDATWNVDPNPFIG-HSASVEDLQWSPTEPDVFASCSVD---GHI 301 (358)
Q Consensus 239 ~~~~~~l~sgs~dg-------------~I~lwd~~~~~~~~~~~~~~~~-h~~~V~~v~~sp~~~~~las~s~D---g~I 301 (358)
++. .|+.++.+. .|++|++.+.......+..... |...+.++.|+|+++.++++.+.+ ..|
T Consensus 184 -Dg~-~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i 261 (693)
T 3iuj_A 184 -GNE-GFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRL 261 (693)
T ss_dssp -TTT-EEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEE
T ss_pred -CCC-EEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEE
Confidence 998 677666663 3999998764321111122233 445578899999999666665533 589
Q ss_pred EEEECCCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCC---CCEEEEeCCCCC
Q 018322 302 AIWDTRVGKSALTSFKAHNADVNVISWNRLASCLLASGSDD---GTFSIHDLRLLK 354 (358)
Q Consensus 302 ~iwD~r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~D---g~i~iwDlr~~~ 354 (358)
+++|+..+......+..+....... |.+++..++++...+ +.|.++|+.++.
T Consensus 262 ~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~ 316 (693)
T 3iuj_A 262 YVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPG 316 (693)
T ss_dssp EEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCC
T ss_pred EEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCC
Confidence 9999987544556666666666555 666664677776554 679999998764
No 196
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.71 E-value=1.4e-07 Score=85.88 Aligned_cols=145 Identities=10% Similarity=0.091 Sum_probs=89.7
Q ss_pred CceeEEEEcCCCCcEEEEEeCC---Cc--EEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCC
Q 018322 166 GCVNRIRAMTQNPHICASWADT---GH--VQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPI 240 (358)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~d---g~--V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~ 240 (358)
..+..++|+|++ ..||..+.+ +. |.+|++.. .........+ . +.+++|+|+
T Consensus 59 ~~~~~~~~SpDg-~~la~~~~~~~~~~~~l~~~~~~~---------------------g~~~~l~~~~-~-~~~~~wspd 114 (347)
T 2gop_A 59 ENATMPRISPDG-KKIAFMRANEEKKVSEIWVADLET---------------------LSSKKILEAK-N-IRSLEWNED 114 (347)
T ss_dssp ESCEEEEECTTS-SEEEEEEEETTTTEEEEEEEETTT---------------------TEEEEEEEES-E-EEEEEECTT
T ss_pred ccCCCeEECCCC-CEEEEEEeccCCCcceEEEEECCC---------------------CceEEEEcCC-C-ccceeECCC
Confidence 568899999999 556655543 33 77777765 2222222222 3 899999999
Q ss_pred CCCeEEEEeC---------------------------CCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEE
Q 018322 241 TTGRLVTGDC---------------------------NSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFA 293 (358)
Q Consensus 241 ~~~~l~sgs~---------------------------dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~la 293 (358)
+. .|+.++. ...|++|++.++ ... ..+.. . .+..++|+|++ +++
T Consensus 115 g~-~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~-~~~---~~l~~-~-~~~~~~~spdg--~~~ 185 (347)
T 2gop_A 115 SR-KLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESE-EVI---EEFEK-P-RFSSGIWHRDK--IVV 185 (347)
T ss_dssp SS-EEEEEEECCCC---------CCCC---------CEEEEEEEETTTT-EEE---EEEEE-E-TTCEEEEETTE--EEE
T ss_pred CC-EEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCC-eEE---eeecC-C-CcccccCCCCe--EEE
Confidence 98 7777653 257899998763 321 12222 2 68889999998 666
Q ss_pred EEECCC-------cEEEEECCCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCC--------CCEEEEe
Q 018322 294 SCSVDG-------HIAIWDTRVGKSALTSFKAHNADVNVISWNRLASCLLASGSDD--------GTFSIHD 349 (358)
Q Consensus 294 s~s~Dg-------~I~iwD~r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~D--------g~i~iwD 349 (358)
++..++ ...||.+.+ . ....+..+ ..+..+ +|+| ..|+.++.+ ..|.+||
T Consensus 186 ~~~~~~~~~~~~~~~~l~~~d~-~-~~~~l~~~-~~~~~~--spdg-~~l~~~~~~~~~~~~~~~~l~~~d 250 (347)
T 2gop_A 186 NVPHREIIPQYFKFWDIYIWED-G-KEEKMFEK-VSFYAV--DSDG-ERILLYGKPEKKYMSEHNKLYIYD 250 (347)
T ss_dssp EEECCCSSCCSSCCEEEEEEET-T-EEEEEEEE-ESEEEE--EECS-SCEEEEECCSSSCCCSSCEEEEEC
T ss_pred EEecccccccccccccEEEeCC-C-ceEEeccC-cceeeE--CCCC-CEEEEEEccccCCccccceEEEEC
Confidence 665542 345554443 2 33444444 445444 9999 666555533 3688887
No 197
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.71 E-value=2.7e-07 Score=82.13 Aligned_cols=142 Identities=8% Similarity=-0.008 Sum_probs=104.8
Q ss_pred cEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCC-CCeEEEEeCCCCCCeEEEEeCCCcEEEE
Q 018322 179 HICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHK-DEGYAIDWNPITTGRLVTGDCNSCIYLW 257 (358)
Q Consensus 179 ~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~s~~~~~~l~sgs~dg~I~lw 257 (358)
++|++++.++.|++||..+ .+.+..+..+. ..+.++.++|++. +|+ +.++.|..|
T Consensus 6 ~~lv~~~~~~~v~~~d~~t---------------------G~~~w~~~~~~~~~~~~~~~~pdG~-ilv--s~~~~V~~~ 61 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINKDT---------------------KEIVWEYPLEKGWECNSVAATKAGE-ILF--SYSKGAKMI 61 (276)
T ss_dssp EEEEECTTCSEEEEEETTT---------------------TEEEEEEECCTTCCCCEEEECTTSC-EEE--ECBSEEEEE
T ss_pred cEEEeeCCCCEEEEEECCC---------------------CeEEEEeCCCccCCCcCeEECCCCC-EEE--eCCCCEEEE
Confidence 5899999999999999865 46667777665 4788999999997 777 347789999
Q ss_pred ecCCCCCcccCCCccccC-CCcEEEEEECCCCCCEEEEEEC-CCcEEEEECCCCCCeeEEEec------CCCCeEEEEEe
Q 018322 258 EPASDATWNVDPNPFIGH-SASVEDLQWSPTEPDVFASCSV-DGHIAIWDTRVGKSALTSFKA------HNADVNVISWN 329 (358)
Q Consensus 258 d~~~~~~~~~~~~~~~~h-~~~V~~v~~sp~~~~~las~s~-Dg~I~iwD~r~~~~~~~~~~~------h~~~V~~i~~~ 329 (358)
|. + ++.. ..+..+ ...+.++++.|++. ++++.+. .+.|..+|. .+ +.+..+.. +......+++.
T Consensus 62 d~-~-G~~~---W~~~~~~~~~~~~~~~~~dG~-~lv~~~~~~~~v~~vd~-~G-k~l~~~~~~~~~~~~~~~~~~v~~~ 133 (276)
T 3no2_A 62 TR-D-GREL---WNIAAPAGCEMQTARILPDGN-ALVAWCGHPSTILEVNM-KG-EVLSKTEFETGIERPHAQFRQINKN 133 (276)
T ss_dssp CT-T-SCEE---EEEECCTTCEEEEEEECTTSC-EEEEEESTTEEEEEECT-TS-CEEEEEEECCSCSSGGGSCSCCEEC
T ss_pred CC-C-CCEE---EEEcCCCCccccccEECCCCC-EEEEecCCCCEEEEEeC-CC-CEEEEEeccCCCCcccccccCceEC
Confidence 98 4 3322 334333 35688999999998 7777776 777887775 33 44544431 11235566789
Q ss_pred CCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 330 RLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 330 p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
+++ .+|++...++.|.+||.. ++
T Consensus 134 ~~G-~~lv~~~~~~~v~~~d~~-G~ 156 (276)
T 3no2_A 134 KKG-NYLVPLFATSEVREIAPN-GQ 156 (276)
T ss_dssp TTS-CEEEEETTTTEEEEECTT-SC
T ss_pred CCC-CEEEEecCCCEEEEECCC-CC
Confidence 999 899999999999999986 54
No 198
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.70 E-value=5.6e-06 Score=81.17 Aligned_cols=225 Identities=11% Similarity=0.062 Sum_probs=143.6
Q ss_pred CCCceeeeChhHHHhhhcccccCcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCC
Q 018322 45 EEGEELQCDPTAYNSLHAFHIGWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPN 124 (358)
Q Consensus 45 ~~~~~l~~~~~~Y~~~~~~~~~wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~ 124 (358)
..+....+|......+.++.+.+-.-.+.+-||+ .|+.++. .++.|.++++..
T Consensus 175 ~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDG-----------r~lyv~~-----~dg~V~viD~~~----------- 227 (567)
T 1qks_A 175 DAGQIALIDGSTYEIKTVLDTGYAVHISRLSASG-----------RYLFVIG-----RDGKVNMIDLWM----------- 227 (567)
T ss_dssp TTTEEEEEETTTCCEEEEEECSSCEEEEEECTTS-----------CEEEEEE-----TTSEEEEEETTS-----------
T ss_pred CCCeEEEEECCCCeEEEEEeCCCCccceEECCCC-----------CEEEEEc-----CCCeEEEEECCC-----------
Confidence 4566777887777777777777655567777775 2444444 346888887620
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCccCCCCCCCeEEEEEecCCCceeEEEEc----CCCCcEEEEEeCCCcEEEEeCCCCcc
Q 018322 125 KPSNDDEDVDSESSDSDEDSDDDEEGGSGTPILQLRKVAHQGCVNRIRAM----TQNPHICASWADTGHVQVWDLRSHLN 200 (358)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~V~~i~~~----p~~~~~lat~s~dg~V~iwd~~~~~~ 200 (358)
.......+ +........+.|+ |++..++++....++|.|+|..+
T Consensus 228 ----------------------------~t~~~v~~-i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t--- 275 (567)
T 1qks_A 228 ----------------------------KEPTTVAE-IKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGET--- 275 (567)
T ss_dssp ----------------------------SSCCEEEE-EECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTT---
T ss_pred ----------------------------CCCcEeEE-EecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCC---
Confidence 01112122 2223456789999 68866666666779999999766
Q ss_pred ccccccccccCCCCCCCCCCCcEEEcC----------CCC-CeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCC
Q 018322 201 ALAESETIVGQGAPQVSNQSPLVKFGG----------HKD-EGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDP 269 (358)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------h~~-~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~ 269 (358)
.+++..+.. |.. .+.++..++.+..++++....|.|.++|........ .
T Consensus 276 ------------------~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~--v 335 (567)
T 1qks_A 276 ------------------LEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLK--T 335 (567)
T ss_dssp ------------------CCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEE--E
T ss_pred ------------------CcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccce--e
Confidence 333333321 212 577888888877456666778999999986532111 1
Q ss_pred CccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEec-----CCC-CeEEEEEeCCCCcEEEEEe-CC
Q 018322 270 NPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKA-----HNA-DVNVISWNRLASCLLASGS-DD 342 (358)
Q Consensus 270 ~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~-----h~~-~V~~i~~~p~~~~~lasgs-~D 342 (358)
.. ........++.|+|+++++++++..++.|.++|+.++ +.+..+.. |.. .++ + ++|++..+++++. .+
T Consensus 336 ~~-i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~-kl~~~i~vgg~~Phpg~g~~-~-~~p~~g~v~~t~~~g~ 411 (567)
T 1qks_A 336 TE-ISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEG-KLVAIEDTGGQTPHPGRGAN-F-VHPTFGPVWATSHMGD 411 (567)
T ss_dssp EE-EECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTT-EEEEEEECSSSSBCCTTCEE-E-EETTTEEEEEEEBSSS
T ss_pred ee-eeccccccCceECCCCCEEEEEeCCCCeEEEEECCCC-cEEEEEeccCcCCCCcccee-e-ECCCCCcEEEeCCCCC
Confidence 11 1233457789999999966677778899999999985 34444432 432 233 2 5887536666664 46
Q ss_pred CCEEEEeCCC
Q 018322 343 GTFSIHDLRL 352 (358)
Q Consensus 343 g~i~iwDlr~ 352 (358)
+.|.++|...
T Consensus 412 ~~Vsvid~~~ 421 (567)
T 1qks_A 412 DSVALIGTDP 421 (567)
T ss_dssp SEEEEEECCT
T ss_pred CeEEEecCCC
Confidence 8999999987
No 199
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.67 E-value=1.1e-06 Score=78.60 Aligned_cols=162 Identities=6% Similarity=0.052 Sum_probs=108.0
Q ss_pred CceeEEEEcCCCCcEEEEEeCC---------------CcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCC
Q 018322 166 GCVNRIRAMTQNPHICASWADT---------------GHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKD 230 (358)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~d---------------g~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 230 (358)
..++.+.+.+++ .+.++...+ +.|..|+... .. ..+..+..
T Consensus 117 ~~~~~i~~d~~g-~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g----------------------~~-~~~~~~~~ 172 (314)
T 1pjx_A 117 QGCNDCAFDYEG-NLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDG----------------------QM-IQVDTAFQ 172 (314)
T ss_dssp BCCCEEEECTTS-CEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTS----------------------CE-EEEEEEES
T ss_pred cCCcCEEECCCC-CEEEEecCcccccccccccccCCCCeEEEECCCC----------------------CE-EEeccCCC
Confidence 358899999988 566665544 4566665432 11 11222233
Q ss_pred CeEEEEeC----CCCCCeEEEEeCCCcEEEEecCCCCCccc--CCCccccCC-CcEEEEEECCCCCCEEEEEECCCcEEE
Q 018322 231 EGYAIDWN----PITTGRLVTGDCNSCIYLWEPASDATWNV--DPNPFIGHS-ASVEDLQWSPTEPDVFASCSVDGHIAI 303 (358)
Q Consensus 231 ~v~~l~~s----~~~~~~l~sgs~dg~I~lwd~~~~~~~~~--~~~~~~~h~-~~V~~v~~sp~~~~~las~s~Dg~I~i 303 (358)
...+++|+ +++..++++...++.|.+|++...+.... ....+..+. ..+..+++++++. ++++...++.|.+
T Consensus 173 ~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~~~~~~i~~ 251 (314)
T 1pjx_A 173 FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNN-LLVANWGSSHIEV 251 (314)
T ss_dssp SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCC-EEEEEETTTEEEE
T ss_pred CcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCC-EEEEEcCCCEEEE
Confidence 56789999 98862344545678999999862222100 011223333 5678899999997 8888888999999
Q ss_pred EECCCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCC
Q 018322 304 WDTRVGKSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLL 353 (358)
Q Consensus 304 wD~r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~ 353 (358)
||..++ ..+..+..+...+.+++|++++..++++...++.|..|++...
T Consensus 252 ~d~~~g-~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 252 FGPDGG-QPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp ECTTCB-SCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred EcCCCC-cEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 998854 3455566666789999999999336666667789999998753
No 200
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.61 E-value=8.9e-06 Score=76.49 Aligned_cols=156 Identities=10% Similarity=-0.040 Sum_probs=101.6
Q ss_pred EEEcCCCCcEEEEEeCCC--cEEEEeCCCCccccccccccccCCCCCCCCCCCcEEE----cCCCCCeEEEEeCCCCCCe
Q 018322 171 IRAMTQNPHICASWADTG--HVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF----GGHKDEGYAIDWNPITTGR 244 (358)
Q Consensus 171 i~~~p~~~~~lat~s~dg--~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~h~~~v~~l~~s~~~~~~ 244 (358)
+.|++++ ..|+++..++ .|.+|+.... .....+ ........+++++|.+. .
T Consensus 176 ia~~~~g-~~l~~~d~~~~~~I~~~d~~~~---------------------~~~~~~g~~~~~~~~~p~~iav~p~~g-~ 232 (409)
T 3hrp_A 176 PAVTKDK-QRVYSIGWEGTHTVYVYMKASG---------------------WAPTRIGQLGSTFSGKIGAVALDETEE-W 232 (409)
T ss_dssp CEECTTS-SEEEEEBSSTTCEEEEEEGGGT---------------------TCEEEEEECCTTSCSCCCBCEECTTSS-E
T ss_pred eeEecCC-CcEEEEecCCCceEEEEEcCCC---------------------ceeEEeeeccchhcCCcEEEEEeCCCC-e
Confidence 8999998 5666666655 6888876541 111122 11345677899999554 6
Q ss_pred EEEEeCCCcEEEEecCCCCCcccCCCccccCCCc--EEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEecCC--
Q 018322 245 LVTGDCNSCIYLWEPASDATWNVDPNPFIGHSAS--VEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHN-- 320 (358)
Q Consensus 245 l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~--V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~-- 320 (358)
|+.+..++.|+.||...............++... ...++|+|++..++++-...+.|+.|+.... +..+.++.
T Consensus 233 lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~---~~~~~g~~~~ 309 (409)
T 3hrp_A 233 LYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE---CEWFCGSATQ 309 (409)
T ss_dssp EEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC---EEEEEECTTC
T ss_pred EEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC---EEEEEeCCCC
Confidence 6667778999999987633211100001122222 2389999965548888888899999987642 33333332
Q ss_pred -------------CCeEEEEEeCCCCcEEEEEe-CCCCEEEEeCCCC
Q 018322 321 -------------ADVNVISWNRLASCLLASGS-DDGTFSIHDLRLL 353 (358)
Q Consensus 321 -------------~~V~~i~~~p~~~~~lasgs-~Dg~i~iwDlr~~ 353 (358)
...+.|+|.+++ .++++-+ .++.|+.||+.++
T Consensus 310 ~g~~dg~~~~~~~~~P~gia~d~dG-~lyvad~~~~~~I~~~~~~~G 355 (409)
T 3hrp_A 310 KTVQDGLREEALFAQPNGMTVDEDG-NFYIVDGFKGYCLRKLDILDG 355 (409)
T ss_dssp CSCBCEEGGGCBCSSEEEEEECTTC-CEEEEETTTTCEEEEEETTTT
T ss_pred CCcCCCcccccEeCCCeEEEEeCCC-CEEEEeCCCCCEEEEEECCCC
Confidence 347899999999 7888877 8899999996544
No 201
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.61 E-value=4.5e-06 Score=75.94 Aligned_cols=157 Identities=6% Similarity=-0.090 Sum_probs=104.1
Q ss_pred cCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCC-----CCeEEEEe
Q 018322 163 AHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHK-----DEGYAIDW 237 (358)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-----~~v~~l~~ 237 (358)
........+.+++++ .++++...++.|.+||.... +....+.... .....|++
T Consensus 81 ~~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~---------------------~~~~~i~~g~~~~~~~~p~~i~~ 138 (328)
T 3dsm_A 81 TGFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTY---------------------EITGYIECPDMDMESGSTEQMVQ 138 (328)
T ss_dssp ECCSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTT---------------------EEEEEEECTTCCTTTCBCCCEEE
T ss_pred CCCCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCC---------------------eEEEEEEcCCccccCCCcceEEE
Confidence 345778899998888 67777658899999998762 2222222111 14456677
Q ss_pred CCCCCCeEEEEe--CCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECC----------CcEEEEE
Q 018322 238 NPITTGRLVTGD--CNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVD----------GHIAIWD 305 (358)
Q Consensus 238 s~~~~~~l~sgs--~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~D----------g~I~iwD 305 (358)
.+. .|++++ .++.|.+||+.+... . ..+.. ......+.++|++. +++++..+ +.|.++|
T Consensus 139 --~~~-~lyv~~~~~~~~v~viD~~t~~~-~---~~i~~-g~~p~~i~~~~dG~-l~v~~~~~~~~~~~~~~~~~v~~id 209 (328)
T 3dsm_A 139 --YGK-YVYVNCWSYQNRILKIDTETDKV-V---DELTI-GIQPTSLVMDKYNK-MWTITDGGYEGSPYGYEAPSLYRID 209 (328)
T ss_dssp --ETT-EEEEEECTTCCEEEEEETTTTEE-E---EEEEC-SSCBCCCEECTTSE-EEEEBCCBCTTCSSCBCCCEEEEEE
T ss_pred --ECC-EEEEEcCCCCCEEEEEECCCCeE-E---EEEEc-CCCccceEEcCCCC-EEEEECCCccCCccccCCceEEEEE
Confidence 333 555554 488999999977422 2 12221 23456789999998 77776654 7899999
Q ss_pred CCCCCCeeEEEecC-CCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 306 TRVGKSALTSFKAH-NADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 306 ~r~~~~~~~~~~~h-~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
..+. .....+... ....+.++|+|++ ..|+.+.. .|.+||+.+.+
T Consensus 210 ~~t~-~v~~~~~~~~g~~p~~la~~~d~-~~lyv~~~--~v~~~d~~t~~ 255 (328)
T 3dsm_A 210 AETF-TVEKQFKFKLGDWPSEVQLNGTR-DTLYWINN--DIWRMPVEADR 255 (328)
T ss_dssp TTTT-EEEEEEECCTTCCCEEEEECTTS-CEEEEESS--SEEEEETTCSS
T ss_pred CCCC-eEEEEEecCCCCCceeEEEecCC-CEEEEEcc--EEEEEECCCCc
Confidence 9874 344444322 3468999999998 56655543 89999998765
No 202
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.57 E-value=1e-05 Score=71.45 Aligned_cols=158 Identities=6% Similarity=-0.014 Sum_probs=110.1
Q ss_pred cCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCC
Q 018322 163 AHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITT 242 (358)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~ 242 (358)
.....+.+|.+.+++ .+.++...++.|.+||..... . ...+..+...+.+|++.+++.
T Consensus 17 ~~~~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~~~~--------------------~-~~~~~~~~~~~~~i~~~~~g~ 74 (300)
T 2qc5_A 17 IPDSGPYGITSSEDG-KVWFTQHKANKISSLDQSGRI--------------------K-EFEVPTPDAKVMCLIVSSLGD 74 (300)
T ss_dssp STTCCEEEEEECTTS-CEEEEETTTTEEEEECTTSCE--------------------E-EEECSSTTCCEEEEEECTTSC
T ss_pred CCCCCcceeeECCCC-CEEEEcCCCCeEEEECCCCce--------------------E-EEECCCCCCcceeEEECCCCC
Confidence 345688999999998 677776678899999976311 0 011223335788999998886
Q ss_pred CeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEecCCCC
Q 018322 243 GRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNAD 322 (358)
Q Consensus 243 ~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~ 322 (358)
++++...++.|..||.. +.... .........+.++++.+++. ++++...++.|..||.. +......+......
T Consensus 75 -l~v~~~~~~~v~~~d~~--g~~~~--~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~ 147 (300)
T 2qc5_A 75 -IWFTENGANKIGKLSKK--GGFTE--YPLPQPDSGPYGITEGLNGD-IWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSY 147 (300)
T ss_dssp -EEEEETTTTEEEEECTT--SCEEE--EECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECTT-SCEEEEECSSTTCC
T ss_pred -EEEEecCCCeEEEECCC--CCeEE--ecCCCCCCCCccceECCCCC-EEEEccCCCeEEEECCC-CCEEEccCCCCCCC
Confidence 66666667889999976 22211 11222346789999999887 88777778899999987 33221222334567
Q ss_pred eEEEEEeCCCCcEEEEEeCCCCEEEEeC
Q 018322 323 VNVISWNRLASCLLASGSDDGTFSIHDL 350 (358)
Q Consensus 323 V~~i~~~p~~~~~lasgs~Dg~i~iwDl 350 (358)
++.+++.+++ .++++...++.|.+||.
T Consensus 148 ~~~i~~d~~g-~l~v~~~~~~~i~~~~~ 174 (300)
T 2qc5_A 148 PAFITLGSDN-ALWFTENQNNSIGRITN 174 (300)
T ss_dssp EEEEEECTTS-SEEEEETTTTEEEEECT
T ss_pred ceeEEECCCC-CEEEEecCCCeEEEECC
Confidence 8999999999 77777766788999987
No 203
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.56 E-value=1.3e-06 Score=80.73 Aligned_cols=161 Identities=11% Similarity=0.016 Sum_probs=102.7
Q ss_pred EEecCCCceeEEEEcCCCCcEEEEEe----------CCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcC--
Q 018322 160 RKVAHQGCVNRIRAMTQNPHICASWA----------DTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGG-- 227 (358)
Q Consensus 160 ~~~~H~~~V~~i~~~p~~~~~lat~s----------~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 227 (358)
....+.++ .+.|+|++. ++.+++ .++.|.+||... .+.+..+..
T Consensus 46 ~i~~g~~p--~i~~spdg~-~lyv~~~~~~~~~~g~~~~~v~v~d~~t---------------------~~~~~~i~~~~ 101 (361)
T 2oiz_A 46 MVPTAFNG--HVQVSNDGK-KIYTMTTYHERITRGKRSDVVEVWDADK---------------------LTFEKEISLPP 101 (361)
T ss_dssp EEECCEEE--EEEECTTSS-EEEEEEEEETTSSSSCEEEEEEEEETTT---------------------CCEEEEEEECT
T ss_pred EecCCCCC--ceEECCCCC-EEEEEEecccccccCCCCCEEEEEECcC---------------------CcEEEEEEcCc
Confidence 33344444 899999994 555544 367899999875 334444332
Q ss_pred ----CCCCeEEEEeCCCCCCeEEEEeC--CCcEEEEecCCCCCcccCCCc-cccCCCcEEEEEECCCCCCEEEEEECCCc
Q 018322 228 ----HKDEGYAIDWNPITTGRLVTGDC--NSCIYLWEPASDATWNVDPNP-FIGHSASVEDLQWSPTEPDVFASCSVDGH 300 (358)
Q Consensus 228 ----h~~~v~~l~~s~~~~~~l~sgs~--dg~I~lwd~~~~~~~~~~~~~-~~~h~~~V~~v~~sp~~~~~las~s~Dg~ 300 (358)
+......++++|++. +|+++.. ++.|.+||+.+. +.. .. +. + .....+.+.|.+...+++.+.||.
T Consensus 102 ~~~~~g~~p~~i~~spdg~-~l~v~n~~~~~~v~v~d~~~~-~~~---~~~i~-~-~~~~~v~~~p~~~~~~~~~~~dg~ 174 (361)
T 2oiz_A 102 KRVQGLNYDGLFRQTTDGK-FIVLQNASPATSIGIVDVAKG-DYV---EDVTA-A-AGCWSVIPQPNRPRSFMTICGDGG 174 (361)
T ss_dssp TBCCBCCCGGGEEECTTSS-EEEEEEESSSEEEEEEETTTT-EEE---EEEGG-G-TTEEEEEECTTSSSEEEEEETTSS
T ss_pred cccccCCCcceEEECCCCC-EEEEECCCCCCeEEEEECCCC-cEE---EEEec-C-CCcceeEEcCCCCeeEEEECCCCc
Confidence 224567899999998 8887763 589999999874 222 22 21 1 122336678887668999999999
Q ss_pred EEEEECCCCCCeeEE------EecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCC
Q 018322 301 IAIWDTRVGKSALTS------FKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLL 353 (358)
Q Consensus 301 I~iwD~r~~~~~~~~------~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~ 353 (358)
+.+|++......... +..+..++ .+.+.+++ ..++..+.++.|.++|+...
T Consensus 175 ~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g-~~~~~~~~~~~v~v~d~~~~ 231 (361)
T 2oiz_A 175 LLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALDK-DKAHFVSYYGNVYSADFSGD 231 (361)
T ss_dssp EEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEECS-SEEEEEBTTSEEEEEECSSS
T ss_pred EEEEEECCCCcEeeeccccceEcCCCCce-EEEecccC-CEEEEEeCCCeEEEEEecCC
Confidence 999998753333211 11222222 23345666 55666678899999998643
No 204
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.56 E-value=2.8e-06 Score=85.51 Aligned_cols=224 Identities=12% Similarity=0.051 Sum_probs=135.5
Q ss_pred CCCCceeeeChhHHHhhhcccccCcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCC
Q 018322 44 LEEGEELQCDPTAYNSLHAFHIGWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVP 123 (358)
Q Consensus 44 ~~~~~~l~~~~~~Y~~~~~~~~~wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~ 123 (358)
+..++++-+|+.+..-=+.+ .--++.|-||+ .+|+.+....+.+...|+|+++..
T Consensus 110 ~~~~~~vllD~n~la~~~~~----~l~~~~~SpDg-----------~~lAy~~~~~G~~~~~i~v~dl~t---------- 164 (693)
T 3iuj_A 110 EGKPAEVFLDPNTLSPDGTT----ALDQLSFSRDG-----------RILAYSLSLAGSDWREIHLMDVES---------- 164 (693)
T ss_dssp TTSCCEEEECGGGGSTTSCC----EEEEEEECTTS-----------SEEEEEEECSSCCEEEEEEEETTT----------
T ss_pred CCCCcEEEEehhhccCCCcE----EEEEEEECCCC-----------CEEEEEEecCCCceEEEEEEECCC----------
Confidence 45567888888776444433 22356788886 477777776666667888887731
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCCC-------------cE
Q 018322 124 NKPSNDDEDVDSESSDSDEDSDDDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTG-------------HV 190 (358)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg-------------~V 190 (358)
...+...... .....+.|+ ++ ..|+.++.+. .|
T Consensus 165 ------------------------------g~~~~~~~~~--~k~~~~~Ws-Dg-~~l~y~~~~~~~~~~~~~~~~~~~v 210 (693)
T 3iuj_A 165 ------------------------------KQPLETPLKD--VKFSGISWL-GN-EGFFYSSYDKPDGSELSARTDQHKV 210 (693)
T ss_dssp ------------------------------CSEEEEEEEE--EESCCCEEE-TT-TEEEEEESSCCC-------CCCCEE
T ss_pred ------------------------------CCCCccccCC--ceeccEEEe-CC-CEEEEEEecCcccccccccCCCcEE
Confidence 1112111111 113567899 88 4555555553 39
Q ss_pred EEEeCCCCccccccccccccCCCCCCCCCCCcEEEc--C-CCCCeEEEEeCCCCCCeEE-EEeC---CCcEEEEecCCCC
Q 018322 191 QVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG--G-HKDEGYAIDWNPITTGRLV-TGDC---NSCIYLWEPASDA 263 (358)
Q Consensus 191 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-h~~~v~~l~~s~~~~~~l~-sgs~---dg~I~lwd~~~~~ 263 (358)
++|++.... ......+. . |.....++.|+|++. +|+ +.+. ...|++||+.++.
T Consensus 211 ~~~~lgt~~-------------------~~~~~v~~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~~i~~~d~~~~~ 270 (693)
T 3iuj_A 211 YFHRLGTAQ-------------------EDDRLVFGAIPAQHHRYVGATVTEDDR-FLLISAANSTSGNRLYVKDLSQEN 270 (693)
T ss_dssp EEEETTSCG-------------------GGCEEEESCSGGGCCSEEEEEECTTSC-EEEEEEESSSSCCEEEEEETTSTT
T ss_pred EEEECCCCc-------------------ccceEEEecCCCCCeEEEEEEEcCCCC-EEEEEEccCCCCcEEEEEECCCCC
Confidence 999987621 11222332 2 344577899999998 554 4332 3589999987643
Q ss_pred CcccCCCccccCCCcEEEEEECCCCCCEEEEEECC---CcEEEEECCCCCC-eeEEEecCCCCeEEEEEeCCCCcEEEEE
Q 018322 264 TWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVD---GHIAIWDTRVGKS-ALTSFKAHNADVNVISWNRLASCLLASG 339 (358)
Q Consensus 264 ~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~D---g~I~iwD~r~~~~-~~~~~~~h~~~V~~i~~~p~~~~~lasg 339 (358)
.. ...+..+....... |++++..+++....+ +.|.++|+..+.. ....+..|...+. .|++++..++++.
T Consensus 271 ~~---~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~ 344 (693)
T 3iuj_A 271 AP---LLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEY 344 (693)
T ss_dssp CC---CEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEE
T ss_pred Cc---eEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEE
Confidence 21 13445555555554 666666455555544 6799999987532 1345666766665 8888885555555
Q ss_pred eCCC--CEEEEeCCC
Q 018322 340 SDDG--TFSIHDLRL 352 (358)
Q Consensus 340 s~Dg--~i~iwDlr~ 352 (358)
..++ .|++||+..
T Consensus 345 ~~~g~~~l~~~d~~g 359 (693)
T 3iuj_A 345 MVDATARVEQFDYEG 359 (693)
T ss_dssp EETTEEEEEEECTTS
T ss_pred EECCeeEEEEEECCC
Confidence 5665 688998864
No 205
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.53 E-value=1e-05 Score=72.35 Aligned_cols=160 Identities=9% Similarity=-0.000 Sum_probs=103.3
Q ss_pred cCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCC
Q 018322 163 AHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITT 242 (358)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~ 242 (358)
.+..--.+..|+|.+..++++....+.|+.||.... . ...+ .....+.++++++++.
T Consensus 10 ~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~---------------------~-~~~~-~~~~~~~~i~~~~dG~ 66 (297)
T 3g4e_A 10 ENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTK---------------------Q-VQRV-TMDAPVSSVALRQSGG 66 (297)
T ss_dssp CCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTC---------------------C-EEEE-ECSSCEEEEEEBTTSS
T ss_pred cCCccccCCeEECCCCEEEEEECCCCEEEEEECCCC---------------------c-EEEE-eCCCceEEEEECCCCC
Confidence 344556688999976678888888999999998761 1 1222 2345789999999986
Q ss_pred CeEEEEeCCCcEEEEecCCCCCcccCCCcccc-CCCcEEEEEECCCCCCEEEEEECC---------CcEEEEECCCCCCe
Q 018322 243 GRLVTGDCNSCIYLWEPASDATWNVDPNPFIG-HSASVEDLQWSPTEPDVFASCSVD---------GHIAIWDTRVGKSA 312 (358)
Q Consensus 243 ~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~-h~~~V~~v~~sp~~~~~las~s~D---------g~I~iwD~r~~~~~ 312 (358)
++++ . ++.|.+||..++ ........... ....+++++++|++. ++++.... ....||.+.... .
T Consensus 67 -l~v~-~-~~~l~~~d~~~g-~~~~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~ 140 (297)
T 3g4e_A 67 -YVAT-I-GTKFCALNWKEQ-SAVVLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPDH-H 140 (297)
T ss_dssp -EEEE-E-TTEEEEEETTTT-EEEEEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTTS-C
T ss_pred -EEEE-E-CCeEEEEECCCC-cEEEEEecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECCC-C
Confidence 5554 4 568999998653 22110011111 234589999999998 66654321 234555554322 2
Q ss_pred eEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCC
Q 018322 313 LTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLR 351 (358)
Q Consensus 313 ~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr 351 (358)
+..+..+....+.++|+|++..++++.+.++.|.+||+.
T Consensus 141 ~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d 179 (297)
T 3g4e_A 141 VKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYD 179 (297)
T ss_dssp EEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEEC
T ss_pred EEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEecc
Confidence 233333445678999999994566777778899999873
No 206
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.53 E-value=5.2e-06 Score=75.42 Aligned_cols=153 Identities=10% Similarity=-0.027 Sum_probs=98.4
Q ss_pred ceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCeEE
Q 018322 167 CVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLV 246 (358)
Q Consensus 167 ~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~l~ 246 (358)
-.....|+|++..++.+....+.|.+||.... . ...+. ....+.++.|++++. +++
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~---------------------~-~~~~~-~~~~v~~i~~~~dg~-l~v 105 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASG---------------------R-KTVHA-LPFMGSALAKISDSK-QLI 105 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTT---------------------E-EEEEE-CSSCEEEEEEEETTE-EEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCC---------------------c-EEEEE-CCCcceEEEEeCCCe-EEE
Confidence 34678899986678888888899999998751 1 12222 235789999999875 555
Q ss_pred EEeCCCcEEEEecCCCCCcccCCCcccc-CCCcEEEEEECCCCCCEEEEEEC------CCcEEEEECCCCCCeeEEEecC
Q 018322 247 TGDCNSCIYLWEPASDATWNVDPNPFIG-HSASVEDLQWSPTEPDVFASCSV------DGHIAIWDTRVGKSALTSFKAH 319 (358)
Q Consensus 247 sgs~dg~I~lwd~~~~~~~~~~~~~~~~-h~~~V~~v~~sp~~~~~las~s~------Dg~I~iwD~r~~~~~~~~~~~h 319 (358)
+ +.+ .|.+||..++. .......... ....++++.++|++. ++++... .+.|..++ . . .+..+..+
T Consensus 106 ~-~~~-gl~~~d~~~g~-~~~~~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~~~~~~~l~~~~--~-g-~~~~~~~~ 177 (326)
T 2ghs_A 106 A-SDD-GLFLRDTATGV-LTLHAELESDLPGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVA--K-G-KVTKLFAD 177 (326)
T ss_dssp E-ETT-EEEEEETTTCC-EEEEECSSTTCTTEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEE--T-T-EEEEEEEE
T ss_pred E-ECC-CEEEEECCCCc-EEEEeeCCCCCCCCCCCCEEECCCCC-EEEEeCCCcCCCCceEEEEEe--C-C-cEEEeeCC
Confidence 4 444 49999986632 2110010011 124689999999998 6655432 24555555 3 2 23333334
Q ss_pred CCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCC
Q 018322 320 NADVNVISWNRLASCLLASGSDDGTFSIHDLR 351 (358)
Q Consensus 320 ~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr 351 (358)
....+.++|+|++..++++.+.++.|.+||+.
T Consensus 178 ~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~ 209 (326)
T 2ghs_A 178 ISIPNSICFSPDGTTGYFVDTKVNRLMRVPLD 209 (326)
T ss_dssp ESSEEEEEECTTSCEEEEEETTTCEEEEEEBC
T ss_pred CcccCCeEEcCCCCEEEEEECCCCEEEEEEcc
Confidence 44678999999994455666667899999985
No 207
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.53 E-value=9e-06 Score=73.92 Aligned_cols=153 Identities=7% Similarity=-0.008 Sum_probs=99.2
Q ss_pred ceeEEEEcCCCCcEEEEEe-CCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCeE
Q 018322 167 CVNRIRAMTQNPHICASWA-DTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRL 245 (358)
Q Consensus 167 ~V~~i~~~p~~~~~lat~s-~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~l 245 (358)
....+.+ ..+ .++++.. .++.|.+||+.. .+.+..+... .....+.+++++. ++
T Consensus 132 ~p~~i~~-~~~-~lyv~~~~~~~~v~viD~~t---------------------~~~~~~i~~g-~~p~~i~~~~dG~-l~ 186 (328)
T 3dsm_A 132 STEQMVQ-YGK-YVYVNCWSYQNRILKIDTET---------------------DKVVDELTIG-IQPTSLVMDKYNK-MW 186 (328)
T ss_dssp BCCCEEE-ETT-EEEEEECTTCCEEEEEETTT---------------------TEEEEEEECS-SCBCCCEECTTSE-EE
T ss_pred CcceEEE-ECC-EEEEEcCCCCCEEEEEECCC---------------------CeEEEEEEcC-CCccceEEcCCCC-EE
Confidence 4556666 333 5666554 488999999986 2233333322 2346788999886 66
Q ss_pred EEEeCC----------CcEEEEecCCCCCcccCCCcccc-CCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeE
Q 018322 246 VTGDCN----------SCIYLWEPASDATWNVDPNPFIG-HSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALT 314 (358)
Q Consensus 246 ~sgs~d----------g~I~lwd~~~~~~~~~~~~~~~~-h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~ 314 (358)
+++..+ +.|.++|..+. ... ..+.. .......++|+|++. .+..+.. .|.+||+.++.....
T Consensus 187 v~~~~~~~~~~~~~~~~~v~~id~~t~-~v~---~~~~~~~g~~p~~la~~~d~~-~lyv~~~--~v~~~d~~t~~~~~~ 259 (328)
T 3dsm_A 187 TITDGGYEGSPYGYEAPSLYRIDAETF-TVE---KQFKFKLGDWPSEVQLNGTRD-TLYWINN--DIWRMPVEADRVPVR 259 (328)
T ss_dssp EEBCCBCTTCSSCBCCCEEEEEETTTT-EEE---EEEECCTTCCCEEEEECTTSC-EEEEESS--SEEEEETTCSSCCSS
T ss_pred EEECCCccCCccccCCceEEEEECCCC-eEE---EEEecCCCCCceeEEEecCCC-EEEEEcc--EEEEEECCCCceeee
Confidence 666544 78999998763 221 12211 123688999999988 4444433 899999987432111
Q ss_pred E-EecCCCCeEEEEEeCCCCcEEEEE----eCCCCEEEEeCC
Q 018322 315 S-FKAHNADVNVISWNRLASCLLASG----SDDGTFSIHDLR 351 (358)
Q Consensus 315 ~-~~~h~~~V~~i~~~p~~~~~lasg----s~Dg~i~iwDlr 351 (358)
. +..+......|+++|++..++++. ..++.|.+||..
T Consensus 260 ~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 260 PFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp CSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred eeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 1 122245689999999554888887 678999999987
No 208
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.52 E-value=4.3e-06 Score=75.07 Aligned_cols=160 Identities=8% Similarity=-0.067 Sum_probs=106.5
Q ss_pred ecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCC
Q 018322 162 VAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPIT 241 (358)
Q Consensus 162 ~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~ 241 (358)
..+........|+|++..++++...++.|+.|+... . ...+..+...+.+++|++++
T Consensus 41 ~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g----------------------~-~~~~~~~~~~~~gl~~d~dG 97 (305)
T 3dr2_A 41 YDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDG----------------------T-VDVLLDATAFTNGNAVDAQQ 97 (305)
T ss_dssp ECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTS----------------------C-EEEEEESCSCEEEEEECTTS
T ss_pred ecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCC----------------------C-EEEEeCCCCccceeeECCCC
Confidence 345566788999999866888888899999998743 1 23344455678899999998
Q ss_pred CCeEEEEeCCCcEEEEecCCCCCcccCCCcccc-CCCcEEEEEECCCCCCEEEE----EEC-------------CCcEEE
Q 018322 242 TGRLVTGDCNSCIYLWEPASDATWNVDPNPFIG-HSASVEDLQWSPTEPDVFAS----CSV-------------DGHIAI 303 (358)
Q Consensus 242 ~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~-h~~~V~~v~~sp~~~~~las----~s~-------------Dg~I~i 303 (358)
. ++++...++.|.+|+.. +..........+ ....+++++++|++. ++++ |.. .+.|..
T Consensus 98 ~-l~v~~~~~~~v~~~~~~--g~~~~~~~~~~~~~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~v~~ 173 (305)
T 3dr2_A 98 R-LVHCEHGRRAITRSDAD--GQAHLLVGRYAGKRLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHSVYR 173 (305)
T ss_dssp C-EEEEETTTTEEEEECTT--SCEEEEECEETTEECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEEEEE
T ss_pred C-EEEEECCCCEEEEECCC--CCEEEEEeccCCCccCCCCCEEECCCCC-EEEeCcCCCccccccccccccccCCCeEEE
Confidence 6 66555556789999974 332211111111 124577899999998 7776 332 256777
Q ss_pred EECCCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCC------CCEEEEeCCC
Q 018322 304 WDTRVGKSALTSFKAHNADVNVISWNRLASCLLASGSDD------GTFSIHDLRL 352 (358)
Q Consensus 304 wD~r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~D------g~i~iwDlr~ 352 (358)
||..++. +..+. .....+.++|+|++ ..|+.+... +.|.+||+..
T Consensus 174 ~d~~~g~--~~~~~-~~~~p~gl~~spdg-~~lyv~~~~~~~~~~~~i~~~~~~~ 224 (305)
T 3dr2_A 174 LPPDGSP--LQRMA-DLDHPNGLAFSPDE-QTLYVSQTPEQGHGSVEITAFAWRD 224 (305)
T ss_dssp ECSSSCC--CEEEE-EESSEEEEEECTTS-SEEEEEECCC---CCCEEEEEEEET
T ss_pred EcCCCCc--EEEEe-cCCCCcceEEcCCC-CEEEEEecCCcCCCCCEEEEEEecC
Confidence 8876543 22222 44567899999999 655555443 6899998753
No 209
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.51 E-value=1.7e-05 Score=70.10 Aligned_cols=157 Identities=8% Similarity=-0.061 Sum_probs=108.7
Q ss_pred CCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCC
Q 018322 164 HQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTG 243 (358)
Q Consensus 164 H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~ 243 (358)
+...+..+.+.+++ .+.++...++.|..||..... ....+......+.++++.+++.
T Consensus 60 ~~~~~~~i~~~~~g-~l~v~~~~~~~v~~~d~~g~~---------------------~~~~~~~~~~~~~~i~~~~~g~- 116 (300)
T 2qc5_A 60 PDAKVMCLIVSSLG-DIWFTENGANKIGKLSKKGGF---------------------TEYPLPQPDSGPYGITEGLNGD- 116 (300)
T ss_dssp TTCCEEEEEECTTS-CEEEEETTTTEEEEECTTSCE---------------------EEEECSSTTCCEEEEEECSTTC-
T ss_pred CCCcceeEEECCCC-CEEEEecCCCeEEEECCCCCe---------------------EEecCCCCCCCCccceECCCCC-
Confidence 44678999999988 677776667889999876311 1111222335688999999886
Q ss_pred eEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEecCCCCe
Q 018322 244 RLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADV 323 (358)
Q Consensus 244 ~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V 323 (358)
++++...++.|..|+.. +.... ..+......+.++++.+++. ++++....+.|..||. .+.........+...+
T Consensus 117 l~v~~~~~~~i~~~~~~--g~~~~--~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~ 190 (300)
T 2qc5_A 117 IWFTQLNGDRIGKLTAD--GTIYE--YDLPNKGSYPAFITLGSDNA-LWFTENQNNSIGRITN-TGKLEEYPLPTNAAAP 190 (300)
T ss_dssp EEEEETTTTEEEEECTT--SCEEE--EECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECT-TCCEEEEECSSTTCCE
T ss_pred EEEEccCCCeEEEECCC--CCEEE--ccCCCCCCCceeEEECCCCC-EEEEecCCCeEEEECC-CCcEEEeeCCCCCCCc
Confidence 77766667899999875 22210 11222345789999999998 8877777889999998 4322211222344568
Q ss_pred EEEEEeCCCCcEEEEEeCCCCEEEEeC
Q 018322 324 NVISWNRLASCLLASGSDDGTFSIHDL 350 (358)
Q Consensus 324 ~~i~~~p~~~~~lasgs~Dg~i~iwDl 350 (358)
..|++.+++ .++++....+.|.+||.
T Consensus 191 ~~i~~d~~g-~l~v~~~~~~~i~~~~~ 216 (300)
T 2qc5_A 191 VGITSGNDG-ALWFVEIMGNKIGRITT 216 (300)
T ss_dssp EEEEECTTS-SEEEEETTTTEEEEECT
T ss_pred ceEEECCCC-CEEEEccCCCEEEEEcC
Confidence 999999988 77777766778999987
No 210
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.51 E-value=6.6e-06 Score=73.49 Aligned_cols=158 Identities=11% Similarity=0.072 Sum_probs=101.9
Q ss_pred cCCCceeEEEEcCCCCcEEEE-------EeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEE-----cCCCC
Q 018322 163 AHQGCVNRIRAMTQNPHICAS-------WADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF-----GGHKD 230 (358)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~lat-------~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~h~~ 230 (358)
..-....++.|.+++ .++++ ...++.|.+||.... +. ..+ .++..
T Consensus 15 ~~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~~i~~~d~~~g---------------------~~-~~~~~~~~~~~~~ 71 (314)
T 1pjx_A 15 EDIPGAEGPVFDKNG-DFYIVAPEVEVNGKPAGEILRIDLKTG---------------------KK-TVICKPEVNGYGG 71 (314)
T ss_dssp CCCTTCEEEEECTTS-CEEEEETTCEETTEECCEEEEECTTTC---------------------CE-EEEECCEETTEEC
T ss_pred ccCCCccCceECCCC-CEEEEEeccccCCCCCCEEEEEeCCCC---------------------cE-EEEEecccCCCCC
Confidence 344567899999888 67777 567789999997651 11 111 12445
Q ss_pred CeEEEEeCCC-CCCeEEEEeCCCcEEEEecCCCCCcccC-CCcccc-CCCcEEEEEECCCCCCEEEEEECC---------
Q 018322 231 EGYAIDWNPI-TTGRLVTGDCNSCIYLWEPASDATWNVD-PNPFIG-HSASVEDLQWSPTEPDVFASCSVD--------- 298 (358)
Q Consensus 231 ~v~~l~~s~~-~~~~l~sgs~dg~I~lwd~~~~~~~~~~-~~~~~~-h~~~V~~v~~sp~~~~~las~s~D--------- 298 (358)
.+.+++++++ + .|..++....|.+||.. +..... .....+ ....+.++++++++. ++++...+
T Consensus 72 ~~~~i~~~~~~g--~l~v~~~~~~l~~~d~~--g~~~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~~ 146 (314)
T 1pjx_A 72 IPAGCQCDRDAN--QLFVADMRLGLLVVQTD--GTFEEIAKKDSEGRRMQGCNDCAFDYEGN-LWITAPAGEVAPADYTR 146 (314)
T ss_dssp CEEEEEECSSSS--EEEEEETTTEEEEEETT--SCEEECCSBCTTSCBCBCCCEEEECTTSC-EEEEECBCBCTTSCCCB
T ss_pred CCceEEEecCCC--cEEEEECCCCEEEEeCC--CCEEEEEeccCCCccccCCcCEEECCCCC-EEEEecCcccccccccc
Confidence 7889999998 5 44445445579999986 332211 111111 224588999999997 77766554
Q ss_pred ------CcEEEEECCCCCCeeEEEecCCCCeEEEEEe----CCCCcEEEEEeCCCCEEEEeCC
Q 018322 299 ------GHIAIWDTRVGKSALTSFKAHNADVNVISWN----RLASCLLASGSDDGTFSIHDLR 351 (358)
Q Consensus 299 ------g~I~iwD~r~~~~~~~~~~~h~~~V~~i~~~----p~~~~~lasgs~Dg~i~iwDlr 351 (358)
+.|..||.. + . +..+..+....+.++|+ |++..++++...++.|.+||+.
T Consensus 147 ~~~~~~~~l~~~~~~-g-~-~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~ 206 (314)
T 1pjx_A 147 SMQEKFGSIYCFTTD-G-Q-MIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIK 206 (314)
T ss_dssp TTSSSCEEEEEECTT-S-C-EEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEE
T ss_pred cccCCCCeEEEECCC-C-C-EEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECC
Confidence 567777764 2 2 22333344457899999 9983345555677899999975
No 211
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.47 E-value=8.5e-06 Score=72.87 Aligned_cols=152 Identities=10% Similarity=0.099 Sum_probs=98.1
Q ss_pred CceeEEEEcCCCCcEEEEE-eC--------CCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEE
Q 018322 166 GCVNRIRAMTQNPHICASW-AD--------TGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAID 236 (358)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~-s~--------dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 236 (358)
..++.+.+.|++ .++++. .. .....||.+... .. +..+..+......++
T Consensus 98 ~~~~di~~d~dG-~l~~~~~~~~~~~~~~~~~~~~l~~~d~~--------------------g~-~~~~~~~~~~pngi~ 155 (297)
T 3g4e_A 98 NRFNDGKVDPAG-RYFAGTMAEETAPAVLERHQGALYSLFPD--------------------HH-VKKYFDQVDISNGLD 155 (297)
T ss_dssp EEEEEEEECTTS-CEEEEEEECCSBTTBCCTTCEEEEEECTT--------------------SC-EEEEEEEESBEEEEE
T ss_pred CCCCCEEECCCC-CEEEecCCcccccccccCCCcEEEEEECC--------------------CC-EEEEeeccccccceE
Confidence 457889999999 455543 22 123455555431 11 112222334567899
Q ss_pred eCCCCCCeEEEEeCCCcEEEEecC-CCCCcc--cCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCee
Q 018322 237 WNPITTGRLVTGDCNSCIYLWEPA-SDATWN--VDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSAL 313 (358)
Q Consensus 237 ~s~~~~~~l~sgs~dg~I~lwd~~-~~~~~~--~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~ 313 (358)
|+|++..++++.+.++.|.+|++. ..+... .....+..+......+++++++. ++++....+.|..||..++ ..+
T Consensus 156 ~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~-lwva~~~~~~v~~~d~~tG-~~~ 233 (297)
T 3g4e_A 156 WSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGK-LWVACYNGGRVIRLDPVTG-KRL 233 (297)
T ss_dssp ECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSC-EEEEEETTTEEEEECTTTC-CEE
T ss_pred EcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCC-EEEEEcCCCEEEEEcCCCc-eEE
Confidence 999997344566667899999974 222211 00111222345678899999997 8888888899999999874 466
Q ss_pred EEEecCCCCeEEEEEe-CCCCcEEEEEeC
Q 018322 314 TSFKAHNADVNVISWN-RLASCLLASGSD 341 (358)
Q Consensus 314 ~~~~~h~~~V~~i~~~-p~~~~~lasgs~ 341 (358)
..+..+...+++++|. |++..+++|...
T Consensus 234 ~~i~~p~~~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 234 QTVKLPVDKTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp EEEECSSSBEEEEEEESGGGCEEEEEEBC
T ss_pred EEEECCCCCceEEEEeCCCCCEEEEEcCC
Confidence 6676676789999998 887556666543
No 212
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.43 E-value=0.00012 Score=67.87 Aligned_cols=164 Identities=11% Similarity=-0.003 Sum_probs=97.3
Q ss_pred EEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCeEEEEeC
Q 018322 171 IRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDC 250 (358)
Q Consensus 171 i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~l~sgs~ 250 (358)
+.+.|.++..+++.+.||.+.+++. ...... .. ...+. +.+...-.....+.+++.+++++ +.
T Consensus 170 ~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~-~~------------~~~~~--~~~~~p~~~~~~~~~~~~~~~~~-~~ 232 (373)
T 2mad_H 170 YHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAG-AG------------LVGAM--LTAAQNLLTQPAQANKSGRIVWP-VY 232 (373)
T ss_pred EEEEeCCCceEEEEcCCCCEEEEEC-CCcEEE-EE------------ecccc--ccCCcceeecceeEecCCEEEEE-cC
Confidence 4566777677788889999999999 421100 00 00010 11111111234455665533444 36
Q ss_pred CCcEEEEecCCCCCcccCCCcccc----------CCCcEEEEEECCCCCCEEEEEEC---------CCcEEEEECCCCCC
Q 018322 251 NSCIYLWEPASDATWNVDPNPFIG----------HSASVEDLQWSPTEPDVFASCSV---------DGHIAIWDTRVGKS 311 (358)
Q Consensus 251 dg~I~lwd~~~~~~~~~~~~~~~~----------h~~~V~~v~~sp~~~~~las~s~---------Dg~I~iwD~r~~~~ 311 (358)
.+.+.+.|+........ ..+.- .......+.++|++..++++... .+.|.++|+.+. +
T Consensus 233 ~~~v~vid~~~~~~~v~--~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~-~ 309 (373)
T 2mad_H 233 SGKILQADISAAGATNK--APIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG-Q 309 (373)
T ss_pred CceEEEEeccCCcceEe--eeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCC-E
Confidence 78899999865321111 11110 12234457889998855555442 357999999884 4
Q ss_pred eeEEEecCCCCeEEEEEeCCCCcEEEEEe-CCCCEEEEeCCCCCC
Q 018322 312 ALTSFKAHNADVNVISWNRLASCLLASGS-DDGTFSIHDLRLLKV 355 (358)
Q Consensus 312 ~~~~~~~h~~~V~~i~~~p~~~~~lasgs-~Dg~i~iwDlr~~~~ 355 (358)
.+.++. -......+.|+|++..+++++. .++.|.+||+++++.
T Consensus 310 vv~~i~-~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~v 353 (373)
T 2mad_H 310 TSSQIS-LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQ 353 (373)
T ss_pred EEEEEE-CCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCE
Confidence 556664 3335789999999943777776 589999999998763
No 213
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.43 E-value=7.5e-06 Score=77.00 Aligned_cols=160 Identities=11% Similarity=0.060 Sum_probs=104.3
Q ss_pred CceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCeE
Q 018322 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRL 245 (358)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~l 245 (358)
.....|+|.+++ .++++...++.|++||... ......... ..... ++|++++. .|
T Consensus 131 ~~P~~la~d~~g-~lyv~d~~~~~I~~id~~~---------------------g~~~~~~~~-~~~~~-ia~~~~g~-~l 185 (409)
T 3hrp_A 131 KYMWGIAAVGNN-TVLAYQRDDPRVRLISVDD---------------------NKVTTVHPG-FKGGK-PAVTKDKQ-RV 185 (409)
T ss_dssp CCEEEEEECSTT-EEEEEETTTTEEEEEETTT---------------------TEEEEEEET-CCBCB-CEECTTSS-EE
T ss_pred CCceEEEEeCCC-CEEEEecCCCcEEEEECCC---------------------CEEEEeecc-CCCCc-eeEecCCC-cE
Confidence 467789999988 6888878889999999875 122222222 33344 99999997 88
Q ss_pred EEEeCCC--cEEEEecCCCCCcccCCCcc-ccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEE---EecC
Q 018322 246 VTGDCNS--CIYLWEPASDATWNVDPNPF-IGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTS---FKAH 319 (358)
Q Consensus 246 ~sgs~dg--~I~lwd~~~~~~~~~~~~~~-~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~---~~~h 319 (358)
++++.++ .|.+|+......... ...+ ......+.+++++|.+..+++ +..++.|+.||...+...+.. ...+
T Consensus 186 ~~~d~~~~~~I~~~d~~~~~~~~~-~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~~~~~~~~~~~g~ 263 (409)
T 3hrp_A 186 YSIGWEGTHTVYVYMKASGWAPTR-IGQLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQEVTLIKQLELSGS 263 (409)
T ss_dssp EEEBSSTTCEEEEEEGGGTTCEEE-EEECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCCEEEEEECCCCSC
T ss_pred EEEecCCCceEEEEEcCCCceeEE-eeeccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCCEEEEecccccCC
Confidence 8887766 788888765322110 0011 113456788999995542444 677889999999874321110 1112
Q ss_pred CCC--eEEEEEeCCCCcEEEEEeCCCCEEEEeCCC
Q 018322 320 NAD--VNVISWNRLASCLLASGSDDGTFSIHDLRL 352 (358)
Q Consensus 320 ~~~--V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~ 352 (358)
... .+.|+|+|++..++++-..++.|+.|+...
T Consensus 264 ~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g 298 (409)
T 3hrp_A 264 LGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDG 298 (409)
T ss_dssp CCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTC
T ss_pred CCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCC
Confidence 221 138999996437888877888999998753
No 214
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.32 E-value=6.3e-05 Score=68.16 Aligned_cols=155 Identities=7% Similarity=0.015 Sum_probs=98.0
Q ss_pred cCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcC----C-CCCeEEEEe
Q 018322 163 AHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGG----H-KDEGYAIDW 237 (358)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----h-~~~v~~l~~ 237 (358)
.+...+.++.+.|++ .++++ +.+ .|.+||.... .. ..+.. . ...+.++.+
T Consensus 87 ~~~~~v~~i~~~~dg-~l~v~-~~~-gl~~~d~~~g---------------------~~-~~~~~~~~~~~~~~~~~i~~ 141 (326)
T 2ghs_A 87 ALPFMGSALAKISDS-KQLIA-SDD-GLFLRDTATG---------------------VL-TLHAELESDLPGNRSNDGRM 141 (326)
T ss_dssp ECSSCEEEEEEEETT-EEEEE-ETT-EEEEEETTTC---------------------CE-EEEECSSTTCTTEEEEEEEE
T ss_pred ECCCcceEEEEeCCC-eEEEE-ECC-CEEEEECCCC---------------------cE-EEEeeCCCCCCCCCCCCEEE
Confidence 345789999999998 55554 344 4899998652 11 11111 1 235789999
Q ss_pred CCCCCCeEEEEeC------CCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECC--CC
Q 018322 238 NPITTGRLVTGDC------NSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTR--VG 309 (358)
Q Consensus 238 s~~~~~~l~sgs~------dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r--~~ 309 (358)
+|++. ++++... .+.|..++ + +... .+..+....+.++|+|++..++++.+.++.|.+||+. ++
T Consensus 142 d~~G~-l~v~~~~~~~~~~~~~l~~~~--~-g~~~----~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~G 213 (326)
T 2ghs_A 142 HPSGA-LWIGTMGRKAETGAGSIYHVA--K-GKVT----KLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTG 213 (326)
T ss_dssp CTTSC-EEEEEEETTCCTTCEEEEEEE--T-TEEE----EEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTC
T ss_pred CCCCC-EEEEeCCCcCCCCceEEEEEe--C-CcEE----EeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccC
Confidence 99987 6554432 24455555 2 3321 2222334578899999998455666667899999986 43
Q ss_pred -CC----eeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCC
Q 018322 310 -KS----ALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLR 351 (358)
Q Consensus 310 -~~----~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr 351 (358)
.. ....+......+..+++.+++ .++++...++.|.+||..
T Consensus 214 l~~~~~~~~~~~~~~~~~p~gi~~d~~G-~lwva~~~~~~v~~~d~~ 259 (326)
T 2ghs_A 214 LPTGKAEVFIDSTGIKGGMDGSVCDAEG-HIWNARWGEGAVDRYDTD 259 (326)
T ss_dssp CBSSCCEEEEECTTSSSEEEEEEECTTS-CEEEEEETTTEEEEECTT
T ss_pred CcccCceEEEECCCCCCCCCeeEECCCC-CEEEEEeCCCEEEEECCC
Confidence 11 112222234557889999999 777776667889999873
No 215
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.25 E-value=1.4e-07 Score=87.73 Aligned_cols=140 Identities=10% Similarity=0.060 Sum_probs=72.4
Q ss_pred cEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCeEEEEeCCCcEEEEe
Q 018322 179 HICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWE 258 (358)
Q Consensus 179 ~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd 258 (358)
.++++++.||.|+.||..+ ++.+..+.. ..+.+..+...+. .+++++.||.|+.||
T Consensus 10 ~~v~~gs~dg~v~a~d~~t---------------------G~~~W~~~~--~~~~s~p~~~~g~-~~v~~s~dg~l~a~d 65 (369)
T 2hz6_A 10 TLLFVSTLDGSLHAVSKRT---------------------GSIKWTLKE--DPVLQVPTHVEEP-AFLPDPNDGSLYTLG 65 (369)
T ss_dssp TEEEEEETTSEEEEEETTT---------------------CCEEEEEEC--CCSCCCC-----C-CEEECTTTCCEEEC-
T ss_pred CEEEEEcCCCEEEEEECCC---------------------CCEEEEecC--CCceecceEcCCC-EEEEeCCCCEEEEEE
Confidence 5788899999999999877 455555544 3444444455555 778888999999999
Q ss_pred cCCCCC-cccCCCcccc--CCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEecCCCCeEEEEEeCCCCcE
Q 018322 259 PASDAT-WNVDPNPFIG--HSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRLASCL 335 (358)
Q Consensus 259 ~~~~~~-~~~~~~~~~~--h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~~p~~~~~ 335 (358)
..++.. |... ..... ...++ +. .+. .+++|+.++.|+.||.++++ .+..+..+. .+.++|.+ ..
T Consensus 66 ~~tG~~~w~~~-~~~~~~~~~sp~----~~-~~~-~v~~g~~dg~v~a~D~~tG~-~~w~~~~~~----~~~~~p~~-~~ 132 (369)
T 2hz6_A 66 SKNNEGLTKLP-FTIPELVQASPC----RS-SDG-ILYMGKKQDIWYVIDLLTGE-KQQTLSSAF----ADSLSPST-SL 132 (369)
T ss_dssp ----CCSEECS-CCHHHHHTTCSC----C-------CCCCEEEEEEEEECCC----------------------------
T ss_pred CCCCceeeeee-ccCccccccCce----Ee-cCC-EEEEEeCCCEEEEEECCCCc-EEEEecCCC----cccccccC-CE
Confidence 976432 2210 00000 11111 11 233 67788889999999999864 455554443 23456666 78
Q ss_pred EEEEeCCCCEEEEeCCCCCC
Q 018322 336 LASGSDDGTFSIHDLRLLKV 355 (358)
Q Consensus 336 lasgs~Dg~i~iwDlr~~~~ 355 (358)
|++++.|+.|+.||.++++.
T Consensus 133 v~~~~~dg~v~a~d~~tG~~ 152 (369)
T 2hz6_A 133 LYLGRTEYTITMYDTKTREL 152 (369)
T ss_dssp EEEEEEEEEEECCCSSSSSC
T ss_pred EEEEecCCEEEEEECCCCCE
Confidence 88889999999999988764
No 216
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.23 E-value=2.8e-07 Score=85.58 Aligned_cols=154 Identities=12% Similarity=0.030 Sum_probs=74.1
Q ss_pred CceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCC-eE-EEEeCCCCCC
Q 018322 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDE-GY-AIDWNPITTG 243 (358)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-v~-~l~~s~~~~~ 243 (358)
+.+.+..+..++ .++++++.||.|+.||... .+.+..+..+... +. +.... .+ +
T Consensus 38 ~~~~s~p~~~~g-~~~v~~s~dg~l~a~d~~t---------------------G~~~w~~~~~~~~~~~~sp~~~-~~-~ 93 (369)
T 2hz6_A 38 DPVLQVPTHVEE-PAFLPDPNDGSLYTLGSKN---------------------NEGLTKLPFTIPELVQASPCRS-SD-G 93 (369)
T ss_dssp CCSCCCC------CCEEECTTTCCEEEC--------------------------CCSEECSCCHHHHHTTCSCC------
T ss_pred CCceecceEcCC-CEEEEeCCCCEEEEEECCC---------------------CceeeeeeccCccccccCceEe-cC-C
Confidence 455555555555 5777778999999999865 2222222222110 00 00001 22 3
Q ss_pred eEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEecCCCCe
Q 018322 244 RLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADV 323 (358)
Q Consensus 244 ~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V 323 (358)
.+++|+.++.|+.||..++.. . ..+..+. .+.++|.+. .+++++.++.|+.||.+++. .+..+..+. .
T Consensus 94 ~v~~g~~dg~v~a~D~~tG~~-~---w~~~~~~----~~~~~p~~~-~v~~~~~dg~v~a~d~~tG~-~~W~~~~~~--~ 161 (369)
T 2hz6_A 94 ILYMGKKQDIWYVIDLLTGEK-Q---QTLSSAF----ADSLSPSTS-LLYLGRTEYTITMYDTKTRE-LRWNATYFD--Y 161 (369)
T ss_dssp -CCCCEEEEEEEEECCC-------------------------------EEEEEEEEEEECCCSSSSS-CCCEEEEEE--E
T ss_pred EEEEEeCCCEEEEEECCCCcE-E---EEecCCC----cccccccCC-EEEEEecCCEEEEEECCCCC-EEEeEeccc--c
Confidence 778888899999999987433 1 2233222 234567666 78888999999999999864 444432211 1
Q ss_pred EEEEEeCCC--CcEEEEEeCCCCEEEEeCCCCCC
Q 018322 324 NVISWNRLA--SCLLASGSDDGTFSIHDLRLLKV 355 (358)
Q Consensus 324 ~~i~~~p~~--~~~lasgs~Dg~i~iwDlr~~~~ 355 (358)
....+..+. ...+++++.+|.|..||.++++.
T Consensus 162 ~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~ 195 (369)
T 2hz6_A 162 AASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDV 195 (369)
T ss_dssp CCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCE
T ss_pred cCccccCCccccceEEEECCCCEEEEEECCCCcE
Confidence 122233321 02466678899999999988753
No 217
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.08 E-value=0.00094 Score=58.26 Aligned_cols=160 Identities=7% Similarity=-0.065 Sum_probs=103.7
Q ss_pred CceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCeE
Q 018322 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRL 245 (358)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~l 245 (358)
..+..+.+.+.+..++++-...+.|..+++... .....+........+|++++.+..++
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~---------------------~~~~~~~~~~~~p~~ia~d~~~~~ly 94 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGG---------------------EPTTIIRQDLGSPEGIALDHLGRTIF 94 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSC---------------------CCEEEECTTCCCEEEEEEETTTTEEE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCC---------------------CcEEEEECCCCCccEEEEEecCCeEE
Confidence 357889999976577777777889999998651 22222222224678999998765244
Q ss_pred EEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEEC--CCcEEEEECCCCCCeeEEE-ecCCCC
Q 018322 246 VTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSV--DGHIAIWDTRVGKSALTSF-KAHNAD 322 (358)
Q Consensus 246 ~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~--Dg~I~iwD~r~~~~~~~~~-~~h~~~ 322 (358)
++-...+.|.++++....... ...........++++|.+..++++... .+.|..+++.... ...+ ......
T Consensus 95 v~d~~~~~I~~~~~~g~~~~~----~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~--~~~~~~~~~~~ 168 (267)
T 1npe_A 95 WTDSQLDRIEVAKMDGTQRRV----LFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN--RRILAQDNLGL 168 (267)
T ss_dssp EEETTTTEEEEEETTSCSCEE----EECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC--CEEEECTTCSC
T ss_pred EEECCCCEEEEEEcCCCCEEE----EEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC--cEEEEECCCCC
Confidence 455557799999985422111 111112457899999976646666544 4688888876422 2222 223345
Q ss_pred eEEEEEeCCCCcEEEEEeCCCCEEEEeCCC
Q 018322 323 VNVISWNRLASCLLASGSDDGTFSIHDLRL 352 (358)
Q Consensus 323 V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~ 352 (358)
.+.|+|++++..++++-...+.|.++|+..
T Consensus 169 P~gia~d~~~~~lyv~d~~~~~I~~~~~~g 198 (267)
T 1npe_A 169 PNGLTFDAFSSQLCWVDAGTHRAECLNPAQ 198 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTE
T ss_pred CcEEEEcCCCCEEEEEECCCCEEEEEecCC
Confidence 789999998746667777778999999864
No 218
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.05 E-value=0.00026 Score=66.53 Aligned_cols=157 Identities=20% Similarity=0.163 Sum_probs=99.9
Q ss_pred eeEEEEcCCCCcEEEEEeCC------CcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcC--C-CCCeEEEEeC
Q 018322 168 VNRIRAMTQNPHICASWADT------GHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGG--H-KDEGYAIDWN 238 (358)
Q Consensus 168 V~~i~~~p~~~~~lat~s~d------g~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--h-~~~v~~l~~s 238 (358)
-..+.+.|++ +++++..+ |.|.++|..+ .+.+..+.. . ..-.+.+.|+
T Consensus 140 Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~vlD~~T---------------------~~v~~~~~~~~~~~~~~Yd~~~~ 196 (462)
T 2ece_A 140 LHTVHCGPDA--IYISALGNEEGEGPGGILMLDHYS---------------------FEPLGKWEIDRGDQYLAYDFWWN 196 (462)
T ss_dssp EEEEEECSSC--EEEEEEEETTSCSCCEEEEECTTT---------------------CCEEEECCSBCTTCCCCCCEEEE
T ss_pred ccceeECCCe--EEEEcCCCcCCCCCCeEEEEECCC---------------------CeEEEEEccCCCCccccceEEEC
Confidence 3456788988 55565554 7899999876 344444431 1 1235678999
Q ss_pred CCCCCeEEEEe-------------------CCCcEEEEecCCCCCcccCCCcccc--CCCcEEEEEE--CCCCCCEEEEE
Q 018322 239 PITTGRLVTGD-------------------CNSCIYLWEPASDATWNVDPNPFIG--HSASVEDLQW--SPTEPDVFASC 295 (358)
Q Consensus 239 ~~~~~~l~sgs-------------------~dg~I~lwd~~~~~~~~~~~~~~~~--h~~~V~~v~~--sp~~~~~las~ 295 (358)
|.++ .+++.. ...+|.+||+.+. +.. ..+.- .......|.| +|+++..++++
T Consensus 197 p~~~-~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~-k~~---~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~ 271 (462)
T 2ece_A 197 LPNE-VLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR-KRI---HSLTLGEENRMALELRPLHDPTKLMGFINM 271 (462)
T ss_dssp TTTT-EEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT-EEE---EEEESCTTEEEEEEEEECSSTTCCEEEEEE
T ss_pred CCCC-EEEEccCcCccccccccchhhhhhccCCEEEEEECCCC-cEe---eEEecCCCCCccceeEeeECCCCCEEEEEE
Confidence 9998 888874 3689999999763 322 22221 1123445555 99999777777
Q ss_pred E-----CCCcEEEEECCCCCC-eeEE--EecC----------------CCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCC
Q 018322 296 S-----VDGHIAIWDTRVGKS-ALTS--FKAH----------------NADVNVISWNRLASCLLASGSDDGTFSIHDLR 351 (358)
Q Consensus 296 s-----~Dg~I~iwD~r~~~~-~~~~--~~~h----------------~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr 351 (358)
- .+++|.+|....+.. .... +... ......|.+++++..++++.-..+.|.+||+.
T Consensus 272 e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 272 VVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp EEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECS
T ss_pred eeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 7 788998776543211 1111 1110 24467899999995555666567899999986
Q ss_pred C
Q 018322 352 L 352 (358)
Q Consensus 352 ~ 352 (358)
.
T Consensus 352 d 352 (462)
T 2ece_A 352 N 352 (462)
T ss_dssp S
T ss_pred C
Confidence 3
No 219
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.04 E-value=7.6e-05 Score=68.13 Aligned_cols=173 Identities=10% Similarity=0.018 Sum_probs=96.7
Q ss_pred CceeEEEEcCCCCcEEEEEe---CCCcEEEEeCCCCcc-ccccc-cccccCCCCCCCCCCCcEEEcC------CCCCeEE
Q 018322 166 GCVNRIRAMTQNPHICASWA---DTGHVQVWDLRSHLN-ALAES-ETIVGQGAPQVSNQSPLVKFGG------HKDEGYA 234 (358)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s---~dg~V~iwd~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~------h~~~v~~ 234 (358)
..++.+++.+.+..++++-. .++.|.+||+..... ..... ................+..... -...+..
T Consensus 120 ~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~g 199 (343)
T 2qe8_A 120 SFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNG 199 (343)
T ss_dssp CCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEE
T ss_pred cccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccce
Confidence 45789999986546667766 678999999875211 10000 0000000000000000000000 1124688
Q ss_pred EEeCCCCCCeEEEEeCCC-cEEEEecCC--CCCc----ccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECC
Q 018322 235 IDWNPITTGRLVTGDCNS-CIYLWEPAS--DATW----NVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTR 307 (358)
Q Consensus 235 l~~s~~~~~~l~sgs~dg-~I~lwd~~~--~~~~----~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r 307 (358)
|+|+|++. .|+.++..+ .|..++... .+.. ........++......+++++++. ++++...++.|.+||..
T Consensus 200 ia~s~dg~-~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~-l~va~~~~~~V~~~d~~ 277 (343)
T 2qe8_A 200 IVLDAENE-WLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHN-IYVGDLAHSAIGVITSA 277 (343)
T ss_dssp EEECTTSC-EEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCC-EEEEEGGGTEEEEEETT
T ss_pred eEeccCCC-EEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCC-EEEEccCCCeEEEEECC
Confidence 99999997 788777666 444444311 0100 000001223445567799999987 99999999999999984
Q ss_pred CCCCeeEEEe--cCCCCeEEEEEeCCCCcEEEEEeCCC
Q 018322 308 VGKSALTSFK--AHNADVNVISWNRLASCLLASGSDDG 343 (358)
Q Consensus 308 ~~~~~~~~~~--~h~~~V~~i~~~p~~~~~lasgs~Dg 343 (358)
.+. +..+. .+...+..++|.+++ .++++.+..+
T Consensus 278 ~G~--~~~~~~~~~~~~p~~va~~~~g-~l~v~~~~~~ 312 (343)
T 2qe8_A 278 DRA--YKLLVTDEKLSWTDSFNFGSDG-YLYFDCNQLH 312 (343)
T ss_dssp TTE--EEEEEECGGGSCEEEEEECTTS-CEEEEECCGG
T ss_pred CCC--EEEEEECCceecCCeeEECCCC-cEEEEeCccc
Confidence 432 22222 234568999999988 7877776443
No 220
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.01 E-value=0.00039 Score=64.20 Aligned_cols=71 Identities=10% Similarity=-0.004 Sum_probs=52.1
Q ss_pred EEECCCCCCEEEEEE-C-------CCcEEEEECCCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEe-CCCCEEEEeCCC
Q 018322 282 LQWSPTEPDVFASCS-V-------DGHIAIWDTRVGKSALTSFKAHNADVNVISWNRLASCLLASGS-DDGTFSIHDLRL 352 (358)
Q Consensus 282 v~~sp~~~~~las~s-~-------Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs-~Dg~i~iwDlr~ 352 (358)
+.++|++..++++.. . ++.+.++|+.+. +.+..+.... ....|.|+|++..++++.. .++.|.++|+.+
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~-~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t 346 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVG-QTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAAS 346 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSC-CEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSS
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCC-eEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCC
Confidence 678888885665544 2 235669999985 4555553332 5789999999956788887 699999999998
Q ss_pred CC
Q 018322 353 LK 354 (358)
Q Consensus 353 ~~ 354 (358)
++
T Consensus 347 ~k 348 (368)
T 1mda_H 347 DQ 348 (368)
T ss_dssp CE
T ss_pred Cc
Confidence 75
No 221
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.00 E-value=0.00031 Score=65.05 Aligned_cols=131 Identities=10% Similarity=-0.055 Sum_probs=84.0
Q ss_pred cEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCeEEEEe----------CCCcEEEEe
Q 018322 189 HVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGD----------CNSCIYLWE 258 (358)
Q Consensus 189 ~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~l~sgs----------~dg~I~lwd 258 (358)
+|.+||... .+.+..+.....+ .++++|++. +|+++. .++.|.+||
T Consensus 48 ~v~v~D~~t---------------------~~~~~~i~~g~~p--~i~~spDg~-~lyv~n~~~~~~~rg~~~~~v~viD 103 (373)
T 2mad_H 48 QQWVLDAGS---------------------GSILGHVNGGFLP--NPVAAHSGS-EFALASTSFSRIAKGKRTDYVEVFD 103 (373)
T ss_pred EEEEEECCC---------------------CeEEEEecCCCCC--CeEECCCCC-EEEEEeccccccccCCCCCeEEEEE
Confidence 789999876 3344444433333 899999998 777765 367899999
Q ss_pred cCCCCCcccCCCccc--c---CCCcEEEEEECCCCCCEEEEEE-C-CCcEEEEECCCCCCeeEE-EecCCCCeEEEEEeC
Q 018322 259 PASDATWNVDPNPFI--G---HSASVEDLQWSPTEPDVFASCS-V-DGHIAIWDTRVGKSALTS-FKAHNADVNVISWNR 330 (358)
Q Consensus 259 ~~~~~~~~~~~~~~~--~---h~~~V~~v~~sp~~~~~las~s-~-Dg~I~iwD~r~~~~~~~~-~~~h~~~V~~i~~~p 330 (358)
..+...... .... . +......+.|+|+++ .++.+. . ++.|.++| .++ +.+.. +.. .. ++.+.|
T Consensus 104 ~~t~~~~~~--i~~~~~~~~~~g~~p~~~~~spDG~-~l~v~n~~~~~~v~viD-~t~-~~~~~~i~~-~~---~~~~~~ 174 (373)
T 2mad_H 104 PVTFLPIAD--IELPDAPRFDVGPYSWMNANTPNNA-DLLFFQFAAGPAVGLVV-QGG-SSDDQLLSS-PT---CYHIHP 174 (373)
T ss_pred CCCCcEEEE--EECCCccccccCCCccceEECCCCC-EEEEEecCCCCeEEEEE-CCC-CEEeEEcCC-Cc---eEEEEe
Confidence 976322110 0010 0 112345789999999 555544 3 58899999 774 45544 322 11 245666
Q ss_pred CCCcEEEEEeCCCCEEEEeCCCC
Q 018322 331 LASCLLASGSDDGTFSIHDLRLL 353 (358)
Q Consensus 331 ~~~~~lasgs~Dg~i~iwDlr~~ 353 (358)
.+...+++.+.||.+.+||+ ++
T Consensus 175 ~~~~~~~~~~~dg~~~~vd~-~g 196 (373)
T 2mad_H 175 GAPSTFYLLCAQGGLAKTDH-AG 196 (373)
T ss_pred CCCceEEEEcCCCCEEEEEC-CC
Confidence 66567777888999999988 54
No 222
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.99 E-value=9.4e-05 Score=68.60 Aligned_cols=147 Identities=6% Similarity=-0.065 Sum_probs=93.4
Q ss_pred EcCCCCcEEEEEeC----CCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCeEEEE
Q 018322 173 AMTQNPHICASWAD----TGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTG 248 (358)
Q Consensus 173 ~~p~~~~~lat~s~----dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~l~sg 248 (358)
..|++..++++-.. ++.|.+.|..+ .+.+..+..-..+ . +.++|++. +|+++
T Consensus 40 ~~pd~~~vyV~~~~~~~~~~~V~ViD~~t---------------------~~v~~~I~vG~~P-~-va~spDG~-~lyVa 95 (386)
T 3sjl_D 40 PAPDARRVYVNDPAHFAAVTQQFVIDGEA---------------------GRVIGMIDGGFLP-N-PVVADDGS-FIAHA 95 (386)
T ss_dssp CCCCTTEEEEEECGGGCSSEEEEEEETTT---------------------TEEEEEEEECSSC-E-EEECTTSS-CEEEE
T ss_pred cCCCCCEEEEEcCcccCCCCEEEEEECCC---------------------CeEEEEEECCCCC-c-EEECCCCC-EEEEE
Confidence 35666555555433 67999999887 4555555443334 4 99999998 66665
Q ss_pred e----------CCCcEEEEecCCCCCcccCCCccc-c------CCCcEEEEEECCCCCCEEEEEEC-CCcEEEEECCCCC
Q 018322 249 D----------CNSCIYLWEPASDATWNVDPNPFI-G------HSASVEDLQWSPTEPDVFASCSV-DGHIAIWDTRVGK 310 (358)
Q Consensus 249 s----------~dg~I~lwd~~~~~~~~~~~~~~~-~------h~~~V~~v~~sp~~~~~las~s~-Dg~I~iwD~r~~~ 310 (358)
+ .++.|.+||..+... . ..+. + .......+.|+|+++.++++... ++.|.++|+.+.
T Consensus 96 n~~~~r~~~G~~~~~VsviD~~t~~v-~---~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~- 170 (386)
T 3sjl_D 96 STVFSRIARGERTDYVEVFDPVTLLP-T---ADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGK- 170 (386)
T ss_dssp EEEEEETTEEEEEEEEEEECTTTCCE-E---EEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTT-
T ss_pred cccccccccCCCCCEEEEEECCCCeE-E---EEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCC-
Confidence 4 367899999987432 1 1111 1 11245568999999955554433 789999999984
Q ss_pred CeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCC
Q 018322 311 SALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRL 352 (358)
Q Consensus 311 ~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~ 352 (358)
+.+.++.... |..+.|.+.+.+++.+.||++.+.++..
T Consensus 171 ~vv~tI~v~g----~~~~~P~g~~~~~~~~~DG~~~~v~~~~ 208 (386)
T 3sjl_D 171 AFKRMLDVPD----CYHIFPTAPDTFFMHCRDGSLAKVAFGT 208 (386)
T ss_dssp EEEEEEECCS----EEEEEEEETTEEEEEETTSCEEEEECCS
T ss_pred cEEEEEECCC----cceeecCCCceeEEECCCCCEEEEECCC
Confidence 4555553221 1223344446666777788888888765
No 223
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.98 E-value=0.0011 Score=62.23 Aligned_cols=152 Identities=10% Similarity=0.029 Sum_probs=94.1
Q ss_pred CCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEc------C-CCCCeEEEEeCCCCCCeEEE
Q 018322 175 TQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG------G-HKDEGYAIDWNPITTGRLVT 247 (358)
Q Consensus 175 p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-h~~~v~~l~~s~~~~~~l~s 247 (358)
+++..+++++..+++|+|+|+....... +...++. . -...-..+..+|++ ++++
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p-----------------~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs 153 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREP-----------------KIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYIS 153 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSC-----------------EEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCc-----------------eeeeeechhhcccccCCCcccceeECCCe--EEEE
Confidence 6677888889999999999997532111 1222221 0 11245567888987 5666
Q ss_pred EeCC------CcEEEEecCCCCCcccCCCccccCC-CcEEEEEECCCCCCEEEEEE-------------------CCCcE
Q 018322 248 GDCN------SCIYLWEPASDATWNVDPNPFIGHS-ASVEDLQWSPTEPDVFASCS-------------------VDGHI 301 (358)
Q Consensus 248 gs~d------g~I~lwd~~~~~~~~~~~~~~~~h~-~~V~~v~~sp~~~~~las~s-------------------~Dg~I 301 (358)
+..+ |.|.+.|..+...... ....... ..-.++.|+|+++ ++++.. ...+|
T Consensus 154 ~~g~~~g~~~g~v~vlD~~T~~v~~~--~~~~~~~~~~~Yd~~~~p~~~-~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V 230 (462)
T 2ece_A 154 ALGNEEGEGPGGILMLDHYSFEPLGK--WEIDRGDQYLAYDFWWNLPNE-VLVSSEWAVPNTIEDGLKLEHLKDRYGNRI 230 (462)
T ss_dssp EEEETTSCSCCEEEEECTTTCCEEEE--CCSBCTTCCCCCCEEEETTTT-EEEECBCCCHHHHTTCCCTTTHHHHSCCEE
T ss_pred cCCCcCCCCCCeEEEEECCCCeEEEE--EccCCCCccccceEEECCCCC-EEEEccCcCccccccccchhhhhhccCCEE
Confidence 5544 7899999876432110 1111122 2244688999998 777664 47899
Q ss_pred EEEECCCCCCeeEEEecC--CCCeEEEEE--eCCCCcEEEEEe-----CCCCEEEEe
Q 018322 302 AIWDTRVGKSALTSFKAH--NADVNVISW--NRLASCLLASGS-----DDGTFSIHD 349 (358)
Q Consensus 302 ~iwD~r~~~~~~~~~~~h--~~~V~~i~~--~p~~~~~lasgs-----~Dg~i~iwD 349 (358)
.+||+.+. +.+.++..- ......|.| +|++...++++- .+++|.+|.
T Consensus 231 ~v~D~~~~-k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~ 286 (462)
T 2ece_A 231 HFWDLRKR-KRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWF 286 (462)
T ss_dssp EEEETTTT-EEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEE
T ss_pred EEEECCCC-cEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEE
Confidence 99999974 455566432 123455656 999944555555 667886654
No 224
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.95 E-value=0.00018 Score=65.63 Aligned_cols=166 Identities=6% Similarity=-0.061 Sum_probs=100.8
Q ss_pred cCCCceeEEEEcCCCCcEEEEEeC-----CCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEc------CCCCC
Q 018322 163 AHQGCVNRIRAMTQNPHICASWAD-----TGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG------GHKDE 231 (358)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~lat~s~-----dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~h~~~ 231 (358)
.|...+.+|++.+++ .++++-.. .+.|.+||+... +.+..+. .+...
T Consensus 64 ~~~~~p~gv~~d~~g-~L~v~D~g~~~~~~~~i~~~d~~tg---------------------~~~~~~~~~~~~~~~~~~ 121 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNG-IVWMLDNGNQSKSVPKLVAWDTLNN---------------------QLSRVIYLPPPITLSNSF 121 (343)
T ss_dssp CCCSCEEEEEECSSS-EEEEEECHHHHTSCCEEEEEETTTT---------------------EEEEEEECCTTTSCTTCC
T ss_pred cceeEeeEEEEcCCC-cEEEEcCCCCcCCCCeEEEEECCCC---------------------eEEEEEECChhhcccccc
Confidence 356789999999998 56665433 578999998752 2122221 12234
Q ss_pred eEEEEeCCCCCCeEEEEe---CCCcEEEEecCCCCCcccCCC---------cc--cc--------------CCCcEEEEE
Q 018322 232 GYAIDWNPITTGRLVTGD---CNSCIYLWEPASDATWNVDPN---------PF--IG--------------HSASVEDLQ 283 (358)
Q Consensus 232 v~~l~~s~~~~~~l~sgs---~dg~I~lwd~~~~~~~~~~~~---------~~--~~--------------h~~~V~~v~ 283 (358)
...|++++.+...+++.. .++.|.+||+.++..+..... .+ .+ ....++.|+
T Consensus 122 ~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia 201 (343)
T 2qe8_A 122 VNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIV 201 (343)
T ss_dssp CCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEE
T ss_pred cceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeE
Confidence 578999876541344544 578999999875432221100 00 00 012468899
Q ss_pred ECCCCCCEEEEEECCC-cEEEEECC---CCC----Ce--eEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCC
Q 018322 284 WSPTEPDVFASCSVDG-HIAIWDTR---VGK----SA--LTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRL 352 (358)
Q Consensus 284 ~sp~~~~~las~s~Dg-~I~iwD~r---~~~----~~--~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~ 352 (358)
|+|++. .|+.+...+ .|..++.. .+. .. .....++......+++.+++ .++++...++.|.+||..+
T Consensus 202 ~s~dg~-~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G-~l~va~~~~~~V~~~d~~~ 278 (343)
T 2qe8_A 202 LDAENE-WLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDH-NIYVGDLAHSAIGVITSAD 278 (343)
T ss_dssp ECTTSC-EEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTC-CEEEEEGGGTEEEEEETTT
T ss_pred eccCCC-EEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCC-CEEEEccCCCeEEEEECCC
Confidence 999998 566665554 55555532 110 00 01122344456778999998 8999988899999999833
No 225
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=97.95 E-value=0.00012 Score=65.46 Aligned_cols=109 Identities=10% Similarity=0.071 Sum_probs=69.0
Q ss_pred CCeEEEEeCCCCCCeEEEEeCC------CcEEEEecCCCCCcccCCCcc-ccCCCcEEEEEECCCCCCEEEEEECCCcEE
Q 018322 230 DEGYAIDWNPITTGRLVTGDCN------SCIYLWEPASDATWNVDPNPF-IGHSASVEDLQWSPTEPDVFASCSVDGHIA 302 (358)
Q Consensus 230 ~~v~~l~~s~~~~~~l~sgs~d------g~I~lwd~~~~~~~~~~~~~~-~~h~~~V~~v~~sp~~~~~las~s~Dg~I~ 302 (358)
.....++|+|++. .|+.+... +.|.+|++...+ .. ....+ .........+++++++. ++++. .+ .|.
T Consensus 188 ~~p~gl~~spdg~-~lyv~~~~~~~~~~~~i~~~~~~~~~-l~-~~~~~~~~~~~~pdgi~~d~~G~-lwv~~-~~-gv~ 261 (305)
T 3dr2_A 188 DHPNGLAFSPDEQ-TLYVSQTPEQGHGSVEITAFAWRDGA-LH-DRRHFASVPDGLPDGFCVDRGGW-LWSSS-GT-GVC 261 (305)
T ss_dssp SSEEEEEECTTSS-EEEEEECCC---CCCEEEEEEEETTE-EE-EEEEEECCSSSCCCSEEECTTSC-EEECC-SS-EEE
T ss_pred CCCcceEEcCCCC-EEEEEecCCcCCCCCEEEEEEecCCC-cc-CCeEEEECCCCCCCeEEECCCCC-EEEec-CC-cEE
Confidence 4567899999997 77776655 789999986532 10 00111 11233456789999998 65554 44 499
Q ss_pred EEECCCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEe
Q 018322 303 IWDTRVGKSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHD 349 (358)
Q Consensus 303 iwD~r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwD 349 (358)
+|+... ..+..+..+. .+..++|.+++ ..|..++.++ +..++
T Consensus 262 ~~~~~g--~~~~~~~~~~-~~~~~~f~~d~-~~L~it~~~~-l~~~~ 303 (305)
T 3dr2_A 262 VFDSDG--QLLGHIPTPG-TASNCTFDQAQ-QRLFITGGPC-LWMLP 303 (305)
T ss_dssp EECTTS--CEEEEEECSS-CCCEEEECTTS-CEEEEEETTE-EEEEE
T ss_pred EECCCC--CEEEEEECCC-ceeEEEEeCCC-CEEEEEcCCe-EEEEE
Confidence 999843 4555555444 58889999888 5555555554 43333
No 226
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.94 E-value=0.001 Score=58.39 Aligned_cols=154 Identities=16% Similarity=0.160 Sum_probs=103.0
Q ss_pred EEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCeEEEEe
Q 018322 170 RIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGD 249 (358)
Q Consensus 170 ~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~l~sgs 249 (358)
.+.+. +..+.++.-.++.|.++|..+ .+.+..+..-....+.|++ ++. +|+++.
T Consensus 70 Gi~~~--g~~lyv~t~~~~~v~viD~~t---------------------~~v~~~i~~g~~~g~glt~--Dg~-~l~vs~ 123 (266)
T 2iwa_A 70 GLTLL--NEKLYQVVWLKNIGFIYDRRT---------------------LSNIKNFTHQMKDGWGLAT--DGK-ILYGSD 123 (266)
T ss_dssp EEEEE--TTEEEEEETTCSEEEEEETTT---------------------TEEEEEEECCSSSCCEEEE--CSS-SEEEEC
T ss_pred EEEEe--CCEEEEEEecCCEEEEEECCC---------------------CcEEEEEECCCCCeEEEEE--CCC-EEEEEC
Confidence 34444 435666666789999999876 3444445321245556655 565 666666
Q ss_pred CCCcEEEEecCCCCCcccCCCccccC---CCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEecC-------
Q 018322 250 CNSCIYLWEPASDATWNVDPNPFIGH---SASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAH------- 319 (358)
Q Consensus 250 ~dg~I~lwd~~~~~~~~~~~~~~~~h---~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h------- 319 (358)
.++.|.++|..+...... .....+ -..++.+.|. ++. +++....++.|.+.|+.++ ..+..+...
T Consensus 124 gs~~l~viD~~t~~v~~~--I~Vg~~~~p~~~~nele~~-dg~-lyvn~~~~~~V~vID~~tg-~V~~~I~~~g~~~~~~ 198 (266)
T 2iwa_A 124 GTSILYEIDPHTFKLIKK--HNVKYNGHRVIRLNELEYI-NGE-VWANIWQTDCIARISAKDG-TLLGWILLPNLRKKLI 198 (266)
T ss_dssp SSSEEEEECTTTCCEEEE--EECEETTEECCCEEEEEEE-TTE-EEEEETTSSEEEEEETTTC-CEEEEEECHHHHHHHH
T ss_pred CCCeEEEEECCCCcEEEE--EEECCCCcccccceeEEEE-CCE-EEEecCCCCeEEEEECCCC-cEEEEEECCCcccccc
Confidence 788999999876432110 011111 1246778888 565 8888878899999999985 455555321
Q ss_pred ------CCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 320 ------NADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 320 ------~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
....+.|+|+|++.++++++...+.|.+.++....
T Consensus 199 ~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~~ 239 (266)
T 2iwa_A 199 DEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLVR 239 (266)
T ss_dssp HTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEECC
T ss_pred cccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEeccc
Confidence 13569999999987889999889999999887653
No 227
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.88 E-value=0.0021 Score=55.37 Aligned_cols=135 Identities=18% Similarity=0.256 Sum_probs=88.8
Q ss_pred CCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCeEEEEeCCCcEEE
Q 018322 177 NPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYL 256 (358)
Q Consensus 177 ~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~l~sgs~dg~I~l 256 (358)
+..+....-.++.+.+||..+ .+.+.++.. ...+++|++. +. .|+.+..++.|.+
T Consensus 74 ~~~ly~ltw~~~~v~v~D~~t---------------------l~~~~ti~~-~~~Gwglt~d--g~-~L~vSdgs~~l~~ 128 (243)
T 3mbr_X 74 RDRLIQLTWRNHEGFVYDLAT---------------------LTPRARFRY-PGEGWALTSD--DS-HLYMSDGTAVIRK 128 (243)
T ss_dssp TTEEEEEESSSSEEEEEETTT---------------------TEEEEEEEC-SSCCCEEEEC--SS-CEEEECSSSEEEE
T ss_pred CCEEEEEEeeCCEEEEEECCc---------------------CcEEEEEeC-CCCceEEeeC--CC-EEEEECCCCeEEE
Confidence 445666666789999999987 455555543 2466778754 44 6666667889999
Q ss_pred EecCCCCCcccCCCccccCC---CcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEec-------------CC
Q 018322 257 WEPASDATWNVDPNPFIGHS---ASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKA-------------HN 320 (358)
Q Consensus 257 wd~~~~~~~~~~~~~~~~h~---~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~-------------h~ 320 (358)
+|..+...... .....+. ..++.+.|. ++. +++....+..|.+.|.+++ ..+..+.. -.
T Consensus 129 iDp~t~~~~~~--I~V~~~g~~~~~lNeLe~~-~G~-lyanvw~s~~I~vIDp~tG-~V~~~idl~~l~~~~~~~~~~~~ 203 (243)
T 3mbr_X 129 LDPDTLQQVGS--IKVTAGGRPLDNLNELEWV-NGE-LLANVWLTSRIARIDPASG-KVVAWIDLQALVPDADALTDSTN 203 (243)
T ss_dssp ECTTTCCEEEE--EECEETTEECCCEEEEEEE-TTE-EEEEETTTTEEEEECTTTC-BEEEEEECGGGSTTTTSCCCTTS
T ss_pred EeCCCCeEEEE--EEEccCCcccccceeeEEe-CCE-EEEEECCCCeEEEEECCCC-CEEEEEECCcCccccccccCCcC
Confidence 99877432111 1111121 345667776 565 8888878889999999986 34444431 11
Q ss_pred CCeEEEEEeCCCCcEEEEEeC
Q 018322 321 ADVNVISWNRLASCLLASGSD 341 (358)
Q Consensus 321 ~~V~~i~~~p~~~~~lasgs~ 341 (358)
.-.|.|+|+|.+.++++||=.
T Consensus 204 ~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 204 DVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp SCEEEEEEETTTTEEEEEETT
T ss_pred CceEEEEEcCCCCEEEEECCC
Confidence 356999999988677887743
No 228
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.85 E-value=0.00095 Score=61.83 Aligned_cols=153 Identities=14% Similarity=0.086 Sum_probs=94.4
Q ss_pred EEEEcCCCCcEEEEEe---------CCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCC-------CCCeE
Q 018322 170 RIRAMTQNPHICASWA---------DTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGH-------KDEGY 233 (358)
Q Consensus 170 ~i~~~p~~~~~lat~s---------~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-------~~~v~ 233 (358)
.+.++|++..++++.+ .++.|.+||..+ .+.+..+.-. .....
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t---------------------~~v~~~I~v~~g~r~~~g~~P~ 140 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVT---------------------LLPTADIELPDAPRFLVGTYPW 140 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT---------------------CCEEEEEEETTCCCCCBSCCGG
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCC---------------------CeEEEEEECCCccccccCCCCc
Confidence 3999999965655542 467899999987 3444443211 12456
Q ss_pred EEEeCCCCCCeEEEEeC--CCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCC
Q 018322 234 AIDWNPITTGRLVTGDC--NSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKS 311 (358)
Q Consensus 234 ~l~~s~~~~~~l~sgs~--dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~ 311 (358)
.+.++|++. +|+++.. ++.|.++|+.+... . ..+.. ..+ ..+.|.+...|++.+.||.+.+.++.....
T Consensus 141 ~~a~spDGk-~lyVan~~~~~~VsVID~~t~~v-v---~tI~v--~g~--~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~ 211 (386)
T 3sjl_D 141 MTSLTPDGK-TLLFYQFSPAPAVGVVDLEGKAF-K---RMLDV--PDC--YHIFPTAPDTFFMHCRDGSLAKVAFGTEGT 211 (386)
T ss_dssp GEEECTTSS-EEEEEECSSSCEEEEEETTTTEE-E---EEEEC--CSE--EEEEEEETTEEEEEETTSCEEEEECCSSSC
T ss_pred eEEEcCCCC-EEEEEEcCCCCeEEEEECCCCcE-E---EEEEC--CCc--ceeecCCCceeEEECCCCCEEEEECCCCCe
Confidence 799999998 7777753 68999999987422 2 12211 111 122355544788889999999999976323
Q ss_pred eeEEEecC----CCCe-EEEEEe-CCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 312 ALTSFKAH----NADV-NVISWN-RLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 312 ~~~~~~~h----~~~V-~~i~~~-p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
.......+ ...+ +...|. ++| ++++ .+.+|+|.+.|+....
T Consensus 212 v~~~~~~~~~~~~~~~~~~~~~~~~dG-~~~~-vs~~g~V~v~d~~~~~ 258 (386)
T 3sjl_D 212 PEITHTEVFHPEDEFLINHPAYSQKAG-RLVW-PTYTGKIHQIDLSSGD 258 (386)
T ss_dssp CEEEECCCCSCTTSCBCSCCEEETTTT-EEEE-EBTTSEEEEEECTTSS
T ss_pred EEEeecceeccccccccccceeEcCCC-cEEE-EeCCCEEEEEECCCCc
Confidence 22211111 1122 224664 566 5544 5568999999997653
No 229
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.76 E-value=0.0057 Score=53.15 Aligned_cols=159 Identities=11% Similarity=-0.037 Sum_probs=101.2
Q ss_pred CceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCeE
Q 018322 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRL 245 (358)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~l 245 (358)
.....+.+.+.+..++++-...+.|.++++... ...............++++|.+. .|
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~---------------------~~~~~~~~~~~~P~~i~vd~~~g-~l 136 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGT---------------------QRRVLFDTGLVNPRGIVTDPVRG-NL 136 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---------------------SCEEEECSSCSSEEEEEEETTTT-EE
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCC---------------------CEEEEEECCCCCccEEEEeeCCC-EE
Confidence 567899999976577777777889999998651 11111221224567999999764 55
Q ss_pred EEEeC---CCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEecCCCC
Q 018322 246 VTGDC---NSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNAD 322 (358)
Q Consensus 246 ~sgs~---dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~ 322 (358)
..+.. .+.|..+++....... ...........++++|++..++++....+.|.++|+... .....+. ....
T Consensus 137 yv~~~~~~~~~I~~~~~dg~~~~~----~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~-~~~~~~~-~~~~ 210 (267)
T 1npe_A 137 YWTDWNRDNPKIETSHMDGTNRRI----LAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP-GRRKVLE-GLQY 210 (267)
T ss_dssp EEEECCSSSCEEEEEETTSCCCEE----EECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEE-EEEEEEE-CCCS
T ss_pred EEEECCCCCcEEEEEecCCCCcEE----EEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCC-ceEEEec-CCCC
Confidence 55543 3688888875321111 011123457889999987757777778899999998752 2222222 2233
Q ss_pred eEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 323 VNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 323 V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
...|+.. .+ .++++....+.|.++|..+++
T Consensus 211 P~gi~~d-~~-~lyva~~~~~~v~~~d~~~g~ 240 (267)
T 1npe_A 211 PFAVTSY-GK-NLYYTDWKTNSVIAMDLAISK 240 (267)
T ss_dssp EEEEEEE-TT-EEEEEETTTTEEEEEETTTTE
T ss_pred ceEEEEe-CC-EEEEEECCCCeEEEEeCCCCC
Confidence 4566665 34 666666667899999987654
No 230
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.71 E-value=0.0015 Score=56.90 Aligned_cols=147 Identities=17% Similarity=0.248 Sum_probs=91.9
Q ss_pred CceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCeE
Q 018322 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRL 245 (358)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~l 245 (358)
......-..+.+..+.+..-.++.+.+||..+ .+.+.++.. ..++++|++ ++. .|
T Consensus 85 ~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t---------------------~~~~~ti~~-~~eG~glt~--dg~-~L 139 (262)
T 3nol_A 85 KRYFGEGISDWKDKIVGLTWKNGLGFVWNIRN---------------------LRQVRSFNY-DGEGWGLTH--NDQ-YL 139 (262)
T ss_dssp TTCCEEEEEEETTEEEEEESSSSEEEEEETTT---------------------CCEEEEEEC-SSCCCCEEE--CSS-CE
T ss_pred CccceeEEEEeCCEEEEEEeeCCEEEEEECcc---------------------CcEEEEEEC-CCCceEEec--CCC-EE
Confidence 33433333333445655555788999999987 455666654 235667775 454 66
Q ss_pred EEEeCCCcEEEEecCCCCCcccCCCccccCC-CcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEecC-----
Q 018322 246 VTGDCNSCIYLWEPASDATWNVDPNPFIGHS-ASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAH----- 319 (358)
Q Consensus 246 ~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~-~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h----- 319 (358)
+.++.++.|.++|..+............+.. ..++.+.|. ++. +++....+..|.+.|.+++ ..+..+...
T Consensus 140 ~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~-lyan~w~~~~I~vIDp~tG-~V~~~Id~~~L~~~ 216 (262)
T 3nol_A 140 IMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGE-IFANVWQTNKIVRIDPETG-KVTGIIDLNGILAE 216 (262)
T ss_dssp EECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTE-EEEEETTSSEEEEECTTTC-BEEEEEECTTGGGG
T ss_pred EEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCE-EEEEEccCCeEEEEECCCC-cEEEEEECCcCccc
Confidence 6666678899999877432211001011111 345667776 565 8888888999999999985 454444321
Q ss_pred -------CCCeEEEEEeCCCCcEEEEEe
Q 018322 320 -------NADVNVISWNRLASCLLASGS 340 (358)
Q Consensus 320 -------~~~V~~i~~~p~~~~~lasgs 340 (358)
....|.|+|+|.+.++++||-
T Consensus 217 ~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 217 AGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp SCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred cccccCcCCceEEEEEcCCCCEEEEECC
Confidence 235699999999867777763
No 231
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.67 E-value=0.0005 Score=64.68 Aligned_cols=140 Identities=7% Similarity=-0.061 Sum_probs=84.6
Q ss_pred CCcEEEEEeCC----CcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCeEEEEe---
Q 018322 177 NPHICASWADT----GHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGD--- 249 (358)
Q Consensus 177 ~~~~lat~s~d----g~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~l~sgs--- 249 (358)
+..++++...+ +.|.++|..+ .+.+..+..-..+ .+.++|++. +|+++.
T Consensus 84 ~~~vyV~n~~~~~~~~~VsVID~~t---------------------~~vv~~I~vG~~P--gia~SpDgk-~lyVan~~~ 139 (426)
T 3c75_H 84 ARRVYIQDPAHFAAITQQFVIDGST---------------------GRILGMTDGGFLP--HPVAAEDGS-FFAQASTVF 139 (426)
T ss_dssp TTEEEEEECTTTCSSEEEEEEETTT---------------------TEEEEEEEECSSC--EEEECTTSS-CEEEEEEEE
T ss_pred CCEEEEECCCcCCCCCeEEEEECCC---------------------CEEEEEEECCCCC--ceEECCCCC-EEEEEeccc
Confidence 33455554443 7999999987 3455555433334 799999998 666665
Q ss_pred -------CCCcEEEEecCCCCCcccCCCccc-c------CCCcEEEEEECCCCCCEEEEEE-C-CCcEEEEECCCCCCee
Q 018322 250 -------CNSCIYLWEPASDATWNVDPNPFI-G------HSASVEDLQWSPTEPDVFASCS-V-DGHIAIWDTRVGKSAL 313 (358)
Q Consensus 250 -------~dg~I~lwd~~~~~~~~~~~~~~~-~------h~~~V~~v~~sp~~~~~las~s-~-Dg~I~iwD~r~~~~~~ 313 (358)
.++.|.++|..+... . ..+. + .......+.|+|+++ .++.+. . ++.|.+.|+.+. +.+
T Consensus 140 ~~~~~G~~~~~VsviD~~t~~v-v---~~I~v~g~~r~~~g~~P~~~~~spDGk-~lyV~n~~~~~~VsVID~~t~-kvv 213 (426)
T 3c75_H 140 ERIARGKRTDYVEVFDPVTFLP-I---ADIELPDAPRFLVGTYQWMNALTPDNK-NLLFYQFSPAPAVGVVDLEGK-TFD 213 (426)
T ss_dssp EETTEEEEEEEEEEECTTTCCE-E---EEEEETTCCCCCBSCCGGGSEECTTSS-EEEEEECSSSCEEEEEETTTT-EEE
T ss_pred cccccCCCCCEEEEEECCCCcE-E---EEEECCCccccccCCCcceEEEcCCCC-EEEEEecCCCCeEEEEECCCC-eEE
Confidence 467899999987432 1 1111 0 112345689999999 455544 3 689999999984 455
Q ss_pred EEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeC
Q 018322 314 TSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDL 350 (358)
Q Consensus 314 ~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDl 350 (358)
.++..-. +....|.+...+++.+.||++.+.++
T Consensus 214 ~~I~v~g----~~~~~p~g~~~~v~~~~dG~~~~V~~ 246 (426)
T 3c75_H 214 RMLDVPD----CYHIFPASPTVFYMNCRDGSLARVDF 246 (426)
T ss_dssp EEEECCS----EEEEEEEETTEEEEEETTSSEEEEEC
T ss_pred EEEEcCC----ceeeccCCCcEEEEEcCCCCEEEEEC
Confidence 5553211 12233333345555555666666555
No 232
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.67 E-value=0.012 Score=51.24 Aligned_cols=165 Identities=10% Similarity=0.082 Sum_probs=104.9
Q ss_pred cCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEE--cCCCCCeEEEEeCCC
Q 018322 163 AHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF--GGHKDEGYAIDWNPI 240 (358)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~l~~s~~ 240 (358)
+-.+.+..+.|+|++..++|+...++.|...|... +.+..+ .+. ....+|++.+.
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g----------------------~v~~~i~l~g~-~D~EGIa~~~~ 80 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNG----------------------DLIRTIPLDFV-KDLETIEYIGD 80 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETTC----------------------CEEEEEECSSC-SSEEEEEECST
T ss_pred CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCCC----------------------CEEEEEecCCC-CChHHeEEeCC
Confidence 45578999999998767888888889998888864 222222 332 45778888877
Q ss_pred CCCeEEEEeCCCcEEEEecCCCCC-cccCCC--cc--ccCCCcEEEEEECCCCCCEEEEEECCC-cEEEEECCCCCCeeE
Q 018322 241 TTGRLVTGDCNSCIYLWEPASDAT-WNVDPN--PF--IGHSASVEDLQWSPTEPDVFASCSVDG-HIAIWDTRVGKSALT 314 (358)
Q Consensus 241 ~~~~l~sgs~dg~I~lwd~~~~~~-~~~~~~--~~--~~h~~~V~~v~~sp~~~~~las~s~Dg-~I~iwD~r~~~~~~~ 314 (358)
+. ++++.-.++.+.++++...+. +..... .+ .......+.|+|+|.+..++++.-.+. .|..|+-......+.
T Consensus 81 g~-~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~ 159 (255)
T 3qqz_A 81 NQ-FVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELH 159 (255)
T ss_dssp TE-EEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCE
T ss_pred CE-EEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCcee
Confidence 75 656655678899998866443 111011 11 123556899999999874666555444 455555111111122
Q ss_pred EEe-------cCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCC
Q 018322 315 SFK-------AHNADVNVISWNRLASCLLASGSDDGTFSIHDLR 351 (358)
Q Consensus 315 ~~~-------~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr 351 (358)
.+. .+...+..|+++|...++++.......|.++|..
T Consensus 160 i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~ 203 (255)
T 3qqz_A 160 ISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV 203 (255)
T ss_dssp EEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred eecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC
Confidence 221 1334678999999876777777777778888765
No 233
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.66 E-value=0.0043 Score=54.38 Aligned_cols=162 Identities=7% Similarity=-0.032 Sum_probs=102.1
Q ss_pred EEEecCCCc--eeEEEEcCCCCcEEEEEeC--CCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEc-CCCCCeE
Q 018322 159 LRKVAHQGC--VNRIRAMTQNPHICASWAD--TGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG-GHKDEGY 233 (358)
Q Consensus 159 ~~~~~H~~~--V~~i~~~p~~~~~lat~s~--dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~ 233 (358)
...++|... ...+.|++++ .++++.+. ++.|+++|+.+ .+.+..+. +......
T Consensus 12 v~~~p~~~~~f~~Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~t---------------------g~v~~~i~l~~~~fge 69 (266)
T 2iwa_A 12 LNEFPHDPYAFTQGLVYAEND-TLFESTGLYGRSSVRQVALQT---------------------GKVENIHKMDDSYFGE 69 (266)
T ss_dssp EEEEECCTTCCEEEEEECSTT-EEEEEECSTTTCEEEEEETTT---------------------CCEEEEEECCTTCCEE
T ss_pred EEEEECCCCCCcccEEEeCCC-eEEEECCCCCCCEEEEEECCC---------------------CCEEEEEecCCCcceE
Confidence 566678754 5799999986 66666553 57999999987 34444432 1122334
Q ss_pred EEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCee
Q 018322 234 AIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSAL 313 (358)
Q Consensus 234 ~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~ 313 (358)
.+++. +..+.++.-.++.+.++|..+... . ..+..-... ...+++++..++++- .++.|.++|..+. ..+
T Consensus 70 Gi~~~--g~~lyv~t~~~~~v~viD~~t~~v-~---~~i~~g~~~--g~glt~Dg~~l~vs~-gs~~l~viD~~t~-~v~ 139 (266)
T 2iwa_A 70 GLTLL--NEKLYQVVWLKNIGFIYDRRTLSN-I---KNFTHQMKD--GWGLATDGKILYGSD-GTSILYEIDPHTF-KLI 139 (266)
T ss_dssp EEEEE--TTEEEEEETTCSEEEEEETTTTEE-E---EEEECCSSS--CCEEEECSSSEEEEC-SSSEEEEECTTTC-CEE
T ss_pred EEEEe--CCEEEEEEecCCEEEEEECCCCcE-E---EEEECCCCC--eEEEEECCCEEEEEC-CCCeEEEEECCCC-cEE
Confidence 55554 331444455688999999976322 2 222111011 123445677566665 6889999999884 344
Q ss_pred EEEec--CC---CCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 314 TSFKA--HN---ADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 314 ~~~~~--h~---~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
..+.. +. ..++.+.|. ++ .+++....++.|.+.|..+++
T Consensus 140 ~~I~Vg~~~~p~~~~nele~~-dg-~lyvn~~~~~~V~vID~~tg~ 183 (266)
T 2iwa_A 140 KKHNVKYNGHRVIRLNELEYI-NG-EVWANIWQTDCIARISAKDGT 183 (266)
T ss_dssp EEEECEETTEECCCEEEEEEE-TT-EEEEEETTSSEEEEEETTTCC
T ss_pred EEEEECCCCcccccceeEEEE-CC-EEEEecCCCCeEEEEECCCCc
Confidence 44432 11 247888998 66 777777678899999998876
No 234
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.61 E-value=0.0037 Score=56.10 Aligned_cols=178 Identities=12% Similarity=-0.020 Sum_probs=97.3
Q ss_pred CceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCc-cccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCe
Q 018322 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHL-NALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGR 244 (358)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~ 244 (358)
.....+.+.+++ .++.++..++.|..|+..... ..+........ ....................+|++.+... .
T Consensus 19 ~~p~~i~~d~~g-~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~p~gi~~~~~~g-~ 93 (322)
T 2fp8_A 19 YAPNSFTFDSTN-KGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWN---KAFCENSTDAEKRPLCGRTYDISYNLQNN-Q 93 (322)
T ss_dssp SCCCCEECCTTC-SSEEEECTTSEEEEECCTTTCEEEEEESCTTCC---HHHHTTCCCGGGHHHHCCEEEEEEETTTT-E
T ss_pred CCceEEEEcCCC-CEEEEEcCCCeEEEECCCCCceEEEeccccccc---ccccccccchhccccCCCCceEEEcCCCC-c
Confidence 456778888887 656677888999999876521 00000000000 00000000000000012468899987332 5
Q ss_pred EEEEeCCCcEEEEecCCCCCcccCCCcccc-CCCcEEEEEECC-CCCCEEEEEEC-----------------CCcEEEEE
Q 018322 245 LVTGDCNSCIYLWEPASDATWNVDPNPFIG-HSASVEDLQWSP-TEPDVFASCSV-----------------DGHIAIWD 305 (358)
Q Consensus 245 l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~-h~~~V~~v~~sp-~~~~~las~s~-----------------Dg~I~iwD 305 (358)
|+.++..+.|..+|...+ ..........+ .....+++++.+ ++. ++++-.. .+.|..||
T Consensus 94 l~v~d~~~~i~~~d~~~g-~~~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d 171 (322)
T 2fp8_A 94 LYIVDCYYHLSVVGSEGG-HATQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYD 171 (322)
T ss_dssp EEEEETTTEEEEECTTCE-ECEEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCEEEEEEE
T ss_pred EEEEECCCCEEEEeCCCC-EEEEecccCCCCcccccceEEEecCCCE-EEEECCcccccccccceehcccCCCceEEEEe
Confidence 666665666888887542 11100111111 123578999999 887 6666432 36788888
Q ss_pred CCCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCC
Q 018322 306 TRVGKSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRL 352 (358)
Q Consensus 306 ~r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~ 352 (358)
...+. +..+.......+.|+|+|++..++++-...+.|.+|++..
T Consensus 172 ~~~~~--~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 172 PSTKE--TTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp TTTTE--EEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred CCCCE--EEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 76532 2222222234578999999833555556678999999874
No 235
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.59 E-value=0.002 Score=60.59 Aligned_cols=160 Identities=12% Similarity=0.121 Sum_probs=95.9
Q ss_pred EEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcE----EEcCCCCCe-EEEEeCCCCCCeEE
Q 018322 172 RAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLV----KFGGHKDEG-YAIDWNPITTGRLV 246 (358)
Q Consensus 172 ~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~h~~~v-~~l~~s~~~~~~l~ 246 (358)
...|.+...+++.+.||++.+.++... +... .+.....++ ..+.+.+++. .++
T Consensus 223 ~~~p~g~~~~v~~~~dG~~~~V~~~~~---------------------~v~~~~~~~~~v~~~p~~~~~~~~~dg~-~~~ 280 (426)
T 3c75_H 223 HIFPASPTVFYMNCRDGSLARVDFADG---------------------ETKVTNTEVFHTEDELLINHPAFSLRSG-RLV 280 (426)
T ss_dssp EEEEEETTEEEEEETTSSEEEEECCTT---------------------CCEEEECCCCSCTTSCBCSCCEECTTTC-EEE
T ss_pred eeccCCCcEEEEEcCCCCEEEEECCCC---------------------cEEEEeeeeeccCCCceeeEeeecCCCC-EEE
Confidence 344555466777788898888888331 1110 011111111 1356788877 555
Q ss_pred EEeCCCcEEEEecCCCCCcccCCCccc-----c---CCCcEEEEEECCCCCCEEEEEEC---------CCcEEEEECCCC
Q 018322 247 TGDCNSCIYLWEPASDATWNVDPNPFI-----G---HSASVEDLQWSPTEPDVFASCSV---------DGHIAIWDTRVG 309 (358)
Q Consensus 247 sgs~dg~I~lwd~~~~~~~~~~~~~~~-----~---h~~~V~~v~~sp~~~~~las~s~---------Dg~I~iwD~r~~ 309 (358)
..+..+.|.+.|.............+. . .......++++|++..++++... .+.|.++|+.+.
T Consensus 281 ~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~ 360 (426)
T 3c75_H 281 WPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETG 360 (426)
T ss_dssp EEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTC
T ss_pred EEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCC
Confidence 556678999999865321111000000 0 11122236899998856666542 357999999985
Q ss_pred CCeeEEEecCCCCeEEEEEeCCCCcEEEEEe-CCCCEEEEeCCCCCC
Q 018322 310 KSALTSFKAHNADVNVISWNRLASCLLASGS-DDGTFSIHDLRLLKV 355 (358)
Q Consensus 310 ~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs-~Dg~i~iwDlr~~~~ 355 (358)
+.+.++... .....|.|+|++..++++.. .++.|.++|+.+++.
T Consensus 361 -kvv~~I~vg-~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kv 405 (426)
T 3c75_H 361 -ERINKIELG-HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEE 405 (426)
T ss_dssp -CEEEEEEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCE
T ss_pred -eEEEEEECC-CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCE
Confidence 466666422 24788999999942666666 689999999998763
No 236
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.58 E-value=0.025 Score=50.71 Aligned_cols=167 Identities=11% Similarity=-0.058 Sum_probs=101.3
Q ss_pred cCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCC
Q 018322 163 AHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITT 242 (358)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~ 242 (358)
........+.|.+.+..++.+-...+.|+.+++..... .......+........+|++.+.+.
T Consensus 27 ~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~-----------------~~~~~~~~~~~~~~p~glavd~~~~ 89 (316)
T 1ijq_A 27 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG-----------------VSSYDTVISRDIQAPDGLAVDWIHS 89 (316)
T ss_dssp CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC-------------------------CEEEECSSCSCCCEEEEETTTT
T ss_pred cCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCC-----------------CcccEEEEeCCCCCcCEEEEeecCC
Confidence 44566789999987657777777788999998865100 0011112222223345677765554
Q ss_pred CeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECC-CcEEEEECCCCCCeeEEE-ecCC
Q 018322 243 GRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVD-GHIAIWDTRVGKSALTSF-KAHN 320 (358)
Q Consensus 243 ~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~D-g~I~iwD~r~~~~~~~~~-~~h~ 320 (358)
.++++-...+.|.+.++... ... ..+........+++++|.+..++.+.... +.|..+++... ....+ ...-
T Consensus 90 ~ly~~d~~~~~I~~~~~~g~-~~~---~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~--~~~~~~~~~~ 163 (316)
T 1ijq_A 90 NIYWTDSVLGTVSVADTKGV-KRK---TLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV--DIYSLVTENI 163 (316)
T ss_dssp EEEEEETTTTEEEEEETTSS-SEE---EEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC--CEEEEECSSC
T ss_pred eEEEEECCCCEEEEEeCCCC-ceE---EEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC--CeEEEEECCC
Confidence 24455566789999988542 111 11122234678999999776566665544 78888887642 22222 2234
Q ss_pred CCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCC
Q 018322 321 ADVNVISWNRLASCLLASGSDDGTFSIHDLRL 352 (358)
Q Consensus 321 ~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~ 352 (358)
...+.|+|.+++..++++-+..+.|..+|+..
T Consensus 164 ~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 164 QWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEEeccCCEEEEEECCCCeEEEEecCC
Confidence 56789999987746666666677899999864
No 237
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.50 E-value=0.0026 Score=55.43 Aligned_cols=135 Identities=14% Similarity=0.163 Sum_probs=90.3
Q ss_pred CCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCeEEEEeCCCcEE
Q 018322 176 QNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIY 255 (358)
Q Consensus 176 ~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~l~sgs~dg~I~ 255 (358)
.+..+.+..-.++.+.+||..+ .+.+.++.. ..++++|++ ++. .|+.++.++.|.
T Consensus 104 ~g~~Ly~ltw~~~~v~V~D~~T---------------------l~~~~ti~~-~~eGwGLt~--Dg~-~L~vSdGs~~l~ 158 (268)
T 3nok_A 104 DGERLYQLTWTEGLLFTWSGMP---------------------PQRERTTRY-SGEGWGLCY--WNG-KLVRSDGGTMLT 158 (268)
T ss_dssp CSSCEEEEESSSCEEEEEETTT---------------------TEEEEEEEC-SSCCCCEEE--ETT-EEEEECSSSEEE
T ss_pred eCCEEEEEEccCCEEEEEECCc---------------------CcEEEEEeC-CCceeEEec--CCC-EEEEECCCCEEE
Confidence 3435666666789999999987 455555553 345677775 455 677777788999
Q ss_pred EEecCCCCCcccCCCccccCC---CcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEecC-------------
Q 018322 256 LWEPASDATWNVDPNPFIGHS---ASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAH------------- 319 (358)
Q Consensus 256 lwd~~~~~~~~~~~~~~~~h~---~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h------------- 319 (358)
++|..+...... .....+. ..++.+.|. ++. +++....+..|.+.|.+++ ..+..+...
T Consensus 159 ~iDp~T~~v~~~--I~V~~~g~~v~~lNeLe~~-dG~-lyanvw~s~~I~vIDp~TG-~V~~~Idl~~L~~~~~~~~~~~ 233 (268)
T 3nok_A 159 FHEPDGFALVGA--VQVKLRGQPVELINELECA-NGV-IYANIWHSSDVLEIDPATG-TVVGVIDASALTRAVAGQVTNP 233 (268)
T ss_dssp EECTTTCCEEEE--EECEETTEECCCEEEEEEE-TTE-EEEEETTCSEEEEECTTTC-BEEEEEECHHHHHHHTTTCCCT
T ss_pred EEcCCCCeEEEE--EEeCCCCcccccccccEEe-CCE-EEEEECCCCeEEEEeCCCC-cEEEEEECCCCcccccccccCc
Confidence 999877432111 1111122 245677887 665 8888878899999999985 344444221
Q ss_pred CCCeEEEEEeCCCCcEEEEEe
Q 018322 320 NADVNVISWNRLASCLLASGS 340 (358)
Q Consensus 320 ~~~V~~i~~~p~~~~~lasgs 340 (358)
..-.|.|+|+|.+.++++||=
T Consensus 234 ~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 234 EAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp TCCEEEEEECTTTCCEEEEET
T ss_pred CCceEEEEEcCCCCEEEEeCC
Confidence 235699999998878888874
No 238
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.49 E-value=0.016 Score=52.88 Aligned_cols=162 Identities=7% Similarity=-0.101 Sum_probs=102.7
Q ss_pred CCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCC
Q 018322 164 HQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTG 243 (358)
Q Consensus 164 H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~ 243 (358)
....+..+.|.+.+..++.+-...+.|+.+++... .....+........+|++.+.+..
T Consensus 71 ~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~---------------------~~~~~~~~~~~~p~glavd~~~g~ 129 (349)
T 3v64_C 71 NLENAIALDFHHRRELVFWSDVTLDRILRANLNGS---------------------NVEEVVSTGLESPGGLAVDWVHDK 129 (349)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---------------------SCEEEECSSCSCCCEEEEETTTTE
T ss_pred CCCceEEEEEeccccEEEEEeccCCceEEEecCCC---------------------CceEEEeCCCCCccEEEEecCCCe
Confidence 34557899999876577777667788988888751 111222222223456677665542
Q ss_pred eEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECC-CcEEEEECCCCCCeeEEE-ecCCC
Q 018322 244 RLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVD-GHIAIWDTRVGKSALTSF-KAHNA 321 (358)
Q Consensus 244 ~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~D-g~I~iwD~r~~~~~~~~~-~~h~~ 321 (358)
++++-...+.|.+.++....... .+........+|+++|.+..++.+-... +.|..+++.... ...+ ...-.
T Consensus 130 ly~~d~~~~~I~~~~~dG~~~~~----l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~--~~~~~~~~~~ 203 (349)
T 3v64_C 130 LYWTDSGTSRIEVANLDGAHRKV----LLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG--RRIIADTHLF 203 (349)
T ss_dssp EEEEETTTTEEEEEETTSCSCEE----EECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS--CEESCCSSCS
T ss_pred EEEEcCCCCeEEEEcCCCCceEE----EEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC--cEEEEECCCC
Confidence 45555567789999885422111 1122335678999999777577776666 888888886522 2222 22334
Q ss_pred CeEEEEEeCCCCcEEEEEeCCCCEEEEeCCC
Q 018322 322 DVNVISWNRLASCLLASGSDDGTFSIHDLRL 352 (358)
Q Consensus 322 ~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~ 352 (358)
..+.|+|+|.+..++++-...+.|..+|+..
T Consensus 204 ~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG 234 (349)
T 3v64_C 204 WPNGLTIDYAGRRMYWVDAKHHVIERANLDG 234 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CcceEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 5789999987746666666677899998764
No 239
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.48 E-value=0.0092 Score=55.25 Aligned_cols=163 Identities=7% Similarity=-0.100 Sum_probs=102.1
Q ss_pred CCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCC
Q 018322 164 HQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTG 243 (358)
Q Consensus 164 H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~ 243 (358)
....+..+.|.+.+..++.+-...+.|+.+++... .....+........+|++.+.+..
T Consensus 114 ~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~---------------------~~~~~~~~~~~~p~glavd~~~g~ 172 (386)
T 3v65_B 114 NLENAIALDFHHRRELVFWSDVTLDRILRANLNGS---------------------NVEEVVSTGLESPGGLAVDWVHDK 172 (386)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---------------------CEEEEECSSCSCCCCEEEETTTTE
T ss_pred CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCC---------------------CcEEEEeCCCCCccEEEEEeCCCe
Confidence 34567889999866577777677788988888751 111222222223446666665542
Q ss_pred eEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECC-CcEEEEECCCCCCeeEEEecCCCC
Q 018322 244 RLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVD-GHIAIWDTRVGKSALTSFKAHNAD 322 (358)
Q Consensus 244 ~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~D-g~I~iwD~r~~~~~~~~~~~h~~~ 322 (358)
++++-...+.|.+.++..... . ..+.........|+++|.+..++.+-... +.|..+++.... ....+...-..
T Consensus 173 lY~~d~~~~~I~~~~~dg~~~-~---~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~~~~~~~ 247 (386)
T 3v65_B 173 LYWTDSGTSRIEVANLDGAHR-K---VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG-RRIIADTHLFW 247 (386)
T ss_dssp EEEEETTTTEEEECBTTSCSC-E---EEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEEEECSSCSC
T ss_pred EEEEcCCCCeEEEEeCCCCce-E---EeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCC-cEEEEECCCCC
Confidence 445555567888888754221 1 11222335678999999877567666655 788888886522 22222233445
Q ss_pred eEEEEEeCCCCcEEEEEeCCCCEEEEeCCC
Q 018322 323 VNVISWNRLASCLLASGSDDGTFSIHDLRL 352 (358)
Q Consensus 323 V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~ 352 (358)
.+.|+|+|.+..++++-+..+.|..+|+..
T Consensus 248 PnGlavd~~~~~lY~aD~~~~~I~~~d~dG 277 (386)
T 3v65_B 248 PNGLTIDYAGRRMYWVDAKHHVIERANLDG 277 (386)
T ss_dssp EEEEEEEGGGTEEEEEETTTTEEEEECTTS
T ss_pred eeeEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 789999987646666666678899998764
No 240
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.47 E-value=0.0055 Score=62.05 Aligned_cols=221 Identities=11% Similarity=0.022 Sum_probs=116.9
Q ss_pred CceeeeChhHHHhhhcccccCcceeEEEE-eccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCCCCC
Q 018322 47 GEELQCDPTAYNSLHAFHIGWPCLSFDIV-RDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELVPNK 125 (358)
Q Consensus 47 ~~~l~~~~~~Y~~~~~~~~~wP~ls~~~~-~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~~~~ 125 (358)
.+++..|+....--|.+. -.-++.|- ||+ .+++.+....+.+...|+|+++..- .
T Consensus 157 ~~~vlld~n~~a~~~~~~---~~~~~~~S~PDG-----------~~lAy~~~~~G~~~~~l~v~dl~~g----~------ 212 (751)
T 2xe4_A 157 AEEVIIDVNQVAEGKAFC---DVMEVKPAPPEH-----------DLVAFSVDMSGNEVYTIEFKRISDP----S------ 212 (751)
T ss_dssp TCEEEEEHHHHTTTCSCC---EEEEEEECTTTT-----------CEEEEEEESSSSSCEEEEEEETTCT----T------
T ss_pred CCEEEechhHhccCCCeE---EEeeeEecCCCC-----------CEEEEEEeCCCCceEEEEEEECCCC----C------
Confidence 467888886654333320 12356788 886 3666666665555567888876310 0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCccCCCCCCCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCC----CcEEEEeCCCCccc
Q 018322 126 PSNDDEDVDSESSDSDEDSDDDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADT----GHVQVWDLRSHLNA 201 (358)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~d----g~V~iwd~~~~~~~ 201 (358)
+. -...+. .....+.|+|++..++.+.... ..|+++++....
T Consensus 213 ----------------------~~---l~~~~~-------~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~-- 258 (751)
T 2xe4_A 213 ----------------------QT---IADKVS-------GTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQ-- 258 (751)
T ss_dssp ----------------------CC---CCCCEE-------EECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCG--
T ss_pred ----------------------Ee---CCcccc-------CceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCc--
Confidence 00 000111 1135678999995555554332 257777776521
Q ss_pred cccccccccCCCCCCCCCCCcEEEc-CCCCCeEEEEeCCCCCCeEEEEe---CCCcEEEEecCCCC-Cc--ccCCCcccc
Q 018322 202 LAESETIVGQGAPQVSNQSPLVKFG-GHKDEGYAIDWNPITTGRLVTGD---CNSCIYLWEPASDA-TW--NVDPNPFIG 274 (358)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~s~~~~~~l~sgs---~dg~I~lwd~~~~~-~~--~~~~~~~~~ 274 (358)
......+. .+......+.|+|++. +|+..+ ....|+++|+.++. .. . .....
T Consensus 259 -----------------~~~~lv~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~l~~~d~~~~~~~~~~~---~l~~~ 317 (751)
T 2xe4_A 259 -----------------SEDVCLYEEHNPLFSAFMYKAADTN-TLCIGSQSPETAEVHLLDLRKGNAHNTLE---IVRPR 317 (751)
T ss_dssp -----------------GGCEEEEECCCTTCEEEEEECTTSS-EEEEEEECSSCEEEEEEESSSCTTCCCEE---ESSCC
T ss_pred -----------------hhcEEEEecCCCceEEEEEECCCCC-EEEEEecCCCCceEEEEECCCCCCCceeE---EeecC
Confidence 11122332 2223456889999998 665544 23467888886632 22 1 11122
Q ss_pred CCCcEEEEEECCCCCCEEEEEECC--C--cEEEEECCCCCCeeEE-EecCCCC--eEEEEEeCCCCcEEEEEeCCCC--E
Q 018322 275 HSASVEDLQWSPTEPDVFASCSVD--G--HIAIWDTRVGKSALTS-FKAHNAD--VNVISWNRLASCLLASGSDDGT--F 345 (358)
Q Consensus 275 h~~~V~~v~~sp~~~~~las~s~D--g--~I~iwD~r~~~~~~~~-~~~h~~~--V~~i~~~p~~~~~lasgs~Dg~--i 345 (358)
......++.|+..+. +++....+ + .|..+|+..+. .... +..|... +..+.+. +..++++...+|. |
T Consensus 318 ~~~~~~s~~~~~g~~-l~~~t~~~~a~~~~L~~~d~~~~~-~~~~~li~~~~~~~l~~~~~~--~~~lv~~~~~~g~~~l 393 (751)
T 2xe4_A 318 EKGVRYDVQMHGTSH-LVILTNEGGAVNHKLLIAPRGQPS-DWSHVLVDHSEDVFMESIAVR--SNYLVVAGRRAGLTRI 393 (751)
T ss_dssp CTTCCEEEEEETTTE-EEEEECTTTCTTCEEEEEETTSTT-CCCCEEECCCSSEEEEEEEEC--SSEEEEEEEETTEEEE
T ss_pred CCCceEEEeeeeCCE-EEEEeCCCCCCCcEEEEEcCCCcc-cceeeEECCCCCcEEEEEEEE--CCEEEEEEEeCCEEEE
Confidence 344556666654443 44444443 2 56666765421 1222 3334443 4445554 4467888888885 5
Q ss_pred EEEeC
Q 018322 346 SIHDL 350 (358)
Q Consensus 346 ~iwDl 350 (358)
.++|+
T Consensus 394 ~~~dl 398 (751)
T 2xe4_A 394 WTMMA 398 (751)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 55665
No 241
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.44 E-value=0.0033 Score=54.84 Aligned_cols=160 Identities=9% Similarity=-0.028 Sum_probs=99.4
Q ss_pred EEEecCCCce--eEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEE
Q 018322 159 LRKVAHQGCV--NRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAID 236 (358)
Q Consensus 159 ~~~~~H~~~V--~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 236 (358)
...++|...- ..+.|.. + .++.+.+.+|.|+++|+.+ .+.+..+.....-+.+++
T Consensus 46 v~~~phd~~~ftqGL~~~~-~-~Ly~stG~~g~v~~iD~~T---------------------gkv~~~~l~~~~FgeGit 102 (268)
T 3nok_A 46 IREYPHATNAFTQGLVFHQ-G-HFFESTGHQGTLRQLSLES---------------------AQPVWMERLGNIFAEGLA 102 (268)
T ss_dssp EEEEECCTTCCEEEEEEET-T-EEEEEETTTTEEEECCSSC---------------------SSCSEEEECTTCCEEEEE
T ss_pred EEEEcCCCccccceEEEEC-C-EEEEEcCCCCEEEEEECCC---------------------CcEEeEECCCCcceeEEE
Confidence 4566776544 6788874 3 7888889999999999987 333443311111223455
Q ss_pred eCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEE
Q 018322 237 WNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSF 316 (358)
Q Consensus 237 ~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~ 316 (358)
... ..+.+..-.++.+.+||..+.... ..+.. ...-..++ +++..+++| ..++.|.++|..+. +.+.++
T Consensus 103 ~~g--~~Ly~ltw~~~~v~V~D~~Tl~~~----~ti~~-~~eGwGLt--~Dg~~L~vS-dGs~~l~~iDp~T~-~v~~~I 171 (268)
T 3nok_A 103 SDG--ERLYQLTWTEGLLFTWSGMPPQRE----RTTRY-SGEGWGLC--YWNGKLVRS-DGGTMLTFHEPDGF-ALVGAV 171 (268)
T ss_dssp ECS--SCEEEEESSSCEEEEEETTTTEEE----EEEEC-SSCCCCEE--EETTEEEEE-CSSSEEEEECTTTC-CEEEEE
T ss_pred EeC--CEEEEEEccCCEEEEEECCcCcEE----EEEeC-CCceeEEe--cCCCEEEEE-CCCCEEEEEcCCCC-eEEEEE
Confidence 543 324444556889999999774321 22221 11113344 456634554 45889999999884 444444
Q ss_pred e--cCC---CCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 317 K--AHN---ADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 317 ~--~h~---~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
. .+. ..+|.+.|. +| .+++..-....|.+.|.++++
T Consensus 172 ~V~~~g~~v~~lNeLe~~-dG-~lyanvw~s~~I~vIDp~TG~ 212 (268)
T 3nok_A 172 QVKLRGQPVELINELECA-NG-VIYANIWHSSDVLEIDPATGT 212 (268)
T ss_dssp ECEETTEECCCEEEEEEE-TT-EEEEEETTCSEEEEECTTTCB
T ss_pred EeCCCCcccccccccEEe-CC-EEEEEECCCCeEEEEeCCCCc
Confidence 2 222 245788888 66 677776677899999998875
No 242
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.43 E-value=0.0037 Score=54.42 Aligned_cols=160 Identities=13% Similarity=0.054 Sum_probs=97.4
Q ss_pred EEEecCCCce--eEEEEcCCCCcEEEEEeCCC--cEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCC-CeE
Q 018322 159 LRKVAHQGCV--NRIRAMTQNPHICASWADTG--HVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKD-EGY 233 (358)
Q Consensus 159 ~~~~~H~~~V--~~i~~~p~~~~~lat~s~dg--~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~ 233 (358)
.+.++|...- ..+.|+ ++ .++.+.+.+| .|+++|+.+ .+.+..+.-... -..
T Consensus 34 v~~~phd~~~ftqGL~~~-~~-~LyestG~~g~S~v~~vD~~T---------------------gkv~~~~~l~~~~Fge 90 (262)
T 3nol_A 34 VHSYPHDTKAFTEGFFYR-NG-YFYESTGLNGRSSIRKVDIES---------------------GKTLQQIELGKRYFGE 90 (262)
T ss_dssp EEEEECCTTCEEEEEEEE-TT-EEEEEEEETTEEEEEEECTTT---------------------CCEEEEEECCTTCCEE
T ss_pred EEEecCCCCcccceEEEE-CC-EEEEECCCCCCceEEEEECCC---------------------CcEEEEEecCCcccee
Confidence 4556787554 788888 45 6777777766 899999987 344444432221 122
Q ss_pred EEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCee
Q 018322 234 AIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSAL 313 (358)
Q Consensus 234 ~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~ 313 (358)
+++. .+..+.+..-.++.+.+||..+.... ..+..- ..-..++ +++..+++|- .++.|.++|..+. ..+
T Consensus 91 Git~--~g~~ly~ltw~~~~v~v~D~~t~~~~----~ti~~~-~eG~glt--~dg~~L~~Sd-Gs~~i~~iDp~T~-~v~ 159 (262)
T 3nol_A 91 GISD--WKDKIVGLTWKNGLGFVWNIRNLRQV----RSFNYD-GEGWGLT--HNDQYLIMSD-GTPVLRFLDPESL-TPV 159 (262)
T ss_dssp EEEE--ETTEEEEEESSSSEEEEEETTTCCEE----EEEECS-SCCCCEE--ECSSCEEECC-SSSEEEEECTTTC-SEE
T ss_pred EEEE--eCCEEEEEEeeCCEEEEEECccCcEE----EEEECC-CCceEEe--cCCCEEEEEC-CCCeEEEEcCCCC-eEE
Confidence 3444 34313334445889999999774332 222211 1112333 4566466664 4788999999884 444
Q ss_pred EEEec--CC---CCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 314 TSFKA--HN---ADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 314 ~~~~~--h~---~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
.++.. .. ..+|.+.|. +| .+++..-.++.|.+.|.++++
T Consensus 160 ~~I~V~~~g~~~~~lNELe~~-~G-~lyan~w~~~~I~vIDp~tG~ 203 (262)
T 3nol_A 160 RTITVTAHGEELPELNELEWV-DG-EIFANVWQTNKIVRIDPETGK 203 (262)
T ss_dssp EEEECEETTEECCCEEEEEEE-TT-EEEEEETTSSEEEEECTTTCB
T ss_pred EEEEeccCCccccccceeEEE-CC-EEEEEEccCCeEEEEECCCCc
Confidence 44432 22 346778887 66 677766677899999988775
No 243
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.35 E-value=0.018 Score=51.88 Aligned_cols=164 Identities=9% Similarity=0.088 Sum_probs=100.6
Q ss_pred CCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcC----CC--CCeEEEEe
Q 018322 164 HQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGG----HK--DEGYAIDW 237 (358)
Q Consensus 164 H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----h~--~~v~~l~~ 237 (358)
...--.+++|.+....++++.-..|+|..|+...... ..+ .+.+ .. ..+.+|.|
T Consensus 11 ~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~-------------------~~~-~~~~~s~~g~~~~~~sGl~~ 70 (334)
T 2p9w_A 11 KNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSH-------------------FNV-VIDGASSNGDGEQQMSGLSL 70 (334)
T ss_dssp TTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCE-------------------EEE-CCTTTCCSSCCSEEEEEEEE
T ss_pred cccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeE-------------------EEE-ecCCccccCCCcceeeEEEE
Confidence 3344557889886645666655889999999864110 000 1111 01 13479999
Q ss_pred ---CCCCCCeEEEEe-------------CCCcEEEEecC---CCCC-cccCCCccc-c-------CCCcEEEEEECCCCC
Q 018322 238 ---NPITTGRLVTGD-------------CNSCIYLWEPA---SDAT-WNVDPNPFI-G-------HSASVEDLQWSPTEP 289 (358)
Q Consensus 238 ---s~~~~~~l~sgs-------------~dg~I~lwd~~---~~~~-~~~~~~~~~-~-------h~~~V~~v~~sp~~~ 289 (358)
.|.+. ++++.. .+..|..+|+. ++.. +...+.... + -...+++++..++|+
T Consensus 71 ~~~D~~gr-L~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gn 149 (334)
T 2p9w_A 71 LTHDNSKR-LFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGN 149 (334)
T ss_dssp SSSSSCCE-EEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSC
T ss_pred eccCCCCc-EEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCC
Confidence 57754 555433 25779999997 4322 221111111 1 113589999999998
Q ss_pred CEEEEEECC-CcEEEEECCCCCCeeEEEe------cCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCC
Q 018322 290 DVFASCSVD-GHIAIWDTRVGKSALTSFK------AHNADVNVISWNRLASCLLASGSDDGTFSIHDLRL 352 (358)
Q Consensus 290 ~~las~s~D-g~I~iwD~r~~~~~~~~~~------~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~ 352 (358)
..++++.- +.|...+... . .+..+. ......+.|+++|++ .+|+.....|.|..+|+++
T Consensus 150 -aYVt~s~~~~~I~rV~pdG-~-~~~~~~~~~~~~~~~~G~nGIv~~pdg-~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 150 -SYVAFALGMPAIARVSADG-K-TVSTFAWESGNGGQRPGYSGITFDPHS-NKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp -EEEEEEESSCEEEEECTTS-C-CEEEEEECCCCSSSCCSCSEEEEETTT-TEEEEESSSSSEEEEECSS
T ss_pred -EEEeCCCCCCeEEEEeCCC-C-EEeeeeecCCCcccccCcceEEEeCCC-CEEEEEcCCCeEEEEcCCC
Confidence 88888888 8877776653 2 222221 112236799999999 6666655599999999884
No 244
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.33 E-value=0.0079 Score=53.52 Aligned_cols=152 Identities=11% Similarity=-0.004 Sum_probs=91.3
Q ss_pred CCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCe
Q 018322 165 QGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGR 244 (358)
Q Consensus 165 ~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~ 244 (358)
...+.++.+.+++ .+.+ ++ +.|..|| .. ...+..+......+.++...+++ .
T Consensus 176 ~~~~~~~~~d~~g-~l~v-~t--~~l~~~d-~~---------------------g~~~~~~~~~~~~~~~~~~~~~g--~ 227 (330)
T 3hxj_A 176 DAITSAASIGKDG-TIYF-GS--DKVYAIN-PD---------------------GTEKWNFYAGYWTVTRPAISEDG--T 227 (330)
T ss_dssp SCCCSCCEECTTC-CEEE-ES--SSEEEEC-TT---------------------SCEEEEECCSSCCCSCCEECTTS--C
T ss_pred CCceeeeEEcCCC-EEEE-Ee--CEEEEEC-CC---------------------CcEEEEEccCCcceeceEECCCC--e
Confidence 4456666666666 3443 34 7888888 33 23333343344567777777765 5
Q ss_pred EEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEecCCCCeE
Q 018322 245 LVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVN 324 (358)
Q Consensus 245 l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~ 324 (358)
|..++.++.|..++... .. . ..+......+..+.+.+++. +..++.+|.|..+|. ++ ..+..+......+.
T Consensus 228 l~v~t~~~gl~~~~~~g-~~-~---~~~~~~~~~~~~~~~~~~g~--l~v~t~~ggl~~~d~-~g-~~~~~~~~~~~~~~ 298 (330)
T 3hxj_A 228 IYVTSLDGHLYAINPDG-TE-K---WRFKTGKRIESSPVIGNTDT--IYFGSYDGHLYAINP-DG-TEKWNFETGSWIIA 298 (330)
T ss_dssp EEEEETTTEEEEECTTS-CE-E---EEEECSSCCCSCCEECTTSC--EEEECTTCEEEEECT-TS-CEEEEEECSSCCCS
T ss_pred EEEEcCCCeEEEECCCC-CE-e---EEeeCCCCccccceEcCCCe--EEEecCCCCEEEECC-CC-cEEEEEEcCCcccc
Confidence 67777788888887532 21 1 12222223334455565664 667888889999995 43 44555555556677
Q ss_pred EEEEeCCCCcEEEEEeCCCCEEEEeCCCCCC
Q 018322 325 VISWNRLASCLLASGSDDGTFSIHDLRLLKV 355 (358)
Q Consensus 325 ~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~~ 355 (358)
++...+++ . |..|+.+|.+++......+.
T Consensus 299 ~~~~d~~g-~-l~~gt~~G~~~~~~~~~~~~ 327 (330)
T 3hxj_A 299 TPVIDENG-T-IYFGTRNGKFYALFNLEHHH 327 (330)
T ss_dssp CCEECTTC-C-EEEECTTSCEEEEEC-----
T ss_pred ceEEcCCC-E-EEEEcCCCeEEEEecccccc
Confidence 77887777 4 55578899999988765443
No 245
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.33 E-value=0.0069 Score=57.05 Aligned_cols=156 Identities=8% Similarity=0.075 Sum_probs=92.3
Q ss_pred ceeEEEEcCC-CCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCeE
Q 018322 167 CVNRIRAMTQ-NPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRL 245 (358)
Q Consensus 167 ~V~~i~~~p~-~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~l 245 (358)
....|+++|. +..++++-.. +.|+.+|+.. ..+..+.........|+|++++. +|
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~-~~I~~id~~~----------------------~~v~~~~~~~~~P~~ia~d~~G~-~l 193 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQ-HPTRLIDFEK----------------------EYVSTVYSGLSKVRTICWTHEAD-SM 193 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBT-EEEEEEETTT----------------------TEEEEEECCCSCEEEEEECTTSS-EE
T ss_pred CCCEEEECCCCCCeEEEEeCC-CcEEEEECCC----------------------CEEEEEecCCCCcceEEEeCCCC-EE
Confidence 3466778873 3244444333 7788888765 22233333445688999999987 66
Q ss_pred EEEeCC-C----cEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEe-cC
Q 018322 246 VTGDCN-S----CIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFK-AH 319 (358)
Q Consensus 246 ~sgs~d-g----~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~-~h 319 (358)
+.++.. + .+.+.+. . +.+.. ...+. .......++++|....++++-...+.|..++...+. ...... ..
T Consensus 194 yvad~~~~~~~~~v~~~~~-~-g~~~~-~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~-~~~~~~~~~ 268 (430)
T 3tc9_A 194 IITNDQNNNDRPNNYILTR-E-SGFKV-ITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQE-TTPLFTIQD 268 (430)
T ss_dssp EEEECCSCTTSEEEEEEEG-G-GTSCS-EEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTE-EEEEEECSS
T ss_pred EEEeCCCCcccceEEEEeC-C-Cceee-eeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCc-EEEEEEcCC
Confidence 666542 2 2333333 2 22110 01111 123456788999444388777788999999987632 211111 12
Q ss_pred CCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCC
Q 018322 320 NADVNVISWNRLASCLLASGSDDGTFSIHDLR 351 (358)
Q Consensus 320 ~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr 351 (358)
....+.|+|+|++..++++-...+.|..++..
T Consensus 269 ~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 269 SGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp SSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred CCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 23568899999993366666677889998764
No 246
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.32 E-value=0.0065 Score=61.52 Aligned_cols=159 Identities=9% Similarity=0.055 Sum_probs=90.5
Q ss_pred ceeEEEEc-CCCCcEEEEEeCCC----cEEEEeCCCC-ccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCC
Q 018322 167 CVNRIRAM-TQNPHICASWADTG----HVQVWDLRSH-LNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPI 240 (358)
Q Consensus 167 ~V~~i~~~-p~~~~~lat~s~dg----~V~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~ 240 (358)
.+...+|+ |++..++.+.+..| +|+++|+... .. + ... +.. ...++.|+|+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~-l----------------~~~---~~~---~~~~~~WspD 231 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT-I----------------ADK---VSG---TNGEIVWGPD 231 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC-C----------------CCC---EEE---ECSCCEECSS
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe-C----------------Ccc---ccC---ceeeEEEecC
Confidence 67889999 99954444444443 4999999762 10 0 011 111 1246889999
Q ss_pred CCCeEEEEeCC-----CcEEEEecCCCCCcccCCCccc-cCCCcEEEEEECCCCCCEEEEEEC--CCcEEEEECCCCCCe
Q 018322 241 TTGRLVTGDCN-----SCIYLWEPASDATWNVDPNPFI-GHSASVEDLQWSPTEPDVFASCSV--DGHIAIWDTRVGKSA 312 (358)
Q Consensus 241 ~~~~l~sgs~d-----g~I~lwd~~~~~~~~~~~~~~~-~h~~~V~~v~~sp~~~~~las~s~--Dg~I~iwD~r~~~~~ 312 (358)
+. .|+....+ ..|+++++.++.... ...+. ........+.|+|+++.++++... ...|.++|+..+...
T Consensus 232 g~-~l~y~~~d~~~~~~~v~~~~lgt~~~~~--~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~ 308 (751)
T 2xe4_A 232 HT-SLFYVTKDETLRENKVWRHVMGKLQSED--VCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAH 308 (751)
T ss_dssp TT-EEEEEEECTTCCEEEEEEEETTSCGGGC--EEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTC
T ss_pred CC-EEEEEEECCCCCCCEEEEEECCCCchhc--EEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCC
Confidence 98 55444443 257778875532111 01111 222346688999999955555433 346888898764222
Q ss_pred e--EEE-ecCCCCeEEEEEeCCCCcEEEEEeCC----CCEEEEeCCC
Q 018322 313 L--TSF-KAHNADVNVISWNRLASCLLASGSDD----GTFSIHDLRL 352 (358)
Q Consensus 313 ~--~~~-~~h~~~V~~i~~~p~~~~~lasgs~D----g~i~iwDlr~ 352 (358)
. ..+ ........++.|+..+ .+++....+ ..|..+|+.+
T Consensus 309 ~~~~~l~~~~~~~~~s~~~~~g~-~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 309 NTLEIVRPREKGVRYDVQMHGTS-HLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp CCEEESSCCCTTCCEEEEEETTT-EEEEEECTTTCTTCEEEEEETTS
T ss_pred ceeEEeecCCCCceEEEeeeeCC-EEEEEeCCCCCCCcEEEEEcCCC
Confidence 2 333 2334455667766555 666665554 3566677754
No 247
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.32 E-value=0.011 Score=52.58 Aligned_cols=148 Identities=12% Similarity=0.045 Sum_probs=89.1
Q ss_pred CCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCC
Q 018322 164 HQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTG 243 (358)
Q Consensus 164 H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~ 243 (358)
+...+.++...+++ . +..++.++.|..||... ..+..+......+.++...+++
T Consensus 135 ~~~~~~~~~~~~~g-~-l~vgt~~~~l~~~d~~g----------------------~~~~~~~~~~~~~~~~~~d~~g-- 188 (330)
T 3hxj_A 135 KKAIYATPIVSEDG-T-IYVGSNDNYLYAINPDG----------------------TEKWRFKTNDAITSAASIGKDG-- 188 (330)
T ss_dssp SSCCCSCCEECTTS-C-EEEECTTSEEEEECTTS----------------------CEEEEEECSSCCCSCCEECTTC--
T ss_pred CCceeeeeEEcCCC-E-EEEEcCCCEEEEECCCC----------------------CEeEEEecCCCceeeeEEcCCC--
Confidence 44455666666666 3 55567778899998762 1222232333445566666655
Q ss_pred eEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEecCCCCe
Q 018322 244 RLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADV 323 (358)
Q Consensus 244 ~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V 323 (358)
.|..|+ +.|..+| .++.. . ..+......+.++...+++. +..++.++.|..+|. .+ ..+..+......+
T Consensus 189 ~l~v~t--~~l~~~d-~~g~~-~---~~~~~~~~~~~~~~~~~~g~--l~v~t~~~gl~~~~~-~g-~~~~~~~~~~~~~ 257 (330)
T 3hxj_A 189 TIYFGS--DKVYAIN-PDGTE-K---WNFYAGYWTVTRPAISEDGT--IYVTSLDGHLYAINP-DG-TEKWRFKTGKRIE 257 (330)
T ss_dssp CEEEES--SSEEEEC-TTSCE-E---EEECCSSCCCSCCEECTTSC--EEEEETTTEEEEECT-TS-CEEEEEECSSCCC
T ss_pred EEEEEe--CEEEEEC-CCCcE-E---EEEccCCcceeceEECCCCe--EEEEcCCCeEEEECC-CC-CEeEEeeCCCCcc
Confidence 455555 8899999 44222 1 12222335577788888875 555677888888874 32 3455555444445
Q ss_pred EEEEEeCCCCcEEEEEeCCCCEEEEeC
Q 018322 324 NVISWNRLASCLLASGSDDGTFSIHDL 350 (358)
Q Consensus 324 ~~i~~~p~~~~~lasgs~Dg~i~iwDl 350 (358)
..+.+.+++ .|..++.+|.|..+|.
T Consensus 258 ~~~~~~~~g--~l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 258 SSPVIGNTD--TIYFGSYDGHLYAINP 282 (330)
T ss_dssp SCCEECTTS--CEEEECTTCEEEEECT
T ss_pred ccceEcCCC--eEEEecCCCCEEEECC
Confidence 556666555 4556777888988885
No 248
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.31 E-value=0.011 Score=57.51 Aligned_cols=74 Identities=8% Similarity=0.005 Sum_probs=57.0
Q ss_pred cEEEEEECCCCCCEEEEEECCCcEEEEECCCCC----------CeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEE
Q 018322 278 SVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGK----------SALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSI 347 (358)
Q Consensus 278 ~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~----------~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~i 347 (358)
...++.++|+|.++++++..+.+|.++|+.+.. ..+.....-......++|+|+| +..++.-.|++|.+
T Consensus 278 ~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG-~aY~t~~ldsqV~k 356 (595)
T 1fwx_A 278 NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRG-NAYTSLFLDSQVVK 356 (595)
T ss_dssp SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTS-EEEEEETTTTEEEE
T ss_pred CceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCC-eEEEEEecCCcEEE
Confidence 456789999999888888889999999998531 0122222234567889999999 88888889999999
Q ss_pred EeCCC
Q 018322 348 HDLRL 352 (358)
Q Consensus 348 wDlr~ 352 (358)
||+.+
T Consensus 357 wdi~~ 361 (595)
T 1fwx_A 357 WNIED 361 (595)
T ss_dssp EEHHH
T ss_pred EEhhH
Confidence 99865
No 249
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.25 E-value=0.012 Score=50.61 Aligned_cols=161 Identities=17% Similarity=0.088 Sum_probs=98.3
Q ss_pred EEEEecCCCc--eeEEEEcCCCCcEEEEEeCCC--cEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCC-Ce
Q 018322 158 QLRKVAHQGC--VNRIRAMTQNPHICASWADTG--HVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKD-EG 232 (358)
Q Consensus 158 ~~~~~~H~~~--V~~i~~~p~~~~~lat~s~dg--~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~v 232 (358)
..+..+|... ...+.|.+ + .++.+.+..| .|+.+|+.+ .+.+..+.-... -.
T Consensus 11 v~~~~phd~~~ftqGL~~~~-~-~LyestG~~g~S~v~~vD~~t---------------------gkv~~~~~l~~~~fg 67 (243)
T 3mbr_X 11 VVKRYPHDTTAFTEGLFYLR-G-HLYESTGETGRSSVRKVDLET---------------------GRILQRAEVPPPYFG 67 (243)
T ss_dssp EEEEEECCTTCCEEEEEEET-T-EEEEEECCTTSCEEEEEETTT---------------------CCEEEEEECCTTCCE
T ss_pred EEEEcCCCCccccccEEEEC-C-EEEEECCCCCCceEEEEECCC---------------------CCEEEEEeCCCCcce
Confidence 3556688754 55899987 4 6777777764 899999987 344444432221 22
Q ss_pred EEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCe
Q 018322 233 YAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSA 312 (358)
Q Consensus 233 ~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~ 312 (358)
.+++.. +..+++..-.++.+.+||..+.... ..+..- ..-..++ +++..+++|- .++.|.++|..+. ..
T Consensus 68 eGi~~~--~~~ly~ltw~~~~v~v~D~~tl~~~----~ti~~~-~~Gwglt--~dg~~L~vSd-gs~~l~~iDp~t~-~~ 136 (243)
T 3mbr_X 68 AGIVAW--RDRLIQLTWRNHEGFVYDLATLTPR----ARFRYP-GEGWALT--SDDSHLYMSD-GTAVIRKLDPDTL-QQ 136 (243)
T ss_dssp EEEEEE--TTEEEEEESSSSEEEEEETTTTEEE----EEEECS-SCCCEEE--ECSSCEEEEC-SSSEEEEECTTTC-CE
T ss_pred eEEEEe--CCEEEEEEeeCCEEEEEECCcCcEE----EEEeCC-CCceEEe--eCCCEEEEEC-CCCeEEEEeCCCC-eE
Confidence 334443 3314444456889999999774321 222211 1123444 4555466665 4889999999884 34
Q ss_pred eEEEec--CC---CCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 313 LTSFKA--HN---ADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 313 ~~~~~~--h~---~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
+.++.. +. ..+|.+.|. ++ .+++..-.+..|.+.|.++++
T Consensus 137 ~~~I~V~~~g~~~~~lNeLe~~-~G-~lyanvw~s~~I~vIDp~tG~ 181 (243)
T 3mbr_X 137 VGSIKVTAGGRPLDNLNELEWV-NG-ELLANVWLTSRIARIDPASGK 181 (243)
T ss_dssp EEEEECEETTEECCCEEEEEEE-TT-EEEEEETTTTEEEEECTTTCB
T ss_pred EEEEEEccCCcccccceeeEEe-CC-EEEEEECCCCeEEEEECCCCC
Confidence 444432 22 346778877 56 666666567789999988875
No 250
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.25 E-value=0.0048 Score=61.71 Aligned_cols=54 Identities=19% Similarity=0.202 Sum_probs=40.2
Q ss_pred CcEEEEECCCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCCC
Q 018322 299 GHIAIWDTRVGKSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKV 355 (358)
Q Consensus 299 g~I~iwD~r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~~ 355 (358)
|.|..||+.++ +.+.++. +...++...+...+ .+++.|+.||.+++||+++++.
T Consensus 457 g~l~A~D~~tG-~~~W~~~-~~~~~~~g~~~~~g-~~v~~g~~dg~l~a~D~~tG~~ 510 (677)
T 1kb0_A 457 GRLLAWDPVAQ-KAAWSVE-HVSPWNGGTLTTAG-NVVFQGTADGRLVAYHAATGEK 510 (677)
T ss_dssp EEEEEEETTTT-EEEEEEE-ESSSCCCCEEEETT-TEEEEECTTSEEEEEETTTCCE
T ss_pred cEEEEEeCCCC-cEEeecC-CCCCCcCcceEeCC-CEEEEECCCCcEEEEECCCCce
Confidence 78999999985 4555554 33345555566666 6788889999999999998764
No 251
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.18 E-value=0.01 Score=59.49 Aligned_cols=55 Identities=18% Similarity=0.117 Sum_probs=40.6
Q ss_pred CCcEEEEECCCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCCC
Q 018322 298 DGHIAIWDTRVGKSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKV 355 (358)
Q Consensus 298 Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~~ 355 (358)
+|.|+.||+.++ +.+.++..+. .+....+...+ .+++.|+.||.|+.||.++++.
T Consensus 454 ~g~l~A~D~~tG-~~~W~~~~~~-~~~~g~~~tag-glvf~gt~dg~l~a~D~~tG~~ 508 (689)
T 1yiq_A 454 SGKLIAWDPVKQ-QAAWEVPYVT-IFNGGTLSTAG-NLVFEGSADGRVIAYAADTGEK 508 (689)
T ss_dssp EEEEEEEETTTT-EEEEEEEESS-SCCCCEEEETT-TEEEEECTTSEEEEEETTTCCE
T ss_pred ceeEEEEECCCC-CeEeEccCCC-CccCccceECC-CEEEEECCCCcEEEEECCCCcc
Confidence 378999999986 4566655443 33334555566 6889999999999999998864
No 252
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.13 E-value=0.11 Score=48.15 Aligned_cols=170 Identities=10% Similarity=-0.070 Sum_probs=103.4
Q ss_pred ecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCC
Q 018322 162 VAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPIT 241 (358)
Q Consensus 162 ~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~ 241 (358)
+.....+..|.|.+.+..++.+-...+.|+.+++..... .......+........+|++.+.+
T Consensus 108 ~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~-----------------~~~~~~~~~~~~~~p~glavD~~~ 170 (400)
T 3p5b_L 108 IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG-----------------VSSYDTVISRDIQAPDGLAVDWIH 170 (400)
T ss_dssp ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----------------------CCCEEEECSSCSCEEEEEEETTT
T ss_pred ccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCC-----------------CCcceEEEeCCCCCcccEEEEecC
Confidence 445678889999987656777766778888888764110 011222233233456677777655
Q ss_pred CCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEEC-CCcEEEEECCCCCCeeEEEecCC
Q 018322 242 TGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSV-DGHIAIWDTRVGKSALTSFKAHN 320 (358)
Q Consensus 242 ~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~-Dg~I~iwD~r~~~~~~~~~~~h~ 320 (358)
..++++-...+.|.+.++..... . ..+.........|+++|.+..++.+-.. .+.|...++... .....+...-
T Consensus 171 ~~lY~~d~~~~~I~~~~~~g~~~-~---~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~-~~~~~~~~~l 245 (400)
T 3p5b_L 171 SNIYWTDSVLGTVSVADTKGVKR-K---TLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENI 245 (400)
T ss_dssp TEEEEEETTTTEEEEECTTTCSE-E---EEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSC-SCEEEECSSC
T ss_pred CceEEEECCCCeEEEEeCCCCce-E---EEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCC-ccEEEEECCC
Confidence 42555555678899988864221 1 1122233457899999977646665533 478888888652 2222223333
Q ss_pred CCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCC
Q 018322 321 ADVNVISWNRLASCLLASGSDDGTFSIHDLRLL 353 (358)
Q Consensus 321 ~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~ 353 (358)
...+.|++.+.+..++++=...+.|..+|+...
T Consensus 246 ~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (400)
T 3p5b_L 246 QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 278 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CceEEEEEEeCCCEEEEEECCCCEEEEEeCCCC
Confidence 567999999877456565556778999888643
No 253
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.07 E-value=0.0015 Score=60.27 Aligned_cols=138 Identities=8% Similarity=-0.126 Sum_probs=85.9
Q ss_pred cEEEEEeCCC----cEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCeEEEEe-----
Q 018322 179 HICASWADTG----HVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGD----- 249 (358)
Q Consensus 179 ~~lat~s~dg----~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~l~sgs----- 249 (358)
.++++-..++ +|.++|..+ .+.+..+..-..+ .+.++|++. +++++.
T Consensus 33 ~~yV~~~~~~~~~d~vsvID~~t---------------------~~v~~~i~vG~~P--~i~~spDg~-~lyVan~~~~r 88 (368)
T 1mda_H 33 RSHITLPAYFAGTTENWVSCAGC---------------------GVTLGHSLGAFLS--LAVAGHSGS-DFALASTSFAR 88 (368)
T ss_dssp EEEEEECTTTCSSEEEEEEETTT---------------------TEEEEEEEECTTC--EEEECTTSS-CEEEEEEEETT
T ss_pred eEEEECCccCCccceEEEEECCC---------------------CeEEEEEeCCCCC--ceEECCCCC-EEEEEcccccc
Confidence 3445444444 788999877 4555555443345 799999998 777765
Q ss_pred -----CCCcEEEEecCCCCCcccCCCccccC-------CCcEEEEEECCCCCCEEEEEEC-CCcEEE--EECCCCCCeeE
Q 018322 250 -----CNSCIYLWEPASDATWNVDPNPFIGH-------SASVEDLQWSPTEPDVFASCSV-DGHIAI--WDTRVGKSALT 314 (358)
Q Consensus 250 -----~dg~I~lwd~~~~~~~~~~~~~~~~h-------~~~V~~v~~sp~~~~~las~s~-Dg~I~i--wD~r~~~~~~~ 314 (358)
.++.|.+||+.+... . ..+... ......++++|+++.++++... ...|.+ +|+.+ +.
T Consensus 89 ~~~G~~~~~VsviD~~T~~v-v---~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t----v~ 160 (368)
T 1mda_H 89 SAKGKRTDYVEVFDPVTFLP-I---ADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD----DQ 160 (368)
T ss_dssp TTSSSEEEEEEEECTTTCCE-E---EEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE----EE
T ss_pred cccCCCCCEEEEEECCCCCE-E---EEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh----ce
Confidence 368999999987432 2 222111 1234568999999955554433 467888 88876 33
Q ss_pred EEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCC
Q 018322 315 SFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRL 352 (358)
Q Consensus 315 ~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~ 352 (358)
.+..- .. +.+.|++...+++.+.||.+.+.|+.+
T Consensus 161 ~i~v~-~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~ 194 (368)
T 1mda_H 161 LTKSA-SC---FHIHPGAAATHYLGSCPASLAASDLAA 194 (368)
T ss_dssp EEECS-SC---CCCEEEETTEEECCCCTTSCEEEECCS
T ss_pred EEECC-Cc---eEEccCCCeEEEEEcCCCCEEEEECcc
Confidence 33211 11 123455556666777788888888765
No 254
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.06 E-value=0.14 Score=46.50 Aligned_cols=164 Identities=13% Similarity=0.123 Sum_probs=97.7
Q ss_pred CceeEEEEcCCC----C---cEEEEEeC--CCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEc-------CCC
Q 018322 166 GCVNRIRAMTQN----P---HICASWAD--TGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG-------GHK 229 (358)
Q Consensus 166 ~~V~~i~~~p~~----~---~~lat~s~--dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~h~ 229 (358)
+.+|.+..-|.- . ..+|+... +.+|++|++.... .++..+. .-.
T Consensus 68 g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~--------------------~~l~~i~~~~~pv~t~~ 127 (355)
T 3amr_A 68 GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKN--------------------GTLQSMTDPDHPIATAI 127 (355)
T ss_dssp SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTT--------------------CCEEECSCTTSCEECCC
T ss_pred CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCC--------------------CceeeccccccCcCCCC
Confidence 678888777631 0 12444444 5789999885321 1122221 111
Q ss_pred CCeEEEEe--CCCC-CCeEEEEeCCCcEEEEecCCC--C-CcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEE
Q 018322 230 DEGYAIDW--NPIT-TGRLVTGDCNSCIYLWEPASD--A-TWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAI 303 (358)
Q Consensus 230 ~~v~~l~~--s~~~-~~~l~sgs~dg~I~lwd~~~~--~-~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~i 303 (358)
..++.|+. ++.. ..++++...+|.+..|++... + ......+.|. -.+.+..+...+... .|..+-.+.-|..
T Consensus 128 ~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~-lgsq~EgcvvDd~~g-~Lyv~eEd~GIw~ 205 (355)
T 3amr_A 128 NEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK-MNSQTEGMAADDEYG-RLYIAEEDEAIWK 205 (355)
T ss_dssp SSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE-CSSCEEEEEEETTTT-EEEEEETTTEEEE
T ss_pred CCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec-CCCCcceEEEcCCCC-eEEEecccceEEE
Confidence 46777777 7753 326778888899999998532 1 1111123333 246788888888777 7888888877777
Q ss_pred EECCCC----CCeeEEEe-cC-CCCeEEEEEe--CCCC-cEEEEEeCCCCEEEEeCC
Q 018322 304 WDTRVG----KSALTSFK-AH-NADVNVISWN--RLAS-CLLASGSDDGTFSIHDLR 351 (358)
Q Consensus 304 wD~r~~----~~~~~~~~-~h-~~~V~~i~~~--p~~~-~~lasgs~Dg~i~iwDlr 351 (358)
++.+.. ...+..+. .+ ...+..|++- +++. .+|+|+-.+.++.+||.+
T Consensus 206 ~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 206 FSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred EeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 775421 11332221 22 2478888884 4443 466666567899999986
No 255
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.03 E-value=0.022 Score=50.91 Aligned_cols=114 Identities=10% Similarity=-0.011 Sum_probs=70.4
Q ss_pred eEEEEeCCCCCCeEEEE-eCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEEC----------CCc
Q 018322 232 GYAIDWNPITTGRLVTG-DCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSV----------DGH 300 (358)
Q Consensus 232 v~~l~~s~~~~~~l~sg-s~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~----------Dg~ 300 (358)
...|+|++++. +|+.+ ...+.|..|++....... ...+....+ ...+++.+++. ++++... .+.
T Consensus 187 p~gia~~~dg~-~lyv~d~~~~~I~~~~~~~~~~~~--~~~~~~~~g-P~gi~~d~~G~-l~va~~~~~~~~~~~~~~~~ 261 (322)
T 2fp8_A 187 PGGAEVSADSS-FVLVAEFLSHQIVKYWLEGPKKGT--AEVLVKIPN-PGNIKRNADGH-FWVSSSEELDGNMHGRVDPK 261 (322)
T ss_dssp CCEEEECTTSS-EEEEEEGGGTEEEEEESSSTTTTC--EEEEEECSS-EEEEEECTTSC-EEEEEEEETTSSTTSCEEEE
T ss_pred CcceEECCCCC-EEEEEeCCCCeEEEEECCCCcCCc--cceEEeCCC-CCCeEECCCCC-EEEEecCcccccccCCCccE
Confidence 45799999987 66555 456899999986421100 011111123 77899999997 7776654 467
Q ss_pred EEEEECCCCCCeeEEEecC----CCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 301 IAIWDTRVGKSALTSFKAH----NADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 301 I~iwD~r~~~~~~~~~~~h----~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
|..+|.. + ..+..+... -..+..+++. ++ .++++....+.|.++++....
T Consensus 262 v~~~d~~-G-~~~~~~~~~~g~~~~~~~~~~~~-~g-~L~v~~~~~~~i~~~~~~~~~ 315 (322)
T 2fp8_A 262 GIKFDEF-G-NILEVIPLPPPFAGEHFEQIQEH-DG-LLYIGTLFHGSVGILVYDKKG 315 (322)
T ss_dssp EEEECTT-S-CEEEEEECCTTTTTSCCCEEEEE-TT-EEEEECSSCSEEEEEEC----
T ss_pred EEEECCC-C-CEEEEEECCCCCccccceEEEEe-CC-EEEEeecCCCceEEEeccccc
Confidence 8888864 2 344445332 2346667773 55 677777778899999987544
No 256
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.96 E-value=0.028 Score=53.66 Aligned_cols=160 Identities=13% Similarity=0.106 Sum_probs=97.0
Q ss_pred ceeEEEEcCC-CCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcC----CCCCeEEEEe----
Q 018322 167 CVNRIRAMTQ-NPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGG----HKDEGYAIDW---- 237 (358)
Q Consensus 167 ~V~~i~~~p~-~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----h~~~v~~l~~---- 237 (358)
....|+|.|. +.+++++....+.|++.|+.. ..+..+.. .......|+|
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~----------------------~~v~~l~~~~~~~~~~p~~ia~~~~~ 197 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKN----------------------RMLSSPLNINTIPTNRIRSIAFNKKI 197 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTT----------------------TEEEEEECCTTSSCSBEEEEEECCCB
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCC----------------------CEEEEEEccCccccCCCcEEEEeecc
Confidence 3568889984 446777766667788888776 22222221 1235789999
Q ss_pred ---CCCCCCeEEEEeCCC-------cEEEEecCCCCCccc-C-CCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEE
Q 018322 238 ---NPITTGRLVTGDCNS-------CIYLWEPASDATWNV-D-PNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWD 305 (358)
Q Consensus 238 ---s~~~~~~l~sgs~dg-------~I~lwd~~~~~~~~~-~-~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD 305 (358)
++++. .|++++..+ .|.+.+....+.+.. . ...+.. ......++.+|.+..++++....+.|..+|
T Consensus 198 ~~~d~~G~-~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d 275 (496)
T 3kya_A 198 EGYADEAE-YMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLD 275 (496)
T ss_dssp TTTBCTTC-EEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEEC
T ss_pred cccCCCCC-EEEEEeCCCCCcccCceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEe
Confidence 99987 666666544 266665333223220 0 011111 124467789997666888888899999999
Q ss_pred CC-------CCCC-----e-----eEE-E-ecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeC
Q 018322 306 TR-------VGKS-----A-----LTS-F-KAHNADVNVISWNRLASCLLASGSDDGTFSIHDL 350 (358)
Q Consensus 306 ~r-------~~~~-----~-----~~~-~-~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDl 350 (358)
+. ++.. + ... + .........|+|+|++..++++-.....|+.++.
T Consensus 276 ~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 276 LVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp HHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred cccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEec
Confidence 87 4321 0 111 1 1223446889999999335555566778888654
No 257
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.94 E-value=0.095 Score=53.16 Aligned_cols=169 Identities=10% Similarity=-0.075 Sum_probs=98.7
Q ss_pred cCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCC
Q 018322 163 AHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITT 242 (358)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~ 242 (358)
.....+..|.|.+....++.+-...+.|+.+++..... .......+........+|++.+.+.
T Consensus 421 ~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~-----------------~~~~~~vi~~~l~~P~GLAvD~~~~ 483 (791)
T 3m0c_C 421 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG-----------------VSSYDTVISRDIQAPDGLAVDWIHS 483 (791)
T ss_dssp CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC-------------------------CEEEECSSCSCCCEEEEETTTT
T ss_pred cCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCC-----------------CcceeEEEecCCCCcceeeeeecCC
Confidence 34456677888775546666666667788777764110 0112223332233445666665654
Q ss_pred CeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECC-CcEEEEECCCCCCeeEEEecCCC
Q 018322 243 GRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVD-GHIAIWDTRVGKSALTSFKAHNA 321 (358)
Q Consensus 243 ~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~D-g~I~iwD~r~~~~~~~~~~~h~~ 321 (358)
.++++-...+.|.+.++..... . ..+.........|+++|.+..++.+-... +.|...++... .....+...-.
T Consensus 484 ~LY~tD~~~~~I~v~~ldG~~~-~---~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~-~~~~lv~~~l~ 558 (791)
T 3m0c_C 484 NIYWTDSVLGTVSVADTKGVKR-K---TLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENIQ 558 (791)
T ss_dssp EEEEEETTTTEEEEEETTSSSE-E---EEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEEEEECSSCS
T ss_pred cEEEEecCCCeEEEEeCCCCeE-E---EEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCC-ceEEEEeCCCC
Confidence 3555656678999999864221 1 11222334588999999866466665443 78888888642 22222333345
Q ss_pred CeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCC
Q 018322 322 DVNVISWNRLASCLLASGSDDGTFSIHDLRLL 353 (358)
Q Consensus 322 ~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~ 353 (358)
..+.|++.+.+..++++=...+.|..+++...
T Consensus 559 ~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~ 590 (791)
T 3m0c_C 559 WPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 590 (791)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CceEEEEecCCCeEEEEeCCCCcEEEEecCCC
Confidence 68999999877455555555678888887543
No 258
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.93 E-value=0.11 Score=45.86 Aligned_cols=163 Identities=9% Similarity=0.031 Sum_probs=94.7
Q ss_pred EEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeC
Q 018322 159 LRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWN 238 (358)
Q Consensus 159 ~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 238 (358)
...++.......+.|.+++ .++++-...+.|+.||.... ....+. -.....+|++.
T Consensus 25 ~~~~p~~~~pegia~~~~g-~lyv~d~~~~~I~~~d~~g~----------------------~~~~~~-~~~~p~gia~~ 80 (306)
T 2p4o_A 25 ITSFPVNTFLENLASAPDG-TIFVTNHEVGEIVSITPDGN----------------------QQIHAT-VEGKVSGLAFT 80 (306)
T ss_dssp EEEECTTCCEEEEEECTTS-CEEEEETTTTEEEEECTTCC----------------------EEEEEE-CSSEEEEEEEC
T ss_pred eEeCCCCCCcceEEECCCC-CEEEEeCCCCeEEEECCCCc----------------------eEEEEe-CCCCceeEEEc
Confidence 3444444678899999988 67777778899999987651 111111 12367899999
Q ss_pred CCCCCeEEEEeCC-C-cEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEE
Q 018322 239 PITTGRLVTGDCN-S-CIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSF 316 (358)
Q Consensus 239 ~~~~~~l~sgs~d-g-~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~ 316 (358)
+++. ++++.... + .|..++..++ .... .... ........++..+.+. ++++....+.|..+|...+...+...
T Consensus 81 ~dG~-l~vad~~~~~~~v~~~d~~~g-~~~~-~~~~-~~~~~~~g~~~~~~~~-~~v~d~~~g~i~~~d~~~~~~~v~~~ 155 (306)
T 2p4o_A 81 SNGD-LVATGWNADSIPVVSLVKSDG-TVET-LLTL-PDAIFLNGITPLSDTQ-YLTADSYRGAIWLIDVVQPSGSIWLE 155 (306)
T ss_dssp TTSC-EEEEEECTTSCEEEEEECTTS-CEEE-EEEC-TTCSCEEEEEESSSSE-EEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred CCCc-EEEEeccCCcceEEEEcCCCC-eEEE-EEeC-CCccccCcccccCCCc-EEEEECCCCeEEEEeCCCCcEeEEEE
Confidence 9986 55554332 2 4666665542 2210 0011 1122334555555443 56655568899999986531112111
Q ss_pred e---------cCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCC
Q 018322 317 K---------AHNADVNVISWNRLASCLLASGSDDGTFSIHDLRL 352 (358)
Q Consensus 317 ~---------~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~ 352 (358)
. ..-...+.| ++++..++++-...+.|..||+..
T Consensus 156 ~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~ 198 (306)
T 2p4o_A 156 HPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDS 198 (306)
T ss_dssp CGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCT
T ss_pred CCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCC
Confidence 0 111235666 777745666666788999999864
No 259
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.90 E-value=0.071 Score=47.83 Aligned_cols=162 Identities=7% Similarity=-0.119 Sum_probs=98.7
Q ss_pred CceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCeE
Q 018322 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRL 245 (358)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~l 245 (358)
..+..+.|.+.+..++.+-...+.|+.+++... ......+........+|++.+.+..++
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~--------------------~~~~~~~~~~l~~p~glavd~~~g~ly 94 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKT--------------------ESVQNVVVSGLLSPDGLACDWLGEKLY 94 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSS--------------------SCCCEEEEECCSCCCEEEEETTTTEEE
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCC--------------------CceEEEEcCCCCCccEEEEEcCCCeEE
Confidence 356788999866577777777788988888762 111112222222344666665444255
Q ss_pred EEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEE-CCCcEEEEECCCCCCeeEEEecCCCCeE
Q 018322 246 VTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCS-VDGHIAIWDTRVGKSALTSFKAHNADVN 324 (358)
Q Consensus 246 ~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s-~Dg~I~iwD~r~~~~~~~~~~~h~~~V~ 324 (358)
++-...+.|.++++....... .+.........|++.|.+..++.+-. ..+.|...++... .....+...-...+
T Consensus 95 ~~d~~~~~I~~~~~dG~~~~~----l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~~~~~~l~~Pn 169 (318)
T 3sov_A 95 WTDSETNRIEVSNLDGSLRKV----LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS-SRFIIINSEIYWPN 169 (318)
T ss_dssp EEETTTTEEEEEETTSCSCEE----EECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSC-SCEEEECSSCSCEE
T ss_pred EEECCCCEEEEEECCCCcEEE----EEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCC-CeEEEEECCCCCcc
Confidence 555567899999985422111 11123456789999997664555543 3578888887642 22222222334568
Q ss_pred EEEEeCCCCcEEEEEeCCCCEEEEeCCC
Q 018322 325 VISWNRLASCLLASGSDDGTFSIHDLRL 352 (358)
Q Consensus 325 ~i~~~p~~~~~lasgs~Dg~i~iwDlr~ 352 (358)
.|+|++++..++.+=+..+.|..+|+..
T Consensus 170 glavd~~~~~lY~aD~~~~~I~~~d~dG 197 (318)
T 3sov_A 170 GLTLDYEEQKLYWADAKLNFIHKSNLDG 197 (318)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEEEeccCCEEEEEECCCCEEEEEcCCC
Confidence 9999997646666666678899998863
No 260
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.90 E-value=0.045 Score=49.97 Aligned_cols=170 Identities=12% Similarity=0.040 Sum_probs=96.0
Q ss_pred EEEecC-CCceeEEEEcCCCCcEEEEE------------eCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEE
Q 018322 159 LRKVAH-QGCVNRIRAMTQNPHICASW------------ADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF 225 (358)
Q Consensus 159 ~~~~~H-~~~V~~i~~~p~~~~~lat~------------s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (358)
++.+.. ....-.|.+.|++ .+++++ ..+|.|.++|........ ..+ .+
T Consensus 42 C~~i~~~~~G~EDi~~~~~G-~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~-----------------~~l-~~ 102 (355)
T 3sre_A 42 CNLVKGIDNGSEDLEILPNG-LAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAV-----------------SEL-EI 102 (355)
T ss_dssp EEECTTCCSCCCEEEECTTS-EEEEEECCC-----------CCEEEEEETTSSSCCE-----------------EEC-EE
T ss_pred CEEeCCCCCCcceeEEcCCC-eEEEEeccccCCCcccCCCCCCeEEEEecCCCCCce-----------------EEE-Ec
Confidence 444443 3345667778876 444443 168999999987421110 111 12
Q ss_pred cC-----CCCCeEEEEeCC--CCCCeEEEEeC---CCcEEEEecCCCCCcccCCCccccC-CCcEEEEEECCCCCCEEEE
Q 018322 226 GG-----HKDEGYAIDWNP--ITTGRLVTGDC---NSCIYLWEPASDATWNVDPNPFIGH-SASVEDLQWSPTEPDVFAS 294 (358)
Q Consensus 226 ~~-----h~~~v~~l~~s~--~~~~~l~sgs~---dg~I~lwd~~~~~~~~~~~~~~~~h-~~~V~~v~~sp~~~~~las 294 (358)
.+ ..-....|++.+ ++..+|+++.. +.+|.+|++...+........+.+. -...+++.+.+++. ++++
T Consensus 103 ~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~-fyvt 181 (355)
T 3sre_A 103 IGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEH-FYAT 181 (355)
T ss_dssp ECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTE-EEEE
T ss_pred cCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCC-EEec
Confidence 22 122556777655 34335555532 4678888886543322222333332 24689999999987 6555
Q ss_pred EEC-----------------CCcEEEEECCCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCC
Q 018322 295 CSV-----------------DGHIAIWDTRVGKSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRL 352 (358)
Q Consensus 295 ~s~-----------------Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~ 352 (358)
... .|.|.-+|.. . +..+...-..-|.|+|+|++..++++-+..+.|..|++..
T Consensus 182 ~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~---~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 182 NDHYFIDPYLKSWEMHLGLAWSFVTYYSPN---D-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp ESCSCSSHHHHHHHHHTTCCCEEEEEECTT---C-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred CCcEeCCcccccchhhccCCccEEEEEECC---e-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 431 2445555542 1 2223223345799999999955566666678999999863
No 261
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.88 E-value=0.0053 Score=61.37 Aligned_cols=93 Identities=11% Similarity=0.139 Sum_probs=57.9
Q ss_pred CcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEecC-CCCeEEEEEeC
Q 018322 252 SCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAH-NADVNVISWNR 330 (358)
Q Consensus 252 g~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h-~~~V~~i~~~p 330 (358)
|.|..||+.++.. . ..+. +...+....+...+. +++.++.||.+++||.+++ +.+.++... .....-+.|..
T Consensus 457 g~l~A~D~~tG~~-~---W~~~-~~~~~~~g~~~~~g~-~v~~g~~dg~l~a~D~~tG-~~lw~~~~~~~~~~~p~~y~~ 529 (677)
T 1kb0_A 457 GRLLAWDPVAQKA-A---WSVE-HVSPWNGGTLTTAGN-VVFQGTADGRLVAYHAATG-EKLWEAPTGTGVVAAPSTYMV 529 (677)
T ss_dssp EEEEEEETTTTEE-E---EEEE-ESSSCCCCEEEETTT-EEEEECTTSEEEEEETTTC-CEEEEEECSSCCCSCCEEEEE
T ss_pred cEEEEEeCCCCcE-E---eecC-CCCCCcCcceEeCCC-EEEEECCCCcEEEEECCCC-ceeeeeeCCCCcccCCEEEEe
Confidence 6789999877432 1 1111 223334444555666 7777899999999999996 467777533 33334566777
Q ss_pred CCCcEEEEEeC----------------CCCEEEEeCC
Q 018322 331 LASCLLASGSD----------------DGTFSIHDLR 351 (358)
Q Consensus 331 ~~~~~lasgs~----------------Dg~i~iwDlr 351 (358)
+|..++++.+. .+.+.+|.+.
T Consensus 530 ~G~~~v~~~~G~~~~~~~~~~~~~~~~~~~l~~f~l~ 566 (677)
T 1kb0_A 530 DGRQYVSVAVGWGGVYGLAARATERQGPGTVYTFVVG 566 (677)
T ss_dssp TTEEEEEEEECCCHHHHHHCCSCSCCCCCEEEEEEET
T ss_pred CCEEEEEEeccCCccccccccccccCCCCeEEEEecc
Confidence 88455555333 3567777765
No 262
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.88 E-value=0.0077 Score=58.54 Aligned_cols=121 Identities=10% Similarity=0.031 Sum_probs=77.4
Q ss_pred CeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCc----cc----CCCccccCCCcEEEEEECCCCCCEEEEEECCCcEE
Q 018322 231 EGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATW----NV----DPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIA 302 (358)
Q Consensus 231 ~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~----~~----~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~ 302 (358)
...++.++|+|...++++-.+.+|.++|+.+.... .. ..... .-......++|+|+| +.+.+...|+.|.
T Consensus 278 ~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v-~vG~gP~h~aF~~dG-~aY~t~~ldsqV~ 355 (595)
T 1fwx_A 278 NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP-ELGLGPLHTAFDGRG-NAYTSLFLDSQVV 355 (595)
T ss_dssp SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC-BCCSCEEEEEECTTS-EEEEEETTTTEEE
T ss_pred CceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc-CCCCCcceEEECCCC-eEEEEEecCCcEE
Confidence 56689999999844555557889999999752100 00 00011 123457789999999 5888999999999
Q ss_pred EEECCCC---------CCeeEEEecCCCCe-E----EEEEeCCCCcEEEEEeC---CCCE----------EEEeCCCCC
Q 018322 303 IWDTRVG---------KSALTSFKAHNADV-N----VISWNRLASCLLASGSD---DGTF----------SIHDLRLLK 354 (358)
Q Consensus 303 iwD~r~~---------~~~~~~~~~h~~~V-~----~i~~~p~~~~~lasgs~---Dg~i----------~iwDlr~~~ 354 (358)
+||+... ...+.++..|-.+- + .+.++|+| .+|+++.. |+.+ .++|+...+
T Consensus 356 kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DG-k~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 356 KWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATN-DWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp EEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCS-SEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSS
T ss_pred EEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCC-CEEEEcCCCCccccccCCCCCCCcceEEEcCCCc
Confidence 9998651 23555665554421 1 12457999 66666542 3321 788885443
No 263
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.86 E-value=0.22 Score=45.85 Aligned_cols=159 Identities=9% Similarity=-0.087 Sum_probs=97.4
Q ss_pred CceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCeE
Q 018322 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRL 245 (358)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~l 245 (358)
.....+++.+.+..++.+-...+.|.+.++.. ......+........+|++.|.+. .|
T Consensus 159 ~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg---------------------~~~~~l~~~~l~~P~giavdp~~g-~l 216 (386)
T 3v65_B 159 ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDG---------------------AHRKVLLWQSLEKPRAIALHPMEG-TI 216 (386)
T ss_dssp SCCCCEEEETTTTEEEEEETTTTEEEECBTTS---------------------CSCEEEECSSCSCEEEEEEETTTT-EE
T ss_pred CCccEEEEEeCCCeEEEEcCCCCeEEEEeCCC---------------------CceEEeecCCCCCCcEEEEEcCCC-eE
Confidence 34567788776556777766677787777654 112222333334678899998765 55
Q ss_pred EEEe-CC-CcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEecCCCCe
Q 018322 246 VTGD-CN-SCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADV 323 (358)
Q Consensus 246 ~sgs-~d-g~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V 323 (358)
+... .. +.|..+++....... .....-...+.|+|+|.+..++++-+..+.|..+|+... .....+.......
T Consensus 217 y~td~~~~~~I~r~~~dG~~~~~----~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~-~~~~~~~~~~~~P 291 (386)
T 3v65_B 217 YWTDWGNTPRIEASSMDGSGRRI----IADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS-HRKAVISQGLPHP 291 (386)
T ss_dssp EEEECSSSCEEEEEETTSCSCEE----EECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSC-SCEEEECSSCSSE
T ss_pred EEeccCCCCEEEEEeCCCCCcEE----EEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCC-eeEEEEECCCCCc
Confidence 5444 34 678888775422111 111223457889999877757777777889999998653 2222233334456
Q ss_pred EEEEEeCCCCcEEEEEeCCCCEEEEeCCCC
Q 018322 324 NVISWNRLASCLLASGSDDGTFSIHDLRLL 353 (358)
Q Consensus 324 ~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~ 353 (358)
..|++. .+ .++.+-...+.|..+|..++
T Consensus 292 ~giav~-~~-~ly~td~~~~~V~~~~~~~G 319 (386)
T 3v65_B 292 FAITVF-ED-SLYWTDWHTKSINSANKFTG 319 (386)
T ss_dssp EEEEEE-TT-EEEEEETTTTEEEEEETTTC
T ss_pred eEEEEE-CC-EEEEeeCCCCeEEEEECCCC
Confidence 777773 34 67777777788888885443
No 264
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.83 E-value=0.24 Score=44.93 Aligned_cols=160 Identities=9% Similarity=-0.108 Sum_probs=99.2
Q ss_pred CceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCeE
Q 018322 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRL 245 (358)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~l 245 (358)
.....+++.+.+..++.+-...+.|.+.++... .....+........+|++.|.+..++
T Consensus 116 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~---------------------~~~~l~~~~l~~P~~iavdp~~g~ly 174 (349)
T 3v64_C 116 ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA---------------------HRKVLLWQSLEKPRAIALHPMEGTIY 174 (349)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSC---------------------SCEEEECTTCSCEEEEEEETTTTEEE
T ss_pred CCccEEEEecCCCeEEEEcCCCCeEEEEcCCCC---------------------ceEEEEeCCCCCcceEEEecCcCeEE
Confidence 445778888766577777777788999888651 11222323334678899998765244
Q ss_pred EEEeCC-CcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEecCCCCeE
Q 018322 246 VTGDCN-SCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVN 324 (358)
Q Consensus 246 ~sgs~d-g~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~ 324 (358)
++-... +.|...++....... .....-...+.|+|+|.+..++.+-+..+.|..+|+.... ....+........
T Consensus 175 ~td~~~~~~I~r~~~dG~~~~~----~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~-~~~~~~~~~~~P~ 249 (349)
T 3v64_C 175 WTDWGNTPRIEASSMDGSGRRI----IADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSH-RKAVISQGLPHPF 249 (349)
T ss_dssp EEECSSSCEEEEEETTSCSCEE----SCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSSCSSEE
T ss_pred EeccCCCCEEEEEeCCCCCcEE----EEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCc-eEEEEeCCCCCce
Confidence 444444 778888875422111 1112234578999998777577777778899999987532 2222333334567
Q ss_pred EEEEeCCCCcEEEEEeCCCCEEEEeCCCC
Q 018322 325 VISWNRLASCLLASGSDDGTFSIHDLRLL 353 (358)
Q Consensus 325 ~i~~~p~~~~~lasgs~Dg~i~iwDlr~~ 353 (358)
.|++. .+ .++.+-...+.|..++..++
T Consensus 250 giav~-~~-~ly~td~~~~~V~~~~~~~G 276 (349)
T 3v64_C 250 AITVF-ED-SLYWTDWHTKSINSANKFTG 276 (349)
T ss_dssp EEEEE-TT-EEEEEETTTTEEEEEETTTC
T ss_pred EEEEE-CC-EEEEecCCCCeEEEEEccCC
Confidence 77773 34 67777667778888875443
No 265
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.75 E-value=0.17 Score=46.98 Aligned_cols=113 Identities=11% Similarity=0.118 Sum_probs=75.8
Q ss_pred CeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCccc--------CCCcccc------CCCcEEEEEECCCCCC--EEEE
Q 018322 231 EGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNV--------DPNPFIG------HSASVEDLQWSPTEPD--VFAS 294 (358)
Q Consensus 231 ~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~--------~~~~~~~------h~~~V~~v~~sp~~~~--~las 294 (358)
.+..+..||.|. +||..+ +..|.|-.+..+..... ..+.+.- ...+|..+.|||-+.+ .|++
T Consensus 67 ~i~qlvlSpsG~-lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVV 144 (452)
T 3pbp_A 67 DTFHVISSTSGD-LLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVV 144 (452)
T ss_dssp TTCEEEECTTSS-EEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEE
T ss_pred ceeEEEECCCCC-EEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEE
Confidence 678899999998 888776 66899998874221110 0011111 2467999999997643 8999
Q ss_pred EECCCcEEEEECCCCC-CeeEEE---------ecCCCCeEEEEEeCCCCcEEEEEe--CCCCEEE
Q 018322 295 CSVDGHIAIWDTRVGK-SALTSF---------KAHNADVNVISWNRLASCLLASGS--DDGTFSI 347 (358)
Q Consensus 295 ~s~Dg~I~iwD~r~~~-~~~~~~---------~~h~~~V~~i~~~p~~~~~lasgs--~Dg~i~i 347 (358)
-..|+.||+||+.... .|. .+ ......|.+++|..++ -.|...+ ..|-|+-
T Consensus 145 LtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~-lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 145 LKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDG-LTLYCLNTTEGGDIFA 207 (452)
T ss_dssp EETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTS-SCEEEEECTTSCEEEE
T ss_pred EecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCC-cEEEEEecCCCCCEEE
Confidence 9999999999998622 233 22 2233578999999876 5555533 6676653
No 266
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.51 E-value=0.41 Score=42.56 Aligned_cols=159 Identities=10% Similarity=-0.056 Sum_probs=99.4
Q ss_pred CceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCeE
Q 018322 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRL 245 (358)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~l 245 (358)
.....+++.+.+..+.++-...+.|.++++... .....+........+++..|.+. .|
T Consensus 77 ~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~---------------------~~~~~~~~~~~~P~~iavdp~~g-~l 134 (316)
T 1ijq_A 77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV---------------------KRKTLFRENGSKPRAIVVDPVHG-FM 134 (316)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSS---------------------SEEEEEECTTCCEEEEEEETTTT-EE
T ss_pred CCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC---------------------ceEEEEECCCCCcceEEeCCCCC-EE
Confidence 456788888755467777677888999987651 11112222334678899998665 55
Q ss_pred EEEeC-C-CcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEE-ec--CC
Q 018322 246 VTGDC-N-SCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSF-KA--HN 320 (358)
Q Consensus 246 ~sgs~-d-g~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~-~~--h~ 320 (358)
+.++. . +.|...++....... .....-...+.|+|+|.+..++.+-+..+.|..+|+.... ...+ .. ..
T Consensus 135 y~~d~~~~~~I~~~~~dG~~~~~----~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~--~~~~~~~~~~~ 208 (316)
T 1ijq_A 135 YWTDWGTPAKIKKGGLNGVDIYS----LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN--RKTILEDEKRL 208 (316)
T ss_dssp EEEECSSSCEEEEEETTSCCEEE----EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS--CEEEEECTTTT
T ss_pred EEEccCCCCeEEEEcCCCCCeEE----EEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCc--eEEEeecCCcc
Confidence 54443 2 678888774321111 0111234578999999877577777777899999987522 2222 21 22
Q ss_pred CCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 321 ADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 321 ~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
.....|++. .+ .++.+-...+.|..+|..+++
T Consensus 209 ~~P~giav~-~~-~ly~~d~~~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 209 AHPFSLAVF-ED-KVFWTDIINEAIFSANRLTGS 240 (316)
T ss_dssp SSEEEEEEE-TT-EEEEEETTTTEEEEEETTTCC
T ss_pred CCcEEEEEE-CC-EEEEEECCCCeEEEEeCCCCc
Confidence 345677775 34 677777777889988876543
No 267
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.47 E-value=0.12 Score=48.64 Aligned_cols=155 Identities=10% Similarity=0.056 Sum_probs=90.0
Q ss_pred ceeEEEEcCC--CCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCe
Q 018322 167 CVNRIRAMTQ--NPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGR 244 (358)
Q Consensus 167 ~V~~i~~~p~--~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~ 244 (358)
....|.+.|+ +..++++-.. +.|+.++... ..+..+........+|+|++++. +
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~----------------------g~v~~~~~~~~~P~giavd~dG~-l 195 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVN----------------------QYVDIKTTNIGQCADVNFTLNGD-M 195 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBT-SCEEEEETTT----------------------TEEEEECCCCSCEEEEEECTTCC-E
T ss_pred CCceEEEccccCCCEEEEEeCC-CCEEEEECCC----------------------CEEEEeecCCCCccEEEECCCCC-E
Confidence 3567888884 2245554333 7888888754 22333333445688999999997 6
Q ss_pred EEEEeCC---C-cEEEEecCCCCCcccCCCccccCCCcEEEEEECC-CCCCEEEEEECCCcEEEEECCCCCCeeEEE-ec
Q 018322 245 LVTGDCN---S-CIYLWEPASDATWNVDPNPFIGHSASVEDLQWSP-TEPDVFASCSVDGHIAIWDTRVGKSALTSF-KA 318 (358)
Q Consensus 245 l~sgs~d---g-~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp-~~~~~las~s~Dg~I~iwD~r~~~~~~~~~-~~ 318 (358)
+++.... . .+...+... .+.. ...+ ........++++| .+. ++++-..++.|+.+|..++. ....+ ..
T Consensus 196 yVad~~~~~~~~gv~~~~~~~--~~~~-~~~~-~~~~~P~giavd~~~G~-lyv~d~~~~~V~~~d~~~g~-~~~~~~~~ 269 (433)
T 4hw6_A 196 VVVDDQSSDTNTGIYLFTRAS--GFTE-RLSL-CNARGAKTCAVHPQNGK-IYYTRYHHAMISSYDPATGT-LTEEEVMM 269 (433)
T ss_dssp EEEECCSCTTSEEEEEECGGG--TTCC-EEEE-EECSSBCCCEECTTTCC-EEECBTTCSEEEEECTTTCC-EEEEEEEC
T ss_pred EEEcCCCCcccceEEEEECCC--Ceec-cccc-cccCCCCEEEEeCCCCe-EEEEECCCCEEEEEECCCCe-EEEEEecc
Confidence 5554421 1 233333221 1110 0011 1234456788999 554 77777778899999987543 21222 11
Q ss_pred -CCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCC
Q 018322 319 -HNADVNVISWNRLASCLLASGSDDGTFSIHDLR 351 (358)
Q Consensus 319 -h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr 351 (358)
....-..|+|+|++..++++-...+.|..+++.
T Consensus 270 ~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 270 DTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp SCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred CCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 122235699999994366666667889998864
No 268
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.43 E-value=0.19 Score=45.09 Aligned_cols=158 Identities=11% Similarity=0.073 Sum_probs=87.8
Q ss_pred ecCCCceeEEEEcCCCCcEEEEEeCCCcEEE-EeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCC
Q 018322 162 VAHQGCVNRIRAMTQNPHICASWADTGHVQV-WDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPI 240 (358)
Q Consensus 162 ~~H~~~V~~i~~~p~~~~~lat~s~dg~V~i-wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~ 240 (358)
.++.+.+..+.+.+.+ .+++.+. .|.+.. +|-... ..+++ -......+..+.+.+.
T Consensus 159 ~~~~~~~~~~~~~~~~-~~~~~g~-~G~~~~S~d~gG~-------------------tW~~~--~~~~~~~~~~~~~~~~ 215 (327)
T 2xbg_A 159 QEAIGVMRNLNRSPSG-EYVAVSS-RGSFYSTWEPGQT-------------------AWEPH--NRTTSRRLHNMGFTPD 215 (327)
T ss_dssp CSCCCCEEEEEECTTS-CEEEEET-TSSEEEEECTTCS-------------------SCEEE--ECCSSSCEEEEEECTT
T ss_pred cCCCcceEEEEEcCCC-cEEEEEC-CCcEEEEeCCCCC-------------------ceeEC--CCCCCCccceeEECCC
Confidence 3556778888888877 5666654 444433 332110 12222 1233457788999887
Q ss_pred CCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEe---
Q 018322 241 TTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFK--- 317 (358)
Q Consensus 241 ~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~--- 317 (358)
+. . +.++.+|.+++++...+..|......-..+...+.++.+.+.+. +++.+ .+|.|. +....+. .-..+.
T Consensus 216 g~-~-~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~-~~~~g-~~g~i~-~S~DgG~-tW~~~~~~~ 289 (327)
T 2xbg_A 216 GR-L-WMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNE-VWLAG-GAGALL-CSQDGGQ-TWQQDVDVK 289 (327)
T ss_dssp SC-E-EEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSC-EEEEE-STTCEE-EESSTTS-SCEECGGGT
T ss_pred CC-E-EEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCE-EEEEe-CCCeEE-EeCCCCc-ccEEcCccC
Confidence 65 4 45556788877642222333311111011234588999998765 55554 467763 3333332 222232
Q ss_pred cCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeC
Q 018322 318 AHNADVNVISWNRLASCLLASGSDDGTFSIHDL 350 (358)
Q Consensus 318 ~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDl 350 (358)
.....+++|.|.+++ .++.++.+|.|.-++-
T Consensus 290 ~~~~~~~~v~~~~~~--~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 290 KVPSNFYKILFFSPD--QGFILGQKGILLRYVT 320 (327)
T ss_dssp TSSSCCCEEEEEETT--EEEEECSTTEEEEECC
T ss_pred CCCCCeEEEEEECCC--ceEEEcCCceEEEEcC
Confidence 134568889997555 4556678898877765
No 269
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.35 E-value=0.05 Score=54.40 Aligned_cols=73 Identities=11% Similarity=0.167 Sum_probs=49.3
Q ss_pred EEEECCCCCCEEEEEECCCc-------------------EEEEECCCCCCeeEEEec--CC-------CCeEEEEEeCCC
Q 018322 281 DLQWSPTEPDVFASCSVDGH-------------------IAIWDTRVGKSALTSFKA--HN-------ADVNVISWNRLA 332 (358)
Q Consensus 281 ~v~~sp~~~~~las~s~Dg~-------------------I~iwD~r~~~~~~~~~~~--h~-------~~V~~i~~~p~~ 332 (358)
.++++|... +++.++.++. |..||.++++ .+..+.. |. ..+.......++
T Consensus 239 ~~~~d~~~~-~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~-~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G 316 (689)
T 1yiq_A 239 SFAYDPELN-LLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGE-YVWHYQTTPGDAWDYTATQHMILAELPIDG 316 (689)
T ss_dssp CEEEETTTT-EEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCC-EEEEEESSTTCCSCCCCCSCEEEEEEEETT
T ss_pred ceeEcCCCC-EEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCc-eeEeeecCCcccccccCCCCcEEEeeccCC
Confidence 567888777 7888877763 9999999964 5555543 22 112222222344
Q ss_pred C--cEEEEEeCCCCEEEEeCCCCCC
Q 018322 333 S--CLLASGSDDGTFSIHDLRLLKV 355 (358)
Q Consensus 333 ~--~~lasgs~Dg~i~iwDlr~~~~ 355 (358)
. ..|+.++.+|.|+++|.++++.
T Consensus 317 ~~~~~v~~~~~~G~l~~lD~~tG~~ 341 (689)
T 1yiq_A 317 KPRKVLMQAPKNGFFYVIDRATGEL 341 (689)
T ss_dssp EEEEEEEECCTTSEEEEEETTTCCE
T ss_pred cEEEEEEEECCCCeEEEEECCCCCE
Confidence 1 2788899999999999998764
No 270
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.31 E-value=0.18 Score=45.72 Aligned_cols=100 Identities=11% Similarity=0.161 Sum_probs=59.5
Q ss_pred CeEEEEeCCCcEEEEecCCCCC-cccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEecCCC
Q 018322 243 GRLVTGDCNSCIYLWEPASDAT-WNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNA 321 (358)
Q Consensus 243 ~~l~sgs~dg~I~lwd~~~~~~-~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~ 321 (358)
+.++.++.++.|..+|..++.. |. +............. +. .++.++.++.|..+|.+++. .+........
T Consensus 104 ~~v~v~~~~g~l~a~d~~tG~~~W~-----~~~~~~~~~~p~~~--~~-~v~v~~~~g~l~~~d~~tG~-~~W~~~~~~~ 174 (376)
T 3q7m_A 104 GHVYIGSEKAQVYALNTSDGTVAWQ-----TKVAGEALSRPVVS--DG-LVLIHTSNGQLQALNEADGA-VKWTVNLDMP 174 (376)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEE-----EECSSCCCSCCEEE--TT-EEEEECTTSEEEEEETTTCC-EEEEEECCC-
T ss_pred CEEEEEcCCCEEEEEECCCCCEEEE-----EeCCCceEcCCEEE--CC-EEEEEcCCCeEEEEECCCCc-EEEEEeCCCC
Confidence 3788888899999999987432 22 11111111111111 23 67778889999999998864 4444433221
Q ss_pred Ce-----EEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 322 DV-----NVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 322 ~V-----~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
.. ...... + ..++.++.+|.|..+|.++++
T Consensus 175 ~~~~~~~~~~~~~-~--~~v~~g~~~g~l~~~d~~tG~ 209 (376)
T 3q7m_A 175 SLSLRGESAPTTA-F--GAAVVGGDNGRVSAVLMEQGQ 209 (376)
T ss_dssp ----CCCCCCEEE-T--TEEEECCTTTEEEEEETTTCC
T ss_pred ceeecCCCCcEEE-C--CEEEEEcCCCEEEEEECCCCc
Confidence 11 112222 2 357777888999999988765
No 271
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.30 E-value=0.28 Score=45.45 Aligned_cols=125 Identities=10% Similarity=0.006 Sum_probs=76.4
Q ss_pred CCCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEEC
Q 018322 227 GHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDT 306 (358)
Q Consensus 227 ~h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~ 306 (358)
.....+.+|+|++....++++-...+.|+.+++............+.........|++.+.+.+++.+-...+.|.+.++
T Consensus 109 ~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~ 188 (400)
T 3p5b_L 109 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT 188 (400)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECT
T ss_pred cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeC
Confidence 34457889999987652444444578899898864211000001112233567889998866657888778889999998
Q ss_pred CCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeC-CCCEEEEeCCC
Q 018322 307 RVGKSALTSFKAHNADVNVISWNRLASCLLASGSD-DGTFSIHDLRL 352 (358)
Q Consensus 307 r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~-Dg~i~iwDlr~ 352 (358)
... .....+.......+.|++.|.+..++.+-.. .+.|...++..
T Consensus 189 ~g~-~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG 234 (400)
T 3p5b_L 189 KGV-KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 234 (400)
T ss_dssp TTC-SEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTS
T ss_pred CCC-ceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCC
Confidence 753 2333333344457899999966355555433 46788888754
No 272
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.25 E-value=0.011 Score=59.38 Aligned_cols=165 Identities=10% Similarity=-0.072 Sum_probs=91.7
Q ss_pred CceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCeE
Q 018322 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRL 245 (358)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~l 245 (358)
..+..|.|.+.+..++.+-...+.|+.+++...... ......+........+|++.+.+..++
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~-----------------~~~~~~i~~~~~~P~glavD~~~g~LY 468 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV-----------------SSYDTVISRDIQAPDGLAVDWIHSNIY 468 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC------------------CCCCCBCCSCC--CCCEECCCSSSBCE
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCC-----------------cceEEEEeCCCCCcceEEEEeeCCcEE
Confidence 445667777765455555455667777777541000 011111111112234567765444255
Q ss_pred EEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECC-CcEEEEECCCCCCeeEEEecCCCCeE
Q 018322 246 VTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVD-GHIAIWDTRVGKSALTSFKAHNADVN 324 (358)
Q Consensus 246 ~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~D-g~I~iwD~r~~~~~~~~~~~h~~~V~ 324 (358)
++-...+.|.++++....... .+.........|+++|.+..++++-... +.|..+++.... ....+...-...+
T Consensus 469 ~tD~~~~~I~v~d~dg~~~~~----l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~-~~~l~~~~l~~Pn 543 (699)
T 1n7d_A 469 WTDSVLGTVSVADTKGVKRKT----LFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWPN 543 (699)
T ss_dssp ECCTTTSCEEEEBSSSCCEEE----ECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC-CCEESCSSCSSCC
T ss_pred EEeccCCeEEEEecCCCceEE----EEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC-eeEEEeCCCCCcc
Confidence 554567889999886422111 1111223457789999766566655433 778887775422 1111222234567
Q ss_pred EEEEeCCCCcEEEEEeCCCCEEEEeCCC
Q 018322 325 VISWNRLASCLLASGSDDGTFSIHDLRL 352 (358)
Q Consensus 325 ~i~~~p~~~~~lasgs~Dg~i~iwDlr~ 352 (358)
.|+|+|.+..++++-+..+.|..+|+..
T Consensus 544 Glavd~~~~~LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 544 GITLDLLSGRLYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp CEEECTTTCCEEEEETTTTEEEEECSSS
T ss_pred EEEEeccCCEEEEEecCCCeEEEEccCC
Confidence 8999998757777777778899998854
No 273
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.23 E-value=0.26 Score=44.66 Aligned_cols=133 Identities=14% Similarity=0.078 Sum_probs=78.9
Q ss_pred EEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCeEEEEeCCCcEEEEec
Q 018322 180 ICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEP 259 (358)
Q Consensus 180 ~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~ 259 (358)
.+..++.+|.|..+|... .+.+.... .....++... +. .++.++.++.|..+|.
T Consensus 241 ~v~~~~~~g~l~~~d~~t---------------------G~~~w~~~--~~~~~~~~~~--~~-~l~~~~~~g~l~~~d~ 294 (376)
T 3q7m_A 241 VVFALAYNGNLTALDLRS---------------------GQIMWKRE--LGSVNDFIVD--GN-RIYLVDQNDRVMALTI 294 (376)
T ss_dssp EEEEECTTSCEEEEETTT---------------------CCEEEEEC--CCCEEEEEEE--TT-EEEEEETTCCEEEEET
T ss_pred EEEEEecCcEEEEEECCC---------------------CcEEeecc--CCCCCCceEE--CC-EEEEEcCCCeEEEEEC
Confidence 566667788899998865 23333222 1223334332 33 7888888999999999
Q ss_pred CCCCC-cccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEecCCCCeEE-EEEeCCCCcEEE
Q 018322 260 ASDAT-WNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNV-ISWNRLASCLLA 337 (358)
Q Consensus 260 ~~~~~-~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~-i~~~p~~~~~la 337 (358)
.++.. |... .. ....+...... +. .++.++.+|.|.++|.+++ ..+.........+.. .... + ..|+
T Consensus 295 ~tG~~~w~~~--~~--~~~~~~~~~~~--~~-~l~v~~~~g~l~~~d~~tG-~~~~~~~~~~~~~~~~~~~~-~--~~l~ 363 (376)
T 3q7m_A 295 DGGVTLWTQS--DL--LHRLLTSPVLY--NG-NLVVGDSEGYLHWINVEDG-RFVAQQKVDSSGFQTEPVAA-D--GKLL 363 (376)
T ss_dssp TTCCEEEEEC--TT--TTSCCCCCEEE--TT-EEEEECTTSEEEEEETTTC-CEEEEEECCTTCBCSCCEEE-T--TEEE
T ss_pred CCCcEEEeec--cc--CCCcccCCEEE--CC-EEEEEeCCCeEEEEECCCC-cEEEEEecCCCcceeCCEEE-C--CEEE
Confidence 77432 2110 01 11111112221 33 6888889999999999986 455555443333322 2222 3 4677
Q ss_pred EEeCCCCEEEEe
Q 018322 338 SGSDDGTFSIHD 349 (358)
Q Consensus 338 sgs~Dg~i~iwD 349 (358)
.++.+|.|..|+
T Consensus 364 v~~~~G~l~~~~ 375 (376)
T 3q7m_A 364 IQAKDGTVYSIT 375 (376)
T ss_dssp EEBTTSCEEEEE
T ss_pred EEeCCCEEEEEe
Confidence 788999999987
No 274
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.22 E-value=0.61 Score=47.14 Aligned_cols=162 Identities=12% Similarity=0.019 Sum_probs=98.2
Q ss_pred CceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCeE
Q 018322 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRL 245 (358)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~l 245 (358)
..|++|...+++ .+-.|+.++-|..|+.....-.. . ...+. .-.-....|.++...+++ .|
T Consensus 310 ~~i~~i~~D~~g--~lWigt~~~Gl~~~~~~~~~~~~--~------------~~~~~-~~~l~~~~V~~i~~d~~g--~l 370 (795)
T 4a2l_A 310 RSVRSIFMDSQG--GMWLGTYFGGLNYYHPIRNRFKN--I------------RNIPY-KNSLSDNVVSCIVEDKDK--NL 370 (795)
T ss_dssp SCEEEEEECTTS--CEEEEESSSCEEEECGGGGSSEE--E------------CCCTT-SSSCSCSSEEEEEECTTS--CE
T ss_pred CcEEEEEEeCCc--CEEEEECCCCeEEeCCCcccceE--E------------cCCCC-CCCCCCCeeEEEEECCCC--CE
Confidence 468888888877 34556777778888764411000 0 00000 000123468899887765 57
Q ss_pred EEEeCCCcEEEEecCCCCCcccCCCcc-----ccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEe---
Q 018322 246 VTGDCNSCIYLWEPASDATWNVDPNPF-----IGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFK--- 317 (358)
Q Consensus 246 ~sgs~dg~I~lwd~~~~~~~~~~~~~~-----~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~--- 317 (358)
..|+.++-|..|+..+. ......... .-....|.++...+++. +|..|+.++-|.+||..++. +..+.
T Consensus 371 WiGt~~~Gl~~~~~~~~-~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-~lWigt~~~Gl~~~d~~~~~--~~~~~~~~ 446 (795)
T 4a2l_A 371 WIGTNDGGLNLYNPITQ-RFTSYTLQEDESARGIGSNNIKAVYVDEKKS-LVYIGTHAGGLSILHRNSGQ--VENFNQRN 446 (795)
T ss_dssp EEEESSSCEEEECTTTC-CEEEECCC------CCSCSCEEEEEEETTTT-EEEEEETTTEEEEEETTTCC--EEEECTTT
T ss_pred EEEECCCCeEEEcCCCC-cEEEEecCCCCcccCCCCccEEEEEEcCCCC-EEEEEeCcCceeEEeCCCCc--EEEeecCC
Confidence 77888888999998653 221100000 01235789998887775 57778887889999988742 33332
Q ss_pred --cCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCC
Q 018322 318 --AHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLL 353 (358)
Q Consensus 318 --~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~ 353 (358)
.....|.++...+++ .+.+.. . +-|.+||..+.
T Consensus 447 ~~l~~~~v~~i~~d~~g-~lwigt-~-~Gl~~~~~~~~ 481 (795)
T 4a2l_A 447 SQLVNENVYAILPDGEG-NLWLGT-L-SALVRFNPEQR 481 (795)
T ss_dssp SCCSCSCEEEEEECSSS-CEEEEE-S-SCEEEEETTTT
T ss_pred CCcCCCeeEEEEECCCC-CEEEEe-c-CceeEEeCCCC
Confidence 234578999988888 555443 3 45888887653
No 275
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.20 E-value=0.57 Score=47.36 Aligned_cols=154 Identities=8% Similarity=0.052 Sum_probs=95.1
Q ss_pred CceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEc---------CCCCCeEEEE
Q 018322 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG---------GHKDEGYAID 236 (358)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~h~~~v~~l~ 236 (358)
..|.++...+++ .|-.|+.++-|..|+..... ...+. -....|+++.
T Consensus 357 ~~V~~i~~d~~g--~lWiGt~~~Gl~~~~~~~~~----------------------~~~~~~~~~~~~~~l~~~~v~~i~ 412 (795)
T 4a2l_A 357 NVVSCIVEDKDK--NLWIGTNDGGLNLYNPITQR----------------------FTSYTLQEDESARGIGSNNIKAVY 412 (795)
T ss_dssp SSEEEEEECTTS--CEEEEESSSCEEEECTTTCC----------------------EEEECCC------CCSCSCEEEEE
T ss_pred CeeEEEEECCCC--CEEEEECCCCeEEEcCCCCc----------------------EEEEecCCCCcccCCCCccEEEEE
Confidence 458888887777 34456777778999876521 11111 1234688888
Q ss_pred eCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEE
Q 018322 237 WNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSF 316 (358)
Q Consensus 237 ~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~ 316 (358)
..+.+. .|..|+.++-|.+|+..++.........-......|.++...+++. +.+ |+. +-|.+||..++ ....+
T Consensus 413 ~d~~g~-~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lwi-gt~-~Gl~~~~~~~~--~~~~~ 486 (795)
T 4a2l_A 413 VDEKKS-LVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGN-LWL-GTL-SALVRFNPEQR--SFTTI 486 (795)
T ss_dssp EETTTT-EEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSC-EEE-EES-SCEEEEETTTT--EEEEC
T ss_pred EcCCCC-EEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCC-EEE-Eec-CceeEEeCCCC--eEEEc
Confidence 877653 4888988788999998763221110000002345799999988887 444 444 55888998763 22222
Q ss_pred ec-------CCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCC
Q 018322 317 KA-------HNADVNVISWNRLASCLLASGSDDGTFSIHDLRL 352 (358)
Q Consensus 317 ~~-------h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~ 352 (358)
.. ....|.++...+++ .+.+.. . +-|..||..+
T Consensus 487 ~~~~~~~~~~~~~i~~i~~d~~g-~lWigt-~-~Gl~~~~~~~ 526 (795)
T 4a2l_A 487 EKEKDGTPVVSKQITTLFRDSHK-RLWIGG-E-EGLSVFKQEG 526 (795)
T ss_dssp CBCTTCCBCCCCCEEEEEECTTC-CEEEEE-S-SCEEEEEEET
T ss_pred cccccccccCCceEEEEEECCCC-CEEEEe-C-CceEEEeCCC
Confidence 21 23578999999888 555544 3 4577787654
No 276
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.16 E-value=0.66 Score=41.38 Aligned_cols=160 Identities=10% Similarity=-0.055 Sum_probs=100.2
Q ss_pred CceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCeE
Q 018322 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRL 245 (358)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~l 245 (358)
.....+++.+.+..++.+-...+.|.++++... .....+........+|++.|.+. .|
T Consensus 79 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~---------------------~~~~l~~~~~~~P~giavdp~~g-~l 136 (318)
T 3sov_A 79 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS---------------------LRKVLFWQELDQPRAIALDPSSG-FM 136 (318)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSC---------------------SCEEEECSSCSSEEEEEEEGGGT-EE
T ss_pred CCccEEEEEcCCCeEEEEECCCCEEEEEECCCC---------------------cEEEEEeCCCCCccEEEEeCCCC-EE
Confidence 456778888766577777777788999988651 11122223334667899988764 56
Q ss_pred EEEeC--CCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEecCCCCe
Q 018322 246 VTGDC--NSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADV 323 (358)
Q Consensus 246 ~sgs~--dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V 323 (358)
+.+.. .+.|...++....... .....-...+.|+|+|.+..++.+-+..+.|..+|+.... ....+.......
T Consensus 137 y~td~~~~~~I~r~~~dG~~~~~----~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~-~~~~~~~~~~~P 211 (318)
T 3sov_A 137 YWTDWGEVPKIERAGMDGSSRFI----IINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN-RQAVVKGSLPHP 211 (318)
T ss_dssp EEEECSSSCEEEEEETTSCSCEE----EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSCCSCE
T ss_pred EEEecCCCCEEEEEEcCCCCeEE----EEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCc-eEEEecCCCCCc
Confidence 55552 5678877775321111 1111224568999999777577777778899999987422 222222233456
Q ss_pred EEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 324 NVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 324 ~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
..|++.. + .++.+-...+.|..++..+++
T Consensus 212 ~glav~~-~-~lywtd~~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 212 FALTLFE-D-ILYWTDWSTHSILACNKYTGE 240 (318)
T ss_dssp EEEEEET-T-EEEEEETTTTEEEEEETTTCC
T ss_pred eEEEEeC-C-EEEEEecCCCeEEEEECCCCC
Confidence 6777753 3 567776677889888886554
No 277
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.11 E-value=0.52 Score=49.90 Aligned_cols=221 Identities=15% Similarity=0.126 Sum_probs=122.6
Q ss_pred eeChhHHHhhhcccccCc--ceeEEEEeccCCCccccCCceEEEEEeecCCC-----CCCceEEEEEeeccCCccccCCC
Q 018322 51 QCDPTAYNSLHAFHIGWP--CLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEK-----PSWNSIGVFKVSNISGKRRELVP 123 (358)
Q Consensus 51 ~~~~~~Y~~~~~~~~~wP--~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~-----~~~n~i~i~~~~~l~~~~~~~~~ 123 (358)
.+||..+..++.+.++-- ++|+..+. +...+ ..||++||---. ...+.|+|+++.+
T Consensus 811 lidp~t~~~i~~~~l~~nE~~~sv~~v~--~~~~~-----~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~---------- 873 (1158)
T 3ei3_A 811 IIDQHTFEVLHAHQFLQNEYALSLVSCK--LGKDP-----NTYFIVGTAMVYPEEAEPKQGRIVVFQYSD---------- 873 (1158)
T ss_dssp EEETTTCCEEEEEECCTTEEEEEEEEEC--CTTCC-----CCEEEEEEEECCTTCSSCCCEEEEEEEEET----------
T ss_pred EEeCCCCeEEEEEeCCCCcceEEEEEEE--EccCC-----CEEEEEEeeecCCCCCCCCceEEEEEEEEC----------
Confidence 456666666665555432 23444332 11111 258999996432 3578999999840
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCeEEEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccc
Q 018322 124 NKPSNDDEDVDSESSDSDEDSDDDEEGGSGTPILQLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALA 203 (358)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~ 203 (358)
............|+|+++.-.. | +++|..+ .+|+||++...
T Consensus 874 ------------------------------~kL~lv~~~~v~g~v~al~~~~-g-~Lla~ig--~~l~vy~l~~~----- 914 (1158)
T 3ei3_A 874 ------------------------------GKLQTVAEKEVKGAVYSMVEFN-G-KLLASIN--STVRLYEWTTE----- 914 (1158)
T ss_dssp ------------------------------TEEEEEEEEEESSCEEEEEEET-T-EEEEEET--TEEEEEEECTT-----
T ss_pred ------------------------------CEEEEEEEEEcCCcCEEEeeeC-C-EEEEEcC--CEEEEEECCCC-----
Confidence 1122234445689999988664 4 5666544 68999999762
Q ss_pred cccccccCCCCCCCCCCCcE-EEcCCCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEE
Q 018322 204 ESETIVGQGAPQVSNQSPLV-KFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDL 282 (358)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~-~~~~h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v 282 (358)
+.+. ....+. .+..+.....+. +++.|+.-..|.++..+....... ...-..+...++++
T Consensus 915 ----------------~~L~~~~~~~~-~i~~~~l~~~~~-~I~vgD~~~Sv~~~~y~~~~~~L~-~~a~D~~~~~vta~ 975 (1158)
T 3ei3_A 915 ----------------KELRTECNHYN-NIMALYLKTKGD-FILVGDLMRSVLLLAYKPMEGNFE-EIARDFNPNWMSAV 975 (1158)
T ss_dssp ----------------SCEEEEEEECC-CSCEEEEEEETT-EEEEEESSBCEEEEEEETTTTEEE-EEEECCSCBCEEEE
T ss_pred ----------------ceEEEEeeccc-cEEEEEEeccCC-EEEEEEhhheEEEEEEEcCCCeEE-EEEeecccccEEEE
Confidence 1111 111111 122223223455 999999888888876644222110 00111245567888
Q ss_pred EECCCCCCEEEEEECCCcEEEEECCCCC------Cee-EEEec-CCCCeEEEE---EeCCC--------CcEEEEEeCCC
Q 018322 283 QWSPTEPDVFASCSVDGHIAIWDTRVGK------SAL-TSFKA-HNADVNVIS---WNRLA--------SCLLASGSDDG 343 (358)
Q Consensus 283 ~~sp~~~~~las~s~Dg~I~iwD~r~~~------~~~-~~~~~-h~~~V~~i~---~~p~~--------~~~lasgs~Dg 343 (358)
.+--.+ .++.+..+|.|.+....... ..+ ..-.- .+..|+++. +.+.+ ...++-|+.+|
T Consensus 976 ~~ld~~--t~l~aD~~gNl~vl~~~~~~~~~~~~~~L~~~~~fhlG~~vt~~~~~sl~~~~~~~~~~~~~~~il~~T~~G 1053 (1158)
T 3ei3_A 976 EILDDD--NFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNG 1053 (1158)
T ss_dssp EEEETT--EEEEEETTSEEEEEEECTTCCSTTGGGBEEEEEEEECSSCEEEEEECCSCCC-------CEEEEEEEEETTS
T ss_pred EEEccC--cEEEEcCCCcEEEEecCCCCCCccccceeeeEEEEeCCCcEeeEEeeeeecCCCccccccccceEEEEecCC
Confidence 876443 67889999999998664311 111 11122 245677775 33322 24577778889
Q ss_pred CEEEE
Q 018322 344 TFSIH 348 (358)
Q Consensus 344 ~i~iw 348 (358)
.|.+.
T Consensus 1054 sIg~l 1058 (1158)
T 3ei3_A 1054 MIGLV 1058 (1158)
T ss_dssp CEEEE
T ss_pred EEEEE
Confidence 88764
No 278
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=96.05 E-value=0.63 Score=40.17 Aligned_cols=166 Identities=7% Similarity=-0.011 Sum_probs=97.4
Q ss_pred CceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCeE
Q 018322 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRL 245 (358)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~l 245 (358)
+..-.|++.+.+ .++++.-.++.+.++++..... ....... ..++. .........+|+|+|.+. .|
T Consensus 70 ~D~EGIa~~~~g-~~~vs~E~~~~l~~~~v~~~~~-i~~~~~~----------~~~~~-~~~~N~g~EGLA~d~~~~-~L 135 (255)
T 3qqz_A 70 KDLETIEYIGDN-QFVISDERDYAIYVISLTPNSE-VKILKKI----------KIPLQ-ESPTNCGFEGLAYSRQDH-TF 135 (255)
T ss_dssp SSEEEEEECSTT-EEEEEETTTTEEEEEEECTTCC-EEEEEEE----------ECCCS-SCCCSSCCEEEEEETTTT-EE
T ss_pred CChHHeEEeCCC-EEEEEECCCCcEEEEEcCCCCe-eeeeeee----------ccccc-cccccCCcceEEEeCCCC-EE
Confidence 577888888877 5656655667899998876321 0000000 00000 011234678999999987 66
Q ss_pred EEEeCCCcEEEEecCC--CCCcccCCCc--c--ccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEecC
Q 018322 246 VTGDCNSCIYLWEPAS--DATWNVDPNP--F--IGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAH 319 (358)
Q Consensus 246 ~sgs~dg~I~lwd~~~--~~~~~~~~~~--~--~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h 319 (358)
.++.......||.+.. .......... + ..+...+.+|+++|...++++.....+.|.++|... ..+..+.-.
T Consensus 136 ~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g--~~~~~~~L~ 213 (255)
T 3qqz_A 136 WFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVG--EVIGEMSLT 213 (255)
T ss_dssp EEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTC--CEEEEEECS
T ss_pred EEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCC--CEEEEEEcC
Confidence 6666555555665541 0100000000 0 113346789999998887888888889999999764 233333211
Q ss_pred C---------CCeEEEEEeCCCCcEEEEEeCCCCEEEEe
Q 018322 320 N---------ADVNVISWNRLASCLLASGSDDGTFSIHD 349 (358)
Q Consensus 320 ~---------~~V~~i~~~p~~~~~lasgs~Dg~i~iwD 349 (358)
. ..-..|+|.++| +++++ +.-+.++.|.
T Consensus 214 ~g~~~l~~~~~qpEGia~d~~G-~lyIv-sE~n~~y~f~ 250 (255)
T 3qqz_A 214 KGSRGLSHNIKQAEGVAMDASG-NIYIV-SEPNRFYRFT 250 (255)
T ss_dssp TTGGGCSSCCCSEEEEEECTTC-CEEEE-ETTTEEEEEE
T ss_pred CccCCcccccCCCCeeEECCCC-CEEEE-cCCceEEEEE
Confidence 1 256889999999 66666 5556666654
No 279
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.02 E-value=1.3 Score=43.55 Aligned_cols=162 Identities=8% Similarity=-0.102 Sum_probs=98.8
Q ss_pred CCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCe
Q 018322 165 QGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGR 244 (358)
Q Consensus 165 ~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~ 244 (358)
-..+..|.|.+.+..++.+-...+.|+.+++... .....+........+|++.+.+..+
T Consensus 36 ~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~---------------------~~~~v~~~g~~~P~GlAvD~~~~~L 94 (628)
T 4a0p_A 36 VKEASALDFDVTDNRIYWTDISLKTISRAFMNGS---------------------ALEHVVEFGLDYPEGMAVDWLGKNL 94 (628)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---------------------SCEEEECSSCSCCCEEEEETTTTEE
T ss_pred CCceEEEEEECCCCEEEEEECCCCeEEEEECCCC---------------------CcEEEEeCCCCCcceEEEEeCCCEE
Confidence 3567889999977677888777889998888651 1112222111223345554444424
Q ss_pred EEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEE-CCCcEEEEECCCCCCeeEEEecCCCCe
Q 018322 245 LVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCS-VDGHIAIWDTRVGKSALTSFKAHNADV 323 (358)
Q Consensus 245 l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s-~Dg~I~iwD~r~~~~~~~~~~~h~~~V 323 (358)
+++-...+.|.+.++....... .+...-....+|++.|....++.+-. ..+.|...++.... ...+...-...
T Consensus 95 Y~tD~~~~~I~v~~~dG~~~~~----l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~--~~~l~~~~~~P 168 (628)
T 4a0p_A 95 YWADTGTNRIEVSKLDGQHRQV----LVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE--RTTLVPNVGRA 168 (628)
T ss_dssp EEEETTTTEEEEEETTSTTCEE----EECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS--CEEEECSCSSE
T ss_pred EEEECCCCEEEEEecCCCcEEE----EEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc--eEEEECCCCCc
Confidence 4555557789998885422211 11123345789999996663555542 35677777776432 22232345568
Q ss_pred EEEEEeCCCCcEEEEEeCCCCEEEEeCCCC
Q 018322 324 NVISWNRLASCLLASGSDDGTFSIHDLRLL 353 (358)
Q Consensus 324 ~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~ 353 (358)
+.|++.+.+..++.+=...+.|..+|+...
T Consensus 169 ~GlalD~~~~~LY~aD~~~~~I~~~d~dG~ 198 (628)
T 4a0p_A 169 NGLTIDYAKRRLYWTDLDTNLIESSNMLGL 198 (628)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred ceEEEccccCEEEEEECCCCEEEEEcCCCC
Confidence 999999977466666566778888888653
No 280
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=95.89 E-value=0.29 Score=43.12 Aligned_cols=112 Identities=14% Similarity=0.027 Sum_probs=71.0
Q ss_pred CCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCC--cEEEEECC
Q 018322 230 DEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDG--HIAIWDTR 307 (358)
Q Consensus 230 ~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg--~I~iwD~r 307 (358)
....+++|++++. ++++-..++.|..||... .. . .+......+..+++.+++. ++++..... .|..+|..
T Consensus 32 ~~pegia~~~~g~-lyv~d~~~~~I~~~d~~g-~~-~----~~~~~~~~p~gia~~~dG~-l~vad~~~~~~~v~~~d~~ 103 (306)
T 2p4o_A 32 TFLENLASAPDGT-IFVTNHEVGEIVSITPDG-NQ-Q----IHATVEGKVSGLAFTSNGD-LVATGWNADSIPVVSLVKS 103 (306)
T ss_dssp CCEEEEEECTTSC-EEEEETTTTEEEEECTTC-CE-E----EEEECSSEEEEEEECTTSC-EEEEEECTTSCEEEEEECT
T ss_pred CCcceEEECCCCC-EEEEeCCCCeEEEECCCC-ce-E----EEEeCCCCceeEEEcCCCc-EEEEeccCCcceEEEEcCC
Confidence 4677999999876 666666789999998754 21 1 1112234688999999998 666654432 46667766
Q ss_pred CCCCeeEEEe--cCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCC
Q 018322 308 VGKSALTSFK--AHNADVNVISWNRLASCLLASGSDDGTFSIHDLRL 352 (358)
Q Consensus 308 ~~~~~~~~~~--~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~ 352 (358)
++. +..+. ......+.++..+.+ .++++-..++.|.++|...
T Consensus 104 ~g~--~~~~~~~~~~~~~~g~~~~~~~-~~~v~d~~~g~i~~~d~~~ 147 (306)
T 2p4o_A 104 DGT--VETLLTLPDAIFLNGITPLSDT-QYLTADSYRGAIWLIDVVQ 147 (306)
T ss_dssp TSC--EEEEEECTTCSCEEEEEESSSS-EEEEEETTTTEEEEEETTT
T ss_pred CCe--EEEEEeCCCccccCcccccCCC-cEEEEECCCCeEEEEeCCC
Confidence 643 22221 122334556655555 5566655688999998764
No 281
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=95.78 E-value=0.58 Score=43.80 Aligned_cols=159 Identities=11% Similarity=0.126 Sum_probs=93.4
Q ss_pred CceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCC-cEEE-cCCCCCeEEEEeCCCCCC
Q 018322 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSP-LVKF-GGHKDEGYAIDWNPITTG 243 (358)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~h~~~v~~l~~s~~~~~ 243 (358)
...+.+++.|.+..++++-..++.|+.++.... .. ...+ .+.....+.|+|+|++.
T Consensus 228 ~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g---------------------~~~~~~~~~~~~~~~~~ia~dpdG~- 285 (433)
T 4hw6_A 228 RGAKTCAVHPQNGKIYYTRYHHAMISSYDPATG---------------------TLTEEEVMMDTKGSNFHIVWHPTGD- 285 (433)
T ss_dssp SSBCCCEECTTTCCEEECBTTCSEEEEECTTTC---------------------CEEEEEEECSCCSSCEEEEECTTSS-
T ss_pred CCCCEEEEeCCCCeEEEEECCCCEEEEEECCCC---------------------eEEEEEeccCCCCCcccEEEeCCCC-
Confidence 345667888833367766666788888887631 11 0111 11122335799999997
Q ss_pred eEEEEe-CCCcEEEEecCCCCCcccCCCcccc---------------CCCcEEEEEE---------CCCCCCEEEEEECC
Q 018322 244 RLVTGD-CNSCIYLWEPASDATWNVDPNPFIG---------------HSASVEDLQW---------SPTEPDVFASCSVD 298 (358)
Q Consensus 244 ~l~sgs-~dg~I~lwd~~~~~~~~~~~~~~~~---------------h~~~V~~v~~---------sp~~~~~las~s~D 298 (358)
+|..+. ..+.|+.+++............+.+ .-.....+++ .+.+. ++++-...
T Consensus 286 ~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~-lyvaD~~n 364 (433)
T 4hw6_A 286 WAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYD-FYFCDRDS 364 (433)
T ss_dssp EEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEE-EEEEETTT
T ss_pred EEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCc-EEEEECCC
Confidence 555554 5678999886532111100011111 1124567888 66665 77777778
Q ss_pred CcEEEEECCCCCCeeEEEecC------------------CCCeEEEEEe-CCCCcEEEEEeCCCCEEEEeCC
Q 018322 299 GHIAIWDTRVGKSALTSFKAH------------------NADVNVISWN-RLASCLLASGSDDGTFSIHDLR 351 (358)
Q Consensus 299 g~I~iwD~r~~~~~~~~~~~h------------------~~~V~~i~~~-p~~~~~lasgs~Dg~i~iwDlr 351 (358)
+.|+.++. .+ .+.++.+. -.....|++. +++ .++++=..++.|+.+++.
T Consensus 365 ~~I~~~~~-~G--~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g-~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 365 HTVRVLTP-EG--RVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRK-CFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp TEEEEECT-TS--EEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTT-EEEEEEGGGTEEEEEEEC
T ss_pred CEEEEECC-CC--CEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCC-EEEEEeCCCCEEEEEecC
Confidence 89999985 22 33333221 1236789999 566 777776677888888764
No 282
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=95.69 E-value=0.12 Score=51.09 Aligned_cols=116 Identities=12% Similarity=0.055 Sum_probs=71.6
Q ss_pred eEEEEcC-CCCcEEEEEeCCC-----------cEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcC-CCCCeEEE
Q 018322 169 NRIRAMT-QNPHICASWADTG-----------HVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGG-HKDEGYAI 235 (358)
Q Consensus 169 ~~i~~~p-~~~~~lat~s~dg-----------~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l 235 (358)
..+++.+ .+ .+++.|+.+. .+.+||.... ....+..+.. +.....++
T Consensus 189 ~~~av~~~~g-~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~-------------------~w~~~~~~~~~~~~~~~~~ 248 (656)
T 1k3i_A 189 AAAAIEPTSG-RVLMWSSYRNDAFGGSPGGITLTSSWDPSTG-------------------IVSDRTVTVTKHDMFCPGI 248 (656)
T ss_dssp SEEEEETTTT-EEEEEEECCCTTTCSCCCSEEEEEEECTTTC-------------------CBCCCEEEECSCCCSSCEE
T ss_pred eeEEEEecCC-EEEEEecccccccccCCCCeEEEEEEeCCCC-------------------cEEeCcccCCCCCCccccc
Confidence 3556677 55 7888887543 5788888763 1233333322 22334457
Q ss_pred EeCCCCCCeEEEEeC-CCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEE-CC-----CcEEEEECCC
Q 018322 236 DWNPITTGRLVTGDC-NSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCS-VD-----GHIAIWDTRV 308 (358)
Q Consensus 236 ~~s~~~~~~l~sgs~-dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s-~D-----g~I~iwD~r~ 308 (358)
++..++. +++.|+. +..+.+||+.+ ..|.... .+.. ...-.+++..+++. +++.|+ .+ ..+.+||..+
T Consensus 249 ~~~~~g~-lyv~GG~~~~~v~~yd~~t-~~W~~~~-~~~~-~R~~~s~~~~~dg~-iyv~GG~~~~~~~~~~~e~yd~~t 323 (656)
T 1k3i_A 249 SMDGNGQ-IVVTGGNDAKKTSLYDSSS-DSWIPGP-DMQV-ARGYQSSATMSDGR-VFTIGGSWSGGVFEKNGEVYSPSS 323 (656)
T ss_dssp EECTTSC-EEEECSSSTTCEEEEEGGG-TEEEECC-CCSS-CCSSCEEEECTTSC-EEEECCCCCSSSCCCCEEEEETTT
T ss_pred cCCCCCC-EEEeCCCCCCceEEecCcC-CceeECC-CCCc-cccccceEEecCCe-EEEEeCcccCCcccccceEeCCCC
Confidence 7778887 8888874 55899999976 4555321 1211 11123455667787 888888 44 5799999987
Q ss_pred C
Q 018322 309 G 309 (358)
Q Consensus 309 ~ 309 (358)
.
T Consensus 324 ~ 324 (656)
T 1k3i_A 324 K 324 (656)
T ss_dssp T
T ss_pred C
Confidence 3
No 283
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.65 E-value=0.88 Score=40.60 Aligned_cols=108 Identities=13% Similarity=0.273 Sum_probs=62.3
Q ss_pred CCCCCeEEEEeCCCCCCeEEEEeCCCcEEE-EecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEE
Q 018322 227 GHKDEGYAIDWNPITTGRLVTGDCNSCIYL-WEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWD 305 (358)
Q Consensus 227 ~h~~~v~~l~~s~~~~~~l~sgs~dg~I~l-wd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD 305 (358)
.+...++++.+.+.+. +++.+. .|.|.. +|- .+..|... -......+..+.+.+++. ++ .++.+|.+++++
T Consensus 160 ~~~~~~~~~~~~~~~~-~~~~g~-~G~~~~S~d~-gG~tW~~~---~~~~~~~~~~~~~~~~g~-~~-~~~~~G~~~~s~ 231 (327)
T 2xbg_A 160 EAIGVMRNLNRSPSGE-YVAVSS-RGSFYSTWEP-GQTAWEPH---NRTTSRRLHNMGFTPDGR-LW-MIVNGGKIAFSD 231 (327)
T ss_dssp SCCCCEEEEEECTTSC-EEEEET-TSSEEEEECT-TCSSCEEE---ECCSSSCEEEEEECTTSC-EE-EEETTTEEEEEE
T ss_pred CCCcceEEEEEcCCCc-EEEEEC-CCcEEEEeCC-CCCceeEC---CCCCCCccceeEECCCCC-EE-EEeCCceEEEec
Confidence 3445788999999775 666554 555544 332 12334311 123456788999999886 44 556678887764
Q ss_pred CCCCCCeeEEEe----cCCCCeEEEEEeCCCCcEEEEEeCCCCE
Q 018322 306 TRVGKSALTSFK----AHNADVNVISWNRLASCLLASGSDDGTF 345 (358)
Q Consensus 306 ~r~~~~~~~~~~----~h~~~V~~i~~~p~~~~~lasgs~Dg~i 345 (358)
...+. .-..+. .+...+..|.+.+.+ .+++.+. +|.|
T Consensus 232 ~D~G~-tW~~~~~~~~~~~~~~~~v~~~~~~-~~~~~g~-~g~i 272 (327)
T 2xbg_A 232 PDNSE-NWGELLSPLRRNSVGFLDLAYRTPN-EVWLAGG-AGAL 272 (327)
T ss_dssp TTEEE-EECCCBCTTSSCCSCEEEEEESSSS-CEEEEES-TTCE
T ss_pred CCCCC-eeEeccCCcccCCcceEEEEecCCC-EEEEEeC-CCeE
Confidence 22111 101111 123358889998877 6666654 5666
No 284
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=95.52 E-value=1.3 Score=44.93 Aligned_cols=161 Identities=11% Similarity=-0.057 Sum_probs=97.6
Q ss_pred CCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCe
Q 018322 165 QGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGR 244 (358)
Q Consensus 165 ~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~ 244 (358)
......|++.+.+.+++++-...+.|.+.++... .....+........+|++.|.+. +
T Consensus 470 l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~---------------------~~~~l~~~~l~~P~gIaVDp~~g-~ 527 (791)
T 3m0c_C 470 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV---------------------KRKTLFRENGSKPRAIVVDPVHG-F 527 (791)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS---------------------SEEEEEECTTCCEEEEEEETTTT-E
T ss_pred CCCcceeeeeecCCcEEEEecCCCeEEEEeCCCC---------------------eEEEEEeCCCCCcceEEEecCCC-C
Confidence 3556778888777677777777788888888751 11122223334678999998764 5
Q ss_pred EEEEeC--CCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEec--CC
Q 018322 245 LVTGDC--NSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKA--HN 320 (358)
Q Consensus 245 l~sgs~--dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~--h~ 320 (358)
|+.... .+.|...++....... .+...-...+.|++++.+..++++-.....|..+++.... ....+.. .-
T Consensus 528 LYwtD~g~~~~I~~~~~dG~~~~~----lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~-~~~v~~~~~~l 602 (791)
T 3m0c_C 528 MYWTDWGTPAKIKKGGLNGVDIYS----LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRL 602 (791)
T ss_dssp EEEEECSSSCEEEEEETTSCCEEE----EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEEECTTTT
T ss_pred EEEecCCCCCeEEEEecCCCceEE----EEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCc-eEEEecCCCcc
Confidence 555543 2678888775322111 1122235688999998777566666667789999986532 2222222 12
Q ss_pred CCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 321 ADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 321 ~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
.....|++.. + +++++-...+.|...|..+++
T Consensus 603 ~~P~glav~~-~-~lYwtD~~~~~I~~~dk~tG~ 634 (791)
T 3m0c_C 603 AHPFSLAVFE-D-KVFWTDIINEAIFSANRLTGS 634 (791)
T ss_dssp SSEEEEEEET-T-EEEEEETTTTEEEEEETTTCC
T ss_pred CCCCEEEEeC-C-EEEEEECCCCEEEEEeCCCCc
Confidence 2344566532 2 566666667788888765553
No 285
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=95.51 E-value=0.057 Score=53.55 Aligned_cols=114 Identities=8% Similarity=0.025 Sum_probs=69.7
Q ss_pred EEEeCC-CCCCeEEEEeCCC-----------cEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEEC-CCc
Q 018322 234 AIDWNP-ITTGRLVTGDCNS-----------CIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSV-DGH 300 (358)
Q Consensus 234 ~l~~s~-~~~~~l~sgs~dg-----------~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~-Dg~ 300 (358)
+.++.+ .+. +++.|+.+. .+.+||+.+ +.|......-..+.....++++.+++. +++.|+. +..
T Consensus 190 ~~av~~~~g~-l~v~GG~~~~~~~~~~~~~~~~~~yd~~t-~~w~~~~~~~~~~~~~~~~~~~~~~g~-lyv~GG~~~~~ 266 (656)
T 1k3i_A 190 AAAIEPTSGR-VLMWSSYRNDAFGGSPGGITLTSSWDPST-GIVSDRTVTVTKHDMFCPGISMDGNGQ-IVVTGGNDAKK 266 (656)
T ss_dssp EEEEETTTTE-EEEEEECCCTTTCSCCCSEEEEEEECTTT-CCBCCCEEEECSCCCSSCEEEECTTSC-EEEECSSSTTC
T ss_pred eEEEEecCCE-EEEEecccccccccCCCCeEEEEEEeCCC-CcEEeCcccCCCCCCccccccCCCCCC-EEEeCCCCCCc
Confidence 556666 565 777776543 588999977 455421111111333344567788888 8888884 568
Q ss_pred EEEEECCCCCCeeEEE-ecCCC-CeEEEEEeCCCCcEEEEEe-CC-----CCEEEEeCCCC
Q 018322 301 IAIWDTRVGKSALTSF-KAHNA-DVNVISWNRLASCLLASGS-DD-----GTFSIHDLRLL 353 (358)
Q Consensus 301 I~iwD~r~~~~~~~~~-~~h~~-~V~~i~~~p~~~~~lasgs-~D-----g~i~iwDlr~~ 353 (358)
+.+||..+... ..+ ..+.. .-.++...+++ .+++.|+ .+ ..+.+||..+.
T Consensus 267 v~~yd~~t~~W--~~~~~~~~~R~~~s~~~~~dg-~iyv~GG~~~~~~~~~~~e~yd~~t~ 324 (656)
T 1k3i_A 267 TSLYDSSSDSW--IPGPDMQVARGYQSSATMSDG-RVFTIGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp EEEEEGGGTEE--EECCCCSSCCSSCEEEECTTS-CEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred eEEecCcCCce--eECCCCCccccccceEEecCC-eEEEEeCcccCCcccccceEeCCCCC
Confidence 99999986321 111 11111 12345566678 8888888 44 46899998764
No 286
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=95.44 E-value=1.3 Score=43.43 Aligned_cols=165 Identities=7% Similarity=-0.125 Sum_probs=98.6
Q ss_pred cCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCC
Q 018322 163 AHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITT 242 (358)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~ 242 (358)
...+....|.|.+.+..++.+=...+.|+.+++... ......+........+|++.+.+.
T Consensus 37 ~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~--------------------~~~~~v~~~~~~~P~GlAvD~~~~ 96 (619)
T 3s94_A 37 GGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKT--------------------ESVQNVVVSGLLSPDGLACDWLGE 96 (619)
T ss_dssp BCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-------------------------CEEEECSSCSCEEEEEEETTTT
T ss_pred cCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCC--------------------CceEEEEeCCCCCcCeEEEEecCC
Confidence 344567889999877567766566678888887651 111222322224566777777655
Q ss_pred CeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEEC-CCcEEEEECCCCCCeeEEEecCCC
Q 018322 243 GRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSV-DGHIAIWDTRVGKSALTSFKAHNA 321 (358)
Q Consensus 243 ~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~-Dg~I~iwD~r~~~~~~~~~~~h~~ 321 (358)
.++++-...+.|.+.++....... .+...-....+|++.|.+..++.+-.. .+.|...++... .....+...-.
T Consensus 97 ~ly~~d~~~~~I~v~~~dG~~~~~----l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~-~~~~l~~~~~~ 171 (619)
T 3s94_A 97 KLYWTDSETNRIEVSNLDGSLRKV----LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS-SRFIIINSEIY 171 (619)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEE----EECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSC-SCEEEECSSCS
T ss_pred EEEEEeCCCCEEEEEECCCCCEEE----EEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCC-ceEEEEeCCCC
Confidence 255555567899999986422111 111233456789999976646665422 456666666532 22222233345
Q ss_pred CeEEEEEeCCCCcEEEEEeCCCCEEEEeCCC
Q 018322 322 DVNVISWNRLASCLLASGSDDGTFSIHDLRL 352 (358)
Q Consensus 322 ~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~ 352 (358)
..+.|++.+.+..++.+=...+.|...|+..
T Consensus 172 ~P~Glald~~~~~LY~aD~~~~~I~~~~~dG 202 (619)
T 3s94_A 172 WPNGLTLDYEEQKLYWADAKLNFIHKSNLDG 202 (619)
T ss_dssp SEEEEEEETTTTEEEEEETTTCCEEEESSSC
T ss_pred CCcEEEEEccCCEEEEEeCCCCeEEEecCCC
Confidence 6799999997646666656677888888764
No 287
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=95.31 E-value=0.16 Score=50.50 Aligned_cols=55 Identities=15% Similarity=0.116 Sum_probs=38.6
Q ss_pred CCcEEEEECCCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCCC
Q 018322 298 DGHIAIWDTRVGKSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKV 355 (358)
Q Consensus 298 Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~~ 355 (358)
+|.|..||++++ +.+.++..+. .+....+...+ .+++.|+.||.|+.||.++++.
T Consensus 437 ~g~l~A~D~~tG-~~~W~~~~~~-~~~~~~~~t~g-g~vf~g~~dg~l~a~d~~tG~~ 491 (668)
T 1kv9_A 437 SGALLAWDPVKQ-KAAWKVPYPT-HWNGGTLSTAG-NLVFQGTAAGQMHAYSADKGEA 491 (668)
T ss_dssp EEEEEEEETTTT-EEEEEEEESS-SCCCCEEEETT-TEEEEECTTSEEEEEETTTCCE
T ss_pred cceEEEEeCCCC-cEEEEccCCC-CCcCceeEeCC-CEEEEECCcccchhhhhhcChh
Confidence 478999999986 4555554332 33333444455 6888899999999999998763
No 288
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=95.22 E-value=0.085 Score=52.84 Aligned_cols=155 Identities=10% Similarity=-0.060 Sum_probs=86.8
Q ss_pred eeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEE-cCCCCCeEEEEeCCCCCCeEE
Q 018322 168 VNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKF-GGHKDEGYAIDWNPITTGRLV 246 (358)
Q Consensus 168 V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~s~~~~~~l~ 246 (358)
...|++.+.+..++++-...+.|.++++.. ..+..+ ........+|++.|.+. +|+
T Consensus 455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg----------------------~~~~~l~~~~~~~P~giavDp~~g-~ly 511 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKG----------------------VKRKTLFREQGSKPRAIVVDPVHG-FMY 511 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSSS----------------------CCEEEECCCSSCCCCCEECCSSSS-CCE
T ss_pred cceEEEEeeCCcEEEEeccCCeEEEEecCC----------------------CceEEEEeCCCCCcceEEEccCCC-cEE
Confidence 345566644435555545566777777654 111222 11223456788888764 444
Q ss_pred EEeC--CCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEe--cCCCC
Q 018322 247 TGDC--NSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFK--AHNAD 322 (358)
Q Consensus 247 sgs~--dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~--~h~~~ 322 (358)
.+.. .+.|..+++....... .+...-...+.|+|+|.+..++++-+..+.|..+|+.... ....+. .....
T Consensus 512 ~td~~~~~~I~~~~~dG~~~~~----l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~-~~~~~~~~~~~~~ 586 (699)
T 1n7d_A 512 WTDWGTPAKIKKGGLNGVDIYS----LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAH 586 (699)
T ss_dssp ECCCSSSCCEEBCCSSSCCCCE----ESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSC-CEEECCCSSSCSS
T ss_pred EcccCCCCeEEEEeCCCCCeeE----EEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCc-eEEEEecCCcCCC
Confidence 4432 2678777764322111 0111223466799999877688888788899999986522 111111 11122
Q ss_pred eEEEEEeCCCCcEEEEEeCCCCEEEEeCCC
Q 018322 323 VNVISWNRLASCLLASGSDDGTFSIHDLRL 352 (358)
Q Consensus 323 V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~ 352 (358)
...|++..+ .++++....+.|..+|..+
T Consensus 587 P~glavd~~--~lywtd~~~~~V~~~d~~~ 614 (699)
T 1n7d_A 587 PFSLAVFED--KVFWTDIINEAIFSANRLT 614 (699)
T ss_dssp CCCCEEETT--EEEEECSTTTCEEEEETTT
T ss_pred ceEeEEECC--EEEEEeCCCCeEEEEEccC
Confidence 334555442 5666666778899888654
No 289
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=94.95 E-value=1.1 Score=41.71 Aligned_cols=159 Identities=12% Similarity=0.120 Sum_probs=90.0
Q ss_pred ceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCeEE
Q 018322 167 CVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLV 246 (358)
Q Consensus 167 ~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~l~ 246 (358)
..+.+.+.|.+..++++-...+.|+.|+...... ..+... +.......|+|+|++. +|+
T Consensus 227 ~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~-------------------~~~~~~-~~~~~P~gia~~pdG~-~ly 285 (430)
T 3tc9_A 227 NCNGAETHPINGELYFNSWNAGQVFRYDFTTQET-------------------TPLFTI-QDSGWEFHIQFHPSGN-YAY 285 (430)
T ss_dssp SCCCEEECTTTCCEEEEETTTTEEEEEETTTTEE-------------------EEEEEC-SSSSCCEEEEECTTSS-EEE
T ss_pred CceEEEEeCCCCEEEEEECCCCEEEEEECCCCcE-------------------EEEEEc-CCCCcceeEEEcCCCC-EEE
Confidence 4567788994337777777778899999865110 011111 1123467899999997 555
Q ss_pred EE-eCCCcEEEEecCCCCCcccCCCccccC---------------CCcEE-EEEEC--------CCCCCEEEEEECCCcE
Q 018322 247 TG-DCNSCIYLWEPASDATWNVDPNPFIGH---------------SASVE-DLQWS--------PTEPDVFASCSVDGHI 301 (358)
Q Consensus 247 sg-s~dg~I~lwd~~~~~~~~~~~~~~~~h---------------~~~V~-~v~~s--------p~~~~~las~s~Dg~I 301 (358)
.+ ...+.|..++.............+.+. -.... .+... +.+. ++++-...+.|
T Consensus 286 v~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~-lyvaD~~n~~I 364 (430)
T 3tc9_A 286 IVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYD-FYFCDRENHCI 364 (430)
T ss_dssp EEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEE-EEEEEGGGTEE
T ss_pred EEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCe-EEEEECCCcEE
Confidence 55 457789998875321100000111110 11122 34443 3344 66666667788
Q ss_pred EEEECCCCCCeeEEEecC------------------CCCeEEEEEeCC-CCcEEEEEeCCCCEEEEeCC
Q 018322 302 AIWDTRVGKSALTSFKAH------------------NADVNVISWNRL-ASCLLASGSDDGTFSIHDLR 351 (358)
Q Consensus 302 ~iwD~r~~~~~~~~~~~h------------------~~~V~~i~~~p~-~~~~lasgs~Dg~i~iwDlr 351 (358)
+.++. .+ .+..+.+. -.....|++.|+ + .++++-..++.|+.+++.
T Consensus 365 ~~i~~-~G--~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g-~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 365 RILTP-QG--RVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERE-CFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp EEECT-TS--EEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTT-EEEEEEGGGTEEEEEEEC
T ss_pred EEECC-CC--cEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCC-EEEEEECCCCeEEEEccC
Confidence 88873 22 23333221 114688999995 5 777776677888888753
No 290
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=94.95 E-value=1.9 Score=43.36 Aligned_cols=154 Identities=13% Similarity=0.002 Sum_probs=94.3
Q ss_pred CceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEc----------CCCCCeEEE
Q 018322 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG----------GHKDEGYAI 235 (358)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~h~~~v~~l 235 (358)
..|.++...+++ .|-.|+.++-|..|+..... ...+. .....|.++
T Consensus 313 ~~v~~i~~D~~g--~lWigt~~~Gl~~~~~~~~~----------------------~~~~~~~~~~~~~~~l~~~~v~~i 368 (781)
T 3v9f_A 313 ASARYIFQDSFN--NIWIGTWGGGINFISNAPPT----------------------FHTWSYSPTQMNESSLSNKVVSSV 368 (781)
T ss_dssp SCEEEEEECSSC--CEEEEEBSSCEEEECSSCCS----------------------CEEEC----CCCSSCCSSSCEEEE
T ss_pred CeEEEEEEeCCC--CEEEEecCCeEEEeCCCCCc----------------------ceeeccCccccccCCCCCcceEEE
Confidence 467888888777 34556666778888876421 11110 122468888
Q ss_pred EeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEE
Q 018322 236 DWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTS 315 (358)
Q Consensus 236 ~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~ 315 (358)
...+.+ .|..|+.++-|..|+..+. ...............|.++...+++. +. .|+.++-|..+|.+++ ....
T Consensus 369 ~~d~~g--~lWigt~~~Gl~~~~~~~~-~~~~~~~~~~~~~~~v~~i~~d~~g~-lW-igt~~~Gl~~~~~~~~--~~~~ 441 (781)
T 3v9f_A 369 CDDGQG--KLWIGTDGGGINVFENGKR-VAIYNKENRELLSNSVLCSLKDSEGN-LW-FGTYLGNISYYNTRLK--KFQI 441 (781)
T ss_dssp EECTTS--CEEEEEBSSCEEEEETTEE-EEECC-----CCCSBEEEEEECTTSC-EE-EEETTEEEEEECSSSC--EEEE
T ss_pred EEcCCC--CEEEEeCCCcEEEEECCCC-eEEEccCCCCCCCcceEEEEECCCCC-EE-EEeccCCEEEEcCCCC--cEEE
Confidence 887765 5677776677889987542 21100000112346799999888876 44 4677677889988763 2333
Q ss_pred Ee---cCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCC
Q 018322 316 FK---AHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLL 353 (358)
Q Consensus 316 ~~---~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~ 353 (358)
+. .....|.+|...+++ .+.+ |+. +-|.+||..+.
T Consensus 442 ~~~~~~~~~~v~~i~~d~~g-~lwi-gt~-~Gl~~~~~~~~ 479 (781)
T 3v9f_A 442 IELEKNELLDVRVFYEDKNK-KIWI-GTH-AGVFVIDLASK 479 (781)
T ss_dssp CCSTTTCCCCEEEEEECTTS-EEEE-EET-TEEEEEESSSS
T ss_pred eccCCCCCCeEEEEEECCCC-CEEE-EEC-CceEEEeCCCC
Confidence 32 134578999888877 4444 444 45888887654
No 291
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=94.59 E-value=3 Score=41.92 Aligned_cols=171 Identities=12% Similarity=0.003 Sum_probs=94.7
Q ss_pred CceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCeE
Q 018322 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRL 245 (358)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~l 245 (358)
..|++|...+++ .+..|+..+-|.+++.....-..-........ ..+.....-....|++|...+.+ .|
T Consensus 258 ~~i~~i~~d~~g--~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~-------~~~~~~~~l~~~~v~~i~~D~~g--~l 326 (781)
T 3v9f_A 258 SYIFSIKQLKDN--KLWIATELNGIMILDLQQNQFLLPEQIRFEFI-------REGDNNYSLSNASARYIFQDSFN--NI 326 (781)
T ss_dssp CCEEEEEECTTS--EEEEEESSSCEEEEETTCC---------CEEE-------CBCSSTTSBSSSCEEEEEECSSC--CE
T ss_pred ceEEEEEECCCC--CEEEEeCCCCeEEECCCCCeeeeeeccccccc-------cCCCCCCCCCCCeEEEEEEeCCC--CE
Confidence 568888887777 45556665668888876521100000000000 00000001123468888887766 57
Q ss_pred EEEeCCCcEEEEecCCCCCcccCCC-----ccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEE----
Q 018322 246 VTGDCNSCIYLWEPASDATWNVDPN-----PFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSF---- 316 (358)
Q Consensus 246 ~sgs~dg~I~lwd~~~~~~~~~~~~-----~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~---- 316 (358)
..|+.++-|..++.....-...... ...-....|.++...+++. +-.|+.++-|..||..+. ....+
T Consensus 327 Wigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~--lWigt~~~Gl~~~~~~~~--~~~~~~~~~ 402 (781)
T 3v9f_A 327 WIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK--LWIGTDGGGINVFENGKR--VAIYNKENR 402 (781)
T ss_dssp EEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC--EEEEEBSSCEEEEETTEE--EEECC----
T ss_pred EEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC--EEEEeCCCcEEEEECCCC--eEEEccCCC
Confidence 7777778889998765321110000 0111235699999888876 556676777888997652 11111
Q ss_pred ecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCC
Q 018322 317 KAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLL 353 (358)
Q Consensus 317 ~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~ 353 (358)
......|.++...+++ .+.+ |+.++-|..+|.++.
T Consensus 403 ~~~~~~v~~i~~d~~g-~lWi-gt~~~Gl~~~~~~~~ 437 (781)
T 3v9f_A 403 ELLSNSVLCSLKDSEG-NLWF-GTYLGNISYYNTRLK 437 (781)
T ss_dssp -CCCSBEEEEEECTTS-CEEE-EETTEEEEEECSSSC
T ss_pred CCCCcceEEEEECCCC-CEEE-EeccCCEEEEcCCCC
Confidence 1234568888888777 5444 555566888887543
No 292
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=94.35 E-value=4.3 Score=39.80 Aligned_cols=117 Identities=5% Similarity=-0.135 Sum_probs=67.7
Q ss_pred CeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEEC-CCcEEEEECCCC
Q 018322 231 EGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSV-DGHIAIWDTRVG 309 (358)
Q Consensus 231 ~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~-Dg~I~iwD~r~~ 309 (358)
...+|++...+..++++-+..+.|.+.++....... .+...-....+|++.|....++.+-.. .+.|...++...
T Consensus 393 ~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~----l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~ 468 (619)
T 3s94_A 393 HPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKI----LISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGS 468 (619)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE----EECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEE----EEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCC
Confidence 344555554444255555567889999886422111 111233567899999975535555432 356666666532
Q ss_pred CCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCC
Q 018322 310 KSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRL 352 (358)
Q Consensus 310 ~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~ 352 (358)
.........-...+.|++.+.+..++.+=+..+.|..+++..
T Consensus 469 -~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG 510 (619)
T 3s94_A 469 -DRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDG 510 (619)
T ss_dssp -SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSS
T ss_pred -ccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCC
Confidence 222222333456789999987635555555567788888754
No 293
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=94.30 E-value=2 Score=40.92 Aligned_cols=172 Identities=10% Similarity=0.041 Sum_probs=95.5
Q ss_pred ceeEEEEcCCCCcEEEEEeCCCcEEEEeCC-------CCcc-ccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeC
Q 018322 167 CVNRIRAMTQNPHICASWADTGHVQVWDLR-------SHLN-ALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWN 238 (358)
Q Consensus 167 ~V~~i~~~p~~~~~lat~s~dg~V~iwd~~-------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 238 (358)
..+.++++|.+..++++-..++.|+.+|+. .... ....... . .....+... +.....+.|+|+
T Consensus 248 ~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~---~-----g~~~~l~~~-~~~~~p~~ia~~ 318 (496)
T 3kya_A 248 QCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNN---P-----NTFKQLFTI-ADPSWEFQIFIH 318 (496)
T ss_dssp CCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGC---T-----TTEEEEEEC-SSSSCCEEEEEC
T ss_pred CceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccc---c-----cccceeEec-CCCCCceEEEEc
Confidence 346778899665788888888999999986 2110 0000000 0 000011112 223356799999
Q ss_pred CCCCCeEEEEe-CCCcEEEEecCCCCCcccCCCccccC---------------CCcEE-EEEEC-------CCCCCEEEE
Q 018322 239 PITTGRLVTGD-CNSCIYLWEPASDATWNVDPNPFIGH---------------SASVE-DLQWS-------PTEPDVFAS 294 (358)
Q Consensus 239 ~~~~~~l~sgs-~dg~I~lwd~~~~~~~~~~~~~~~~h---------------~~~V~-~v~~s-------p~~~~~las 294 (358)
|++. +|..++ ....|+.++.............+.+. -.... .+... +.+. ++++
T Consensus 319 p~G~-~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~-lyVa 396 (496)
T 3kya_A 319 PTGK-YAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYD-FYFV 396 (496)
T ss_dssp TTSS-EEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEE-EEEE
T ss_pred CCCC-EEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCe-EEEE
Confidence 9997 655554 56788887654321111000111111 11233 34443 3444 7777
Q ss_pred EECCCcEEEEECCCCCCeeEEEecC------------------------CCCeEEEEEeCC-CCcEEEEEeCCCCEEEEe
Q 018322 295 CSVDGHIAIWDTRVGKSALTSFKAH------------------------NADVNVISWNRL-ASCLLASGSDDGTFSIHD 349 (358)
Q Consensus 295 ~s~Dg~I~iwD~r~~~~~~~~~~~h------------------------~~~V~~i~~~p~-~~~~lasgs~Dg~i~iwD 349 (358)
-.....||.++. .+ .+.++-+. -.....|++.++ + .++++=..+..|+.++
T Consensus 397 D~~N~rIr~i~~-~G--~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g-~lyVaD~~N~rIrki~ 472 (496)
T 3kya_A 397 DRLNFCVRKVTP-EG--IVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKE-MFYVHDQVGHTIRTIS 472 (496)
T ss_dssp EGGGTEEEEECT-TC--BEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTT-EEEEEETTTTEEEEEE
T ss_pred ECCCCEEEEEeC-CC--CEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCC-EEEEEeCCCCEEEEEE
Confidence 777889999983 32 34444221 123578999996 6 6777766778999988
Q ss_pred CCCC
Q 018322 350 LRLL 353 (358)
Q Consensus 350 lr~~ 353 (358)
+...
T Consensus 473 ~~~~ 476 (496)
T 3kya_A 473 MEQE 476 (496)
T ss_dssp ECCC
T ss_pred CCCC
Confidence 7643
No 294
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=94.26 E-value=1.3 Score=41.13 Aligned_cols=106 Identities=12% Similarity=0.156 Sum_probs=69.3
Q ss_pred CCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccC----CCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCC---
Q 018322 239 PITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGH----SASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKS--- 311 (358)
Q Consensus 239 ~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h----~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~--- 311 (358)
.++. .++.+- ++.||.-++...... +.+..- -..|..+..+|+|. ++|..+ +..|.|..+..+..
T Consensus 30 ~n~t-~i~~a~-~n~iR~~~i~~~~~Y----k~L~~~~~i~f~~i~qlvlSpsG~-lLAl~g-~~~V~Vv~LP~~~~~~~ 101 (452)
T 3pbp_A 30 QNGT-RIVFIQ-DNIIRWYNVLTDSLY----HSLNFSRHLVLDDTFHVISSTSGD-LLCLFN-DNEIFVMEVPWGYSNVE 101 (452)
T ss_dssp TTTT-EEEEEE-TTEEEEEETTTCSSC----EEEECTTTCCCCTTCEEEECTTSS-EEEEEC-SSEEEEEECCTTCSCCC
T ss_pred cCCC-EEEEEE-CCEEEEEECCCCCcc----eEEecCcccccCceeEEEECCCCC-EEEEec-CCeEEEEEecCccccCc
Confidence 3444 555554 578888888643321 122111 22567799999998 666665 56899988874221
Q ss_pred --------eeEEEec------CCCCeEEEEEeCCCC--cEEEEEeCCCCEEEEeCCC
Q 018322 312 --------ALTSFKA------HNADVNVISWNRLAS--CLLASGSDDGTFSIHDLRL 352 (358)
Q Consensus 312 --------~~~~~~~------h~~~V~~i~~~p~~~--~~lasgs~Dg~i~iwDlr~ 352 (358)
....+.. ...+|..+.|+|.+. ..|++-..|++|++||+..
T Consensus 102 ~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 102 DVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp CHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred ccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence 1123322 256799999999763 3788888999999999986
No 295
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=94.21 E-value=0.7 Score=45.87 Aligned_cols=73 Identities=15% Similarity=0.219 Sum_probs=48.5
Q ss_pred EEEECCCCCCEEEEEECCC-------------------cEEEEECCCCCCeeEEEec--CC-------CCeEEEEEeCCC
Q 018322 281 DLQWSPTEPDVFASCSVDG-------------------HIAIWDTRVGKSALTSFKA--HN-------ADVNVISWNRLA 332 (358)
Q Consensus 281 ~v~~sp~~~~~las~s~Dg-------------------~I~iwD~r~~~~~~~~~~~--h~-------~~V~~i~~~p~~ 332 (358)
.+++.|... +++.++.++ .|..+|.++++ .+..+.. |. .++....+..++
T Consensus 234 ~~a~d~~~~-~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~-~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G 311 (668)
T 1kv9_A 234 SMAYDPELD-LLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGK-LAWHYQVTPGDSWDFTATQQITLAELNIDG 311 (668)
T ss_dssp CEEEETTTT-EEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCC-EEEEEESSTTCCSCCCCCSCEEEEEEEETT
T ss_pred ceEEcCCCC-EEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCc-eeeEeecCCCccccccCCCCcEEEEeccCC
Confidence 467788776 777777665 49999999864 5555543 22 222222333355
Q ss_pred C--cEEEEEeCCCCEEEEeCCCCCC
Q 018322 333 S--CLLASGSDDGTFSIHDLRLLKV 355 (358)
Q Consensus 333 ~--~~lasgs~Dg~i~iwDlr~~~~ 355 (358)
. ..|+.++.+|.++++|.++++.
T Consensus 312 ~~~~~v~~~~~~G~l~~lD~~tG~~ 336 (668)
T 1kv9_A 312 KPRKVLMQAPKNGFFYVLDRTNGKL 336 (668)
T ss_dssp EEEEEEEECCTTSEEEEEETTTCCE
T ss_pred cEEEEEEEECCCCEEEEEECCCCCE
Confidence 1 2688899999999999988763
No 296
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=94.14 E-value=2.2 Score=41.43 Aligned_cols=55 Identities=24% Similarity=0.235 Sum_probs=36.3
Q ss_pred CCcEEEEECCCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCCC
Q 018322 298 DGHIAIWDTRVGKSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKV 355 (358)
Q Consensus 298 Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~~ 355 (358)
+|.|..||+++++ .+.+..... .+..-.....+ .+++.|+.||.|+.||.++++.
T Consensus 465 ~G~l~A~D~~tG~-~~W~~~~~~-~~~~g~~~tag-glvf~g~~dg~l~A~D~~tG~~ 519 (582)
T 1flg_A 465 VGSLRAMDPVSGK-VVWEHKEHL-PLWAGVLATAG-NLVFTGTGDGYFKAFDAKSGKE 519 (582)
T ss_dssp SEEEEEECTTTCC-EEEEEEESS-CCCSCCEEETT-TEEEEECTTSEEEEEETTTCCE
T ss_pred cceEEEEECCCCC-EEEEecCCC-CCcccceEeCC-CEEEEECCCCcEEEEECCCCCE
Confidence 5889999999864 555553322 22211112234 5788899999999999998864
No 297
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=94.10 E-value=0.35 Score=47.12 Aligned_cols=83 Identities=11% Similarity=0.037 Sum_probs=44.3
Q ss_pred CCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEecCCC-CeEEEEEe
Q 018322 251 NSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNA-DVNVISWN 329 (358)
Q Consensus 251 dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~-~V~~i~~~ 329 (358)
+|.|..||+.++.. . ..+. +...+....+...+. +++.++.||.|+.||.+++ +.+.++..... .-.-+.+.
T Consensus 443 ~g~l~a~D~~tG~~-~---W~~~-~~~~~~~~~~~t~gg-~v~~g~~dg~l~a~D~~tG-~~lw~~~~~~~~~~~p~~~~ 515 (571)
T 2ad6_A 443 MGQIRAFDLTTGKA-K---WTKW-EKFAAWGGTLYTKGG-LVWYATLDGYLKALDNKDG-KELWNFKMPSGGIGSPMTYS 515 (571)
T ss_dssp CEEEEEECTTTCCE-E---EEEE-ESSCCCSBCEEETTT-EEEEECTTSEEEEEETTTC-CEEEEEECSSCCCSCCEEEE
T ss_pred CCeEEEEECCCCCE-E---EEec-CCCCccceeEEECCC-EEEEEcCCCeEEEEECCCC-CEEEEEeCCCCcEeeeEEEE
Confidence 57888888876432 1 1111 111111111222344 6667899999999999996 46666643322 11223455
Q ss_pred CCCCcEEEEEe
Q 018322 330 RLASCLLASGS 340 (358)
Q Consensus 330 p~~~~~lasgs 340 (358)
.++..++++.+
T Consensus 516 ~~G~~yv~~~~ 526 (571)
T 2ad6_A 516 FKGKQYIGSMY 526 (571)
T ss_dssp ETTEEEEEEEE
T ss_pred ECCEEEEEEEC
Confidence 67733444443
No 298
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=94.05 E-value=5 Score=39.41 Aligned_cols=158 Identities=6% Similarity=-0.064 Sum_probs=102.0
Q ss_pred CceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCeE
Q 018322 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRL 245 (358)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~l 245 (358)
.....|++.+.+.++..+-...+.|.+.++... .....+...-....+|+..|... .|
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~---------------------~~~~l~~~~l~~P~~iavdp~~G-~l 137 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQ---------------------HRQVLVWKDLDSPRALALDPAEG-FM 137 (628)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTST---------------------TCEEEECSSCCCEEEEEEETTTT-EE
T ss_pred CCcceEEEEeCCCEEEEEECCCCEEEEEecCCC---------------------cEEEEEeCCCCCcccEEEccCCC-eE
Confidence 456788888766577777777788999888651 11112223334678999998654 55
Q ss_pred EEEeC--CCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEecCCCCe
Q 018322 246 VTGDC--NSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADV 323 (358)
Q Consensus 246 ~sgs~--dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V 323 (358)
...+. .+.|...++..... ..+...-...+.|++++.+..++.+-...+.|..+|+..... ..+.......
T Consensus 138 Y~tD~g~~~~I~r~~~dG~~~-----~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~--~v~~~~l~~P 210 (628)
T 4a0p_A 138 YWTEWGGKPKIDRAAMDGSER-----TTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR--EVIADDLPHP 210 (628)
T ss_dssp EEEECSSSCEEEEEETTSCSC-----EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC--EEEEECCSCE
T ss_pred EEeCCCCCCEEEEEeCCCCce-----EEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce--EEeeccCCCc
Confidence 55552 46777777643222 112223456789999998775777777788999999976332 2233333445
Q ss_pred EEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 324 NVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 324 ~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
..|++.. + .++.|-...+.|...|..+++
T Consensus 211 ~glav~~-~-~ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 211 FGLTQYQ-D-YIYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp EEEEEET-T-EEEEEETTTTEEEEEETTTCC
T ss_pred eEEEEEC-C-EEEEecCCCCEEEEEECCCCC
Confidence 6777765 4 677776677889999876654
No 299
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=93.91 E-value=1.9 Score=41.81 Aligned_cols=55 Identities=20% Similarity=0.016 Sum_probs=36.4
Q ss_pred CCcEEEEECCCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCCC
Q 018322 298 DGHIAIWDTRVGKSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKV 355 (358)
Q Consensus 298 Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~~ 355 (358)
+|.|..||+.+++ .+.++... ..+....+...+ .+++.++.||.|+.||.++++.
T Consensus 443 ~g~l~a~D~~tG~-~~W~~~~~-~~~~~~~~~t~g-g~v~~g~~dg~l~a~D~~tG~~ 497 (571)
T 2ad6_A 443 MGQIRAFDLTTGK-AKWTKWEK-FAAWGGTLYTKG-GLVWYATLDGYLKALDNKDGKE 497 (571)
T ss_dssp CEEEEEECTTTCC-EEEEEEES-SCCCSBCEEETT-TEEEEECTTSEEEEEETTTCCE
T ss_pred CCeEEEEECCCCC-EEEEecCC-CCccceeEEECC-CEEEEEcCCCeEEEEECCCCCE
Confidence 5789999999864 55555322 222222233334 4677789999999999998764
No 300
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=93.84 E-value=2.2 Score=35.95 Aligned_cols=163 Identities=10% Similarity=0.064 Sum_probs=85.2
Q ss_pred EEecC--CCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCcc-ccccccccccCCCCCCCCCCCcEEEcCCC--CCeEE
Q 018322 160 RKVAH--QGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLN-ALAESETIVGQGAPQVSNQSPLVKFGGHK--DEGYA 234 (358)
Q Consensus 160 ~~~~H--~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~h~--~~v~~ 234 (358)
+.+++ -..+..+.|+|++ .+.|+ .+|.++-.+..+... ..- .....+ +.. ....+
T Consensus 33 ~~iG~~gw~~~~~laf~P~G-~LYaV--~~G~Ly~~~~~t~~~~~W~----------------~s~t~I-G~~Gw~~F~a 92 (236)
T 1tl2_A 33 TLIGKGGWSNFKFLFLSPGG-ELYGV--LNDKIYKGTPPTHDNDNWM----------------GRAKKI-GNGGWNQFQF 92 (236)
T ss_dssp EEEESSSCTTCSEEEECTTS-CEEEE--ETTEEEEESCCCSTTCCHH----------------HHCEEE-ECSCGGGCSE
T ss_pred cccCccccccceeEEECCCc-cEEEE--eCCeEEEECCCCCCccccc----------------ccccEe-cccccccceE
Confidence 34444 2578899999977 67776 667665555432100 000 001111 111 12458
Q ss_pred EEeCCCCCCeEEEEeCCCcEEEEecCCC--CCcccCCCccc-cCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCC
Q 018322 235 IDWNPITTGRLVTGDCNSCIYLWEPASD--ATWNVDPNPFI-GHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKS 311 (358)
Q Consensus 235 l~~s~~~~~~l~sgs~dg~I~lwd~~~~--~~~~~~~~~~~-~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~ 311 (358)
+-|.|++. +.++ .||.|+-++..+. ..|.-....+- +--..+..|.+.|++. +.|.. |+.++-+-..+...
T Consensus 93 ~~fD~~G~-LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~-Lyav~--dg~lyr~~~P~~~~ 166 (236)
T 1tl2_A 93 LFFDPNGY-LYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGY-LYAVH--GQQFYKALPPVSNQ 166 (236)
T ss_dssp EEECTTSC-EEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSC-EEEEE--TTEEEEECCCSSTT
T ss_pred EEECCCCC-EEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCce-EEEEe--CCcEEecCCCCCCC
Confidence 88999886 5555 4699988886332 22321111110 1114679999999997 55544 77754332221110
Q ss_pred -----eeEEEe-cCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCC
Q 018322 312 -----ALTSFK-AHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLL 353 (358)
Q Consensus 312 -----~~~~~~-~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~ 353 (358)
....+. ..-..-.-+.|.+++ .+.+.- +| +||-....
T Consensus 167 ~~wl~~~~~~g~~g~~~yr~l~f~~~G-~l~~v~--~g--~~Y~~~~p 209 (236)
T 1tl2_A 167 DNWLARATKIGQGGWDTFKFLFFSSVG-TLFGVQ--GG--KFYEDYPP 209 (236)
T ss_dssp CCHHHHCEEEESSSGGGEEEEEECTTS-CEEEEE--TT--EEEEESCC
T ss_pred cccccccceeccCCcceEEEEEECCCC-cEEEEe--CC--eEEecCCc
Confidence 111221 222234556799988 666655 66 44544444
No 301
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=93.58 E-value=0.43 Score=46.60 Aligned_cols=81 Identities=17% Similarity=0.275 Sum_probs=45.9
Q ss_pred CCcEEEEecCCCCC-cccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEecCCCCe-EEEEE
Q 018322 251 NSCIYLWEPASDAT-WNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADV-NVISW 328 (358)
Q Consensus 251 dg~I~lwd~~~~~~-~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V-~~i~~ 328 (358)
.|.|..||+.++.. |. +... ..+..-.....+. +++.++.||.++.||.+++ +.+.++......+ .-+.|
T Consensus 465 ~G~l~A~D~~tG~~~W~-----~~~~-~~~~~g~~~tagg-lvf~g~~dg~l~A~D~~tG-~~lW~~~~~~g~~a~P~~y 536 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWE-----HKEH-LPLWAGVLATAGN-LVFTGTGDGYFKAFDAKSG-KELWKFQTGSGIVSPPITW 536 (582)
T ss_dssp SEEEEEECTTTCCEEEE-----EEES-SCCCSCCEEETTT-EEEEECTTSEEEEEETTTC-CEEEEEECSSCCCSCCEEE
T ss_pred cceEEEEECCCCCEEEE-----ecCC-CCCcccceEeCCC-EEEEECCCCcEEEEECCCC-CEEEEecCCCCcccCceEE
Confidence 57888899877432 22 1111 1111101111244 6777999999999999996 4666665433221 23567
Q ss_pred eCCCCcEEEEE
Q 018322 329 NRLASCLLASG 339 (358)
Q Consensus 329 ~p~~~~~lasg 339 (358)
..++..++++.
T Consensus 537 ~~~G~qYv~~~ 547 (582)
T 1flg_A 537 EQDGEQYLGVT 547 (582)
T ss_dssp EETTEEEEEEE
T ss_pred EECCEEEEEEE
Confidence 67774455544
No 302
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=92.99 E-value=3.7 Score=40.09 Aligned_cols=55 Identities=16% Similarity=0.048 Sum_probs=34.8
Q ss_pred CCcEEEEECCCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCCC
Q 018322 298 DGHIAIWDTRVGKSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKV 355 (358)
Q Consensus 298 Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~~ 355 (358)
.|.|..||+++++ .+.+... ...+..-.....+ .+++.|+.||.|+.||.++++.
T Consensus 452 ~G~l~A~D~~tG~-~~W~~~~-~~~~~~g~~~tag-g~vf~gt~dg~l~A~D~~tG~~ 506 (599)
T 1w6s_A 452 LGQIKAYNAITGD-YKWEKME-RFAVWGGTMATAG-DLVFYGTLDGYLKARDSDTGDL 506 (599)
T ss_dssp CEEEEEECTTTCC-EEEEEEE-SSCCCSBCEEETT-TEEEEECTTSEEEEEETTTCCE
T ss_pred cCeEEEEECCCCC-EEeEecC-CCCccCcceEecC-CEEEEECCCCeEEEEECCCCCE
Confidence 4788899998864 4444432 1122111122234 5777799999999999998764
No 303
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=92.51 E-value=3 Score=37.68 Aligned_cols=151 Identities=9% Similarity=0.046 Sum_probs=78.3
Q ss_pred CCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCC---C
Q 018322 165 QGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPI---T 241 (358)
Q Consensus 165 ~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~---~ 241 (358)
-..-..|.|.|++ .++++ ...|.|++++.... ..+. ..+ .+.........|+++|+ +
T Consensus 28 l~~P~~ia~~pdG-~l~V~-e~~g~I~~~d~~G~-~~~~---------------~~~--v~~~g~~g~~gia~~pdf~~~ 87 (354)
T 3a9g_A 28 LEVPWSIAPLGGG-RYLVT-ERPGRLVLISPSGK-KLVA---------------SFD--VANVGEAGLLGLALHPEFPKK 87 (354)
T ss_dssp CSCEEEEEEEETT-EEEEE-ETTTEEEEECSSCE-EEEE---------------ECC--CCCSTTCSEEEEEECTTTTTS
T ss_pred CCCCeEEEEcCCC-eEEEE-eCCCEEEEEeCCCc-eEee---------------ccc--eeecCCCceeeEEeCCCCCcC
Confidence 4567899999998 55555 55699998873221 0000 000 11122346789999997 4
Q ss_pred CCeEEEEeC----C----CcEEEEecCCCC-Cc---ccCCCccc-cCCCcEEEEEECCCCCCEEEEEECC----------
Q 018322 242 TGRLVTGDC----N----SCIYLWEPASDA-TW---NVDPNPFI-GHSASVEDLQWSPTEPDVFASCSVD---------- 298 (358)
Q Consensus 242 ~~~l~sgs~----d----g~I~lwd~~~~~-~~---~~~~~~~~-~h~~~V~~v~~sp~~~~~las~s~D---------- 298 (358)
. .|..+.. + ..|..|+..... .. ......+. ........|.|.|++. ++++.+..
T Consensus 88 g-~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~-Lyvt~G~~~~~~~~~d~~ 165 (354)
T 3a9g_A 88 S-WVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGM-LYITTGDAADPRLAQDLS 165 (354)
T ss_dssp C-EEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSC-EEEECCCTTCGGGGTCTT
T ss_pred C-EEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCc-EEEEECCCCCCccccCCC
Confidence 3 5544433 2 567777765421 10 00001111 1111246789999997 76665432
Q ss_pred ---CcEEEEECCCCC-------CeeEEEecCCCCeEEEEEeC-CCCcEEEEE
Q 018322 299 ---GHIAIWDTRVGK-------SALTSFKAHNADVNVISWNR-LASCLLASG 339 (358)
Q Consensus 299 ---g~I~iwD~r~~~-------~~~~~~~~h~~~V~~i~~~p-~~~~~lasg 339 (358)
|.|.-++....- .......+|.. .+.|+|+| .+ .++++-
T Consensus 166 ~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~rn-p~Gla~d~~~g-~l~v~d 215 (354)
T 3a9g_A 166 SLAGKILRVDEEGRPPADNPFPNSPIWSYGHRN-PQGIDWHRASG-VMVATE 215 (354)
T ss_dssp CCSSEEEEECTTSCCCTTSSSTTCCEEEECCSC-CCEEEECTTTC-CEEEEE
T ss_pred CCCeEEEEEcCCCCCCCCCCCCCCcEEEEccCC-cceEEEeCCCC-CEEEEe
Confidence 445555543210 01111123333 56799999 56 666553
No 304
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=92.31 E-value=6 Score=35.47 Aligned_cols=159 Identities=16% Similarity=0.181 Sum_probs=94.8
Q ss_pred CceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCC----CCeEEEEeCCCC
Q 018322 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHK----DEGYAIDWNPIT 241 (358)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~----~~v~~l~~s~~~ 241 (358)
..|.-=+|-... .|+-.+. ..|+-|++.. ...|+..|..|. ..|....-+++.
T Consensus 107 e~VvfWkWis~~--~L~lVT~-taVyHWs~~~--------------------~s~P~kvFdR~~~L~~~QIInY~~d~~~ 163 (365)
T 2xzh_A 107 DDVTFWKWISLN--TVALVTD-NAVYHWSMEG--------------------ESQPVKMFDRHSSLAGCQIINYRTDAKQ 163 (365)
T ss_dssp SCEEEEEECSSS--EEEEEES-SEEEEEESST--------------------TCCCEEEEECCGGGTTCEEEEEEECTTS
T ss_pred CccEEEEecCCC--eEEEEcC-CcEEEEcccC--------------------CCCCceeeecchhcccceEEEEEECCCC
Confidence 344444454433 4444443 4688888765 246777776664 356666777777
Q ss_pred CCeEEEEe-------CCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCC--CCCEEEEEECC---CcEEEEECCCC
Q 018322 242 TGRLVTGD-------CNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPT--EPDVFASCSVD---GHIAIWDTRVG 309 (358)
Q Consensus 242 ~~~l~sgs-------~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~--~~~~las~s~D---g~I~iwD~r~~ 309 (358)
. +++..+ -.|.+.||.....- .+.+.||.+....+...-+ ...+|+.+... +.++|-++...
T Consensus 164 k-W~~l~GI~~~~~~v~G~mQLYS~er~~-----sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~ 237 (365)
T 2xzh_A 164 K-WLLLTGISAQQNRVVGAMQLYSVDRKV-----SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTP 237 (365)
T ss_dssp C-EEEEEEEEEETTEEEEEEEEEETTTTE-----EEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSC
T ss_pred C-EEEEEeEeccCCccceeEEEEeecccc-----cceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCC
Confidence 6 544332 23788899886522 2567788777665554322 12255555442 58999998543
Q ss_pred ---CCe----eEEE----ecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 310 ---KSA----LTSF----KAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 310 ---~~~----~~~~----~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
..+ ...+ .+-.+---++..++.. .++..-..-|.|++||+.++.
T Consensus 238 ~~~~~~f~kk~vdi~fppea~~DFPVamqvs~ky-gviyviTK~G~ihlyDleTgt 292 (365)
T 2xzh_A 238 PTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKH-DVVFLITKYGYIHLYDLETGT 292 (365)
T ss_dssp CTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTT-TEEEEEETTSEEEEEETTTCC
T ss_pred CCCCCCcccccceeeCCccccCCceEEEEecccC-CEEEEEeCCcEEEEEEcccCc
Confidence 111 1111 1123344567788766 577777888999999999875
No 305
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=92.10 E-value=1.4 Score=39.89 Aligned_cols=107 Identities=12% Similarity=0.135 Sum_probs=62.4
Q ss_pred CCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCc-ccCCCccccCCCcEEEEEECCC---CCCEEEEEECC-----C
Q 018322 229 KDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATW-NVDPNPFIGHSASVEDLQWSPT---EPDVFASCSVD-----G 299 (358)
Q Consensus 229 ~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~-~~~~~~~~~h~~~V~~v~~sp~---~~~~las~s~D-----g 299 (358)
-...++|+|.|++. |+++...|.|.+++ .+... ......+.........|+|+|+ +..++++-... .
T Consensus 30 l~~P~~ia~~pdG~--l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~ 105 (352)
T 2ism_A 30 LEVPWALAFLPDGG--MLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRN 105 (352)
T ss_dssp CSCEEEEEECTTSC--EEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEE
T ss_pred CCCceEEEEcCCCe--EEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCcc
Confidence 34677999999986 45556679999998 22111 1001111222356889999998 44366655543 5
Q ss_pred cEEEEECCCCC----CeeEE-Ee---cCCCCeEEEEEeCCCCcEEEEEe
Q 018322 300 HIAIWDTRVGK----SALTS-FK---AHNADVNVISWNRLASCLLASGS 340 (358)
Q Consensus 300 ~I~iwD~r~~~----~~~~~-~~---~h~~~V~~i~~~p~~~~~lasgs 340 (358)
.|..|+..... ..+.. +. ......+.|+|.|+| .++++-+
T Consensus 106 ~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~G 153 (352)
T 2ism_A 106 QVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDG-MLYVTTG 153 (352)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTS-CEEEECC
T ss_pred EEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCC-CEEEEEC
Confidence 67777776321 11211 22 111234689999999 7776644
No 306
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=91.74 E-value=8.5 Score=35.96 Aligned_cols=158 Identities=15% Similarity=0.175 Sum_probs=97.7
Q ss_pred ceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCC----CCeEEEEeCCCCC
Q 018322 167 CVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHK----DEGYAIDWNPITT 242 (358)
Q Consensus 167 ~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~----~~v~~l~~s~~~~ 242 (358)
.|.-=+|-... .|+-.+. ..|+-|++.. ...|+..|..|. ..|....-+++..
T Consensus 107 ~VvfWkWis~~--~l~lVT~-taVyHWsi~~--------------------~s~P~kvFdR~~~L~~~QIInY~~d~~~k 163 (494)
T 1bpo_A 107 DVTFWKWISLN--TVALVTD-NAVYHWSMEG--------------------ESQPVKMFDRHSSLAGCQIINYRTDAKQK 163 (494)
T ss_dssp CCCEEEEEETT--EEEEECS-SEEEEEESSS--------------------SCCCEEEEECCGGGTTCEEEEEEECTTSS
T ss_pred CceEEEecCCC--eEEEEcC-CeeEEecccC--------------------CCCchhheecchhcccceEEEEEECCCCC
Confidence 34444443333 4444443 4688888865 246777776664 3566677777776
Q ss_pred CeEEEEe-------CCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCC--CCEEEEEECC---CcEEEEECCCC-
Q 018322 243 GRLVTGD-------CNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTE--PDVFASCSVD---GHIAIWDTRVG- 309 (358)
Q Consensus 243 ~~l~sgs-------~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~--~~~las~s~D---g~I~iwD~r~~- 309 (358)
+++..+ -.|.+.||.....- .+.+.||.+....+...-+. ..+|+.+... +.++|.++...
T Consensus 164 -W~~l~GI~~~~~~v~G~mQLYS~er~~-----sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~ 237 (494)
T 1bpo_A 164 -WLLLTGISAQQNRVVGAMQLYSVDRKV-----SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPP 237 (494)
T ss_dssp -EEEEEEEEEETTEEEEEEEEEESTTCC-----EEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCC
T ss_pred -eEEEEeecccCCcccceEEEeeccccc-----cchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCc
Confidence 554322 24788899986532 25678888777766654221 2356666654 78999998653
Q ss_pred --CCe----eEEE----ecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 310 --KSA----LTSF----KAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 310 --~~~----~~~~----~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
..+ ...+ .+-..---++..++.. .++..-..-|.|++||+.++.
T Consensus 238 ~~~~~f~kk~vdv~fppe~~~DFPvamqvs~ky-gviyviTK~G~i~lyDleTgt 291 (494)
T 1bpo_A 238 TGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKH-DVVFLITKYGYIHLYDLETGT 291 (494)
T ss_dssp TTCCCCCCEEEECCCCTTSTTCCEEEEEEETTT-TEEEEEETTSEEEEEETTTCC
T ss_pred cCCCCccceeeeeeCCcccccCceeEEEecccC-CEEEEEecCceEEEEecccce
Confidence 111 1111 1223345677888877 677777888999999999874
No 307
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=91.68 E-value=0.58 Score=39.50 Aligned_cols=105 Identities=14% Similarity=0.116 Sum_probs=60.8
Q ss_pred CeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCC--cccCCCccc---cCCCcEEEEEECCCCCCEEEEEECCCcEEEEE
Q 018322 231 EGYAIDWNPITTGRLVTGDCNSCIYLWEPASDAT--WNVDPNPFI---GHSASVEDLQWSPTEPDVFASCSVDGHIAIWD 305 (358)
Q Consensus 231 ~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~--~~~~~~~~~---~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD 305 (358)
.+..|+|+|++. +.++ .+|.++-.+..+... |.-. .+.. +-+ ...++.|.|++. +.++ .||.|+-++
T Consensus 42 ~~~~laf~P~G~-LYaV--~~G~Ly~~~~~t~~~~~W~~s-~t~IG~~Gw~-~F~a~~fD~~G~-LYav--~dG~iyr~~ 113 (236)
T 1tl2_A 42 NFKFLFLSPGGE-LYGV--LNDKIYKGTPPTHDNDNWMGR-AKKIGNGGWN-QFQFLFFDPNGY-LYAV--SKDKLYKAS 113 (236)
T ss_dssp TCSEEEECTTSC-EEEE--ETTEEEEESCCCSTTCCHHHH-CEEEECSCGG-GCSEEEECTTSC-EEEE--ETTEEEEES
T ss_pred cceeEEECCCcc-EEEE--eCCeEEEECCCCCCccccccc-ccEecccccc-cceEEEECCCCC-EEEe--CCCEEEEeC
Confidence 667999999775 4444 577766555533111 1110 0111 111 147889999997 6555 569998777
Q ss_pred CCCCCC-----eeEEE-ecCCCCeEEEEEeCCCCcEEEEEeCCCCEE
Q 018322 306 TRVGKS-----ALTSF-KAHNADVNVISWNRLASCLLASGSDDGTFS 346 (358)
Q Consensus 306 ~r~~~~-----~~~~~-~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~ 346 (358)
..+... ....+ ..-=..+..|.|.|+| .+.+.. |+.+.
T Consensus 114 pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G-~Lyav~--dg~ly 157 (236)
T 1tl2_A 114 PPQSDTDNWIARATEVGSGGWSGFKFLFFHPNG-YLYAVH--GQQFY 157 (236)
T ss_dssp CCCSTTCCHHHHSEEEECSSGGGEEEEEECTTS-CEEEEE--TTEEE
T ss_pred CCcCCCCceeccccEeccCCCCceEEEEECCCc-eEEEEe--CCcEE
Confidence 543211 11112 1111468999999999 676666 67643
No 308
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=91.67 E-value=15 Score=39.67 Aligned_cols=158 Identities=18% Similarity=0.224 Sum_probs=90.1
Q ss_pred ceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCC----CCCeEEEEeCCCCC
Q 018322 167 CVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGH----KDEGYAIDWNPITT 242 (358)
Q Consensus 167 ~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h----~~~v~~l~~s~~~~ 242 (358)
.|.-=+|-... .|+-.+. ..|+-|++.. ...|+..|..| ...|..-.-+++..
T Consensus 107 ~VvfWkWis~~--~l~lVT~-~aVyHW~~~~--------------------~s~P~k~fdR~~~L~~~QIinY~~d~~~k 163 (1630)
T 1xi4_A 107 DVTFWKWISLN--TVALVTD-NAVYHWSMEG--------------------ESQPVKMFDRHSSLAGCQIINYRTDAKQK 163 (1630)
T ss_pred CceEEEecCCC--eeEEEcC-CeEEEeccCC--------------------CCccHHHHhcchhcccCeeEEeeeCCCCC
Confidence 34433444333 3444333 4688898865 13455555444 23565666666665
Q ss_pred CeEE-EE------eCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEEC--CCCCCEEEEEEC---CCcEEEEECCCC-
Q 018322 243 GRLV-TG------DCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWS--PTEPDVFASCSV---DGHIAIWDTRVG- 309 (358)
Q Consensus 243 ~~l~-sg------s~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~s--p~~~~~las~s~---Dg~I~iwD~r~~- 309 (358)
+++ +| .-.|.+.||...... .+.+.||.+....+... +....+|+.+.. .+.++|-++..+
T Consensus 164 -W~~l~gi~~~~~~v~G~mQLyS~er~~-----sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~ 237 (1630)
T 1xi4_A 164 -WLLLTGISAQQNRVVGAMQLYSVDRKV-----SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPP 237 (1630)
T ss_pred -eEEEEeeccCCCcccceeeeeeccccc-----chhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCc
Confidence 544 33 245889999886532 25677887777666553 222235554443 378999998553
Q ss_pred --CCee-----EE-E--ecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 310 --KSAL-----TS-F--KAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 310 --~~~~-----~~-~--~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
..+. -. + .+-..-..++..++.. .++..-..-|.|+++|+.++.
T Consensus 238 ~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~-g~iy~itk~G~~~~~d~~t~~ 291 (1630)
T 1xi4_A 238 TGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKH-DVVFLITKYGYIHLYDLETGT 291 (1630)
T ss_pred cCCCCCccccccccCCcccccCcceEEEecccc-CEEEEEecCceEEEEecccch
Confidence 1111 00 1 1112333456677665 566677788999999998864
No 309
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=91.54 E-value=9 Score=35.85 Aligned_cols=111 Identities=9% Similarity=0.029 Sum_probs=58.9
Q ss_pred CCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEc------CCCCCeEEEEeC
Q 018322 165 QGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFG------GHKDEGYAIDWN 238 (358)
Q Consensus 165 ~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~h~~~v~~l~~s 238 (358)
-..-+.|+|.|++ .++++-...+.|++++..... ...+..+. ........|+|+
T Consensus 26 l~~P~~~a~~pdG-~l~V~e~~gg~I~~~~~~~g~-------------------~~~~~~~~~~~~~~~g~~Gllgia~~ 85 (454)
T 1cru_A 26 LNKPHALLWGPDN-QIWLTERATGKILRVNPESGS-------------------VKTVFQVPEIVNDADGQNGLLGFAFH 85 (454)
T ss_dssp CSSEEEEEECTTS-CEEEEETTTCEEEEECTTTCC-------------------EEEEEECTTCCCCTTSSCSEEEEEEC
T ss_pred CCCceEEEEcCCC-cEEEEEcCCCEEEEEECCCCc-------------------EeEEecCCccccccCCCCceeEEEEC
Confidence 4566799999999 677764443468888754210 01111111 123467799999
Q ss_pred CC---CCCeEEEEeC-------------CCcEEEEecCCCC-Cc---ccCCCccc-cCCCcEEEEEECCCCCCEEEEEEC
Q 018322 239 PI---TTGRLVTGDC-------------NSCIYLWEPASDA-TW---NVDPNPFI-GHSASVEDLQWSPTEPDVFASCSV 297 (358)
Q Consensus 239 ~~---~~~~l~sgs~-------------dg~I~lwd~~~~~-~~---~~~~~~~~-~h~~~V~~v~~sp~~~~~las~s~ 297 (358)
|+ +. .|..+.. ...|.-|++.... .. .+....+. ........|.|.|++. ++++.+.
T Consensus 86 Pdf~~~g-~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~-Lyv~~Gd 163 (454)
T 1cru_A 86 PDFKNNP-YIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQK-IYYTIGD 163 (454)
T ss_dssp TTTTTSC-EEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSC-EEEEECC
T ss_pred CCcCcCC-EEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCe-EEEEECC
Confidence 95 33 4444332 2355555553321 10 00001111 1112468899999998 7766554
No 310
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=90.99 E-value=2.3 Score=38.43 Aligned_cols=108 Identities=12% Similarity=0.005 Sum_probs=61.8
Q ss_pred CCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCC---CCCEEEEEEC---C----
Q 018322 229 KDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPT---EPDVFASCSV---D---- 298 (358)
Q Consensus 229 ~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~---~~~~las~s~---D---- 298 (358)
-...++|+|.|++. |+++...|.|++++. .+.........+.........|+|+|+ +..++++-+. +
T Consensus 28 l~~P~~ia~~pdG~--l~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~ 104 (354)
T 3a9g_A 28 LEVPWSIAPLGGGR--YLVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIR 104 (354)
T ss_dssp CSCEEEEEEEETTE--EEEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEE
T ss_pred CCCCeEEEEcCCCe--EEEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcc
Confidence 34678999999874 666667799999973 322111101111122356889999997 4436555543 3
Q ss_pred CcEEEEECCCCC------CeeEE-Ee-cCCCCeEEEEEeCCCCcEEEEEe
Q 018322 299 GHIAIWDTRVGK------SALTS-FK-AHNADVNVISWNRLASCLLASGS 340 (358)
Q Consensus 299 g~I~iwD~r~~~------~~~~~-~~-~h~~~V~~i~~~p~~~~~lasgs 340 (358)
..|..|+..... ..+.. +. ......+.|+|.|++ .++++-+
T Consensus 105 ~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG-~Lyvt~G 153 (354)
T 3a9g_A 105 NRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDG-MLYITTG 153 (354)
T ss_dssp EEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTS-CEEEECC
T ss_pred eEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCC-cEEEEEC
Confidence 567777765421 11111 22 111234679999999 7776644
No 311
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=90.90 E-value=5.3 Score=35.92 Aligned_cols=110 Identities=10% Similarity=0.100 Sum_probs=61.5
Q ss_pred CCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCC-cccCC-CccccCCCcEEEEEECCC---CCCEEEEEEC-------
Q 018322 230 DEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDAT-WNVDP-NPFIGHSASVEDLQWSPT---EPDVFASCSV------- 297 (358)
Q Consensus 230 ~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~-~~~~~-~~~~~h~~~V~~v~~sp~---~~~~las~s~------- 297 (358)
...++|+|.|++. .|+++...|.|++++...... ..... ..+.........|+|+|+ +..++++-+.
T Consensus 18 ~~P~~i~~~pdG~-~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 18 DHPWALAFLPDNH-GMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SSEEEEEECSTTC-CEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCcEEEEEcCCCC-EEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 3567999999985 477778889999998532100 01000 111122345789999996 4436655443
Q ss_pred CCcEEEEECCCCCC------eeEE-Ee---cCCCCeEEEEEeCCCCcEEEEEeC
Q 018322 298 DGHIAIWDTRVGKS------ALTS-FK---AHNADVNVISWNRLASCLLASGSD 341 (358)
Q Consensus 298 Dg~I~iwD~r~~~~------~~~~-~~---~h~~~V~~i~~~p~~~~~lasgs~ 341 (358)
...|..|++..... .+.. +. .....-..|.|.|++ .++++-++
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~Gd 149 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKG-YLFIALGE 149 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSS-EEEEEECC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCC-cEEEEECC
Confidence 23566666543211 1111 11 111124679999999 77666544
No 312
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=90.88 E-value=4.9 Score=36.38 Aligned_cols=100 Identities=14% Similarity=0.079 Sum_probs=62.5
Q ss_pred CeEEEEeCCCCCCeEEEEe-----------------CCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEE
Q 018322 231 EGYAIDWNPITTGRLVTGD-----------------CNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFA 293 (358)
Q Consensus 231 ~v~~l~~s~~~~~~l~sgs-----------------~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~la 293 (358)
....+...+++. ++++.. ..|.|.-++.. .. ..+...-..-+.|+|+|+++.+++
T Consensus 166 ~pND~~v~~~G~-fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~---~~----~~~~~~l~~pNGia~spDg~~lYv 237 (355)
T 3sre_A 166 SVNDIVAVGPEH-FYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN---DV----RVVAEGFDFANGINISPDGKYVYI 237 (355)
T ss_dssp SEEEEEEEETTE-EEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT---CC----EEEEEEESSEEEEEECTTSSEEEE
T ss_pred CCceEEEeCCCC-EEecCCcEeCCcccccchhhccCCccEEEEEECC---eE----EEeecCCcccCcceECCCCCEEEE
Confidence 577888888875 555543 12445555541 11 222223356789999999986777
Q ss_pred EEECCCcEEEEECCCCCCe--eEEEecCCCCeEEEEEeC-CCCcEEEEEe
Q 018322 294 SCSVDGHIAIWDTRVGKSA--LTSFKAHNADVNVISWNR-LASCLLASGS 340 (358)
Q Consensus 294 s~s~Dg~I~iwD~r~~~~~--~~~~~~h~~~V~~i~~~p-~~~~~lasgs 340 (358)
+-+..+.|..|++...... ...+ ......-.+++.+ +| ++.+++.
T Consensus 238 adt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G-~lwva~~ 285 (355)
T 3sre_A 238 AELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTG-DLWVGCH 285 (355)
T ss_dssp EEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTC-CEEEEEE
T ss_pred EeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCC-cEEEEec
Confidence 7777899999998742221 1122 2244567788888 58 6666554
No 313
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=90.32 E-value=2.5 Score=41.33 Aligned_cols=48 Identities=17% Similarity=0.176 Sum_probs=31.4
Q ss_pred EEEEEECCCcEEEEECCCCCCeeEEEecCCC-CeEEEEEeCCCCcEEEEE
Q 018322 291 VFASCSVDGHIAIWDTRVGKSALTSFKAHNA-DVNVISWNRLASCLLASG 339 (358)
Q Consensus 291 ~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~-~V~~i~~~p~~~~~lasg 339 (358)
+++.++.||.|+.||.++++ .+.++..... ...-+.|..+|..++++.
T Consensus 486 ~vf~gt~dg~l~A~D~~tG~-~lW~~~l~~g~~~~P~~y~~~G~qyv~~~ 534 (599)
T 1w6s_A 486 LVFYGTLDGYLKARDSDTGD-LLWKFKIPSGAIGYPMTYTHKGTQYVAIY 534 (599)
T ss_dssp EEEEECTTSEEEEEETTTCC-EEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred EEEEECCCCeEEEEECCCCC-EEEEeeCCCCcEeccEEEEeCCEEEEEEE
Confidence 66679999999999999964 6666643322 123355666774455544
No 314
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=90.30 E-value=7.1 Score=35.17 Aligned_cols=115 Identities=12% Similarity=0.055 Sum_probs=64.3
Q ss_pred EEcCCCCCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCccc--CCCccccCCCcEEEEEECCC---CCCEEEEEE--
Q 018322 224 KFGGHKDEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNV--DPNPFIGHSASVEDLQWSPT---EPDVFASCS-- 296 (358)
Q Consensus 224 ~~~~h~~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~--~~~~~~~h~~~V~~v~~sp~---~~~~las~s-- 296 (358)
.+...-...++|+|.|++. +|++--..|.|++++...+....+ ....+.........|+++|+ +..++++-+
T Consensus 26 ~va~gL~~P~~ia~~pdG~-llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~ 104 (347)
T 3das_A 26 TVATGLNSPWGLAPLPGGD-LLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSA 104 (347)
T ss_dssp EEECCCSSEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECS
T ss_pred EeecCCCCceEEEEcCCCc-EEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecC
Confidence 3444445788999999986 655554489999998654221110 01122233467899999995 332555433
Q ss_pred CCCcEEEEECCCC---------CCeeEE-Ee-cCCCCeEEEEEeCCCCcEEEEEe
Q 018322 297 VDGHIAIWDTRVG---------KSALTS-FK-AHNADVNVISWNRLASCLLASGS 340 (358)
Q Consensus 297 ~Dg~I~iwD~r~~---------~~~~~~-~~-~h~~~V~~i~~~p~~~~~lasgs 340 (358)
.+..|.-|..... ...+.. +. .....-..|.|.|++ .++++.+
T Consensus 105 ~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG-~Lyvt~G 158 (347)
T 3das_A 105 SDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDK-MLYAGTG 158 (347)
T ss_dssp SSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTS-CEEEECB
T ss_pred CCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCC-CEEEEEC
Confidence 3445555554431 111211 21 112234679999999 7777654
No 315
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=90.27 E-value=4.5 Score=36.23 Aligned_cols=116 Identities=10% Similarity=0.065 Sum_probs=71.7
Q ss_pred EcCCCCCeEEEEeCCCCCCeEEEEe-CCCcEEEEecCCCCCcccCCCcccc-----C-CCcEEEEEE---CCCCCCEEEE
Q 018322 225 FGGHKDEGYAIDWNPITTGRLVTGD-CNSCIYLWEPASDATWNVDPNPFIG-----H-SASVEDLQW---SPTEPDVFAS 294 (358)
Q Consensus 225 ~~~h~~~v~~l~~s~~~~~~l~sgs-~dg~I~lwd~~~~~~~~~~~~~~~~-----h-~~~V~~v~~---sp~~~~~las 294 (358)
+.....-..+++|.+... +|..++ ..++|..|+...+..... .+.+ . ...+..|.| .|.+. ++++
T Consensus 8 ~~~~~~yPE~~~wd~~~g-~~~vs~l~~g~V~~~~~~~~~~~~~---~~~~~s~~g~~~~~~sGl~~~~~D~~gr-L~vv 82 (334)
T 2p9w_A 8 VKVKNLTPEDTIYDRTRQ-VFYQSNLYKGRIEVYNPKTQSHFNV---VIDGASSNGDGEQQMSGLSLLTHDNSKR-LFAV 82 (334)
T ss_dssp ECCTTCCCSCEEEETTTT-EEEEEETTTTEEEEECTTTCCEEEE---CCTTTCCSSCCSEEEEEEEESSSSSCCE-EEEE
T ss_pred ecCcccCCcCccCcCCCC-EEEEEeccCCEEEEEcCCCCeEEEE---ecCCccccCCCcceeeEEEEeccCCCCc-EEEE
Confidence 333334455899988665 666666 689999999864322221 1221 1 124679999 68876 6665
Q ss_pred EEC-------------CCcEEEEECC---CCCCeeEEEe--cC-----------CCCeEEEEEeCCCCcEEEEEeCC-CC
Q 018322 295 CSV-------------DGHIAIWDTR---VGKSALTSFK--AH-----------NADVNVISWNRLASCLLASGSDD-GT 344 (358)
Q Consensus 295 ~s~-------------Dg~I~iwD~r---~~~~~~~~~~--~h-----------~~~V~~i~~~p~~~~~lasgs~D-g~ 344 (358)
... +..|..||+. +++ .+.... .. ....+.++..++| +..++++.- +.
T Consensus 83 ~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~-~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~G-naYVt~s~~~~~ 160 (334)
T 2p9w_A 83 MKNAKSFNFADQSSHGASSFHSFNLPLSENSK-PVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDG-NSYVAFALGMPA 160 (334)
T ss_dssp EEETTTTCTTSCCSSSCCEEEEEESSCCTTCC-CSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTS-CEEEEEEESSCE
T ss_pred EcccccccccccccCCCCEEEEEcCCcCCCCC-EEEEecCccccccccccccccccCCceeEECCCC-CEEEeCCCCCCe
Confidence 431 6789999998 543 333332 11 1248899999999 777777665 44
Q ss_pred EEE
Q 018322 345 FSI 347 (358)
Q Consensus 345 i~i 347 (358)
|..
T Consensus 161 I~r 163 (334)
T 2p9w_A 161 IAR 163 (334)
T ss_dssp EEE
T ss_pred EEE
Confidence 333
No 316
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=90.21 E-value=2.1 Score=38.62 Aligned_cols=106 Identities=8% Similarity=0.098 Sum_probs=58.5
Q ss_pred CceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCC---CC
Q 018322 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPI---TT 242 (358)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~---~~ 242 (358)
..-+.+.|.|++ .++++ ...|.|++++ ......+. ..+ .+.........|+|+|+ +.
T Consensus 31 ~~P~~ia~~pdG-~l~V~-e~~g~I~~i~-~g~~~~~~---------------~~~--v~~~g~~~p~gia~~pdf~~~g 90 (352)
T 2ism_A 31 EVPWALAFLPDG-GMLIA-ERPGRIRLFR-EGRLSTYA---------------ELS--VYHRGESGLLGLALHPRFPQEP 90 (352)
T ss_dssp SCEEEEEECTTS-CEEEE-ETTTEEEEEE-TTEEEEEE---------------ECC--CCCSTTCSEEEEEECTTTTTSC
T ss_pred CCceEEEEcCCC-eEEEE-eCCCeEEEEE-CCCccEee---------------cce--EeecCCCCceeEEECCCCCCCC
Confidence 345689999999 56655 5569999998 32100000 001 11122346789999998 43
Q ss_pred CeEEEEeC-C-----CcEEEEecCCCCCc---ccCCCccc-----cCCCcEEEEEECCCCCCEEEEEE
Q 018322 243 GRLVTGDC-N-----SCIYLWEPASDATW---NVDPNPFI-----GHSASVEDLQWSPTEPDVFASCS 296 (358)
Q Consensus 243 ~~l~sgs~-d-----g~I~lwd~~~~~~~---~~~~~~~~-----~h~~~V~~v~~sp~~~~~las~s 296 (358)
.|..+.. . ..|..|+... ... ......+. .|. ...|+|.|++. ++++.+
T Consensus 91 -~lYv~~~~~~~~~~~~v~r~~~~~-~~~~~~~~l~~~~p~~~~~~h~--~~~l~~~pdG~-Lyv~~G 153 (352)
T 2ism_A 91 -YVYAYRTVAEGGLRNQVVRLRHLG-ERGVLDRVVLDGIPARPHGLHS--GGRIAFGPDGM-LYVTTG 153 (352)
T ss_dssp -EEEEEEEECTTSSEEEEEEEEECS-SCEEEEEEEEEEECCCTTCCCC--CCCEEECTTSC-EEEECC
T ss_pred -EEEEEEecCCCCCccEEEEEEeCC-CCcCceEEEEEeCCCCCCCCcC--CceEEECCCCC-EEEEEC
Confidence 4544432 2 5777787753 211 00001111 232 35899999996 776654
No 317
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=90.07 E-value=5.3 Score=42.27 Aligned_cols=154 Identities=7% Similarity=0.009 Sum_probs=88.4
Q ss_pred ceeEEEEcC---CCCcEEEEEe----------CCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeE
Q 018322 167 CVNRIRAMT---QNPHICASWA----------DTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGY 233 (358)
Q Consensus 167 ~V~~i~~~p---~~~~~lat~s----------~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 233 (358)
.+.+++... +...+++.|+ ..|.|++|++... ..+.+.. ....+.++
T Consensus 830 ~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~-------------------kL~lv~~-~~v~g~v~ 889 (1158)
T 3ei3_A 830 YALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDG-------------------KLQTVAE-KEVKGAVY 889 (1158)
T ss_dssp EEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETT-------------------EEEEEEE-EEESSCEE
T ss_pred ceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECC-------------------EEEEEEE-EEcCCcCE
Confidence 345555432 2235777776 3478888888631 0112221 12346788
Q ss_pred EEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCccccCCC-cEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCe
Q 018322 234 AIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIGHSA-SVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSA 312 (358)
Q Consensus 234 ~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~-~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~ 312 (358)
+|+--. |+|++|- ..+|++|++....... .....+.. .+.++.. .+. +++.|..-..|.++-.+.....
T Consensus 890 al~~~~---g~Lla~i-g~~l~vy~l~~~~~L~---~~~~~~~~i~~~~l~~--~~~-~I~vgD~~~Sv~~~~y~~~~~~ 959 (1158)
T 3ei3_A 890 SMVEFN---GKLLASI-NSTVRLYEWTTEKELR---TECNHYNNIMALYLKT--KGD-FILVGDLMRSVLLLAYKPMEGN 959 (1158)
T ss_dssp EEEEET---TEEEEEE-TTEEEEEEECTTSCEE---EEEEECCCSCEEEEEE--ETT-EEEEEESSBCEEEEEEETTTTE
T ss_pred EEeeeC---CEEEEEc-CCEEEEEECCCCceEE---EEeeccccEEEEEEec--cCC-EEEEEEhhheEEEEEEEcCCCe
Confidence 887432 3677665 5799999996532211 00111111 1224433 344 7888888888887665543333
Q ss_pred eEEE--ecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCC
Q 018322 313 LTSF--KAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRL 352 (358)
Q Consensus 313 ~~~~--~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~ 352 (358)
+..+ ..+...++++.|-.++ .++.+..+|.|.+.....
T Consensus 960 L~~~a~D~~~~~vta~~~ld~~--t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 960 FEEIARDFNPNWMSAVEILDDD--NFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp EEEEEECCSCBCEEEEEEEETT--EEEEEETTSEEEEEEECT
T ss_pred EEEEEeecccccEEEEEEEccC--cEEEEcCCCcEEEEecCC
Confidence 4334 3455678888887655 567788899998886543
No 318
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=90.06 E-value=8.6 Score=33.11 Aligned_cols=100 Identities=12% Similarity=0.200 Sum_probs=52.6
Q ss_pred eEEEEeCC-----CcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECC-----CcEEEEECCCCCCee
Q 018322 244 RLVTGDCN-----SCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVD-----GHIAIWDTRVGKSAL 313 (358)
Q Consensus 244 ~l~sgs~d-----g~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~D-----g~I~iwD~r~~~~~~ 313 (358)
+++.|+.+ ..+.+||+.+ ..|.... .+.........+.+ ++. +++.|+.+ ..+.+||+.+...
T Consensus 162 iyv~GG~~~~~~~~~~~~~d~~~-~~W~~~~-~~p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~v~~yd~~~~~W-- 234 (301)
T 2vpj_A 162 IYCLGGYDGLNILNSVEKYDPHT-GHWTNVT-PMATKRSGAGVALL--NDH-IYVVGGFDGTAHLSSVEAYNIRTDSW-- 234 (301)
T ss_dssp EEEECCBCSSCBCCCEEEEETTT-TEEEEEC-CCSSCCBSCEEEEE--TTE-EEEECCBCSSSBCCCEEEEETTTTEE--
T ss_pred EEEECCCCCCcccceEEEEeCCC-CcEEeCC-CCCcccccceEEEE--CCE-EEEEeCCCCCcccceEEEEeCCCCcE--
Confidence 66666544 4688899876 4554321 11111111122222 344 78888764 4689999987421
Q ss_pred EEEec---CCCCeEEEEEeCCCCcEEEEEeCC-----CCEEEEeCCCC
Q 018322 314 TSFKA---HNADVNVISWNRLASCLLASGSDD-----GTFSIHDLRLL 353 (358)
Q Consensus 314 ~~~~~---h~~~V~~i~~~p~~~~~lasgs~D-----g~i~iwDlr~~ 353 (358)
..+.. ......++.+ ++ .+++.|+.+ ..|.+||+.+.
T Consensus 235 ~~~~~~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 235 TTVTSMTTPRCYVGATVL--RG-RLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp EEECCCSSCCBSCEEEEE--TT-EEEEECCBCSSSBEEEEEEEETTTT
T ss_pred EECCCCCCcccceeEEEE--CC-EEEEEcCcCCCcccccEEEEcCCCC
Confidence 12211 1111122222 45 788888765 35788888764
No 319
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=89.52 E-value=10 Score=35.57 Aligned_cols=113 Identities=9% Similarity=0.076 Sum_probs=63.8
Q ss_pred CCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCC--CcccCCC-ccc-----cCCCcEEEEEECCC---CCCEEEEEECC
Q 018322 230 DEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDA--TWNVDPN-PFI-----GHSASVEDLQWSPT---EPDVFASCSVD 298 (358)
Q Consensus 230 ~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~--~~~~~~~-~~~-----~h~~~V~~v~~sp~---~~~~las~s~D 298 (358)
...++|+|.|++.++|+++...|.|++++..... .....+. .+. ........|+|+|+ ...++++-+..
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 3567999999986567788889999999753211 1111111 111 11356789999996 22255554421
Q ss_pred C------------cEEEEECCCC---------CCeeEEEe--cCCCCeEEEEEeCCCCcEEEEEeCCC
Q 018322 299 G------------HIAIWDTRVG---------KSALTSFK--AHNADVNVISWNRLASCLLASGSDDG 343 (358)
Q Consensus 299 g------------~I~iwD~r~~---------~~~~~~~~--~h~~~V~~i~~~p~~~~~lasgs~Dg 343 (358)
. .|.-|.+... ...+..+. .....-..|+|.|++ .++++.++.+
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG-~LYv~~Gd~~ 160 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDG-FLYIILGDGM 160 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTS-CEEEEECCTT
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCC-cEEEEeCCCC
Confidence 1 3333554321 11223332 122346889999999 7777766543
No 320
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=89.47 E-value=9.6 Score=32.84 Aligned_cols=92 Identities=12% Similarity=0.158 Sum_probs=47.6
Q ss_pred CcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECC-----CcEEEEECCCCCCeeEEEecC---CCCe
Q 018322 252 SCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVD-----GHIAIWDTRVGKSALTSFKAH---NADV 323 (358)
Q Consensus 252 g~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~D-----g~I~iwD~r~~~~~~~~~~~h---~~~V 323 (358)
..+.+||+.+ ..|.... .+.........+.+ ++. +++.|+.+ ..+.+||+.+... ..+... ....
T Consensus 173 ~~~~~yd~~~-~~W~~~~-~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~yd~~~~~W--~~~~~~~~~r~~~ 245 (302)
T 2xn4_A 173 STVECYNATT-NEWTYIA-EMSTRRSGAGVGVL--NNL-LYAVGGHDGPLVRKSVEVYDPTTNAW--RQVADMNMCRRNA 245 (302)
T ss_dssp CCEEEEETTT-TEEEEEC-CCSSCCBSCEEEEE--TTE-EEEECCBSSSSBCCCEEEEETTTTEE--EEECCCSSCCBSC
T ss_pred cEEEEEeCCC-CcEEECC-CCccccccccEEEE--CCE-EEEECCCCCCcccceEEEEeCCCCCE--eeCCCCCCccccC
Confidence 3588899876 4554321 11111111122222 344 78888764 4688999987321 122111 1111
Q ss_pred EEEEEeCCCCcEEEEEeCCC-----CEEEEeCCCC
Q 018322 324 NVISWNRLASCLLASGSDDG-----TFSIHDLRLL 353 (358)
Q Consensus 324 ~~i~~~p~~~~~lasgs~Dg-----~i~iwDlr~~ 353 (358)
..+.+ ++ .+++.|+.++ .+.+||+.+.
T Consensus 246 ~~~~~--~~-~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 246 GVCAV--NG-LLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp EEEEE--TT-EEEEECCBCSSSBCCCEEEEETTTT
T ss_pred eEEEE--CC-EEEEECCcCCCcccccEEEEcCCCC
Confidence 12222 45 7888887654 4889998764
No 321
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=89.36 E-value=12 Score=33.65 Aligned_cols=225 Identities=11% Similarity=0.092 Sum_probs=126.1
Q ss_pred CCCCceee-eChhHHHhhhcccccCcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCC
Q 018322 44 LEEGEELQ-CDPTAYNSLHAFHIGWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELV 122 (358)
Q Consensus 44 ~~~~~~l~-~~~~~Y~~~~~~~~~wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~ 122 (358)
|+.+..|+ ||-.+-..|.++.+.=|..--.|+.+. +.-||++| .++-|.+..
T Consensus 83 Lrag~~LQiFnletK~klks~~~~e~VvfWkWis~~----------~L~lVT~t--------aVyHWs~~~--------- 135 (365)
T 2xzh_A 83 LKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLN----------TVALVTDN--------AVYHWSMEG--------- 135 (365)
T ss_dssp EEETTEEEEEETTTTEEEEEEECSSCEEEEEECSSS----------EEEEEESS--------EEEEEESST---------
T ss_pred EecCCeEEEechHHhhhhcceecCCccEEEEecCCC----------eEEEEcCC--------cEEEEcccC---------
Confidence 33444443 455555667777777777777788653 46677666 778887631
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCeEEEEEecC--CCceeEEEEcCCCCcEEEEEe------CCCcEEEEe
Q 018322 123 PNKPSNDDEDVDSESSDSDEDSDDDEEGGSGTPILQLRKVAH--QGCVNRIRAMTQNPHICASWA------DTGHVQVWD 194 (358)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H--~~~V~~i~~~p~~~~~lat~s------~dg~V~iwd 194 (358)
+ ..|...+...+. ...|-.-+.+++...++++|- -.|.+.||.
T Consensus 136 ----------------~-------------s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS 186 (365)
T 2xzh_A 136 ----------------E-------------SQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYS 186 (365)
T ss_dssp ----------------T-------------CCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEE
T ss_pred ----------------C-------------CCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEe
Confidence 0 145444333221 245555566676655555543 236788998
Q ss_pred CCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeC--CCCCCeEEEEeC---CCcEEEEecCCC--CCccc
Q 018322 195 LRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWN--PITTGRLVTGDC---NSCIYLWEPASD--ATWNV 267 (358)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s--~~~~~~l~sgs~---dg~I~lwd~~~~--~~~~~ 267 (358)
... +..+.+.||......+... +....+|+-+.. .+.+++-++... +....
T Consensus 187 ~er----------------------~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f 244 (365)
T 2xzh_A 187 VDR----------------------KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPF 244 (365)
T ss_dssp TTT----------------------TEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCC
T ss_pred ecc----------------------cccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCc
Confidence 876 3334566665433333222 111113333322 258999998543 11110
Q ss_pred CCCc----cc--cCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeC
Q 018322 268 DPNP----FI--GHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRLASCLLASGSD 341 (358)
Q Consensus 268 ~~~~----~~--~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~ 341 (358)
..+. +. .-.+---+++.++... ++...+.-|.|++||+.++ .++...+-....|-.-+-+... .=++.-..
T Consensus 245 ~kk~vdi~fppea~~DFPVamqvs~kyg-viyviTK~G~ihlyDleTg-t~i~~nrIS~d~iF~ta~~~~~-~Gi~~Vnr 321 (365)
T 2xzh_A 245 PKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLETG-TCIYMNRISGETIFVTAPHEAT-AGIIGVNR 321 (365)
T ss_dssp CCEEEEECCCTTCTTCCEEEEEEETTTT-EEEEEETTSEEEEEETTTC-CEEEEEECCSSCEEEEEEEGGG-TEEEEEET
T ss_pred ccccceeeCCccccCCceEEEEecccCC-EEEEEeCCcEEEEEEcccC-cEEEEeccCCCceEEecccCCC-CcEEEEcC
Confidence 0000 11 1234455778888777 8999999999999999996 5766666666666555554433 23333346
Q ss_pred CCCEEEEe
Q 018322 342 DGTFSIHD 349 (358)
Q Consensus 342 Dg~i~iwD 349 (358)
.|.|.-..
T Consensus 322 ~GqVl~v~ 329 (365)
T 2xzh_A 322 KGQVLSVC 329 (365)
T ss_dssp TCEEEEEE
T ss_pred CCEEEEEE
Confidence 66655443
No 322
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=89.22 E-value=8.7 Score=35.94 Aligned_cols=115 Identities=12% Similarity=0.134 Sum_probs=62.4
Q ss_pred EEcCCCCCeEEEEeCCCCCCeEEEEeCC-CcEEEEecCCCCCccc-CC-Cccc--cCCCcEEEEEECCC---CCCEEEEE
Q 018322 224 KFGGHKDEGYAIDWNPITTGRLVTGDCN-SCIYLWEPASDATWNV-DP-NPFI--GHSASVEDLQWSPT---EPDVFASC 295 (358)
Q Consensus 224 ~~~~h~~~v~~l~~s~~~~~~l~sgs~d-g~I~lwd~~~~~~~~~-~~-~~~~--~h~~~V~~v~~sp~---~~~~las~ 295 (358)
.+...-...++|+|.|++. ++++ ... +.|++++...+....+ .. ..+. .....+..|+|+|+ +..++++-
T Consensus 21 ~~a~~l~~P~~~a~~pdG~-l~V~-e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~ 98 (454)
T 1cru_A 21 VILSNLNKPHALLWGPDNQ-IWLT-ERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISG 98 (454)
T ss_dssp EEECCCSSEEEEEECTTSC-EEEE-ETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEE
T ss_pred EEECCCCCceEEEEcCCCc-EEEE-EcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEE
Confidence 3333345678999999986 5555 555 4788887643221110 01 1111 12456789999995 44355555
Q ss_pred EC------------CCcEEEEECCCCC------CeeEE-Ee-cCCCCeEEEEEeCCCCcEEEEEeC
Q 018322 296 SV------------DGHIAIWDTRVGK------SALTS-FK-AHNADVNVISWNRLASCLLASGSD 341 (358)
Q Consensus 296 s~------------Dg~I~iwD~r~~~------~~~~~-~~-~h~~~V~~i~~~p~~~~~lasgs~ 341 (358)
+. ...|.-|+..... ..+.. +. ........|+|.|+| .++++.++
T Consensus 99 s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG-~Lyv~~Gd 163 (454)
T 1cru_A 99 TFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQ-KIYYTIGD 163 (454)
T ss_dssp EEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTS-CEEEEECC
T ss_pred eccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCC-eEEEEECC
Confidence 43 1245555543211 11221 21 112347899999999 67666554
No 323
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=88.78 E-value=19 Score=38.92 Aligned_cols=200 Identities=11% Similarity=0.109 Sum_probs=107.6
Q ss_pred CCCCceee-eChhHHHhhhcccccCcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCC
Q 018322 44 LEEGEELQ-CDPTAYNSLHAFHIGWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELV 122 (358)
Q Consensus 44 ~~~~~~l~-~~~~~Y~~~~~~~~~wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~ 122 (358)
|+.|..|+ |+-.+-.-+.++.+.=|..--.|+.+. +.-+|++| .|+-|.+..-
T Consensus 82 Lrag~~lQiFnl~~k~klks~~~~e~VvfWkWis~~----------~l~lVT~~--------aVyHW~~~~~-------- 135 (1630)
T 1xi4_A 82 LKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLN----------TVALVTDN--------AVYHWSMEGE-------- 135 (1630)
T ss_pred EecCCeEEEeehHHhhhhcccccCCCceEEEecCCC----------eeEEEcCC--------eEEEeccCCC--------
Confidence 44455554 566777789999998888888898764 46677666 7888877310
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCeEEEEEec--CCCceeEEEEcCCCCcEEEEEe------CCCcEEEEe
Q 018322 123 PNKPSNDDEDVDSESSDSDEDSDDDEEGGSGTPILQLRKVA--HQGCVNRIRAMTQNPHICASWA------DTGHVQVWD 194 (358)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--H~~~V~~i~~~p~~~~~lat~s------~dg~V~iwd 194 (358)
..|...+...+ -...|-.-+.+++...++++|- -.|.+.+|.
T Consensus 136 ------------------------------s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS 185 (1630)
T 1xi4_A 136 ------------------------------SQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYS 185 (1630)
T ss_pred ------------------------------CccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeee
Confidence 12211111000 0234555566666644444443 347888998
Q ss_pred CCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeC--CCCCCeEEEEe---CCCcEEEEecCCC--CCccc
Q 018322 195 LRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWN--PITTGRLVTGD---CNSCIYLWEPASD--ATWNV 267 (358)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s--~~~~~~l~sgs---~dg~I~lwd~~~~--~~~~~ 267 (358)
+.... .+.+.||......+... +.....++-+. ..+.++|-++... +....
T Consensus 186 ~er~~----------------------sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f 243 (1630)
T 1xi4_A 186 VDRKV----------------------SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPF 243 (1630)
T ss_pred ccccc----------------------chhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCC
Confidence 87632 12234444322222221 11111222221 1268888888543 11110
Q ss_pred CCC----cccc--CCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEecCCCCe
Q 018322 268 DPN----PFIG--HSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADV 323 (358)
Q Consensus 268 ~~~----~~~~--h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V 323 (358)
..+ .+.. -..-..+++.++... ++...+.-|.|.++|+.++ .++..-+-....|
T Consensus 244 ~kk~~~~~~~~~~~~Dfpv~~~vs~k~g-~iy~itk~G~~~~~d~~t~-~~i~~~ris~~~i 303 (1630)
T 1xi4_A 244 PKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLETG-TCIYMNRISGETI 303 (1630)
T ss_pred ccccccccCCcccccCcceEEEeccccC-EEEEEecCceEEEEecccc-hhhhhccccCCce
Confidence 000 0111 123345677888777 8889999999999999985 3443333333333
No 324
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=88.30 E-value=17 Score=34.05 Aligned_cols=225 Identities=11% Similarity=0.083 Sum_probs=129.9
Q ss_pred CCCCceee-eChhHHHhhhcccccCcceeEEEEeccCCCccccCCceEEEEEeecCCCCCCceEEEEEeeccCCccccCC
Q 018322 44 LEEGEELQ-CDPTAYNSLHAFHIGWPCLSFDIVRDTLGLVRNEFPHTAYFVAGTQAEKPSWNSIGVFKVSNISGKRRELV 122 (358)
Q Consensus 44 ~~~~~~l~-~~~~~Y~~~~~~~~~wP~ls~~~~~d~~~~~~~~~~~~~~~v~GT~~~~~~~n~i~i~~~~~l~~~~~~~~ 122 (358)
|+.+..|+ ||-.+-.-+.++.+.=|..--.|+.+. +.-||++| .++-|.+..
T Consensus 82 Lrag~~lQiFnle~K~klks~~~~e~VvfWkWis~~----------~l~lVT~t--------aVyHWsi~~--------- 134 (494)
T 1bpo_A 82 LKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLN----------TVALVTDN--------AVYHWSMEG--------- 134 (494)
T ss_dssp EEETTEEEEEETTTTEEEEEEECSSCCCEEEEEETT----------EEEEECSS--------EEEEEESSS---------
T ss_pred EecCCeEEEEchHHhhhhcceecCCCceEEEecCCC----------eEEEEcCC--------eeEEecccC---------
Confidence 34444444 455556677788877788888888764 35666555 777787621
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCeEEEEEecC--CCceeEEEEcCCCCcEEEEEe------CCCcEEEEe
Q 018322 123 PNKPSNDDEDVDSESSDSDEDSDDDEEGGSGTPILQLRKVAH--QGCVNRIRAMTQNPHICASWA------DTGHVQVWD 194 (358)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H--~~~V~~i~~~p~~~~~lat~s------~dg~V~iwd 194 (358)
+ ..|...+...+. ...|-.-+.+++...++.+|- -.|.+.+|.
T Consensus 135 ----------------~-------------s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS 185 (494)
T 1bpo_A 135 ----------------E-------------SQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYS 185 (494)
T ss_dssp ----------------S-------------CCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEE
T ss_pred ----------------C-------------CCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEee
Confidence 0 145444333221 245555566777655554443 237788998
Q ss_pred CCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCC--CCCeEEEEeC---CCcEEEEecCCC--CCccc
Q 018322 195 LRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPI--TTGRLVTGDC---NSCIYLWEPASD--ATWNV 267 (358)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~--~~~~l~sgs~---dg~I~lwd~~~~--~~~~~ 267 (358)
... +..+.+.||......+..... ...+|+-+.. .+.+++-++... +....
T Consensus 186 ~er----------------------~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f 243 (494)
T 1bpo_A 186 VDR----------------------KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPF 243 (494)
T ss_dssp STT----------------------CCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCC
T ss_pred ccc----------------------cccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCc
Confidence 876 334456677554433333211 1113333333 278999998543 11110
Q ss_pred CCC----cc--ccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeC
Q 018322 268 DPN----PF--IGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVISWNRLASCLLASGSD 341 (358)
Q Consensus 268 ~~~----~~--~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~ 341 (358)
..+ .+ ..-.+--.+++.++... ++...+.-|.|++||+.++ .++..-+-....|-.-+-+... .-++....
T Consensus 244 ~kk~vdv~fppe~~~DFPvamqvs~kyg-viyviTK~G~i~lyDleTg-t~i~~nrIs~~~iF~t~~~~~~-~Gi~~Vnr 320 (494)
T 1bpo_A 244 PKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLETG-TCIYMNRISGETIFVTAPHEAT-AGIIGVNR 320 (494)
T ss_dssp CCEEEECCCCTTSTTCCEEEEEEETTTT-EEEEEETTSEEEEEETTTC-CEEEEEECCSSCEEEEEEETTT-TEEEEEET
T ss_pred cceeeeeeCCcccccCceeEEEecccCC-EEEEEecCceEEEEecccc-eeeeeecccCCceEEecccCCC-CcEEEEcc
Confidence 000 01 11234456788888887 8999999999999999996 5666666666666665555544 33444446
Q ss_pred CCCEEEEe
Q 018322 342 DGTFSIHD 349 (358)
Q Consensus 342 Dg~i~iwD 349 (358)
.|.|.--.
T Consensus 321 ~GqVl~v~ 328 (494)
T 1bpo_A 321 KGQVLSVC 328 (494)
T ss_dssp TCEEEEEE
T ss_pred CceEEEEE
Confidence 66655433
No 325
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=87.58 E-value=16 Score=32.97 Aligned_cols=146 Identities=11% Similarity=0.100 Sum_probs=83.6
Q ss_pred EEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCC----CCC--eEEEEe-C--
Q 018322 180 ICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPI----TTG--RLVTGD-C-- 250 (358)
Q Consensus 180 ~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~----~~~--~l~sgs-~-- 250 (358)
+++.....+-+.+||+.. +.+..+.. +.+..++.-|. +.. ++++.. .
T Consensus 42 ~ii~t~k~~gL~Vydl~G----------------------~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~ 97 (355)
T 3amr_A 42 KLITTNKKSGLVVYSLDG----------------------KMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEG 97 (355)
T ss_dssp EEEEEETTTEEEEEETTS----------------------CEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTT
T ss_pred EEEEEcCCCCEEEEcCCC----------------------cEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCC
Confidence 444446668899999954 44555543 45566666552 110 223333 3
Q ss_pred CCcEEEEecCC-CCCcccCCC---ccccCCCcEEEEEE--CCC-CCCEEEEEECCCcEEEEECCC---C---CCeeEEEe
Q 018322 251 NSCIYLWEPAS-DATWNVDPN---PFIGHSASVEDLQW--SPT-EPDVFASCSVDGHIAIWDTRV---G---KSALTSFK 317 (358)
Q Consensus 251 dg~I~lwd~~~-~~~~~~~~~---~~~~h~~~V~~v~~--sp~-~~~~las~s~Dg~I~iwD~r~---~---~~~~~~~~ 317 (358)
+.+|.+|++.. .+.+..... ++..-...+..+|+ +|. +..+++....+|.+..|++.. + .+.+.++.
T Consensus 98 ~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~ 177 (355)
T 3amr_A 98 KNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK 177 (355)
T ss_dssp CCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE
T ss_pred CCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec
Confidence 57899997742 122211101 11111155667787 774 443566667789999998843 1 12445554
Q ss_pred cCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCC
Q 018322 318 AHNADVNVISWNRLASCLLASGSDDGTFSIHDLR 351 (358)
Q Consensus 318 ~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr 351 (358)
. .+.+..+...+.. ..|+.+-.+.-|..+|.+
T Consensus 178 l-gsq~EgcvvDd~~-g~Lyv~eEd~GIw~~da~ 209 (355)
T 3amr_A 178 M-NSQTEGMAADDEY-GRLYIAEEDEAIWKFSAE 209 (355)
T ss_dssp C-SSCEEEEEEETTT-TEEEEEETTTEEEEEECS
T ss_pred C-CCCcceEEEcCCC-CeEEEecccceEEEEeCC
Confidence 3 4568888888877 677788777556666644
No 326
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=87.20 E-value=25 Score=34.82 Aligned_cols=110 Identities=12% Similarity=0.101 Sum_probs=58.2
Q ss_pred CCCCeEEEEeCCC--cEEEEecCCCCCcccCCC--ccccCCCcEEEEEECCCCCCEEEEEEC--C-----CcEEEEECCC
Q 018322 240 ITTGRLVTGDCNS--CIYLWEPASDATWNVDPN--PFIGHSASVEDLQWSPTEPDVFASCSV--D-----GHIAIWDTRV 308 (358)
Q Consensus 240 ~~~~~l~sgs~dg--~I~lwd~~~~~~~~~~~~--~~~~h~~~V~~v~~sp~~~~~las~s~--D-----g~I~iwD~r~ 308 (358)
.+. +++.|+.++ .+.+||+.+ ..|..... ...........+.+......+++.|+. + ..+.+||+.+
T Consensus 500 ~~~-iyv~GG~~~~~~v~~yd~~t-~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~ 577 (695)
T 2zwa_A 500 DGN-VLILGGVTEGPAMLLYNVTE-EIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDA 577 (695)
T ss_dssp TSC-EEEECCBCSSCSEEEEETTT-TEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECT
T ss_pred CCE-EEEECCCCCCCCEEEEECCC-CceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccC
Confidence 454 777776554 689999876 55653221 011111122234455542337777776 2 4588999987
Q ss_pred CCC-e---eEEEec---C-CCCeEEEEEeCCCCcEEEEEeCC--------CCEEEEeCCCC
Q 018322 309 GKS-A---LTSFKA---H-NADVNVISWNRLASCLLASGSDD--------GTFSIHDLRLL 353 (358)
Q Consensus 309 ~~~-~---~~~~~~---h-~~~V~~i~~~p~~~~~lasgs~D--------g~i~iwDlr~~ 353 (358)
... + -..+.. . .....++.+. ++ .+++.||.+ ..|.+||+.+.
T Consensus 578 ~~w~~~~~W~~~~~~p~~~R~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~v~~yd~~t~ 636 (695)
T 2zwa_A 578 ENATEPITVIKKLQHPLFQRYGSQIKYIT-PR-KLLIVGGTSPSGLFDRTNSIISLDPLSE 636 (695)
T ss_dssp TCSSCCEEEEEEEECGGGCCBSCEEEEEE-TT-EEEEECCBCSSCCCCTTTSEEEEETTTT
T ss_pred CccccceEEEEcCCCCCCCcccceEEEeC-CC-EEEEECCccCCCCCCCCCeEEEEECCCC
Confidence 541 0 111111 1 1112223332 25 788888743 46889998764
No 327
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=86.50 E-value=15 Score=31.56 Aligned_cols=100 Identities=12% Similarity=0.198 Sum_probs=51.2
Q ss_pred eEEEEeCC-----CcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECC-----CcEEEEECCCCCCee
Q 018322 244 RLVTGDCN-----SCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVD-----GHIAIWDTRVGKSAL 313 (358)
Q Consensus 244 ~l~sgs~d-----g~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~D-----g~I~iwD~r~~~~~~ 313 (358)
+++.|+.+ ..+.+||+.+ ..|.... ...........+.+ ++. +++.|+.+ ..+.+||+.+...
T Consensus 115 lyv~GG~~~~~~~~~~~~~d~~~-~~W~~~~-~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~d~~~~~W-- 187 (301)
T 2vpj_A 115 IYVSGGFDGSRRHTSMERYDPNI-DQWSMLG-DMQTAREGAGLVVA--SGV-IYCLGGYDGLNILNSVEKYDPHTGHW-- 187 (301)
T ss_dssp EEEECCBCSSCBCCEEEEEETTT-TEEEEEE-ECSSCCBSCEEEEE--TTE-EEEECCBCSSCBCCCEEEEETTTTEE--
T ss_pred EEEEcccCCCcccceEEEEcCCC-CeEEECC-CCCCCcccceEEEE--CCE-EEEECCCCCCcccceEEEEeCCCCcE--
Confidence 56666543 3588888866 4444211 11111111112222 444 77777764 4688999887321
Q ss_pred EEEec---CCCCeEEEEEeCCCCcEEEEEeCC-----CCEEEEeCCCC
Q 018322 314 TSFKA---HNADVNVISWNRLASCLLASGSDD-----GTFSIHDLRLL 353 (358)
Q Consensus 314 ~~~~~---h~~~V~~i~~~p~~~~~lasgs~D-----g~i~iwDlr~~ 353 (358)
..+.. ......++.+ ++ .+++.|+.+ ..+.+||+.+.
T Consensus 188 ~~~~~~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~v~~yd~~~~ 232 (301)
T 2vpj_A 188 TNVTPMATKRSGAGVALL--ND-HIYVVGGFDGTAHLSSVEAYNIRTD 232 (301)
T ss_dssp EEECCCSSCCBSCEEEEE--TT-EEEEECCBCSSSBCCCEEEEETTTT
T ss_pred EeCCCCCcccccceEEEE--CC-EEEEEeCCCCCcccceEEEEeCCCC
Confidence 11111 1111122222 44 788888764 46889998764
No 328
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=86.48 E-value=18 Score=32.50 Aligned_cols=150 Identities=13% Similarity=0.103 Sum_probs=80.6
Q ss_pred cCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEE----EcCCCCCeEEEEeC
Q 018322 163 AHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVK----FGGHKDEGYAIDWN 238 (358)
Q Consensus 163 ~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~h~~~v~~l~~s 238 (358)
..-..-+.|.|.|++ .++++-...|.|++++...... .++.. +.........|+++
T Consensus 29 ~gL~~P~~ia~~pdG-~llVter~~G~I~~v~~~~g~~-------------------~~v~~~~~v~~~g~~GllGia~~ 88 (347)
T 3das_A 29 TGLNSPWGLAPLPGG-DLLVSSRDEATITRVDAKTGRK-------------------TELGEVPGVSPSGEGGLLGIALS 88 (347)
T ss_dssp CCCSSEEEEEECTTS-CEEEEETTTCEEEEECTTTCCE-------------------EEEEECTTCCCBTTBSEEEEEEC
T ss_pred cCCCCceEEEEcCCC-cEEEEEecCCEEEEEECCCCcE-------------------eeecccCceeecCCCCceeeEec
Confidence 345677899999999 6777765589999987543110 11111 12234467899999
Q ss_pred CC--CCCeEEEE---eCCCcEEEEecCCCC----Cc---ccCCCcc---ccCCCcEEEEEECCCCCCEEEEEEC------
Q 018322 239 PI--TTGRLVTG---DCNSCIYLWEPASDA----TW---NVDPNPF---IGHSASVEDLQWSPTEPDVFASCSV------ 297 (358)
Q Consensus 239 ~~--~~~~l~sg---s~dg~I~lwd~~~~~----~~---~~~~~~~---~~h~~~V~~v~~sp~~~~~las~s~------ 297 (358)
|+ ..+.|... ..+..|.-|.+.... .. ......+ ..| .-..|.|.|++. ++++.+.
T Consensus 89 Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H--~g~~l~fgpDG~-Lyvt~Gd~~~~~~ 165 (347)
T 3das_A 89 PDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIH--NGGRIAFGPDKM-LYAGTGESGDTGL 165 (347)
T ss_dssp TTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSC--CCCCEEECTTSC-EEEECBCTTCGGG
T ss_pred cccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCc--cCccccCCCCCC-EEEEECCCCCCcc
Confidence 96 12245443 234566666654311 10 0000011 123 245689999997 7777553
Q ss_pred -------CCcEEEEECCCC--------CCeeEEEecCCCCeEEEEEeCCCCcEEEE
Q 018322 298 -------DGHIAIWDTRVG--------KSALTSFKAHNADVNVISWNRLASCLLAS 338 (358)
Q Consensus 298 -------Dg~I~iwD~r~~--------~~~~~~~~~h~~~V~~i~~~p~~~~~las 338 (358)
-|.|.-.+.... ...+. -.+|.. ...++|+|++ .++++
T Consensus 166 ~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~-a~G~RN-p~Gla~dp~G-~L~~~ 218 (347)
T 3das_A 166 SQDRKSLGGKILRMTPDGEPAPGNPFPGSPVY-SYGHRN-VQGLAWDDKQ-RLFAS 218 (347)
T ss_dssp TTCTTCSTTCEEEECTTSSBCTTCSSTTCCEE-EBCCSB-CCEEEECTTC-CEEEE
T ss_pred ccCCCCCCCEEEEEeCCCCccCCCCCCCCeEE-eeCCCC-cceEEECCCC-CEEEE
Confidence 244444444321 00111 124433 5678999987 55554
No 329
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=86.20 E-value=14 Score=33.01 Aligned_cols=151 Identities=11% Similarity=0.043 Sum_probs=76.7
Q ss_pred CceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCC---CC
Q 018322 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPI---TT 242 (358)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~---~~ 242 (358)
..-..|.|.|++..++++ ...|.|++++........ . ...+ ..+.........|+++|+ +.
T Consensus 18 ~~P~~i~~~pdG~~l~V~-e~~G~i~~~~~~g~~~~~--~------------~~~~-~v~~~g~~g~~gia~~pdf~~~g 81 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLIT-LRGGELRHWQAGKGLSAP--L------------SGVP-DVWAHGQGGLLDVVLAPDFAQSR 81 (353)
T ss_dssp SSEEEEEECSTTCCEEEE-ETTTEEEEEETTTEECCC--C------------BSCC-CCCCSTTCSEEEEEECTTHHHHC
T ss_pred CCcEEEEEcCCCCEEEEE-eCCceEEEEeCCCceeeE--e------------cCCc-ccccCCCCCceeEEECCCCCCCC
Confidence 456789999999326655 467999998853311000 0 0011 011122345689999996 33
Q ss_pred CeEEEEe-C-------CCcEEEEecCCCCCcc----cC--CCc---cccCCCcEEEEEECCCCCCEEEEEECC-------
Q 018322 243 GRLVTGD-C-------NSCIYLWEPASDATWN----VD--PNP---FIGHSASVEDLQWSPTEPDVFASCSVD------- 298 (358)
Q Consensus 243 ~~l~sgs-~-------dg~I~lwd~~~~~~~~----~~--~~~---~~~h~~~V~~v~~sp~~~~~las~s~D------- 298 (358)
.|..+. . ...|..|++....... .. ... ...|. -..|.|.|++. ++++.+..
T Consensus 82 -~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~--~~~l~~~pdG~-Lyv~~Gd~~~~~~~q 157 (353)
T 2g8s_A 82 -RIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHF--GGRLVFDGKGY-LFIALGENNQRPTAQ 157 (353)
T ss_dssp -EEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCC--CCCEEECSSSE-EEEEECCTTCGGGGG
T ss_pred -EEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCccc--CccEEECCCCc-EEEEECCCCCCCccC
Confidence 444442 2 2356666664321100 00 011 11232 35699999996 66665442
Q ss_pred ------CcEEEEECCCCC------------CeeEEEecCCCCeEEEEEeC-CCCcEEEE
Q 018322 299 ------GHIAIWDTRVGK------------SALTSFKAHNADVNVISWNR-LASCLLAS 338 (358)
Q Consensus 299 ------g~I~iwD~r~~~------------~~~~~~~~h~~~V~~i~~~p-~~~~~las 338 (358)
|.|.-++....- .....-.+|. ....++|.| .+ .++++
T Consensus 158 ~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~r-np~gl~~d~~~g-~l~~~ 214 (353)
T 2g8s_A 158 DLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIR-NPQGMAMNPWSN-ALWLN 214 (353)
T ss_dssp CTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCS-EEEEEEEETTTT-EEEEE
T ss_pred CCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCc-CccceEEECCCC-CEEEE
Confidence 456666654310 1111112333 367899999 56 55554
No 330
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=86.20 E-value=16 Score=31.63 Aligned_cols=102 Identities=15% Similarity=0.270 Sum_probs=51.7
Q ss_pred eEEEEeCC-----CcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECC-----CcEEEEECCCCCCe-
Q 018322 244 RLVTGDCN-----SCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVD-----GHIAIWDTRVGKSA- 312 (358)
Q Consensus 244 ~l~sgs~d-----g~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~D-----g~I~iwD~r~~~~~- 312 (358)
+++.|+.+ ..+.+||+.+ ..|.... .+.........+.+ ++. +++.|+.+ ..+.+||+.+....
T Consensus 124 iyv~GG~~~~~~~~~~~~yd~~~-~~W~~~~-~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 198 (308)
T 1zgk_A 124 IYAVGGSHGCIHHNSVERYEPER-DEWHLVA-PMLTRRIGVGVAVL--NRL-LYAVGGFDGTNRLNSAECYYPERNEWRM 198 (308)
T ss_dssp EEEECCEETTEECCCEEEEETTT-TEEEECC-CCSSCCBSCEEEEE--TTE-EEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred EEEEcCCCCCcccccEEEECCCC-CeEeECC-CCCccccceEEEEE--CCE-EEEEeCCCCCCcCceEEEEeCCCCeEee
Confidence 55665533 4688899876 4554321 11111111122222 344 77777764 46889998763211
Q ss_pred eEEEecCCCCeEEEEEeCCCCcEEEEEeCC-----CCEEEEeCCCC
Q 018322 313 LTSFKAHNADVNVISWNRLASCLLASGSDD-----GTFSIHDLRLL 353 (358)
Q Consensus 313 ~~~~~~h~~~V~~i~~~p~~~~~lasgs~D-----g~i~iwDlr~~ 353 (358)
+..+........++.+ ++ .+++.|+.+ ..+.+||+.+.
T Consensus 199 ~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 199 ITAMNTIRSGAGVCVL--HN-CIYAAGGYDGQDQLNSVERYDVETE 241 (308)
T ss_dssp CCCCSSCCBSCEEEEE--TT-EEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CCCCCCccccceEEEE--CC-EEEEEeCCCCCCccceEEEEeCCCC
Confidence 1011111111122233 45 788888764 46889998764
No 331
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=84.01 E-value=19 Score=31.17 Aligned_cols=102 Identities=10% Similarity=0.145 Sum_probs=52.4
Q ss_pred eEEEEeCC-----CcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECC-----CcEEEEECCCCCCe-
Q 018322 244 RLVTGDCN-----SCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVD-----GHIAIWDTRVGKSA- 312 (358)
Q Consensus 244 ~l~sgs~d-----g~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~D-----g~I~iwD~r~~~~~- 312 (358)
+++.|+.+ ..+.+||+.+ ..|.... .+.........+.+ ++. +++.|+.+ ..+.+||+.+....
T Consensus 171 iyv~GG~~~~~~~~~~~~yd~~~-~~W~~~~-~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 245 (308)
T 1zgk_A 171 LYAVGGFDGTNRLNSAECYYPER-NEWRMIT-AMNTIRSGAGVCVL--HNC-IYAAGGYDGQDQLNSVERYDVETETWTF 245 (308)
T ss_dssp EEEECCBCSSCBCCCEEEEETTT-TEEEECC-CCSSCCBSCEEEEE--TTE-EEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred EEEEeCCCCCCcCceEEEEeCCC-CeEeeCC-CCCCccccceEEEE--CCE-EEEEeCCCCCCccceEEEEeCCCCcEEE
Confidence 66666544 4688899876 4554321 11111111122233 444 78888765 56899999873211
Q ss_pred eEEEecCCCCeEEEEEeCCCCcEEEEEeCC-----CCEEEEeCCCC
Q 018322 313 LTSFKAHNADVNVISWNRLASCLLASGSDD-----GTFSIHDLRLL 353 (358)
Q Consensus 313 ~~~~~~h~~~V~~i~~~p~~~~~lasgs~D-----g~i~iwDlr~~ 353 (358)
+..+.........+.+ ++ .+++.|+.+ ..+.+||+.+.
T Consensus 246 ~~~~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 246 VAPMKHRRSALGITVH--QG-RIYVLGGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp CCCCSSCCBSCEEEEE--TT-EEEEECCBCSSCBCCEEEEEETTTT
T ss_pred CCCCCCCccceEEEEE--CC-EEEEEcCcCCCcccceEEEEcCCCC
Confidence 1111111111122222 45 788888754 35788888764
No 332
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=82.83 E-value=22 Score=30.53 Aligned_cols=94 Identities=12% Similarity=0.170 Sum_probs=47.8
Q ss_pred CcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECC-----CcEEEEECCCCCCe-eEEEecCCCCeEE
Q 018322 252 SCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVD-----GHIAIWDTRVGKSA-LTSFKAHNADVNV 325 (358)
Q Consensus 252 g~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~D-----g~I~iwD~r~~~~~-~~~~~~h~~~V~~ 325 (358)
..+.+||+.+ ..|.... .+.........+.+ ++. +++.|+.+ ..+.+||+.+.... +..+........+
T Consensus 169 ~~~~~yd~~~-~~W~~~~-~~p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~ 243 (306)
T 3ii7_A 169 NSCEVYDPAT-ETWTELC-PMIEARKNHGLVFV--KDK-IFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKC 243 (306)
T ss_dssp CCEEEEETTT-TEEEEEC-CCSSCCBSCEEEEE--TTE-EEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEE
T ss_pred ceEEEeCCCC-CeEEECC-CccchhhcceEEEE--CCE-EEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeE
Confidence 4588999876 4554321 11111111112222 444 77777654 46889998873211 1111111111222
Q ss_pred EEEeCCCCcEEEEEeCC-----CCEEEEeCCCC
Q 018322 326 ISWNRLASCLLASGSDD-----GTFSIHDLRLL 353 (358)
Q Consensus 326 i~~~p~~~~~lasgs~D-----g~i~iwDlr~~ 353 (358)
+.+ ++ .+++.|+.+ ..+.+||+.+.
T Consensus 244 ~~~--~~-~i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 244 AAV--GS-IVYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp EEE--TT-EEEEEECBCSSSBCCEEEEEETTTT
T ss_pred EEE--CC-EEEEEeCcCCCeeeeeEEEEcCCCC
Confidence 333 45 788888854 46888998764
No 333
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=77.03 E-value=34 Score=29.25 Aligned_cols=100 Identities=10% Similarity=0.208 Sum_probs=50.6
Q ss_pred eEEEEeCC------CcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEEC---------CCcEEEEECCC
Q 018322 244 RLVTGDCN------SCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSV---------DGHIAIWDTRV 308 (358)
Q Consensus 244 ~l~sgs~d------g~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~---------Dg~I~iwD~r~ 308 (358)
+++.|+.+ ..+.+||+.+ ..|..... +.........+.+ ++. +++.|+. -..+.+||+.+
T Consensus 104 iyv~GG~~~~~~~~~~~~~~d~~~-~~W~~~~~-~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~~~~yd~~~ 178 (306)
T 3ii7_A 104 IYTSGGSEVGNSALYLFECYDTRT-ESWHTKPS-MLTQRCSHGMVEA--NGL-IYVCGGSLGNNVSGRVLNSCEVYDPAT 178 (306)
T ss_dssp EEEECCBBTTBSCCCCEEEEETTT-TEEEEECC-CSSCCBSCEEEEE--TTE-EEEECCEESCTTTCEECCCEEEEETTT
T ss_pred EEEECCCCCCCcEeeeEEEEeCCC-CceEeCCC-CcCCcceeEEEEE--CCE-EEEECCCCCCCCcccccceEEEeCCCC
Confidence 66666654 4688899876 44542211 1111111112222 444 7777764 34588999987
Q ss_pred CCCeeEEEecC---CCCeEEEEEeCCCCcEEEEEeCC-----CCEEEEeCCCC
Q 018322 309 GKSALTSFKAH---NADVNVISWNRLASCLLASGSDD-----GTFSIHDLRLL 353 (358)
Q Consensus 309 ~~~~~~~~~~h---~~~V~~i~~~p~~~~~lasgs~D-----g~i~iwDlr~~ 353 (358)
... ..+... ...-..+.+ ++ .+++.|+.+ ..+.+||+.+.
T Consensus 179 ~~W--~~~~~~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~~~~yd~~~~ 226 (306)
T 3ii7_A 179 ETW--TELCPMIEARKNHGLVFV--KD-KIFAVGGQNGLGGLDNVEYYDIKLN 226 (306)
T ss_dssp TEE--EEECCCSSCCBSCEEEEE--TT-EEEEECCEETTEEBCCEEEEETTTT
T ss_pred CeE--EECCCccchhhcceEEEE--CC-EEEEEeCCCCCCCCceEEEeeCCCC
Confidence 421 122111 111122222 45 677887754 35888998764
No 334
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=74.43 E-value=40 Score=28.75 Aligned_cols=102 Identities=14% Similarity=0.146 Sum_probs=50.6
Q ss_pred eEEEEeCCC-----cEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECC-------CcEEEEECCCCCC
Q 018322 244 RLVTGDCNS-----CIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVD-------GHIAIWDTRVGKS 311 (358)
Q Consensus 244 ~l~sgs~dg-----~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~D-------g~I~iwD~r~~~~ 311 (358)
+++.|+.++ .+.+||+.+ ..|.... .+.........+.+ ++. +++.|+.+ ..+.+||+.+...
T Consensus 111 iyv~GG~~~~~~~~~~~~~d~~~-~~W~~~~-~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~~yd~~~~~W 185 (302)
T 2xn4_A 111 LYAVGGFDGSTGLSSVEAYNIKS-NEWFHVA-PMNTRRSSVGVGVV--GGL-LYAVGGYDVASRQCLSTVECYNATTNEW 185 (302)
T ss_dssp EEEEEEECSSCEEEEEEEEETTT-TEEEEEC-CCSSCCBSCEEEEE--TTE-EEEECCEETTTTEECCCEEEEETTTTEE
T ss_pred EEEEcCCCCCccCceEEEEeCCC-CeEeecC-CCCCcccCceEEEE--CCE-EEEEeCCCCCCCccccEEEEEeCCCCcE
Confidence 666666443 577888866 4454221 11111111112222 344 77777653 3588999887321
Q ss_pred eeE-EEecCCCCeEEEEEeCCCCcEEEEEeCC-----CCEEEEeCCCC
Q 018322 312 ALT-SFKAHNADVNVISWNRLASCLLASGSDD-----GTFSIHDLRLL 353 (358)
Q Consensus 312 ~~~-~~~~h~~~V~~i~~~p~~~~~lasgs~D-----g~i~iwDlr~~ 353 (358)
... .+.........+.+ ++ .+++.|+.+ ..+.+||+.+.
T Consensus 186 ~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~~ 230 (302)
T 2xn4_A 186 TYIAEMSTRRSGAGVGVL--NN-LLYAVGGHDGPLVRKSVEVYDPTTN 230 (302)
T ss_dssp EEECCCSSCCBSCEEEEE--TT-EEEEECCBSSSSBCCCEEEEETTTT
T ss_pred EECCCCccccccccEEEE--CC-EEEEECCCCCCcccceEEEEeCCCC
Confidence 111 11111111122222 45 788888764 36889998764
No 335
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=73.88 E-value=30 Score=34.19 Aligned_cols=110 Identities=10% Similarity=0.099 Sum_probs=58.5
Q ss_pred CCCCeEEEEeCC------CcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCC--cEEEEECCCCCC
Q 018322 240 ITTGRLVTGDCN------SCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDG--HIAIWDTRVGKS 311 (358)
Q Consensus 240 ~~~~~l~sgs~d------g~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg--~I~iwD~r~~~~ 311 (358)
.+. +++.|+.+ ..+.+||+.+ ..|.... ........ .+++.-.++. +++.|+.++ .+.+||+.+...
T Consensus 451 ~~~-lyv~GG~~~~~~~~~dv~~yd~~t-~~W~~~~-~~p~~R~~-h~~~~~~~~~-iyv~GG~~~~~~v~~yd~~t~~W 525 (695)
T 2zwa_A 451 NNQ-LLLIGGRKAPHQGLSDNWIFDMKT-REWSMIK-SLSHTRFR-HSACSLPDGN-VLILGGVTEGPAMLLYNVTEEIF 525 (695)
T ss_dssp TTE-EEEECCBSSTTCBCCCCEEEETTT-TEEEECC-CCSBCCBS-CEEEECTTSC-EEEECCBCSSCSEEEEETTTTEE
T ss_pred CCE-EEEEcCCCCCCCccccEEEEeCCC-CcEEECC-CCCCCccc-ceEEEEcCCE-EEEECCCCCCCCEEEEECCCCce
Confidence 444 66666643 3578888876 4554321 11111111 1222223555 888888755 799999987421
Q ss_pred eeEE----EecCCCCeEEEEEeCCCCcEEEEEeC--C-----CCEEEEeCCCCC
Q 018322 312 ALTS----FKAHNADVNVISWNRLASCLLASGSD--D-----GTFSIHDLRLLK 354 (358)
Q Consensus 312 ~~~~----~~~h~~~V~~i~~~p~~~~~lasgs~--D-----g~i~iwDlr~~~ 354 (358)
.... .........++.++.....+++.||. + ..+.+||+.+.+
T Consensus 526 ~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 526 KDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp EECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred EEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 1111 10111122335566552278888876 2 358889987765
No 336
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=69.37 E-value=54 Score=28.15 Aligned_cols=100 Identities=13% Similarity=0.182 Sum_probs=51.5
Q ss_pred eEEEEeC------CCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCC-----cEEEEECCCCCCe
Q 018322 244 RLVTGDC------NSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDG-----HIAIWDTRVGKSA 312 (358)
Q Consensus 244 ~l~sgs~------dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg-----~I~iwD~r~~~~~ 312 (358)
+++.|+. -..+.+||+.+ ..|.... ...........+.+ ++. +++.|+.++ .+.+||+.+...
T Consensus 151 iyv~GG~~~~~~~~~~~~~yd~~~-~~W~~~~-~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~yd~~~~~W- 224 (315)
T 4asc_A 151 VYVIGGKGSDRKCLNKMCVYDPKK-FEWKELA-PMQTARSLFGATVH--DGR-IIVAAGVTDTGLTSSAEVYSITDNKW- 224 (315)
T ss_dssp EEEECCBCTTSCBCCCEEEEETTT-TEEEECC-CCSSCCBSCEEEEE--TTE-EEEEEEECSSSEEEEEEEEETTTTEE-
T ss_pred EEEEeCCCCCCcccceEEEEeCCC-CeEEECC-CCCCchhceEEEEE--CCE-EEEEeccCCCCccceEEEEECCCCeE-
Confidence 5666665 24688999876 4554322 11111111122222 444 888887654 588899987421
Q ss_pred eEEEec---CCCCeEEEEEeCCCCcEEEEEeCCC--------------CEEEEeCCCC
Q 018322 313 LTSFKA---HNADVNVISWNRLASCLLASGSDDG--------------TFSIHDLRLL 353 (358)
Q Consensus 313 ~~~~~~---h~~~V~~i~~~p~~~~~lasgs~Dg--------------~i~iwDlr~~ 353 (358)
..+.. .......+.+ ++ .+++.|+.++ .+.+||+.+.
T Consensus 225 -~~~~~~p~~r~~~~~~~~--~~-~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 278 (315)
T 4asc_A 225 -APFEAFPQERSSLSLVSL--VG-TLYAIGGFATLETESGELVPTELNDIWRYNEEEK 278 (315)
T ss_dssp -EEECCCSSCCBSCEEEEE--TT-EEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTT
T ss_pred -EECCCCCCcccceeEEEE--CC-EEEEECCccccCcCCccccccccCcEEEecCCCC
Confidence 11211 1111122222 44 7788877632 3678888764
No 337
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=68.90 E-value=11 Score=36.25 Aligned_cols=75 Identities=4% Similarity=-0.093 Sum_probs=54.5
Q ss_pred CcEEEEEECCCCCCEEEEEECCCcEEEEECCCC-----------CCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCE
Q 018322 277 ASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVG-----------KSALTSFKAHNADVNVISWNRLASCLLASGSDDGTF 345 (358)
Q Consensus 277 ~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~-----------~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i 345 (358)
.+...+..+|+|.+++++|--+.++.++|++.- ...+.....-.......+|.+.| +...|---|.+|
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G-~aYTtlfidSqv 401 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRG-NAYTTLFIDSQV 401 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSS-EEEEEETTTTEE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCC-ceEeeeeecceE
Confidence 344568899999988888888999999999841 11112111234456778999999 777788889999
Q ss_pred EEEeCCC
Q 018322 346 SIHDLRL 352 (358)
Q Consensus 346 ~iwDlr~ 352 (358)
.-|++..
T Consensus 402 vkWni~~ 408 (638)
T 3sbq_A 402 VKWNMEE 408 (638)
T ss_dssp EEEEHHH
T ss_pred EEEeccH
Confidence 9999853
No 338
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=68.06 E-value=1e+02 Score=30.85 Aligned_cols=156 Identities=14% Similarity=0.201 Sum_probs=77.5
Q ss_pred CCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcC----CCCCeEEEEeCCC
Q 018322 165 QGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGG----HKDEGYAIDWNPI 240 (358)
Q Consensus 165 ~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----h~~~v~~l~~s~~ 240 (358)
.+.|.+|.++|.++.++..++..+.|...+=.. .. .+++..... ....+.+|++.|.
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG--~t-----------------W~~~~~~~~~~~~~~~~i~~ia~dp~ 74 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDAGT--SK-----------------WIPLNDFIEAQDMNIMGTESIALDPN 74 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETTT--TE-----------------EEESCTTCCGGGGGGCSEEEEEEETT
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecCCC--CC-----------------eeECccCCCcccccCCceeEEEECCC
Confidence 478999999998766777777777665443211 11 111110000 1246889999886
Q ss_pred CCCeEEEEeCCCc----EEEEecCCCC-CcccCCCccc--c---CCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCC
Q 018322 241 TTGRLVTGDCNSC----IYLWEPASDA-TWNVDPNPFI--G---HSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGK 310 (358)
Q Consensus 241 ~~~~l~sgs~dg~----I~lwd~~~~~-~~~~~~~~~~--~---h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~ 310 (358)
..+.++.+..... -.||-....+ .|......+. + ....+..|+++|.....+..+...+. ||-...+.
T Consensus 75 ~~~~i~~~~g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~g--l~~S~DgG 152 (789)
T 1sqj_A 75 NPDRLYLAQGRYVGDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEG--IWKSSDRA 152 (789)
T ss_dssp EEEEEEEEECSCTTSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSC--EEEESSTT
T ss_pred CCCEEEEEeCccCCCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCC--EEEECCCC
Confidence 5445555442211 3344333323 3432111111 0 01135678888875545655654443 33333322
Q ss_pred CeeEEEe------cCCCCeEEEEEeCCCCcEEEEEeC
Q 018322 311 SALTSFK------AHNADVNVISWNRLASCLLASGSD 341 (358)
Q Consensus 311 ~~~~~~~------~h~~~V~~i~~~p~~~~~lasgs~ 341 (358)
..-..+. .....+..|.++|..+..|+.+..
T Consensus 153 ~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~ 189 (789)
T 1sqj_A 153 KTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASAT 189 (789)
T ss_dssp SSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEES
T ss_pred cccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEc
Confidence 2111121 112457889998865444544444
No 339
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=65.97 E-value=64 Score=27.67 Aligned_cols=105 Identities=16% Similarity=0.157 Sum_probs=54.4
Q ss_pred ceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCeEE
Q 018322 167 CVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLV 246 (358)
Q Consensus 167 ~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~l~ 246 (358)
.|..|+.-... .++. . +|.|+.|-....... ..|.. ....|..++..... .++
T Consensus 25 ~i~~ia~G~~h--~~~l-~-~G~v~~wG~n~~Gql-----------------g~p~~----~~~~i~~ia~G~~h--s~~ 77 (282)
T 3qhy_B 25 GVDAIAGGYFH--GLAL-K-GGKVLGWGANLNGQL-----------------TMPAA----TQSGVDAIAAGNYH--SLA 77 (282)
T ss_dssp SCCEEEECSSE--EEEE-E-TTEEEEEECCSSSTT-----------------SCCGG----GGSCCCEEEECSSE--EEE
T ss_pred CCcEEEeCCCe--EEEE-E-CCEEEEEeCCCCCCC-----------------CCCcc----CCCCEEEEEeCCCE--EEE
Confidence 45566554433 4444 4 899999987652211 11110 01245555554433 233
Q ss_pred EEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCC
Q 018322 247 TGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRV 308 (358)
Q Consensus 247 sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~ 308 (358)
. . ||.|+.|-....++.-.+ ..+ ...|..|+..... .+.-. +|.|..|-...
T Consensus 78 l-~-~G~v~~wG~n~~Gqlg~P-~~~---~~~v~~ia~G~~h---s~al~-~G~v~~wG~n~ 129 (282)
T 3qhy_B 78 L-K-DGEVIAWGGNEDGQTTVP-AEA---RSGVDAIAAGAWA---SYALK-DGKVIAWGDDS 129 (282)
T ss_dssp E-E-TTEEEEEECCTTSTTCCC-GGG---SSSEEEEEEETTE---EEEEE-TTEEEEEECCT
T ss_pred E-E-CCEEEEeeCCCCCCCCCC-ccc---CCCeEEEECcCCE---EEEEe-CCeEEEecCCC
Confidence 3 4 788888876654443211 111 2457777765443 22333 88888886654
No 340
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=63.61 E-value=71 Score=27.37 Aligned_cols=144 Identities=19% Similarity=0.172 Sum_probs=76.3
Q ss_pred ceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCeEE
Q 018322 167 CVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRLV 246 (358)
Q Consensus 167 ~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~l~ 246 (358)
.|..|..-... .+|. . +|.|+.|-....... ..+. .....|..++...... .++
T Consensus 103 ~v~~ia~G~~h--s~al-~-~G~v~~wG~n~~gql-----------------g~~~----~~~~~i~~i~~G~~~~-~~l 156 (282)
T 3qhy_B 103 GVDAIAAGAWA--SYAL-K-DGKVIAWGDDSDGQT-----------------TVPA----EAQSGVTALDGGVYTA-LAV 156 (282)
T ss_dssp SEEEEEEETTE--EEEE-E-TTEEEEEECCTTSTT-----------------SCCG----GGGSSEEEEEECSSEE-EEE
T ss_pred CeEEEECcCCE--EEEE-e-CCeEEEecCCCCCcC-----------------CCCc----cCCCCeEEEEcccCEE-EEE
Confidence 56666655443 3333 4 899999977652110 0111 0113466666554332 222
Q ss_pred EEeCCCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEecCCCCeEEE
Q 018322 247 TGDCNSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHNADVNVI 326 (358)
Q Consensus 247 sgs~dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~~~V~~i 326 (358)
. +|.|+.|-....++... +.. -...|..|+.-..+ .++. .+|.|..|-.....+.-.. ......|..|
T Consensus 157 --~-~G~v~~wG~n~~gqlg~---p~~-~~~~v~~i~~G~~h--s~al--~~G~v~~wG~n~~gqlg~p-~~~~~~v~~i 224 (282)
T 3qhy_B 157 --K-NGGVIAWGDNYFGQTTV---PAE-AQSGVDDVAGGIFH--SLAL--KDGKVIAWGDNRYKQTTVP-TEALSGVSAI 224 (282)
T ss_dssp --E-TTEEEEEECCTTSTTSC---CGG-GGSSEEEEEECSSE--EEEE--ETTEEEEEECCTTSTTCCC-GGGGSSCCEE
T ss_pred --E-CCEEEEecCCCCCCCCC---cee-cCCCeEEEEecCCE--EEEE--ECCeEEEEECCCCCCCCCC-cccCCCceEE
Confidence 3 68999998765444321 111 13568888765544 3444 5999999976553221111 1112346677
Q ss_pred EEeCCCCcEEEEEeCCCCEEEEeCCC
Q 018322 327 SWNRLASCLLASGSDDGTFSIHDLRL 352 (358)
Q Consensus 327 ~~~p~~~~~lasgs~Dg~i~iwDlr~ 352 (358)
+..... .++++ ||.|..|=...
T Consensus 225 ~~G~~h-~~al~---~g~v~~wG~n~ 246 (282)
T 3qhy_B 225 ASGEWY-SLALK---NGKVIAWGSSR 246 (282)
T ss_dssp EECSSC-EEEEE---TTEEEEESTTC
T ss_pred EcCCCE-EEEEE---CCEEEEecCCC
Confidence 665544 33333 88898885443
No 341
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=60.89 E-value=80 Score=27.08 Aligned_cols=102 Identities=13% Similarity=0.207 Sum_probs=50.3
Q ss_pred eEEEEeC------CCcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECC-----CcEEEEECCCCCCe
Q 018322 244 RLVTGDC------NSCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVD-----GHIAIWDTRVGKSA 312 (358)
Q Consensus 244 ~l~sgs~------dg~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~D-----g~I~iwD~r~~~~~ 312 (358)
+++.|+. -..+.+||+.+ ..|.... ...........+.+ ++. +++.|+.+ ..+.+||+.+....
T Consensus 161 iyv~GG~~~~~~~~~~~~~yd~~~-~~W~~~~-~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~yd~~~~~W~ 235 (318)
T 2woz_A 161 IYCLGGKTDDKKCTNRVFIYNPKK-GDWKDLA-PMKTPRSMFGVAIH--KGK-IVIAGGVTEDGLSASVEAFDLKTNKWE 235 (318)
T ss_dssp EEEECCEESSSCBCCCEEEEETTT-TEEEEEC-CCSSCCBSCEEEEE--TTE-EEEEEEEETTEEEEEEEEEETTTCCEE
T ss_pred EEEEcCCCCCCCccceEEEEcCCC-CEEEECC-CCCCCcccceEEEE--CCE-EEEEcCcCCCCccceEEEEECCCCeEE
Confidence 5566653 24588999876 4554321 11111111122222 344 77777754 35778998874311
Q ss_pred e-EEEecCCCCeEEEEEeCCCCcEEEEEeCC--------------CCEEEEeCCCC
Q 018322 313 L-TSFKAHNADVNVISWNRLASCLLASGSDD--------------GTFSIHDLRLL 353 (358)
Q Consensus 313 ~-~~~~~h~~~V~~i~~~p~~~~~lasgs~D--------------g~i~iwDlr~~ 353 (358)
. ..+.........+.+ ++ .+++.|+.+ ..+.+||+.+.
T Consensus 236 ~~~~~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 288 (318)
T 2woz_A 236 VMTEFPQERSSISLVSL--AG-SLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKK 288 (318)
T ss_dssp ECCCCSSCCBSCEEEEE--TT-EEEEECCBCCBC----CCBCCBCCCEEEEETTTT
T ss_pred ECCCCCCcccceEEEEE--CC-EEEEECCeeccCCCCceeccceeeeEEEEeCCCC
Confidence 1 111111111122222 34 677887754 35788888764
No 342
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=59.66 E-value=37 Score=35.03 Aligned_cols=37 Identities=14% Similarity=0.230 Sum_probs=28.9
Q ss_pred cEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEE
Q 018322 278 SVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSF 316 (358)
Q Consensus 278 ~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~ 316 (358)
.+.++...++.. ++++.+.|+++|+|++.++ +++.+.
T Consensus 237 ~~~~~~~~~~~~-~lftl~~D~~LRiWsl~t~-~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYN-VLVMLSLDYKLKVLDLSTN-QCVETI 273 (950)
T ss_dssp CEEEEEEETTTT-EEEEEETTCEEEEEETTTT-EEEEEE
T ss_pred eEEEEeecCCCc-EEEEEECCCEEEEEECCCC-CeEeee
Confidence 566777777766 8899999999999999984 455443
No 343
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=59.36 E-value=44 Score=29.78 Aligned_cols=26 Identities=12% Similarity=0.109 Sum_probs=21.5
Q ss_pred EEEEEECCCcEEEEECCCCCCeeEEEe
Q 018322 291 VFASCSVDGHIAIWDTRVGKSALTSFK 317 (358)
Q Consensus 291 ~las~s~Dg~I~iwD~r~~~~~~~~~~ 317 (358)
.+++|+.+|.+...|++++ +.+..+.
T Consensus 113 ~Vy~Gs~~g~l~ald~~tG-~~~W~~~ 138 (339)
T 2be1_A 113 KVYTGSMRTIMYTINMLNG-EIISAFG 138 (339)
T ss_dssp EEEECEEEEEEEEEETTTC-CEEEEES
T ss_pred EEEEEecCCEEEEEECCCC-cEEEEEe
Confidence 7889999999999999996 4666653
No 344
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=59.21 E-value=97 Score=31.88 Aligned_cols=31 Identities=6% Similarity=-0.025 Sum_probs=26.1
Q ss_pred CeEEEEeCCCCCCeEEEEeCCCcEEEEecCCC
Q 018322 231 EGYAIDWNPITTGRLVTGDCNSCIYLWEPASD 262 (358)
Q Consensus 231 ~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~ 262 (358)
.+.++...++.. ++++-+.|+++++|++.++
T Consensus 237 ~~~~~~~~~~~~-~lftl~~D~~LRiWsl~t~ 267 (950)
T 4gq2_M 237 TIISMIFLSTYN-VLVMLSLDYKLKVLDLSTN 267 (950)
T ss_dssp CEEEEEEETTTT-EEEEEETTCEEEEEETTTT
T ss_pred eEEEEeecCCCc-EEEEEECCCEEEEEECCCC
Confidence 566777777776 9999999999999999874
No 345
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=58.50 E-value=1e+02 Score=27.50 Aligned_cols=109 Identities=11% Similarity=0.140 Sum_probs=54.4
Q ss_pred CeEEEEeCCCC-CCeEEEEeCCCcEEEEecCCCCCcccCCCccc----------------cCCCcEEEEEECCCCCCEEE
Q 018322 231 EGYAIDWNPIT-TGRLVTGDCNSCIYLWEPASDATWNVDPNPFI----------------GHSASVEDLQWSPTEPDVFA 293 (358)
Q Consensus 231 ~v~~l~~s~~~-~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~----------------~h~~~V~~v~~sp~~~~~la 293 (358)
.|.+|++.|.. .+.|..+...+.|...+- .+..|... .... .....|.+|.++|.....+.
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~ggl~~S~D-gG~tW~~~-~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~ 193 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSPQGLFRSTD-HGASWEPV-AGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLY 193 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEETTEEEEESS-TTSBCEEC-HHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEE
T ss_pred ceeEEEeCCCCCCCEEEEEecCCcEEEEcC-CCCCeEEC-cCccCCccccccccccccCCCCCCceeEEEECCCCCCEEE
Confidence 57889998753 446666665665554431 22334321 1110 12346889999985432344
Q ss_pred EEECCCcEEEEECCCCCCeeEEEec-----C--------CCCeEEEEEeCCCCcEEEEEeCCC
Q 018322 294 SCSVDGHIAIWDTRVGKSALTSFKA-----H--------NADVNVISWNRLASCLLASGSDDG 343 (358)
Q Consensus 294 s~s~Dg~I~iwD~r~~~~~~~~~~~-----h--------~~~V~~i~~~p~~~~~lasgs~Dg 343 (358)
.+...+.|... ..+...-..+.. + ...+.+|.+.|..+..|..+...+
T Consensus 194 vg~~~ggl~~s--~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g 254 (394)
T 3b7f_A 194 IGMSSGGVFES--TDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG 254 (394)
T ss_dssp EEEETBEEEEE--SSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE
T ss_pred EEECCCCEEEE--CCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe
Confidence 44434434333 221111111110 0 134889999987435565565544
No 346
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=56.42 E-value=95 Score=26.54 Aligned_cols=94 Identities=7% Similarity=0.085 Sum_probs=47.0
Q ss_pred CcEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEEC------CCcEEEEECCCCCCe-eEEEecCCCCeE
Q 018322 252 SCIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSV------DGHIAIWDTRVGKSA-LTSFKAHNADVN 324 (358)
Q Consensus 252 g~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~------Dg~I~iwD~r~~~~~-~~~~~~h~~~V~ 324 (358)
..+.+||+.+ ..|.... .+.........+. .++. +++.|+. -..+.+||+.+.... +..+........
T Consensus 117 ~~~~~~d~~~-~~W~~~~-~~p~~r~~~~~~~--~~~~-iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~ 191 (315)
T 4asc_A 117 DSVMCYDRLS-FKWGESD-PLPYVVYGHTVLS--HMDL-VYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFG 191 (315)
T ss_dssp CCEEEEETTT-TEEEECC-CCSSCCBSCEEEE--ETTE-EEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCE
T ss_pred ceEEEECCCC-CcEeECC-CCCCcccceeEEE--ECCE-EEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceE
Confidence 4688899876 4454321 1111111111222 2344 7778776 246889998873211 111111111112
Q ss_pred EEEEeCCCCcEEEEEeCCC-----CEEEEeCCCC
Q 018322 325 VISWNRLASCLLASGSDDG-----TFSIHDLRLL 353 (358)
Q Consensus 325 ~i~~~p~~~~~lasgs~Dg-----~i~iwDlr~~ 353 (358)
++.+ ++ .+++.|+.++ .+.+||+.+.
T Consensus 192 ~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 192 ATVH--DG-RIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp EEEE--TT-EEEEEEEECSSSEEEEEEEEETTTT
T ss_pred EEEE--CC-EEEEEeccCCCCccceEEEEECCCC
Confidence 2222 45 7888887654 4788888764
No 347
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=54.88 E-value=1.1e+02 Score=26.69 Aligned_cols=52 Identities=15% Similarity=0.029 Sum_probs=24.3
Q ss_pred cEEEEECCCCCCeeE-EEecCCCCeEEEEEeCCCCcEEEEEeCCC------CEEEEeCCCCC
Q 018322 300 HIAIWDTRVGKSALT-SFKAHNADVNVISWNRLASCLLASGSDDG------TFSIHDLRLLK 354 (358)
Q Consensus 300 ~I~iwD~r~~~~~~~-~~~~h~~~V~~i~~~p~~~~~lasgs~Dg------~i~iwDlr~~~ 354 (358)
.+.+||+.+...... .+......-.++. -++ .+++.||.++ .|.++++++.+
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~-~i~v~GG~~~~~~~~~~v~~l~~~~~~ 344 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAYGVSLP--WNN-SLLIIGGETAGGKAVTDSVLITVKDNK 344 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBSSEEEE--ETT-EEEEEEEECGGGCEEEEEEEEEC-CCS
T ss_pred eEEEEecCCCceeeCCCCCCCcccceeEE--eCC-EEEEEeeeCCCCCEeeeEEEEEEcCcE
Confidence 577899987432211 1211111112222 345 7888888643 35555777654
No 348
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=54.75 E-value=34 Score=29.87 Aligned_cols=64 Identities=9% Similarity=-0.045 Sum_probs=32.8
Q ss_pred EECCCCCCEEEEEE--CC--CcEEEEECCCCCCeeEEEecCCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCC
Q 018322 283 QWSPTEPDVFASCS--VD--GHIAIWDTRVGKSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLL 353 (358)
Q Consensus 283 ~~sp~~~~~las~s--~D--g~I~iwD~r~~~~~~~~~~~h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~ 353 (358)
.|++.+. .|+-.. .+ ..|...++.. .....+..+.. .+|++.+..++.+.....+|..-++...
T Consensus 110 ~~s~~g~-~Iy~~~~~~~~~~~Iy~~~~dG--s~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~ 177 (302)
T 3s25_A 110 YASLIGN-YIYYLHYDTQTATSLYRIRIDG--EEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQ 177 (302)
T ss_dssp EEEEETT-EEEEEEESSSSCEEEEEEETTS--CCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTT
T ss_pred EEEEeCC-EEEEEeecCCCCceEEEEECCC--CCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCC
Confidence 5677777 555444 33 4455555543 22334444432 3456666344444333556777666543
No 349
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=53.56 E-value=1.7e+02 Score=28.70 Aligned_cols=152 Identities=11% Similarity=0.048 Sum_probs=79.9
Q ss_pred CceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCCCCCCeE
Q 018322 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNPITTGRL 245 (358)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~~l 245 (358)
..|++|....++ .|-.|+.+| +..||..... +. .+. ......|.++.. .. +.|
T Consensus 63 ~~i~~i~~d~~g--~lWigT~~G-l~~yd~~~~~--f~----------------~~~---~~~~~~i~~i~~-~~--g~l 115 (758)
T 3ott_A 63 TRIYCGVIIDNT--YLYMGTDNG-ILVYNYRADR--YE----------------QPE---TDFPTDVRTMAL-QG--DTL 115 (758)
T ss_dssp SCEEEEEEETTT--EEEEEETTE-EEEEETTTTE--EC----------------CCS---CCCCSCEEEEEE-ET--TEE
T ss_pred ceEEEEEEcCCC--cEEEEeCCC-eEEEeCCCCE--EE----------------Ccc---cCCCceEEEEEe-cC--CcE
Confidence 457777766666 455556655 7888876521 10 000 001224666654 23 367
Q ss_pred EEEeCCCcEEEEecCCCCCcccCCCccc-cCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEec------
Q 018322 246 VTGDCNSCIYLWEPASDATWNVDPNPFI-GHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKA------ 318 (358)
Q Consensus 246 ~sgs~dg~I~lwd~~~~~~~~~~~~~~~-~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~------ 318 (358)
..|+.+ -|..++..+. .......... .....|.++....++. +.+ |+.. -|..++.... ....+..
T Consensus 116 Wigt~~-Gl~~~~~~~~-~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWi-gt~~-Gl~~~~~~~~--~~~~~~~~~~~~~ 188 (758)
T 3ott_A 116 WLGALN-GLYTYQLQSR-KLTSFDTRRNGLPNNTIYSIIRTKDNQ-IYV-GTYN-GLCRYIPSNG--KFEGIPLPVHSSQ 188 (758)
T ss_dssp EEEETT-EEEEEETTTC-CEEEECHHHHCCSCSCEEEEEECTTCC-EEE-EETT-EEEEEETTTT--EEEEECCCCCTTC
T ss_pred EEEcCC-cceeEeCCCC-eEEEeccCCCCcCCCeEEEEEEcCCCC-EEE-EeCC-CHhhCccCCC--ceEEecCCCcccc
Confidence 677755 6788887652 2110000000 1134688888888777 544 4444 5777887653 2222211
Q ss_pred CCCCeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCC
Q 018322 319 HNADVNVISWNRLASCLLASGSDDGTFSIHDLRLL 353 (358)
Q Consensus 319 h~~~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~ 353 (358)
....|++|...+.+ ..|-.|.. +-|..+|..+.
T Consensus 189 ~~~~i~~i~~d~~~-~~lWigt~-~Gl~~~~~~~~ 221 (758)
T 3ott_A 189 SNLFVNSLLEDTTR-QCVWIGTE-GYLFQYFPSTG 221 (758)
T ss_dssp SSCCEEEEEEETTT-TEEEEEEE-EEEEEEETTTT
T ss_pred ccceeEEEEEECCC-CEEEEEEC-CCCeEEcCCCC
Confidence 12248888887766 43333433 34777776543
No 350
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=52.88 E-value=19 Score=32.22 Aligned_cols=106 Identities=11% Similarity=0.155 Sum_probs=56.1
Q ss_pred eEEEEeCCCcEEEEecCCCCC-cccCCCccccCCCcEEEEEE--CCCCCCEEEEE-ECCCcEEEEECCCCCCeeEEEec-
Q 018322 244 RLVTGDCNSCIYLWEPASDAT-WNVDPNPFIGHSASVEDLQW--SPTEPDVFASC-SVDGHIAIWDTRVGKSALTSFKA- 318 (358)
Q Consensus 244 ~l~sgs~dg~I~lwd~~~~~~-~~~~~~~~~~h~~~V~~v~~--sp~~~~~las~-s~Dg~I~iwD~r~~~~~~~~~~~- 318 (358)
+++.++.||.|+-+|..++.. |..... ...++....- .+.+..+++.. +.||.|..++..++. ....+..
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~----~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~-~~~~~~~~ 86 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEPE----NFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGL-QKLPLSIR 86 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECGG----GSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEE-EEEEEEHH
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCC----ccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCc-EEeeeccc
Confidence 788889999999998876422 221110 1111111110 01122244443 589999999987752 2222211
Q ss_pred ---CCCCeEE---EEE-eC----CCCcEEEEEeCCCCEEEEeCCCCCC
Q 018322 319 ---HNADVNV---ISW-NR----LASCLLASGSDDGTFSIHDLRLLKV 355 (358)
Q Consensus 319 ---h~~~V~~---i~~-~p----~~~~~lasgs~Dg~i~iwDlr~~~~ 355 (358)
..+++.. ... .+ .+ ..+++|+.+|.+.-.|+++++.
T Consensus 87 ~lv~~SP~~~~~~pvv~~~~~~~~~-g~Vy~Gs~~g~l~ald~~tG~~ 133 (339)
T 2be1_A 87 QLVSTSPLHLKTNIVVNDSGKIVED-EKVYTGSMRTIMYTINMLNGEI 133 (339)
T ss_dssp HHHTTCSEEEECC----------CC-EEEEECEEEEEEEEEETTTCCE
T ss_pred cceeccccccCCCceeecccccccC-CEEEEEecCCEEEEEECCCCcE
Confidence 1222221 000 00 23 4788899999999999988764
No 351
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=51.09 E-value=1.7e+02 Score=29.23 Aligned_cols=110 Identities=15% Similarity=0.151 Sum_probs=58.6
Q ss_pred CCeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCcccc---CCCcEEEEEECCCCCCEEEEEECCCc----EE
Q 018322 230 DEGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIG---HSASVEDLQWSPTEPDVFASCSVDGH----IA 302 (358)
Q Consensus 230 ~~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~---h~~~V~~v~~sp~~~~~las~s~Dg~----I~ 302 (358)
..|.+|+++|..++.++.+...+.|...+ ..+..|......... ....|.+|+++|.....+..+..... -.
T Consensus 15 g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~ 93 (789)
T 1sqj_A 15 GYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAA 93 (789)
T ss_dssp SCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCE
T ss_pred CcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccE
Confidence 48999999998777888888777765554 233345421111100 23579999999865434444432211 34
Q ss_pred EEECCCCCCeeEEEec---------CCCCeEEEEEeCCCCcEEEEEe
Q 018322 303 IWDTRVGKSALTSFKA---------HNADVNVISWNRLASCLLASGS 340 (358)
Q Consensus 303 iwD~r~~~~~~~~~~~---------h~~~V~~i~~~p~~~~~lasgs 340 (358)
||-...+...-..+.. ....+..|++.|..+..+..+.
T Consensus 94 v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~ 140 (789)
T 1sqj_A 94 FYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGT 140 (789)
T ss_dssp EEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEEC
T ss_pred EEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEe
Confidence 4433332221111110 0113566788876545555555
No 352
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=48.77 E-value=2.1e+02 Score=28.24 Aligned_cols=113 Identities=17% Similarity=0.203 Sum_probs=59.6
Q ss_pred CceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcC----CCCCeEEEEeCCCC
Q 018322 166 GCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGG----HKDEGYAIDWNPIT 241 (358)
Q Consensus 166 ~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----h~~~v~~l~~s~~~ 241 (358)
+.|..|.++|.++..+..+...|.|...+=.. ... .++....+ ....+.+|+++|..
T Consensus 23 g~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G--~tW-----------------~~i~~~~~~~~~~~~~i~~i~~dp~~ 83 (737)
T 2cn3_A 23 GFMPGIVFNETEKDLIYARAAIGGAYRWDPST--ETW-----------------IPLLDHFQMDEYSYYGVESIATDPVD 83 (737)
T ss_dssp SCCCEEEECSSSTTCEEEECSSSCEEEEETTT--TEE-----------------EECCTTCCGGGGGGGCEEEEEECSSS
T ss_pred ceeeEEEECCCCCCEEEEEecCCcEEEeCCCC--CCE-----------------EECcCccCcccccCCCcceEEeCCCC
Confidence 38999999998766666677667665554222 111 11100000 12358899999866
Q ss_pred CCeEEEEeCC-------CcEEEEecCCCC-CcccCCCccc--cC---CCcEEEEEECCCCCCEEEEEEC
Q 018322 242 TGRLVTGDCN-------SCIYLWEPASDA-TWNVDPNPFI--GH---SASVEDLQWSPTEPDVFASCSV 297 (358)
Q Consensus 242 ~~~l~sgs~d-------g~I~lwd~~~~~-~~~~~~~~~~--~h---~~~V~~v~~sp~~~~~las~s~ 297 (358)
.+.++.+... +...||-....+ .|......+. ++ ...+..|+++|.....+..+..
T Consensus 84 ~~~v~v~~~~~~~~~~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~ 152 (737)
T 2cn3_A 84 PNRVYIVAGMYTNDWLPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTR 152 (737)
T ss_dssp TTCEEEEECSCSSSSSCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECS
T ss_pred CCEEEEEecccccccccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeec
Confidence 5555554421 124555554433 3432111111 00 1235679999976556666653
No 353
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=46.12 E-value=1.4e+02 Score=25.46 Aligned_cols=91 Identities=12% Similarity=0.151 Sum_probs=43.8
Q ss_pred EEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECC-------CcEEEEECCCCCCeeEEEecCCCCe--E
Q 018322 254 IYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVD-------GHIAIWDTRVGKSALTSFKAHNADV--N 324 (358)
Q Consensus 254 I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~D-------g~I~iwD~r~~~~~~~~~~~h~~~V--~ 324 (358)
+.+||+.+ ..|.... .+.........+.+ ++. +++.|+.+ ..+.+||+.+... ..+..-.... .
T Consensus 80 ~~~~d~~~-~~W~~~~-~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~~yd~~~~~W--~~~~~~p~~r~~~ 152 (318)
T 2woz_A 80 FFQLDNVS-SEWVGLP-PLPSARCLFGLGEV--DDK-IYVVAGKDLQTEASLDSVLCYDPVAAKW--SEVKNLPIKVYGH 152 (318)
T ss_dssp EEEEETTT-TEEEECS-CBSSCBCSCEEEEE--TTE-EEEEEEEBTTTCCEEEEEEEEETTTTEE--EEECCCSSCEESC
T ss_pred EEEEeCCC-CcEEECC-CCCccccccceEEE--CCE-EEEEcCccCCCCcccceEEEEeCCCCCE--eECCCCCCccccc
Confidence 77888865 4554321 11111111112222 344 77777764 3578889876321 1111100000 1
Q ss_pred EEEEeCCCCcEEEEEeC------CCCEEEEeCCCC
Q 018322 325 VISWNRLASCLLASGSD------DGTFSIHDLRLL 353 (358)
Q Consensus 325 ~i~~~p~~~~~lasgs~------Dg~i~iwDlr~~ 353 (358)
+++. .++ .+++.|+. -..+.+||+.+.
T Consensus 153 ~~~~-~~~-~iyv~GG~~~~~~~~~~~~~yd~~~~ 185 (318)
T 2woz_A 153 NVIS-HNG-MIYCLGGKTDDKKCTNRVFIYNPKKG 185 (318)
T ss_dssp EEEE-ETT-EEEEECCEESSSCBCCCEEEEETTTT
T ss_pred EEEE-ECC-EEEEEcCCCCCCCccceEEEEcCCCC
Confidence 1122 345 67777764 235888998764
No 354
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=45.25 E-value=1.6e+02 Score=26.04 Aligned_cols=115 Identities=11% Similarity=0.110 Sum_probs=55.8
Q ss_pred CeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCcccc-CCCcEEEEEECCCCCCEEEEEEC-----------C
Q 018322 231 EGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIG-HSASVEDLQWSPTEPDVFASCSV-----------D 298 (358)
Q Consensus 231 ~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~-h~~~V~~v~~sp~~~~~las~s~-----------D 298 (358)
.+.+|.+.|...+.|..+...+ |...+- .+..|......+.. -...+.+|.++|.....+..+.. +
T Consensus 233 ~~~~i~~~~~~~~~l~vg~~~g-l~~s~D-~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~ 310 (394)
T 3b7f_A 233 DPHCVVQHPAAPDILYQQNHCG-IYRMDR-REGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPG 310 (394)
T ss_dssp CEEEEEECSSSTTEEEEEETTE-EEEEET-TTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCC
T ss_pred ceeEEEECCCCCCEEEEEcCCe-EEEeCC-CCCcceECCCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCC
Confidence 5889999997655777777544 444332 22334321111111 01345678888754334444432 3
Q ss_pred CcEEEEECCCCCCeeEEEe-cCCC-------CeEEEEEeCCCCcEEEEEeCCCCEEE
Q 018322 299 GHIAIWDTRVGKSALTSFK-AHNA-------DVNVISWNRLASCLLASGSDDGTFSI 347 (358)
Q Consensus 299 g~I~iwD~r~~~~~~~~~~-~h~~-------~V~~i~~~p~~~~~lasgs~Dg~i~i 347 (358)
+...||..+.+...-..+. .-.. ....++++|..+..|+.++..+.|..
T Consensus 311 ~~~~~~~S~DgG~tW~~~~~glp~~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~l~~ 367 (394)
T 3b7f_A 311 GKPAVYVTRDAGESWQRQDRGLPTDQAWLTVKRQAMTADAHAPVGVYFGTTGGEIWA 367 (394)
T ss_dssp SSCCEEEESSTTSCCEEECBTSCCSSCCCCCCTBSEEECCSSSCCEEEECTTSCEEE
T ss_pred CceeEEEECCCCCCceECCCCCCCccccceEEEEEEEECCCCCCEEEEEeCCCeEEE
Confidence 3455665554322222221 1010 11357888764344555655555543
No 355
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=38.13 E-value=95 Score=30.02 Aligned_cols=92 Identities=9% Similarity=-0.050 Sum_probs=58.7
Q ss_pred EEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcCCCCCeEEEEeCC
Q 018322 160 RKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGGHKDEGYAIDWNP 239 (358)
Q Consensus 160 ~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~ 239 (358)
..++-......+.++|+|..++++|--+.+|.++|+......+...-. . ....+..-..-.-.....+|.+
T Consensus 317 ~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~-~--------~~~~~~ae~e~GlGPlHt~Fd~ 387 (638)
T 3sbq_A 317 RYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLA-D--------PRDVIVGEPELGLGPLHTTFDG 387 (638)
T ss_dssp EEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCS-C--------GGGGEEECCBCCSCEEEEEECS
T ss_pred EEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhcccc-C--------cccceEeeccCCCcccEEEECC
Confidence 344555666788999999888888888999999999874332211000 0 0011111011123456788998
Q ss_pred CCCCeEEEEeCCCcEEEEecCC
Q 018322 240 ITTGRLVTGDCNSCIYLWEPAS 261 (358)
Q Consensus 240 ~~~~~l~sgs~dg~I~lwd~~~ 261 (358)
.|. -..|-.-|..|.-|++..
T Consensus 388 ~G~-aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 388 RGN-AYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp SSE-EEEEETTTTEEEEEEHHH
T ss_pred CCc-eEeeeeecceEEEEeccH
Confidence 884 666777899999999864
No 356
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=37.45 E-value=3.2e+02 Score=27.09 Aligned_cols=171 Identities=11% Similarity=0.081 Sum_probs=81.1
Q ss_pred EEEEecCCCceeEEEEcCCCCcEEEEEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcC---CCCCeEE
Q 018322 158 QLRKVAHQGCVNRIRAMTQNPHICASWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGG---HKDEGYA 234 (358)
Q Consensus 158 ~~~~~~H~~~V~~i~~~p~~~~~lat~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---h~~~v~~ 234 (358)
....++-.+.|.+|.+.|.++.++..+...|.|.... ........... ......+.. ....+.+
T Consensus 13 ~~~~~g~~g~i~~i~~~p~~~~~~y~~~~~ggv~~S~--DgG~tW~~~~~-----------~~~~~~~~~~~~~~~~~~~ 79 (763)
T 3a0f_A 13 KPVTISGGGFISGLVAHPTEKDLIYARTDIGGTYRWN--AAKWEWEPITD-----------FIINNALAGNGANLLGTES 79 (763)
T ss_dssp EECSCCBCSCEEEEEECSSSTTCEEEEESSSCEEEEE--TTTTEEEESCT-----------TCBTTCSSSCCCCCCSEEE
T ss_pred EeeEecCCCceeEEEeCCCCCCEEEEEeccCcEEEEC--CCCCCeeECcc-----------CccccccCCCcccccceeE
Confidence 3444566789999999999877777777667654332 21111111000 000000000 1235889
Q ss_pred EEeCCCCCCeEEEEeCC-----CcEEEEecCC-CCCcccCCCcccc--C-C--CcEEEEEECCCCCCEEEEEECCCcEEE
Q 018322 235 IDWNPITTGRLVTGDCN-----SCIYLWEPAS-DATWNVDPNPFIG--H-S--ASVEDLQWSPTEPDVFASCSVDGHIAI 303 (358)
Q Consensus 235 l~~s~~~~~~l~sgs~d-----g~I~lwd~~~-~~~~~~~~~~~~~--h-~--~~V~~v~~sp~~~~~las~s~Dg~I~i 303 (358)
|+++|...+.++.+... ....||-... +..|......+.. . . .....|+++|.....+..+...+.|
T Consensus 80 ia~dp~~~~~~~~~~g~~~~~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~~~~l-- 157 (763)
T 3a0f_A 80 IALDPHNPDRLYLAQGDYVQWDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSRTQGL-- 157 (763)
T ss_dssp EECCTTCTTCEEEEECSCTTTCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECSSSCE--
T ss_pred EEECCCCCCEEEEEecccccCCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeCCCcE--
Confidence 99998654455544321 1234444433 3344422111110 0 1 1124688888754455555544433
Q ss_pred EECCCCCCeeEEEe------cCCCCeEEEEEeCCCCcEEEEEeCCC
Q 018322 304 WDTRVGKSALTSFK------AHNADVNVISWNRLASCLLASGSDDG 343 (358)
Q Consensus 304 wD~r~~~~~~~~~~------~h~~~V~~i~~~p~~~~~lasgs~Dg 343 (358)
|-...+...-..+. .....+..|.++|..+..++.+..++
T Consensus 158 ~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~ 203 (763)
T 3a0f_A 158 WRSTDRAQTWSRMNQLPDSSTYGIGIISVIFDPKNVGTAYVASHAV 203 (763)
T ss_dssp EEESSTTSSCEECTTSCCCSCTTTCEEEEEECSSSTTCEEEEESST
T ss_pred EEECCCCcCccccccCcccCCCccceEEEEECCCCCCEEEEEEeCC
Confidence 32332222111111 01134778899886544455554444
No 357
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=36.30 E-value=3.2e+02 Score=26.85 Aligned_cols=108 Identities=16% Similarity=0.170 Sum_probs=58.8
Q ss_pred CeEEEEeCCCCCCeEEEEeCCCcEEEEecCCCCCcccCCCcccc----CCCcEEEEEECCCCCC-EEEEEECC------C
Q 018322 231 EGYAIDWNPITTGRLVTGDCNSCIYLWEPASDATWNVDPNPFIG----HSASVEDLQWSPTEPD-VFASCSVD------G 299 (358)
Q Consensus 231 ~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~----h~~~V~~v~~sp~~~~-~las~s~D------g 299 (358)
.|.+|+++|..++.++.+...+.|..++- .+..|.... ...+ ....|.+|+++|..+. +++..+.. +
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D-~G~tW~~i~-~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~ 101 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDP-STETWIPLL-DHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPN 101 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEET-TTTEEEECC-TTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCC-CCCCEEECc-CccCcccccCCCcceEEeCCCCCCEEEEEecccccccccC
Confidence 78899999987767877776676655542 233444211 1111 1246999999996543 44444320 1
Q ss_pred cEEEEECCCCCCeeEEEe-cC--------CCCeEEEEEeCCCCcEEEEEe
Q 018322 300 HIAIWDTRVGKSALTSFK-AH--------NADVNVISWNRLASCLLASGS 340 (358)
Q Consensus 300 ~I~iwD~r~~~~~~~~~~-~h--------~~~V~~i~~~p~~~~~lasgs 340 (358)
...||-...+...-..+. .. ...+..|+++|..+..|+.+.
T Consensus 102 ~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~ 151 (737)
T 2cn3_A 102 MGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGT 151 (737)
T ss_dssp CCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEEC
T ss_pred CccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEee
Confidence 245555444322111111 11 012467899987655666555
No 358
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=28.05 E-value=4.3e+02 Score=25.76 Aligned_cols=147 Identities=12% Similarity=0.177 Sum_probs=72.2
Q ss_pred ceeEEEEcCCCCcEEE-EEeCCCcEEEEeCCCCccccccccccccCCCCCCCCCCCcEEEcC----CCCCeEEEEeCCCC
Q 018322 167 CVNRIRAMTQNPHICA-SWADTGHVQVWDLRSHLNALAESETIVGQGAPQVSNQSPLVKFGG----HKDEGYAIDWNPIT 241 (358)
Q Consensus 167 ~V~~i~~~p~~~~~la-t~s~dg~V~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----h~~~v~~l~~s~~~ 241 (358)
.|++|...+++ .+-+ .++. +-|..+|..... ...+.. ....+.++.-...+
T Consensus 473 ~i~~i~~d~~g-~lWi~~~t~-~Gl~~~d~~~~~----------------------~~~~~~~~~~~~~~~~~i~~d~~g 528 (758)
T 3ott_A 473 FINQIIPDNEG-NVWVLLYNN-KGIDKINPRTRE----------------------VTKLFADELTGEKSPNYLLCDEDG 528 (758)
T ss_dssp CEEEEEECTTS-CEEEEETTC-SSEEEEETTTTE----------------------EEEECTTTSCGGGCEEEEEECTTS
T ss_pred eeeeEEEcCCC-CEEEEccCC-CCcEEEeCCCCc----------------------eEEecCCCcCCCcccceEEECCCC
Confidence 47777777777 4444 2344 447777765411 111110 01346677666655
Q ss_pred CCeEEEEeCCCcEEEEecCCCCCcccCCCcccc-CCCcEEEEEECCCCCCEEEEEECCCcEEEEECCCCCCeeEEEecCC
Q 018322 242 TGRLVTGDCNSCIYLWEPASDATWNVDPNPFIG-HSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRVGKSALTSFKAHN 320 (358)
Q Consensus 242 ~~~l~sgs~dg~I~lwd~~~~~~~~~~~~~~~~-h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~~~~~~~~~~~h~ 320 (358)
.|..|+.. -+..++..+..... . ...+ ....|.++... ++. +. .++..| |..+|..+.. +..+....
T Consensus 529 --~lWigt~~-Gl~~~~~~~~~~~~--~-~~~gl~~~~i~~i~~~-~g~-lW-i~t~~G-l~~~~~~~~~--~~~~~~~~ 596 (758)
T 3ott_A 529 --LLWVGFHG-GVMRINPKDESQQS--I-SFGSFSNNEILSMTCV-KNS-IW-VSTTNG-LWIIDRKTMD--ARQQNMTN 596 (758)
T ss_dssp --CEEEEETT-EEEEECC--CCCCB--C-CCCC---CCEEEEEEE-TTE-EE-EEESSC-EEEEETTTCC--EEEC--CC
T ss_pred --CEEEEecC-ceEEEecCCCceEE--e-cccCCCccceEEEEEC-CCC-EE-EECCCC-eEEEcCCCce--eEEecCCC
Confidence 45556655 48888876532111 0 1111 12457777764 554 44 444555 6777887632 22222222
Q ss_pred CCeEEEEEe-CCCCcEEEEEeCCCCEEEEeCCC
Q 018322 321 ADVNVISWN-RLASCLLASGSDDGTFSIHDLRL 352 (358)
Q Consensus 321 ~~V~~i~~~-p~~~~~lasgs~Dg~i~iwDlr~ 352 (358)
..++...+. ++| .|..|+.+| +..++...
T Consensus 597 ~~~~~~~~~~~~G--~l~fG~~~G-l~~f~p~~ 626 (758)
T 3ott_A 597 KRFTSLLFDPKED--CVYLGGADG-FGISHSNL 626 (758)
T ss_dssp CCCSEEEEETTTT--EEEEECBSE-EEEEEC--
T ss_pred CceeeeEEECCCC--cEEEecCCc-eEEEChhh
Confidence 234444444 455 566677777 44556654
No 359
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=27.31 E-value=3e+02 Score=23.64 Aligned_cols=64 Identities=11% Similarity=0.139 Sum_probs=33.1
Q ss_pred EEeCCCCCCeEEEEe--CCC--cEEEEecCCCCCcccCCCccccCCCcEEEEEECCCCCCEEEEEECCCcEEEEECCC
Q 018322 235 IDWNPITTGRLVTGD--CNS--CIYLWEPASDATWNVDPNPFIGHSASVEDLQWSPTEPDVFASCSVDGHIAIWDTRV 308 (358)
Q Consensus 235 l~~s~~~~~~l~sgs--~dg--~I~lwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~las~s~Dg~I~iwD~r~ 308 (358)
..|++.+. +|+-.+ .++ .|+.-++..... ..+..+.. ..|+|.+..++.+......|...++..
T Consensus 109 ~~~s~~g~-~Iy~~~~~~~~~~~Iy~~~~dGs~~-----~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g 176 (302)
T 3s25_A 109 IYASLIGN-YIYYLHYDTQTATSLYRIRIDGEEK-----KKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTAS 176 (302)
T ss_dssp EEEEEETT-EEEEEEESSSSCEEEEEEETTSCCC-----EEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTT
T ss_pred cEEEEeCC-EEEEEeecCCCCceEEEEECCCCCe-----EEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCC
Confidence 36677776 666544 333 444445432211 22333322 345677774444444356777777765
No 360
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=26.46 E-value=36 Score=35.91 Aligned_cols=32 Identities=16% Similarity=0.036 Sum_probs=25.6
Q ss_pred CeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 322 DVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 322 ~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
.+.+++..++. .++++-+.|+++|||++.+++
T Consensus 239 ~~vs~~~~~~~-~~lftL~~D~~LRiWsl~t~~ 270 (1139)
T 4fhn_B 239 TIISMIFLSTY-NVLVMLSLDYKLKVLDLSTNQ 270 (1139)
T ss_dssp CBSCCEEETTT-TEEEEEBTTCEEEEEETTTTE
T ss_pred eeEEeeccCCc-cEEEEEeCCCEEEEEECCCCC
Confidence 34455666766 789999999999999998874
No 361
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=26.22 E-value=3.2e+02 Score=26.31 Aligned_cols=62 Identities=13% Similarity=0.136 Sum_probs=37.8
Q ss_pred CcEEEEEECCCCCCEEE-EEEC-----------CCcEEEEECCCCCCeeEEEec-CCCCeEEEEEeCCCCcEEEEEe
Q 018322 277 ASVEDLQWSPTEPDVFA-SCSV-----------DGHIAIWDTRVGKSALTSFKA-HNADVNVISWNRLASCLLASGS 340 (358)
Q Consensus 277 ~~V~~v~~sp~~~~~la-s~s~-----------Dg~I~iwD~r~~~~~~~~~~~-h~~~V~~i~~~p~~~~~lasgs 340 (358)
.....|.|.+++. +.+ +-.. ...|..++..++. ....+.. ....++.++|+|++..++++..
T Consensus 476 nsPDnL~fd~~G~-LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGe-l~~fl~~P~~aEpnGiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 476 NSPDGLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPATGE-IRRFMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp CCEEEEEECTTCC-EEEEECCCCCCSGGGTTCCSCEEEEECTTTCC-EEEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred CCCCceEECCCCC-EEEEeCCCcCccccccccCCceEEEEeCCCCe-EEEEEeCCCCccccCCEECCCCCEEEEEEe
Confidence 5678899999997 554 3221 1146666665542 2222232 3467899999999955555543
No 362
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=25.99 E-value=1.1e+02 Score=32.30 Aligned_cols=31 Identities=6% Similarity=-0.025 Sum_probs=24.7
Q ss_pred CeEEEEeCCCCCCeEEEEeCCCcEEEEecCCC
Q 018322 231 EGYAIDWNPITTGRLVTGDCNSCIYLWEPASD 262 (358)
Q Consensus 231 ~v~~l~~s~~~~~~l~sgs~dg~I~lwd~~~~ 262 (358)
.+.+++..++.. ++++-+.|+++++|++.++
T Consensus 239 ~~vs~~~~~~~~-~lftL~~D~~LRiWsl~t~ 269 (1139)
T 4fhn_B 239 TIISMIFLSTYN-VLVMLSLDYKLKVLDLSTN 269 (1139)
T ss_dssp CBSCCEEETTTT-EEEEEBTTCEEEEEETTTT
T ss_pred eeEEeeccCCcc-EEEEEeCCCEEEEEECCCC
Confidence 445566666666 8999999999999999874
No 363
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=25.17 E-value=66 Score=31.91 Aligned_cols=30 Identities=13% Similarity=0.151 Sum_probs=23.6
Q ss_pred CeEEEEEeCCCCcEEEEEeCCCCEEEEeCCCCC
Q 018322 322 DVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 354 (358)
Q Consensus 322 ~V~~i~~~p~~~~~lasgs~Dg~i~iwDlr~~~ 354 (358)
.|.++.+. . .++++-+.|.++|+|++++++
T Consensus 223 ~Is~~~~~--~-~fLftL~~Dh~LRiWsL~t~~ 252 (729)
T 3f7f_A 223 VISCKLFH--E-RYLIVLTQNCHLKIWDLTSFT 252 (729)
T ss_dssp EEEEEEET--T-TEEEEEETTCEEEEEETTTTE
T ss_pred eEEEeccC--C-cEEEEEEcCCeEEEEEcCCCc
Confidence 35555543 4 689999999999999999875
No 364
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=24.63 E-value=3.3e+02 Score=23.34 Aligned_cols=92 Identities=10% Similarity=0.141 Sum_probs=43.8
Q ss_pred eEEEEeC-CCcEEEEecCC-CCCcccCCCccc-cCCCcEEEEEECCCCCCEEEEEEC-C---------CcEEEEECCCCC
Q 018322 244 RLVTGDC-NSCIYLWEPAS-DATWNVDPNPFI-GHSASVEDLQWSPTEPDVFASCSV-D---------GHIAIWDTRVGK 310 (358)
Q Consensus 244 ~l~sgs~-dg~I~lwd~~~-~~~~~~~~~~~~-~h~~~V~~v~~sp~~~~~las~s~-D---------g~I~iwD~r~~~ 310 (358)
+++.|+. ...+.+||+.. ...|.... .+. ........+.+ ++. +++.|+. + ..+.+||+.+..
T Consensus 22 iyv~GG~~~~~~~~~d~~~~~~~W~~~~-~~p~~~R~~~~~~~~--~~~-lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~ 97 (357)
T 2uvk_A 22 VYIGLGSAGTAWYKLDTQAKDKKWTALA-AFPGGPRDQATSAFI--DGN-LYVFGGIGKNSEGLTQVFNDVHKYNPKTNS 97 (357)
T ss_dssp EEEECGGGTTCEEEEETTSSSCCEEECC-CCTTCCCBSCEEEEE--TTE-EEEECCEEECTTSCEEECCCEEEEETTTTE
T ss_pred EEEEeCcCCCeEEEEccccCCCCeeECC-CCCCCcCccceEEEE--CCE-EEEEcCCCCCCCccceeeccEEEEeCCCCc
Confidence 5555553 34788889863 24554321 122 11111112222 344 7777775 2 468899998732
Q ss_pred Ce-eEEEe-cCCCCeEEEEEeCCCCcEEEEEeCC
Q 018322 311 SA-LTSFK-AHNADVNVISWNRLASCLLASGSDD 342 (358)
Q Consensus 311 ~~-~~~~~-~h~~~V~~i~~~p~~~~~lasgs~D 342 (358)
.. +.... .......++. .++ .+++.|+.+
T Consensus 98 W~~~~~~~p~~r~~~~~~~--~~~-~iyv~GG~~ 128 (357)
T 2uvk_A 98 WVKLMSHAPMGMAGHVTFV--HNG-KAYVTGGVN 128 (357)
T ss_dssp EEECSCCCSSCCSSEEEEE--ETT-EEEEEECCC
T ss_pred EEECCCCCCcccccceEEE--ECC-EEEEEeCcC
Confidence 11 11111 1111112222 345 788888865
No 365
>2loj_A Putative cytoplasmic protein; pathogenic bacterial protein, PSI-biology, northeast structu genomics consortium (NESG); NMR {Salmonella enterica subsp}
Probab=21.97 E-value=86 Score=20.26 Aligned_cols=23 Identities=13% Similarity=0.190 Sum_probs=19.0
Q ss_pred EEecCCCceeEEEEcCCCCcEEEE
Q 018322 160 RKVAHQGCVNRIRAMTQNPHICAS 183 (358)
Q Consensus 160 ~~~~H~~~V~~i~~~p~~~~~lat 183 (358)
..+.|.|.+++++....| .+|.|
T Consensus 40 v~I~H~G~~Y~LR~Tr~G-KLILT 62 (63)
T 2loj_A 40 VIIDHNGQEYLLRKTQAG-KLLLT 62 (63)
T ss_dssp EEEEETTEEEEEEEETTT-EEEEE
T ss_pred EEEEeCCeEEEeEEccCC-ceeec
Confidence 456799999999999988 67665
No 366
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=21.16 E-value=4.9e+02 Score=23.96 Aligned_cols=30 Identities=7% Similarity=-0.032 Sum_probs=21.9
Q ss_pred CceeEEEEcCCCC-cEEEEEeCCCcEEEEeCC
Q 018322 166 GCVNRIRAMTQNP-HICASWADTGHVQVWDLR 196 (358)
Q Consensus 166 ~~V~~i~~~p~~~-~~lat~s~dg~V~iwd~~ 196 (358)
..-+.|.|.|++. +++++ ...|.|++++..
T Consensus 14 ~~P~~~a~~pdG~~rl~V~-er~G~i~~~~~~ 44 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFIL-EKEGYVKILTPE 44 (463)
T ss_dssp SSEEEEECCSSSSCCEEEE-ETTTEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEE-eCCceEEEEeCC
Confidence 4457889999984 36655 678999999754
No 367
>2jra_A Protein RPA2121; domain-swapped dimer, structural genomics, PSI, protein STRU initiative, northeast structural genomics consortium; NMR {Rhodopseudomonas palustris}
Probab=20.39 E-value=1e+02 Score=20.10 Aligned_cols=23 Identities=26% Similarity=0.304 Sum_probs=19.1
Q ss_pred EEecCCCceeEEEEcCCCCcEEEE
Q 018322 160 RKVAHQGCVNRIRAMTQNPHICAS 183 (358)
Q Consensus 160 ~~~~H~~~V~~i~~~p~~~~~lat 183 (358)
..+.|.|.+++++....| ++|.|
T Consensus 44 v~I~H~G~~Y~LR~Tr~G-KLILT 66 (67)
T 2jra_A 44 IVIAHGDDRYRLRLTSQN-KLILT 66 (67)
T ss_dssp EEEEETTEEEEEEECTTS-CEEEE
T ss_pred EEEEeCCeEEEeEEccCC-ceeec
Confidence 456799999999999998 67765
Done!