Query 018324
Match_columns 358
No_of_seqs 73 out of 75
Neff 3.6
Searched_HMMs 13730
Date Mon Mar 25 13:28:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018324.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/018324hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2e74e1 f.23.24.1 (E:1-32) Pet 51.5 6.2 0.00045 24.7 3.0 28 39-66 2-29 (32)
2 d1pzqa_ a.34.3.1 (A:) Erythron 45.3 7.9 0.00058 27.4 3.1 48 244-320 2-49 (60)
3 d1st6a5 a.24.9.1 (A:489-646) V 41.9 84 0.0061 25.5 10.0 92 218-322 49-155 (158)
4 d1uklc_ a.38.1.1 (C:) SREBP-2 33.8 46 0.0033 22.5 5.8 36 203-238 23-58 (61)
5 d1jb0i_ f.23.17.1 (I:) Subunit 30.8 7 0.00051 25.6 0.8 18 56-73 7-24 (38)
6 d1nh2d1 a.32.1.1 (D:5-54) Smal 18.9 19 0.0014 24.8 1.2 38 103-152 1-38 (50)
7 d2es4d1 a.137.15.1 (D:53-332) 16.0 2.7E+02 0.019 22.5 9.5 97 251-348 159-263 (280)
8 d1v54k_ f.23.5.1 (K:) Mitochon 15.4 37 0.0027 23.2 2.0 33 39-71 13-45 (49)
9 d1am9a_ a.38.1.1 (A:) SREBP-1a 14.6 1E+02 0.0073 21.5 4.4 37 205-241 42-78 (80)
10 d1st6a3 a.24.9.1 (A:253-371) V 12.1 1.6E+02 0.012 22.8 5.3 31 220-250 67-97 (119)
No 1
>d2e74e1 f.23.24.1 (E:1-32) PetL subunit of the cytochrome b6f complex {Mastigocladus laminosus [TaxId: 83541]}
Probab=51.50 E-value=6.2 Score=24.70 Aligned_cols=28 Identities=29% Similarity=0.509 Sum_probs=22.7
Q ss_pred chhhHHHHHHHHHHHHHHHhhhhhhccc
Q 018324 39 IFGSVVYCFVLAGYAILAAGTTWIFHPI 66 (358)
Q Consensus 39 ~~g~~~y~~~L~~yA~~~~~~pw~~~~~ 66 (358)
+.|+++|.+..+-|-+.+++.-|....+
T Consensus 2 ilgavfyivfialffgiavgiifaiksi 29 (32)
T d2e74e1 2 ILGAVFYIVFIALFFGIAVGIIFAIKSI 29 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred eeeeeHHHHHHHHHHHHHhhheeeEEEE
Confidence 6799999999998888888877766554
No 2
>d1pzqa_ a.34.3.1 (A:) Erythronolide synthase {Saccharopolyspora erythraea [TaxId: 1836]}
Probab=45.33 E-value=7.9 Score=27.36 Aligned_cols=48 Identities=31% Similarity=0.570 Sum_probs=35.1
Q ss_pred CCCCchhhHHhhhhhchhHHhhhHHHHHhHHHHHHHHHhhhhHhHHHHHHHHhhhhhhhhHhHHHHHHHhhhhhhHH
Q 018324 244 DGSTPQVDLAHLLAARDQELRTLSAEMNQLQSELRLARSFVAEREAEVLRVRNTNNQYVEENERLRAILGEWSTRAA 320 (358)
Q Consensus 244 ~g~t~qvdl~h~la~r~qelRa~~Ae~~q~~~el~~ar~li~er~~e~~~~r~~n~q~~eEn~rlRa~l~Ews~raa 320 (358)
..+.|.||+-..|+-=|.-|-||++| +-+-+-.+||-+.|..|..|-+
T Consensus 2 sa~~p~v~ig~rld~le~al~al~~~-----------------------------~gh~dvg~rle~llrrw~srr~ 49 (60)
T d1pzqa_ 2 SAASPAVDIGDRLDELEKALEALSAE-----------------------------DGHDDVGQRLESLLRRWNSRRA 49 (60)
T ss_dssp CSCCSCSTTHHHHHHHHHHHHHHTTS-----------------------------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCCCcchhhhHHHHHHHHHhcchh-----------------------------hcccHHHHHHHHHHHHHhccCC
Confidence 45689999988888777777777776 2344456788889999977743
No 3
>d1st6a5 a.24.9.1 (A:489-646) Vinculin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=41.89 E-value=84 Score=25.53 Aligned_cols=92 Identities=17% Similarity=0.254 Sum_probs=58.3
Q ss_pred HHHHhHHhhHHHHHHHHHhhhhcccCCCCCchh-hHHhhhhhchhHHhhhHHHHHhHHHHHHHH------HhhhhHhHHH
Q 018324 218 QRENLHFLSEEILRLQECLSKYEQSDDGSTPQV-DLAHLLAARDQELRTLSAEMNQLQSELRLA------RSFVAEREAE 290 (358)
Q Consensus 218 LkdHNa~LSkrIL~Lq~~l~kye~~~~g~t~qv-dl~h~la~r~qelRa~~Ae~~q~~~el~~a------r~li~er~~e 290 (358)
.+++.-.+-.+|-+|..+|+...+.+-|+||+- +++--+.. .++.|++-++.| -+++|-...=
T Consensus 49 ~r~~Il~~C~el~~l~~~LadLr~~G~G~sPeA~~lA~qi~~----------kL~dL~~~v~~Avv~~v~d~f~dt~tpl 118 (158)
T d1st6a5 49 YRQDLLAKCDRVDQLAAQLADLAARGEGESPQARAIAAQLQD----------SLKDLKARMQEAMTQEVSDVFSDTTTPI 118 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSTTSSCCSSHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHSSCSSHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHhhhhHH
Confidence 467788888899999999999999999999986 34433333 344444433332 2445555444
Q ss_pred HHHHHhh--------hhhhhhHhHHHHHHHhhhhhhHHHH
Q 018324 291 VLRVRNT--------NNQYVEENERLRAILGEWSTRAAKL 322 (358)
Q Consensus 291 ~~~~r~~--------n~q~~eEn~rlRa~l~Ews~raakl 322 (358)
.+-+... +.+=.+|+.+ .+.+++.|.++.
T Consensus 119 ~~l~~Aa~a~~~~p~re~~~~e~a~---~f~~~a~~~~~~ 155 (158)
T d1st6a5 119 KLLAVAATAPSDTPNREEVFEERAA---NFENHAARLGAT 155 (158)
T ss_dssp HHHHHHHHSCSCSSCHHHHHHHHHH---HHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCccHHHHHHHH---HHHHHHHHHHHH
Confidence 4444332 3345556553 788888887754
No 4
>d1uklc_ a.38.1.1 (C:) SREBP-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.84 E-value=46 Score=22.49 Aligned_cols=36 Identities=17% Similarity=0.217 Sum_probs=32.2
Q ss_pred CCCchhHhhHHHHHHHHHHhHHhhHHHHHHHHHhhh
Q 018324 203 DGGRLSDEQMALLQYQRENLHFLSEEILRLQECLSK 238 (358)
Q Consensus 203 d~g~LlEKQADLIrYLkdHNa~LSkrIL~Lq~~l~k 238 (358)
+.+.++++=.|-|++|+..+..|.++...|+.+..+
T Consensus 23 ~Ka~iL~~Ai~YI~~Lq~~~~~L~~e~~~L~~~~~~ 58 (61)
T d1uklc_ 23 HKSGVLRKAIDYIKYLQQVNHKLRQENMVLKLANQK 58 (61)
T ss_dssp CTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456799999999999999999999999999988754
No 5
>d1jb0i_ f.23.17.1 (I:) Subunit VIII of photosystem I reaction centre, PsaI {Synechococcus elongatus [TaxId: 32046]}
Probab=30.79 E-value=7 Score=25.61 Aligned_cols=18 Identities=33% Similarity=0.635 Sum_probs=12.3
Q ss_pred HHhhhhhhccccccchhH
Q 018324 56 AAGTTWIFHPIHYLIPPL 73 (358)
Q Consensus 56 ~~~~pw~~~~~~~~~~sl 73 (358)
+.+.||||.|+-...-|.
T Consensus 7 AsyLPwI~iPvv~wl~p~ 24 (38)
T d1jb0i_ 7 ASFLPWIFIPVVCWLMPT 24 (38)
T ss_dssp TTTHHHHHHHHHHTHHHH
T ss_pred HHhcchhHHHHHHHHHHH
Confidence 567899999875444443
No 6
>d1nh2d1 a.32.1.1 (D:5-54) Small chain TOA2, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=18.92 E-value=19 Score=24.81 Aligned_cols=38 Identities=16% Similarity=0.308 Sum_probs=22.8
Q ss_pred hHHHHHHHhhcccccchhhhhHHHHHHHHHHHHhhccccccHHHHHHHHH
Q 018324 103 GYYSFSQKLKHIVRLPFAITAYGTAAMLLVIVWRPHISILSISTLLRIIM 152 (358)
Q Consensus 103 GYl~FYR~Tr~lkRlPl~IvSlGNa~LLLI~~~~~~~~~Ls~~~lLriil 152 (358)
||+++||.| ++|++..=.+=-+..+ +.++|..-++++.
T Consensus 1 ~yYelYR~s-----------tlG~~L~dtLDeli~~-~~I~p~LA~kVL~ 38 (50)
T d1nh2d1 1 GYYELYRRS-----------TIGNSLVDALDTLISD-GRIEASLAMRVLE 38 (50)
T ss_dssp CCCCGGGGS-----------HHHHHHHHHHHHHHHT-TSSCHHHHHHHHH
T ss_pred ChHHHHhcc-----------hHHHHHHHHHHHHHHc-CCCCHHHHHHHHH
Confidence 688899887 6787764333222221 5677776665443
No 7
>d2es4d1 a.137.15.1 (D:53-332) Lipase chaperone LifO (LipB) {Burkholderia glumae [TaxId: 337]}
Probab=15.99 E-value=2.7e+02 Score=22.54 Aligned_cols=97 Identities=15% Similarity=0.142 Sum_probs=51.2
Q ss_pred hHHhhhhhchhHHhhhHHHHHhHHHHHHHHHhhhhHhHHHHHHHHhhhhh-----hhhHhHHHHHHHhhhhhhHHHHHHH
Q 018324 251 DLAHLLAARDQELRTLSAEMNQLQSELRLARSFVAEREAEVLRVRNTNNQ-----YVEENERLRAILGEWSTRAAKLERA 325 (358)
Q Consensus 251 dl~h~la~r~qelRa~~Ae~~q~~~el~~ar~li~er~~e~~~~r~~n~q-----~~eEn~rlRa~l~Ews~raakle~a 325 (358)
-++.+-+..+++.+....+..+.+...+....+..+..++- ..+....+ -.+..+.+..--.+|..|-..+...
T Consensus 159 ~l~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~e~a~rl~~~~~~~~~~~~r~~~~~~~ 237 (280)
T d2es4d1 159 RLAALDAQLTPDERAQQAALHAQQDAVTKIADLQKAGATPD-QMRAQIAQTLGPEAAARAAQMQQDDEAWQTRYQAYAAE 237 (280)
T ss_dssp HHHHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHH-HHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555555555666555555555544444333333222221 11221111 1222233445567777776665544
Q ss_pred H---HHhhhccHHHHHHHHHhhhcCC
Q 018324 326 L---EVERMSNIELQKKISTRRNQHG 348 (358)
Q Consensus 326 l---e~er~~~~~~~~~~~~~r~~~~ 348 (358)
. +...++-.+-++.+..+|.+..
T Consensus 238 r~~i~~~~l~~~~~~~~l~~lr~q~f 263 (280)
T d2es4d1 238 RDRIAAQGLAPQDRDARIAQLRQQTF 263 (280)
T ss_dssp HHHHHTTCCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHh
Confidence 3 4566777888889999998873
No 8
>d1v54k_ f.23.5.1 (K:) Mitochondrial cytochrome c oxidase subunit VIIb {Cow (Bos taurus) [TaxId: 9913]}
Probab=15.45 E-value=37 Score=23.19 Aligned_cols=33 Identities=18% Similarity=0.473 Sum_probs=28.0
Q ss_pred chhhHHHHHHHHHHHHHHHhhhhhhccccccch
Q 018324 39 IFGSVVYCFVLAGYAILAAGTTWIFHPIHYLIP 71 (358)
Q Consensus 39 ~~g~~~y~~~L~~yA~~~~~~pw~~~~~~~~~~ 71 (358)
++||..+|+-.-+|.+.-.+.-|-+.|+-...|
T Consensus 13 L~~Ga~fc~avW~yv~TQ~gI~WnlSPVGrVtP 45 (49)
T d1v54k_ 13 LASGATFCVAVWVYMATQIGIEWNPSPVGRVTP 45 (49)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCCCCCCCTTTCCC
T ss_pred Eecccchhhhhhhheeeeeeeeecccccccccc
Confidence 578999999999999999999999988865554
No 9
>d1am9a_ a.38.1.1 (A:) SREBP-1a {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.59 E-value=1e+02 Score=21.51 Aligned_cols=37 Identities=14% Similarity=0.258 Sum_probs=32.8
Q ss_pred CchhHhhHHHHHHHHHHhHHhhHHHHHHHHHhhhhcc
Q 018324 205 GRLSDEQMALLQYQRENLHFLSEEILRLQECLSKYEQ 241 (358)
Q Consensus 205 g~LlEKQADLIrYLkdHNa~LSkrIL~Lq~~l~kye~ 241 (358)
+.++++=.+.|.+|++.+..|.++...|+..+.+.+.
T Consensus 42 ~~iL~~a~~yI~~L~~~~~~L~~e~~~lk~~~~~~~~ 78 (80)
T d1am9a_ 42 SAVLRKAIDYIRFLQHSNQKLKQENLSLRTAVHKSKS 78 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh
Confidence 3599999999999999999999999999988876543
No 10
>d1st6a3 a.24.9.1 (A:253-371) Vinculin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=12.14 E-value=1.6e+02 Score=22.83 Aligned_cols=31 Identities=13% Similarity=0.253 Sum_probs=24.7
Q ss_pred HHhHHhhHHHHHHHHHhhhhcccCCCCCchh
Q 018324 220 ENLHFLSEEILRLQECLSKYEQSDDGSTPQV 250 (358)
Q Consensus 220 dHNa~LSkrIL~Lq~~l~kye~~~~g~t~qv 250 (358)
+.+-.+-.+|=.|..+|+...+.+-|+||+-
T Consensus 67 ~~Il~~c~ei~~lt~qLadLr~~G~G~sPeA 97 (119)
T d1st6a3 67 REILGTCKTLGQMTDQLADLRARGQGATPMA 97 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTTCCCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCCHHH
Confidence 4445556677788899999999999999984
Done!