Query 018326
Match_columns 358
No_of_seqs 132 out of 703
Neff 4.4
Searched_HMMs 46136
Date Fri Mar 29 08:03:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018326.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018326hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02455 fructose-bisphosphate 100.0 5E-159 1E-163 1154.2 35.0 358 1-358 1-358 (358)
2 PTZ00019 fructose-bisphosphate 100.0 3E-157 6E-162 1142.1 34.5 351 7-358 2-355 (355)
3 KOG1557 Fructose-biphosphate a 100.0 3E-156 6E-161 1116.4 31.7 355 4-358 8-363 (363)
4 PLN02227 fructose-bisphosphate 100.0 3E-155 6E-160 1136.9 33.8 350 5-358 49-399 (399)
5 PLN02425 probable fructose-bis 100.0 5E-154 1E-158 1127.0 34.2 351 4-358 39-390 (390)
6 cd00948 FBP_aldolase_I_a Fruct 100.0 4E-153 1E-157 1105.5 32.4 328 10-337 2-330 (330)
7 PF00274 Glycolytic: Fructose- 100.0 1E-147 3E-152 1080.7 28.6 347 11-358 1-348 (348)
8 cd00344 FBP_aldolase_I Fructos 100.0 8E-137 2E-141 996.3 31.6 325 10-334 2-328 (328)
9 COG3588 Fructose-1,6-bisphosph 100.0 3E-125 7E-130 899.3 23.3 328 10-338 3-331 (332)
10 PRK05377 fructose-1,6-bisphosp 100.0 2.6E-88 5.6E-93 645.2 21.9 247 19-305 9-271 (296)
11 cd00949 FBP_aldolase_I_bact Fr 100.0 7.4E-83 1.6E-87 606.9 19.8 244 19-305 6-268 (292)
12 PRK12399 tagatose 1,6-diphosph 97.7 0.0082 1.8E-07 60.0 21.2 270 21-329 13-305 (324)
13 PRK04161 tagatose 1,6-diphosph 97.2 0.066 1.4E-06 53.8 20.6 270 21-329 15-307 (329)
14 TIGR01232 lacD tagatose 1,6-di 97.2 0.092 2E-06 52.7 21.2 273 21-329 14-306 (325)
15 PRK12858 tagatose 1,6-diphosph 96.9 0.09 1.9E-06 52.9 18.8 272 18-329 12-306 (340)
16 cd00958 DhnA Class I fructose- 91.2 6.2 0.00014 36.6 13.3 151 126-323 78-231 (235)
17 PRK07226 fructose-bisphosphate 88.4 9.8 0.00021 36.5 12.6 155 125-327 94-252 (267)
18 TIGR01949 AroFGH_arch predicte 72.5 58 0.0013 31.0 11.4 151 128-326 94-247 (258)
19 PF01261 AP_endonuc_2: Xylose 56.0 78 0.0017 27.4 8.3 96 89-189 32-137 (213)
20 PF01791 DeoC: DeoC/LacD famil 50.6 62 0.0013 30.2 7.2 151 127-301 79-234 (236)
21 TIGR03821 AblA_like_1 lysine-2 43.4 58 0.0013 32.4 6.1 20 162-181 249-268 (321)
22 PF08742 C8: C8 domain; Inter 43.2 20 0.00043 27.6 2.2 21 160-180 44-64 (74)
23 cd00635 PLPDE_III_YBL036c_like 42.8 1.9E+02 0.0041 26.6 9.1 87 98-195 117-204 (222)
24 cd00532 MGS-like MGS-like doma 36.9 85 0.0019 26.1 5.3 84 6-98 8-100 (112)
25 smart00832 C8 C8 domain. This 36.6 28 0.0006 27.6 2.1 19 161-179 47-65 (76)
26 cd07941 DRE_TIM_LeuA3 Desulfob 29.8 4.7E+02 0.01 25.2 9.8 78 161-257 116-195 (273)
27 PRK06105 aminotransferase; Pro 28.9 5.7E+02 0.012 26.5 10.8 61 4-77 236-304 (460)
28 PF06258 Mito_fiss_Elm1: Mitoc 28.3 1.3E+02 0.0027 30.0 5.7 85 230-315 118-221 (311)
29 TIGR00676 fadh2 5,10-methylene 27.8 5.6E+02 0.012 24.7 12.0 160 8-188 13-194 (272)
30 TIGR03822 AblA_like_2 lysine-2 26.7 4.1E+02 0.0089 26.3 9.0 94 174-283 194-292 (321)
31 cd00537 MTHFR Methylenetetrahy 26.7 5.6E+02 0.012 24.4 11.5 227 5-270 10-264 (274)
32 PF06508 QueC: Queuosine biosy 26.5 38 0.00082 31.7 1.6 34 262-299 3-36 (209)
33 PRK14454 ribosomal RNA large s 26.2 94 0.002 31.4 4.4 61 221-282 110-175 (342)
34 PRK13398 3-deoxy-7-phosphohept 26.0 4.9E+02 0.011 25.4 9.2 200 7-245 38-254 (266)
35 PF10058 DUF2296: Predicted in 26.0 8.5 0.00018 29.1 -2.3 20 168-187 20-43 (54)
36 COG0603 Predicted PP-loop supe 25.4 64 0.0014 31.2 2.9 34 261-298 5-38 (222)
37 COG0703 AroK Shikimate kinase 25.3 1.9E+02 0.004 26.9 5.8 116 32-169 41-169 (172)
38 PRK13774 formimidoylglutamase; 24.5 2E+02 0.0043 28.4 6.3 86 98-197 47-135 (311)
39 COG0367 AsnB Asparagine syntha 23.9 1.6E+02 0.0035 31.6 5.9 45 239-283 211-255 (542)
40 PF13578 Methyltransf_24: Meth 23.9 31 0.00068 27.6 0.5 29 186-218 73-101 (106)
41 PRK06552 keto-hydroxyglutarate 23.8 2.6E+02 0.0057 26.3 6.7 53 217-279 68-127 (213)
42 TIGR01963 PHB_DH 3-hydroxybuty 23.5 3.3E+02 0.0071 24.3 7.1 34 237-271 220-254 (255)
43 PF09863 DUF2090: Uncharacteri 23.3 8.1E+02 0.018 25.0 14.7 189 73-314 89-288 (311)
44 COG0285 FolC Folylpolyglutamat 23.2 1.3E+02 0.0028 31.6 4.9 64 262-327 331-396 (427)
45 TIGR01227 hutG formimidoylglut 22.6 2.9E+02 0.0064 27.1 7.0 88 98-197 38-126 (307)
46 PF08821 CGGC: CGGC domain; I 22.1 68 0.0015 27.4 2.2 48 123-183 51-104 (107)
47 PRK15418 transcriptional regul 20.8 5.5E+02 0.012 25.6 8.6 90 166-279 46-135 (318)
48 KOG0681 Actin-related protein 20.2 98 0.0021 34.0 3.3 90 212-312 515-609 (645)
No 1
>PLN02455 fructose-bisphosphate aldolase
Probab=100.00 E-value=4.6e-159 Score=1154.19 Aligned_cols=358 Identities=89% Similarity=1.314 Sum_probs=349.3
Q ss_pred CCCcchhhHHHHHHHHHHhcCCCCceEeecCCCCChHHHhhhCCCCCccchHhhhhhhhcccCCcCCceeEEeecccccc
Q 018326 1 MSCFKGKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQYLSGVILFEETLY 80 (358)
Q Consensus 1 ~~~~~~~~~~eL~~ta~~~~a~gKGiLAaDES~gt~~Krl~~~Gvente~nrr~yR~~l~ttp~~~~~IsGvILfeETl~ 80 (358)
|..++.++++||.+||++|++|||||||||||+|||+|||+.|||||||||||.||++|||||+|++||||||||||||+
T Consensus 1 ~~~~~~~~~~eL~~tA~~iva~GKGiLAADES~gT~gKRl~~iGVente~nRr~yR~lLfttp~~~~~IsGvILfeETl~ 80 (358)
T PLN02455 1 MSAFVGKYADELIKNAKYIATPGKGILAADESTGTIGKRLASINVENVESNRQALRELLFTAPGALQYLSGVILFEETLY 80 (358)
T ss_pred CCcccHHHHHHHHHHHHHHhCCCCeeEEeccCCCchhhHHHhcCCCCchHHHHHHHHhhccCCcccccEEEEEcchHhcc
Confidence 56678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCccchHHHhhCCCcceeecCCccccccCCCCCcccCChhhHHHHHHHHhHcCCcceeeeeeeecCCCCchHHHHH
Q 018326 81 QKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAIN 160 (358)
Q Consensus 81 q~~~~G~~~~~~L~~~GIvpGIKvDkGl~~l~~~~ge~~t~GLD~L~~R~~~y~~~Ga~FaKWRsVi~i~~~~Ps~~aI~ 160 (358)
|+++||+||+|+|+++|||||||||||++|++|++||++|+|||||++||++||++|||||||||||+|++++||..||.
T Consensus 81 Q~~~dG~p~~~~L~~~GIvPGIKVDkGl~~l~g~~ge~~t~GLDgL~~R~~~y~~~GarFAKWRsVikI~~~~PS~~ai~ 160 (358)
T PLN02455 81 QKTSDGKPFVDVLKENGVLPGIKVDKGTVELAGTNGETTTQGLDGLGARCAKYYEAGARFAKWRAVLKIGPTEPSELAIQ 160 (358)
T ss_pred ccccCCcCHHHHHHHCCCeeeEEecCCccccCCCCCCccCcchHHHHHHHHHHHhcCCceeeceeeeecCCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCcceeecceecCCCCCChhhHHHHHHHHHHHHHHHhhcCCceeeccccccCCCCCCCCCCCCCH
Q 018326 161 ENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAPKVTP 240 (358)
Q Consensus 161 ~na~~LAryA~icQ~~GLVPIVEPEVl~dgdh~ie~~~~vt~~vl~~v~~~L~~~~V~Leg~lLKpnmv~pG~~~~~~~~ 240 (358)
+||+.|||||+|||++||||||||||||||||||++|++|||+||++||++|++|+|+|||||||||||+||++|.+.+|
T Consensus 161 ~na~~LArYA~icQ~~GlVPIVEPEvL~dGdH~i~~c~~Vte~Vl~~vf~aL~~~~V~lEG~LLKPnMV~pG~~~~~~s~ 240 (358)
T PLN02455 161 ENAQGLARYAIICQENGLVPIVEPEILVDGSHDIKKCAAVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSDSPKVSP 240 (358)
T ss_pred HHHHHHHHHHHHHHHcCCCceecccccCCCCCCHHHHHHHHHHHHHHHHHHHHHcCcccccceeccccccCCcccCcCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999944499
Q ss_pred HHHHHHHHHHhhccCCCCCceEEecCCCCCHHHHHHHHHHhcccCCCCCCeeEEeehhhhcHHHHHHhcCCcccHHHHHH
Q 018326 241 DVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQA 320 (358)
Q Consensus 241 ~evA~~Tv~~l~r~vP~aVpgVvFLSGG~s~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~~~l~~W~G~~~nv~~AQ~ 320 (358)
++||++||++|+|||||+||||+|||||||+||||.||||||+++.++||.||||||||||+++||+|+||++|+++||+
T Consensus 241 e~vA~~Tv~~l~rtVP~avpGI~FLSGGqSeeeAt~~LnamN~~~~~~PW~LsFSygRALQ~s~lk~W~Gk~eNv~aaQ~ 320 (358)
T PLN02455 241 EVIAEYTVRALQRTVPPAVPGIVFLSGGQSEEEATLNLNAMNKLKTLKPWTLSFSFGRALQQSTLKAWAGKKENVAKAQA 320 (358)
T ss_pred HHHHHHHHHHHHhhCCccCCcceecCCCCcHHHHHHHHHHHhcCCCCCCceeccchhHhhCHHHHHHcCCChhhHHHHHH
Confidence 99999999999999999999999999999999999999999998877899999999999999999999999999999999
Q ss_pred HHHHHHHhcchhhcCCccCCCCCCcccccccccccccC
Q 018326 321 AFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 358 (358)
Q Consensus 321 ~l~~ra~~n~~A~~G~y~~~~~~~~~~~~~l~~~~~~y 358 (358)
+|++||++|++|++|+|.+++..+..+.+|||+++|+|
T Consensus 321 ~l~~ra~~N~~A~~G~y~~~~~~~~~~~~sl~~~~~~y 358 (358)
T PLN02455 321 AFLVRCKANSEATLGKYKGDAAGGEGASESLHVKDYKY 358 (358)
T ss_pred HHHHHHHhcchhhcCCCCCCCCcccccccceeeccccC
Confidence 99999999999999999988754456789999999998
No 2
>PTZ00019 fructose-bisphosphate aldolase; Provisional
Probab=100.00 E-value=2.7e-157 Score=1142.14 Aligned_cols=351 Identities=69% Similarity=1.045 Sum_probs=344.4
Q ss_pred hhHHHHHHHHHHhcCCCCceEeecCCCCChHHHhhhCCCCCccchHhhhhhhhcccCCcCCceeEEeeccccccccccCC
Q 018326 7 KYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQYLSGVILFEETLYQKTAAG 86 (358)
Q Consensus 7 ~~~~eL~~ta~~~~a~gKGiLAaDES~gt~~Krl~~~Gvente~nrr~yR~~l~ttp~~~~~IsGvILfeETl~q~~~~G 86 (358)
++++||.+||++|++|||||||||||+|||+|||+.|||||||||||+||++|||||+|++||||||||||||+|+++||
T Consensus 2 ~~~~eL~~tA~~i~~~GKGilAADES~gT~~Krl~~iGvente~nrr~~R~llfttp~~~~~IsGvILfeETl~q~~~dG 81 (355)
T PTZ00019 2 EYAKELAETAKKIAAPGKGILAADESTGTIKKRFDPIGLENTEENRRAYRELLFTTEGLEQYISGVILFEETVYQKAPSG 81 (355)
T ss_pred cHHHHHHHHHHHHhCCCCeEEEeccCCCchhHHHHHcCCCCchHHHHHHHHhhccCcchhhceEEEEcchHhccccccCC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchHHHhhCCCcceeecCCccccccCCCCCcccCChhhHHHHHHHHhHcCCcceeeeeeeecC--CCCchHHHHHHHHH
Q 018326 87 KPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIG--PNEPSQLAINENAN 164 (358)
Q Consensus 87 ~~~~~~L~~~GIvpGIKvDkGl~~l~~~~ge~~t~GLD~L~~R~~~y~~~Ga~FaKWRsVi~i~--~~~Ps~~aI~~na~ 164 (358)
+||+|+|+++|||||||||||++|++|.++|++|+|||||++||++||++|||||||||||+|+ +++||..||.+||+
T Consensus 82 ~p~~~~L~~~GIvPgIKVDkGl~~l~G~~~e~~t~GLD~L~~R~~~y~~~GarFAKwRsVi~i~~~~g~PS~~aI~~na~ 161 (355)
T PTZ00019 82 KTFVELLKEKGIVPGIKVDKGLVTLPGTDGETSTQGLDGLAERAKKYYKAGARFAKWRAVLKIDPAKGKPSELAIQENAW 161 (355)
T ss_pred CChHHHHHHCCCeeeEEcCCCccCCCCCCCCccCcChHHHHHHHHHHHhcCCceeeeeeeeeecCCCCCCcHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999 78999999999999
Q ss_pred HHHHHHHHHHhCCcceeecceecCCCCCChhhHHHHHHHHHHHHHHHhhcCCceeeccccccCCCCCCCCC-CCCCHHHH
Q 018326 165 GLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEA-PKVTPDVI 243 (358)
Q Consensus 165 ~LAryA~icQ~~GLVPIVEPEVl~dgdh~ie~~~~vt~~vl~~v~~~L~~~~V~Leg~lLKpnmv~pG~~~-~~~~~~ev 243 (358)
+|||||+|||++||||||||||||||||||++|++|||+||++||++|++|+|+|||||||||||+||++| .+++|++|
T Consensus 162 ~LaryA~icq~~GLVPIVEPEVlidG~H~i~~c~~vte~Vl~~v~~aL~~~~V~lEG~lLKPnMV~pG~~~~~~~s~e~v 241 (355)
T PTZ00019 162 TLARYAAICQENGLVPIVEPEILIDGSHSIEVCQKVTEKVLAEVFKALNDHGVLLEGCLLKPNMVTPGSDCGVKATPQEV 241 (355)
T ss_pred HHHHHHHHHHHcCCCceecccccCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeecCceeccccccCCCcCCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 89999999
Q ss_pred HHHHHHHhhccCCCCCceEEecCCCCCHHHHHHHHHHhcccCCCCCCeeEEeehhhhcHHHHHHhcCCcccHHHHHHHHH
Q 018326 244 AEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFL 323 (358)
Q Consensus 244 A~~Tv~~l~r~vP~aVpgVvFLSGG~s~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~~~l~~W~G~~~nv~~AQ~~l~ 323 (358)
|++||++|+|||||+||||+|||||||+||||.||||||+++.++||.||||||||||+++||+|+||++|+++||++|+
T Consensus 242 A~~Tv~~l~rtVP~avPGI~FLSGGqSeeeAt~~LnamN~~~~~~PW~LsFSygRALQ~s~lk~W~Gk~env~aaQ~~~~ 321 (355)
T PTZ00019 242 AFYTVRTLSRTVPPALPGVMFLSGGQSEEEASLNLNAMNKLTLPRPWALSFSYGRALQSSALKTWKGKDENVAAAQKALL 321 (355)
T ss_pred HHHHHHHHHhcCCccCCeeeeccCCCCHHHHHHHHHHhhcCCCCCCceeccchhHhhCHHHHHHcCCChHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998777899999999999999999999999999999999999
Q ss_pred HHHHhcchhhcCCccCCCCCCcccccccccccccC
Q 018326 324 VRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 358 (358)
Q Consensus 324 ~ra~~n~~A~~G~y~~~~~~~~~~~~~l~~~~~~y 358 (358)
+|||+||+|++|+|.++++ ++.+.+|||+++|.|
T Consensus 322 ~rA~~N~~A~~G~y~~~~~-~~~~~~sl~~~~~~y 355 (355)
T PTZ00019 322 HRAKANSLAQLGKYKGGDG-GAAASESLYVKDYKY 355 (355)
T ss_pred HHHHhccHHhcCCCCCCCC-cccccccceeccccC
Confidence 9999999999999998875 445779999999998
No 3
>KOG1557 consensus Fructose-biphosphate aldolase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.8e-156 Score=1116.42 Aligned_cols=355 Identities=74% Similarity=1.090 Sum_probs=350.0
Q ss_pred cchhhHHHHHHHHHHhcCCCCceEeecCCCCChHHHhhhCCCCCccchHhhhhhhhcccCCcCCceeEEeeccccccccc
Q 018326 4 FKGKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQYLSGVILFEETLYQKT 83 (358)
Q Consensus 4 ~~~~~~~eL~~ta~~~~a~gKGiLAaDES~gt~~Krl~~~Gvente~nrr~yR~~l~ttp~~~~~IsGvILfeETl~q~~ 83 (358)
.+.++++||.+||++|++|||||||||||++||+|||++|||||||+|||+|||+|||||++++||||||||||||||++
T Consensus 8 ~~~~~~~EL~~~A~~I~~pGkGILAaDES~~T~gkRl~sIgveNtE~NRr~yRelLfttpg~~~~IsGvILfeETlyQkt 87 (363)
T KOG1557|consen 8 LSKAQKDELIKIAKKIVTPGKGILAADESTGTIGKRLASIGVENTEENRRAYRELLFTTPGLNQYISGVILFEETLYQKT 87 (363)
T ss_pred cCHHHHHHHHHHHHHhcCCCCceEeecCCcchHHHHHHhcCCcccHHHHHHHHHHhhcCCChhhccceEEeeeehheeeC
Confidence 45688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccchHHHhhCCCcceeecCCccccccCCCCCcccCChhhHHHHHHHHhHcCCcceeeeeeeecCCCCchHHHHHHHH
Q 018326 84 AAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENA 163 (358)
Q Consensus 84 ~~G~~~~~~L~~~GIvpGIKvDkGl~~l~~~~ge~~t~GLD~L~~R~~~y~~~Ga~FaKWRsVi~i~~~~Ps~~aI~~na 163 (358)
+||+||+|+|+++|||||||||||++||.|++||++|||||||.+||++||+.||+|||||||++|++++||.+||.+||
T Consensus 88 ~dGkpf~~~L~~~givpGIKvDKG~vplaGt~~E~ttqGLD~L~~Rca~y~k~Ga~FAKWR~vlki~~~~PS~lai~EnA 167 (363)
T KOG1557|consen 88 DDGKPFVDLLKEKGIVPGIKVDKGLVPLAGTNGETTTQGLDGLAERCAQYYKDGARFAKWRAVLKIGDGTPSALAIKENA 167 (363)
T ss_pred CCCCCHHHHHHhcCCccceEecCCcccccccCCcceeechhhHHHHHHHHHHcCCchhheeEEEEecCCCchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCcceeecceecCCCCCChhhHHHHHHHHHHHHHHHhhcCCceeeccccccCCCCCCCCC-CCCCHHH
Q 018326 164 NGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEA-PKVTPDV 242 (358)
Q Consensus 164 ~~LAryA~icQ~~GLVPIVEPEVl~dgdh~ie~~~~vt~~vl~~v~~~L~~~~V~Leg~lLKpnmv~pG~~~-~~~~~~e 242 (358)
+.|||||.|||+||||||||||||.||||||+||++|||+||++||++|++|+||||||||||||||||.+| .|++||+
T Consensus 168 ~~LARYA~IcQ~nGLVPIVEPEil~dGdHdi~r~~~VtE~Vla~vykaL~~hhV~lEGtLLKPnMVTpG~~s~~K~tpe~ 247 (363)
T KOG1557|consen 168 NGLARYASICQQNGLVPIVEPEILPDGDHDIKRCQYVTEKVLAAVYKALNDHHVYLEGTLLKPNMVTPGAESTEKYTPEQ 247 (363)
T ss_pred HHHHHHHHHHhhcCcccccccccccCCcccHHHHHHHHHHHHHHHHHHhhhcceeeeceecccccccCCccccccCCHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999989 9999999
Q ss_pred HHHHHHHHhhccCCCCCceEEecCCCCCHHHHHHHHHHhcccCCCCCCeeEEeehhhhcHHHHHHhcCCcccHHHHHHHH
Q 018326 243 IAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAF 322 (358)
Q Consensus 243 vA~~Tv~~l~r~vP~aVpgVvFLSGG~s~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~~~l~~W~G~~~nv~~AQ~~l 322 (358)
||++||++|+|+|||+||||+|||||||+||||.||||||+++.++||.||||||||||+|+|++|.||+||+++||++|
T Consensus 248 iA~~TvtaLrrtVP~AVPGI~FLSGgqseeeAt~nLnAiN~~~~~kpW~LtFSygRALq~s~L~aW~Gk~eni~~aq~~~ 327 (363)
T KOG1557|consen 248 IALATVTALRRTVPAAVPGIVFLSGGQSEEEATLNLNAINQEPGPKPWSLTFSYGRALQASVLKAWGGKDENIAAAQEAL 327 (363)
T ss_pred HHHHHHHHHHhcCCCCCceEEEecCCccHhhhhcchHHhhcCCCCCCceeeehHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcchhhcCCccCCCCCCcccccccccccccC
Q 018326 323 LVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 358 (358)
Q Consensus 323 ~~ra~~n~~A~~G~y~~~~~~~~~~~~~l~~~~~~y 358 (358)
++||++|+.|++|+|.+..+.+.++++|||+++|+|
T Consensus 328 l~ra~an~~a~~Gky~~~~~~~~aa~esl~v~~~~y 363 (363)
T KOG1557|consen 328 LKRAKANSLAALGKYTGQASGGAAASESLFVANYKY 363 (363)
T ss_pred HHHHhhcchhhccccccccccccchhhheeeccccC
Confidence 999999999999999999886667889999999998
No 4
>PLN02227 fructose-bisphosphate aldolase I
Probab=100.00 E-value=2.9e-155 Score=1136.89 Aligned_cols=350 Identities=57% Similarity=0.906 Sum_probs=343.1
Q ss_pred chhhHHHHHHHHHHhcCCCCceEeecCCCCChHHHhhhCCCCCccchHhhhhhhhcccCCcCCceeEEeecccccccccc
Q 018326 5 KGKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQYLSGVILFEETLYQKTA 84 (358)
Q Consensus 5 ~~~~~~eL~~ta~~~~a~gKGiLAaDES~gt~~Krl~~~Gvente~nrr~yR~~l~ttp~~~~~IsGvILfeETl~q~~~ 84 (358)
+.++++||.+||++|++|||||||+|||+|||+|||+.|||||||||||+||++|||||+|++||||||||||||+|+++
T Consensus 49 ~~~~~~eL~~tA~~ivapGKGIlAaDES~gT~gKRl~~iGVenteenRr~yR~lLfttp~~~~~IsGvILFeETl~Q~~~ 128 (399)
T PLN02227 49 ASAYADELVKTAKTIASPGHGIMAMDESNATCGKRLASIGLENTEANRQAYRTLLVSAPGLGQYISGAILFEETLYQSTT 128 (399)
T ss_pred cHHHHHHHHHHHHHHhCCCCceeeeccCcChhHHHHHHcCCCCchHHHHHHHHhcccCcchhcceEEEEcchhhccCcCc
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccchHHHhhCCCcceeecCCccccccCCCCCcccCChhhHHHHHHHHhHcCCcceeeeeeeecCCCCchHHHHHHHHH
Q 018326 85 AGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENAN 164 (358)
Q Consensus 85 ~G~~~~~~L~~~GIvpGIKvDkGl~~l~~~~ge~~t~GLD~L~~R~~~y~~~Ga~FaKWRsVi~i~~~~Ps~~aI~~na~ 164 (358)
||+||+|+||++|||||||||||++||+|++||++|+|||||++||++||++|||||||||||+|++. ||..+|.+|++
T Consensus 129 dG~pf~d~L~~~GIVPGIKVDKGl~~l~g~~~e~~tqGLDgL~~R~~~Y~~~GarFAKWRsVikI~~~-PS~~aI~~na~ 207 (399)
T PLN02227 129 DGKKMVDVLVEQNIVPGIKVDKGLVPLVGSYDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNG-PSALAVKEAAW 207 (399)
T ss_pred CCcCHHHHHHHCCCeeeEEcCCCcccCCCCCCCccCCChHHHHHHHHHHHHcCCceeehheeeccCCC-CCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999987 99999999999
Q ss_pred HHHHHHHHHHhCCcceeecceecCCCCCChhhHHHHHHHHHHHHHHHhhcCCceeeccccccCCCCCCCCC-CCCCHHHH
Q 018326 165 GLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEA-PKVTPDVI 243 (358)
Q Consensus 165 ~LAryA~icQ~~GLVPIVEPEVl~dgdh~ie~~~~vt~~vl~~v~~~L~~~~V~Leg~lLKpnmv~pG~~~-~~~~~~ev 243 (358)
.|||||+|||++||||||||||||||||||++|++|||+||++||++|++|+|+|||||||||||+||++| .+++|++|
T Consensus 208 ~LArYA~icQ~~GLVPIVEPEVliDGdH~ie~c~~Vte~VL~~vfkaL~~h~V~lEG~LLKPnMV~pG~~~~~~~s~e~V 287 (399)
T PLN02227 208 GLARYAAISQDSGLVPIVEPEIMLDGEHGIDRTYDVAEKVWAEVFFYLAQNNVMFEGILLKPSMVTPGAEATDRATPEQV 287 (399)
T ss_pred HHHHHHHHHHHcCCCceecceecCCCCcCHHHHHHHHHHHHHHHHHHHHHcCceeecceeccceeccCccCCCcCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 89999999
Q ss_pred HHHHHHHhhccCCCCCceEEecCCCCCHHHHHHHHHHhcccCCCCCCeeEEeehhhhcHHHHHHhcCCcccHHHHHHHHH
Q 018326 244 AEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFL 323 (358)
Q Consensus 244 A~~Tv~~l~r~vP~aVpgVvFLSGG~s~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~~~l~~W~G~~~nv~~AQ~~l~ 323 (358)
|++||++|+|||||+||||+|||||||+||||.||||||++ ++||.||||||||||+++||+|+||++|+++||++|+
T Consensus 288 A~~Tv~~L~rtVP~AVPGI~FLSGGQSeeeAt~nLnAmN~~--~~PW~LsFSygRALQ~s~Lk~W~Gk~eNv~aAQ~al~ 365 (399)
T PLN02227 288 ASYTLKLLRNRIPPAVPGIMFLSGGQSELEATLNLNAMNQA--PNPWHVSFSYARALQNTCLKTWGGKEENVKAAQDILL 365 (399)
T ss_pred HHHHHHHHHhcCCCCCCeeeecCCCCcHHHHHHHHHHhhcC--CCCceeccchHHhhCHHHHHHcCCChHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999997 5799999999999999999999999999999999999
Q ss_pred HHHHhcchhhcCCccCCCCCCcccccccccccccC
Q 018326 324 VRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 358 (358)
Q Consensus 324 ~ra~~n~~A~~G~y~~~~~~~~~~~~~l~~~~~~y 358 (358)
+|||+||+|++|+|.++++ +..+.+|||+++|+|
T Consensus 366 ~RAk~Ns~A~~G~y~~~~~-~~~~~~sl~~~~~~y 399 (399)
T PLN02227 366 ARAKANSLAQLGKYTGEGE-SEEAKEGMFVKGYTY 399 (399)
T ss_pred HHHHHccHHhcCCCCCCCC-cccccccceeccccC
Confidence 9999999999999998876 446779999999998
No 5
>PLN02425 probable fructose-bisphosphate aldolase
Probab=100.00 E-value=5.3e-154 Score=1126.96 Aligned_cols=351 Identities=57% Similarity=0.915 Sum_probs=343.3
Q ss_pred cchhhHHHHHHHHHHhcCCCCceEeecCCCCChHHHhhhCCCCCccchHhhhhhhhcccCCcCCceeEEeeccccccccc
Q 018326 4 FKGKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQYLSGVILFEETLYQKT 83 (358)
Q Consensus 4 ~~~~~~~eL~~ta~~~~a~gKGiLAaDES~gt~~Krl~~~Gvente~nrr~yR~~l~ttp~~~~~IsGvILfeETl~q~~ 83 (358)
...++++||.+||++|++|||||||+|||+|||+|||+.|||||||||||+||++|||||+|++||||||||||||+|++
T Consensus 39 ~~~~~~~eL~~tA~~i~apGKGIlA~DES~gT~~Krl~~iGVente~nrr~yR~lLfttp~~~~~IsGvILFeETl~q~~ 118 (390)
T PLN02425 39 RAGSYSDELVQTAKSVASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGEYISGAILFEETLYQST 118 (390)
T ss_pred ccHHHHHHHHHHHHHHhCCCCceEeeccccCchhHHHHHcCCCCchhhhHHHHhhhccCcchhhceEEEEcchHhccccc
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccchHHHhhCCCcceeecCCccccccCCCCCcccCChhhHHHHHHHHhHcCCcceeeeeeeecCCCCchHHHHHHHH
Q 018326 84 AAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENA 163 (358)
Q Consensus 84 ~~G~~~~~~L~~~GIvpGIKvDkGl~~l~~~~ge~~t~GLD~L~~R~~~y~~~Ga~FaKWRsVi~i~~~~Ps~~aI~~na 163 (358)
+||+||+|+|+++|||||||||||++|++|.++|++|+|||||++||++||++|||||||||||+|++. ||..+|.+|+
T Consensus 119 ~dG~p~~d~L~~~GIVPGIKVDkGl~~l~G~~~e~~t~GLDgL~~R~~~y~~~GarFAKWRsViki~~~-Ps~~aI~~na 197 (390)
T PLN02425 119 TDGKKFVDCLRDQNIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSAEYYKQGARFAKWRTVVSIPCG-PSALAVKEAA 197 (390)
T ss_pred cCCcCHHHHHHHCCceeeEEecCCCCcCCCCCCCccCCChHHHHHHHHHHHHcCCceeehheeeccCCC-CCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999987 9999999999
Q ss_pred HHHHHHHHHHHhCCcceeecceecCCCCCChhhHHHHHHHHHHHHHHHhhcCCceeeccccccCCCCCCCCC-CCCCHHH
Q 018326 164 NGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEA-PKVTPDV 242 (358)
Q Consensus 164 ~~LAryA~icQ~~GLVPIVEPEVl~dgdh~ie~~~~vt~~vl~~v~~~L~~~~V~Leg~lLKpnmv~pG~~~-~~~~~~e 242 (358)
+.|||||+|||++||||||||||||||||||++|++|||+||++||++|++|+|+|||||||||||+||++| .+++||+
T Consensus 198 ~~LArYA~icQ~~GLVPIVEPEVlidGdH~ie~c~~Vte~VL~~vf~aL~~~~V~lEG~LLKPnMV~pG~~~~~~~s~e~ 277 (390)
T PLN02425 198 WGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAQNNVLFEGILLKPSMVTPGAEHKEKASPET 277 (390)
T ss_pred HHHHHHHHHHHHcCCCceecceecCCCCcCHHHHHHHHHHHHHHHHHHHHHcCceeecceecccccccCCcCCCCCCHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999 8999999
Q ss_pred HHHHHHHHhhccCCCCCceEEecCCCCCHHHHHHHHHHhcccCCCCCCeeEEeehhhhcHHHHHHhcCCcccHHHHHHHH
Q 018326 243 IAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAF 322 (358)
Q Consensus 243 vA~~Tv~~l~r~vP~aVpgVvFLSGG~s~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~~~l~~W~G~~~nv~~AQ~~l 322 (358)
||++||++|+|||||+||||+|||||||+||||.||||||+. ++||.||||||||||+++||+|+||++|+++||++|
T Consensus 278 VA~~Tv~~l~rtVP~AVPGI~FLSGGqseeeAt~~LnamN~~--~~PW~LsFSygRALQ~s~Lk~W~Gk~env~aAQ~~l 355 (390)
T PLN02425 278 IAKYTLTMLRRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQS--PNPWHVSFSYARALQNSVLKTWQGRPENVEAAQKAL 355 (390)
T ss_pred HHHHHHHHHHhcCCCCCCcceeccCCCcHHHHHHHHHhhcCC--CCCceeecchHHhhCHHHHHHcCCchHHHHHHHHHH
Confidence 999999999999999999999999999999999999999986 479999999999999999999999999999999999
Q ss_pred HHHHHhcchhhcCCccCCCCCCcccccccccccccC
Q 018326 323 LVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 358 (358)
Q Consensus 323 ~~ra~~n~~A~~G~y~~~~~~~~~~~~~l~~~~~~y 358 (358)
++||++|++|++|+|.++++ +..+.+|||+++|.|
T Consensus 356 ~~RA~~N~~A~~G~y~~~~~-~~~~~~sl~~~~~~y 390 (390)
T PLN02425 356 LVRAKANSLAQLGRYSAEGE-SEEAKKGMFVKGYTY 390 (390)
T ss_pred HHHHHHccHHhcCCCCCCCC-cccccccceeccccC
Confidence 99999999999999998876 446779999999998
No 6
>cd00948 FBP_aldolase_I_a Fructose-1,6-bisphosphate aldolase. The enzyme catalyzes the cleavage of fructose 1,6-bisphosphate to glyceraldehyde 3-phosphate and dihydroxyacetone phosphate (DHAP). This family includes proteins found in vertebrates, plants, and bacterial plant pathogens. Mutations in the aldolase genes in humans cause hemolytic anemia and hereditary fructose intolerance. The enzyme is a member of the class I aldolase family, which utilizes covalent catalysis through a Schiff base formed between a lysine residue of the enzyme and ketose substrates.
Probab=100.00 E-value=4.4e-153 Score=1105.46 Aligned_cols=328 Identities=76% Similarity=1.158 Sum_probs=325.4
Q ss_pred HHHHHHHHHhcCCCCceEeecCCCCChHHHhhhCCCCCccchHhhhhhhhcccCCcCCceeEEeeccccccccccCCccc
Q 018326 10 DELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPF 89 (358)
Q Consensus 10 ~eL~~ta~~~~a~gKGiLAaDES~gt~~Krl~~~Gvente~nrr~yR~~l~ttp~~~~~IsGvILfeETl~q~~~~G~~~ 89 (358)
+||.+||++|+++||||||||||+|||+|||++|||||||||||+||++|||||+|++||||||||||||+|+++||+||
T Consensus 2 ~eL~~tA~~iv~~GKGilAADES~gT~~Krl~~iGvente~nrr~yR~llft~p~~~~~IsGvILfeeTl~q~~~dG~p~ 81 (330)
T cd00948 2 EELIKTAKAIVAPGKGILAADESTGTIGKRFASIGVENTEENRRAYRELLFTTPGLGQYISGVILFEETLYQKTDDGKPF 81 (330)
T ss_pred hHHHHHHHHHhCCCCeEEEecCCCCchHHHHHHcCCCCchHHHHHHHHhhccCCCccccEEEEECChhhccccccCCcCh
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHhhCCCcceeecCCccccccCCCCCcccCChhhHHHHHHHHhHcCCcceeeeeeeecCCCCchHHHHHHHHHHHHHH
Q 018326 90 VDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARY 169 (358)
Q Consensus 90 ~~~L~~~GIvpGIKvDkGl~~l~~~~ge~~t~GLD~L~~R~~~y~~~Ga~FaKWRsVi~i~~~~Ps~~aI~~na~~LAry 169 (358)
+|+|+++|||||||||||++|++++++|++|+|||||++||++||++|||||||||||+|++++||..||.+||++||||
T Consensus 82 ~~~L~~~GIvPgIKVDkGl~~l~g~~~e~~t~GLD~L~~R~~~y~~~GarFAKwRsVi~i~~~~PS~~~I~~na~~Lary 161 (330)
T cd00948 82 VDILKEKGIVPGIKVDKGLVPLAGTDGETTTQGLDGLAERCAKYYKQGARFAKWRAVLKIGNGTPSELAIKENAHGLARY 161 (330)
T ss_pred HHHHHHCCCeeeEEeCCCccccCCCCCCccCcChHHHHHHHHHHhhcCCcceeeheeeeccCCCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCcceeecceecCCCCCChhhHHHHHHHHHHHHHHHhhcCCceeeccccccCCCCCCCCC-CCCCHHHHHHHHH
Q 018326 170 AIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEA-PKVTPDVIAEHTV 248 (358)
Q Consensus 170 A~icQ~~GLVPIVEPEVl~dgdh~ie~~~~vt~~vl~~v~~~L~~~~V~Leg~lLKpnmv~pG~~~-~~~~~~evA~~Tv 248 (358)
|+|||++||||||||||||||||||++|++|||+||++||++|++|+|+|||||||||||+||.+| .++++++||.+||
T Consensus 162 A~icq~~GLVPIVEPEVl~dG~H~i~~c~~vte~Vl~~vf~aL~~~~V~lEG~lLKPnMV~pG~~~~~~~~~e~vA~~Tv 241 (330)
T cd00948 162 AAICQENGLVPIVEPEVLMDGDHDIERCQEVTEKVLAAVYKALNDHHVLLEGTLLKPNMVTPGADCKKKASPEEVAEYTV 241 (330)
T ss_pred HHHHHHcCCCceecccccCCCCCCHHHHHHHHHHHHHHHHHHHHHcCcccccceeccccccCCCcCCCcCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999 8999999999999
Q ss_pred HHhhccCCCCCceEEecCCCCCHHHHHHHHHHhcccCCCCCCeeEEeehhhhcHHHHHHhcCCcccHHHHHHHHHHHHHh
Q 018326 249 RALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKA 328 (358)
Q Consensus 249 ~~l~r~vP~aVpgVvFLSGG~s~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~~~l~~W~G~~~nv~~AQ~~l~~ra~~ 328 (358)
++|+|||||+||||+|||||||+||||.||||||+++.++||.||||||||||+++||+|+|+++|+++||++|++||++
T Consensus 242 ~~l~rtvP~avpGI~FLSGGqseeeAt~~LnamN~~~~~~PW~LsFSygRALQ~s~lk~W~G~~~n~~aaQ~~~~~ra~~ 321 (330)
T cd00948 242 RALRRTVPAAVPGIVFLSGGQSEEEATLNLNAMNKLPLPKPWALSFSYGRALQASALKAWGGKKENVEAAQKALLKRAKA 321 (330)
T ss_pred HHHHhcCCccCCeeeeccCCCCHHHHHHHHHHhhcCCCCCCcccccchhHHhCHHHHHHcCCChHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999887789999999999999999999999999999999999999999
Q ss_pred cchhhcCCc
Q 018326 329 NSEATLGTY 337 (358)
Q Consensus 329 n~~A~~G~y 337 (358)
||+|++|+|
T Consensus 322 N~~A~~G~y 330 (330)
T cd00948 322 NSLAALGKY 330 (330)
T ss_pred hhHHhcCCC
Confidence 999999998
No 7
>PF00274 Glycolytic: Fructose-bisphosphate aldolase class-I; InterPro: IPR000741 Fructose-bisphosphate aldolase (4.1.2.13 from EC) [, ] is a glycolytic enzyme that catalyses the reversible aldol cleavage or condensation of fructose-1,6-bisphosphate into dihydroxyacetone-phosphate and glyceraldehyde 3-phosphate. There are two classes of fructose-bisphosphate aldolases with different catalytic mechanisms: class I enzymes [] do not require a metal ion, and are characterised by the formation of a Schiff base intermediate between a highly conserved active site lysine and a substrate carbonyl group, while the class II enzymes require an active-site divalent metal ion. This entry represents the class I enzymes. In vertebrates, three forms of this enzyme are found: aldolase A is expressed in muscle, aldolase B in liver, kidney, stomach and intestine, and aldolase C in brain, heart and ovary. The different isozymes have different catalytic functions: aldolases A and C are mainly involved in glycolysis, while aldolase B is involved in both glycolysis and gluconeogenesis. Defects in aldolase B result in hereditary fructose intolerance.; GO: 0004332 fructose-bisphosphate aldolase activity, 0006096 glycolysis; PDB: 1EX5_B 6ALD_D 2QUU_B 3DFN_B 1ADO_B 3DFO_A 1ZAL_A 1J4E_C 3DFP_A 1ZAJ_B ....
Probab=100.00 E-value=1.4e-147 Score=1080.68 Aligned_cols=347 Identities=68% Similarity=1.043 Sum_probs=318.2
Q ss_pred HHHHHHHHhcCCCCceEeecCCCCChHHHhhhCCCCCccchHhhhhhhhcccCCcCCceeEEeeccccccccccCCccch
Q 018326 11 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFV 90 (358)
Q Consensus 11 eL~~ta~~~~a~gKGiLAaDES~gt~~Krl~~~Gvente~nrr~yR~~l~ttp~~~~~IsGvILfeETl~q~~~~G~~~~ 90 (358)
||++||++|++|||||||||||+|||+|||++|||||||||||+||++|||||++++||||||||||||+|+++||+||+
T Consensus 1 eL~~ta~~~~a~gKGiLAaDES~gt~~Krl~~~Gie~te~~r~~yR~~l~tt~~~~~~IsGvILfeeTl~q~~~~G~~~~ 80 (348)
T PF00274_consen 1 ELRATARAIVAPGKGILAADESGGTIPKRLAAYGIENTEENRRAYRELLFTTPGLSEYISGVILFEETLYQKTADGKPFP 80 (348)
T ss_dssp HHHHHHHHHTGTT-EEEEE---HHHHHHHHHHTTS-CGHHHHHHHHHHHHTSGGGGGTEEEEEE-HHHHTSBETTSSBHH
T ss_pred ChHHHHHHHhCCCCcEEEecCCCccHHHHHHHcCCCCchhhHHHHHHhhhcccccccceEEEEcccchhhccccCCCChH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhCCCcceeecCCccccccCCCCCcccCChhhHHHHHHHHhHcCCcceeeeeeeecCCCCchHHHHHHHHHHHHHHH
Q 018326 91 DVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYA 170 (358)
Q Consensus 91 ~~L~~~GIvpGIKvDkGl~~l~~~~ge~~t~GLD~L~~R~~~y~~~Ga~FaKWRsVi~i~~~~Ps~~aI~~na~~LAryA 170 (358)
|+|+++|||||||||||+.|++++++|++|+|||||++||++|+++|||||||||||+|++++||+.||++||++|||||
T Consensus 81 ~~L~~~GIvpgIKVDkGl~~l~~~~~ek~t~GLD~L~~R~~~y~~~GarFaKwRsVi~i~~~~ps~~~I~~na~~laryA 160 (348)
T PF00274_consen 81 DYLKEKGIVPGIKVDKGLVPLPGGVQEKPTQGLDGLLERCAEYYAFGARFAKWRSVIKIGDGTPSEAAIKANAHQLARYA 160 (348)
T ss_dssp HHHHHTT-EEEEE---EEEEETTSSSEEEEETTTTHHHHHHHHHHTTEEEEEEEEEEESBTTBS-HHHHHHHHHHHHHHH
T ss_pred HHHHhcCceeeEeccCceeccccCCCceeCCCcchHHHHHHHHhhhcccceeeeeeeecCCCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCcceeecceecCCCCCChhhHHHHHHHHHHHHHHHhhcCCceeeccccccCCCCCCCCC-CCCCHHHHHHHHHH
Q 018326 171 IICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEA-PKVTPDVIAEHTVR 249 (358)
Q Consensus 171 ~icQ~~GLVPIVEPEVl~dgdh~ie~~~~vt~~vl~~v~~~L~~~~V~Leg~lLKpnmv~pG~~~-~~~~~~evA~~Tv~ 249 (358)
+|||++||||||||||+|||+|++++|++|+++||++||++|++|+|+|||||||||||+||.+| .++++++||.+||+
T Consensus 161 ~icq~~GLVPIVEPEVli~g~h~~~~~~~vt~~vl~~v~~~l~~~~V~Leg~llKpnmv~pG~~~~~~~~~~~vA~~T~~ 240 (348)
T PF00274_consen 161 AICQEAGLVPIVEPEVLIDGDHDIERCAEVTEAVLAAVFKALNDHGVMLEGTLLKPNMVTPGKDHPKKASPEEVAEATVR 240 (348)
T ss_dssp HHHHHTT-EEEEEEEEESSSSTHHHHHHHHHHHHHHHHHHHHHHTTEEGGGEEEEEB-S---TTSSS---HHHHHHHHHH
T ss_pred HHHHhccCccccccccccCCCchHHHHHHHHHHHHHHHHHhhccCEEEeccccccccceeecccCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999 78999999999999
Q ss_pred HhhccCCCCCceEEecCCCCCHHHHHHHHHHhcccCCCCCCeeEEeehhhhcHHHHHHhcCCcccHHHHHHHHHHHHHhc
Q 018326 250 ALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKAN 329 (358)
Q Consensus 250 ~l~r~vP~aVpgVvFLSGG~s~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~~~l~~W~G~~~nv~~AQ~~l~~ra~~n 329 (358)
+|+|+||++||||||||||||+||||.||||||+++.++||.||||||||||+++|++|+|++||+++||++|++|||+|
T Consensus 241 ~l~~~vP~aVpgIvFLSGGqs~e~At~~Lna~n~~~~~~PW~lsFSfgRALq~~~L~~W~g~~en~~aAQ~al~~ra~~n 320 (348)
T PF00274_consen 241 ALRRTVPAAVPGIVFLSGGQSEEEATANLNAINKMPGNKPWPLSFSFGRALQESALKAWQGKDENVAAAQKALLHRAKAN 320 (348)
T ss_dssp HHHHHSBTTSSEEEEB-TTS-HHHHHHHHHHHHHSSS--SSEEEEEESHHHHHHHHHHHTTSGGGHHHHHHHHHHHHHHH
T ss_pred HHHHhcccccceeEecCCCCCHHHHHHHHHHhhCCCcCCChheeEEechhhhHHHHHHhccCccchHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999888999999999999999999999999999999999999999999
Q ss_pred chhhcCCccCCCCCCcccccccccccccC
Q 018326 330 SEATLGTYKGDAQLGEGAAESLHVKDYKY 358 (358)
Q Consensus 330 ~~A~~G~y~~~~~~~~~~~~~l~~~~~~y 358 (358)
++|++|+|.++++ +.++++||||+||+|
T Consensus 321 ~~A~~G~y~~~~~-~~~~~~sl~~~~y~Y 348 (348)
T PF00274_consen 321 SLAALGKYSGGME-SGAASESLYVKGYKY 348 (348)
T ss_dssp HHHTTT-CSSSSS-SSSTTSSCGSSCSG-
T ss_pred CccccCCcCCCCC-CcccccccccCCccC
Confidence 9999999999987 667889999999999
No 8
>cd00344 FBP_aldolase_I Fructose-bisphosphate aldolase class I. Fructose-1,6-bisphosphate aldolase is an enzyme of the glycolytic and gluconeogenic pathways found in vertebrates, plants, and bacteria. The enzyme catalyzes the cleavage of fructose 1,6-bisphosphate to glyceraldehyde 3-phosphate and dihydroxyacetone phosphate (DHAP). Mutations in the aldolase genes in humans cause hemolytic anemia and hereditary fructose intolerance. The enzyme is a member of the class I aldolase family, which utilizes covalent catalysis through a Schiff base formed between a lysine residue of the enzyme and ketose substrates. Although structurally similar, the class II aldolases use a different mechanism and are believed to have an independent evolutionary origin.
Probab=100.00 E-value=8e-137 Score=996.27 Aligned_cols=325 Identities=63% Similarity=0.943 Sum_probs=320.5
Q ss_pred HHHHHHHHHhcCCCCceEeecCCCCChHHHhhhCCCCCccchHhhhhhhhccc-CCcCCceeEEeeccccccccccCCcc
Q 018326 10 DELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCT-PGALQYLSGVILFEETLYQKTAAGKP 88 (358)
Q Consensus 10 ~eL~~ta~~~~a~gKGiLAaDES~gt~~Krl~~~Gvente~nrr~yR~~l~tt-p~~~~~IsGvILfeETl~q~~~~G~~ 88 (358)
++|.+||++|++|||||||||||+||++|||..+|+||||+|||+||++|||+ |++++||||||||||||+|++.+|+|
T Consensus 2 ~eL~~~a~~~~~~GKGilAAdEssgt~~kR~~~i~~enteenrr~~r~ll~~~~~~i~~~IsGvILfeeTl~q~~~~g~~ 81 (328)
T cd00344 2 KELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPRIGGVILFHETLYQKADDGRP 81 (328)
T ss_pred hHHHHHHHHhcCCCCeeEEeccCCCcccchhhhCCCCCchhhHHHHHHHHhccCchhhccEEEEEechhhccccCCCCcc
Confidence 68999999999999999999999999999999999999999999999999995 79999999999999999999999999
Q ss_pred chHHHhhCCCcceeecCCccccccCCCCCcccCChhhHHHHHHHHhHcCCcceeeeeeeecCCCCchHHHHHHHHHHHHH
Q 018326 89 FVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLAR 168 (358)
Q Consensus 89 ~~~~L~~~GIvpGIKvDkGl~~l~~~~ge~~t~GLD~L~~R~~~y~~~Ga~FaKWRsVi~i~~~~Ps~~aI~~na~~LAr 168 (358)
|+++|+++|||||||||||++|+++.++|++|+|||+|++||++||++|||||||||||+|++++||..||.+||++|||
T Consensus 82 ~~~ll~~~GIvPgIKVDkGl~~l~g~~~ek~t~GLD~L~~R~~~y~~~GarfaKwRsVi~i~~~~Ps~~~I~~na~~lar 161 (328)
T cd00344 82 FPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLAR 161 (328)
T ss_pred HHHHHHhCCCeeeEEecCCcccCCCCCCCccCCChHHHHHHHHHHhhcCCceeeeeeeeecCCCCCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCcceeecceecCCCCCChhhHHHHHHHHHHHHHHHhhcCCceeeccccccCCCCCCCCC-CCCCHHHHHHHH
Q 018326 169 YAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEA-PKVTPDVIAEHT 247 (358)
Q Consensus 169 yA~icQ~~GLVPIVEPEVl~dgdh~ie~~~~vt~~vl~~v~~~L~~~~V~Leg~lLKpnmv~pG~~~-~~~~~~evA~~T 247 (358)
||++||++||||||||||||||+|+|++|++|+++||.++|++|++|+|+|||+|||||||+||.+| .++++++||.+|
T Consensus 162 yA~~cq~~GLVPIVEPEVlidg~h~i~~~~~vt~~vl~~~~~~L~~~~V~leg~lLKpnmv~~G~~~~~~~~~~~va~~t 241 (328)
T cd00344 162 YASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHIYLEGTLLKPNMVTPGHACTQKFSHEEIAMAT 241 (328)
T ss_pred HHHHHHHCCCCceecceeCCCCCccHHHHHHHHHHHHHHHHHHhhhcCCcccCeEEEccccccCccCCCcCCHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred HHHhhccCCCCCceEEecCCCCCHHHHHHHHHHhcccCCCCCCeeEEeehhhhcHHHHHHhcCCcccHHHHHHHHHHHHH
Q 018326 248 VRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCK 327 (358)
Q Consensus 248 v~~l~r~vP~aVpgVvFLSGG~s~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~~~l~~W~G~~~nv~~AQ~~l~~ra~ 327 (358)
+.+|+|+||++||||||||||||+||||.|||+||.+..++||.||||||||||+++|++|+|+++|+++||++|++||+
T Consensus 242 ~~~l~~~vP~aVpgVvfLSGGqS~eeAt~~Lna~n~~~~~~pW~lsfSfgRALq~~~L~~w~g~~~n~~aaq~a~l~rA~ 321 (328)
T cd00344 242 VTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRAL 321 (328)
T ss_pred HHHHHhhCCCcCCeEEeccCCCCHHHHHHHHHHhcCCCCCCCceEEechHHHhCHHHHHhcCCchhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999987778999999999999999999999999999999999999999
Q ss_pred hcchhhc
Q 018326 328 ANSEATL 334 (358)
Q Consensus 328 ~n~~A~~ 334 (358)
+|++|+.
T Consensus 322 ~n~~aa~ 328 (328)
T cd00344 322 ANSLAAQ 328 (328)
T ss_pred HHHHhcC
Confidence 9999873
No 9
>COG3588 Fructose-1,6-bisphosphate aldolase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.1e-125 Score=899.28 Aligned_cols=328 Identities=49% Similarity=0.738 Sum_probs=321.4
Q ss_pred HHHHHHHHHhcCCCCceEeecCCCCChHHHhhhCCCCCccchHhhhhhhhcccCCcC-CceeEEeeccccccccccCCcc
Q 018326 10 DELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGAL-QYLSGVILFEETLYQKTAAGKP 88 (358)
Q Consensus 10 ~eL~~ta~~~~a~gKGiLAaDES~gt~~Krl~~~Gvente~nrr~yR~~l~ttp~~~-~~IsGvILfeETl~q~~~~G~~ 88 (358)
++|.+||.+||++||||||||||+|||+|||+.||||+||||||.||+|||+||++. +||||||||||||+|+.++|.|
T Consensus 3 erl~~~a~~~v~nGKG~iAADeS~gt~~krf~~~Gie~te~srrd~Re~l~~s~~~~~~yI~GaILfeeTm~q~~~~g~p 82 (332)
T COG3588 3 ERLNDTALKKVANGKGFIAADESGGTTPKRFDSYGIEETEYSRRDMRERLFTSPDFMEDYILGAILFEETMDQKADGGYP 82 (332)
T ss_pred cchhHHHHHHHhcCCceEeecCCCCchhhHHHHcCCCCchhhhHHHHHHHhcCcccchhhhhheehhHHHHHHhhcCCCC
Confidence 578999999999999999999999999999999999999999999999999999766 9999999999999999999999
Q ss_pred chHHHhhCCCcceeecCCccccccCCCCCcccCChhhHHHHHHHHhHcCCcceeeeeeeecCCCCchHHHHHHHHHHHHH
Q 018326 89 FVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLAR 168 (358)
Q Consensus 89 ~~~~L~~~GIvpGIKvDkGl~~l~~~~ge~~t~GLD~L~~R~~~y~~~Ga~FaKWRsVi~i~~~~Ps~~aI~~na~~LAr 168 (358)
++++++++||+||||||||+.|+.|.++|++|+|||||++||++|+++||||||||+||+|+++.||..||++|+++|||
T Consensus 83 ~~~l~~~kgivPgiKvDkGl~~~~g~~~ek~t~gLd~L~~R~~~~~~~GarfaKwRsvI~~~~~~ps~~~I~~nv~~la~ 162 (332)
T COG3588 83 ADYLWKEKGIVPGIKVDKGLKPLAGVQLEKPTEGLDGLLKRAKEYHIFGARFAKWRSVIKIADGIPSWGGIKANVHQLAE 162 (332)
T ss_pred HHHHHHhcCCCcceeecCCcccccCCccccCCcCHHHHHHHHHHhhhccchHHHHHHHHHhccCCCccchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCcceeecceecCCCCCChhhHHHHHHHHHHHHHHHhhcCCceeeccccccCCCCCCCCCCCCCHHHHHHHHH
Q 018326 169 YAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAPKVTPDVIAEHTV 248 (358)
Q Consensus 169 yA~icQ~~GLVPIVEPEVl~dgdh~ie~~~~vt~~vl~~v~~~L~~~~V~Leg~lLKpnmv~pG~~~~~~~~~evA~~Tv 248 (358)
||++||++||||||||||+||||||+++|++|++.+|+.+|++|++..|.|+|++||||||++|+.|.+.||++||+-|+
T Consensus 163 yAa~cq~aGlVPIVEPEV~mdg~~d~~~~eeVtk~~L~k~~~~L~~~~vvm~g~~lk~smv~~g~~~~~~s~~~vae~tl 242 (332)
T COG3588 163 YAALCQAAGLVPIVEPEVDIDGDHDKARSEEVTKAELRKLLNALNEERVVMLGLILKTSMVISGKKSREASPDEVAEDTL 242 (332)
T ss_pred HHHHHHHCCCcccccceeeccCcccHHHHHHHHHHHHHHHHHHhhhhHhHhhcccccchhccccccccccchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999995559999999999
Q ss_pred HHhhccCCCCCceEEecCCCCCHHHHHHHHHHhcccCCCCCCeeEEeehhhhcHHHHHHhcCCcccHHHHHHHHHHHHHh
Q 018326 249 RALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKA 328 (358)
Q Consensus 249 ~~l~r~vP~aVpgVvFLSGG~s~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~~~l~~W~G~~~nv~~AQ~~l~~ra~~ 328 (358)
.+|+++||..||||||||||||.||||+|||+||... +.||+||||||||||+.+|++|+|+.+|++++|++|++|+..
T Consensus 243 ~~~~~tvP~~vpgIvfLSGG~s~eeA~~~Lsa~n~~~-~~pw~L~fSf~RAL~~~~L~aw~~d~enf~~~q~~~~e~~~~ 321 (332)
T COG3588 243 YSLLSTVPAVVPGIVFLSGGYSSEEANAHLSANNGER-PLPWSLIFSFSRALQEGALKAWQGDEENFAKAQAASIERIYE 321 (332)
T ss_pred HHHHhcCCcccceeEEecCCcchHHHHHHHHhhcCCC-CCCceeeeeHHHHhhhhhhhhhcccHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999765 589999999999999999999999999999999999999999
Q ss_pred cchhhcCCcc
Q 018326 329 NSEATLGTYK 338 (358)
Q Consensus 329 n~~A~~G~y~ 338 (358)
||.+++|+|.
T Consensus 322 asl~a~gkw~ 331 (332)
T COG3588 322 ASLAALGKWK 331 (332)
T ss_pred HHHhhcCCCC
Confidence 9999999996
No 10
>PRK05377 fructose-1,6-bisphosphate aldolase; Reviewed
Probab=100.00 E-value=2.6e-88 Score=645.19 Aligned_cols=247 Identities=33% Similarity=0.409 Sum_probs=223.6
Q ss_pred hcCCCCceEe-ecCCCCChHHHhhhCCCCCccchH--------hhhhhhhcccCCc-CCceeEEeeccccccccccCCcc
Q 018326 19 IGTPGKGILA-ADESTGTIGKRLSSINVENVESNR--------RALRELLFCTPGA-LQYLSGVILFEETLYQKTAAGKP 88 (358)
Q Consensus 19 ~~a~gKGiLA-aDES~gt~~Krl~~~Gvente~nr--------r~yR~~l~ttp~~-~~~IsGvILfeETl~q~~~~G~~ 88 (358)
=+++|||||| +|||+|||||||+.|||||||||| |+||++|||||+| ++||||||||||||+| ++||+|
T Consensus 9 ~~~~GKG~lAAlDeS~GT~~Krl~~~GVente~n~~~eM~~li~~~R~~l~tsp~f~~~~I~GaILFEeTl~q-~~dG~p 87 (296)
T PRK05377 9 KMKNGKGFIAALDQSGGSTPKALKLYGVEEDAYSNEEEMFDLVHEMRTRIITSPAFTGDKILGAILFEQTMDR-EIEGKP 87 (296)
T ss_pred hhcCCCceEEehhccCCchHHHHHHcCCCCcccccchhHHHHHHHHhhccccCccccccceEEEEcchHhhcC-ccCCcC
Confidence 3689999996 599999999999999999999996 9999999999995 5999999999999999 799999
Q ss_pred chHHHhh-CCCcceeecCCccccccCCCC---CcccCChhhHHHHHHHHhHcCCcceeeeeeeecCCCCchHHHHHHHHH
Q 018326 89 FVDVLKE-GGVLPGIKVDKGTVELAGTNG---ETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENAN 164 (358)
Q Consensus 89 ~~~~L~~-~GIvpGIKvDkGl~~l~~~~g---e~~t~GLD~L~~R~~~y~~~Ga~FaKWRsVi~i~~~~Ps~~aI~~na~ 164 (358)
|+++||+ +|||||||||||++|++ +| +++|+|||+|++||++|+ ++||||||||+|++ +.||.+||+
T Consensus 88 ~~d~L~e~kGIVPgIKVDKGl~~l~--~gvql~k~~~GLD~Ll~R~~~y~---~~GaKwRsViki~~----~~~I~~na~ 158 (296)
T PRK05377 88 TADYLWEKKGVVPFLKVDKGLAEEA--NGVQLMKPIPNLDDLLDRAVEKG---IFGTKMRSVIKEAN----EQGIAAVVA 158 (296)
T ss_pred HHHHHHhcCCcceEEEecCCcccCC--CCccccccCCCHHHHHHHHHHhC---CCccceeeeecCCC----HHHHHHHHH
Confidence 9999997 99999999999999996 88 457899999999999984 55599999999965 799999999
Q ss_pred HHHHHHHHHHhCCcceeecceecCCCCCChhhHHHHHHHHHHHHHHHhh-cCCceeeccc-cccCCCCCCCCCCCCCHHH
Q 018326 165 GLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALN-DHHVLLEGTL-LKPNMVTPGSEAPKVTPDV 242 (358)
Q Consensus 165 ~LAryA~icQ~~GLVPIVEPEVl~dgdh~ie~~~~vt~~vl~~v~~~L~-~~~V~Leg~l-LKpnmv~pG~~~~~~~~~e 242 (358)
+|||||++||++||||||||||+|||. |.+.|+++....+.+.++.|. ++.|||+.|| -++|+|.+-.+
T Consensus 159 qlaryA~~~q~~GLVPIVEPEVli~~~-~k~~~e~~l~~~i~~~l~~l~~~~~vmlkltlp~~~~~Y~~l~~-------- 229 (296)
T PRK05377 159 QQFEVAKQILAAGLVPIIEPEVDINSP-DKAEAEAILKAEILKQLDALPEDQQVMLKLTIPTEANLYKELID-------- 229 (296)
T ss_pred HHHHHHHHHHHcCCCceECCeECCCCc-CHHHHHHHHHHHHHHHHhhCCCCCeEEEEEecCCCCCcchhhcc--------
Confidence 999999999999999999999999999 557777777666666666665 7899999999 66666666555
Q ss_pred HHHHHHHHhhccCCCCCceEEecCCCCCHHHHHHHHHHhcccCCCCCCeeEEeehhhhcHHHH
Q 018326 243 IAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTL 305 (358)
Q Consensus 243 vA~~Tv~~l~r~vP~aVpgVvFLSGG~s~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~~~l 305 (358)
||.|++||+||||||++||+.+|.. |+ +|++||||||.+++.
T Consensus 230 -------------hp~v~rvVaLSGGysr~eA~~~L~~-n~-------g~iASfSRal~egl~ 271 (296)
T PRK05377 230 -------------HPRVLRVVALSGGYSRDEANELLAR-NH-------GLIASFSRALTEGLS 271 (296)
T ss_pred -------------CCCeeEEEEccCCcCHHHHHHHHhh-CC-------CcEEEehHHhhCcCC
Confidence 5999999999999999999999998 75 999999999999864
No 11
>cd00949 FBP_aldolase_I_bact Fructose-1.6-bisphosphate aldolase found in gram +/- bacteria. The enzyme catalyzes the cleavage of fructose 1,6-bisphosphate to glyceraldehyde 3-phosphate and dihydroxyacetone phosphate (DHAP). The enzyme is member of the class I aldolase family, which utilizes covalent catalysis through a Schiff base formed between a lysine residue of the enzyme and ketose substrates.
Probab=100.00 E-value=7.4e-83 Score=606.88 Aligned_cols=244 Identities=33% Similarity=0.391 Sum_probs=217.2
Q ss_pred hcCCCCceE-eecCCCCChHHHhhhCCCCCc-----cchH---hhhhhhhcccCCc-CCceeEEeeccccccccccCCcc
Q 018326 19 IGTPGKGIL-AADESTGTIGKRLSSINVENV-----ESNR---RALRELLFCTPGA-LQYLSGVILFEETLYQKTAAGKP 88 (358)
Q Consensus 19 ~~a~gKGiL-AaDES~gt~~Krl~~~Gvent-----e~nr---r~yR~~l~ttp~~-~~~IsGvILfeETl~q~~~~G~~ 88 (358)
=+++||||| |+|||+|||||||+.|||||| |+|| |+||++|||||+| ++||||||||||||+|+ .||+|
T Consensus 6 ~~~~GKGilAAlDES~GT~~Krl~~iGVent~y~~eee~r~~ih~~R~~lftsp~f~~~~IsGaILFEeTl~q~-~dG~p 84 (292)
T cd00949 6 RMKSGKGFIAALDQSGGSTPKALAAYGIEEDAYSNEEEMFDLVHEMRTRIITSPAFDGDKILGAILFEQTMDRE-IEGKP 84 (292)
T ss_pred hccCCCceEEehhccCCchHHHHHHcCCCCCCCCChHHHHHHHHHHhhccccCccccccceEEEEccHHhhcCc-cCCcC
Confidence 368999999 559999999999999999999 7787 5999999999995 69999999999999997 89999
Q ss_pred chHHHhhCC-CcceeecCCccccccCCCCCc---ccCChhhHHHHHHHHhHcCCcceeeeeeeecCCCCchHHHHHHHHH
Q 018326 89 FVDVLKEGG-VLPGIKVDKGTVELAGTNGET---TTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENAN 164 (358)
Q Consensus 89 ~~~~L~~~G-IvpGIKvDkGl~~l~~~~ge~---~t~GLD~L~~R~~~y~~~Ga~FaKWRsVi~i~~~~Ps~~aI~~na~ 164 (358)
|+++||++| ||||||||||++|++ +||+ +|+|||+|++||++|+ ++||||||||+|++. .+|.++++
T Consensus 85 ~~d~L~e~ggIVPgIKVDKGl~~la--~Ge~lmk~~~GLD~Ll~R~~~~~---~~GaKwRsVIki~~~----~~i~aiv~ 155 (292)
T cd00949 85 TADYLWEKKQIVPFLKVDKGLAEEK--NGVQLMKPIPNLDELLMRAKEKG---VFGTKMRSVIKEANP----KGIAAVVD 155 (292)
T ss_pred HHHHHHhcCCeeeEEEecCCcccCC--CCcccCcCCccHHHHHHHHHHhC---CCCcceeeEeecCCc----chHHHHHH
Confidence 999999775 999999999999996 8998 7889999999999985 555999999999985 56677788
Q ss_pred HHHHHHHHHHhCCcceeecceecCCCCCChhhHHHHHHHHHHHHHHHhh----cCCceeeccc-cccCCCCCCCCCCCCC
Q 018326 165 GLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALN----DHHVLLEGTL-LKPNMVTPGSEAPKVT 239 (358)
Q Consensus 165 ~LAryA~icQ~~GLVPIVEPEVl~dgdh~ie~~~~vt~~vl~~v~~~L~----~~~V~Leg~l-LKpnmv~pG~~~~~~~ 239 (358)
++++||++||++||||||||||+|+.. ..+++.+.++.++.++|+ ++.|||+.|| -++|+|.+-.+
T Consensus 156 qq~~lA~~cq~~GLVPIVEPEVli~~~----~k~~~e~~l~~~i~~~l~~l~~~~~vmlkltlp~~~~~y~~l~~----- 226 (292)
T cd00949 156 QQFELAKQILSHGLVPIIEPEVDIHSA----DKAKCEAILKAEILKHLDKLPEGQQVMLKLTLPTEANFYSELIE----- 226 (292)
T ss_pred HHHHHHHHHHHcCCCceECceECCCCc----cHHHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCCcChhHHHhc-----
Confidence 888899999999999999999999755 346777777888888886 7889999999 56666555555
Q ss_pred HHHHHHHHHHHhhccCCCCCceEEecCCCCCHHHHHHHHHHhcccCCCCCCeeEEeehhhhcHHHH
Q 018326 240 PDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTL 305 (358)
Q Consensus 240 ~~evA~~Tv~~l~r~vP~aVpgVvFLSGG~s~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~~~l 305 (358)
+|.|.+||+||||||++||+..|.. |+ +|++||||||.+++.
T Consensus 227 ----------------hp~v~rvvalsggysr~~a~~~l~~-n~-------g~iasfsral~egl~ 268 (292)
T cd00949 227 ----------------HPKVLRVVALSGGYSREEANELLAK-NN-------GVIASFSRALTEGLS 268 (292)
T ss_pred ----------------CCCeEEEEEcCCCcCHHHHHHHHhh-CC-------CcEEEehHHhhCcCC
Confidence 5999999999999999999999998 75 999999999999863
No 12
>PRK12399 tagatose 1,6-diphosphate aldolase; Reviewed
Probab=97.71 E-value=0.0082 Score=60.03 Aligned_cols=270 Identities=20% Similarity=0.228 Sum_probs=162.2
Q ss_pred CCCCceEe---ecCCCCChHHHhhhCC-CCCccchHhhhhhhhcccCCcCCceeEEeeccccccccccCCccchHHH-hh
Q 018326 21 TPGKGILA---ADESTGTIGKRLSSIN-VENVESNRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVL-KE 95 (358)
Q Consensus 21 a~gKGiLA---aDES~gt~~Krl~~~G-vente~nrr~yR~~l~ttp~~~~~IsGvILfeETl~q~~~~G~~~~~~L-~~ 95 (358)
.+.+|+++ .||- |++.|-|.+.+ -+.+.+.=..+-.++ +..|+.|-|++.|.+|==. |-.+.+ ++
T Consensus 13 s~~~G~i~aLA~DQR-gslkkm~a~~~~~~~~~~~i~~fK~lv--s~~Ltp~ASaILlDpeygl-------pa~~~~~~~ 82 (324)
T PRK12399 13 SNENGIISALAFDQR-GALKRMMAQHQTEEPTVAQIEELKVLV--SEELTPYASSILLDPEYGL-------PASKARDED 82 (324)
T ss_pred cCCCCCEEEEEeccH-HHHHHHHHhccCCCCCHHHHHHHHHHH--HHHhccccceeeeccccCc-------hhhcccCcC
Confidence 44566554 4995 57888888876 333444556676666 4568889998888766322 222333 35
Q ss_pred CCCcceeecCCccccccCCCC-CcccCC-hhhHHH--HHHHHhHcCCcceeeeeeeecCCCCchHHHHH-HHHHHHHHHH
Q 018326 96 GGVLPGIKVDKGTVELAGTNG-ETTTQG-LDGLAQ--RCQKYYEAGARFAKWRAVLKIGPNEPSQLAIN-ENANGLARYA 170 (358)
Q Consensus 96 ~GIvpGIKvDkGl~~l~~~~g-e~~t~G-LD~L~~--R~~~y~~~Ga~FaKWRsVi~i~~~~Ps~~aI~-~na~~LAryA 170 (358)
.|++-.. +..| +..++| |++|.. -.++.+++||.+.|-=--++.++. ..|+ .+-.-+-|..
T Consensus 83 ~GLllay----------EktGyD~~~~gRl~~ll~~wS~~rike~GadavK~Llyy~pD~~----~~in~~k~a~vervg 148 (324)
T PRK12399 83 AGLLLAY----------EKTGYDATTTGRLPDCLDDWSAKRIKEEGADAVKFLLYYDVDEP----DEINEQKKAYIERIG 148 (324)
T ss_pred CceEEEe----------hhhCCccCCCCCcccccchhhHHHHHHhCCCeEEEEEEECCCCC----HHHHHHHHHHHHHHH
Confidence 5555441 1222 233444 555533 233445789999998777776653 3333 3444567889
Q ss_pred HHHHhCCcceeecceecC--CCCCChhhHHHH-HHHHHHHHHHHhhc--CCceeecccccc------CCCCCCCCC--CC
Q 018326 171 IICQENGLVPIVEPEILV--DGPHDINKCADV-TERVLAACYKALND--HHVLLEGTLLKP------NMVTPGSEA--PK 237 (358)
Q Consensus 171 ~icQ~~GLVPIVEPEVl~--dgdh~ie~~~~v-t~~vl~~v~~~L~~--~~V~Leg~lLKp------nmv~pG~~~--~~ 237 (358)
+-|.++||-=++||=+.- -+|.+-.+.+++ -++|+. -.+.+.+ .||+ +||- |+| -|... ..
T Consensus 149 ~eC~a~dipf~lE~ltY~~~~~d~~~~~yak~kP~~V~~-a~kefs~~~~gvD----VlKvEvPvn~~~v-eG~~~~e~~ 222 (324)
T PRK12399 149 SECVAEDIPFFLEILTYDEKIADNGSVEYAKVKPHKVNE-AMKVFSKPRFGVD----VLKVEVPVNMKYV-EGFAEGEVV 222 (324)
T ss_pred HHHHHCCCCeEEEEeeccCcccccccHHHHhhChHHHHH-HHHHhccCCCCCc----EEEEecccccccc-cccCccccc
Confidence 999999999999997633 123333455666 555555 5777765 6775 3444 334 33332 33
Q ss_pred CCHHHHHHHHHHHhhccCCCCCceEEecCCCCCHHHHHHHHHHhcccCCCCCCeeEEeehhhhcHHHHHHhcCCcccHHH
Q 018326 238 VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQK 317 (358)
Q Consensus 238 ~~~~evA~~Tv~~l~r~vP~aVpgVvFLSGG~s~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~~~l~~W~G~~~nv~~ 317 (358)
++-+|.+ .-++-+.+. ..+|=| |||+|-|.+.=..-|.--..... . --.|-.|||+=.++++.+...++ ++
T Consensus 223 yt~~eA~-~~f~~~~~~--~~~P~i-~LSaGV~~~~F~~~l~~A~~aGa--~-fsGvL~GRAtW~~~v~~~~~~g~--~~ 293 (324)
T PRK12399 223 YTKEEAA-QHFKEQDAA--THLPYI-YLSAGVSAELFQETLVFAHEAGA--K-FNGVLCGRATWAGSVKVYIEQGE--AA 293 (324)
T ss_pred ccHHHHH-HHHHHHhhc--cCCCEE-EEcCCCCHHHHHHHHHHHHHcCC--C-cceEEeehhhhHhhhhhhhcCCH--HH
Confidence 4555544 334334443 566654 99999998877666664222111 1 13678999999999998865433 56
Q ss_pred HHHHHHHHHHhc
Q 018326 318 AQAAFLVRCKAN 329 (358)
Q Consensus 318 AQ~~l~~ra~~n 329 (358)
+++-|...++.|
T Consensus 294 ~~ewL~t~g~~n 305 (324)
T PRK12399 294 AREWLRTEGFEN 305 (324)
T ss_pred HHHHHHHHhHHH
Confidence 666666666555
No 13
>PRK04161 tagatose 1,6-diphosphate aldolase; Reviewed
Probab=97.23 E-value=0.066 Score=53.82 Aligned_cols=270 Identities=19% Similarity=0.211 Sum_probs=159.1
Q ss_pred CCCCceEee---cCCCCChHHHhhhCC-CCCccchHhhhhhhhcccCCcCCceeEEeeccccccccccCCccchHHH-hh
Q 018326 21 TPGKGILAA---DESTGTIGKRLSSIN-VENVESNRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVL-KE 95 (358)
Q Consensus 21 a~gKGiLAa---DES~gt~~Krl~~~G-vente~nrr~yR~~l~ttp~~~~~IsGvILfeETl~q~~~~G~~~~~~L-~~ 95 (358)
.+.+|++++ ||- |++.|-|.+.+ -+.+.+.=..+-.++ +..|+.|-|++.|.+|==.. =...+ .+
T Consensus 15 s~~~G~i~aLAiDQR-gslkkm~a~~~~~~~~~~~i~~fK~lv--s~~Ltp~ASaILlDpeyglp-------a~~~~~~~ 84 (329)
T PRK04161 15 SNSQGIISALAFDQR-GALKRMMAAHQEGEATVTQIETLKVLV--SEELTPYASSILLDPEYGLP-------ATKVRANQ 84 (329)
T ss_pred cCCCCCEEEEEecch-HHHHHHHHhcCCCCCcHHHHHHHHHHH--HHHhhhhcceeeeccccCcc-------chhccCCC
Confidence 446666544 995 67888888775 444444456676666 45688888887776663221 11222 24
Q ss_pred CCCcceeecCCccccccCCCC--CcccCChhhHHH--HHHHHhHcCCcceeeeeeeecCCCCchHHHH-HHHHHHHHHHH
Q 018326 96 GGVLPGIKVDKGTVELAGTNG--ETTTQGLDGLAQ--RCQKYYEAGARFAKWRAVLKIGPNEPSQLAI-NENANGLARYA 170 (358)
Q Consensus 96 ~GIvpGIKvDkGl~~l~~~~g--e~~t~GLD~L~~--R~~~y~~~Ga~FaKWRsVi~i~~~~Ps~~aI-~~na~~LAryA 170 (358)
.|++-.. +..| ++...-|++|++ -.++.+++||.+.|-=--++.++. ..| ..+-.-+-|..
T Consensus 85 ~GLllay----------EktGyD~~~~gRl~~ll~~ws~~rike~GadavK~Llyy~pD~~----~ein~~k~a~vervg 150 (329)
T PRK04161 85 TGLLLAY----------EKTGYDATTTSRLPDCLVEWSVKRLKEAGADAVKFLLYYDVDGD----EEINDQKQAYIERIG 150 (329)
T ss_pred CceEEee----------cccCcccCCCCccccccchhhHHHHHHhCCCeEEEEEEECCCCC----HHHHHHHHHHHHHHH
Confidence 4544441 1111 222333656653 445556789999998777776643 333 34445567889
Q ss_pred HHHHhCCcceeecceecC---CCCCChhhHHHHHHHHHHHHHHHhhc--CCceeecccccc------CCCCCCCCC--CC
Q 018326 171 IICQENGLVPIVEPEILV---DGPHDINKCADVTERVLAACYKALND--HHVLLEGTLLKP------NMVTPGSEA--PK 237 (358)
Q Consensus 171 ~icQ~~GLVPIVEPEVl~---dgdh~ie~~~~vt~~vl~~v~~~L~~--~~V~Leg~lLKp------nmv~pG~~~--~~ 237 (358)
+-|.++||-=++||=+-. +..++.+-+..--++|+.. .+.+.+ .||++ ||- |+| -|... ..
T Consensus 151 ~eC~a~dipf~lE~l~Yd~~~~d~~~~eyak~kP~~V~~a-mkefs~~~~gvDV----lKvEvPvn~~~v-eG~~~g~~~ 224 (329)
T PRK04161 151 SECTAEDIPFFLELLTYDERISDNNSAAYAKLKPHKVNGA-MKVFSDKRFGVDV----LKVEVPVNMAYV-EGFTEGEVV 224 (329)
T ss_pred HHHHHCCCCeEEEEeccCCcccccccHHHHhhChHHHHHH-HHHhccCCCCCcE----EEEecccccccc-cccCccccc
Confidence 999999999999986532 2233333322225556664 577764 67753 444 444 23222 34
Q ss_pred CCHHHHHHHHHHHhhccCCCCCceEEecCCCCCHHHHHHHHHHhcccCCCCCCeeEEeehhhhcHHHHHHhcCCcccHHH
Q 018326 238 VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQK 317 (358)
Q Consensus 238 ~~~~evA~~Tv~~l~r~vP~aVpgVvFLSGG~s~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~~~l~~W~G~~~nv~~ 317 (358)
+|-+|.+ .-++-+.+. ..+|=| |||+|-|.+.=..-|.--..... . --.|-.|||+=.++++.+..+.+ ++
T Consensus 225 yt~~eA~-~~f~~~~~~--~~~P~i-~LSaGV~~~~F~~~l~~A~~aGa--~-fnGvL~GRAtW~~~v~~~~~~g~--~a 295 (329)
T PRK04161 225 YSQEEAI-KAFKDQEAA--THLPYI-YLSAGVSAKLFQETLVFAAEAGA--Q-FNGVLCGRATWAGSVPVYITEGE--EA 295 (329)
T ss_pred ccHHHHH-HHHHHHhcc--cCCCEE-EEcCCCCHHHHHHHHHHHHhcCC--C-cccEEeehhhhhhhhhhhhcCCH--HH
Confidence 5556643 334334444 566654 99999998877766663222111 1 12577999999999998865433 56
Q ss_pred HHHHHHHHHHhc
Q 018326 318 AQAAFLVRCKAN 329 (358)
Q Consensus 318 AQ~~l~~ra~~n 329 (358)
+++-|....+.|
T Consensus 296 ~~~wL~t~g~~n 307 (329)
T PRK04161 296 ARKWLCTEGFQN 307 (329)
T ss_pred HHHHHHHHhHHH
Confidence 666666555555
No 14
>TIGR01232 lacD tagatose 1,6-diphosphate aldolase. This family consists of Gram-positive proteins. Tagatose 1,6-diphosphate aldolase is part of the tagatose-6-phosphate pathway of galactose-6-phosphate degradation.
Probab=97.19 E-value=0.092 Score=52.72 Aligned_cols=273 Identities=18% Similarity=0.213 Sum_probs=159.6
Q ss_pred CCCCceEe---ecCCCCChHHHhhhCC-CCCccchHhhhhhhhcccCCcCCceeEEeeccccccccccCCccchHHH-hh
Q 018326 21 TPGKGILA---ADESTGTIGKRLSSIN-VENVESNRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVL-KE 95 (358)
Q Consensus 21 a~gKGiLA---aDES~gt~~Krl~~~G-vente~nrr~yR~~l~ttp~~~~~IsGvILfeETl~q~~~~G~~~~~~L-~~ 95 (358)
.+.+|+++ .||- |++.|-|.+.+ -+.+.+.=..+-.++ +..|+.|-|++.|.+|==. |-.+.+ ++
T Consensus 14 s~~~G~i~aLAiDQR-gslkkm~a~~~~~~~~~~~i~~fK~lv--s~~LtpyASaILlDpeygl-------pa~~~~~~~ 83 (325)
T TIGR01232 14 SNNEGIISALAFDQR-GALKRLMAKHQTEEPTVAQIEQLKVLV--AEELTQYASSILLDPEYGL-------PASDARNKD 83 (325)
T ss_pred cCCCCCEEEEEecch-HHHHHHHHhcCCCCCcHHHHHHHHHHH--HHHhccccceEeEccccCc-------chhhccCcC
Confidence 44566554 4995 67888888875 333444556676666 4568889998888776433 222333 45
Q ss_pred CCCcceeecCCccccccCCCCCcccCChhhHHHH--HHHHhHcCCcceeeeeeeecCCCCchHHHHHHHHHHHHHHHHHH
Q 018326 96 GGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQR--CQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIIC 173 (358)
Q Consensus 96 ~GIvpGIKvDkGl~~l~~~~ge~~t~GLD~L~~R--~~~y~~~Ga~FaKWRsVi~i~~~~Ps~~aI~~na~~LAryA~ic 173 (358)
.|++-. .|+ .|- .++...-|++|+.- .++.+++||.+.|-=--++.++. +..=..+-.-+-|..+-|
T Consensus 84 ~GLlla--yEk-----tGy-d~~~~gRl~~ll~~~s~~rike~GadavK~Llyy~pD~~---~ein~~k~a~vervg~ec 152 (325)
T TIGR01232 84 CGLLLA--YEK-----TGY-DVNAKGRLPDCLVEWSAKRLKEQGANAVKFLLYYDVDDA---EEINIQKKAYIERIGSEC 152 (325)
T ss_pred CceEEE--eHh-----hCC-cCCCCCcCccccccccHHHHHHhCCCeEEEEEEeCCCCC---hHHHHHHHHHHHHHHHHH
Confidence 566554 222 111 11222235555332 44456789999998777776642 222234555667899999
Q ss_pred HhCCcceeecceecC---CCCCChhhHHHH-HHHHHHHHHHHhhc--CCceeeccccccCCCC-----CCCCC--CCCCH
Q 018326 174 QENGLVPIVEPEILV---DGPHDINKCADV-TERVLAACYKALND--HHVLLEGTLLKPNMVT-----PGSEA--PKVTP 240 (358)
Q Consensus 174 Q~~GLVPIVEPEVl~---dgdh~ie~~~~v-t~~vl~~v~~~L~~--~~V~Leg~lLKpnmv~-----pG~~~--~~~~~ 240 (358)
.++||-=++||=+-- ...++.+ -+++ -++|+. -.+.+.+ .||++ ||-=+=. -|... ..+|-
T Consensus 153 ~a~dipf~lE~ltYd~~~~~~~~~~-yak~kP~~V~~-a~kefs~~~~gvDV----lKvEvPvn~~~veG~~~~e~~yt~ 226 (325)
T TIGR01232 153 VAEDIPFFLEVLTYDDNIPDNGSVE-FAKVKPRKVNE-AMKLFSEPRFNVDV----LKVEVPVNVKYVEGFAEGEVVYTK 226 (325)
T ss_pred HHCCCCeEEEEeccCCCCCCCCcHH-HHHhChHHHHH-HHHHhccCCCCCcE----EEEecccccccccccCcccccccH
Confidence 999999999986642 1233333 4445 555555 4677776 67753 4433211 23222 23344
Q ss_pred HHHHHHHHHHhhccCCCCCceEEecCCCCCHHHHHHHHHHhcccCCCCCCeeEEeehhhhcHHHHHHhcCCcccHHHHHH
Q 018326 241 DVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQA 320 (358)
Q Consensus 241 ~evA~~Tv~~l~r~vP~aVpgVvFLSGG~s~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~~~l~~W~G~~~nv~~AQ~ 320 (358)
+|.+. -++-+.+. ..+|=| |||+|-|.+.=..-|.--... + .. --.|-.|||+=.++++.+...++ +++++
T Consensus 227 ~eA~~-~f~eq~~~--~~~P~i-~LSaGV~~~~F~~~l~~A~~a-G-a~-fsGvL~GRAtW~~~v~~~~~~g~--~~~~e 297 (325)
T TIGR01232 227 EEAAQ-HFKDQDAA--THLPYI-YLSAGVSAELFQETLKFAHEA-G-AK-FNGVLCGRATWSGAVQVYIEQGE--DAARE 297 (325)
T ss_pred HHHHH-HHHHHhhc--cCCCEE-EEcCCCCHHHHHHHHHHHHHc-C-CC-cceEEeehhhhHhhhhhhhcCCH--HHHHH
Confidence 55432 23322223 556654 999999988776666632221 1 01 13678999999999998865433 56666
Q ss_pred HHHHHHHhc
Q 018326 321 AFLVRCKAN 329 (358)
Q Consensus 321 ~l~~ra~~n 329 (358)
-|...++.|
T Consensus 298 wL~t~g~~n 306 (325)
T TIGR01232 298 WLRTTGFKN 306 (325)
T ss_pred HHHHHhHHH
Confidence 666666555
No 15
>PRK12858 tagatose 1,6-diphosphate aldolase; Reviewed
Probab=96.95 E-value=0.09 Score=52.89 Aligned_cols=272 Identities=22% Similarity=0.209 Sum_probs=142.8
Q ss_pred HhcC-CCCc-eEeecCCCCChHHHhhhC-CCCCccchHhhhhhhhcccCCcCCceeEEeeccccccccccCCccchHHHh
Q 018326 18 YIGT-PGKG-ILAADESTGTIGKRLSSI-NVENVESNRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLK 94 (358)
Q Consensus 18 ~~~a-~gKG-iLAaDES~gt~~Krl~~~-Gvente~nrr~yR~~l~ttp~~~~~IsGvILfeETl~q~~~~G~~~~~~L~ 94 (358)
+|.. +|+- +||.|+ -|.+.+-+.+. +-+.+...=..+..++.. .+..+.||++|..+ +..-.. .....
T Consensus 12 rl~~~~G~~~~lAiDH-rG~l~~m~~~~~~~~~~~~~l~~~K~lv~~--~l~~~asaILld~~-yG~~a~-----~~~~~ 82 (340)
T PRK12858 12 ALADERGVIAAAAMDQ-RGSLKKMLAKARGDEASYTDLVDFKLAVSE--ALTPYASAILLDPE-YGLPAA-----KVRDP 82 (340)
T ss_pred HHhCCCCCEEEEecCC-ccHHHHHHHhccccCcchhhHHHHHHHHHH--HHhhCCCEEEEccc-cChhhh-----cccCC
Confidence 3443 3442 344499 78888777652 122233333566666533 35556777777643 322111 11124
Q ss_pred hCCCcceeecCCccccccCCCCCcccCC-hhhH-----HHHHHHHhHcCCcceeeeeeeecCCCCchHHHH-HHHHHHHH
Q 018326 95 EGGVLPGIKVDKGTVELAGTNGETTTQG-LDGL-----AQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAI-NENANGLA 167 (358)
Q Consensus 95 ~~GIvpGIKvDkGl~~l~~~~ge~~t~G-LD~L-----~~R~~~y~~~Ga~FaKWRsVi~i~~~~Ps~~aI-~~na~~LA 167 (358)
+.|++.. +|+. |.+ . .+.| ++++ .+++ ..+||..-|--.-+..++ ...| ..+-..+.
T Consensus 83 ~~GLil~--~e~t-----g~d-~-t~~gr~~~~~~~~sve~a---~~~GAdAVk~lv~~~~d~----~~~~~~~~~~~l~ 146 (340)
T PRK12858 83 NCGLLLS--YEKT-----GYD-A-TAPGRLPDLLDNWSVRRI---KEAGADAVKLLLYYRPDE----DDAINDRKHAFVE 146 (340)
T ss_pred CCCeEEE--eccc-----ccc-c-CCCCCCccccccccHHHH---HHcCCCEEEEEEEeCCCc----chHHHHHHHHHHH
Confidence 6676655 4441 100 0 0111 2222 3444 467998888655555332 1223 44555799
Q ss_pred HHHHHHHhCCcceeecceecCCCCCChhh--HHHHHHHHHHHHHHHhh--cCCceeeccccccCC-----CCCCCCC--C
Q 018326 168 RYAIICQENGLVPIVEPEILVDGPHDINK--CADVTERVLAACYKALN--DHHVLLEGTLLKPNM-----VTPGSEA--P 236 (358)
Q Consensus 168 ryA~icQ~~GLVPIVEPEVl~dgdh~ie~--~~~vt~~vl~~v~~~L~--~~~V~Leg~lLKpnm-----v~pG~~~--~ 236 (358)
|.+..|++.|+-=++||=+...|..+-.. -+++....+....+.+. +.||+ ++|-.+ ...|.+. .
T Consensus 147 rv~~ec~~~giPlllE~l~y~~~~~~~~~~~~a~~~p~~V~~a~r~~~~~elGaD----vlKve~p~~~~~veg~~~~~~ 222 (340)
T PRK12858 147 RVGAECRANDIPFFLEPLTYDGKGSDKKAEEFAKVKPEKVIKTMEEFSKPRYGVD----VLKVEVPVDMKFVEGFDGFEE 222 (340)
T ss_pred HHHHHHHHcCCceEEEEeccCCCccccccccccccCHHHHHHHHHHHhhhccCCe----EEEeeCCCCcccccccccccc
Confidence 99999999999668876444443322111 12222223344556666 47885 345432 2244332 2
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCceEEecCCCCCHHHHHHHHHHhcccCCCCCCe--eEEeehhhhcHHHHHHhcCCccc
Q 018326 237 KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWS--LSFSFGRALQQSTLKAWAGKEEN 314 (358)
Q Consensus 237 ~~~~~evA~~Tv~~l~r~vP~aVpgVvFLSGG~s~eeAt~~LnaiN~~~~~~PW~--lsFSfgRALq~~~l~~W~G~~~n 314 (358)
.++-++.+. ++.-+.+. ..+ -++|||||-|.++--..|...-. .+ . -.+.+||++=++.+..|...++
T Consensus 223 ~~~~~~~~~-~f~~~~~a--~~~-P~vvlsgG~~~~~f~~~l~~A~~-aG----a~f~Gvl~GRniwq~~v~~~~~~~~- 292 (340)
T PRK12858 223 AYTQEEAFK-LFREQSDA--TDL-PFIFLSAGVSPELFRRTLEFACE-AG----ADFSGVLCGRATWQDGIEPYAAEGE- 292 (340)
T ss_pred cccHHHHHH-HHHHHHhh--CCC-CEEEECCCCCHHHHHHHHHHHHH-cC----CCccchhhhHHHHhhhhccccCCCH-
Confidence 334444333 23222333 234 46799999998886666653222 12 2 4688999999999998866543
Q ss_pred HHHHHHHHHHHHHhc
Q 018326 315 VQKAQAAFLVRCKAN 329 (358)
Q Consensus 315 v~~AQ~~l~~ra~~n 329 (358)
+++++-|-..++.|
T Consensus 293 -~~~~~~l~~~g~~~ 306 (340)
T PRK12858 293 -EARRAWLNTEGVAN 306 (340)
T ss_pred -HHHHHHHHHHhHHH
Confidence 44444444444433
No 16
>cd00958 DhnA Class I fructose-1,6-bisphosphate (FBP) aldolases of the archaeal type (DhnA homologs) found in bacteria and archaea. Catalysis of the enzymes proceeds via a Schiff-base mechanism like other class I aldolases, although this subfamily is clearly divergent based on sequence similarity to other class I and class II (metal dependent) aldolase subfamilies.
Probab=91.20 E-value=6.2 Score=36.55 Aligned_cols=151 Identities=21% Similarity=0.242 Sum_probs=79.6
Q ss_pred HHHHHHHHhHcCCcceeeeeeeecCCCCchHHHHHHHHHHHHHHHHHHHhCCcceeecceecCCCCCChhhHHHHHHHHH
Q 018326 126 LAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVL 205 (358)
Q Consensus 126 L~~R~~~y~~~Ga~FaKWRsVi~i~~~~Ps~~aI~~na~~LAryA~icQ~~GLVPIVEPEVl~dgdh~ie~~~~vt~~vl 205 (358)
+.....+..+.||..-... +++... .-.+..+.+.+....|.+.|+--|| |+..+|.|--+. .+...+
T Consensus 78 ~~~~v~~a~~~Ga~~v~~~--~~~~~~-----~~~~~~~~i~~v~~~~~~~g~~~ii--e~~~~g~~~~~~---~~~~~i 145 (235)
T cd00958 78 LVASVEDAVRLGADAVGVT--VYVGSE-----EEREMLEELARVAAEAHKYGLPLIA--WMYPRGPAVKNE---KDPDLI 145 (235)
T ss_pred hhcCHHHHHHCCCCEEEEE--EecCCc-----hHHHHHHHHHHHHHHHHHcCCCEEE--EEeccCCcccCc---cCHHHH
Confidence 3334455556786643222 333321 1367777888888899999998888 456678774321 111112
Q ss_pred HHHHHHhhcCCceeeccccccCCCCCCCCCCCCCHHHHHHHHHHHhhccCCCCCceEEecCCC---CCHHHHHHHHHHhc
Q 018326 206 AACYKALNDHHVLLEGTLLKPNMVTPGSEAPKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGG---QSEEEATRNLNAMN 282 (358)
Q Consensus 206 ~~v~~~L~~~~V~Leg~lLKpnmv~pG~~~~~~~~~evA~~Tv~~l~r~vP~aVpgVvFLSGG---~s~eeAt~~LnaiN 282 (358)
....+...+.|.+ ++|.+. +.+ .+. ++.+.+.+| +| ++.||| .+.+++-.|+..+-
T Consensus 146 ~~~~~~a~~~GaD----~Ik~~~-~~~-------~~~-----~~~i~~~~~--~p--vv~~GG~~~~~~~~~l~~~~~~~ 204 (235)
T cd00958 146 AYAARIGAELGAD----IVKTKY-TGD-------AES-----FKEVVEGCP--VP--VVIAGGPKKDSEEEFLKMVYDAM 204 (235)
T ss_pred HHHHHHHHHHCCC----EEEecC-CCC-------HHH-----HHHHHhcCC--CC--EEEeCCCCCCCHHHHHHHHHHHH
Confidence 2212222244554 334431 111 122 223333444 45 367788 46777767766544
Q ss_pred ccCCCCCCeeEEeehhhhcHHHHHHhcCCcccHHHHHHHHH
Q 018326 283 QLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFL 323 (358)
Q Consensus 283 ~~~~~~PW~lsFSfgRALq~~~l~~W~G~~~nv~~AQ~~l~ 323 (358)
+.. .=.+++||++.+ .+|..++.++|.
T Consensus 205 ~~G-----a~gv~vg~~i~~---------~~dp~~~~~~~~ 231 (235)
T cd00958 205 EAG-----AAGVAVGRNIFQ---------RPDPVAMLRAIS 231 (235)
T ss_pred HcC-----CcEEEechhhhc---------CCCHHHHHHHHH
Confidence 432 226799999863 246666555543
No 17
>PRK07226 fructose-bisphosphate aldolase; Provisional
Probab=88.41 E-value=9.8 Score=36.50 Aligned_cols=155 Identities=19% Similarity=0.261 Sum_probs=84.8
Q ss_pred hHHHHHHHHhHcCCcceeeeeeeecCCCCchHHHHHHHHHHHHHHHHHHHhCCcceeecceecCCCCCChhhHHHHHHHH
Q 018326 125 GLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERV 204 (358)
Q Consensus 125 ~L~~R~~~y~~~Ga~FaKWRsVi~i~~~~Ps~~aI~~na~~LAryA~icQ~~GLVPIVEPEVl~dgdh~ie~~~~vt~~v 204 (358)
.+...+.+..+.||..-+.|.-+. .. .-.+..+.+.+...+|++.|+.=||. +..+|.|- +.+.... .
T Consensus 94 ~~~~~ve~A~~~Gad~v~~~~~~g--~~-----~~~~~~~~~~~v~~~~~~~g~pl~vi--~~~~g~~~-e~~~~~~--~ 161 (267)
T PRK07226 94 VLVGTVEEAIKLGADAVSVHVNVG--SE-----TEAEMLEDLGEVAEECEEWGMPLLAM--MYPRGPGI-KNEYDPE--V 161 (267)
T ss_pred eeeecHHHHHHcCCCEEEEEEecC--Ch-----hHHHHHHHHHHHHHHHHHcCCcEEEE--EecCCCcc-CCCccHH--H
Confidence 344455566678988777664443 21 02445667777888999999755553 34556653 4433221 1
Q ss_pred HHHHHHHhhcCCceeeccccccCCCCCCCCCCCCCHHHHHHHHHHHhhccCC-CCCceEEecCCCCC---HHHHHHHHHH
Q 018326 205 LAACYKALNDHHVLLEGTLLKPNMVTPGSEAPKVTPDVIAEHTVRALQRTMP-AAVPAVVFLSGGQS---EEEATRNLNA 280 (358)
Q Consensus 205 l~~v~~~L~~~~V~Leg~lLKpnmv~pG~~~~~~~~~evA~~Tv~~l~r~vP-~aVpgVvFLSGG~s---~eeAt~~Lna 280 (358)
+....+...+.|+ .++|+++. | +. ..|++.+. ..+| |+.|||-+ .+++-.++..
T Consensus 162 i~~a~~~a~e~GA----D~vKt~~~--~------~~--------~~l~~~~~~~~ip--V~a~GGi~~~~~~~~l~~v~~ 219 (267)
T PRK07226 162 VAHAARVAAELGA----DIVKTNYT--G------DP--------ESFREVVEGCPVP--VVIAGGPKTDTDREFLEMVRD 219 (267)
T ss_pred HHHHHHHHHHHCC----CEEeeCCC--C------CH--------HHHHHHHHhCCCC--EEEEeCCCCCCHHHHHHHHHH
Confidence 2222333345565 34688832 2 11 22333332 2466 58899987 3577777643
Q ss_pred hcccCCCCCCeeEEeehhhhcHHHHHHhcCCcccHHHHHHHHHHHHH
Q 018326 281 MNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCK 327 (358)
Q Consensus 281 iN~~~~~~PW~lsFSfgRALq~~~l~~W~G~~~nv~~AQ~~l~~ra~ 327 (358)
.-.. + .-..|+||++-+ .+|..++-++|..--.
T Consensus 220 ~~~a-G----A~Gis~gr~i~~---------~~~p~~~~~~l~~~v~ 252 (267)
T PRK07226 220 AMEA-G----AAGVAVGRNVFQ---------HEDPEAITRAISAVVH 252 (267)
T ss_pred HHHc-C----CcEEehhhhhhc---------CCCHHHHHHHHHHHHh
Confidence 2221 2 116789998753 2466666666655443
No 18
>TIGR01949 AroFGH_arch predicted phospho-2-dehydro-3-deoxyheptonate aldolase. Together these two genes appear to perform the synthesis of 3-dehydroquinate. It is presumed that the substrates and the chemical transformations involved are identical, but this has not yet been proven experimentally.
Probab=72.48 E-value=58 Score=30.98 Aligned_cols=151 Identities=16% Similarity=0.198 Sum_probs=83.9
Q ss_pred HHHHHHhHcCCcceeeeeeeecCCCCchHHHHHHHHHHHHHHHHHHHhCCcceeecceecCCCCCChhhHHHHHHHHHHH
Q 018326 128 QRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAA 207 (358)
Q Consensus 128 ~R~~~y~~~Ga~FaKWRsVi~i~~~~Ps~~aI~~na~~LAryA~icQ~~GLVPIVEPEVl~dgdh~ie~~~~vt~~vl~~ 207 (358)
...++..+.||..-..|.-+. .. .-.+..+.+.+...+|.+.|+.=||.. ..+|.|.-... . ..+..
T Consensus 94 ~~v~~al~~Ga~~v~~~~~~g--~~-----~~~~~~~~~~~i~~~~~~~g~~liv~~--~~~Gvh~~~~~--~--~~~~~ 160 (258)
T TIGR01949 94 TTVEDAIRMGADAVSIHVNVG--SD-----TEWEQIRDLGMIAEICDDWGVPLLAMM--YPRGPHIDDRD--P--ELVAH 160 (258)
T ss_pred eeHHHHHHCCCCEEEEEEecC--Cc-----hHHHHHHHHHHHHHHHHHcCCCEEEEE--eccCccccccc--H--HHHHH
Confidence 345555578988777765433 21 124455677788889999998666633 37788854321 1 11222
Q ss_pred HHHHhhcCCceeeccccccCCCCCCCCCCCCCHHHHHHHHHHHhhccCCCCCceEEecCCCCC---HHHHHHHHHHhccc
Q 018326 208 CYKALNDHHVLLEGTLLKPNMVTPGSEAPKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQS---EEEATRNLNAMNQL 284 (358)
Q Consensus 208 v~~~L~~~~V~Leg~lLKpnmv~pG~~~~~~~~~evA~~Tv~~l~r~vP~aVpgVvFLSGG~s---~eeAt~~LnaiN~~ 284 (358)
..+...+.|++. +|.++ ++ +.+.+. -+.+. ..+| | +.+||-+ .+++-.|+..+-+.
T Consensus 161 ~~~~a~~~GADy----ikt~~--~~------~~~~l~-----~~~~~--~~iP-V-va~GGi~~~~~~~~~~~i~~~~~a 219 (258)
T TIGR01949 161 AARLGAELGADI----VKTPY--TG------DIDSFR-----DVVKG--CPAP-V-VVAGGPKTNSDREFLQMIKDAMEA 219 (258)
T ss_pred HHHHHHHHCCCE----EeccC--CC------CHHHHH-----HHHHh--CCCc-E-EEecCCCCCCHHHHHHHHHHHHHc
Confidence 223333455543 33331 11 222222 22222 2344 3 3379985 78888888765543
Q ss_pred CCCCCCeeEEeehhhhcHHHHHHhcCCcccHHHHHHHHHHHH
Q 018326 285 KTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRC 326 (358)
Q Consensus 285 ~~~~PW~lsFSfgRALq~~~l~~W~G~~~nv~~AQ~~l~~ra 326 (358)
.- =.+|.||++.+ .+|..++.++|..--
T Consensus 220 Ga-----~Gia~g~~i~~---------~~dp~~~~~~l~~~i 247 (258)
T TIGR01949 220 GA-----AGVAVGRNIFQ---------HDDPVGITKAVCKIV 247 (258)
T ss_pred CC-----cEEehhhHhhc---------CCCHHHHHHHHHHHH
Confidence 32 27889998864 357777777776643
No 19
>PF01261 AP_endonuc_2: Xylose isomerase-like TIM barrel; InterPro: IPR012307 This TIM alpha/beta barrel structure is found in xylose isomerase (P19148 from SWISSPROT) and in endonuclease IV (P12638 from SWISSPROT, 3.1.21.2 from EC). This domain is also found in the N termini of bacterial myo-inositol catabolism proteins. These are involved in the myo-inositol catabolism pathway, and is required for growth on myo-inositol in Rhizobium leguminosarum bv. viciae []. ; PDB: 3KWS_B 3DX5_A 3CQH_B 3CQI_A 3CQK_A 3CQJ_B 2G0W_B 1DXI_A 2ZDS_D 3TVA_B ....
Probab=55.97 E-value=78 Score=27.38 Aligned_cols=96 Identities=19% Similarity=0.208 Sum_probs=57.6
Q ss_pred chHHHhhCCCc-ceeecCCccccccC----CCCCcccCChhhHHHHHHHHhHcCCcceeeeeeeecC-----CCCchHHH
Q 018326 89 FVDVLKEGGVL-PGIKVDKGTVELAG----TNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIG-----PNEPSQLA 158 (358)
Q Consensus 89 ~~~~L~~~GIv-pGIKvDkGl~~l~~----~~ge~~t~GLD~L~~R~~~y~~~Ga~FaKWRsVi~i~-----~~~Ps~~a 158 (358)
+.+.+++.||- +++-.......... .+.+ .-..++.+.+-+...+.+|++. -++..+ ........
T Consensus 32 ~~~~~~~~gl~i~~~~~~~~~~~~~~~~~~~~~~-r~~~~~~~~~~i~~a~~lg~~~----i~~~~g~~~~~~~~~~~~~ 106 (213)
T PF01261_consen 32 LRRLLEDYGLKIASLHPPTNFWSPDEENGSANDE-REEALEYLKKAIDLAKRLGAKY----IVVHSGRYPSGPEDDTEEN 106 (213)
T ss_dssp HHHHHHHTTCEEEEEEEEESSSCTGTTSTTSSSH-HHHHHHHHHHHHHHHHHHTBSE----EEEECTTESSSTTSSHHHH
T ss_pred HHHHHHHcCCeEEEEecccccccccccccCcchh-hHHHHHHHHHHHHHHHHhCCCc----eeecCcccccccCCCHHHH
Confidence 55677788876 33333333222100 1111 2223666666666666678655 233322 23456678
Q ss_pred HHHHHHHHHHHHHHHHhCCcceeecceecCC
Q 018326 159 INENANGLARYAIICQENGLVPIVEPEILVD 189 (358)
Q Consensus 159 I~~na~~LAryA~icQ~~GLVPIVEPEVl~d 189 (358)
....++.+.+.+.++.+.|+...+||.--..
T Consensus 107 ~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~ 137 (213)
T PF01261_consen 107 WERLAENLRELAEIAEEYGVRIALENHPGPF 137 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHTSEEEEE-SSSSS
T ss_pred HHHHHHHHHHHHhhhhhhcceEEEecccCcc
Confidence 8888899999999999999999999976553
No 20
>PF01791 DeoC: DeoC/LacD family aldolase; InterPro: IPR002915 This family includes the enzyme deoxyribose-phosphate aldolase, which is involved in nucleotide metabolism. 2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde The family also includes a group of related bacterial proteins of unknown function, see examples Q57843 from SWISSPROT and P76143 from SWISSPROT.; GO: 0016829 lyase activity; PDB: 2A4A_A 1VCV_B 1P1X_A 1KTN_B 1JCL_A 1JCJ_A 1MZH_A 3GKF_D 3GLC_L 3GND_N ....
Probab=50.58 E-value=62 Score=30.19 Aligned_cols=151 Identities=21% Similarity=0.259 Sum_probs=78.4
Q ss_pred HHHHHHHhHcCCcceeeeeeeecCCCCchHHHHHHHHHHHHHHHHHHHhCCcceeecceecCCCCCChhhHHHHHHHHHH
Q 018326 127 AQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLA 206 (358)
Q Consensus 127 ~~R~~~y~~~Ga~FaKWRsVi~i~~~~Ps~~aI~~na~~LAryA~icQ~~GLVPIVEPEVl~dgdh~ie~~~~vt~~vl~ 206 (358)
..-+.++.+.||.--+. |+.++...+.. -..+.+.+.+....|+..||-=|+||...-.. .+-+. ...++.
T Consensus 79 ~~~ve~A~~~GAd~vd~--vi~~~~~~~~~--~~~~~~~i~~v~~~~~~~gl~vIlE~~l~~~~-~~~~~----~~~~I~ 149 (236)
T PF01791_consen 79 VAEVEEAIRLGADEVDV--VINYGALGSGN--EDEVIEEIAAVVEECHKYGLKVILEPYLRGEE-VADEK----KPDLIA 149 (236)
T ss_dssp HHHHHHHHHTT-SEEEE--EEEHHHHHTTH--HHHHHHHHHHHHHHHHTSEEEEEEEECECHHH-BSSTT----HHHHHH
T ss_pred HHHHHHHHHcCCceeee--ecccccccccc--HHHHHHHHHHHHHHHhcCCcEEEEEEecCchh-hcccc----cHHHHH
Confidence 56677777899865543 45542111112 57888899999999999999999996542211 00011 112233
Q ss_pred HHHHHhhcCCceeeccccccCCCCCCCCCCCCCHHHHHHHHHHHhhccCC-CCCce-E-EecCCCCCHHHHHHHHHHhcc
Q 018326 207 ACYKALNDHHVLLEGTLLKPNMVTPGSEAPKVTPDVIAEHTVRALQRTMP-AAVPA-V-VFLSGGQSEEEATRNLNAMNQ 283 (358)
Q Consensus 207 ~v~~~L~~~~V~Leg~lLKpnmv~pG~~~~~~~~~evA~~Tv~~l~r~vP-~aVpg-V-vFLSGG~s~eeAt~~LnaiN~ 283 (358)
...+...+.|.+ ++|.+. |+. ..++.+++.. +++.+. ..+|+ + |.+|||-+.++--..|+...+
T Consensus 150 ~a~ria~e~GaD----~vKt~t--g~~--~~~t~~~~~~-----~~~~~~~~~~p~~~~Vk~sGGi~~~~~~~~l~~a~~ 216 (236)
T PF01791_consen 150 RAARIAAELGAD----FVKTST--GKP--VGATPEDVEL-----MRKAVEAAPVPGKVGVKASGGIDAEDFLRTLEDALE 216 (236)
T ss_dssp HHHHHHHHTT-S----EEEEE---SSS--SCSHHHHHHH-----HHHHHHTHSSTTTSEEEEESSSSHHHHHHSHHHHHH
T ss_pred HHHHHHHHhCCC----EEEecC--Ccc--ccccHHHHHH-----HHHHHHhcCCCcceEEEEeCCCChHHHHHHHHHHHH
Confidence 334444556664 477773 322 2345566553 222222 12332 1 577899754443333333221
Q ss_pred c--CCCCCCeeEEeehhhhc
Q 018326 284 L--KTKKPWSLSFSFGRALQ 301 (358)
Q Consensus 284 ~--~~~~PW~lsFSfgRALq 301 (358)
+ .+.. ...+|+||.+-
T Consensus 217 ~i~aGa~--~~G~~~Gr~i~ 234 (236)
T PF01791_consen 217 FIEAGAD--RIGTSSGRNIW 234 (236)
T ss_dssp HHHTTHS--EEEEEEHHHHH
T ss_pred HHHcCCh--hHHHHHHHHHH
Confidence 0 1100 38899999863
No 21
>TIGR03821 AblA_like_1 lysine-2,3-aminomutase-related protein. Members of this protein form a distinctive clade, homologous to lysine-2,3-aminomutase (of Bacillus, Clostridium, and methanogenic archaea) and likely similar in function. Members of this family are found in E. coli, Buchnera, Yersinia, etc.
Probab=43.39 E-value=58 Score=32.39 Aligned_cols=20 Identities=30% Similarity=0.409 Sum_probs=8.9
Q ss_pred HHHHHHHHHHHHHhCCccee
Q 018326 162 NANGLARYAIICQENGLVPI 181 (358)
Q Consensus 162 na~~LAryA~icQ~~GLVPI 181 (358)
|++.|.+......+.|+.|.
T Consensus 249 n~~~l~~L~~~l~~~gv~py 268 (321)
T TIGR03821 249 NADTLAALSERLFDAGVLPY 268 (321)
T ss_pred CHHHHHHHHHHHHHcCCeeC
Confidence 44444444444444444444
No 22
>PF08742 C8: C8 domain; InterPro: IPR014853 The proteins in this entry contained a domain rich in positionally conserved cysteine residues. Most proteins contains 7 or 8 cysteine residues. The domain is found in disease-related proteins including von Willebrand factor, Alpha tectorin, Zonadhesin and Mucin. It is often found on proteins containing IPR001846 from INTERPRO and IPR002919 from INTERPRO.
Probab=43.17 E-value=20 Score=27.56 Aligned_cols=21 Identities=29% Similarity=0.447 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHHhCCcce
Q 018326 160 NENANGLARYAIICQENGLVP 180 (358)
Q Consensus 160 ~~na~~LAryA~icQ~~GLVP 180 (358)
......|..||+.|+..|+++
T Consensus 44 ~~~C~~l~~Ya~~C~~~g~~~ 64 (74)
T PF08742_consen 44 QCLCEALSAYARECQRAGICV 64 (74)
T ss_pred chhhHHHHHHHHHHHHCcCCC
Confidence 456789999999999999864
No 23
>cd00635 PLPDE_III_YBL036c_like Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, YBL036c-like proteins. This family contains mostly uncharacterized proteins, widely distributed among eukaryotes, bacteria and archaea, that bear similarity to the yeast hypothetical protein YBL036c, which is homologous to a Pseudomonas aeruginosa gene that is co-transcribed with a known proline biosynthetic gene. YBL036c is a single domain monomeric protein with a typical TIM barrel fold. It binds the PLP cofactor and has been shown to exhibit amino acid racemase activity. The YBL036c structure is similar to the N-terminal domain of the fold type III PLP-dependent enzymes, bacterial alanine racemase and eukaryotic ornithine decarboxylase, which are two-domain dimeric proteins. The lack of a second domain in YBL036c may explain limited D- to L-alanine racemase or non-specific racemase activity.
Probab=42.81 E-value=1.9e+02 Score=26.62 Aligned_cols=87 Identities=15% Similarity=0.157 Sum_probs=54.6
Q ss_pred CcceeecCCccccccCCCCCcccCChhhHHHHHHHHhHcCCcceeeeeeeecCCCCchHHHHHHHHHHHHHHHHHHHhCC
Q 018326 98 VLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENG 177 (358)
Q Consensus 98 IvpGIKvDkGl~~l~~~~ge~~t~GLD~L~~R~~~y~~~Ga~FaKWRsVi~i~~~~Ps~~aI~~na~~LAryA~icQ~~G 177 (358)
+-..||||+|..+ +.-|..+ +-+..+.+++..+ ..-+.+-+........+.....++.+.+..++..+++.|
T Consensus 117 ~~v~lkvdtG~~~--~R~G~~~-~~~~~~~~~i~~~-----~~l~~~Gi~sh~s~~~~~~~~~~~~~~~~~~~~~l~~~~ 188 (222)
T cd00635 117 LDVLVQVNIGGEE--SKSGVAP-EELEELLEEIAAL-----PNLRIRGLMTIAPLTEDPEEVRPYFRELRELRDELGAKG 188 (222)
T ss_pred CcEEEEEecCCCC--CCCCCCH-HHHHHHHHHHHcC-----CCCcEEEEEEECCCCCChHHHHHHHHHHHHHHHHHHHhc
Confidence 4458999999643 2335543 2244555555432 223445555554444555668999999999999999886
Q ss_pred -cceeecceecCCCCCChh
Q 018326 178 -LVPIVEPEILVDGPHDIN 195 (358)
Q Consensus 178 -LVPIVEPEVl~dgdh~ie 195 (358)
+-+ ++|.+-|..+.+
T Consensus 189 g~~~---~~is~G~t~~~~ 204 (222)
T cd00635 189 GVNL---KELSMGMSGDFE 204 (222)
T ss_pred CCCC---CEEECcccHhHH
Confidence 522 677887776643
No 24
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=36.90 E-value=85 Score=26.07 Aligned_cols=84 Identities=13% Similarity=0.165 Sum_probs=54.1
Q ss_pred hhhHHHHHHHHHHhcCCCCceEeecCCCCChHHHhhhCCCCCccch------HhhhhhhhcccCCcC-CceeEEeecccc
Q 018326 6 GKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESN------RRALRELLFCTPGAL-QYLSGVILFEET 78 (358)
Q Consensus 6 ~~~~~eL~~ta~~~~a~gKGiLAaDES~gt~~Krl~~~Gvente~n------rr~yR~~l~ttp~~~-~~IsGvILfeET 78 (358)
...++++...|+++...|-.|+| ++.+.+.|+..||+.+.-+ +....++| .+ ..|.-||-+...
T Consensus 8 d~~K~~~~~~a~~l~~~G~~i~A----T~gTa~~L~~~Gi~~~~v~~~~~~g~~~i~~~i-----~~~g~idlVIn~~~~ 78 (112)
T cd00532 8 DHVKAMLVDLAPKLSSDGFPLFA----TGGTSRVLADAGIPVRAVSKRHEDGEPTVDAAI-----AEKGKFDVVINLRDP 78 (112)
T ss_pred cccHHHHHHHHHHHHHCCCEEEE----CcHHHHHHHHcCCceEEEEecCCCCCcHHHHHH-----hCCCCEEEEEEcCCC
Confidence 34688999999999999999998 5679999999999865421 12233333 23 577778877654
Q ss_pred ccc--cccCCccchHHHhhCCC
Q 018326 79 LYQ--KTAAGKPFVDVLKEGGV 98 (358)
Q Consensus 79 l~q--~~~~G~~~~~~L~~~GI 98 (358)
..+ ...||..+-..--+.||
T Consensus 79 ~~~~~~~~dg~~iRR~A~~~~I 100 (112)
T cd00532 79 RRDRCTDEDGTALLRLARLYKI 100 (112)
T ss_pred CcccccCCChHHHHHHHHHcCC
Confidence 431 13445444333334444
No 25
>smart00832 C8 C8 domain. This domain contains 8 conserved cysteine residues, but this family only contains 7 of them to overlaps with other domains. It is found in disease-related proteins including von Willebrand factor, Alpha tectorin, Zonadhesin and Mucin.
Probab=36.60 E-value=28 Score=27.62 Aligned_cols=19 Identities=37% Similarity=0.607 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHHhCCcc
Q 018326 161 ENANGLARYAIICQENGLV 179 (358)
Q Consensus 161 ~na~~LAryA~icQ~~GLV 179 (358)
.-...|+.||+.|++.|+.
T Consensus 47 ~lC~al~aYa~aC~~~Gv~ 65 (76)
T smart00832 47 CLCDALAAYAAACAEAGVC 65 (76)
T ss_pred ccCHHHHHHHHHHHHCcCc
Confidence 3468999999999999964
No 26
>cd07941 DRE_TIM_LeuA3 Desulfobacterium autotrophicum LeuA3 and related proteins, N-terminal catalytic TIM barrel domain. Desulfobacterium autotrophicum LeuA3 is sequence-similar to alpha-isopropylmalate synthase (LeuA) but its exact function is unknown. Members of this family have an N-terminal TIM barrel domain that belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of in
Probab=29.84 E-value=4.7e+02 Score=25.20 Aligned_cols=78 Identities=21% Similarity=0.236 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHhCCcceeecceecCCC-CCChhhHHHHHHHHHHHHHHHhhcCCceeeccccccCCCCCCCCC-CCC
Q 018326 161 ENANGLARYAIICQENGLVPIVEPEILVDG-PHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEA-PKV 238 (358)
Q Consensus 161 ~na~~LAryA~icQ~~GLVPIVEPEVl~dg-dh~ie~~~~vt~~vl~~v~~~L~~~~V~Leg~lLKpnmv~pG~~~-~~~ 238 (358)
++.+.+.+..+.+.+.|+-..+-+|.++|+ .|+.+...++. +.+.+.|+.- -.| .|. ...
T Consensus 116 ~~~~~~~~~i~~ak~~G~~v~~~~~~~~d~~~~~~~~~~~~~--------~~~~~~g~~~-i~l---------~DT~G~~ 177 (273)
T cd07941 116 ENLAMIRDSVAYLKSHGREVIFDAEHFFDGYKANPEYALATL--------KAAAEAGADW-LVL---------CDTNGGT 177 (273)
T ss_pred HHHHHHHHHHHHHHHcCCeEEEeEEeccccCCCCHHHHHHHH--------HHHHhCCCCE-EEE---------ecCCCCC
Confidence 334444555555568998777778888786 67765544443 3334334321 111 333 456
Q ss_pred CHHHHHHHHHHHhhccCCC
Q 018326 239 TPDVIAEHTVRALQRTMPA 257 (358)
Q Consensus 239 ~~~evA~~Tv~~l~r~vP~ 257 (358)
+|++|.. -++.|++.+|.
T Consensus 178 ~P~~v~~-lv~~l~~~~~~ 195 (273)
T cd07941 178 LPHEIAE-IVKEVRERLPG 195 (273)
T ss_pred CHHHHHH-HHHHHHHhCCC
Confidence 8999875 56777777764
No 27
>PRK06105 aminotransferase; Provisional
Probab=28.94 E-value=5.7e+02 Score=26.54 Aligned_cols=61 Identities=21% Similarity=0.275 Sum_probs=39.0
Q ss_pred cchhhHHHHHHHHHHhcCCCCceEeecCCC---CChHHH--hhhCCCCCccchHhhhhhhhcccCCcCC-c--eeEEeec
Q 018326 4 FKGKYADELIKNAAYIGTPGKGILAADEST---GTIGKR--LSSINVENVESNRRALRELLFCTPGALQ-Y--LSGVILF 75 (358)
Q Consensus 4 ~~~~~~~eL~~ta~~~~a~gKGiLAaDES~---gt~~Kr--l~~~Gvente~nrr~yR~~l~ttp~~~~-~--IsGvILf 75 (358)
.+.+|-++|++++++- .-+|.+||-- |.+++- ++.+||+.+ ++..+++++. + +++++.-
T Consensus 236 ~~~~yl~~lr~lc~~~----~~llI~DEv~tG~GRtG~~f~~~~~~v~PD---------i~~~gK~lggG~~P~~av~~~ 302 (460)
T PRK06105 236 PPKTYWEKIQAVLRKY----DILLVADEVICGFGRTGNMFGCETFGIKPD---------ILVMSKQLSSSYQPLSAVLMN 302 (460)
T ss_pred CCHHHHHHHHHHHHHc----CCeEEEeccccCCCcCchhhhHHhcCCCCC---------eeeeecccccCcccceEEEEc
Confidence 3567777887777653 4567779974 245554 456788765 5555688884 3 6666655
Q ss_pred cc
Q 018326 76 EE 77 (358)
Q Consensus 76 eE 77 (358)
+|
T Consensus 303 ~~ 304 (460)
T PRK06105 303 EK 304 (460)
T ss_pred HH
Confidence 44
No 28
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=28.31 E-value=1.3e+02 Score=30.01 Aligned_cols=85 Identities=29% Similarity=0.395 Sum_probs=53.0
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhccCCCCCceEEecCCC------CCHHHHHHHHHHhcccCCCCC--CeeEEe------
Q 018326 230 TPGSEAPKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGG------QSEEEATRNLNAMNQLKTKKP--WSLSFS------ 295 (358)
Q Consensus 230 ~pG~~~~~~~~~evA~~Tv~~l~r~vP~aVpgVvFLSGG------~s~eeAt~~LnaiN~~~~~~P--W~lsFS------ 295 (358)
++|.-+ ..+++.++.+--....+--+-.=|.|.+|-|| ++++++..-+..++++....+ |-||+|
T Consensus 118 t~ga~~-~i~~~~l~~a~~~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~~~~~vttSRRTp~~ 196 (311)
T PF06258_consen 118 TLGAPN-RITPERLAEAAAAWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYGGSLLVTTSRRTPPE 196 (311)
T ss_pred cccCCC-cCCHHHHHHHHHhhhhhhccCCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCCCeEEEEcCCCCcHH
Confidence 344444 56788887755444444334456789999998 567878888888887654445 555555
Q ss_pred ehhhhcHHH-----HHHhcCCcccH
Q 018326 296 FGRALQQST-----LKAWAGKEENV 315 (358)
Q Consensus 296 fgRALq~~~-----l~~W~G~~~nv 315 (358)
...+|.+-+ +..|.+..+|-
T Consensus 197 ~~~~L~~~~~~~~~~~~~~~~~~nP 221 (311)
T PF06258_consen 197 AEAALRELLKDNPGVYIWDGTGENP 221 (311)
T ss_pred HHHHHHHhhcCCCceEEecCCCCCc
Confidence 233444444 34577777774
No 29
>TIGR00676 fadh2 5,10-methylenetetrahydrofolate reductase, prokaryotic form. This protein is an FAD-containing flavoprotein.
Probab=27.77 E-value=5.6e+02 Score=24.70 Aligned_cols=160 Identities=14% Similarity=0.200 Sum_probs=89.9
Q ss_pred hHHHHHHHHHHhcCCCCceE-eecCCCCC-------hHHHhh-hCCCCCcc------chHhhhhhhhcccCCcC-Ccee-
Q 018326 8 YADELIKNAAYIGTPGKGIL-AADESTGT-------IGKRLS-SINVENVE------SNRRALRELLFCTPGAL-QYLS- 70 (358)
Q Consensus 8 ~~~eL~~ta~~~~a~gKGiL-AaDES~gt-------~~Krl~-~~Gvente------~nrr~yR~~l~ttp~~~-~~Is- 70 (358)
..+.|.++++.|-.-+--++ .+|-++++ +.+++. .+|++.-. .||.+.++.|...-.++ +.|.
T Consensus 13 ~~~~l~~~~~~l~~~~pd~isvT~~~~~~~~~~t~~~a~~l~~~~g~~~i~Hlt~r~~n~~~l~~~L~~~~~~Gi~nvL~ 92 (272)
T TIGR00676 13 GEENLWETVDRLSPLDPDFVSVTYGAGGSTRDRTVRIVRRIKKETGIPTVPHLTCIGATREEIREILREYRELGIRHILA 92 (272)
T ss_pred hHHHHHHHHHHHhcCCCCEEEeccCCCCCcHHHHHHHHHHHHHhcCCCeeEEeeecCCCHHHHHHHHHHHHHCCCCEEEE
Confidence 34788889999877654444 44866654 467777 56888543 36666666665543333 2221
Q ss_pred --EEee--ccccccccccCCccchHHHhhC-CCcceeecCCccccccCCCCCcccCChhhHHHHHHHHhHcCCcceeeee
Q 018326 71 --GVIL--FEETLYQKTAAGKPFVDVLKEG-GVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRA 145 (358)
Q Consensus 71 --GvIL--feETl~q~~~~G~~~~~~L~~~-GIvpGIKvDkGl~~l~~~~ge~~t~GLD~L~~R~~~y~~~Ga~FaKWRs 145 (358)
|=-- .++.-...-.+...+.+++++. + .+.+--...| + |..-.+..+...+|+++..+.||.|.-=..
T Consensus 93 l~GD~~~~~~~~~~~~f~~a~~Li~~i~~~~~---~f~ig~a~~P--e--ghp~~~~~~~~~~~L~~K~~aGA~f~iTQ~ 165 (272)
T TIGR00676 93 LRGDPPKGEGTPTPGGFNYASELVEFIRNEFG---DFDIGVAAYP--E--KHPEAPNLEEDIENLKRKVDAGADYAITQL 165 (272)
T ss_pred eCCCCCCCCCCCCCCCCCCHHHHHHHHHHhcC---CeeEEEEeCC--C--CCCCCCCHHHHHHHHHHHHHcCCCeEeecc
Confidence 1100 1101111112334455666543 3 3333333344 2 223345577888999999999987633222
Q ss_pred eeecCCCCchHHHHHHHHHHHHHHHHHHHhCCcceeecceecC
Q 018326 146 VLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILV 188 (358)
Q Consensus 146 Vi~i~~~~Ps~~aI~~na~~LAryA~icQ~~GLVPIVEPEVl~ 188 (358)
++ +++.+.+|-..|++.|+-.=|-|-|..
T Consensus 166 ~f--------------d~~~~~~~~~~~~~~gi~~PIi~Gi~p 194 (272)
T TIGR00676 166 FF--------------DNDDYYRFVDRCRAAGIDVPIIPGIMP 194 (272)
T ss_pred cc--------------CHHHHHHHHHHHHHcCCCCCEecccCC
Confidence 22 235677888899999865445577765
No 30
>TIGR03822 AblA_like_2 lysine-2,3-aminomutase-related protein. Members of this protein form a distinctive clade, homologous to lysine-2,3-aminomutase (of Bacillus, Clostridium, and methanogenic archaea) and likely similar in function. Members of this family are found in Rhodopseudomonas, Caulobacter crescentus, Bradyrhizobium, etc.
Probab=26.69 E-value=4.1e+02 Score=26.32 Aligned_cols=94 Identities=15% Similarity=0.205 Sum_probs=53.1
Q ss_pred HhCCcceeecceecCCCCCChhhHHHHHHHHHHHHHHHhhcCCceeeccccccCCCCCCCCCCCCCHHHHHHHHHHHhhc
Q 018326 174 QENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAPKVTPDVIAEHTVRALQR 253 (358)
Q Consensus 174 Q~~GLVPIVEPEVl~dgdh~ie~~~~vt~~vl~~v~~~L~~~~V~Leg~lLKpnmv~pG~~~~~~~~~evA~~Tv~~l~r 253 (358)
.+.| ++++ |-+|++|. .++++.++. -++.|.+.||.+... +.++.|... +.+++....-.+++.
T Consensus 194 ~~~g-~~v~---i~l~~~h~----~el~~~~~~-ai~~L~~~Gi~v~~q----~vLl~gvNd---~~~~l~~l~~~l~~~ 257 (321)
T TIGR03822 194 KTSG-KTVY---VALHANHA----RELTAEARA-ACARLIDAGIPMVSQ----SVLLRGVND---DPETLAALMRAFVEC 257 (321)
T ss_pred HHcC-CcEE---EEecCCCh----hhcCHHHHH-HHHHHHHcCCEEEEE----eeEeCCCCC---CHHHHHHHHHHHHhc
Confidence 3567 5654 78899987 445666665 467788888755431 123345433 455555544444444
Q ss_pred cCCCCCceEEecCCC-----CCHHHHHHHHHHhcc
Q 018326 254 TMPAAVPAVVFLSGG-----QSEEEATRNLNAMNQ 283 (358)
Q Consensus 254 ~vP~aVpgVvFLSGG-----~s~eeAt~~LnaiN~ 283 (358)
-|.|-..-..-..+| .+.+++...+.++..
T Consensus 258 gv~pyyl~~~~p~~g~~~f~~~~~~~~~i~~~l~~ 292 (321)
T TIGR03822 258 RIKPYYLHHLDLAPGTAHFRVTIEEGQALVRALRG 292 (321)
T ss_pred CCeeEEEEecCCCCCcccccCcHHHHHHHHHHHHH
Confidence 554444344444444 456677766666543
No 31
>cd00537 MTHFR Methylenetetrahydrofolate reductase (MTHFR). 5,10-Methylenetetrahydrofolate is reduced to 5-methyltetrahydrofolate by methylenetetrahydrofolate reductase, a cytoplasmic, NAD(P)-dependent enzyme. 5-methyltetrahydrofolate is utilized by methionine synthase to convert homocysteine to methionine. The enzymatic mechanism is a ping-pong bi-bi mechanism, in which NAD(P)+ release precedes the binding of methylenetetrahydrofolate and the acceptor is free FAD. The family includes the 5,10-methylenetetrahydrofolate reductase EC:1.7.99.5 from prokaryotes and methylenetetrahydrofolate reductase EC: 1.5.1.20 from eukaryotes. The bacterial enzyme is a homotetramer and NADH is the preferred reductant while the eukaryotic enzyme is a homodimer and NADPH is the preferred reductant. In humans, there are several clinically significant mutations in MTHFR that result in hyperhomocysteinemia, which is a risk factor for the development of cardiovascular disease.
Probab=26.68 E-value=5.6e+02 Score=24.37 Aligned_cols=227 Identities=17% Similarity=0.257 Sum_probs=118.5
Q ss_pred chhhHHHHHHHHHHhcCC-CCceEeecCCCCC-------hHHHhhh-CCCCCcc------chHhhhhhhhcccCCcCCce
Q 018326 5 KGKYADELIKNAAYIGTP-GKGILAADESTGT-------IGKRLSS-INVENVE------SNRRALRELLFCTPGALQYL 69 (358)
Q Consensus 5 ~~~~~~eL~~ta~~~~a~-gKGiLAaDES~gt-------~~Krl~~-~Gvente------~nrr~yR~~l~ttp~~~~~I 69 (358)
..+..+.|..+...+-.- ...|...|-..|+ +.+++.. .|++.-. .|+.+.++.|...-.++ |
T Consensus 10 ~~~~~~~l~~~~~~~~~~~~d~v~Vt~~~~g~~~~~t~~~a~~l~~~~g~~~i~Hlt~r~~n~~~l~~~L~~~~~~G--i 87 (274)
T cd00537 10 TADGEENLEAAADLLGALDPDFVSVTDGAGGSTRDMTLLAAARILQEGGIEPIPHLTCRDRNRIELQSILLGAHALG--I 87 (274)
T ss_pred CccHHHHHHHHHHHhhcCCCCEEEeCCCCCCchhhhHHHHHHHHHHhcCCCeeeecccCCCCHHHHHHHHHHHHHCC--C
Confidence 334445666666544332 5566666765543 3455544 4577544 36777777776654444 3
Q ss_pred eEEeec-------cc---cccccccCCccchHHHhhCCCcceeecCCccccccCCCCCcccCChhhHHHHHHHHhHcCCc
Q 018326 70 SGVILF-------EE---TLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGAR 139 (358)
Q Consensus 70 sGvILf-------eE---Tl~q~~~~G~~~~~~L~~~GIvpGIKvDkGl~~l~~~~ge~~t~GLD~L~~R~~~y~~~Ga~ 139 (358)
..+.+- .+ +-.....+...+.+++++.+ -+++++.....| + +..-...++...+|+++..+.||.
T Consensus 88 ~~iL~l~GD~~~~~~~~~~~~~~~~~a~~Li~~i~~~~-~~~~~igva~yP--e--~hp~~~~~~~~~~~L~~Ki~aGA~ 162 (274)
T cd00537 88 RNILALRGDPPKGGDQPGAKPVGFVYAVDLVELIRKEN-GGGFSIGVAAYP--E--GHPEAPSLEEDIKRLKRKVDAGAD 162 (274)
T ss_pred CeEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHhc-CCCCccccccCC--C--cCCCCCCHHHHHHHHHHHHHCCCC
Confidence 332222 11 11112234445556666542 133444444444 1 222334588899999999999987
Q ss_pred ceeeeeeeecCCCCchHHHHHHHHHHHHHHHHHHHhCCc-ceeecceecCCCCCChhhHHHHHHHHHHHHHHHhhcCCce
Q 018326 140 FAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGL-VPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVL 218 (358)
Q Consensus 140 FaKWRsVi~i~~~~Ps~~aI~~na~~LAryA~icQ~~GL-VPIVEPEVl~dgdh~ie~~~~vt~~vl~~v~~~L~~~~V~ 218 (358)
|.-=..++. ++...+|-..|++.|+ |||+ |-|..= .+........+ + .||.
T Consensus 163 f~iTQ~~fd--------------~~~~~~~~~~~~~~gi~vPIi-~GI~p~--~s~~~l~~~~~---------~--~Gv~ 214 (274)
T cd00537 163 FIITQLFFD--------------NDAFLRFVDRCRAAGITVPII-PGIMPL--TSYKQAKRFAK---------L--CGVE 214 (274)
T ss_pred EEeeccccc--------------HHHHHHHHHHHHHcCCCCCEE-eecccc--CCHHHHHHHHH---------h--hCCC
Confidence 754443332 3567788888999984 5655 666552 23222222211 1 1554
Q ss_pred eeccccccCCCCCCCCC--CCCCHHHHHHHHHHHhhccCCCCCceEEecCCCCC
Q 018326 219 LEGTLLKPNMVTPGSEA--PKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQS 270 (358)
Q Consensus 219 Leg~lLKpnmv~pG~~~--~~~~~~evA~~Tv~~l~r~vP~aVpgVvFLSGG~s 270 (358)
+.--+++=-- ..+.+. .+....+++..-++.|+. ..++||-|.+=+..
T Consensus 215 vP~~~~~~l~-~~~~~~~~~~~~g~~~~~~l~~~l~~---~~~~giH~~t~n~~ 264 (274)
T cd00537 215 IPDWLLERLE-KLKDDAEAVRAEGIEIAAELCDELLE---HGVPGIHFYTLNRE 264 (274)
T ss_pred CCHHHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHHH---cCCCEEEEcCCCCh
Confidence 4443322100 000110 122344455555555554 58999999998877
No 32
>PF06508 QueC: Queuosine biosynthesis protein QueC; InterPro: IPR018317 This protein family is represented by a single member in nearly every completed large (> 1000 genes) prokaryotic genome. In Rhizobium meliloti (Sinorhizobium meliloti), a species in which the exo genes make succinoglycan, a symbiotically important exopolysaccharide, exsB is located nearby and affects succinoglycan levels, probably through polar effects on exsA expression or the same polycistronic mRNA [, ]. In Arthrobacter viscosus, the homologous gene is designated alu1 and is associated with an aluminum tolerance phenotype. When expressed in Escherichia coli, it conferred aliminium tolerance []. The entry also contains the gene queC, which is responsible for the conversion of GTP to 7-cyano-7-deazaguanine (preQ0). The biosynthesis of hypermodified tRNA nucleoside queuosine only occurs in eubacteria. It occupies the wobble position for all known tRNAs that are specific for Asp, Asn, His or Tyr [].; PDB: 3BL5_B 2PG3_A.
Probab=26.49 E-value=38 Score=31.69 Aligned_cols=34 Identities=24% Similarity=0.428 Sum_probs=19.8
Q ss_pred EEecCCCCCHHHHHHHHHHhcccCCCCCCeeEEeehhh
Q 018326 262 VVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRA 299 (358)
Q Consensus 262 VvFLSGG~s~eeAt~~LnaiN~~~~~~PW~lsFSfgRA 299 (358)
||.+|||..---+...+.. +. ...+.|+|.||.-
T Consensus 3 vvl~SGG~DSt~~l~~~~~--~~--~~v~al~~~YGq~ 36 (209)
T PF06508_consen 3 VVLFSGGLDSTTCLYWAKK--EG--YEVYALTFDYGQR 36 (209)
T ss_dssp EEE--SSHHHHHHHHHHHH--H---SEEEEEEEESSST
T ss_pred EEEeCCCHHHHHHHHHHHH--cC--CeEEEEEEECCCC
Confidence 7899999864444433333 21 2357899999964
No 33
>PRK14454 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=26.20 E-value=94 Score=31.37 Aligned_cols=61 Identities=13% Similarity=0.273 Sum_probs=36.1
Q ss_pred ccccccCCCCCCCCC--CCCCHHHHHHHHHHHhhccCCCCCceEEecCCCCCHH---HHHHHHHHhc
Q 018326 221 GTLLKPNMVTPGSEA--PKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEE---EATRNLNAMN 282 (358)
Q Consensus 221 g~lLKpnmv~pG~~~--~~~~~~evA~~Tv~~l~r~vP~aVpgVvFLSGG~s~e---eAt~~LnaiN 282 (358)
|+=+...+-.-|... ...|++||..--+ ..++-....+-||||+|||=+.. ....-|..++
T Consensus 110 GC~~~C~FC~tg~~G~~rnlt~~EI~~qv~-~~~~~~~~~~~gvV~mggGEPLln~d~v~~~l~~l~ 175 (342)
T PRK14454 110 GCRMGCKFCASTIGGMVRNLTAGEMLDQIL-AAQNDIGERISNIVLMGSGEPLDNYENVMKFLKIVN 175 (342)
T ss_pred CCCCcCCcCCCCCCCCcccCCHHHHHHHHH-HHHHHhcCCCCCEEEECCchhhcCHHHHHHHHHHHh
Confidence 444555555555554 3579999986433 33333334688999999996543 3334444444
No 34
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=26.04 E-value=4.9e+02 Score=25.43 Aligned_cols=200 Identities=13% Similarity=0.113 Sum_probs=105.6
Q ss_pred hhHHHHHHHHHHhcCCCCceEee-cCCCCChHHHhhhCCCCCccchHhhhhhh---hcccCCcC----CceeEEeecccc
Q 018326 7 KYADELIKNAAYIGTPGKGILAA-DESTGTIGKRLSSINVENVESNRRALREL---LFCTPGAL----QYLSGVILFEET 78 (358)
Q Consensus 7 ~~~~eL~~ta~~~~a~gKGiLAa-DES~gt~~Krl~~~Gvente~nrr~yR~~---l~ttp~~~----~~IsGvILfeET 78 (358)
|..+.+.++|++|.+-|.-++-. .+-+-|.+.-|+..|.+.-.+-|...++. ++|++ ++ +++.-++ -
T Consensus 38 e~~~~~~~~A~~lk~~g~~~~r~~~~kpRTs~~s~~G~g~~gl~~l~~~~~~~Gl~~~te~-~d~~~~~~l~~~v----d 112 (266)
T PRK13398 38 ESEEQMVKVAEKLKELGVHMLRGGAFKPRTSPYSFQGLGEEGLKILKEVGDKYNLPVVTEV-MDTRDVEEVADYA----D 112 (266)
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeeecCCCCCCccCCcHHHHHHHHHHHHHHcCCCEEEee-CChhhHHHHHHhC----C
Confidence 45667889999999988887766 67688888888877632222223222222 23332 11 2222210 1
Q ss_pred ccc---cccCCccchHHHhhCCCcceeecCCccccccCCCCCcccCChhhHHHHHHHHhHcCCcceeeeeeeecC----C
Q 018326 79 LYQ---KTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIG----P 151 (358)
Q Consensus 79 l~q---~~~~G~~~~~~L~~~GIvpGIKvDkGl~~l~~~~ge~~t~GLD~L~~R~~~y~~~Ga~FaKWRsVi~i~----~ 151 (358)
+.| ++..-.++-+.+.+.|...++|-.... .+++...-+......|- +-=.++.-+ .
T Consensus 113 ~~kIga~~~~n~~LL~~~a~~gkPV~lk~G~~~-------------s~~e~~~A~e~i~~~Gn---~~i~L~~rG~~t~~ 176 (266)
T PRK13398 113 MLQIGSRNMQNFELLKEVGKTKKPILLKRGMSA-------------TLEEWLYAAEYIMSEGN---ENVVLCERGIRTFE 176 (266)
T ss_pred EEEECcccccCHHHHHHHhcCCCcEEEeCCCCC-------------CHHHHHHHHHHHHhcCC---CeEEEEECCCCCCC
Confidence 222 122334566666677777777754332 23444444444444563 211222221 1
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHhCCcceeecceecCCCCCChhhHHHHHHHHHHHHHHHhhcCCceeeccc-cccCCCC
Q 018326 152 NEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTL-LKPNMVT 230 (358)
Q Consensus 152 ~~Ps~~aI~~na~~LAryA~icQ~~GLVPIVEPEVl~dgdh~ie~~~~vt~~vl~~v~~~L~~~~V~Leg~l-LKpnmv~ 230 (358)
+.| ...++-++-.+.+ +..+ +| |.+|.+|+.-....|....++++ ++-..|+++|--+ +.-++
T Consensus 177 ~Y~-~~~vdl~~i~~lk-----~~~~-~p-----V~~D~sHs~G~~~~v~~~~~aAv--a~Ga~Gl~iE~H~~pd~a~-- 240 (266)
T PRK13398 177 TYT-RNTLDLAAVAVIK-----ELSH-LP-----IIVDPSHATGRRELVIPMAKAAI--AAGADGLMIEVHPEPEKAL-- 240 (266)
T ss_pred CCC-HHHHHHHHHHHHH-----hccC-CC-----EEEeCCCcccchhhHHHHHHHHH--HcCCCEEEEeccCCccccC--
Confidence 234 2222222222222 2335 45 66788899876666666555554 4556678888554 33343
Q ss_pred CCCCC-CCCCHHHHHH
Q 018326 231 PGSEA-PKVTPDVIAE 245 (358)
Q Consensus 231 pG~~~-~~~~~~evA~ 245 (358)
.|+ ...+|++...
T Consensus 241 --~D~~~sl~p~~l~~ 254 (266)
T PRK13398 241 --SDARQTLNFEEMKE 254 (266)
T ss_pred --CchhhcCCHHHHHH
Confidence 366 6677888764
No 35
>PF10058 DUF2296: Predicted integral membrane metal-binding protein (DUF2296); InterPro: IPR019273 This domain, found mainly in the eukaryotic lunapark proteins, has no known function [].
Probab=26.02 E-value=8.5 Score=29.14 Aligned_cols=20 Identities=55% Similarity=0.936 Sum_probs=15.9
Q ss_pred HHHHHHHh----CCcceeecceec
Q 018326 168 RYAIICQE----NGLVPIVEPEIL 187 (358)
Q Consensus 168 ryA~icQ~----~GLVPIVEPEVl 187 (358)
|||.||+. +|++|..|++-+
T Consensus 20 r~aLIC~~C~~hNGla~~~~~~~i 43 (54)
T PF10058_consen 20 RYALICSKCFSHNGLAPKEEFEEI 43 (54)
T ss_pred ceeEECcccchhhcccccccCCce
Confidence 78999976 899997777643
No 36
>COG0603 Predicted PP-loop superfamily ATPase [General function prediction only]
Probab=25.41 E-value=64 Score=31.16 Aligned_cols=34 Identities=29% Similarity=0.440 Sum_probs=21.8
Q ss_pred eEEecCCCCCHHHHHHHHHHhcccCCCCCCeeEEeehh
Q 018326 261 AVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGR 298 (358)
Q Consensus 261 gVvFLSGG~s~eeAt~~LnaiN~~~~~~PW~lsFSfgR 298 (358)
.||.||||+.-.-...-+.+ .. ..=..|||-||.
T Consensus 5 avvl~SGG~DStt~l~~a~~--~~--~ev~alsfdYGQ 38 (222)
T COG0603 5 AVVLLSGGLDSTTCLAWAKK--EG--YEVHALTFDYGQ 38 (222)
T ss_pred EEEEccCChhHHHHHHHHHh--cC--CEEEEEEeeCCC
Confidence 58999999975444444433 21 122489999993
No 37
>COG0703 AroK Shikimate kinase [Amino acid transport and metabolism]
Probab=25.31 E-value=1.9e+02 Score=26.89 Aligned_cols=116 Identities=22% Similarity=0.214 Sum_probs=66.4
Q ss_pred CCCChHHHhhhCCCCCccchH----hhhhhhhcccCCcCCceeEEeeccccccccccCCccchHHHhhCCCcceeecCCc
Q 018326 32 STGTIGKRLSSINVENVESNR----RALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKG 107 (358)
Q Consensus 32 S~gt~~Krl~~~Gvente~nr----r~yR~~l~ttp~~~~~IsGvILfeETl~q~~~~G~~~~~~L~~~GIvpGIKvDkG 107 (358)
.+-|++.=|+..| .++=| +..++++...+..=..=+|+++.||+.. +|+++|++..++.|--
T Consensus 41 ~g~sI~eIF~~~G---E~~FR~~E~~vl~~l~~~~~~ViaTGGG~v~~~enr~-----------~l~~~g~vv~L~~~~e 106 (172)
T COG0703 41 TGMSIAEIFEEEG---EEGFRRLETEVLKELLEEDNAVIATGGGAVLSEENRN-----------LLKKRGIVVYLDAPFE 106 (172)
T ss_pred HCcCHHHHHHHHh---HHHHHHHHHHHHHHHhhcCCeEEECCCccccCHHHHH-----------HHHhCCeEEEEeCCHH
Confidence 5677888888776 33333 3334443332222233479999999876 8899999999997643
Q ss_pred c--ccc------cCCCCCcccCChhhHHH-HHHHHhHcCCcceeeeeeeecCCCCchHHHHHHHHHHHHHH
Q 018326 108 T--VEL------AGTNGETTTQGLDGLAQ-RCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARY 169 (358)
Q Consensus 108 l--~~l------~~~~ge~~t~GLD~L~~-R~~~y~~~Ga~FaKWRsVi~i~~~~Ps~~aI~~na~~LAry 169 (358)
. .-+ |-...+.+.+-|.+|.+ |-.-|. .- +.+.+..+.++.....+..+.|..+
T Consensus 107 ~l~~Rl~~~~~RPll~~~~~~~~l~~L~~~R~~~Y~-e~-------a~~~~~~~~~~~~v~~~i~~~l~~~ 169 (172)
T COG0703 107 TLYERLQRDRKRPLLQTEDPREELEELLEERQPLYR-EV-------ADFIIDTDDRSEEVVEEILEALEGS 169 (172)
T ss_pred HHHHHhccccCCCcccCCChHHHHHHHHHHHHHHHH-Hh-------CcEEecCCCCcHHHHHHHHHHHHHh
Confidence 2 111 11223334445777754 444454 43 5666665556655555555555443
No 38
>PRK13774 formimidoylglutamase; Provisional
Probab=24.49 E-value=2e+02 Score=28.43 Aligned_cols=86 Identities=22% Similarity=0.276 Sum_probs=48.8
Q ss_pred CcceeecCCccccccCCCCCcccCChhhHHHHHHHHhHcCCcceeee---eeeecCCCCchHHHHHHHHHHHHHHHHHHH
Q 018326 98 VLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWR---AVLKIGPNEPSQLAINENANGLARYAIICQ 174 (358)
Q Consensus 98 IvpGIKvDkGl~~l~~~~ge~~t~GLD~L~~R~~~y~~~Ga~FaKWR---sVi~i~~~~Ps~~aI~~na~~LAryA~icQ 174 (358)
.|.|+=.|.|+..-.+.+|.. .|=+.+++-. +++..++ .+...++-.+....+.+..+.+....+...
T Consensus 47 ~iiGvP~d~g~~~n~~r~G~~--~gP~aIR~as-------~~l~~~~~~~~i~D~Gdv~~~~~~~~~~~~~i~~~v~~i~ 117 (311)
T PRK13774 47 GILGYAVDKGVALNKGRIGAK--EGPDAIKQAF-------AGLPDLNQCETLVDYGNVYHDHEELIDTQKEFAMLAAKSI 117 (311)
T ss_pred EEEEecccccccCCCCCcCHh--HhHHHHHHHh-------hcCCcccccCeEEECCCCCCCccHHHHHHHHHHHHHHHHH
Confidence 366777777764311122322 2333343332 2233333 344444432233456777788888777788
Q ss_pred hCCcceeecceecCCCCCChhhH
Q 018326 175 ENGLVPIVEPEILVDGPHDINKC 197 (358)
Q Consensus 175 ~~GLVPIVEPEVl~dgdh~ie~~ 197 (358)
+.|.+||| +-|||++.-.
T Consensus 118 ~~g~~piv-----lGGdHsit~g 135 (311)
T PRK13774 118 ANHRQTFL-----LGGGHDIAYA 135 (311)
T ss_pred HCCCeEEE-----EcCchHHHHH
Confidence 89999964 8999997654
No 39
>COG0367 AsnB Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism]
Probab=23.94 E-value=1.6e+02 Score=31.59 Aligned_cols=45 Identities=24% Similarity=0.246 Sum_probs=33.1
Q ss_pred CHHHHHHHHHHHhhccCCCCCceEEecCCCCCHHHHHHHHHHhcc
Q 018326 239 TPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQ 283 (358)
Q Consensus 239 ~~~evA~~Tv~~l~r~vP~aVpgVvFLSGG~s~eeAt~~LnaiN~ 283 (358)
..+++...=..+.++.+-..||.-+|||||-.-.--...+...+.
T Consensus 211 ~~~~l~~~l~~sV~~r~~advpvg~~lSGGlDSS~Iaa~a~~~~~ 255 (542)
T COG0367 211 LAEHLRSLLEDAVKRRLVADVPVGVFLSGGLDSSLIAAIAAEELG 255 (542)
T ss_pred HHHHHHHHHHHHHHHHhccCCcEEEEeCCCccHHHHHHHHHHhcc
Confidence 355555555555666666789999999999997777777777654
No 40
>PF13578 Methyltransf_24: Methyltransferase domain; PDB: 3SSO_A 3SSN_C 3SSM_D.
Probab=23.90 E-value=31 Score=27.55 Aligned_cols=29 Identities=28% Similarity=0.406 Sum_probs=16.0
Q ss_pred ecCCCCCChhhHHHHHHHHHHHHHHHhhcCCce
Q 018326 186 ILVDGPHDINKCADVTERVLAACYKALNDHHVL 218 (358)
Q Consensus 186 Vl~dgdh~ie~~~~vt~~vl~~v~~~L~~~~V~ 218 (358)
|.+||+|+ .+.+..-+..++..|...+|.
T Consensus 73 i~iDg~H~----~~~~~~dl~~~~~~l~~ggvi 101 (106)
T PF13578_consen 73 IFIDGDHS----YEAVLRDLENALPRLAPGGVI 101 (106)
T ss_dssp EEEES-------HHHHHHHHHHHGGGEEEEEEE
T ss_pred EEECCCCC----HHHHHHHHHHHHHHcCCCeEE
Confidence 57899999 444545555566666665553
No 41
>PRK06552 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=23.78 E-value=2.6e+02 Score=26.32 Aligned_cols=53 Identities=21% Similarity=0.238 Sum_probs=33.9
Q ss_pred cee-eccccccCCCC----CCCCC--CCCCHHHHHHHHHHHhhccCCCCCceEEecCCCCCHHHHHHHHH
Q 018326 217 VLL-EGTLLKPNMVT----PGSEA--PKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLN 279 (358)
Q Consensus 217 V~L-eg~lLKpnmv~----pG~~~--~~~~~~evA~~Tv~~l~r~vP~aVpgVvFLSGG~s~eeAt~~Ln 279 (358)
+.+ -||++-+..+. .|.+. ......+|..+..+ .+|.++.|-.|.+|+..-++
T Consensus 68 ~~vGaGTV~~~~~~~~a~~aGA~FivsP~~~~~v~~~~~~----------~~i~~iPG~~T~~E~~~A~~ 127 (213)
T PRK06552 68 VLIGAGTVLDAVTARLAILAGAQFIVSPSFNRETAKICNL----------YQIPYLPGCMTVTEIVTALE 127 (213)
T ss_pred eEEeeeeCCCHHHHHHHHHcCCCEEECCCCCHHHHHHHHH----------cCCCEECCcCCHHHHHHHHH
Confidence 443 47888777654 55554 23344666665443 26678888899999877664
No 42
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=23.52 E-value=3.3e+02 Score=24.33 Aligned_cols=34 Identities=26% Similarity=0.325 Sum_probs=23.7
Q ss_pred CCCHHHHHHHHHHHhhccCCCCC-ceEEecCCCCCH
Q 018326 237 KVTPDVIAEHTVRALQRTMPAAV-PAVVFLSGGQSE 271 (358)
Q Consensus 237 ~~~~~evA~~Tv~~l~r~vP~aV-pgVvFLSGG~s~ 271 (358)
-.+++|+|.+.+.++.... ..+ ..+..++||.+.
T Consensus 220 ~~~~~d~a~~~~~~~~~~~-~~~~g~~~~~~~g~~~ 254 (255)
T TIGR01963 220 FVTVDEVAETALFLASDAA-AGITGQAIVLDGGWTA 254 (255)
T ss_pred CcCHHHHHHHHHHHcCccc-cCccceEEEEcCcccc
Confidence 4578999999888887532 333 356778888763
No 43
>PF09863 DUF2090: Uncharacterized protein conserved in bacteria (DUF2090); InterPro: IPR018659 This domain, found in various prokaryotic carbohydrate kinases, has no known function.
Probab=23.27 E-value=8.1e+02 Score=25.03 Aligned_cols=189 Identities=22% Similarity=0.290 Sum_probs=115.9
Q ss_pred eeccccccccccCCccchHHHhhCCCcceeecCCccccccCCCCCcccCChhhHHHHHHHHhHcCCcceeee--eeeec-
Q 018326 73 ILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWR--AVLKI- 149 (358)
Q Consensus 73 ILfeETl~q~~~~G~~~~~~L~~~GIvpGIKvDkGl~~l~~~~ge~~t~GLD~L~~R~~~y~~~Ga~FaKWR--sVi~i- 149 (358)
||-|+|+.|.. -.-...+|...|-=| .+||+.-=. -++=+++...+. -|- -|+|.
T Consensus 89 iL~D~~~Gqda------L~~atg~G~WIgRPv-----E~pgSrPL~-fE~G~digs~L~----------~WP~ehvVKcL 146 (311)
T PF09863_consen 89 ILCDGRYGQDA------LNAATGRGWWIGRPV-----ELPGSRPLR-FEHGRDIGSQLI----------EWPQEHVVKCL 146 (311)
T ss_pred EEeecchhHHH------HHHHhcCCCeEEeec-----ccCCCCcee-eecCcCHHHHHH----------hCCcccEEEEE
Confidence 78889999851 112247787777654 234443211 122234433333 342 13332
Q ss_pred ----CCCCchHHHHHHHHHHHHHHHHHHHhCCcceee---cceecCCCCCChhhHHHHHHHHHHHHHHHhhcCCceeecc
Q 018326 150 ----GPNEPSQLAINENANGLARYAIICQENGLVPIV---EPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGT 222 (358)
Q Consensus 150 ----~~~~Ps~~aI~~na~~LAryA~icQ~~GLVPIV---EPEVl~dgdh~ie~~~~vt~~vl~~v~~~L~~~~V~Leg~ 222 (358)
.++.|... .++-..|-+--..|+++|.==.+ =|.. +..+ ...+...++.+++-||
T Consensus 147 vfyHPdD~~~lr--~~Qe~~l~~l~~ac~~sg~ElLLEvI~p~~---~~~~--------~~~~~~ai~r~Y~lGI----- 208 (311)
T PF09863_consen 147 VFYHPDDDPELR--LEQEAQLRRLYDACRRSGHELLLEVIPPKD---MPVD--------DDTYARAIERFYNLGI----- 208 (311)
T ss_pred eecCCCCCHHHH--HHHHHHHHHHHHHHHhcCcceeEEEecCCC---CCCC--------hHHHHHHHHHHHHcCC-----
Confidence 23323333 56667788888889999954333 3433 2222 2334456777888787
Q ss_pred ccccCCCC-CCCCCCCCCHHHHHHHHHHHhhccCCCCCceEEecCCCCCHHHHHHHHHHhcccCCCCCCeeEEeehhhhc
Q 018326 223 LLKPNMVT-PGSEAPKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQ 301 (358)
Q Consensus 223 lLKpnmv~-pG~~~~~~~~~evA~~Tv~~l~r~vP~aVpgVvFLSGG~s~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq 301 (358)
||.... |+.+. -+-..+..+-+.-.|-+-|||.|-=+.++++-..=+++-- ..||--.|--||.+=
T Consensus 209 --~PDWWKLep~s~-------~~W~~i~~~I~~~Dp~crGvVvLGLdAP~e~L~~~F~~Aa----~~p~vkGFAVGRTIF 275 (311)
T PF09863_consen 209 --KPDWWKLEPLSA-------AAWQAIEALIEERDPYCRGVVVLGLDAPEEELAAGFAAAA----GSPLVKGFAVGRTIF 275 (311)
T ss_pred --CCCeeccCCCCH-------HHHHHHHHHHHHhCCCceeEEEecCCCCHHHHHHHHHHhh----CCCceeeeeechhhh
Confidence 444432 44421 1334455566667899999999999999998888777632 258999999999999
Q ss_pred HHHHHHhcCCccc
Q 018326 302 QSTLKAWAGKEEN 314 (358)
Q Consensus 302 ~~~l~~W~G~~~n 314 (358)
..+.+.|-...=+
T Consensus 276 ~~~sr~Wl~g~i~ 288 (311)
T PF09863_consen 276 GEPSRAWLAGEID 288 (311)
T ss_pred HHHHHHHHcCCCC
Confidence 9999999755433
No 44
>COG0285 FolC Folylpolyglutamate synthase [Coenzyme metabolism]
Probab=23.15 E-value=1.3e+02 Score=31.64 Aligned_cols=64 Identities=20% Similarity=0.249 Sum_probs=35.7
Q ss_pred EEecCCCCCHHHHHHHHHHhcccCCCCCCeeE-EeehhhhcHHHHHHhcCCcccHH-HHHHHHHHHHH
Q 018326 262 VVFLSGGQSEEEATRNLNAMNQLKTKKPWSLS-FSFGRALQQSTLKAWAGKEENVQ-KAQAAFLVRCK 327 (358)
Q Consensus 262 VvFLSGG~s~eeAt~~LnaiN~~~~~~PW~ls-FSfgRALq~~~l~~W~G~~~nv~-~AQ~~l~~ra~ 327 (358)
+.++.|-++..|...-|+..... ..-|-++ |.+-||+-...|..-.+...++. ...+..+.+++
T Consensus 331 ~~~v~g~l~dKd~~~~l~~L~~~--~~~~~~~~~~~~ra~~~~~l~~~~~~~~~~~~~~~~~a~~~~~ 396 (427)
T COG0285 331 LTLVFGMLKDKDIAGMLAALLPI--VDEIYTTPLPWPRALDAEELLAFAGERGGVELDDVAEALELAL 396 (427)
T ss_pred eEEEEEeecCCCHHHHHHHhhcc--CcEEEEccCCCcccCCHHHHHHHHHhhcCCccccHHHHHHHHH
Confidence 55566666666666666666554 2335444 77777777777765555443332 33444444443
No 45
>TIGR01227 hutG formimidoylglutamase. Formiminoglutamase, the fourth enzyme of histidine degradation, is similar to arginases and agmatinases. It is often encoded near other enzymes of the histidine degredation pathway: histidine ammonia-lyase, urocanate hydratase, and imidazolonepropionase.
Probab=22.61 E-value=2.9e+02 Score=27.06 Aligned_cols=88 Identities=19% Similarity=0.291 Sum_probs=51.0
Q ss_pred CcceeecCCccccccCCCCCcccCChhhHHHHHHHHhHcCCcceeee-eeeecCCCCchHHHHHHHHHHHHHHHHHHHhC
Q 018326 98 VLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWR-AVLKIGPNEPSQLAINENANGLARYAIICQEN 176 (358)
Q Consensus 98 IvpGIKvDkGl~~l~~~~ge~~t~GLD~L~~R~~~y~~~Ga~FaKWR-sVi~i~~~~Ps~~aI~~na~~LAryA~icQ~~ 176 (358)
.|.|+-.|.|...-.+.+|- -.|=+.+++-...+...+ |. .+...++-......+.+..+.+.+..+.+.+.
T Consensus 38 ~iiGvP~d~g~~~n~~r~G~--~~gP~aiR~a~~~~~~~~-----~~~~i~D~Gdv~~~~~~~~~~~~~i~~~v~~~~~~ 110 (307)
T TIGR01227 38 ALIGFPLDKGVIRNKGRRGA--RHGPSAIRQALAHLGDWH-----VSELLYDLGDIVIHGDDLEDTQHEIAQTAAALLAD 110 (307)
T ss_pred EEEeeccCccccCCCCCcCh--hHCHHHHHHHHHhccccC-----CCCEEEeCCCCccCchhHHHHHHHHHHHHHHHHhc
Confidence 36778788887531112222 234455554444321111 11 25555543222234677888888888888889
Q ss_pred CcceeecceecCCCCCChhhH
Q 018326 177 GLVPIVEPEILVDGPHDINKC 197 (358)
Q Consensus 177 GLVPIVEPEVl~dgdh~ie~~ 197 (358)
|.+||+ +-|||++.-.
T Consensus 111 g~~Pi~-----lGGdHsit~~ 126 (307)
T TIGR01227 111 HRVPVI-----LGGGHSIAYA 126 (307)
T ss_pred CCeEEE-----ECCcchhHHH
Confidence 999976 8999996553
No 46
>PF08821 CGGC: CGGC domain; InterPro: IPR014925 Proteins in this entry are a quite highly conserved sequence of CGGC in its central region. The region has many conserved cysteines and histidines suggestive of a zinc binding function.
Probab=22.09 E-value=68 Score=27.36 Aligned_cols=48 Identities=23% Similarity=0.369 Sum_probs=29.8
Q ss_pred hhhHHHHHHHHhHcCCcceeeeeeeecCCCCchHHHHHH-----HHHHHHHHHHHHHhC-Ccceeec
Q 018326 123 LDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINE-----NANGLARYAIICQEN-GLVPIVE 183 (358)
Q Consensus 123 LD~L~~R~~~y~~~Ga~FaKWRsVi~i~~~~Ps~~aI~~-----na~~LAryA~icQ~~-GLVPIVE 183 (358)
-.+|..|.+++.+.|+. +|.++. ||.. -+--+-.+++++++. |+ |||+
T Consensus 51 g~~~~~~~~~l~~~~~d------~IHlss------C~~~~~~~~~CP~~~~~~~~I~~~~gi-~VV~ 104 (107)
T PF08821_consen 51 GRKLVRRIKKLKKNGAD------VIHLSS------CMVKGNPHGPCPHIDEIKKIIEEKFGI-EVVE 104 (107)
T ss_pred hhHHHHHHHHHHHCCCC------EEEEcC------CEecCCCCCCCCCHHHHHHHHHHHhCC-CEee
Confidence 45678888888889977 565552 1111 111244566677777 87 8875
No 47
>PRK15418 transcriptional regulator LsrR; Provisional
Probab=20.75 E-value=5.5e+02 Score=25.55 Aligned_cols=90 Identities=11% Similarity=0.242 Sum_probs=48.9
Q ss_pred HHHHHHHHHhCCcceeecceecCCCCCChhhHHHHHHHHHHHHHHHhhcCCceeeccccccCCCCCCCCCCCCCHHHHHH
Q 018326 166 LARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAPKVTPDVIAE 245 (358)
Q Consensus 166 LAryA~icQ~~GLVPIVEPEVl~dgdh~ie~~~~vt~~vl~~v~~~L~~~~V~Leg~lLKpnmv~pG~~~~~~~~~evA~ 245 (358)
..|+=+.|++.|+|=| -++ |...+|.+.+++ |..-| .|.+.-| -|+ .+. ....+.|+.
T Consensus 46 VsRlL~~Ar~~GiV~I-----~I~--~~~~~~~~Le~~-L~~~f-gLk~~iV-------vp~-----~~~-~~~~~~vg~ 103 (318)
T PRK15418 46 VSRLLEKGRQSGIIRV-----QIN--SRFEGCLELENA-LRQHF-SLQHIRV-------LPA-----LAD-ADIGGRLGI 103 (318)
T ss_pred HHHHHHHHHHcCcEEE-----EEe--CCCccHHHHHHH-HHHHh-CCCEEEE-------EeC-----CCc-ccHHHHHHH
Confidence 3566666779998743 333 344566665555 33334 2332211 132 111 113466777
Q ss_pred HHHHHhhccCCCCCceEEecCCCCCHHHHHHHHH
Q 018326 246 HTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLN 279 (358)
Q Consensus 246 ~Tv~~l~r~vP~aVpgVvFLSGG~s~eeAt~~Ln 279 (358)
+....|.+.+++. -++-+|+|.+-.....+|.
T Consensus 104 ~aA~~L~~~l~~~--~~IGvswG~Tl~~~~~~l~ 135 (318)
T PRK15418 104 GAAHMLMSLLQPQ--QLLAVGFGEATMNTLQHLS 135 (318)
T ss_pred HHHHHHHHhcCCC--CEEEEcchHHHHHHHHhcc
Confidence 7777777776663 2555577777666555554
No 48
>KOG0681 consensus Actin-related protein - Arp5p [Cytoskeleton]
Probab=20.22 E-value=98 Score=33.97 Aligned_cols=90 Identities=24% Similarity=0.457 Sum_probs=53.3
Q ss_pred hhcCCceeeccccccCCCCCCCCCCCCCHHHHHHHHHHHhhccCCCCCceEEecCCCCCH-----HHHHHHHHHhcccCC
Q 018326 212 LNDHHVLLEGTLLKPNMVTPGSEAPKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSE-----EEATRNLNAMNQLKT 286 (358)
Q Consensus 212 L~~~~V~Leg~lLKpnmv~pG~~~~~~~~~evA~~Tv~~l~r~vP~aVpgVvFLSGG~s~-----eeAt~~LnaiN~~~~ 286 (358)
++-..+-..=+|+.|||+ |.+ ++.-.|++..-++-+-..-+-.+.-=|||.||-|. +.-..-|-.|
T Consensus 515 ~nVEriRvPEIiFqPsii--G~d--QaGl~Ei~~~il~r~p~~eq~~lV~nVllTGG~s~~pGmkeRi~kElt~m----- 585 (645)
T KOG0681|consen 515 LNVERIRVPEIIFQPSII--GID--QAGLAEIMDTILRRYPHDEQEKLVSNVLLTGGCSQLPGMKERIKKELTSM----- 585 (645)
T ss_pred hcceeeccceeeeccccc--cch--hhhHHHHHHHHHHhCchhhhHhhhhheEeecccccCcCHHHHHHHHhhee-----
Confidence 344455566788999987 333 55677777654443322222222335899999873 2222222222
Q ss_pred CCCCeeEEeehhhhcHHHHHHhcCCc
Q 018326 287 KKPWSLSFSFGRALQQSTLKAWAGKE 312 (358)
Q Consensus 287 ~~PW~lsFSfgRALq~~~l~~W~G~~ 312 (358)
.|-+-+|---|| -+++|-+|.|-.
T Consensus 586 -rP~gS~i~V~ra-sdP~LDAW~GA~ 609 (645)
T KOG0681|consen 586 -RPVGSSINVVRA-SDPVLDAWRGAS 609 (645)
T ss_pred -cccCCceEEEec-CCcchhhhhhhH
Confidence 466666666676 479999999953
Done!