Query 018326
Match_columns 358
No_of_seqs 132 out of 703
Neff 4.4
Searched_HMMs 29240
Date Mon Mar 25 13:30:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018326.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018326hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kx6_A Fructose-bisphosphate a 100.0 9E-158 3E-162 1153.1 34.2 352 3-358 25-379 (379)
2 2pc4_A 41 kDa antigen, fructos 100.0 2E-154 6E-159 1130.0 33.5 353 4-358 14-369 (369)
3 2qap_A Fructose-1,6-bisphospha 100.0 6E-154 2E-158 1131.9 35.3 353 4-358 37-391 (391)
4 3mbd_A Fructose-bisphosphate a 100.0 7E-154 2E-158 1114.9 30.9 336 2-339 4-340 (342)
5 3mmt_A Fructose-bisphosphate a 100.0 2E-151 6E-156 1099.9 31.3 335 7-342 4-343 (347)
6 3bv4_A Fructose-bisphosphate a 100.0 6E-151 2E-155 1097.0 34.8 335 4-338 4-340 (341)
7 2iqt_A Fructose-bisphosphate a 100.0 4E-106 1E-110 770.7 17.7 261 14-313 6-278 (296)
8 3iv3_A Tagatose 1,6-diphosphat 97.0 0.017 5.8E-07 56.5 15.8 245 26-309 26-292 (332)
9 1to3_A Putative aldolase YIHT; 81.7 33 0.0011 32.5 14.3 244 18-306 10-263 (304)
10 1w8s_A FBP aldolase, fructose- 78.9 24 0.00082 32.5 12.1 170 102-326 77-251 (263)
11 3apt_A Methylenetetrahydrofola 71.8 23 0.0008 33.6 10.2 159 8-188 27-210 (310)
12 3fst_A 5,10-methylenetetrahydr 70.5 28 0.00097 33.1 10.5 162 3-188 32-213 (304)
13 3sy1_A UPF0001 protein YGGS; e 47.4 1.1E+02 0.0037 27.9 9.7 146 37-196 44-211 (245)
14 3ngf_A AP endonuclease, family 44.2 1.3E+02 0.0043 26.4 9.4 61 122-184 91-151 (269)
15 3vni_A Xylose isomerase domain 40.8 1.3E+02 0.0043 26.5 8.9 94 88-185 51-153 (294)
16 3qja_A IGPS, indole-3-glycerol 36.6 2.6E+02 0.0088 25.8 12.1 131 130-324 128-260 (272)
17 1i60_A IOLI protein; beta barr 36.5 1.5E+02 0.0052 25.4 8.6 91 89-186 51-145 (278)
18 3qc0_A Sugar isomerase; TIM ba 34.5 1.2E+02 0.004 26.2 7.5 94 88-185 49-144 (275)
19 2xw6_A MGS, methylglyoxal synt 32.5 50 0.0017 28.1 4.5 83 6-97 12-105 (134)
20 3tva_A Xylose isomerase domain 31.2 1.2E+02 0.0043 26.6 7.2 61 120-185 98-160 (290)
21 3u0h_A Xylose isomerase domain 25.9 2.6E+02 0.009 24.0 8.3 91 89-185 52-143 (281)
22 1nsj_A PRAI, phosphoribosyl an 25.2 32 0.0011 30.7 2.2 29 263-297 154-182 (205)
23 2hk0_A D-psicose 3-epimerase; 23.6 3.5E+02 0.012 24.0 8.9 91 89-185 71-172 (309)
24 3bil_A Probable LACI-family tr 23.0 4.2E+02 0.014 23.9 13.1 164 67-255 121-311 (348)
25 3rft_A Uronate dehydrogenase; 22.8 3.2E+02 0.011 23.8 8.3 112 154-269 79-209 (267)
26 2yvq_A Carbamoyl-phosphate syn 21.7 64 0.0022 26.9 3.3 65 6-79 33-107 (143)
27 1b93_A Protein (methylglyoxal 21.4 64 0.0022 28.0 3.3 84 6-98 20-114 (152)
28 1v5x_A PRA isomerase, phosphor 21.3 42 0.0014 30.0 2.1 29 263-298 149-177 (203)
29 3glc_A Aldolase LSRF; TIM barr 21.0 5.2E+02 0.018 24.2 11.0 189 68-325 85-276 (295)
30 3ijd_A Uncharacterized protein 21.0 1.2E+02 0.0042 29.0 5.5 56 122-189 163-221 (315)
31 1r88_A MPT51/MPB51 antigen; AL 20.9 1.5E+02 0.0051 26.1 5.7 48 168-216 230-277 (280)
32 2zds_A Putative DNA-binding pr 20.4 4.5E+02 0.015 23.3 9.0 31 155-185 151-181 (340)
33 1pya_A Pyruvoyl-dependent hist 20.2 38 0.0013 26.9 1.4 30 95-134 34-63 (81)
34 4do4_A Alpha-N-acetylgalactosa 20.2 1.1E+02 0.0038 28.8 5.0 58 85-146 83-141 (400)
35 2r25_B Osmosensing histidine p 20.1 2.8E+02 0.0097 20.8 6.6 33 247-280 70-102 (133)
No 1
>3kx6_A Fructose-bisphosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, glycolysis, lyase, STRU genomics; HET: CIT; 2.10A {Babesia bovis}
Probab=100.00 E-value=8.7e-158 Score=1153.06 Aligned_cols=352 Identities=59% Similarity=0.933 Sum_probs=333.8
Q ss_pred CcchhhHHHHHHHHHHhcCCCCceEeecCCCCChHHHhhhCCCCCccchHhhhhhhhcccCCcCCceeEEeecccccccc
Q 018326 3 CFKGKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQYLSGVILFEETLYQK 82 (358)
Q Consensus 3 ~~~~~~~~eL~~ta~~~~a~gKGiLAaDES~gt~~Krl~~~Gvente~nrr~yR~~l~ttp~~~~~IsGvILfeETl~q~ 82 (358)
.++.++++||++||++|++|||||||||||+|||+|||++|||||||||||+||+||||||+|++||||||||||||+|+
T Consensus 25 ~~~~~~~~eL~~~A~~ivapGKGiLAADES~gT~~Krl~~iGventeenrr~yR~lLftsp~~~~~IsGvILFeETl~Qk 104 (379)
T 3kx6_A 25 KLSQERAKELAENASFIASPGKGILAADESTGTIQKRFDNVGVENTEKNRAEYRSILFTTKGLGKYISGCILFEETLFQQ 104 (379)
T ss_dssp SCCHHHHHHHHHHHHHHTCTTCEEEEECCCHHHHHHHHHTTTCCCCHHHHHHHHHHHHTCTTGGGTEEEEEECHHHHTCB
T ss_pred hcChHHHHHHHHHHHHHhCCCCceEEecCCCCcHHHHHHHcCCCCcHHHHHHHHHHhhcCcccccceeEEEcchhhcccc
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCccchHHHhhCCCcceeecCCccccccCCCCCcccCChhhHHHHHHHHhHcCCcceeeeeeeecCCC--CchHHHHH
Q 018326 83 TAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPN--EPSQLAIN 160 (358)
Q Consensus 83 ~~~G~~~~~~L~~~GIvpGIKvDkGl~~l~~~~ge~~t~GLD~L~~R~~~y~~~Ga~FaKWRsVi~i~~~--~Ps~~aI~ 160 (358)
++||+||+|+|+++|||||||||||++||+|++||++|||||||++||++||++|||||||||||+|++. +||.++|.
T Consensus 105 ~~dG~pf~~~L~~kGIvPGIKVDkG~~pl~g~~ge~~tqGLDgL~eRca~y~~~Ga~FAKWR~Vlki~~~~g~PS~~aI~ 184 (379)
T 3kx6_A 105 APNGQNMVDLLRAEGILPGIKVDKGLVTIPNTDEEVSTTGLDGLAERCQKYYNAGARFAKWRAVLSIDVKKNKPSNLSIL 184 (379)
T ss_dssp CTTSCBHHHHHHHHTCEEEEECCCCEEECTTSSSCEEECCCTTHHHHHHHHHHTTCCEEEEEEEECCBTTTTBSCHHHHH
T ss_pred ccCCCCHHHHHHHCCCccEEEcCCCccccCCCCCCccCCChHHHHHHHHHHhhcCCCceeeeeeEeecCCCCCCcHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999987 99999999
Q ss_pred HHHHHHHHHHHHHHhCCcceeecceecCCCCCChhhHHHHHHHHHHHHHHHhhcCCceeeccccccCCCCCCCCC-CCCC
Q 018326 161 ENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEA-PKVT 239 (358)
Q Consensus 161 ~na~~LAryA~icQ~~GLVPIVEPEVl~dgdh~ie~~~~vt~~vl~~v~~~L~~~~V~Leg~lLKpnmv~pG~~~-~~~~ 239 (358)
+||++|||||+|||++||||||||||||||||||++|++|||+||++||++|++|+|+|||||||||||+||++| .+++
T Consensus 185 ena~~LArYA~icQ~~GLVPIVEPEVl~dGdHdi~~c~~Vte~VLa~vykaL~dh~V~LEG~lLKPnMV~pG~~~~~k~s 264 (379)
T 3kx6_A 185 ETAHTLARYAAICQENGLVPIVEPEILADGDHSIEVCAEVTERVLAAVFKALNDHKVLLEGALLKPNMVTQGVDCKDKPA 264 (379)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEECCCCCCCCTTCSCCCC
T ss_pred HHHHHHHHHHHHHHHcCcceeeeeeeCCCCCcCHHHHHHHHHHHHHHHHHHHHhCCccccCcccccCcccCCCcCCCcCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999 8999
Q ss_pred HHHHHHHHHHHhhccCCCCCceEEecCCCCCHHHHHHHHHHhcccCCCCCCeeEEeehhhhcHHHHHHhcCCcccHHHHH
Q 018326 240 PDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQ 319 (358)
Q Consensus 240 ~~evA~~Tv~~l~r~vP~aVpgVvFLSGG~s~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~~~l~~W~G~~~nv~~AQ 319 (358)
|+|||++||++|+|||||+||||+|||||||+||||.||||||+++ ++||.||||||||||+++||+|+||++|+++||
T Consensus 265 ~eeVA~aTv~~L~rtVP~avpGI~FLSGGqSeeeAt~nLnAmN~~~-~~PW~LsFSyGRALQ~s~LkaW~Gk~eNv~aaQ 343 (379)
T 3kx6_A 265 PQTVGFLTSRALRRTVPPALPGVMFLSGGQSESMATRHLNEINKCN-KHPWSLSFSYGRALQSSVLKTWNGSMSNAAAAQ 343 (379)
T ss_dssp HHHHHHHHHHHHHTTCCTTSCEEEECCTTCCHHHHHHHHHHHHHTC-CCSSEEEEEESHHHHHHHHHHHTTCGGGHHHHH
T ss_pred HHHHHHHHHHHHHhcCCcccCcceecCCCCCHHHHHHHHHHHhhcC-CCCcceeeechhhhchHHHHHHhcCchhHHHHH
Confidence 9999999999999999999999999999999999999999999986 689999999999999999999999999999999
Q ss_pred HHHHHHHHhcchhhcCCccCCCCCCcccccccccccccC
Q 018326 320 AAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 358 (358)
Q Consensus 320 ~~l~~ra~~n~~A~~G~y~~~~~~~~~~~~~l~~~~~~y 358 (358)
++|++||++||+|++|+|.++++ ++++|||++||+|
T Consensus 344 ~~l~~Ra~~Ns~A~~Gky~~~~~---~a~~sl~v~~~~y 379 (379)
T 3kx6_A 344 DVLMKLAQQNSEASLGSLKTDLS---DDGESLFEAKYIY 379 (379)
T ss_dssp HHHHHHHHHHHHHTTTCCC-----------------CCC
T ss_pred HHHHHHHHhhhHHhcCCcCCCcc---cccccccccCccC
Confidence 99999999999999999998875 6689999999998
No 2
>2pc4_A 41 kDa antigen, fructose-bisphosphate aldolase; invasion machinery, structu genomics, PSI, protein structure initiative; 2.40A {Plasmodium falciparum} PDB: 2eph_A 1a5c_A
Probab=100.00 E-value=1.9e-154 Score=1129.97 Aligned_cols=353 Identities=58% Similarity=0.906 Sum_probs=339.5
Q ss_pred cchhhHHHHHHHHHHhcCCCCceEeecCCCCChHHHhhhCCCCCccchHhhhhhhhcccCCcCCceeEEeeccccccccc
Q 018326 4 FKGKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQYLSGVILFEETLYQKT 83 (358)
Q Consensus 4 ~~~~~~~eL~~ta~~~~a~gKGiLAaDES~gt~~Krl~~~Gvente~nrr~yR~~l~ttp~~~~~IsGvILfeETl~q~~ 83 (358)
.+.++++||++||++|++|||||||||||+|||+|||++|||||||||||+||+||||||++++||||||||||||+|++
T Consensus 14 ~~~~~~~eL~~~a~~iva~GKGiLAADES~gT~~Krl~~iGventeenrr~yR~ll~tsp~~~~~IsGvILfeETl~qk~ 93 (369)
T 2pc4_A 14 LPADVAEELATTAQKLVQAGKGILAADESTQTIKKRFDNIKLENTIENRASYRDLLFGTKGLGKFISGAILFEETLFQKN 93 (369)
T ss_dssp CCHHHHHHHHHHHHHHTCTTCEEEEECCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTCTTCTTTEEEEEECHHHHTCBC
T ss_pred CCHHHHHHHHHHHHHHhCCCCceEEecCCCCchHHHHHHcCCCCchHHHHHHHHHhccCCCcccceEEEEcchHhccCcC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccchHHHhhCCCcceeecCCccccccCCCCCcccCChhhHHHHHHHHhHcCCcceeeeeeeecCC--CCchHHHHHH
Q 018326 84 AAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGP--NEPSQLAINE 161 (358)
Q Consensus 84 ~~G~~~~~~L~~~GIvpGIKvDkGl~~l~~~~ge~~t~GLD~L~~R~~~y~~~Ga~FaKWRsVi~i~~--~~Ps~~aI~~ 161 (358)
+||+||+|+|+++|||||||||||++||+|++||++|||||||++||++||++|||||||||||+|++ ++||+.+|.+
T Consensus 94 ~dG~pf~~~L~~kGIvPGIKVDkGl~pl~g~~~e~~tqGLDgL~eR~a~y~~~Ga~FAKWR~Viki~~~~~~PS~~aI~~ 173 (369)
T 2pc4_A 94 EAGVPMVNLLHNENIIPGIKVDKGLVNIPCTDEEKSTQGLDGLAERCKEYYKAGARFAKWRTVLVIDTAKGKPTDLSIHE 173 (369)
T ss_dssp TTSCBHHHHHHHHTCEEEEECCCCEEECTTSSSCEEECCCTTHHHHHHHHHHHTCCEEEEEEEECCBGGGTBSCHHHHHH
T ss_pred cCCcCHHHHHHHCCCceEEEcCCCcccCCCCCCCcCCCChhhHHHHHHHHHhCCCCeeeeeEEEEecCCCCCCcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998 9999999999
Q ss_pred HHHHHHHHHHHHHhCCcceeecceecCCCCCChhhHHHHHHHHHHHHHHHhhcCCceeeccccccCCCCCCCCC-CCCCH
Q 018326 162 NANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEA-PKVTP 240 (358)
Q Consensus 162 na~~LAryA~icQ~~GLVPIVEPEVl~dgdh~ie~~~~vt~~vl~~v~~~L~~~~V~Leg~lLKpnmv~pG~~~-~~~~~ 240 (358)
||++|||||+|||++||||||||||||||||||++|++|+++||+++|++|++|+|||||||||||||+||.+| .+++|
T Consensus 174 na~~LArYA~icQ~~GLVPIVEPEVl~dG~h~l~~~~~vte~vL~~~~~aL~d~~V~LegtLLKpnmv~~G~~~~~k~s~ 253 (369)
T 2pc4_A 174 TAWGLARYASICQQNRLVPIVEPEILADGPHSIEVCAVVTQKVLSCVFKALQENGVLLEGALLKPNMVTAGYECTAKTTT 253 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEECCCCCCCCTTCSSCCCH
T ss_pred HHHHHHHHHHHHHHcCccceecceECCCCCCCHHHHHHHHHHHHHHHHHhcCCCeEEecCccCCCccccccccccccCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHhhccCCCCCceEEecCCCCCHHHHHHHHHHhcccCCCCCCeeEEeehhhhcHHHHHHhcCCcccHHHHHH
Q 018326 241 DVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQA 320 (358)
Q Consensus 241 ~evA~~Tv~~l~r~vP~aVpgVvFLSGG~s~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~~~l~~W~G~~~nv~~AQ~ 320 (358)
++||++||++|+|||||+||||||||||||+||||.|||+||+++ ++||.||||||||||+++||+|.||++|+++||+
T Consensus 254 e~vA~~Tv~~L~rtvPpaVpgI~fLSGGqSeeeAt~~LnamN~~~-~~PW~lsFSygRALq~~~lk~W~Gk~env~aaQ~ 332 (369)
T 2pc4_A 254 QDVGFLTVRTLRRTVPPALPGVVFLSGGQSEEEASVNLNSINALG-PHPWALTFSYGRALQASVLNTWQGKKENVAKARE 332 (369)
T ss_dssp HHHHHHHHHHHHHHCCTTSCEEEECCTTCCHHHHHHHHHHHHHTC-CCSSEEEEEESHHHHHHHHHTTTTCTTTHHHHHH
T ss_pred HHHHHHHHHHHHhcCCccCCeeeeCCCCCCHHHHHHHHHHhhcCC-CCCceeEEehHHhhhhHHHHHhCCChHHHHHHHH
Confidence 999999999999999999999999999999999999999999986 7899999999999999999999999999999999
Q ss_pred HHHHHHHhcchhhcCCccCCCCCCcccccccccccccC
Q 018326 321 AFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 358 (358)
Q Consensus 321 ~l~~ra~~n~~A~~G~y~~~~~~~~~~~~~l~~~~~~y 358 (358)
+|++|||+||+|++|+|.++. .+.++++|||++||+|
T Consensus 333 ~l~~ra~~n~~A~~G~y~~~~-~~~~~~~sl~v~~~~y 369 (369)
T 2pc4_A 333 VLLQRAEANSLATYGKYKGGA-GGENAGASLYEKKYVY 369 (369)
T ss_dssp HHHHHHHHHHHHHHTCCCCCC-C-----CCCCCCC---
T ss_pred HHHHHHHhhhHHhcCcccCCC-CccccccceeeccccC
Confidence 999999999999999997766 3556788999999998
No 3
>2qap_A Fructose-1,6-bisphosphate aldolase; beta barrel, fructose-1,6-bisphosphate teminal tail, lyase; 1.59A {Leishmania mexicana} SCOP: c.1.10.1 PDB: 2qdg_A* 2qdh_A* 1epx_A 1f2j_A
Probab=100.00 E-value=5.9e-154 Score=1131.95 Aligned_cols=353 Identities=49% Similarity=0.782 Sum_probs=334.1
Q ss_pred cchhhHHHHHHHHHHhcCCCCceEeecCCCCChHHHhhhCCCCCccchHhhhhhhhcccCCcCCceeEEeeccccccccc
Q 018326 4 FKGKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQYLSGVILFEETLYQKT 83 (358)
Q Consensus 4 ~~~~~~~eL~~ta~~~~a~gKGiLAaDES~gt~~Krl~~~Gvente~nrr~yR~~l~ttp~~~~~IsGvILfeETl~q~~ 83 (358)
.+.++++||.+||++|++|||||||||||+|||+|||++|||||||||||+||+||||||++++||||||||||||+|++
T Consensus 37 ~~~~~~~eL~~~a~~iva~GKGiLAADES~gT~~Krl~~iGventeenrr~yR~lL~tsp~~~~~IsGvILFeETl~Qk~ 116 (391)
T 2qap_A 37 LKTPYESELIATVKKLTTPGKGLLAADESIGSCTKRFQPIGLSNTEEHRRQYRALMLEAEGFEQYISGVILHDETVGQKA 116 (391)
T ss_dssp CCCTTHHHHHHHHHHHTCTTCEEEEECCCTTTHHHHHGGGTCCCCHHHHHHHHHHHHTCTTGGGTEEEEEECHHHHTCBC
T ss_pred CCHHHHHHHHHHHHHHcCCCCceEEecCCCCchHHHHHhcCCCCCchhhHHHHHheecCCCccCceEEEEcchHhccCcC
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccchHHHhhCCCcceeecCCcccccc-CCCCCcccCChhhHHHHHHHHhHcCCcceeeeeeeecCCCCchHHHHHHH
Q 018326 84 AAGKPFVDVLKEGGVLPGIKVDKGTVELA-GTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINEN 162 (358)
Q Consensus 84 ~~G~~~~~~L~~~GIvpGIKvDkGl~~l~-~~~ge~~t~GLD~L~~R~~~y~~~Ga~FaKWRsVi~i~~~~Ps~~aI~~n 162 (358)
+||+||+|+|+++|||||||||||++||+ |++||++|||||||++||++||++|||||||||||+|++++||..||.+|
T Consensus 117 ~dG~pf~~~L~~kGIvPGIKVDkGl~pl~~G~~~e~~tqGLDgL~eR~a~y~~~Ga~FAKWRsViki~~~~PS~~aI~~n 196 (391)
T 2qap_A 117 SNGQTFPEYLTARGVVPGIKTDMGLCPLLEGAEGEQMTEGLDGYVKRASAYYKKGCRFCKWRNVYKIQNGTVSESAVRFN 196 (391)
T ss_dssp TTSSBHHHHHHHTTCEEEEECCCCEEECSSSSTTCEEECCCTTHHHHHHHHHHTTCCEEEEEEEECCBTTBCCHHHHHHH
T ss_pred cCCcCHHHHHHHCCCeeEEEecCCcccccCCCCCCccCCChhHHHHHHHHHHhcCCcceeeeeEEeccCCCCCHHHHHHH
Confidence 99999999999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCcceeecceecCCCCCChhhHHHHHHHHHHHHHHHhhcCCceeeccccccCCCCCCCCC-CCCCHH
Q 018326 163 ANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEA-PKVTPD 241 (358)
Q Consensus 163 a~~LAryA~icQ~~GLVPIVEPEVl~dgdh~ie~~~~vt~~vl~~v~~~L~~~~V~Leg~lLKpnmv~pG~~~-~~~~~~ 241 (358)
|++|||||+|||++||||||||||||||||||++|++|||+||++||++|++|+|||||||||||||+||++| .+++|+
T Consensus 197 a~~LArYA~icQ~~GLVPIVEPEVl~dG~H~l~~c~~Vte~vla~v~kaL~d~~V~LegtLLKPnMv~pG~~~~~k~s~e 276 (391)
T 2qap_A 197 AETLARYAILSQMSGLVPIVEPEVMIDGKHDIDTCQRVSEHVWREVVAALQRHGVIWEGCLLKPNMVVPGAESGKTAAPE 276 (391)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCGGGCEECCCCCCCCTTSSCCCCHH
T ss_pred HHHHHHHHHHHHHcCceeeecceECCCCCCCHHHHHHHHHHHHHHHHHHhcCCeEEecCccccCcccccCccccccCCHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred HHHHHHHHHhhccCCCCCceEEecCCCCCHHHHHHHHHHhcccCCCCCCeeEEeehhhhcHHHHHHhcCCcccHHHHHHH
Q 018326 242 VIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAA 321 (358)
Q Consensus 242 evA~~Tv~~l~r~vP~aVpgVvFLSGG~s~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~~~l~~W~G~~~nv~~AQ~~ 321 (358)
|||++||++|+|||||+||||||||||||+||||.||||||+++.++||.||||||||||+++||+|+||++|+++||++
T Consensus 277 evA~~Tv~~L~rtVPpaVpgIvFLSGGqSeeeAt~~LnA~N~~~~~~PW~lsFSygRALq~s~LkaW~Gk~eNv~aaQ~~ 356 (391)
T 2qap_A 277 QVAHYTVMTLARTMPAMLPGVMFLSGGLSEVQASEYLNAINNSPLPRPYFLSFSYARALQSSALKAWGGKESGLAAGRRA 356 (391)
T ss_dssp HHHHHHHHHHHHHSBTTCCEEEECCTTCCHHHHHHHHHHHTTCCSCCCSEEEEEESHHHHHHHHHHHTTSGGGHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCccCeeeeCCCCCCHHHHHHHHhccccCCCCCCcceEEehHHHHhHHHHHHhcCCchhHHHHHHH
Confidence 99999999999999999999999999999999999999999987778999999999999999999999999999999999
Q ss_pred HHHHHHhcchhhcCCccCCCCCCcccccccccccccC
Q 018326 322 FLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 358 (358)
Q Consensus 322 l~~ra~~n~~A~~G~y~~~~~~~~~~~~~l~~~~~~y 358 (358)
|++|||+||+|++|+|.++.+ .++++|||++||+|
T Consensus 357 l~~Ra~~Ns~A~~Gky~~~~~--~~~~~sl~v~~~~y 391 (391)
T 2qap_A 357 FLHRARMNSMAQLGKYKRSDD--DASSSSLYVKGNTY 391 (391)
T ss_dssp HHHHHHHHHHHHTTCCCGGGC--C-------------
T ss_pred HHHHHHhchHhhCcccCCCCC--ccccCceeeccccC
Confidence 999999999999999987765 35678999999998
No 4
>3mbd_A Fructose-bisphosphate aldolase; glycolysis, lyase, schiff base; 2.00A {Encephalitozoon cuniculi} PDB: 3mbf_A* 3qrh_A
Probab=100.00 E-value=7e-154 Score=1114.95 Aligned_cols=336 Identities=41% Similarity=0.655 Sum_probs=330.3
Q ss_pred CCcchhhHHHHHHHHHHhcCCCCceEeecCCCCChHHHhhhCCCCCccchHhhhhhhhcccCCcCCceeEEeeccccccc
Q 018326 2 SCFKGKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQYLSGVILFEETLYQ 81 (358)
Q Consensus 2 ~~~~~~~~~eL~~ta~~~~a~gKGiLAaDES~gt~~Krl~~~Gvente~nrr~yR~~l~ttp~~~~~IsGvILfeETl~q 81 (358)
.+++.++++||++||++|++|||||||||||+|||+|||++|||||||||||+||++|||||+|++||||||||||||+|
T Consensus 4 ~~~~~~~~~eL~~~A~~iva~GKGiLAADES~gt~~Krl~~iGventeenrr~yR~lL~tsp~~~~~IsGvILfeETl~q 83 (342)
T 3mbd_A 4 SMMDCDHLLRLGMTAKKILENGKGILAADETPKTLGRRFEKLGITNTEENRRKFREILFSTKGIERYIGGVILNQETFEQ 83 (342)
T ss_dssp --CCHHHHHHHHHHHHHHHGGGCEEEEECCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTCTTGGGTEEEEEECGGGGGC
T ss_pred ccCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCchHHHHHHcCCCCcHHHHHHHHHHHhcCcccccceeEEEcchhhccc
Confidence 35788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCccchHHHhhCCCcceeecCCccccccCCCCCcccCChhhHHHHHHHHhHcCCcceeeeeeeecCCCCchHHHHHH
Q 018326 82 KTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINE 161 (358)
Q Consensus 82 ~~~~G~~~~~~L~~~GIvpGIKvDkGl~~l~~~~ge~~t~GLD~L~~R~~~y~~~Ga~FaKWRsVi~i~~~~Ps~~aI~~ 161 (358)
+++||+||+++|+++|||||||||||++|| ++||++|||||||++||++||++|||||||||||+|++++||..+|.+
T Consensus 84 k~~dG~pf~~~L~~kGIvpGIKVDkG~~pl--~~ge~~tqGLDgL~eR~a~y~~~Ga~FAKWR~Vlki~~~~PS~~aI~e 161 (342)
T 3mbd_A 84 TSGSGVPLTELLKKKGIEIGIKLDKGLIDY--KEKEKISVGLEDLDLRCKSSAFKDATFAKWRSLFYFYDGIPSEDCINE 161 (342)
T ss_dssp BCTTSCBHHHHHHHTTCEEEEECCCCEEEE--TTTEEEECCGGGHHHHHTCGGGTTCCEEEEEEEECCBTTBSCHHHHHH
T ss_pred cccCCCCHHHHHHHCCCeeEEecCCCCcCC--CCCCccccchHHHHHHHHHHHhcCCceeeeeeEEecCCCCCCHHHHHH
Confidence 999999999999999999999999999999 899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCcceeecceecCCCCCChhhHHHHHHHHHHHHHHHhhcCCceeeccccccCCCCCCCCC-CCCCH
Q 018326 162 NANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEA-PKVTP 240 (358)
Q Consensus 162 na~~LAryA~icQ~~GLVPIVEPEVl~dgdh~ie~~~~vt~~vl~~v~~~L~~~~V~Leg~lLKpnmv~pG~~~-~~~~~ 240 (358)
||++|||||+|||++||||||||||||||||||++|++|||+||++||++|++|+|+|||||||||||+||++| .+++|
T Consensus 162 na~~LarYA~icQ~~GLVPIVEPEVl~dGdHdi~~c~~vte~vla~v~kaL~~h~V~lEG~lLKPnMV~pG~~~~~k~s~ 241 (342)
T 3mbd_A 162 NCSILAKYAIICQKNGLVPIVEPEVFLEGDYSMKRSYEVTRQILSTLMKYLNYELVYIPGVLIKASYVTSGQLSNEKYTP 241 (342)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEEECSSSCCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEECCCCCCTTSCCCCCH
T ss_pred HHHHHHHHHHHHHHcCCceeeeeeECCCCCcCHHHHHHHHHHHHHHHHHHHHhCCccccCcccccccccCCCcCCCcCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999 89999
Q ss_pred HHHHHHHHHHhhccCCCCCceEEecCCCCCHHHHHHHHHHhcccCCCCCCeeEEeehhhhcHHHHHHhcCCcccHHHHHH
Q 018326 241 DVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQA 320 (358)
Q Consensus 241 ~evA~~Tv~~l~r~vP~aVpgVvFLSGG~s~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~~~l~~W~G~~~nv~~AQ~ 320 (358)
+|||++||++|+|||||+||||+|||||||+||||.||||||+++.++||.||||||||||+++||+|+||++|+++||+
T Consensus 242 eeVA~~Tv~~L~rtVP~avpGI~FLSGGqSeeeAt~nLnAmN~~~~~~PW~LsFSygRALQ~s~LkaW~Gk~env~aaQ~ 321 (342)
T 3mbd_A 242 KKVATFTLRALLSTIPCGIPGIVFLSGGHGSEDAIGFLNAINMERGCRTWSLSFSFARALTDGVLETWRGDDSNIEEAQK 321 (342)
T ss_dssp HHHHHHHHHHHHHHCCTTCCEEEECCTTSCHHHHHHHHHHHHHCCCCCSSEEEEEESHHHHHHHHHHHTTCGGGHHHHHH
T ss_pred HHHHHHHHHHHHhcCCcccCcceecCCCCCHHHHHHHHHHHhcCCCCCCeeEEEecchhhhhHHHHHhcCCcccHHHHHH
Confidence 99999999999999999999999999999999999999999999878999999999999999999999999999999999
Q ss_pred HHHHHHHhcchhhcCCccC
Q 018326 321 AFLVRCKANSEATLGTYKG 339 (358)
Q Consensus 321 ~l~~ra~~n~~A~~G~y~~ 339 (358)
+|++|||+||+|++|||-.
T Consensus 322 ~l~~Ra~~N~~A~~Gky~~ 340 (342)
T 3mbd_A 322 ILLETSFKACRGAEGKLWD 340 (342)
T ss_dssp HHHHHHHHHHHHHTTCTTC
T ss_pred HHHHHHHHhhHHhCCCCcC
Confidence 9999999999999999963
No 5
>3mmt_A Fructose-bisphosphate aldolase; ssgcid, structural genomics, seattle structural GE center for infectious disease, hydrolase; HET: 2FP; 2.35A {Bartonella henselae} SCOP: c.1.10.0
Probab=100.00 E-value=1.7e-151 Score=1099.87 Aligned_cols=335 Identities=53% Similarity=0.837 Sum_probs=329.3
Q ss_pred hhHHHHHHHHHHhcCCCCceEeecCCCCChHHHhhhCCCCCccchHhhhhhhhccc-CCcCCceeEEeeccccccccccC
Q 018326 7 KYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCT-PGALQYLSGVILFEETLYQKTAA 85 (358)
Q Consensus 7 ~~~~eL~~ta~~~~a~gKGiLAaDES~gt~~Krl~~~Gvente~nrr~yR~~l~tt-p~~~~~IsGvILfeETl~q~~~~ 85 (358)
.+.+||++||++|++|||||||+|||+|||+|||++|||||||||||+||+||||| |+|++||||||||||||+|+++|
T Consensus 4 ~~~~eL~~~A~~iva~GKGiLAaDES~gT~~Krl~~iGventeenrr~yR~lL~ts~p~~~~~IsGvILfeETl~Qk~~d 83 (347)
T 3mmt_A 4 SMNERLEDIALTLVGAGKGILAADESTATIGKRFESIGVECTEDNRRAYREMLFTAKEAMESAISGVILFDETLRQKAST 83 (347)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTCHHHHHHTEEEEEECHHHHTCBCTT
T ss_pred hHHHHHHHHHHHHhCCCCceEEecCCCCcHHHHHHHcCCCCcHHHHHHHHHHHhcCCcccccceeEEEecHHhccccCcC
Confidence 45589999999999999999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred CccchHHHhhCCCcceeecCCccccccCCCCCcccCChhhHHHHHHHHhHcCCcceeeeeeeecC-CCCchHHHHHHHHH
Q 018326 86 GKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIG-PNEPSQLAINENAN 164 (358)
Q Consensus 86 G~~~~~~L~~~GIvpGIKvDkGl~~l~~~~ge~~t~GLD~L~~R~~~y~~~Ga~FaKWRsVi~i~-~~~Ps~~aI~~na~ 164 (358)
|+||+++|+++|||||||||||++||+|++||++|||||||.+||++||++|||||||||||+|+ +++||..+|.+||+
T Consensus 84 G~pf~~~L~~kGIvpGIKVDkG~~pl~G~~ge~~tqGLDgL~eR~a~y~~~Ga~FAKWR~Viki~~~~~PS~~aI~~na~ 163 (347)
T 3mmt_A 84 GQMLTDLIRDAGAVPGIKVDTGAKPLAAFPQETITEGLDGLRERLKDYYTLGARFAKWRAVIAIDAQTLPTRGAISQNAQ 163 (347)
T ss_dssp SSBHHHHHHHTTCEEEEECCCCEEECTTSTTCEEECCCTTHHHHHHHHHHTTCCEEEEEEEECCCSSSCSCHHHHHHHHH
T ss_pred CCCHHHHHHhCCCccEEEcCCCcccCCCCCCCccCCCchHHHHHHHHHHhcCCcceeeeeEEecCCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999 89999999999999
Q ss_pred HHHHHHHHHHhCCcceeecceecCCC---CCChhhHHHHHHHHHHHHHHHhhcCCceeeccccccCCCCCCCCCCCCCHH
Q 018326 165 GLARYAIICQENGLVPIVEPEILVDG---PHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAPKVTPD 241 (358)
Q Consensus 165 ~LAryA~icQ~~GLVPIVEPEVl~dg---dh~ie~~~~vt~~vl~~v~~~L~~~~V~Leg~lLKpnmv~pG~~~~~~~~~ 241 (358)
+|||||+|||++|||||||||||||| ||||++|++||++||++||++|++|+|+|||||||||||+||++..+++++
T Consensus 164 ~LarYA~icQ~~GLVPIVEPEVl~dG~~~dHdi~~c~~Vte~VL~~v~kaL~dh~V~LEG~lLKPnMV~pG~~~~k~s~e 243 (347)
T 3mmt_A 164 ALARYAALCQEAGLVPIVEPEVLMDGPSRQHSITRCFEVTKVVLHTVFKELFEARVLFEGMILKPNMVIDGKDARIASVE 243 (347)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEECSSSSCCCCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEECCCCSCCCTTSCCCCHH
T ss_pred HHHHHHHHHHHcCccceeCceEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCccccCcccccccccCCCCCCcCCHH
Confidence 99999999999999999999999999 999999999999999999999999999999999999999999987789999
Q ss_pred HHHHHHHHHhhccCCCCCceEEecCCCCCHHHHHHHHHHhcccCCCCCCeeEEeehhhhcHHHHHHhcCCcccHHHHHHH
Q 018326 242 VIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAA 321 (358)
Q Consensus 242 evA~~Tv~~l~r~vP~aVpgVvFLSGG~s~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~~~l~~W~G~~~nv~~AQ~~ 321 (358)
|||++||++|+||||++||||+|||||||+||||.||||||++ .++||.||||||||||+++||+|+||++|+++||++
T Consensus 244 evA~~Tv~~L~rtVP~avpGI~FLSGGqSeeeAt~nLnAmN~~-~~~PW~LsFSygRALQ~s~LkaW~Gk~env~aaQ~~ 322 (347)
T 3mmt_A 244 EVAEKTVHVLKQTVPAAVPGIAFLSGGQTDEEATAHLSAMNAL-GALPWKLTFSYGRALQAAALKAWAGKNENIVVAQKA 322 (347)
T ss_dssp HHHHHHHHHHHHHSCTTSCEEEECCTTCCHHHHHHHHHHHTTS-CCCSSEEEEEESHHHHHHHHHHHTTCGGGHHHHHHH
T ss_pred HHHHHHHHHHHhhCCcccCcceecCCCCCHHHHHHHHHHHhcC-CCCCeeeEeccchhhhHHHHHHhCCChhhHHHHHHH
Confidence 9999999999999999999999999999999999999999997 568999999999999999999999999999999999
Q ss_pred HHHHHHhcchhhcCCccCCCC
Q 018326 322 FLVRCKANSEATLGTYKGDAQ 342 (358)
Q Consensus 322 l~~ra~~n~~A~~G~y~~~~~ 342 (358)
|++|||+||+|++|+|.++++
T Consensus 323 ~~~Ra~~N~~A~~G~y~~~~e 343 (347)
T 3mmt_A 323 FCHRARMNHLAALGQWTKDQE 343 (347)
T ss_dssp HHHHHHHHHHHHTTCCCGGGC
T ss_pred HHHHHHHhHHHHcCCcCcccc
Confidence 999999999999999998876
No 6
>3bv4_A Fructose-bisphosphate aldolase A; lyase, acetylation, glycolysis, phosphoprotein, schiff base; HET: 13P; 1.70A {Oryctolagus cuniculus} PDB: 1ado_A* 1ewd_A 1zai_A* 1zah_A* 1zaj_A* 1zal_A 2ot0_A 2ot1_A* 2qut_A 2quv_A 3lge_A 3tu9_A* 3b8d_A 6ald_A* 1ex5_A 1ewe_A 2quu_A 3dfn_A 3dfo_A 3dfp_A ...
Probab=100.00 E-value=6.3e-151 Score=1097.02 Aligned_cols=335 Identities=61% Similarity=0.922 Sum_probs=330.5
Q ss_pred cchhhHHHHHHHHHHhcCCCCceEeecCCCCChHHHhhhCCCCCccchHhhhhhhhcccCC-cCCceeEEeecccccccc
Q 018326 4 FKGKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPG-ALQYLSGVILFEETLYQK 82 (358)
Q Consensus 4 ~~~~~~~eL~~ta~~~~a~gKGiLAaDES~gt~~Krl~~~Gvente~nrr~yR~~l~ttp~-~~~~IsGvILfeETl~q~ 82 (358)
.+.++++||.+||++|++|||||||||||+|||+|||++|||||||||||+||+||||||+ +++||||||||||||+|+
T Consensus 4 ~~~~~~~eL~~~a~~i~a~GKGiLAADES~gT~~Krl~~iGvente~nrr~yR~ll~tsp~~~~~~IsGvILfeETl~qk 83 (341)
T 3bv4_A 4 LTPEQKKELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQK 83 (341)
T ss_dssp CCHHHHHHHHHHHHHHTCTTCEEEEECCCHHHHHHHHHTTTCCCCHHHHHHHHHHHHTCCGGGTTTEEEEEECHHHHTCB
T ss_pred CCHHHHHHHHHHHHHHhCCCCceEEecCCCCchhHHHHhcCCCCCchhHHHHHhhhhcCCcccccceEEEEcchhhcccc
Confidence 4678999999999999999999999999999999999999999999999999999999999 779999999999999999
Q ss_pred ccCCccchHHHhhCCCcceeecCCccccccCCCCCcccCChhhHHHHHHHHhHcCCcceeeeeeeecCCCCchHHHHHHH
Q 018326 83 TAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINEN 162 (358)
Q Consensus 83 ~~~G~~~~~~L~~~GIvpGIKvDkGl~~l~~~~ge~~t~GLD~L~~R~~~y~~~Ga~FaKWRsVi~i~~~~Ps~~aI~~n 162 (358)
++||+||+|+|+++|||||||||||++||+|++||++|||||||++||++||++|||||||||||+|++++||..+|.+|
T Consensus 84 ~~dG~p~~~~L~~~GIvPgIKVDkGl~pl~G~~~e~~t~GLDgL~eR~~~y~~~Ga~FAKWR~Viki~~~~PS~~aI~~n 163 (341)
T 3bv4_A 84 ADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLVGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMEN 163 (341)
T ss_dssp CTTSCBHHHHHHTTTCEEEEECCCCEEECTTSSSCEEECCCTTHHHHHHHHHHTTCCEEEEEEEECCBTTBSCHHHHHHH
T ss_pred CcCCcCHHHHHHHCCCceEEEcCCCcCcCCCCCCCcCCCChhHHHHHHHHHHhcCCcceeeeeEEecCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCcceeecceecCCCCCChhhHHHHHHHHHHHHHHHhhcCCceeeccccccCCCCCCCCC-CCCCHH
Q 018326 163 ANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEA-PKVTPD 241 (358)
Q Consensus 163 a~~LAryA~icQ~~GLVPIVEPEVl~dgdh~ie~~~~vt~~vl~~v~~~L~~~~V~Leg~lLKpnmv~pG~~~-~~~~~~ 241 (358)
|++|||||+|||++||||||||||||||||||++|++|+++||+++|++|++|+|||||||||||||+||++| .+++++
T Consensus 164 a~~LaryA~icQ~~GLVPIVEPEVl~dg~h~l~~~~~vte~vL~~~~~aL~d~~V~LegtLLKPnMV~pg~~~~~~~~~e 243 (341)
T 3bv4_A 164 ANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHIYLEGTLLKPNMVTPGHACTQKYSHE 243 (341)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEECCCCCCCCTTCSSCCCHH
T ss_pred HHHHHHHHHHHHHcCcceeecceECCCCCCCHHHHHHHHHHHHHHHHHHhcCCeEEecCccCcCccccCCCcccccCCHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999 899999
Q ss_pred HHHHHHHHHhhccCCCCCceEEecCCCCCHHHHHHHHHHhcccCCCCCCeeEEeehhhhcHHHHHHhcCCcccHHHHHHH
Q 018326 242 VIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAA 321 (358)
Q Consensus 242 evA~~Tv~~l~r~vP~aVpgVvFLSGG~s~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~~~l~~W~G~~~nv~~AQ~~ 321 (358)
+||++||++|+|||||+||||||||||||+||||.||||||+++.++||.||||||||||+++||+|+||++|+++||++
T Consensus 244 ~va~~Tv~~l~rtvP~aVpgI~fLSGGqS~eeAt~~LnA~N~~~~~~pw~lsfSygRALq~~~lk~W~Gk~env~aaQ~~ 323 (341)
T 3bv4_A 244 EIAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEE 323 (341)
T ss_dssp HHHHHHHHHHHTTSCTTSCEEEECCTTCCHHHHHHHHHHHHHCCSCCCSEEEEEESHHHHHHHHHHHTTCGGGHHHHHHH
T ss_pred HHHHHHHHHHhhcCCcccCeeeecCCCCCHHHHHHHHHHhhccCCCCCeeEEEEehHHHhHHHHHHhCCChhhHHHHHHH
Confidence 99999999999999999999999999999999999999999987677999999999999999999999999999999999
Q ss_pred HHHHHHhcchhhcCCcc
Q 018326 322 FLVRCKANSEATLGTYK 338 (358)
Q Consensus 322 l~~ra~~n~~A~~G~y~ 338 (358)
|++|||+||+|++|+|.
T Consensus 324 l~~ra~~n~~A~~G~y~ 340 (341)
T 3bv4_A 324 YVKRALANSLACQGKYT 340 (341)
T ss_dssp HHHHHHHHHHHTTTCCC
T ss_pred HHHHHHhhhHHhcCcCC
Confidence 99999999999999996
No 7
>2iqt_A Fructose-bisphosphate aldolase class 1; TIM berrel, structural genomics, PSI-2; 2.46A {Porphyromonas gingivalis}
Probab=100.00 E-value=3.7e-106 Score=770.72 Aligned_cols=261 Identities=29% Similarity=0.380 Sum_probs=247.2
Q ss_pred HHHHHhcCCCCceEee-cCCCCChHHHhhhCCCCCccch--------HhhhhhhhcccCCc-CCceeEEeeccccccccc
Q 018326 14 KNAAYIGTPGKGILAA-DESTGTIGKRLSSINVENVESN--------RRALRELLFCTPGA-LQYLSGVILFEETLYQKT 83 (358)
Q Consensus 14 ~ta~~~~a~gKGiLAa-DES~gt~~Krl~~~Gvente~n--------rr~yR~~l~ttp~~-~~~IsGvILfeETl~q~~ 83 (358)
....+.++|||||||| |||+|||+|||++||||||||| ||+||++|||||+| ++||||||||||||+|+
T Consensus 6 ~~~~~~va~GKGiLAAlDES~gt~~Krl~~iGvente~n~~~e~~~~rr~yR~ll~tsp~~~~~~IsGvILfeeTl~q~- 84 (296)
T 2iqt_A 6 KEQLQQMRQAPGFVGALDQSGGSTPKALKAYGIQPDAYQSEEEMFDLIHQMRTRMITSPAFATGKIIGVILFERTMRGK- 84 (296)
T ss_dssp HHHHHHHHHCCSEEEEECCCGGGHHHHHHHTTCCGGGCCSHHHHHHHHHHHHHHHHHSGGGGSSSEEEEEECHHHHTSE-
T ss_pred HHHHHhcCCCCceEEeecCCCCchHHHHHHcCCCCccccchhhhHHHHHHHhhheecCCCcccCeeeeeeCchhhcCcC-
Confidence 4556788999999977 9999999999999999999999 69999999999998 69999999999999998
Q ss_pred cCCccchHHH-hhCCCcceeecCCcccccc-CCCCCcccCChhhHHHHHHHHhHcCCcceeeeeeeecCCCCchHHHHHH
Q 018326 84 AAGKPFVDVL-KEGGVLPGIKVDKGTVELA-GTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINE 161 (358)
Q Consensus 84 ~~G~~~~~~L-~~~GIvpGIKvDkGl~~l~-~~~ge~~t~GLD~L~~R~~~y~~~Ga~FaKWRsVi~i~~~~Ps~~aI~~ 161 (358)
.||+||+++| +++|||||||||||++||+ |.++|++|||||||++||++|+++| |||||||+|++ ..+|.+
T Consensus 85 ~dG~p~~~~Lw~~kGIvpgIKVDkGl~pl~~G~~~e~~tqGLDgL~eR~~~y~~~G---AKWR~Vlki~~----~~aI~~ 157 (296)
T 2iqt_A 85 IEGMPTADFLWEKRHIVPFLKVDKGLQDEANGVQLMKPFPELGKLCEEAVGYHVFG---TKMRSVIKQAN----EQGIRD 157 (296)
T ss_dssp ETTEEHHHHHHHHHCCEEEEECCCCBCCCBTTEECBCCCTTHHHHHHHHHHTTCCE---EEEEEEECSCC----HHHHHH
T ss_pred CCCeEhHHHHHHhCCCceEEEcCCCccccCCCCCCCccCCChhHHHHHHHHhccCC---CeeeeeeecCc----hhHHHH
Confidence 5999999999 6999999999999999999 8888999999999999999997776 99999999986 799999
Q ss_pred HHHHHHHHHHHHHhCCcceeecceecCCCCCChhhHHHHHHHHHHHHHHHhhcCCceeeccccccCCCCCCCCCCCCCHH
Q 018326 162 NANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAPKVTPD 241 (358)
Q Consensus 162 na~~LAryA~icQ~~GLVPIVEPEVl~dgdh~ie~~~~vt~~vl~~v~~~L~~~~V~Leg~lLKpnmv~pG~~~~~~~~~ 241 (358)
|+++|||||+|||++||||||||||||||+ |+++|++||++||+++|++|++ +||||||| ||++| +++
T Consensus 158 na~~laryA~icq~~GLVPIVEPEVl~dg~-d~~~c~~vte~vL~~v~~aL~~-~V~Legtl-------pg~~~---~~~ 225 (296)
T 2iqt_A 158 IVEQQFQWGKEILSHGLVPILEPEVDIHCP-EKAKAEEILKRELLAQLDKMTE-PVMLKITI-------PTVDN---FYK 225 (296)
T ss_dssp HHHHHHHHHHHHHTTTCEEEEEEEECTTCT-THHHHHHHHHHHHHHHHHHCSS-CEEEEEEC-------CSSTT---TTH
T ss_pred HHHHHHHHHHHHHHcCccceecceECCCCC-CHHHHHHHHHHHHHHHHHHHhh-CcEEeccc-------CCCCC---CHH
Confidence 999999999999999999999999999999 9999999999999999999999 99999999 99998 788
Q ss_pred HHHHHHHHHhhccCCCCCceEEecCCCCCHHHHHHHHHHhcccCCCCCCeeEEeehhhhcHHHHHHhcCCcc
Q 018326 242 VIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEE 313 (358)
Q Consensus 242 evA~~Tv~~l~r~vP~aVpgVvFLSGG~s~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~~~l~~W~G~~~ 313 (358)
+||+ ||+||||||||||||+||||.|||+|| .||||||||||+++ .+|..+.|
T Consensus 226 ~va~----------ppaVpgVvfLSGGqSeeeAt~~L~a~n--------~l~fSfgRALq~~l-~~~q~d~e 278 (296)
T 2iqt_A 226 EIIE----------HPMMLRVVALSGGYSREQANELLSRNH--------GVIASFSRALVEGL-SARQTDAE 278 (296)
T ss_dssp HHHT----------STTEEEEEEECTTCCHHHHHHHHTTST--------TCEEEESHHHHTTC-CTTSCHHH
T ss_pred hhcC----------CCCCCeeeeCCCCCCHHHHHHHHHhcC--------CcEEEeHHHhhChh-hhccCHHH
Confidence 9885 999999999999999999999999988 48999999999995 77887754
No 8
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=97.02 E-value=0.017 Score=56.50 Aligned_cols=245 Identities=19% Similarity=0.230 Sum_probs=137.7
Q ss_pred eEeecCCCCChHHHhhhCCCCC-ccchHhhhhhhhcccCCcCCceeEEeeccccccccccCCccchHHHhhCCCcceeec
Q 018326 26 ILAADESTGTIGKRLSSINVEN-VESNRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKV 104 (358)
Q Consensus 26 iLAaDES~gt~~Krl~~~Gven-te~nrr~yR~~l~ttp~~~~~IsGvILfeETl~q~~~~G~~~~~~L~~~GIvpGIKv 104 (358)
|+|.|+. +++.+-++..|-.. +.+.-..+++++.. .+..+.+||+|.++ +.+... + ....+.|++.++
T Consensus 26 ilA~DHR-~sl~~m~~~~~~~~~~~~~l~~~K~lv~~--~~~~~asaILlD~~-~G~~a~-~----~~~~~~GLii~~-- 94 (332)
T 3iv3_A 26 ALAFDQR-GALKCLMAQYQMKEPTVAQMEELKVLVSE--ELTPYASSILLDPE-YGLPAA-Q----ARDREAGLLLAY-- 94 (332)
T ss_dssp EEEECCS-HHHHHHHHTTTTSCCCHHHHHHHHHHHHH--HHGGGSSEEEECTT-TCHHHH-H----TSCTTCEEEEEC--
T ss_pred EEEcCCh-hHHHHHHHhcCCCCCChHHHHHHHHHHHH--HHhcCCcEEEEchh-hCHHHh-c----cccCCCcEEEEe--
Confidence 3445984 56777788776442 34455777777743 35566777777654 333211 0 111567777655
Q ss_pred CCccccccCCC----CCcccCChhhHHHHHHHHhHcCCcceeeeeeeecCCCCchHHHH-HHHHHHHHHHHHHHHhCCcc
Q 018326 105 DKGTVELAGTN----GETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAI-NENANGLARYAIICQENGLV 179 (358)
Q Consensus 105 DkGl~~l~~~~----ge~~t~GLD~L~~R~~~y~~~Ga~FaKWRsVi~i~~~~Ps~~aI-~~na~~LAryA~icQ~~GLV 179 (358)
++ +|.+ |-.+..=++.=.++++ ++||..-|-=.-+..++. ..| .++-..+.|.+.-|++.|+=
T Consensus 95 E~-----~G~~~~~~gr~p~~l~~~sve~a~---~~GADAVk~lv~~g~d~~----~e~~~~q~~~l~rv~~ec~~~GiP 162 (332)
T 3iv3_A 95 EK-----TGYDANTTSRLPDCLVDWSIKRLK---EAGADAVKFLLYYDVDGD----PQVNVQKQAYIERIGSECQAEDIP 162 (332)
T ss_dssp BC-----CCCCTTSSCCCCCBCTTCCHHHHH---HTTCSEEEEEEEECTTSC----HHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred cc-----CCCCcCCCCCCCccccccCHHHHH---HcCCCEEEEEEEcCCCch----HHHHHHHHHHHHHHHHHHHHcCCc
Confidence 22 1111 1101111222245555 579999887665554432 233 46788999999999999996
Q ss_pred eeecceec---CCCCCChhhHHHHHHHHHHHHHHHhh--cCCceeeccccccCC------CCCCCC-C-CCCCHHHHHHH
Q 018326 180 PIVEPEIL---VDGPHDINKCADVTERVLAACYKALN--DHHVLLEGTLLKPNM------VTPGSE-A-PKVTPDVIAEH 246 (358)
Q Consensus 180 PIVEPEVl---~dgdh~ie~~~~vt~~vl~~v~~~L~--~~~V~Leg~lLKpnm------v~pG~~-~-~~~~~~evA~~ 246 (358)
=++||=.. +.++||.+-. ++-..++....+... +.++++ +|-.+ | .|.. + ..+|-++.+.
T Consensus 163 lllEil~y~~~~~~~~~~~~a-~~~p~~V~~a~R~~~~~elGaDv----~Kve~p~~~~~v-~g~~~~~~~y~~~ea~~- 235 (332)
T 3iv3_A 163 FFLEILTYDETISNNSSVEFA-KVKVHKVNDAMKVFSAERFGIDV----LKVEVPVNMVYV-EGFAEGEVVYSKEEAAQ- 235 (332)
T ss_dssp EEEEEEECBTTBSCTTSHHHH-TTHHHHHHHHHHHHTSGGGCCSE----EEECCSSCGGGB-TTTCSSCCCBCHHHHHH-
T ss_pred eEEEEeccCCCCCCCcchhhh-ccCHHHHHHHHHHHhhcCcCCcE----EEEecCCChhhh-cccccccccccHHHHHH-
Confidence 67776332 2356665443 333444555666663 446543 44432 2 1221 2 3445555432
Q ss_pred HHHHhhccCCCCCceEEecCCCCCHHHHHHHH-HHhcccCCCCCCe--eEEeehhhhcHHHHHHhc
Q 018326 247 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNL-NAMNQLKTKKPWS--LSFSFGRALQQSTLKAWA 309 (358)
Q Consensus 247 Tv~~l~r~vP~aVpgVvFLSGG~s~eeAt~~L-naiN~~~~~~PW~--lsFSfgRALq~~~l~~W~ 309 (358)
+++-+-.. +.|| +||||||-|.++--.-| .||-. + . -.++.||++=++.++.|.
T Consensus 236 ~f~~~~~a--~~~P-~v~lsgG~~~~~fl~~v~~A~~a--G----a~f~Gv~~GRnvwq~~v~~~~ 292 (332)
T 3iv3_A 236 AFREQEAS--TDLP-YIYLSAGVSAELFQETLVFAHKA--G----AKFNGVLCGRATWAGSVQVYM 292 (332)
T ss_dssp HHHHHHHT--CSSC-EEEECTTCCHHHHHHHHHHHHHH--T----CCCCEEEECHHHHTTHHHHHH
T ss_pred HHHHHHhc--CCCC-EEEECCCCCHHHHHHHHHHHHHc--C----CCcceEEeeHHHHHhhhhhhc
Confidence 22222222 2344 67999999988777776 33332 2 2 478999999888777764
No 9
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=81.71 E-value=33 Score=32.47 Aligned_cols=244 Identities=20% Similarity=0.237 Sum_probs=121.3
Q ss_pred HhcC-CCCc-eEeecCCCCChHHHhhhCCCCCccc--hHhhhhhhhcccCCcCCceeEEeecccccccccc-CCccchHH
Q 018326 18 YIGT-PGKG-ILAADESTGTIGKRLSSINVENVES--NRRALRELLFCTPGALQYLSGVILFEETLYQKTA-AGKPFVDV 92 (358)
Q Consensus 18 ~~~a-~gKG-iLAaDES~gt~~Krl~~~Gvente~--nrr~yR~~l~ttp~~~~~IsGvILfeETl~q~~~-~G~~~~~~ 92 (358)
+|+. .|+= |||.|+ ..++-+-|...|-..... .-..+..++. ..+..+.+|+++..+-...... .+. +
T Consensus 10 ri~~~~G~~~ilA~Dh-r~~l~~~~~~~g~~~~~~~~~l~~~k~lv~--~~~~~~~~avl~~~g~~~~a~~~~~~----~ 82 (304)
T 1to3_A 10 DITRASGGFAMLAVDQ-REAMRLMFAAAGAKTPVADSVLTDFKVNAA--KILSPYASAVLLDQQFCYRQAVEQNA----V 82 (304)
T ss_dssp GGSCTTSCEEEEECCC-CHHHHHHHHHTTCCSSCCHHHHHHHHHHHH--HHHGGGCSEEEECTTTTHHHHHHTTC----S
T ss_pred HHhCCCCCEEEEEccC-hhHHHHHHHhcCCCCCcccchhhhHHHHHH--HHHhcCCCEEEeCHHHHHHHhhcccc----c
Confidence 4442 3443 455599 777778888777422211 2244444432 2234557777766554322000 000 1
Q ss_pred HhhCCCcceeecCCccccccCCCCCcccCChhh-HH---HHHHHHhHcCCcceeeeeeeecCCCCchHHHHHHHHHHHHH
Q 018326 93 LKEGGVLPGIKVDKGTVELAGTNGETTTQGLDG-LA---QRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLAR 168 (358)
Q Consensus 93 L~~~GIvpGIKvDkGl~~l~~~~ge~~t~GLD~-L~---~R~~~y~~~Ga~FaKWRsVi~i~~~~Ps~~aI~~na~~LAr 168 (358)
-.+.|++ ||++... |+ . ++. .++ |. .-..+..++||..-|-=..+. ...|. .+.-..+.+
T Consensus 83 ~~~~gli--l~l~~~~-~l--~-~~~----~~~~l~~~~~~ve~a~~~GAdaV~vlv~~~--~d~~~----~~~~~~i~~ 146 (304)
T 1to3_A 83 AKSCAMI--VAADDFI-PG--N-GIP----VDNVVLDKKINAQAVKRDGAKALKLLVLWR--SDEDA----QQRLNMVKE 146 (304)
T ss_dssp CTTSEEE--EECEEEE-EE--T-TEE----EEEEEECSSCCHHHHHHTTCCEEEEEEEEC--TTSCH----HHHHHHHHH
T ss_pred CCCCcEE--EEECCCC-CC--C-CCc----cchhhccCchhHHHHHHcCCCEEEEEEEcC--CCccH----HHHHHHHHH
Confidence 1123333 3444321 22 1 110 011 11 223333467998887433333 22233 677788889
Q ss_pred HHHHHHhCCcceeecceecCCCCCChh-hHHHHHHHHHHHHHHHhhcCCceeeccccccCCCCCCCCCCCCCHHHHHHHH
Q 018326 169 YAIICQENGLVPIVEPEILVDGPHDIN-KCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAPKVTPDVIAEHT 247 (358)
Q Consensus 169 yA~icQ~~GLVPIVEPEVl~dgdh~ie-~~~~vt~~vl~~v~~~L~~~~V~Leg~lLKpnmv~pG~~~~~~~~~evA~~T 247 (358)
....|.+.|+-=||| +..+|.|--+ ... ...+....+...+.|++ ++|-....-+.. +++++....
T Consensus 147 v~~~~~~~G~p~lv~--~~~~g~~v~~~~~~---~~~v~~aa~~a~~lGaD----~iKv~~~~~~~g----~~~~~~~vv 213 (304)
T 1to3_A 147 FNELCHSNGLLSIIE--PVVRPPRCGDKFDR---EQAIIDAAKELGDSGAD----LYKVEMPLYGKG----ARSDLLTAS 213 (304)
T ss_dssp HHHHHHTTTCEEEEE--EEECCCSSCSCCCH---HHHHHHHHHHHTTSSCS----EEEECCGGGGCS----CHHHHHHHH
T ss_pred HHHHHHHcCCcEEEE--EECCCCccccCCCh---hHHHHHHHHHHHHcCCC----EEEeCCCcCCCC----CHHHHHHHH
Confidence 999999999977887 4445544110 000 12222334445566764 445443111111 355544322
Q ss_pred HHHhhccCCCCCceEEecCCCCCHHHHHHHHHHhcccCCCCCCeeEEeehhhhcHHHHH
Q 018326 248 VRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLK 306 (358)
Q Consensus 248 v~~l~r~vP~aVpgVvFLSGG~s~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~~~l~ 306 (358)
+.+... +.+| .|++|||-+.++.-.++...-.. ..-.|..||++-++.++
T Consensus 214 -~~~~~~--~~~P-~Vv~aGG~~~~~~~~~~~~a~~a-----Ga~Gv~vGRaI~q~~~~ 263 (304)
T 1to3_A 214 -QRLNGH--INMP-WVILSSGVDEKLFPRAVRVAMEA-----GASGFLAGRAVWSSVIG 263 (304)
T ss_dssp -HHHHHT--CCSC-EEECCTTSCTTTHHHHHHHHHHT-----TCCEEEESHHHHGGGTT
T ss_pred -Hhcccc--CCCC-eEEEecCCCHHHHHHHHHHHHHc-----CCeEEEEehHHhCcccc
Confidence 211111 1233 47889999987766666654331 25789999999776543
No 10
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=78.91 E-value=24 Score=32.49 Aligned_cols=170 Identities=18% Similarity=0.178 Sum_probs=93.4
Q ss_pred eecCCccccccCCCCCcccCChhhHHHHHHHHhHcCCcceeeeeeeecCCCCchHHHHHHHHHHHHHHHHHHHhCCccee
Q 018326 102 IKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPI 181 (358)
Q Consensus 102 IKvDkGl~~l~~~~ge~~t~GLD~L~~R~~~y~~~Ga~FaKWRsVi~i~~~~Ps~~aI~~na~~LAryA~icQ~~GLVPI 181 (358)
+|++.+.. +|+. .++.-+- ..+.+..+.||..=++|--++ +. +. .+.-+.+.+....|.+.|+-=|
T Consensus 77 v~~~~~~~-~~g~---~~~~~~~---~~ve~Ai~~Ga~~v~~~~nig--~~--~~---~~~~~~~~~v~~~~~~~~~~vI 142 (263)
T 1w8s_A 77 LKLNGKTT-LYNG---EPVSVAN---CSVEEAVSLGASAVGYTIYPG--SG--FE---WKMFEELARIKRDAVKFDLPLV 142 (263)
T ss_dssp EECEECCT-TCCS---SCCCEES---SCHHHHHHTTCSEEEEEECTT--ST--TH---HHHHHHHHHHHHHHHHHTCCEE
T ss_pred EEEeCCCC-cCCC---CccchHH---HHHHHHHHCCCCEEEEEEecC--Cc--CH---HHHHHHHHHHHHHHHHcCCeEE
Confidence 77777662 3321 1333222 233444468999988865444 32 12 5566667777788888886546
Q ss_pred ecceecCCCCCChh--hHHHHHHHHHHHHHHHhhcCCceeeccccccCCCCCCCCCCCCCHHHHHHHHHHHhhccCCCCC
Q 018326 182 VEPEILVDGPHDIN--KCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAPKVTPDVIAEHTVRALQRTMPAAV 259 (358)
Q Consensus 182 VEPEVl~dgdh~ie--~~~~vt~~vl~~v~~~L~~~~V~Leg~lLKpnmv~pG~~~~~~~~~evA~~Tv~~l~r~vP~aV 259 (358)
+| .+.+|.|--+ ....+. ...+...+.|+++ +|.+. |+ +++.+. .+++.+ +.+
T Consensus 143 i~--~~~~G~~~~~~~s~~~i~-----~a~~~a~~~GAD~----vkt~~--~~------~~e~~~-----~~~~~~-~~~ 197 (263)
T 1w8s_A 143 VE--SFPRGGKVVNETAPEIVA-----YAARIALELGADA----MKIKY--TG------DPKTFS-----WAVKVA-GKV 197 (263)
T ss_dssp EE--ECCCSTTCCCTTCHHHHH-----HHHHHHHHHTCSE----EEEEC--CS------SHHHHH-----HHHHHT-TTS
T ss_pred EE--eeCCCCccccCCCHHHHH-----HHHHHHHHcCCCE----EEEcC--CC------CHHHHH-----HHHHhC-CCC
Confidence 65 6678876321 111111 1112222344433 56552 43 345544 344455 335
Q ss_pred ceEEecCCCC---CHHHHHHHHHHhcccCCCCCCeeEEeehhhhcHHHHHHhcCCcccHHHHHHHHHHHH
Q 018326 260 PAVVFLSGGQ---SEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRC 326 (358)
Q Consensus 260 pgVvFLSGG~---s~eeAt~~LnaiN~~~~~~PW~lsFSfgRALq~~~l~~W~G~~~nv~~AQ~~l~~ra 326 (358)
| |..|||- +.+++-+++...-+. + .=..|.||++-++ +|..++-++|...-
T Consensus 198 p--V~asGGi~~~~~~~~l~~i~~~~~a-G----A~GvsvgraI~~~---------~dp~~~~~~l~~~v 251 (263)
T 1w8s_A 198 P--VLMSGGPKTKTEEDFLKQVEGVLEA-G----ALGIAVGRNVWQR---------RDALKFARALAELV 251 (263)
T ss_dssp C--EEEECCSCCSSHHHHHHHHHHHHHT-T----CCEEEESHHHHTS---------TTHHHHHHHHHHHH
T ss_pred e--EEEEeCCCCCCHHHHHHHHHHHHHc-C----CeEEEEehhhcCC---------cCHHHHHHHHHHHH
Confidence 6 6788987 578888888543332 2 1278899987544 46666666665544
No 11
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=71.83 E-value=23 Score=33.57 Aligned_cols=159 Identities=16% Similarity=0.211 Sum_probs=97.0
Q ss_pred hHHHHHHHHHHhcCCC-CceEeecCCCCCh-------HHHhhhCCCCCcc------chHhhhhhhhcccCCcC-CceeEE
Q 018326 8 YADELIKNAAYIGTPG-KGILAADESTGTI-------GKRLSSINVENVE------SNRRALRELLFCTPGAL-QYLSGV 72 (358)
Q Consensus 8 ~~~eL~~ta~~~~a~g-KGiLAaDES~gt~-------~Krl~~~Gvente------~nrr~yR~~l~ttp~~~-~~IsGv 72 (358)
-.+.|.+++++|..-+ .+|-..|=.+|++ .+++..+|++.-. .||.+.++.|...-.++ ++|.-+
T Consensus 27 ~~~~l~~~~~~L~~~~pd~vsVT~~~~g~~r~~t~~~a~~i~~~g~~~i~Hltc~~~~~~~l~~~L~~~~~~GI~niLaL 106 (310)
T 3apt_A 27 GEEALFRTLEELKAFRPAFVSITYGAMGSTRERSVAWAQRIQSLGLNPLAHLTVAGQSRKEVAEVLHRFVESGVENLLAL 106 (310)
T ss_dssp HHHHHHHHHHHHGGGCCSEEEECCCSTTCSHHHHHHHHHHHHHTTCCBCEEEECTTSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred hHHHHHHHHHHHhcCCCCEEEEecCCCCCcchhHHHHHHHHHHhCCCeEEEeecCCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence 3567888999887633 6677778777763 5667778988655 47777777776554444 333221
Q ss_pred eec---c-----ccccccccCCccchHHHhhC-CCcceeecCCccccccCCCCCcccCChhhHHHHHHHHhHcCCcceee
Q 018326 73 ILF---E-----ETLYQKTAAGKPFVDVLKEG-GVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKW 143 (358)
Q Consensus 73 ILf---e-----ETl~q~~~~G~~~~~~L~~~-GIvpGIKvDkGl~~l~~~~ge~~t~GLD~L~~R~~~y~~~Ga~FaKW 143 (358)
==. . ..-.. -.+..-+++++++. |- ....|+.--|+ |..-.+.++...+|+++..+.||.|.==
T Consensus 107 rGD~p~~~g~~~~~~~~-f~~a~~Lv~~ir~~~g~----~f~igvA~yPE--~Hp~~~~~~~d~~~Lk~Kv~aGAdf~iT 179 (310)
T 3apt_A 107 RGDPPRGERVFRPHPEG-FRYAAELVALIRERYGD----RVSVGGAAYPE--GHPESESLEADLRHFKAKVEAGLDFAIT 179 (310)
T ss_dssp CCCCSTTCCSCCCCTTS-CSSHHHHHHHHHHHHGG----GSEEEEEECTT--CCTTSSCHHHHHHHHHHHHHHHCSEEEE
T ss_pred cCCCCCCCCCCCCCCCC-CCCHHHHHHHHHHhCCC----CeEEEEEeCCC--cCCCCCCHHHHHHHHHHHHHcCCCEEEe
Confidence 100 0 00000 12334456667665 41 12334433332 2234566888889999999999987544
Q ss_pred eeeeecCCCCchHHHHHHHHHHHHHHHHHHHhCCc-ceeecceecC
Q 018326 144 RAVLKIGPNEPSQLAINENANGLARYAIICQENGL-VPIVEPEILV 188 (358)
Q Consensus 144 RsVi~i~~~~Ps~~aI~~na~~LAryA~icQ~~GL-VPIVEPEVl~ 188 (358)
..++. ++...+|...|++.|+ |||+ |-|..
T Consensus 180 Q~ffD--------------~~~~~~f~~~~r~~Gi~vPIi-~GImP 210 (310)
T 3apt_A 180 QLFFN--------------NAHYFGFLERARRAGIGIPIL-PGIMP 210 (310)
T ss_dssp CCCSC--------------HHHHHHHHHHHHHTTCCSCEE-CEECC
T ss_pred cccCC--------------HHHHHHHHHHHHHcCCCCeEE-EEecc
Confidence 43332 4567899999999997 7765 78874
No 12
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=70.53 E-value=28 Score=33.12 Aligned_cols=162 Identities=14% Similarity=0.107 Sum_probs=94.2
Q ss_pred CcchhhHHHHHHHHHHhcCCCCce-EeecCCCCCh-------HHHhh-hCCCCCcc------chHhhhhhhhcccCCcC-
Q 018326 3 CFKGKYADELIKNAAYIGTPGKGI-LAADESTGTI-------GKRLS-SINVENVE------SNRRALRELLFCTPGAL- 66 (358)
Q Consensus 3 ~~~~~~~~eL~~ta~~~~a~gKGi-LAaDES~gt~-------~Krl~-~~Gvente------~nrr~yR~~l~ttp~~~- 66 (358)
+...+-.+.|.+++++|..-+--+ -..|-.+|++ .+++. .+|++.-. .||.+.++.|...-.++
T Consensus 32 Pk~~~~~~~l~~~~~~l~~l~p~fvsVT~gagg~~r~~t~~~a~~i~~~~g~~~v~Hltc~~~~~~~l~~~L~~~~~~GI 111 (304)
T 3fst_A 32 PRTSEMEQTLWNSIDRLSSLKPKFVSVTYGANSGERDRTHSIIKGIKDRTGLEAAPHLTCIDATPDELRTIARDYWNNGI 111 (304)
T ss_dssp CCSHHHHHHHHHHHHHHHTTCCSEEEECCCTTSSCHHHHHHHHHHHHHHHCCCEEEEEESTTSCHHHHHHHHHHHHHTTC
T ss_pred CCCccHHHHHHHHHHHHhcCCCCEEEEeeCCCCcchhHHHHHHHHHHHHhCCCeeEEeecCCCCHHHHHHHHHHHHHCCC
Confidence 334444556888999998654444 4448777773 34554 47877544 47777777776554444
Q ss_pred CceeEE---eeccccccccccCCccchHHHhhCCCcceeecCCccccccCCCCCcccCChhhHHHHHHHHhHcCCcceee
Q 018326 67 QYLSGV---ILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKW 143 (358)
Q Consensus 67 ~~IsGv---ILfeETl~q~~~~G~~~~~~L~~~GIvpGIKvDkGl~~l~~~~ge~~t~GLD~L~~R~~~y~~~Ga~FaKW 143 (358)
++|.-+ .--.. .....+..-+++++++.+ +. +-|..-.|+ +..-.+.++...+|+++..+.||.|.-=
T Consensus 112 ~nILaLrGDpp~~~--~~~~~~A~dLv~~ir~~~---~f--~IgvA~yPE--~Hp~a~~~~~d~~~Lk~KvdAGAdf~iT 182 (304)
T 3fst_A 112 RHIVALRGDLPPGS--GKPEMYASDLVTLLKEVA---DF--DISVAAYPE--VHPEAKSAQADLLNLKRKVDAGANRAIT 182 (304)
T ss_dssp CEEEEECCCCC--------CCCHHHHHHHHHHHC---CC--EEEEEECTT--CCTTCSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred CEEEEecCCCCCCC--CCCCCCHHHHHHHHHHcC---CC--eEEEEeCCC--cCCCCCCHHHHHHHHHHHHHcCCCEEEe
Confidence 333311 00000 011234445667776542 22 334444443 2233567888889999999999999332
Q ss_pred eeeeecCCCCchHHHHHHHHHHHHHHHHHHHhCCc-ceeecceecC
Q 018326 144 RAVLKIGPNEPSQLAINENANGLARYAIICQENGL-VPIVEPEILV 188 (358)
Q Consensus 144 RsVi~i~~~~Ps~~aI~~na~~LAryA~icQ~~GL-VPIVEPEVl~ 188 (358)
..++ +++...+|-..|.+.|+ |||+ |-|..
T Consensus 183 Q~ff--------------D~~~~~~f~~~~r~~Gi~vPIi-~GImP 213 (304)
T 3fst_A 183 QFFF--------------DVESYLRFRDRCVSAGIDVEII-PGILP 213 (304)
T ss_dssp CCCS--------------CHHHHHHHHHHHHHTTCCSCEE-CEECC
T ss_pred CccC--------------CHHHHHHHHHHHHhcCCCCcEE-EEecc
Confidence 2222 23567789999999997 7765 78875
No 13
>3sy1_A UPF0001 protein YGGS; engineered protein, structural genomics, PSI-biology, protei structure initiative; HET: MES; 1.47A {Escherichia coli} PDB: 1w8g_A*
Probab=47.41 E-value=1.1e+02 Score=27.89 Aligned_cols=146 Identities=12% Similarity=0.005 Sum_probs=86.9
Q ss_pred HHHhhhCCCCCccchH----hhhhhhhccc--CCcCCceeEEe----------eccccccccccCCccchHHHh----hC
Q 018326 37 GKRLSSINVENVESNR----RALRELLFCT--PGALQYLSGVI----------LFEETLYQKTAAGKPFVDVLK----EG 96 (358)
Q Consensus 37 ~Krl~~~Gvente~nr----r~yR~~l~tt--p~~~~~IsGvI----------LfeETl~q~~~~G~~~~~~L~----~~ 96 (358)
-+.+...|+..=.+|| ..-|+.+... |.+.=++.|-+ .|+- .+ +.|.....+.|. +.
T Consensus 44 i~~~~~~G~~~fgen~vqEa~~kr~~~~~~~~~~i~w~~iG~lq~nk~~~~~~~~~~--i~-sVds~~~a~~l~~~a~~~ 120 (245)
T 3sy1_A 44 IAEAIDAGQRQFSEHYVQEGVDKIRHFQELGVTGLEWNFAGPLQSNKSRLVAEHFDW--CI-TIDRLRIATRLNDQRPAE 120 (245)
T ss_dssp HHHHHHTTCCEEEESSHHHHHHHHHHHHHHTCCSCEEEECSCCCGGGHHHHHHHCSE--EE-EECCHHHHHHHHHHSCTT
T ss_pred HHHHHHcCCCEEEEecHHHHHHHHHhhhhccCCCeEEeecCCCChHHHHHHHHHCCE--EE-ecCCHHHHHHHHHHHHHc
Confidence 4566677887666665 3344444332 23331222222 2221 11 245555556663 22
Q ss_pred C--CcceeecCCccccccCCCCCcccCChhhHHHHHHHHhHcCCcceeeeeeeecCCCCchHHHHHHHHHHHHHHHHHHH
Q 018326 97 G--VLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQ 174 (358)
Q Consensus 97 G--IvpGIKvDkGl~~l~~~~ge~~t~GLD~L~~R~~~y~~~Ga~FaKWRsVi~i~~~~Ps~~aI~~na~~LAryA~icQ 174 (358)
| +=.-||||+|-.. +.-|..+ +.+.+|.+++.+ ...=+++-+..+....+....++.....|.+.....+
T Consensus 121 ~~~~~V~lqVntG~e~--~R~G~~~-ee~~~l~~~i~~-----~~~l~l~Glmt~~~~~~d~~~~~~~f~~l~~l~~~l~ 192 (245)
T 3sy1_A 121 LPPLNVLIQINISDEN--SKSGIQL-AELDELAAAVAE-----LPRLRLRGLSAIPAPESEYVRQFEVARQMAVAFAGLK 192 (245)
T ss_dssp SCCEEEEEEBCCSCTT--CCSSBCG-GGHHHHHHHHTT-----CTTEEEEEEECCCCCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEEECCCCc--CCcCCCH-HHHHHHHHHHHc-----CCCCeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3 3457899999654 3446543 345666665543 3446778888887656667778888889999888888
Q ss_pred hCCcceeecceecCCCCCChhh
Q 018326 175 ENGLVPIVEPEILVDGPHDINK 196 (358)
Q Consensus 175 ~~GLVPIVEPEVl~dgdh~ie~ 196 (358)
+.|. + -+++-|-+.+|.+.
T Consensus 193 ~~~~-~--~~~LSmGmS~d~~~ 211 (245)
T 3sy1_A 193 TRYP-H--IDTLALGQSDDMEA 211 (245)
T ss_dssp TTST-T--CCEEECCCSTTHHH
T ss_pred HhCC-C--CCEEeccCcHhHHH
Confidence 8775 3 36788888888554
No 14
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=44.19 E-value=1.3e+02 Score=26.42 Aligned_cols=61 Identities=13% Similarity=-0.002 Sum_probs=42.8
Q ss_pred ChhhHHHHHHHHhHcCCcceeeeeeeecCCCCchHHHHHHHHHHHHHHHHHHHhCCcceeecc
Q 018326 122 GLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEP 184 (358)
Q Consensus 122 GLD~L~~R~~~y~~~Ga~FaKWRsVi~i~~~~Ps~~aI~~na~~LAryA~icQ~~GLVPIVEP 184 (358)
.++.+.+-+.....+||..-..-+- ...+.+.+.++...++.|.+.+..+++.|+.-.+||
T Consensus 91 ~~~~~~~~i~~A~~lGa~~v~~~~g--~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~ 151 (269)
T 3ngf_A 91 FRDNVDIALHYALALDCRTLHAMSG--ITEGLDRKACEETFIENFRYAADKLAPHGITVLVEP 151 (269)
T ss_dssp HHHHHHHHHHHHHHTTCCEEECCBC--BCTTSCHHHHHHHHHHHHHHHHHHHGGGTCEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCEEEEccC--CCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEee
Confidence 3455555555556788765322111 123346678899999999999999999999999998
No 15
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=40.79 E-value=1.3e+02 Score=26.52 Aligned_cols=94 Identities=9% Similarity=0.084 Sum_probs=55.7
Q ss_pred cchHHHhhCCCcceeecCCcc---ccccCCCCCcccCChhhHHHHHHHHhHcCCcceeeeeeeec------CCCCchHHH
Q 018326 88 PFVDVLKEGGVLPGIKVDKGT---VELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKI------GPNEPSQLA 158 (358)
Q Consensus 88 ~~~~~L~~~GIvpGIKvDkGl---~~l~~~~ge~~t~GLD~L~~R~~~y~~~Ga~FaKWRsVi~i------~~~~Ps~~a 158 (358)
.+.+.|++.|+-+-. + .+. ..+...+.+.....++.+..-+.....+||..-. .++.- ....+.+.+
T Consensus 51 ~~~~~l~~~gl~i~~-~-~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lG~~~v~--~~~~~~~~~~~~~~~~~~~~ 126 (294)
T 3vni_A 51 ELKACAHGNGITLTV-G-HGPSAEQNLSSPDPDIRKNAKAFYTDLLKRLYKLDVHLIG--GALYSYWPIDYTKTIDKKGD 126 (294)
T ss_dssp HHHHHHHHTTCEEEE-E-ECCCGGGCTTCSCHHHHHHHHHHHHHHHHHHHHHTCCEEE--ESTTSCSSCCTTSCCCHHHH
T ss_pred HHHHHHHHcCCeEEE-e-ecCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCeee--ccccCCCCCcCCCCCCHHHH
Confidence 356677788875543 1 011 0111112222233455555555555667876532 12211 112356788
Q ss_pred HHHHHHHHHHHHHHHHhCCcceeecce
Q 018326 159 INENANGLARYAIICQENGLVPIVEPE 185 (358)
Q Consensus 159 I~~na~~LAryA~icQ~~GLVPIVEPE 185 (358)
+...++.|.+.+..+++.|+.-.+||-
T Consensus 127 ~~~~~~~l~~l~~~a~~~Gv~l~lEn~ 153 (294)
T 3vni_A 127 WERSVESVREVAKVAEACGVDFCLEVL 153 (294)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEEEec
Confidence 999999999999999999999999985
No 16
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=36.64 E-value=2.6e+02 Score=25.82 Aligned_cols=131 Identities=17% Similarity=0.156 Sum_probs=69.7
Q ss_pred HHHHhHcCCcceeeeeeeecCCCCchHHHHHHHHHHHHHHHHHHHhCCcceeecceecCCCCCChhhHHHHHHHHHHHHH
Q 018326 130 CQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACY 209 (358)
Q Consensus 130 ~~~y~~~Ga~FaKWRsVi~i~~~~Ps~~aI~~na~~LAryA~icQ~~GLVPIVEPEVl~dgdh~ie~~~~vt~~vl~~v~ 209 (358)
..+..+.||. .|+-+...+|. ..+.++...|.+.|+-++||. |+.++...+.
T Consensus 128 v~~A~~~GAD-----~VlLi~a~l~~--------~~l~~l~~~a~~lGl~~lvev-------~t~ee~~~A~-------- 179 (272)
T 3qja_A 128 IHEARAHGAD-----MLLLIVAALEQ--------SVLVSMLDRTESLGMTALVEV-------HTEQEADRAL-------- 179 (272)
T ss_dssp HHHHHHTTCS-----EEEEEGGGSCH--------HHHHHHHHHHHHTTCEEEEEE-------SSHHHHHHHH--------
T ss_pred HHHHHHcCCC-----EEEEecccCCH--------HHHHHHHHHHHHCCCcEEEEc-------CCHHHHHHHH--------
Confidence 3444467864 45555443341 235566667778999999875 7865443221
Q ss_pred HHhhcCCceeeccccccCCCCCCCCC-CCCCHHHHHHHHHHHhhccCCCCCceEEecCCCCC-HHHHHHHHHHhcccCCC
Q 018326 210 KALNDHHVLLEGTLLKPNMVTPGSEA-PKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQS-EEEATRNLNAMNQLKTK 287 (358)
Q Consensus 210 ~~L~~~~V~Leg~lLKpnmv~pG~~~-~~~~~~evA~~Tv~~l~r~vP~aVpgVvFLSGG~s-~eeAt~~LnaiN~~~~~ 287 (358)
+.|+.+=|+ | +-... ...+.+ ++.-|...+|..+|= .-.||-+ .+++..-+.+ .
T Consensus 180 ----~~Gad~IGv----~---~r~l~~~~~dl~-----~~~~l~~~v~~~~pv--VaegGI~t~edv~~l~~~-G----- 235 (272)
T 3qja_A 180 ----KAGAKVIGV----N---ARDLMTLDVDRD-----CFARIAPGLPSSVIR--IAESGVRGTADLLAYAGA-G----- 235 (272)
T ss_dssp ----HHTCSEEEE----E---SBCTTTCCBCTT-----HHHHHGGGSCTTSEE--EEESCCCSHHHHHHHHHT-T-----
T ss_pred ----HCCCCEEEE----C---CCcccccccCHH-----HHHHHHHhCcccCEE--EEECCCCCHHHHHHHHHc-C-----
Confidence 114443332 1 11001 111222 344566677776653 3367766 7777665553 2
Q ss_pred CCCeeEEeehhhhcHHHHHHhcCCcccHHHHHHHHHH
Q 018326 288 KPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLV 324 (358)
Q Consensus 288 ~PW~lsFSfgRALq~~~l~~W~G~~~nv~~AQ~~l~~ 324 (358)
.=.|--|.||... +|..++-+.|..
T Consensus 236 ---adgvlVGsal~~a---------~dp~~~~~~l~~ 260 (272)
T 3qja_A 236 ---ADAVLVGEGLVTS---------GDPRAAVADLVT 260 (272)
T ss_dssp ---CSEEEECHHHHTC---------SCHHHHHHHHHT
T ss_pred ---CCEEEEcHHHhCC---------CCHHHHHHHHHh
Confidence 2256777777532 466666666654
No 17
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=36.54 E-value=1.5e+02 Score=25.42 Aligned_cols=91 Identities=7% Similarity=-0.003 Sum_probs=55.6
Q ss_pred chHHHhhCCCcce-eecCCccccccCCCCCcccCChhhHHHHHHHHhHcCCcceeeeeeeecCC---CCchHHHHHHHHH
Q 018326 89 FVDVLKEGGVLPG-IKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGP---NEPSQLAINENAN 164 (358)
Q Consensus 89 ~~~~L~~~GIvpG-IKvDkGl~~l~~~~ge~~t~GLD~L~~R~~~y~~~Ga~FaKWRsVi~i~~---~~Ps~~aI~~na~ 164 (358)
+.+.|++.|+-+- +=... .+...+.+.....++.+..-+.....+||..-.. ..+. +.+.+.++...++
T Consensus 51 ~~~~l~~~gl~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~----~~g~~~~~~~~~~~~~~~~~ 123 (278)
T 1i60_A 51 LAEYFQTHHIKPLALNALV---FFNNRDEKGHNEIITEFKGMMETCKTLGVKYVVA----VPLVTEQKIVKEEIKKSSVD 123 (278)
T ss_dssp HHHHHHTSSCEEEEEEEEE---CCSSCCHHHHHHHHHHHHHHHHHHHHHTCCEEEE----ECCBCSSCCCHHHHHHHHHH
T ss_pred HHHHHHHcCCCeeeecccc---ccccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEE----ecCCCCCCCCHHHHHHHHHH
Confidence 5677788887542 32221 1211122222334555555555556788654322 1111 2456888899999
Q ss_pred HHHHHHHHHHhCCcceeeccee
Q 018326 165 GLARYAIICQENGLVPIVEPEI 186 (358)
Q Consensus 165 ~LAryA~icQ~~GLVPIVEPEV 186 (358)
.|.+.+..+++.|+.--+||--
T Consensus 124 ~l~~l~~~a~~~gv~l~lEn~~ 145 (278)
T 1i60_A 124 VLTELSDIAEPYGVKIALEFVG 145 (278)
T ss_dssp HHHHHHHHHGGGTCEEEEECCC
T ss_pred HHHHHHHHHHhcCCEEEEEecC
Confidence 9999999999999999999953
No 18
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=34.46 E-value=1.2e+02 Score=26.23 Aligned_cols=94 Identities=14% Similarity=0.109 Sum_probs=54.9
Q ss_pred cchHHHhhCCCcce-eecCCccccccCCCCCcccCChhhHHHHHHHHhHcCCcceeeeeeeecC-CCCchHHHHHHHHHH
Q 018326 88 PFVDVLKEGGVLPG-IKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIG-PNEPSQLAINENANG 165 (358)
Q Consensus 88 ~~~~~L~~~GIvpG-IKvDkGl~~l~~~~ge~~t~GLD~L~~R~~~y~~~Ga~FaKWRsVi~i~-~~~Ps~~aI~~na~~ 165 (358)
.+.+.|++.|+-+- +=. + ..+...+.+..-..++.+..-+.....+||..-..-+- ... ...+.+.++...++.
T Consensus 49 ~~~~~l~~~gl~~~~~~~--~-~~~~~~d~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~g-~~~~~~~~~~~~~~~~~~~ 124 (275)
T 3qc0_A 49 EAGRIVRANGLKLTGLCR--G-GFFPAPDASGREKAIDDNRRAVDEAAELGADCLVLVAG-GLPGGSKNIDAARRMVVEG 124 (275)
T ss_dssp HHHHHHHHHTCEESCEEE--E-ECCCCSSHHHHHHHHHHHHHHHHHHHHTTCSCEEEECB-CCCTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCceEEeec--C-CCcCCCCHHHHHHHHHHHHHHHHHHHHhCCCEEEEeeC-CCCCCCcCHHHHHHHHHHH
Confidence 35667777776431 111 0 01111122223334566666666666789754322110 011 123567888999999
Q ss_pred HHHHHHHHHhCCcceeecce
Q 018326 166 LARYAIICQENGLVPIVEPE 185 (358)
Q Consensus 166 LAryA~icQ~~GLVPIVEPE 185 (358)
|.+.+.++++.|+.--+||.
T Consensus 125 l~~l~~~a~~~gv~l~lE~~ 144 (275)
T 3qc0_A 125 IAAVLPHARAAGVPLAIEPL 144 (275)
T ss_dssp HHHHHHHHHHHTCCEEECCC
T ss_pred HHHHHHHHHHcCCEEEEeEC
Confidence 99999999999999999983
No 19
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=32.48 E-value=50 Score=28.06 Aligned_cols=83 Identities=18% Similarity=0.231 Sum_probs=60.3
Q ss_pred hhhHHHHHHHHHHhcCC--CCceEeecCCCCChHHHhhh-CCCCCccc------hHhhhhhhhcccCCcCCceeEEeecc
Q 018326 6 GKYADELIKNAAYIGTP--GKGILAADESTGTIGKRLSS-INVENVES------NRRALRELLFCTPGALQYLSGVILFE 76 (358)
Q Consensus 6 ~~~~~eL~~ta~~~~a~--gKGiLAaDES~gt~~Krl~~-~Gvente~------nrr~yR~~l~ttp~~~~~IsGvILfe 76 (358)
...++++...|+++..- |-.|+| ++++++.|+. -||+-+.- .|...-++| -+..|.-||-|.
T Consensus 12 D~dK~~~v~~a~~~~~ll~Gf~l~A----T~gTa~~L~e~~Gl~v~~v~k~~~eG~p~I~d~I-----~~geIdlVInt~ 82 (134)
T 2xw6_A 12 DAKKEEMVAFCQRHREVLARFPLVA----TGTTGRRIEEATGLTVEKLLSGPLGGDQQMGARV-----AEGRILAVIFFR 82 (134)
T ss_dssp GGGHHHHHHHHHHTHHHHTTSCEEE----CHHHHHHHHHHHCCCCEECSCGGGTHHHHHHHHH-----HTTCEEEEEEEC
T ss_pred cccHHHHHHHHHHHHHHhCCCEEEE----ccHHHHHHHHhhCceEEEEEecCCCCcchHHHHH-----HCCCccEEEEcc
Confidence 45789999999999998 999999 8999999998 89886543 333444444 347899999999
Q ss_pred ccc-ccc-ccCCccchHHHhhCC
Q 018326 77 ETL-YQK-TAAGKPFVDVLKEGG 97 (358)
Q Consensus 77 ETl-~q~-~~~G~~~~~~L~~~G 97 (358)
+-+ .|. ..||..+-..--..+
T Consensus 83 ~pl~~~~h~~D~~~IrR~A~~~~ 105 (134)
T 2xw6_A 83 DPLTAQPHEPDVQALLRVCDVHG 105 (134)
T ss_dssp CTTTCCTTSCCSHHHHHHHHHHT
T ss_pred CcccCCCccchHHHHHHHHHHcC
Confidence 822 554 567765544433433
No 20
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=31.16 E-value=1.2e+02 Score=26.56 Aligned_cols=61 Identities=13% Similarity=0.036 Sum_probs=42.0
Q ss_pred cCChhhHHHHHHHHhHcCCcceeeeeeeecCCCCc--hHHHHHHHHHHHHHHHHHHHhCCcceeecce
Q 018326 120 TQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEP--SQLAINENANGLARYAIICQENGLVPIVEPE 185 (358)
Q Consensus 120 t~GLD~L~~R~~~y~~~Ga~FaKWRsVi~i~~~~P--s~~aI~~na~~LAryA~icQ~~GLVPIVEPE 185 (358)
-..++.+.+-+.....+||..-.. ..+. .| ++..+...++.|.+.+.++.+.|+.-.+||-
T Consensus 98 ~~~~~~~~~~i~~a~~lG~~~v~~----~~G~-~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~ 160 (290)
T 3tva_A 98 ASRVAEMKEISDFASWVGCPAIGL----HIGF-VPESSSPDYSELVRVTQDLLTHAANHGQAVHLETG 160 (290)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEE----CCCC-CCCTTSHHHHHHHHHHHHHHHHHHTTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEE----cCCC-CcccchHHHHHHHHHHHHHHHHHHHcCCEEEEecC
Confidence 344666666666666789764322 1121 12 4567888888899999999999999999995
No 21
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=25.86 E-value=2.6e+02 Score=23.98 Aligned_cols=91 Identities=18% Similarity=0.120 Sum_probs=55.2
Q ss_pred chHHHhhCCCcce-eecCCccccccCCCCCcccCChhhHHHHHHHHhHcCCcceeeeeeeecCCCCchHHHHHHHHHHHH
Q 018326 89 FVDVLKEGGVLPG-IKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLA 167 (358)
Q Consensus 89 ~~~~L~~~GIvpG-IKvDkGl~~l~~~~ge~~t~GLD~L~~R~~~y~~~Ga~FaKWRsVi~i~~~~Ps~~aI~~na~~LA 167 (358)
+.+.|++.|+-+- +=... .+. .+.+..-..++.+.+-+.....+||..-. ..+.-+...|....+...++.|.
T Consensus 52 ~~~~l~~~gl~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~i~~A~~lG~~~v~--~~~~p~~~~~~~~~~~~~~~~l~ 125 (281)
T 3u0h_A 52 VEAMFQRRGLVLANLGLPL---NLY-DSEPVFLRELSLLPDRARLCARLGARSVT--AFLWPSMDEEPVRYISQLARRIR 125 (281)
T ss_dssp HHHHHHTTTCEECCEECCS---CTT-SCHHHHHHHHHTHHHHHHHHHHTTCCEEE--EECCSEESSCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCceEEecccc---ccc-CCCHHHHHHHHHHHHHHHHHHHcCCCEEE--EeecCCCCCcchhhHHHHHHHHH
Confidence 5677778876532 21111 111 11122233455655555556678976532 11111122466778899999999
Q ss_pred HHHHHHHhCCcceeecce
Q 018326 168 RYAIICQENGLVPIVEPE 185 (358)
Q Consensus 168 ryA~icQ~~GLVPIVEPE 185 (358)
+.+..+++.|+.--+||-
T Consensus 126 ~l~~~a~~~Gv~l~lE~~ 143 (281)
T 3u0h_A 126 QVAVELLPLGMRVGLEYV 143 (281)
T ss_dssp HHHHHHGGGTCEEEEECC
T ss_pred HHHHHHHHcCCEEEEEec
Confidence 999999999999999985
No 22
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=25.19 E-value=32 Score=30.74 Aligned_cols=29 Identities=28% Similarity=0.595 Sum_probs=23.5
Q ss_pred EecCCCCCHHHHHHHHHHhcccCCCCCCeeEEeeh
Q 018326 263 VFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFG 297 (358)
Q Consensus 263 vFLSGG~s~eeAt~~LnaiN~~~~~~PW~lsFSfg 297 (358)
+||+||.+.|....-+...+ ||++-.|=|
T Consensus 154 ~~LAGGL~peNV~~ai~~~~------p~gVDvsSG 182 (205)
T 1nsj_A 154 LVLSGGLNPENVRSAIDVVR------PFAVDVSSG 182 (205)
T ss_dssp EEEESSCCTTTHHHHHHHHC------CSEEEESGG
T ss_pred EEEECCCCHHHHHHHHHhcC------CCEEEECCc
Confidence 79999999998777666543 899988855
No 23
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=23.58 E-value=3.5e+02 Score=24.04 Aligned_cols=91 Identities=10% Similarity=0.069 Sum_probs=54.4
Q ss_pred chHHHhhCCCcceeecCCcc---ccccCCCCCcccCChhhHHHHHHHHhHcCCcceeeeeeeec----CC---CC-chHH
Q 018326 89 FVDVLKEGGVLPGIKVDKGT---VELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKI----GP---NE-PSQL 157 (358)
Q Consensus 89 ~~~~L~~~GIvpGIKvDkGl---~~l~~~~ge~~t~GLD~L~~R~~~y~~~Ga~FaKWRsVi~i----~~---~~-Ps~~ 157 (358)
+.+.|++.|+-+-. . .+. ..+...+.+.....++.+..-+.....+||.+-. ... +. .. +.+.
T Consensus 71 l~~~l~~~gl~i~~-~-~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~----~~~~~~~g~~~~~~~~~~~ 144 (309)
T 2hk0_A 71 IRKSAKDNGIILTA-G-IGPSKTKNLSSEDAAVRAAGKAFFERTLSNVAKLDIHTIG----GALHSYWPIDYSQPVDKAG 144 (309)
T ss_dssp HHHHHHHTTCEEEE-E-CCCCSSSCSSCSCHHHHHHHHHHHHHHHHHHHHTTCCEEE----ECTTSCSSCCTTSCCCHHH
T ss_pred HHHHHHHcCCeEEE-e-cCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEE----eeccccccccCCCcCChHH
Confidence 55677888876544 2 111 1111111122223345555555555678976542 111 11 12 5678
Q ss_pred HHHHHHHHHHHHHHHHHhCCcceeecce
Q 018326 158 AINENANGLARYAIICQENGLVPIVEPE 185 (358)
Q Consensus 158 aI~~na~~LAryA~icQ~~GLVPIVEPE 185 (358)
++...++.|.+.+..+++.|+.-.+||-
T Consensus 145 ~~~~~~~~l~~l~~~a~~~gv~l~lEn~ 172 (309)
T 2hk0_A 145 DYARGVEGINGIADFANDLGINLCIEVL 172 (309)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHcCCEEEEeec
Confidence 8888899999999999999999999994
No 24
>3bil_A Probable LACI-family transcriptional regulator; structural genomics, unknown function, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum atcc 13032}
Probab=23.04 E-value=4.2e+02 Score=23.89 Aligned_cols=164 Identities=11% Similarity=0.118 Sum_probs=89.2
Q ss_pred CceeEEeeccccccccccCCccchHHHhhCCCcceeecCCccccccCCCCCcccCChhhH--HHHHH-HHhHcCCcceee
Q 018326 67 QYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGL--AQRCQ-KYYEAGARFAKW 143 (358)
Q Consensus 67 ~~IsGvILfeETl~q~~~~G~~~~~~L~~~GIvpGIKvDkGl~~l~~~~ge~~t~GLD~L--~~R~~-~y~~~Ga~FaKW 143 (358)
..+-|+|++.-... .+..+.|.+.|| |-|=+|..... .++ ...-+.|+- ...+. ...+.|.
T Consensus 121 ~~vdgiI~~~~~~~------~~~~~~l~~~~i-PvV~i~~~~~~---~~~-~~~V~~D~~~~~~~a~~~L~~~G~----- 184 (348)
T 3bil_A 121 HGVDGIICVPNEEC------ANQLEDLQKQGM-PVVLVDRELPG---DST-IPTATSNPQPGIAAAVELLAHNNA----- 184 (348)
T ss_dssp TTCSCEEECCCGGG------HHHHHHHHHC-C-CEEEESSCCSC---C-C-CCEEEEECHHHHHHHHHHHHHTTC-----
T ss_pred CCCCEEEEeCCCCC------hHHHHHHHhCCC-CEEEEcccCCC---CCC-CCEEEeChHHHHHHHHHHHHHCCC-----
Confidence 56789998753322 145567777774 67777764321 011 122333332 12233 3345664
Q ss_pred eeeeecCCCCchHHHHHHHHHHHHHHHHHHHhCCcceeecceecCCCCCChhhHHHHHHHHHHH---------------H
Q 018326 144 RAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAA---------------C 208 (358)
Q Consensus 144 RsVi~i~~~~Ps~~aI~~na~~LAryA~icQ~~GLVPIVEPEVl~dgdh~ie~~~~vt~~vl~~---------------v 208 (358)
|.+.-|... +... ....-+.-|-..++++|+ +|++...++.+.+...+..+.+|.. +
T Consensus 185 ~~I~~i~~~-~~~~---~~~~R~~Gf~~al~~~g~----~~~~v~~~~~~~~~~~~~~~~ll~~~~~ai~~~nD~~A~g~ 256 (348)
T 3bil_A 185 LPIGYLSGP-MDTS---TGRERLEDFKAACANSKI----GEQLVFLGGYEQSVGFEGATKLLDQGAKTLFAGDSMMTIGV 256 (348)
T ss_dssp CSEEEECCC-TTSH---HHHHHHHHHHHHHHHTTC----CCCEEECCCSSHHHHHHHHHHHHHTTCSEEEESSHHHHHHH
T ss_pred CeEEEEeCC-CCCc---cHHHHHHHHHHHHHHcCc----CccEEEcCCCCHHHHHHHHHHHHcCCCCEEEEcChHHHHHH
Confidence 344444421 1111 122345567777889997 5666667888888877777777652 5
Q ss_pred HHHhhcCCceeec---------cccccCCCCCCCCCCCCCHHHHHHHHHHHhhccC
Q 018326 209 YKALNDHHVLLEG---------TLLKPNMVTPGSEAPKVTPDVIAEHTVRALQRTM 255 (358)
Q Consensus 209 ~~~L~~~~V~Leg---------~lLKpnmv~pG~~~~~~~~~evA~~Tv~~l~r~v 255 (358)
+++|.++|+-... +-+ ..++.|........+++++...+..|.+.+
T Consensus 257 ~~al~~~G~~vP~disvvG~D~~~~-~~~~~p~lttv~~~~~~~g~~Av~~l~~~i 311 (348)
T 3bil_A 257 IEACHKAGLVIGKDVSVIGFDTHPL-FALQPHPLTVIDQNVEQLAQRAVSILTELI 311 (348)
T ss_dssp HHHHHHTTCCBTTTBEEEEESCCGG-GGGSSSCCCEEECCHHHHHHHHHHHHHCC-
T ss_pred HHHHHHcCCCCCCCeEEEEeCCcHH-HHhcCCCceEEEcCHHHHHHHHHHHHHHHh
Confidence 6777777654321 111 233445554434467888888888887653
No 25
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=22.80 E-value=3.2e+02 Score=23.78 Aligned_cols=112 Identities=15% Similarity=0.118 Sum_probs=67.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHhCCcceeec---ceec--------CCC--CCChhhHHHHHHHHHHHHHHHhh-cCCcee
Q 018326 154 PSQLAINENANGLARYAIICQENGLVPIVE---PEIL--------VDG--PHDINKCADVTERVLAACYKALN-DHHVLL 219 (358)
Q Consensus 154 Ps~~aI~~na~~LAryA~icQ~~GLVPIVE---PEVl--------~dg--dh~ie~~~~vt~~vl~~v~~~L~-~~~V~L 219 (358)
+-+..+..|..........|.++|.=.||= -.+. ++. .......+..++.....+.+.+. +++ +
T Consensus 79 ~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~~~g--~ 156 (267)
T 3rft_A 79 PFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYFDKFG--Q 156 (267)
T ss_dssp CHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC--C
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHhC--C
Confidence 556788899999888888888888434432 1111 000 01111344455444444554443 233 4
Q ss_pred eccccccCCCCCCCCC-C----CCCHHHHHHHHHHHhhccCCCCCceEEecCCCC
Q 018326 220 EGTLLKPNMVTPGSEA-P----KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQ 269 (358)
Q Consensus 220 eg~lLKpnmv~pG~~~-~----~~~~~evA~~Tv~~l~r~vP~aVpgVvFLSGG~ 269 (358)
+.+++.|+.|.|+... . -.++++++..-.+++.. +..-..|+|+.++.
T Consensus 157 ~~~~vr~~~v~~~~~~~~~~~~~~~~~d~a~~~~~~~~~--~~~~~~~~~~~s~~ 209 (267)
T 3rft_A 157 ETALVRIGSCTPEPNNYRMLSTWFSHDDFVSLIEAVFRA--PVLGCPVVWGASAN 209 (267)
T ss_dssp CEEEEEECBCSSSCCSTTHHHHBCCHHHHHHHHHHHHHC--SCCCSCEEEECCCC
T ss_pred eEEEEEeecccCCCCCCCceeeEEcHHHHHHHHHHHHhC--CCCCceEEEEeCCC
Confidence 5678999999887654 1 24789999887777753 22234688887665
No 26
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=21.67 E-value=64 Score=26.93 Aligned_cols=65 Identities=15% Similarity=0.191 Sum_probs=45.2
Q ss_pred hhhHHHHHHHHHHhcCCCCceEeecCCCCChHHHhhhCCCCCccch------H----hhhhhhhcccCCcCCceeEEeec
Q 018326 6 GKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESN------R----RALRELLFCTPGALQYLSGVILF 75 (358)
Q Consensus 6 ~~~~~eL~~ta~~~~a~gKGiLAaDES~gt~~Krl~~~Gvente~n------r----r~yR~~l~ttp~~~~~IsGvILf 75 (358)
...++++...|+++..-|--|+|. +.+.+.|+..||+-+.-+ | ...+++| -+..|.-||-+
T Consensus 33 d~dK~~l~~~a~~l~~lGf~i~AT----~GTa~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i-----~~g~i~lVInt 103 (143)
T 2yvq_A 33 QSFRPRFLGVAEQLHNEGFKLFAT----EATSDWLNANNVPATPVAWPSQEGQNPSLSSIRKLI-----RDGSIDLVINL 103 (143)
T ss_dssp GGGHHHHHHHHHHHHTTTCEEEEE----HHHHHHHHHTTCCCEEECCGGGC-----CBCHHHHH-----HTTSCCEEEEC
T ss_pred ccchHHHHHHHHHHHHCCCEEEEC----chHHHHHHHcCCeEEEEEeccCCCcccccccHHHHH-----HCCCceEEEEC
Confidence 356889999999999999988984 466899999999876532 2 2333333 22456677766
Q ss_pred cccc
Q 018326 76 EETL 79 (358)
Q Consensus 76 eETl 79 (358)
.+..
T Consensus 104 ~~~~ 107 (143)
T 2yvq_A 104 PNNN 107 (143)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 6543
No 27
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=21.41 E-value=64 Score=27.97 Aligned_cols=84 Identities=14% Similarity=0.119 Sum_probs=59.1
Q ss_pred hhhHHHHHHHHHHhcCC--CCceEeecCCCCChHHHhhh-CCCCCccch------HhhhhhhhcccCCcCCceeEEeecc
Q 018326 6 GKYADELIKNAAYIGTP--GKGILAADESTGTIGKRLSS-INVENVESN------RRALRELLFCTPGALQYLSGVILFE 76 (358)
Q Consensus 6 ~~~~~eL~~ta~~~~a~--gKGiLAaDES~gt~~Krl~~-~Gvente~n------rr~yR~~l~ttp~~~~~IsGvILfe 76 (358)
...++++...|+++..- |-.|+| ++++++.|+. -||+-+.-+ |.+.-++| -+..|.-||-|.
T Consensus 20 D~dK~~~v~~ak~~~~ll~Gf~l~A----T~gTa~~L~e~~Gl~v~~v~k~~eGG~p~I~d~I-----~~geIdlVInt~ 90 (152)
T 1b93_A 20 DHCKQMLMSWVERHQPLLEQHVLYA----TGTTGNLISRATGMNVNAMLSGPMGGDQQVGALI-----SEGKIDVLIFFW 90 (152)
T ss_dssp GGGHHHHHHHHHHTHHHHTTSEEEE----ETTHHHHHHHHHCCCCEEECCGGGTHHHHHHHHH-----HTTCCCEEEEEC
T ss_pred hhhHHHHHHHHHHHHHHhCCCEEEE----ccHHHHHHHHHhCceeEEEEecCCCCCchHHHHH-----HCCCccEEEEcC
Confidence 45789999999999998 999999 8999999999 999875443 33344444 347899999999
Q ss_pred ccc-ccc-ccCCccchHHHhhCCC
Q 018326 77 ETL-YQK-TAAGKPFVDVLKEGGV 98 (358)
Q Consensus 77 ETl-~q~-~~~G~~~~~~L~~~GI 98 (358)
+-| .|. ..||..+-..--..+|
T Consensus 91 ~pl~~~~h~~D~~~IrR~A~~~~I 114 (152)
T 1b93_A 91 DPLNAVPHDPDVKALLRLATVWNI 114 (152)
T ss_dssp CTTSCCTTHHHHHHHHHHHHHTTC
T ss_pred CcccCCcccccHHHHHHHHHHcCC
Confidence 832 443 3565544433334443
No 28
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=21.31 E-value=42 Score=29.97 Aligned_cols=29 Identities=34% Similarity=0.627 Sum_probs=23.0
Q ss_pred EecCCCCCHHHHHHHHHHhcccCCCCCCeeEEeehh
Q 018326 263 VFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGR 298 (358)
Q Consensus 263 vFLSGG~s~eeAt~~LnaiN~~~~~~PW~lsFSfgR 298 (358)
+||+||.+.|....-+ ..+ ||++-.|=|=
T Consensus 149 ~~LAGGL~peNV~~ai-~~~------p~gVDvsSGv 177 (203)
T 1v5x_A 149 VILAGGIAPENLEEVL-ALR------PYALDLASGV 177 (203)
T ss_dssp EEECSSCCSTTHHHHH-HHC------CSEEEESGGG
T ss_pred EEEECCCCHHHHHHHH-hcC------CCEEEeCCce
Confidence 7999999999877666 543 8999888553
No 29
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=21.03 E-value=5.2e+02 Score=24.25 Aligned_cols=189 Identities=13% Similarity=0.122 Sum_probs=93.4
Q ss_pred ceeEEeeccccccccccCCccchHHHhhCCCcceeecCCccccccCCCCCcccCChhhHHHHHHHHhHcCCcceeeeeee
Q 018326 68 YLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVL 147 (358)
Q Consensus 68 ~IsGvILfeETl~q~~~~G~~~~~~L~~~GIvpGIKvDkGl~~l~~~~ge~~t~GLD~L~~R~~~y~~~Ga~FaKWRsVi 147 (358)
+..+|++.-=.+.+.. . .+ . ++---+|++-+..-++..+.+..+.. +.+-.+.||..-..+ +
T Consensus 85 g~dav~~~~G~~~~~~-~-----~~-~--~~~lil~l~~~t~~~~~~~~~~l~~~-------ve~Av~~GAdaV~~~--i 146 (295)
T 3glc_A 85 HADVLMCTRGILRSVV-P-----PA-T--NRPVVLRASGANSILAELSNEAVALS-------MDDAVRLNSCAVAAQ--V 146 (295)
T ss_dssp GCSEEEECHHHHHHHS-C-----GG-G--CCCEEEECEECCCTTSCTTCCEECSC-------HHHHHHTTCSEEEEE--E
T ss_pred CCCEEEECHhHHhhhc-c-----cc-C--CccEEEEEcCCCcCCCCCccchhHHH-------HHHHHHCCCCEEEEE--E
Confidence 4677777654444321 1 11 1 33345778776543333333333332 333346898876664 4
Q ss_pred ecCCCCchHHHHHHHHHHHHHHHHHHHhCCcceeecceecCCCCCChhhHHHHHHHHHHHHHHHhhcCCceeeccccccC
Q 018326 148 KIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPN 227 (358)
Q Consensus 148 ~i~~~~Ps~~aI~~na~~LAryA~icQ~~GLVPIVEPEVl~dgdh~ie~~~~vt~~vl~~v~~~L~~~~V~Leg~lLKpn 227 (358)
.++++ .. .+..+.+++....|.+.|+.=|+|+ ..|.|-......+. ...+.-.+.|.+ ++|.+
T Consensus 147 ~~Gs~--~~---~~~l~~i~~v~~~a~~~GlpvIie~---~~G~~~~~d~e~i~-----~aariA~elGAD----~VKt~ 209 (295)
T 3glc_A 147 YIGSE--YE---HQSIKNIIQLVDAGMKVGMPTMAVT---GVGKDMVRDQRYFS-----LATRIAAEMGAQ----IIKTY 209 (295)
T ss_dssp CTTST--TH---HHHHHHHHHHHHHHHTTTCCEEEEE---CC----CCSHHHHH-----HHHHHHHHTTCS----EEEEE
T ss_pred ECCCC--cH---HHHHHHHHHHHHHHHHcCCEEEEEC---CCCCccCCCHHHHH-----HHHHHHHHhCCC----EEEeC
Confidence 44432 12 3455567777888999998777776 34544221111111 111112234443 46666
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHhhccCCCCCceEEecCCCCC--HHHHHHHH-HHhcccCCCCCCeeEEeehhhhcHHH
Q 018326 228 MVTPGSEAPKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQS--EEEATRNL-NAMNQLKTKKPWSLSFSFGRALQQST 304 (358)
Q Consensus 228 mv~pG~~~~~~~~~evA~~Tv~~l~r~vP~aVpgVvFLSGG~s--~eeAt~~L-naiN~~~~~~PW~lsFSfgRALq~~~ 304 (358)
+ + + + +.++|.. .. .+| | ..|||-+ .+++-.++ .+|.. + .-..++||++-++
T Consensus 210 ~-t-~-e----~~~~vv~--------~~--~vP-V-v~~GG~~~~~~~~l~~v~~ai~a--G----A~Gv~vGRnI~q~- 263 (295)
T 3glc_A 210 Y-V-E-K----GFERIVA--------GC--PVP-I-VIAGGKKLPEREALEMCWQAIDQ--G----ASGVDMGRNIFQS- 263 (295)
T ss_dssp C-C-T-T----THHHHHH--------TC--SSC-E-EEECCSCCCHHHHHHHHHHHHHT--T----CSEEEESHHHHTS-
T ss_pred C-C-H-H----HHHHHHH--------hC--CCc-E-EEEECCCCCHHHHHHHHHHHHHh--C----CeEEEeHHHHhcC-
Confidence 2 2 2 1 2344432 22 255 3 4688864 55666666 33332 2 3378899988655
Q ss_pred HHHhcCCcccHHHHHHHHHHH
Q 018326 305 LKAWAGKEENVQKAQAAFLVR 325 (358)
Q Consensus 305 l~~W~G~~~nv~~AQ~~l~~r 325 (358)
+|..++-++|..-
T Consensus 264 --------~dp~~~~~al~~i 276 (295)
T 3glc_A 264 --------DHPVAMMKAVQAV 276 (295)
T ss_dssp --------SSHHHHHHHHHHH
T ss_pred --------cCHHHHHHHHHHH
Confidence 3555555555443
No 30
>3ijd_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein structure initiative; HET: C2F; 2.00A {Clostridium thermocellum atcc 27405}
Probab=21.02 E-value=1.2e+02 Score=28.99 Aligned_cols=56 Identities=20% Similarity=0.223 Sum_probs=39.7
Q ss_pred ChhhHHHHHHHHhHcCCcceeeeeeeecCCCCchHHHHHHHHHHHH-HHHHHHHhCCc--ceeecceecCC
Q 018326 122 GLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLA-RYAIICQENGL--VPIVEPEILVD 189 (358)
Q Consensus 122 GLD~L~~R~~~y~~~Ga~FaKWRsVi~i~~~~Ps~~aI~~na~~LA-ryA~icQ~~GL--VPIVEPEVl~d 189 (358)
.++.-.+|+++..+.||.|.==..++... .-..+. +|+.-|.+.|+ |||| |-|++=
T Consensus 163 ~~~~d~~~Lk~KvdAGAdf~ITQ~ffD~e-----------~~~~f~~~~~~~~r~~Gi~~vPIi-pGImPi 221 (315)
T 3ijd_A 163 KNTDEHLRIIDKINKGCKYFITQAVYNVE-----------AAKDFLSDYYYYSKNNNLKMVPII-FTLTPC 221 (315)
T ss_dssp HHSCHHHHHHHHHHTTCCEEEESCCCCHH-----------HHHHHHHHHHHHHHHTTBCCCCEE-EEECCC
T ss_pred CHHHHHHHHHHHHHCCCCEEEccccCCHH-----------HHHHHHHHHHHHHHHCCCCCCcEE-EEeeec
Confidence 35566789999999999997666655421 112222 45578999999 9998 999763
No 31
>1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=20.87 E-value=1.5e+02 Score=26.09 Aligned_cols=48 Identities=13% Similarity=0.041 Sum_probs=32.7
Q ss_pred HHHHHHHhCCcceeecceecCCCCCChhhHHHHHHHHHHHHHHHhhcCC
Q 018326 168 RYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHH 216 (358)
Q Consensus 168 ryA~icQ~~GLVPIVEPEVl~dgdh~ie~~~~vt~~vl~~v~~~L~~~~ 216 (358)
+++...++.|.+|+ +=.+..+|.|+...-.......|.-+++.|+.|+
T Consensus 230 ~~~~~L~~~g~~~~-~~~~~~~g~H~~~~w~~~l~~~l~~~~~~~~~~~ 277 (280)
T 1r88_A 230 MFYNQYRSVGGHNG-HFDFPASGDNGWGSWAPQLGAMSGDIVGAIRHHH 277 (280)
T ss_dssp HHHHHHHHTTCCSE-EEECCSSCCSSHHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHCCCcce-EEEecCCCCcChhHHHHHHHHHHHHHHHHHhhhc
Confidence 44455667884443 3344468899988878888889999999998664
No 32
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=20.42 E-value=4.5e+02 Score=23.31 Aligned_cols=31 Identities=10% Similarity=0.002 Sum_probs=26.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHhCCcceeecce
Q 018326 155 SQLAINENANGLARYAIICQENGLVPIVEPE 185 (358)
Q Consensus 155 s~~aI~~na~~LAryA~icQ~~GLVPIVEPE 185 (358)
++.++...++.|.+.+.++++.|+.-.+||-
T Consensus 151 ~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~ 181 (340)
T 2zds_A 151 IERGYQDFADRWNPILDVFDAEGVRFAHEVH 181 (340)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCEEEEECC
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCCEEEEEcC
Confidence 4667888888999999999999999999993
No 33
>1pya_A Pyruvoyl-dependent histidine decarboxylase (L- histidine carboxylase); carboxy-lyase; 2.50A {Lactobacillus SP} SCOP: d.155.1.1 PDB: 1hq6_A 1ibv_A* 1ibu_A 1ibt_A* 1ibw_A*
Probab=20.24 E-value=38 Score=26.86 Aligned_cols=30 Identities=27% Similarity=0.490 Sum_probs=21.6
Q ss_pred hCCCcceeecCCccccccCCCCCcccCChhhHHHHHHHHh
Q 018326 95 EGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYY 134 (358)
Q Consensus 95 ~~GIvpGIKvDkGl~~l~~~~ge~~t~GLD~L~~R~~~y~ 134 (358)
-.|.|.++|||.|.++. ++ |.++++...|-
T Consensus 34 G~GYvs~lkv~~G~~~~--~d--------d~~ld~ivsyD 63 (81)
T 1pya_A 34 GNGYVTGLKVDAGVRDK--SD--------DDVLDGIVSYD 63 (81)
T ss_dssp SSCEEECCEEEEEEEEC--CS--------CHHHHHHHHHH
T ss_pred ccceEEEEEEeeceeec--cc--------chhhhhhhhcc
Confidence 36999999999999984 22 45555555553
No 34
>4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A*
Probab=20.16 E-value=1.1e+02 Score=28.84 Aligned_cols=58 Identities=26% Similarity=0.319 Sum_probs=43.4
Q ss_pred CC-ccchHHHhhCCCcceeecCCccccccCCCCCcccCChhhHHHHHHHHhHcCCcceeeeee
Q 018326 85 AG-KPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAV 146 (358)
Q Consensus 85 ~G-~~~~~~L~~~GIvpGIKvDkGl~~l~~~~ge~~t~GLD~L~~R~~~y~~~Ga~FaKWRsV 146 (358)
+| ++++++++++|+-+||=.|-|.....+.+|- .++-...-++.|.+-|..|=|+-..
T Consensus 83 ~G~k~ladyih~~Glk~Giy~~~~~~~c~g~~~~----~~~~~~~da~~~a~wGvdylK~D~~ 141 (400)
T 4do4_A 83 HGIPFLADYVHSLGLKLGIYADMGNFTCMGYPGT----TLDKVVQDAQTFAEWKVDMLKLDGC 141 (400)
T ss_dssp TCHHHHHHHHHHTTCEEEEEEEBSSBCTTSCBCB----CGGGHHHHHHHHHHTTCCEEEEECT
T ss_pred cccHHHHHHHHHCCceEEEecCCCCcccCCCCch----hHhHHHHHHHHHHHhCCceEeeccC
Confidence 44 4789999999999999999988775554431 2455555677888899999887643
No 35
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=20.06 E-value=2.8e+02 Score=20.85 Aligned_cols=33 Identities=12% Similarity=0.248 Sum_probs=20.6
Q ss_pred HHHHhhccCCCCCceEEecCCCCCHHHHHHHHHH
Q 018326 247 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNA 280 (358)
Q Consensus 247 Tv~~l~r~vP~aVpgVvFLSGG~s~eeAt~~Lna 280 (358)
.++.|++..++.+ .|+++|+-.+.+....-+.+
T Consensus 70 ~~~~lr~~~~~~~-~ii~lt~~~~~~~~~~~~~~ 102 (133)
T 2r25_B 70 STKMIRRDLGYTS-PIVALTAFADDSNIKECLES 102 (133)
T ss_dssp HHHHHHHHSCCCS-CEEEEESCCSHHHHHHHHHT
T ss_pred HHHHHHhhcCCCC-CEEEEECCCCHHHHHHHHHc
Confidence 3455665445555 48889988777666555543
Done!