Query 018328
Match_columns 358
No_of_seqs 136 out of 160
Neff 3.8
Searched_HMMs 29240
Date Mon Mar 25 13:33:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018328.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018328hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qg8_A Protein (spore coat pol 85.0 1.4 4.9E-05 37.7 5.8 119 134-275 87-215 (255)
2 1xhb_A Polypeptide N-acetylgal 82.8 1.2 4.1E-05 42.8 4.8 140 133-278 112-262 (472)
3 2ffu_A Ppgalnact-2, polypeptid 80.0 1.8 6.3E-05 42.1 5.0 208 58-275 65-291 (501)
4 2z86_A Chondroitin synthase; G 70.5 3 0.0001 41.5 3.8 216 59-279 93-335 (625)
5 2d7i_A Polypeptide N-acetylgal 65.5 16 0.00056 36.5 8.0 213 58-277 111-341 (570)
6 3bcv_A Putative glycosyltransf 62.6 5.3 0.00018 33.7 3.3 108 59-171 5-120 (240)
7 4fix_A UDP-galactofuranosyl tr 59.6 7.2 0.00025 40.4 4.3 37 135-171 268-305 (657)
8 4hg6_A Cellulose synthase subu 36.1 34 0.0012 36.0 4.9 127 134-275 237-369 (802)
9 2bo4_A Mannosylglycerate synth 35.9 23 0.00078 34.7 3.4 182 61-267 2-210 (397)
10 2z86_A Chondroitin synthase; G 32.6 50 0.0017 32.6 5.3 108 58-170 374-490 (625)
11 2c0n_A A197; thermophil protei 32.2 16 0.00053 33.7 1.4 31 134-168 52-85 (203)
12 1omz_A Alpha-1,4-N-acetylhexos 27.5 28 0.00095 33.3 2.3 103 59-163 28-134 (293)
13 2nxv_A ATP synthase subunits r 24.0 59 0.002 28.4 3.6 29 134-162 73-101 (249)
14 3l7i_A Teichoic acid biosynthe 21.5 20 0.00067 36.8 0.0 36 134-169 82-117 (729)
No 1
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=85.00 E-value=1.4 Score=37.71 Aligned_cols=119 Identities=8% Similarity=-0.076 Sum_probs=67.7
Q ss_pred ccccEEEEecccccCCCCCHHHHHHHHHHh-CCcccCCCC-----CCCCCcccccccccccCcccceeeecccCCCCCCC
Q 018328 134 AEYNYIFLWDEDIGVENFNPRRYLSIVKDE-GLEISQPAL-----DPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDD 207 (358)
Q Consensus 134 ~~YdYIflwDdDL~vd~f~i~ry~~Ivr~~-gLeISQPAL-----d~~s~~i~h~iT~R~~~~~vHr~~~~~~~~~~C~~ 207 (358)
+..|||++.|+|..++...+.++++.+.++ +..+..+.. +.+.. ..+.. . .+...+. .
T Consensus 87 a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~-~-~~~~~~~----------~--- 150 (255)
T 1qg8_A 87 AEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRD-IVKET-V-RPAAQVT----------W--- 150 (255)
T ss_dssp CCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---C-EEEEE-E-ECCCSCB----------S---
T ss_pred cCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCCCc-chhhc-c-CchHHHH----------H---
Confidence 588999999999999998899999999876 666665543 22111 11110 0 0000000 0
Q ss_pred CCCCCCccceEEeecccccHHHHHHHhhhh---cC-CCcccchhhhhhhhhhcCCCCCcEEEEeeeeEEecc
Q 018328 208 YSTAPPCIGWVEMMAPVFSRAAWRCAWYMI---QN-DLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLG 275 (358)
Q Consensus 208 ~~~~ppcTgFVEiMaPVFSR~Awrcvw~mi---qN-DLvhGWGLD~~w~~c~qg~~~~kiGVVDa~~VvH~~ 275 (358)
....++-..+=+|+|++++.+=..+ .+ +.....+-|+.+...+.. .+ ++..++...+.|+.
T Consensus 151 -----~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~-~g-~~~~~~~~~~~~r~ 215 (255)
T 1qg8_A 151 -----NAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNH-FY-PFYPLDEELDLNYI 215 (255)
T ss_dssp -----CCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTT-TC-CBEEEEEEEEEEEE
T ss_pred -----hhcCCCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHH-hC-CEEEecCcEEEEEE
Confidence 0111222234578999998873122 11 222334567776544432 23 69999998888875
No 2
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=82.77 E-value=1.2 Score=42.79 Aligned_cols=140 Identities=14% Similarity=0.076 Sum_probs=71.5
Q ss_pred hccccEEEEecccccCCCCCHHHHHHHHHHhCCcccCCCCC---CCCCccccc----ccccccCcccceeeecccC---C
Q 018328 133 VAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALD---PVKSEVHHP----ITARRRNSKAHRRMYKYKG---S 202 (358)
Q Consensus 133 v~~YdYIflwDdDL~vd~f~i~ry~~Ivr~~gLeISQPALd---~~s~~i~h~----iT~R~~~~~vHr~~~~~~~---~ 202 (358)
.+..|||++.|+|..++.--++++++.+++..-.+.-|.++ .+. +.+. .+...-...++........ .
T Consensus 112 ~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (472)
T 1xhb_A 112 VSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDT--FEYMAGSDMTYGGFNWKLNFRWYPVPQREMD 189 (472)
T ss_dssp HCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSS--CCEECCCTTEEEEECTTCCEEEEECCHHHHH
T ss_pred hccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEEeeeeeEcCCC--ceeccCCCcccceeeccceeecccCCHHHHh
Confidence 36789999999999999999999999998876555556542 111 1110 0000000000000000000 0
Q ss_pred CCCCCCCCCCCccceEEeecccccHHHHHHHhhhhcCCCcccch-hhhhhhhhhcCCCCCcEEEEeeeeEEeccCCC
Q 018328 203 GRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWG-LDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPT 278 (358)
Q Consensus 203 ~~C~~~~~~ppcTgFVEiMaPVFSR~Awrcvw~miqNDLvhGWG-LD~~w~~c~qg~~~~kiGVVDa~~VvH~~ipt 278 (358)
.+- .....|-.+.++-..+=+|+|++|+.+ . .++.....|| =|+-+..-+. ..+.+|.++....|.|....+
T Consensus 190 ~~~-~~~~~~~~~~~~~g~~~~irr~~~~~i-G-gfde~~~~~g~ED~dl~~R~~-~~G~~i~~~p~~~v~H~~~~~ 262 (472)
T 1xhb_A 190 RRK-GDRTLPVRTPTMAGGLFSIDRDYFQEI-G-TYDAGMDIWGGENLEISFRIW-QCGGTLEIVTCSHVGHVFRKA 262 (472)
T ss_dssp HTT-TCTTSCEECSBCCSSSEEEEHHHHHHT-T-SCCTTSCTTCCCCSHHHHHHH-HTTCEEEEEEEEEEEEEC---
T ss_pred ccc-CCCCCcccCccccceeEEEEHHHHHHc-C-CCCCcccccCchhHHHHHHHH-hcCCeEEEccCcEEEEEccCc
Confidence 000 000111111122122235799999988 3 2455556674 3444432221 124689999999999987543
No 3
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=79.96 E-value=1.8 Score=42.12 Aligned_cols=208 Identities=12% Similarity=0.103 Sum_probs=100.1
Q ss_pred CCCcEEEEEeccccc----cchhHHHhcCCCCC--cEEEEEEecCccCccc--cccccCceeEEEeecccchhhhccccC
Q 018328 58 PPMNLLAIAAGIKQK----KIVDQIVRKFPSKD--FVVMLFHYDGVVDEWK--DLVWADRAIHVSAANQTKWWFAKRFLH 129 (358)
Q Consensus 58 ~~k~Lla~~VG~kqk----~~Vd~~v~kf~~~n--F~vmLfhYDg~vd~W~--d~ews~~aiHv~a~kqtKwwfakRfLH 129 (358)
.++.-|++|+=.... ..++.++..-. .+ +.|+|.. ||+.|+=- .++-. .-|++....... =++.-...
T Consensus 65 ~p~vSVIIp~yN~~~~~L~~~l~Sl~~q~~-~~~~~EIIvVD-DgS~D~t~~~~~~~~-~~v~vi~~~~n~-G~~~A~N~ 140 (501)
T 2ffu_A 65 LPATSVVITFHNEARSALLRTVVSVLKKSP-PHLIKEIILVD-DYSNDPEDGALLGKI-EKVRVLRNDRRE-GLMRSRVR 140 (501)
T ss_dssp CCCEEEEEEESSCCHHHHHHHHHHHHHHSC-GGGEEEEEEEE-CSCSCTHHHHGGGGB-TTEEEEECSSCC-HHHHHHHH
T ss_pred CCCEEEEEEeCcCcHHHHHHHHHHHHhhCc-hhhceeEEEEE-CCCCchHHHHHHhcC-CCEEEEECCCCc-CHHHHHHH
Confidence 345667777644333 23555555432 33 4666654 67766421 11111 123332211111 01111111
Q ss_pred hhhhccccEEEEecccccCCCCCHHHHHHHHHHhCCcccCCCCC---CCCCccccccccc--ccCc--cccee-eecccC
Q 018328 130 PDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALD---PVKSEVHHPITAR--RRNS--KAHRR-MYKYKG 201 (358)
Q Consensus 130 Pdiv~~YdYIflwDdDL~vd~f~i~ry~~Ivr~~gLeISQPALd---~~s~~i~h~iT~R--~~~~--~vHr~-~~~~~~ 201 (358)
-=-.+..|||++.|+|..++.--++++++.+++..-.+..|.++ .+. +.+.-... .... .++.. .+....
T Consensus 141 G~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~vv~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (501)
T 2ffu_A 141 GADAAQAKVLTFLDSHCECNEHWLEPLLERVAEDRTRVVSPIIDVINMDN--FQYVGASADLKGGFDWNLVFKWDYMTPE 218 (501)
T ss_dssp HHHHCCSSEEEECCSSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECTTT--CCEECBCSSEEEEECTTCCEEEEECCHH
T ss_pred HHHhcCCCEEEEECCCcccCccHHHHHHHHHHhCCCeEEEeeeccCcCCC--ceeecCCcccceEeeecCCCccccCCHH
Confidence 11235789999999999999999999999999887777777642 211 11100000 0000 00000 000000
Q ss_pred --CCCCCCCCCCCCccceEEeecccccHHHHHHHhhhhcCCCcccc-hhhhhhhhhhcCCCCCcEEEEeeeeEEecc
Q 018328 202 --SGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAW-GLDIQLGYCAQGDRTKNVGVVDSEYIVHLG 275 (358)
Q Consensus 202 --~~~C~~~~~~ppcTgFVEiMaPVFSR~Awrcvw~miqNDLvhGW-GLD~~w~~c~qg~~~~kiGVVDa~~VvH~~ 275 (358)
..+-. ....|-.+.++-.-+=+|+|+++..+ . .++.....| |-|+-+..-+. ..+.+|.++....|.|..
T Consensus 219 ~~~~~~~-~~~~~~~~~~~~g~~~~irr~~~~~i-G-gfde~~~~~g~ED~dl~~Rl~-~~G~~i~~~p~~~v~H~~ 291 (501)
T 2ffu_A 219 QRRSRQG-NPVAPIKTPMIAGGLFVMDKFYFEEL-G-KYDMMMDVWGGENLEISFRVW-QCGGSLEIIPCSRVGHVF 291 (501)
T ss_dssp HHHHTSS-CTTSCEECSSCCSSSEEEEHHHHHHT-T-CCCTTCCSSSSHHHHHHHHHH-HTTCEEEEEEEEEEEECC
T ss_pred HHhhccC-CCCCcccCccccceEEEEEHHHHHHh-C-CCCccccccCcchHHHHHHHH-hcCCeEEEccCcEEEEEc
Confidence 00000 00111111111122337889999988 2 345556667 45555532221 124689999999999974
No 4
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=70.54 E-value=3 Score=41.49 Aligned_cols=216 Identities=13% Similarity=0.129 Sum_probs=101.8
Q ss_pred CCcEEEEEeccccccchhHHHhcC----CCCCcEEEEEEecCccCccccc-c-ccC-ceeEEEeecccchhhhccccChh
Q 018328 59 PMNLLAIAAGIKQKKIVDQIVRKF----PSKDFVVMLFHYDGVVDEWKDL-V-WAD-RAIHVSAANQTKWWFAKRFLHPD 131 (358)
Q Consensus 59 ~k~Lla~~VG~kqk~~Vd~~v~kf----~~~nF~vmLfhYDg~vd~W~d~-e-ws~-~aiHv~a~kqtKwwfakRfLHPd 131 (358)
++.-|++|+=. ....+...++.. ...++.|+++. ||..|+=.++ + +.+ ..+++........-.+.-.-.-=
T Consensus 93 p~vsviIp~~n-~~~~l~~~l~sl~~q~~~~~~eiivvD-d~s~d~t~~~~~~~~~~~~i~~i~~~~~~~g~~~a~N~g~ 170 (625)
T 2z86_A 93 DGLSIVIPTYN-RAKILAITLACLCNQKTIYDYEVIVAD-DGSKENIEEIVREFESLLNIKYVRQKDYGYQLCAVRNLGL 170 (625)
T ss_dssp CCEEEEEEESS-CHHHHHHHHHHHHTCCCSSCEEEEEEE-ESCSSCHHHHHHTTTTTSCEEEEEECCCSCCHHHHHHHHH
T ss_pred CcEEEEEecCC-cHHHHHHHHHHHHhhccCCCeEEEEEe-CCCchhHHHHHHHhhhcCCeEEEEeCCCCcchhHHHHHHH
Confidence 45566777643 334444444432 22378887776 6776653221 1 111 12333333221111111100111
Q ss_pred hhccccEEEEecccccCCCCCHHHHHHHHHHhC-CcccCCCCCCCCCccccc------ccccc-cC----cccceeeecc
Q 018328 132 IVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEG-LEISQPALDPVKSEVHHP------ITARR-RN----SKAHRRMYKY 199 (358)
Q Consensus 132 iv~~YdYIflwDdDL~vd~f~i~ry~~Ivr~~g-LeISQPALd~~s~~i~h~------iT~R~-~~----~~vHr~~~~~ 199 (358)
-.+.+|||++.|+|..++.-.+.++++.+.+.. .-+.+|..-.+....... -..+. +. ..+.......
T Consensus 171 ~~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (625)
T 2z86_A 171 RAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAGKVEQN 250 (625)
T ss_dssp HHCCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC--------------
T ss_pred HhCCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCCchhhhhccC
Confidence 235899999999999999999999999988643 444444321111000000 00000 00 0000000000
Q ss_pred cCCCC------C-CCCCCCCCccceEEeecccccHHHHHHHhhhhcCCCcccch-hhhhhhhhhcCCCCCcEEEEeeeeE
Q 018328 200 KGSGR------C-DDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWG-LDIQLGYCAQGDRTKNVGVVDSEYI 271 (358)
Q Consensus 200 ~~~~~------C-~~~~~~ppcTgFVEiMaPVFSR~Awrcvw~miqNDLvhGWG-LD~~w~~c~qg~~~~kiGVVDa~~V 271 (358)
.+..+ . ......+.-..++=..+=+|+|++++.+ .. ++.....|| =|+-+..-+. ..+.++.+++...+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~i-Gg-fde~~~~~g~ED~dl~~Rl~-~~G~~i~~~p~~~v 327 (625)
T 2z86_A 251 KSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRA-GW-FDEEFTHWGGEDNEFGYRLY-REGCYFRSVEGAMA 327 (625)
T ss_dssp -CCCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHH-CC-CCTTCSSCCCHHHHHHHHHH-HTTCEEEECGGGCE
T ss_pred CccccchhhhcccccccccCCceeEEeeceeeeEHHHHHHh-CC-CccccccCCcchhhhhhhHH-hCCceEEEcccchh
Confidence 00000 0 0000001111233344557899999988 33 455556664 6666643322 13569999999999
Q ss_pred EeccCCCC
Q 018328 272 VHLGLPTL 279 (358)
Q Consensus 272 vH~~iptL 279 (358)
.|...++.
T Consensus 328 ~H~~~~~~ 335 (625)
T 2z86_A 328 YHQEPPGK 335 (625)
T ss_dssp EEECCC--
T ss_pred hccCCccc
Confidence 99976543
No 5
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=65.47 E-value=16 Score=36.54 Aligned_cols=213 Identities=10% Similarity=0.024 Sum_probs=101.1
Q ss_pred CCCcEEEEEecccc----ccchhHHHhcCCCCC--cEEEEEEecCccCcc-cc-cc-cc--CceeEEEeecccchhhhcc
Q 018328 58 PPMNLLAIAAGIKQ----KKIVDQIVRKFPSKD--FVVMLFHYDGVVDEW-KD-LV-WA--DRAIHVSAANQTKWWFAKR 126 (358)
Q Consensus 58 ~~k~Lla~~VG~kq----k~~Vd~~v~kf~~~n--F~vmLfhYDg~vd~W-~d-~e-ws--~~aiHv~a~kqtKwwfakR 126 (358)
.++.-|+||+=... ...++.++..- ..+ |.|+|+ =||+.|+= .+ ++ +. ..-|++....... =++.-
T Consensus 111 ~P~vSVIIp~yNe~~~~L~~~L~Sll~qt-~~~~~~EIIVV-DDgS~D~tl~~~l~~~~~~~~~v~vi~~~~n~-G~~~A 187 (570)
T 2d7i_A 111 LPNTSIIIPFHNEGWSSLLRTVHSVLNRS-PPELVAEIVLV-DDFSDREHLKKPLEDYMALFPSVRILRTKKRE-GLIRT 187 (570)
T ss_dssp CCCEEEEEEESSCCHHHHHHHHHHHHHHS-CGGGEEEEEEE-ECSCCCGGGTHHHHHHHTTSTTEEEEECSSCC-CHHHH
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHhcC-CccCcEEEEEE-ECCCCcHHHHHHHHHHHHhCCeEEEEECCCCC-CHHHH
Confidence 45667777775443 22345555542 234 366655 47776654 21 11 11 1124443222111 01111
Q ss_pred ccChhhhccccEEEEecccccCCCCCHHHHHHHHHHhCCcccCCCCCCCCC-ccccccc----cccc-Ccccceeeeccc
Q 018328 127 FLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKS-EVHHPIT----ARRR-NSKAHRRMYKYK 200 (358)
Q Consensus 127 fLHPdiv~~YdYIflwDdDL~vd~f~i~ry~~Ivr~~gLeISQPALd~~s~-~i~h~iT----~R~~-~~~vHr~~~~~~ 200 (358)
...-=-.+.-|||+|.|+|..++..-++++++.+++..-.+..|.++.-.+ .+.+... .+.. ...++...+...
T Consensus 188 ~N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~~vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (570)
T 2d7i_A 188 RMLGASVATGDVITFLDSHCEANVNWLPPLLDRIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRIPIP 267 (570)
T ss_dssp HHHHHHHCCSSEEEECCSSEEECTTCSHHHHHHHHHCTTEEEEEEEEEECTTTCCEECCTTSSCEEEECTTCCEEEECCC
T ss_pred HHHHHHhcCCCEEEEEcCCccccccHHHHHHHHHHhCCCEEEeeeeeccCCCchhhccccCCcccccccccccccccccc
Confidence 111112357899999999999999999999999987654444454321000 0111100 0000 000000000000
Q ss_pred CCCCCCCCCCCCCccceEEeecccccHHHHHHHhhhhcCCCcccc-hhhhhhhhhhcCCCCCcEEEEeeeeEEeccCC
Q 018328 201 GSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAW-GLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLP 277 (358)
Q Consensus 201 ~~~~C~~~~~~ppcTgFVEiMaPVFSR~Awrcvw~miqNDLvhGW-GLD~~w~~c~qg~~~~kiGVVDa~~VvH~~ip 277 (358)
....- .....|-.+.++-.-+=+|+|++|+.+ .. +++....| |=|+-+..-+. ..+.+|.++....|.|....
T Consensus 268 ~~~~~-~~~~~~~~~~~~~g~~~~irr~~~~~i-Gg-fDe~~~~~g~ED~dl~~Rl~-~~G~~i~~~p~~~v~H~~r~ 341 (570)
T 2d7i_A 268 PELQK-ADPSDPFESPVMAGGLFAVDRKWFWEL-GG-YDPGLEIWGGEQYEISFKVW-MCGGRMEDIPCSRVGHIYRK 341 (570)
T ss_dssp TTTCC-SSTTSCEECSSCCSSSEEEEHHHHHHT-TS-SCTTCCSSSSHHHHHHHHHH-HTTCEEEEEEEEEEEECCCS
T ss_pred hhhhc-cCCCcceecccccceEEEEEHHHHHhc-CC-CCCcccccCcchHHHHHHHH-hCCCeEEEccCeEEEEEccc
Confidence 00000 000111111222222346889999988 32 56666677 44555543222 12568999999999997543
No 6
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=62.60 E-value=5.3 Score=33.65 Aligned_cols=108 Identities=19% Similarity=0.118 Sum_probs=59.8
Q ss_pred CCcEEEEEeccccccchhHHHhcC---CCCCcEEEEEEecCccCccccc--ccc--CceeEEEe-ecccchhhhccccCh
Q 018328 59 PMNLLAIAAGIKQKKIVDQIVRKF---PSKDFVVMLFHYDGVVDEWKDL--VWA--DRAIHVSA-ANQTKWWFAKRFLHP 130 (358)
Q Consensus 59 ~k~Lla~~VG~kqk~~Vd~~v~kf---~~~nF~vmLfhYDg~vd~W~d~--ews--~~aiHv~a-~kqtKwwfakRfLHP 130 (358)
++.-|++|+= +....+..+++-. ...+|.|++.. ||..|+=.++ ++. ..-|++.. .+..+ -.+ |.. -
T Consensus 5 p~vsViIp~y-n~~~~l~~~l~Sl~~q~~~~~eiIvvD-d~S~d~t~~~~~~~~~~~~~i~~i~~~n~G~-~~a-~N~-g 79 (240)
T 3bcv_A 5 PKVSVIVPIY-NVEKYLDQCVQALLAQTLSDIEIILID-DESPDNCPKICDDYAAQYPNIKVIHKKNAGL-GMA-CNS-G 79 (240)
T ss_dssp CSEEEEEEES-SCTTTHHHHHHHHHTCSSSSEEEEEEE-CCCSSSHHHHHHHHHHHCSSEEEEECCCCCH-HHH-HHH-H
T ss_pred CcEEEEEecC-CCHHHHHHHHHHHHhCcCCCeEEEEEE-CCCCcCHHHHHHHHHhhCCCEEEEECCCCCh-HHH-HHH-H
Confidence 4566777763 3334554444432 12477877664 7776642211 111 01133321 12111 111 110 1
Q ss_pred hhhccccEEEEecccccCCCCCHHHHHHHHHHhCCcccCCC
Q 018328 131 DIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPA 171 (358)
Q Consensus 131 div~~YdYIflwDdDL~vd~f~i~ry~~Ivr~~gLeISQPA 171 (358)
=-.+..|||++.|+|..++...++++++.+++.+.++...+
T Consensus 80 ~~~a~g~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~~~ 120 (240)
T 3bcv_A 80 LDVATGEYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVFTG 120 (240)
T ss_dssp HHHCCSSEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEEC-
T ss_pred HHHcCCCEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEEEe
Confidence 11256799999999999999999999999998777766544
No 7
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=59.62 E-value=7.2 Score=40.44 Aligned_cols=37 Identities=19% Similarity=0.200 Sum_probs=30.8
Q ss_pred cccEEEEecccccCCCCCHHHHHHHHHHh-CCcccCCC
Q 018328 135 EYNYIFLWDEDIGVENFNPRRYLSIVKDE-GLEISQPA 171 (358)
Q Consensus 135 ~YdYIflwDdDL~vd~f~i~ry~~Ivr~~-gLeISQPA 171 (358)
.||||+|.|+|..++...++++++.++.. ...+..|.
T Consensus 268 ~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~ 305 (657)
T 4fix_A 268 DCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQ 305 (657)
T ss_dssp CCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEE
T ss_pred CCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeE
Confidence 68999999999999999999999999876 34455553
No 8
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=36.11 E-value=34 Score=35.97 Aligned_cols=127 Identities=14% Similarity=0.057 Sum_probs=68.3
Q ss_pred ccccEEEEecccccCCCCCHHHHHHHHH-HhCCcccCCCCCCCCCc-ccccccc--c--ccCcccceeeecccCCCCCCC
Q 018328 134 AEYNYIFLWDEDIGVENFNPRRYLSIVK-DEGLEISQPALDPVKSE-VHHPITA--R--RRNSKAHRRMYKYKGSGRCDD 207 (358)
Q Consensus 134 ~~YdYIflwDdDL~vd~f~i~ry~~Ivr-~~gLeISQPALd~~s~~-i~h~iT~--R--~~~~~vHr~~~~~~~~~~C~~ 207 (358)
+.+|||++.|+|..++...+.++++.+. ..+..+.|......... +...... + .....++........ ..
T Consensus 237 a~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--- 312 (802)
T 4hg6_A 237 LKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDPIQRNLALGDRCPPENEMFYGKIHRGLD-RW--- 312 (802)
T ss_dssp CCCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCHHHHHHTCCTTSCCTTHHHHHTHHHHHH-HT---
T ss_pred cCCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCchHhhhhhHHhhhhHHHHHHHHHHHhhHh-hc---
Confidence 5799999999999999999999999985 44666666543211100 1000000 0 000001100000000 00
Q ss_pred CCCCCCccceEEeecccccHHHHHHHhhhhcCCCcccchhhhhhhhhhcCCCCCcEEEEeeeeEEecc
Q 018328 208 YSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLG 275 (358)
Q Consensus 208 ~~~~ppcTgFVEiMaPVFSR~Awrcvw~miqNDLvhGWGLD~~w~~c~qg~~~~kiGVVDa~~VvH~~ 275 (358)
.++ ++...+=+|+|++++.+ ..+..+ ..+=|+.+...+. ..+.+++.++...+.|..
T Consensus 313 --~~~----~~~G~~~~~Rr~al~~v-Ggf~~~---~~~ED~~l~~rl~-~~G~ri~~~~~~~~~~~~ 369 (802)
T 4hg6_A 313 --GGA----FFCGSAAVLRRRALDEA-GGFAGE---TITEDAETALEIH-SRGWKSLYIDRAMIAGLQ 369 (802)
T ss_dssp --TCC----CCCSSSEEEEHHHHHHH-TTCCCS---SSSHHHHHHHHHH-TTTCCEEECCCCCEEECC
T ss_pred --CCc----eecccchhhhHHHHHHc-CCcCCC---CcchHHHHHHHHH-HcCCeEEEecCCEEEecC
Confidence 001 11233447999999987 322222 2357888876554 246789998877777653
No 9
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=35.92 E-value=23 Score=34.66 Aligned_cols=182 Identities=10% Similarity=0.060 Sum_probs=96.6
Q ss_pred cEEEEEeccccccchhHHHhcCC----CCCcEEEEEEecCccCccccc-c-----c----cCceeEEEee-----cccc-
Q 018328 61 NLLAIAAGIKQKKIVDQIVRKFP----SKDFVVMLFHYDGVVDEWKDL-V-----W----ADRAIHVSAA-----NQTK- 120 (358)
Q Consensus 61 ~Lla~~VG~kqk~~Vd~~v~kf~----~~nF~vmLfhYDg~vd~W~d~-e-----w----s~~aiHv~a~-----kqtK- 120 (358)
+||++|+ + .+++..++.... ..++.|++.. ||++|+=.+. + . ..+.+..... +..|
T Consensus 2 slVIiP~-~--eE~I~~vl~~l~~~~~~~~~EIIVVD-DGStD~T~eia~~la~~~~~~~g~~vi~~~~~r~~~~n~GkG 77 (397)
T 2bo4_A 2 SLVVFPF-K--HEHPEVLLHNVRVAAAHPRVHEVLCI-GYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKG 77 (397)
T ss_dssp CEEEEEC-C--SSCHHHHHHHHHHHHHSTTCCEEEEE-ESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHH
T ss_pred cEEEEeC-C--ccCHHHHHHHHHHhccCCCeEEEEEE-CcCCccHHHHHHHhhhhcccccCCeEEEEecccCCCCCCCHH
Confidence 6888887 3 247777776431 2467775554 8888863332 1 1 1123333222 3444
Q ss_pred ---hhhhccccChhhhccccEEEEeccccc-CCCCCHHHHHHHHHHhCCcccCCCCCC--CCCcccccccccccCcccce
Q 018328 121 ---WWFAKRFLHPDIVAEYNYIFLWDEDIG-VENFNPRRYLSIVKDEGLEISQPALDP--VKSEVHHPITARRRNSKAHR 194 (358)
Q Consensus 121 ---wwfakRfLHPdiv~~YdYIflwDdDL~-vd~f~i~ry~~Ivr~~gLeISQPALd~--~s~~i~h~iT~R~~~~~vHr 194 (358)
+--++.-+ -.+.+|||.+.|-|+. .+...+.++++.+.+ |.++.-+.... ..+.+.+.+ .|. +-+
T Consensus 78 ~Al~~G~~~Al---~~a~gd~vv~mDADlq~~~P~~i~~Ll~~l~~-g~D~V~g~~~r~~~~~~~~~~~-~~~----ll~ 148 (397)
T 2bo4_A 78 DGMNTALRYFL---EETQWERIHFYDADITSFGPDWITKAEEAADF-GYGLVRHYFPRASTDAMITWMI-TRT----GFA 148 (397)
T ss_dssp HHHHHHHHHHH---HHCCCSEEEECCTTCSSCCHHHHHHHHHHHHT-TCSEEEEECCCCTTSCHHHHHT-HHH----HHH
T ss_pred HHHHHHHHHHH---HhCCCCEEEEEcCCCCCCCHHHHHHHHHHHHc-CCCEEEEEeccccCCcHHHHHH-HHH----HHH
Confidence 11110000 1368999999999996 799999999987754 66666554321 111122211 110 000
Q ss_pred eeecccCCCCCCCCCCCCCccceEEeecccccHHHHHHHhhh-hcCCCcccchhhhhhhhhhcCCCCCcEEEEe
Q 018328 195 RMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYM-IQNDLIHAWGLDIQLGYCAQGDRTKNVGVVD 267 (358)
Q Consensus 195 ~~~~~~~~~~C~~~~~~ppcTgFVEiMaPVFSR~Awrcvw~m-iqNDLvhGWGLD~~w~~c~qg~~~~kiGVVD 267 (358)
..|.. ..|. ..+.| -+||. +|+|++++.+... +.. ..+|||.|..+...+.. .+.+|+-|.
T Consensus 149 ~~~~~---~~~~-~i~dp-~sG~~-----a~~R~vl~~l~~~~~~~-~~~~fg~eiel~~~a~~-~G~rI~EVp 210 (397)
T 2bo4_A 149 LLWPH---TELS-WIEQP-LGGEL-----LMRREVAAMLYEDERVR-RRSDWGIDTLYTFVTVQ-QGVSIYECY 210 (397)
T ss_dssp HHCTT---SSGG-GCSCT-TCCCE-----EEEHHHHHHHHHCHHHH-TCCSTTHHHHHHHHHHH-TTCCEEEEE
T ss_pred HHHHH---hhcc-ccccC-CcccE-----EEeHHHHHHHhhhcccC-cCCCcchHHHHHHHHHH-cCCEEEEEE
Confidence 01110 0111 11222 34555 5999999876321 112 56899999988765542 346787765
No 10
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=32.61 E-value=50 Score=32.64 Aligned_cols=108 Identities=18% Similarity=0.081 Sum_probs=56.0
Q ss_pred CCCcEEEEEeccccccchhHHHhcC---CCCCcEEEEEEecCccCcccc-c-cc--cCceeEEE-eecccchhhhccccC
Q 018328 58 PPMNLLAIAAGIKQKKIVDQIVRKF---PSKDFVVMLFHYDGVVDEWKD-L-VW--ADRAIHVS-AANQTKWWFAKRFLH 129 (358)
Q Consensus 58 ~~k~Lla~~VG~kqk~~Vd~~v~kf---~~~nF~vmLfhYDg~vd~W~d-~-ew--s~~aiHv~-a~kqtKwwfakRfLH 129 (358)
.++.-|.+|+ ++....+...|+.. .-.+|.|++.. ||..|+=.+ + ++ ...-|++. ..+..+ +.-+-.
T Consensus 374 ~~~vsiii~~-yn~~~~l~~~l~s~~~q~~~~~eiivvd-d~S~d~t~~~~~~~~~~~~~i~~~~~~n~G~---~~a~n~ 448 (625)
T 2z86_A 374 VPLVSIYIPA-YNCSKYIVRCVESALNQTITDLEVCICD-DGSTDDTLRILQEHYANHPRVRFISQKNKGI---GSASNT 448 (625)
T ss_dssp SCSEEEEEEE-SSCTTTHHHHHHHHHSSSCCSEEEEEEE-ESCSSSHHHHHHHHHTTCTTEEEEEECCCCH---HHHHHH
T ss_pred CCeEEEEEeC-CCCHHHHHHHHHHHHhCcCCCeEEEEEE-CcCChhHHHHHHHHHhhCCcEEEEeCCCCCH---HHHHHH
Confidence 3455566665 34445555554432 12578877765 566654211 1 11 01123332 222221 111111
Q ss_pred hhhhccccEEEEecccccCCCCCHHHHHHHHHH-hCCcccCC
Q 018328 130 PDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKD-EGLEISQP 170 (358)
Q Consensus 130 Pdiv~~YdYIflwDdDL~vd~f~i~ry~~Ivr~-~gLeISQP 170 (358)
-=-.+..|||++.|+|..++...++++++.+.+ .+..+..+
T Consensus 449 g~~~a~g~~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~ 490 (625)
T 2z86_A 449 AVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYT 490 (625)
T ss_dssp HHHHCCSSEEEECCTTCEECTTHHHHHHHHHHHCTTCSEEEE
T ss_pred HHHhcCCCEEEEECCCcccChhHHHHHHHHHHhCCCeeEEEe
Confidence 112357899999999999988888888877754 33444433
No 11
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=32.21 E-value=16 Score=33.68 Aligned_cols=31 Identities=23% Similarity=0.478 Sum_probs=24.6
Q ss_pred ccccEEEEeccc---ccCCCCCHHHHHHHHHHhCCccc
Q 018328 134 AEYNYIFLWDED---IGVENFNPRRYLSIVKDEGLEIS 168 (358)
Q Consensus 134 ~~YdYIflwDdD---L~vd~f~i~ry~~Ivr~~gLeIS 168 (358)
..|||+++.|-| ++.+..++-|++ +.|.+|.
T Consensus 52 ~~~dhllfIDAD~~~I~FdPe~V~rLl----~~g~DVV 85 (203)
T 2c0n_A 52 KDYDTLAFLDEDVVPIEIDFQKVEAKF----NEGYDVV 85 (203)
T ss_dssp TTCCEEEEECTTEEEEECCHHHHHHHH----HHTCSEE
T ss_pred CCCCEEEEEeCCCCccccCHHHHHHHH----hCCCCEE
Confidence 369999999999 988877777777 5566654
No 12
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*
Probab=27.53 E-value=28 Score=33.33 Aligned_cols=103 Identities=14% Similarity=0.153 Sum_probs=59.7
Q ss_pred CCcEEEEEeccccccchhHHHhcCCC-CCcEEEEEEecCccCccccccccC---ceeEEEeecccchhhhccccChhhhc
Q 018328 59 PMNLLAIAAGIKQKKIVDQIVRKFPS-KDFVVMLFHYDGVVDEWKDLVWAD---RAIHVSAANQTKWWFAKRFLHPDIVA 134 (358)
Q Consensus 59 ~k~Lla~~VG~kqk~~Vd~~v~kf~~-~nF~vmLfhYDg~vd~W~d~ews~---~aiHv~a~kqtKwwfakRfLHPdiv~ 134 (358)
.++-+.|-+ ++......++|+.... ..-+=+++..-..-..--+..|.. .++.|....+.+==+-.||+. .-.-
T Consensus 28 ~~FTvvi~t-y~R~~~L~~lv~~~~~~~~v~~IvVvWn~~~~~pp~~~~~~~~~~~vpv~v~~~~~nsLnnRF~p-~~~i 105 (293)
T 1omz_A 28 DSFTLIMQT-YNRTDLLLRLLNHYQAVPSLHKVIVVWNNVGEKGPEELWNSLGPHPIPVIFKPQTANKMRNRLQV-FPEV 105 (293)
T ss_dssp TCEEEEEEE-SSCHHHHHHHHHHHTTSTTEEEEEEEECCTTCCCTHHHHHHTCCCSSCEEEEECSSCCGGGGGSC-CTTC
T ss_pred CceEEEEEe-ecccHHHHHHHHHHhcCCCCCeEEEEeCCCCCCCChhhccccCCCCccEEEEeCCCCchhhccCC-CccC
Confidence 345555443 3344555566664422 344445554433211122233422 134444445544446788874 3334
Q ss_pred cccEEEEecccccCCCCCHHHHHHHHHHh
Q 018328 135 EYNYIFLWDEDIGVENFNPRRYLSIVKDE 163 (358)
Q Consensus 135 ~YdYIflwDdDL~vd~f~i~ry~~Ivr~~ 163 (358)
+-|+||..|||+.+..-+++.=|++-+++
T Consensus 106 ~T~AVLslDDDv~l~~~el~faF~vWr~~ 134 (293)
T 1omz_A 106 ETNAVLMVDDDTLISAQDLVFAFSIWQQF 134 (293)
T ss_dssp CSSEEEEECTTEEECHHHHHHHHHHHTTS
T ss_pred CcCEEEEEcCCCCCCHHHHHHHHHHHHHC
Confidence 68999999999999999999989888764
No 13
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=24.03 E-value=59 Score=28.45 Aligned_cols=29 Identities=10% Similarity=0.273 Sum_probs=26.5
Q ss_pred ccccEEEEecccccCCCCCHHHHHHHHHH
Q 018328 134 AEYNYIFLWDEDIGVENFNPRRYLSIVKD 162 (358)
Q Consensus 134 ~~YdYIflwDdDL~vd~f~i~ry~~Ivr~ 162 (358)
+.-|||+|.|.|..++.-.++++++.+++
T Consensus 73 A~g~yl~fln~D~~~~~~~l~~l~~~~~~ 101 (249)
T 2nxv_A 73 CKGRYVIFCHEDVELVDRGYDDLVAAIEA 101 (249)
T ss_dssp CCSSEEEEEETTEECSSCCHHHHHHHHHH
T ss_pred cCCCEEEEECCCcccCccHHHHHHHHHHh
Confidence 46799999999999999999999999887
No 14
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=21.46 E-value=20 Score=36.82 Aligned_cols=36 Identities=19% Similarity=0.276 Sum_probs=0.0
Q ss_pred ccccEEEEecccccCCCCCHHHHHHHHHHhCCcccC
Q 018328 134 AEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQ 169 (358)
Q Consensus 134 ~~YdYIflwDdDL~vd~f~i~ry~~Ivr~~gLeISQ 169 (358)
+..|||++.|+|-.++..-++++++.+...++-++.
T Consensus 82 A~gdyI~flD~Dd~~~p~~l~~l~~~l~~~d~v~~~ 117 (729)
T 3l7i_A 82 VETPYFMFLDADDELASYAITFYLEKFNNTDGLIAP 117 (729)
T ss_dssp ------------------------------------
T ss_pred ccCCEEEEECCCCCCChhHHHHHHHHhcCCCEEEEe
Confidence 578999999999999888888888888744444443
Done!