Query 018329
Match_columns 358
No_of_seqs 207 out of 1565
Neff 7.5
Searched_HMMs 46136
Date Fri Mar 29 08:05:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018329.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018329hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1282 Serine carboxypeptidas 100.0 7.1E-91 1.5E-95 688.1 28.6 307 32-358 23-337 (454)
2 PLN02209 serine carboxypeptida 100.0 2.4E-76 5.2E-81 588.8 30.7 298 33-358 19-328 (437)
3 PLN03016 sinapoylglucose-malat 100.0 5.9E-76 1.3E-80 585.8 29.5 294 35-358 19-324 (433)
4 PF00450 Peptidase_S10: Serine 100.0 1.9E-75 4.2E-80 580.0 20.5 293 43-358 1-303 (415)
5 PTZ00472 serine carboxypeptida 100.0 2.8E-70 6.1E-75 550.5 29.4 273 47-358 42-338 (462)
6 COG2939 Carboxypeptidase C (ca 100.0 5.3E-53 1.2E-57 414.8 20.0 270 49-358 73-371 (498)
7 PLN02213 sinapoylglucose-malat 100.0 2.5E-47 5.5E-52 368.0 19.2 204 126-358 1-210 (319)
8 KOG1283 Serine carboxypeptidas 100.0 2.5E-43 5.4E-48 326.4 11.3 283 53-355 4-296 (414)
9 TIGR03611 RutD pyrimidine util 98.4 1.8E-06 3.9E-11 78.3 9.5 116 68-226 2-117 (257)
10 PRK00870 haloalkane dehalogena 98.2 2.8E-05 6E-10 74.0 13.3 140 35-223 7-149 (302)
11 TIGR03056 bchO_mg_che_rel puta 98.2 1.4E-05 3E-10 74.0 10.8 123 56-226 10-132 (278)
12 PHA02857 monoglyceride lipase; 98.1 1.5E-05 3.3E-10 74.5 10.2 126 63-227 9-135 (276)
13 TIGR01250 pro_imino_pep_2 prol 98.1 1E-05 2.3E-10 74.3 8.8 130 53-225 3-132 (288)
14 PLN02824 hydrolase, alpha/beta 98.1 2.5E-05 5.5E-10 73.9 10.4 123 56-224 12-137 (294)
15 TIGR01249 pro_imino_pep_1 prol 98.0 4.9E-05 1.1E-09 72.7 10.6 126 54-225 6-131 (306)
16 PRK10673 acyl-CoA esterase; Pr 98.0 3.1E-05 6.7E-10 71.1 8.6 104 76-222 11-114 (255)
17 PF10340 DUF2424: Protein of u 97.9 2.6E-05 5.6E-10 76.5 7.5 133 66-228 105-239 (374)
18 PRK06489 hypothetical protein; 97.9 0.00012 2.6E-09 71.8 11.8 131 64-223 49-188 (360)
19 PLN02298 hydrolase, alpha/beta 97.9 8.1E-05 1.8E-09 71.8 9.8 138 53-226 33-171 (330)
20 PF12697 Abhydrolase_6: Alpha/ 97.9 3.1E-05 6.6E-10 68.0 6.2 103 84-226 1-103 (228)
21 PRK03592 haloalkane dehalogena 97.8 0.00016 3.4E-09 68.4 11.1 115 64-226 16-130 (295)
22 PLN02385 hydrolase; alpha/beta 97.8 0.00016 3.4E-09 70.6 11.0 128 63-225 70-198 (349)
23 TIGR02240 PHA_depoly_arom poly 97.8 0.00018 3.9E-09 67.5 10.7 117 64-225 11-127 (276)
24 PRK03204 haloalkane dehalogena 97.7 0.00033 7.1E-09 66.4 11.7 121 54-224 16-136 (286)
25 PLN02652 hydrolase; alpha/beta 97.7 0.00039 8.5E-09 69.4 11.7 130 62-226 118-247 (395)
26 COG1506 DAP2 Dipeptidyl aminop 97.6 0.00017 3.7E-09 76.0 8.2 143 56-228 367-511 (620)
27 TIGR02427 protocat_pcaD 3-oxoa 97.6 0.00026 5.7E-09 63.3 8.2 89 79-198 11-99 (251)
28 TIGR03695 menH_SHCHC 2-succiny 97.5 0.00029 6.4E-09 62.7 7.9 105 81-224 1-105 (251)
29 PLN02894 hydrolase, alpha/beta 97.5 0.00083 1.8E-08 67.2 11.8 109 79-224 103-211 (402)
30 PRK11126 2-succinyl-6-hydroxy- 97.5 0.00029 6.2E-09 64.2 7.8 100 81-223 2-101 (242)
31 PLN03084 alpha/beta hydrolase 97.5 0.00078 1.7E-08 67.0 10.8 133 49-225 101-233 (383)
32 PLN02679 hydrolase, alpha/beta 97.5 0.001 2.3E-08 65.3 11.4 128 54-224 63-191 (360)
33 PRK05077 frsA fermentation/res 97.5 0.00073 1.6E-08 67.9 10.3 80 127-226 223-302 (414)
34 PRK10749 lysophospholipase L2; 97.4 0.00097 2.1E-08 64.6 10.7 125 64-225 40-167 (330)
35 TIGR03343 biphenyl_bphD 2-hydr 97.4 0.00097 2.1E-08 62.1 9.7 106 81-223 30-135 (282)
36 PRK14875 acetoin dehydrogenase 97.4 0.0013 2.8E-08 63.9 10.4 103 79-223 129-231 (371)
37 PRK10349 carboxylesterase BioH 97.4 0.00056 1.2E-08 63.1 7.5 95 82-223 14-108 (256)
38 TIGR03101 hydr2_PEP hydrolase, 97.3 0.0017 3.8E-08 61.3 10.7 125 64-228 9-138 (266)
39 PLN02578 hydrolase 97.3 0.0018 4E-08 63.3 10.7 112 64-223 75-186 (354)
40 PLN02211 methyl indole-3-aceta 97.2 0.002 4.3E-08 60.8 9.3 107 79-224 16-122 (273)
41 KOG4409 Predicted hydrolase/ac 97.2 0.0021 4.5E-08 62.2 9.3 134 52-227 65-198 (365)
42 PLN02965 Probable pheophorbida 97.2 0.0014 3E-08 60.7 8.1 101 84-223 6-106 (255)
43 PLN03087 BODYGUARD 1 domain co 97.2 0.0034 7.3E-08 64.2 11.5 134 50-223 174-308 (481)
44 TIGR01738 bioH putative pimelo 97.2 0.001 2.2E-08 59.3 6.9 96 81-223 4-99 (245)
45 TIGR01840 esterase_phb esteras 96.9 0.0045 9.8E-08 55.9 8.5 55 158-224 76-130 (212)
46 TIGR02821 fghA_ester_D S-formy 96.8 0.02 4.4E-07 53.9 12.5 42 175-227 135-176 (275)
47 PRK08775 homoserine O-acetyltr 96.8 0.0075 1.6E-07 58.6 9.5 77 125-225 98-174 (343)
48 PRK05855 short chain dehydroge 96.8 0.0066 1.4E-07 62.6 9.5 97 64-193 12-109 (582)
49 COG2267 PldB Lysophospholipase 96.7 0.013 2.8E-07 56.3 10.7 135 54-227 11-145 (298)
50 KOG1515 Arylacetamide deacetyl 96.7 0.013 2.9E-07 57.1 10.7 138 63-228 70-211 (336)
51 PLN02442 S-formylglutathione h 96.7 0.0079 1.7E-07 57.1 8.9 56 158-227 126-181 (283)
52 PLN02980 2-oxoglutarate decarb 96.7 0.012 2.7E-07 68.6 11.7 107 78-223 1368-1479(1655)
53 PF00561 Abhydrolase_1: alpha/ 96.6 0.0031 6.7E-08 56.1 4.9 77 128-223 2-78 (230)
54 KOG1455 Lysophospholipase [Lip 96.4 0.032 6.8E-07 53.2 10.8 129 63-224 36-164 (313)
55 COG0596 MhpC Predicted hydrola 96.4 0.015 3.2E-07 51.1 8.3 104 81-225 21-124 (282)
56 PRK10566 esterase; Provisional 96.4 0.019 4.1E-07 52.6 9.2 108 69-197 15-126 (249)
57 PLN02511 hydrolase 96.4 0.0085 1.8E-07 59.6 7.2 114 56-196 75-191 (388)
58 KOG2564 Predicted acetyltransf 96.4 0.0072 1.6E-07 56.9 6.1 109 80-223 73-181 (343)
59 cd00707 Pancreat_lipase_like P 96.3 0.0058 1.3E-07 57.9 5.0 112 79-223 34-146 (275)
60 PRK10985 putative hydrolase; P 96.1 0.027 5.8E-07 54.4 8.6 108 64-196 41-149 (324)
61 PRK07581 hypothetical protein; 96.0 0.038 8.2E-07 53.4 9.5 129 64-223 25-158 (339)
62 TIGR00976 /NonD putative hydro 96.0 0.017 3.8E-07 60.0 7.3 130 63-227 5-135 (550)
63 TIGR01607 PST-A Plasmodium sub 95.9 0.023 4.9E-07 55.3 7.0 152 63-225 6-186 (332)
64 PRK10115 protease 2; Provision 95.8 0.028 6E-07 60.2 8.2 143 57-229 419-564 (686)
65 TIGR03100 hydr1_PEP hydrolase, 95.8 0.067 1.5E-06 50.4 9.9 79 127-226 58-136 (274)
66 TIGR03230 lipo_lipase lipoprot 95.8 0.048 1E-06 55.2 9.3 80 126-223 73-153 (442)
67 PRK00175 metX homoserine O-ace 95.6 0.091 2E-06 52.0 10.5 138 64-224 32-182 (379)
68 PF00326 Peptidase_S9: Prolyl 95.5 0.0088 1.9E-07 53.8 2.6 93 126-231 14-106 (213)
69 PRK10162 acetyl esterase; Prov 95.4 0.048 1E-06 52.7 7.5 63 158-226 135-197 (318)
70 PLN00021 chlorophyllase 95.3 0.055 1.2E-06 52.4 7.5 116 78-226 49-168 (313)
71 KOG4178 Soluble epoxide hydrol 95.2 0.17 3.7E-06 48.8 10.3 137 50-228 20-157 (322)
72 KOG2100 Dipeptidyl aminopeptid 94.7 0.077 1.7E-06 57.4 7.3 137 64-227 507-647 (755)
73 COG3509 LpqC Poly(3-hydroxybut 94.7 0.38 8.1E-06 45.9 10.8 125 64-224 44-179 (312)
74 PF00975 Thioesterase: Thioest 94.6 0.16 3.5E-06 45.7 8.3 102 83-224 2-104 (229)
75 PF06500 DUF1100: Alpha/beta h 94.4 0.018 3.9E-07 57.4 1.5 82 126-227 218-299 (411)
76 COG4099 Predicted peptidase [G 94.2 0.71 1.5E-05 44.2 11.5 39 162-200 253-291 (387)
77 KOG4391 Predicted alpha/beta h 93.8 0.6 1.3E-05 42.8 9.7 123 64-226 64-186 (300)
78 PF12695 Abhydrolase_5: Alpha/ 93.5 0.11 2.4E-06 42.8 4.5 94 83-223 1-94 (145)
79 PF10503 Esterase_phd: Esteras 93.2 0.26 5.7E-06 45.3 6.8 50 164-224 83-132 (220)
80 KOG1838 Alpha/beta hydrolase [ 92.8 0.77 1.7E-05 45.8 9.8 122 66-224 106-236 (409)
81 KOG1454 Predicted hydrolase/ac 92.7 0.58 1.3E-05 45.5 8.8 95 79-201 56-151 (326)
82 PF10230 DUF2305: Uncharacteri 92.5 0.51 1.1E-05 44.5 7.9 119 81-226 2-124 (266)
83 PRK11460 putative hydrolase; P 92.5 0.6 1.3E-05 42.9 8.1 53 160-224 86-138 (232)
84 cd00312 Esterase_lipase Estera 92.1 0.55 1.2E-05 47.9 8.2 39 157-196 156-194 (493)
85 TIGR01392 homoserO_Ac_trn homo 91.6 1.5 3.2E-05 42.7 10.2 135 64-224 15-162 (351)
86 COG0657 Aes Esterase/lipase [L 91.6 2.2 4.7E-05 40.7 11.2 52 177-235 151-202 (312)
87 KOG3975 Uncharacterized conser 90.2 0.93 2E-05 42.3 6.7 105 79-203 27-131 (301)
88 PF02230 Abhydrolase_2: Phosph 89.9 0.3 6.6E-06 44.1 3.3 74 156-242 85-164 (216)
89 PLN02872 triacylglycerol lipas 89.4 2.4 5.2E-05 42.4 9.6 96 79-192 72-174 (395)
90 COG0400 Predicted esterase [Ge 89.3 2.2 4.9E-05 38.7 8.5 78 153-242 75-155 (207)
91 PF07859 Abhydrolase_3: alpha/ 88.7 0.79 1.7E-05 40.7 5.2 62 157-226 48-112 (211)
92 PRK05371 x-prolyl-dipeptidyl a 87.8 1 2.2E-05 49.0 6.1 85 124-226 277-375 (767)
93 PF02129 Peptidase_S15: X-Pro 87.8 0.58 1.3E-05 43.9 3.8 83 127-228 58-140 (272)
94 PLN02454 triacylglycerol lipas 87.7 1.3 2.9E-05 44.3 6.4 68 155-226 206-273 (414)
95 PF11144 DUF2920: Protein of u 87.5 1 2.3E-05 44.8 5.4 63 154-227 159-222 (403)
96 PF01764 Lipase_3: Lipase (cla 87.2 1 2.3E-05 37.2 4.6 62 156-224 45-106 (140)
97 PF06057 VirJ: Bacterial virul 86.9 1.6 3.4E-05 39.2 5.7 64 153-226 46-109 (192)
98 PF05990 DUF900: Alpha/beta hy 86.3 1.1 2.5E-05 41.3 4.8 67 156-227 74-140 (233)
99 cd00741 Lipase Lipase. Lipase 86.2 1.9 4E-05 36.6 5.8 44 156-202 9-52 (153)
100 PF05677 DUF818: Chlamydia CHL 84.4 1.4 3.1E-05 43.0 4.5 94 76-194 132-231 (365)
101 cd00519 Lipase_3 Lipase (class 84.3 2.2 4.8E-05 38.8 5.7 60 157-225 110-169 (229)
102 PRK13604 luxD acyl transferase 83.8 5.6 0.00012 38.4 8.4 124 63-225 18-142 (307)
103 PF11288 DUF3089: Protein of u 83.7 1.5 3.3E-05 39.8 4.2 44 156-201 75-118 (207)
104 PF08237 PE-PPE: PE-PPE domain 82.5 3.2 7E-05 38.2 6.0 86 128-223 4-89 (225)
105 PLN02733 phosphatidylcholine-s 80.9 3.6 7.7E-05 41.8 6.1 40 155-197 142-181 (440)
106 PF05728 UPF0227: Uncharacteri 80.8 2.2 4.8E-05 38.1 4.1 39 177-229 58-96 (187)
107 PF10081 Abhydrolase_9: Alpha/ 80.0 3.7 8.1E-05 39.0 5.5 37 154-190 85-121 (289)
108 PF05577 Peptidase_S28: Serine 79.9 4 8.7E-05 41.0 6.1 98 126-235 59-159 (434)
109 PRK10252 entF enterobactin syn 79.7 12 0.00027 42.7 10.8 103 81-223 1068-1170(1296)
110 TIGR03502 lipase_Pla1_cef extr 77.4 8.1 0.00017 42.1 7.8 45 153-197 521-574 (792)
111 COG4425 Predicted membrane pro 75.7 6.6 0.00014 39.7 6.0 37 154-190 373-409 (588)
112 PRK10439 enterobactin/ferric e 75.3 13 0.00028 37.5 8.2 36 178-224 288-323 (411)
113 PRK06765 homoserine O-acetyltr 74.9 4.9 0.00011 40.1 5.1 53 153-223 142-195 (389)
114 PF00151 Lipase: Lipase; Inte 74.7 0.92 2E-05 44.3 -0.2 70 126-201 104-173 (331)
115 PF03283 PAE: Pectinacetyleste 74.1 27 0.00058 34.6 9.9 150 64-226 34-199 (361)
116 PLN02571 triacylglycerol lipas 73.6 7.8 0.00017 39.0 6.0 70 156-226 205-277 (413)
117 PRK14567 triosephosphate isome 73.1 8 0.00017 36.3 5.7 62 154-227 177-238 (253)
118 PF12146 Hydrolase_4: Putative 72.2 20 0.00043 27.1 6.8 78 65-166 2-79 (79)
119 PRK14566 triosephosphate isome 71.2 9.2 0.0002 36.1 5.6 62 154-227 187-248 (260)
120 PF06259 Abhydrolase_8: Alpha/ 70.5 9.9 0.00022 33.7 5.4 65 125-198 62-129 (177)
121 PF11187 DUF2974: Protein of u 69.2 11 0.00025 34.6 5.7 53 159-222 69-121 (224)
122 KOG4627 Kynurenine formamidase 68.8 7.4 0.00016 35.6 4.2 72 137-225 102-173 (270)
123 smart00824 PKS_TE Thioesterase 68.7 21 0.00045 30.6 7.2 76 126-222 25-100 (212)
124 KOG1552 Predicted alpha/beta h 67.6 19 0.0004 33.9 6.7 111 77-227 56-166 (258)
125 PF06342 DUF1057: Alpha/beta h 67.2 72 0.0016 30.6 10.6 100 79-223 33-136 (297)
126 PLN02429 triosephosphate isome 63.9 14 0.00031 35.7 5.4 62 154-227 237-299 (315)
127 KOG2281 Dipeptidyl aminopeptid 63.8 17 0.00038 38.5 6.3 110 80-228 641-766 (867)
128 COG2945 Predicted hydrolase of 63.7 7.5 0.00016 35.0 3.2 57 136-200 69-125 (210)
129 PLN02753 triacylglycerol lipas 63.6 17 0.00036 37.7 6.1 72 154-225 286-360 (531)
130 PRK11071 esterase YqiA; Provis 63.3 8.4 0.00018 34.1 3.6 34 162-198 48-81 (190)
131 TIGR01836 PHA_synth_III_C poly 63.2 10 0.00022 36.9 4.4 55 159-227 120-174 (350)
132 KOG2183 Prolylcarboxypeptidase 62.9 15 0.00033 36.9 5.5 65 127-195 112-184 (492)
133 PLN02561 triosephosphate isome 62.4 17 0.00036 34.2 5.5 61 154-226 178-239 (253)
134 PLN02408 phospholipase A1 62.1 18 0.00039 35.8 5.9 46 156-202 179-224 (365)
135 PLN02802 triacylglycerol lipas 61.5 17 0.00036 37.5 5.7 63 156-224 309-371 (509)
136 PLN02847 triacylglycerol lipas 61.3 13 0.00029 39.0 5.0 60 153-221 225-288 (633)
137 PF01083 Cutinase: Cutinase; 61.0 9.9 0.00022 33.5 3.6 82 128-226 41-125 (179)
138 PLN00413 triacylglycerol lipas 60.6 9.8 0.00021 38.9 3.8 39 160-201 269-307 (479)
139 PLN02934 triacylglycerol lipas 60.0 21 0.00046 36.8 6.1 40 159-201 305-344 (515)
140 PLN02719 triacylglycerol lipas 59.4 14 0.00031 38.0 4.8 71 155-225 273-346 (518)
141 PLN02324 triacylglycerol lipas 57.8 17 0.00037 36.6 4.9 70 155-225 193-266 (415)
142 COG2272 PnbA Carboxylesterase 57.8 70 0.0015 32.9 9.3 33 162-195 165-197 (491)
143 PF07819 PGAP1: PGAP1-like pro 57.7 56 0.0012 29.9 8.1 36 155-190 60-97 (225)
144 PF05448 AXE1: Acetyl xylan es 57.4 26 0.00055 34.0 6.0 144 64-226 66-211 (320)
145 PLN03082 Iron-sulfur cluster a 56.1 7 0.00015 34.2 1.7 63 79-142 76-144 (163)
146 PF05057 DUF676: Putative seri 55.4 17 0.00037 32.9 4.2 49 153-202 54-102 (217)
147 PTZ00333 triosephosphate isome 54.6 27 0.00059 32.8 5.5 61 154-226 181-242 (255)
148 KOG2182 Hydrolytic enzymes of 54.5 44 0.00096 34.4 7.2 44 152-195 146-189 (514)
149 PLN02310 triacylglycerol lipas 54.4 26 0.00057 35.2 5.6 64 156-225 186-250 (405)
150 PLN02162 triacylglycerol lipas 54.1 16 0.00035 37.3 4.1 40 159-201 262-301 (475)
151 PF08538 DUF1749: Protein of u 54.0 23 0.0005 34.1 5.0 73 153-231 82-155 (303)
152 cd00311 TIM Triosephosphate is 53.6 33 0.00072 31.9 5.9 59 155-226 175-234 (242)
153 PF08840 BAAT_C: BAAT / Acyl-C 52.8 7.3 0.00016 35.3 1.4 34 167-200 11-44 (213)
154 PRK00042 tpiA triosephosphate 52.5 38 0.00083 31.7 6.1 61 154-227 178-239 (250)
155 KOG3079 Uridylate kinase/adeny 52.3 8 0.00017 34.6 1.4 16 79-94 5-20 (195)
156 KOG3101 Esterase D [General fu 52.0 95 0.0021 28.7 8.2 181 51-255 8-206 (283)
157 PLN02761 lipase class 3 family 51.5 40 0.00086 35.0 6.4 71 155-225 268-343 (527)
158 PF07849 DUF1641: Protein of u 51.4 4.8 0.0001 26.8 -0.0 17 329-345 15-31 (42)
159 PF07519 Tannase: Tannase and 50.7 30 0.00066 35.5 5.6 88 155-257 96-192 (474)
160 TIGR01838 PHA_synth_I poly(R)- 50.5 86 0.0019 32.8 8.9 84 128-227 222-305 (532)
161 PRK04940 hypothetical protein; 50.3 17 0.00036 32.4 3.2 37 178-228 60-96 (180)
162 KOG4569 Predicted lipase [Lipi 50.2 28 0.00061 33.9 5.1 59 159-224 155-213 (336)
163 COG0429 Predicted hydrolase of 47.7 29 0.00064 33.9 4.6 121 64-223 60-185 (345)
164 PLN03037 lipase class 3 family 47.1 39 0.00084 35.0 5.6 46 157-202 296-342 (525)
165 KOG1553 Predicted alpha/beta h 46.8 48 0.001 32.8 5.8 61 148-226 286-346 (517)
166 COG3319 Thioesterase domains o 46.7 55 0.0012 30.8 6.2 59 153-225 46-104 (257)
167 PRK14565 triosephosphate isome 45.5 38 0.00082 31.5 4.9 55 153-227 171-225 (237)
168 PF05576 Peptidase_S37: PS-10 44.6 93 0.002 31.5 7.6 88 78-191 60-147 (448)
169 COG4757 Predicted alpha/beta h 43.8 47 0.001 31.1 5.0 65 128-197 59-124 (281)
170 KOG2984 Predicted hydrolase [G 43.2 35 0.00077 31.2 4.1 102 64-198 30-134 (277)
171 PF00681 Plectin: Plectin repe 41.6 19 0.00042 24.1 1.7 33 221-253 11-43 (45)
172 PF00756 Esterase: Putative es 40.2 58 0.0013 29.4 5.3 55 158-227 99-153 (251)
173 KOG2541 Palmitoyl protein thio 39.6 52 0.0011 31.3 4.7 91 78-199 21-113 (296)
174 PF02450 LCAT: Lecithin:choles 38.5 60 0.0013 32.3 5.5 41 156-200 101-141 (389)
175 PF04414 tRNA_deacylase: D-ami 37.9 79 0.0017 28.9 5.6 47 153-202 105-152 (213)
176 KOG3724 Negative regulator of 37.3 48 0.001 36.1 4.6 93 83-192 91-196 (973)
177 PF03583 LIP: Secretory lipase 37.1 90 0.002 29.7 6.2 66 155-226 45-115 (290)
178 PF12740 Chlorophyllase2: Chlo 37.0 50 0.0011 31.1 4.3 64 153-224 62-131 (259)
179 PRK09504 sufA iron-sulfur clus 36.9 40 0.00086 27.8 3.3 64 81-145 39-108 (122)
180 COG2819 Predicted hydrolase of 36.9 2.8E+02 0.006 26.3 9.2 55 158-224 113-172 (264)
181 TIGR01911 HesB_rel_seleno HesB 36.8 37 0.00081 26.5 2.9 17 83-100 28-44 (92)
182 PRK09502 iscA iron-sulfur clus 35.3 45 0.00098 26.7 3.3 63 82-145 25-93 (107)
183 PF03403 PAF-AH_p_II: Platelet 35.2 19 0.00042 35.8 1.3 38 179-228 229-266 (379)
184 PRK11190 Fe/S biogenesis prote 34.2 72 0.0016 28.6 4.7 63 83-146 25-95 (192)
185 PRK13962 bifunctional phosphog 33.9 70 0.0015 34.2 5.2 62 154-227 573-635 (645)
186 PF12532 DUF3732: Protein of u 32.3 68 0.0015 28.8 4.2 61 126-187 100-167 (193)
187 PF09292 Neil1-DNA_bind: Endon 32.1 28 0.0006 22.6 1.2 12 81-92 24-35 (39)
188 KOG1516 Carboxylesterase and r 32.0 3E+02 0.0066 28.2 9.7 34 162-196 180-213 (545)
189 COG4782 Uncharacterized protei 31.6 66 0.0014 31.9 4.3 48 177-227 190-237 (377)
190 PRK03995 hypothetical protein; 31.2 88 0.0019 29.6 4.9 47 153-202 157-203 (267)
191 PF00121 TIM: Triosephosphate 31.1 20 0.00042 33.5 0.5 62 154-227 176-238 (244)
192 TIGR00419 tim triosephosphate 30.8 1E+02 0.0023 27.9 5.2 55 155-226 150-204 (205)
193 COG0627 Predicted esterase [Ge 30.2 1.2E+02 0.0025 29.5 5.8 130 80-227 52-190 (316)
194 KOG3877 NADH:ubiquinone oxidor 29.6 61 0.0013 31.1 3.5 51 123-191 67-117 (393)
195 TIGR03341 YhgI_GntY IscR-regul 28.9 1.1E+02 0.0024 27.3 5.0 64 82-146 23-94 (190)
196 KOG2382 Predicted alpha/beta h 28.5 1.2E+02 0.0025 29.6 5.3 53 128-189 82-134 (315)
197 PF06821 Ser_hydrolase: Serine 28.0 61 0.0013 28.3 3.1 39 177-225 54-92 (171)
198 PF15613 WHIM2: WSTF, HB1, Itc 27.9 1.1E+02 0.0025 19.9 3.6 26 66-92 12-38 (38)
199 PF04446 Thg1: tRNAHis guanyly 27.6 77 0.0017 26.8 3.5 52 128-186 22-73 (135)
200 PRK15492 triosephosphate isome 27.2 1.3E+02 0.0029 28.3 5.4 61 154-227 187-248 (260)
201 PF07389 DUF1500: Protein of u 26.9 48 0.001 25.9 1.9 27 159-187 7-33 (100)
202 COG0149 TpiA Triosephosphate i 26.7 1.8E+02 0.0038 27.4 6.0 74 129-228 162-239 (251)
203 PF05887 Trypan_PARP: Procycli 26.4 22 0.00047 29.9 0.0 25 1-25 1-26 (143)
204 TIGR02011 IscA iron-sulfur clu 25.9 69 0.0015 25.5 2.8 63 81-144 22-90 (105)
205 COG3673 Uncharacterized conser 25.1 65 0.0014 31.5 2.9 65 127-197 66-141 (423)
206 KOG2369 Lecithin:cholesterol a 24.6 83 0.0018 32.2 3.6 44 156-199 159-203 (473)
207 COG3208 GrsT Predicted thioest 24.3 93 0.002 29.0 3.7 64 128-202 35-98 (244)
208 PF09949 DUF2183: Uncharacteri 24.1 2.7E+02 0.0058 22.1 5.9 40 160-204 50-89 (100)
209 PRK06762 hypothetical protein; 24.0 44 0.00096 28.4 1.5 13 82-94 2-14 (166)
210 PLN02517 phosphatidylcholine-s 23.4 1.3E+02 0.0028 32.0 4.9 35 161-198 199-233 (642)
211 COG3571 Predicted hydrolase of 23.4 1E+02 0.0023 27.2 3.6 27 174-200 85-111 (213)
212 KOG4540 Putative lipase essent 22.6 41 0.00089 32.3 1.0 34 162-195 260-293 (425)
213 COG5153 CVT17 Putative lipase 22.6 41 0.00089 32.3 1.0 34 162-195 260-293 (425)
214 PF10929 DUF2811: Protein of u 22.6 86 0.0019 22.5 2.4 22 157-178 6-27 (57)
215 PF03959 FSH1: Serine hydrolas 22.1 66 0.0014 28.8 2.3 62 158-226 86-147 (212)
216 PF06309 Torsin: Torsin; Inte 22.0 72 0.0016 26.7 2.3 17 78-94 49-65 (127)
217 COG1075 LipA Predicted acetylt 20.7 1.3E+02 0.0029 29.2 4.2 45 153-200 105-149 (336)
218 PF08060 NOSIC: NOSIC (NUC001) 20.7 77 0.0017 22.0 1.9 22 155-176 13-35 (53)
219 PRK07868 acyl-CoA synthetase; 20.4 2.9E+02 0.0062 31.1 7.3 39 178-226 141-179 (994)
220 COG3545 Predicted esterase of 20.2 2.2E+02 0.0048 25.3 5.0 50 159-223 44-93 (181)
221 KOG3372 Signal peptidase compl 20.2 3.7E+02 0.008 23.7 6.3 14 2-15 5-18 (176)
No 1
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=100.00 E-value=7.1e-91 Score=688.07 Aligned_cols=307 Identities=48% Similarity=0.927 Sum_probs=275.0
Q ss_pred cccccCceecCCCCCC-CCceEEEEEEEecCCCCceEEEEEEeccCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEc
Q 018329 32 TEADADRVRDLPGQPK-VEFKHYAGYVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVG 110 (358)
Q Consensus 32 ~~~~~~~v~~lpg~~~-~~~~~ysGyl~v~~~~~~~lfywf~~s~~~~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~ 110 (358)
..+++++|+.|||++. ++|++|||||+|+++.+++||||||||+++|++|||||||||||||||++ |+|.|+|||+++
T Consensus 23 ~~~~~~~I~~LPG~~~~~~f~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~ 101 (454)
T KOG1282|consen 23 HVDEADLIKSLPGQPGPLPFKQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVK 101 (454)
T ss_pred ccchhhhhhcCCCCCCCCCcccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEc
Confidence 3458899999999985 89999999999998889999999999999999999999999999999996 999999999999
Q ss_pred CCCCeeecCCCCcccccceeEeecCcccccccccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCc
Q 018329 111 GNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGH 190 (358)
Q Consensus 111 ~~~~~l~~n~~sW~~~an~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~ 190 (358)
.||.+|..||||||+.||||||||||||||||+++..++.+ +|+.+|+|++.||++||++||||++|+|||+|||||||
T Consensus 102 ~~G~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~-~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~ 180 (454)
T KOG1282|consen 102 YNGKTLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYKT-GDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGH 180 (454)
T ss_pred CCCCcceeCCccccccccEEEEecCCcCCccccCCCCcCcC-CcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccce
Confidence 99999999999999999999999999999999999888876 99999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCCCCCCcchhhhhhhcccCCHHHHHHHHhhccCCC------CCCch
Q 018329 191 YVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQ------SMIRS 264 (358)
Q Consensus 191 yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~~~q~~~~~~~~~~~gli~~~~~~~~~~~C~~~~------~~~~~ 264 (358)
|||+||++|+++|+.. ..+.|||||++||||++|+..|..++++|++.||+|++++++.+++.|.... ...+.
T Consensus 181 YVP~La~~I~~~N~~~-~~~~iNLkG~~IGNg~td~~~~~~~~~~~a~~h~liSde~~~~l~~~C~~~~~~~~~~~~~~~ 259 (454)
T KOG1282|consen 181 YVPALAQEILKGNKKC-CKPNINLKGYAIGNGLTDPEIDYNGRIPFAWGHGLISDELYESLKRACDFSSDNYANVDPSNT 259 (454)
T ss_pred ehHHHHHHHHhccccc-cCCcccceEEEecCcccCccccccchhhhhhhcccCCHHHHHHHHHHhccCcccccccCCchh
Confidence 9999999999998753 3478999999999999999999999999999999999999999999998732 23467
Q ss_pred hhHHHHhhHh-hhcCCCCccccccccCcCCCCCCCCCccccCCccccccccccCCCCCCCCCCcchHhhcCChHHHHHhh
Q 018329 265 NCNDHIRGFV-EAYAEIDIYSIYSPVCLDSLDGKAPPKLMVAPHLLTQHDLWHRLPSGYDPCAEDYVMKFFNREDVQRAL 343 (358)
Q Consensus 265 ~C~~~~~~~~-~~~~~iN~YdI~~~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~pC~~~~~~~YLN~pdVqkAL 343 (358)
+|.++++.+. ...++++.|+|+.+.|...... . + ......++++|.+++.++|||+|+||+||
T Consensus 260 ~C~~~~~~~~~~~~~~i~~y~i~~~~C~~~~~~-----~----~-------~~~~~~~~~~c~~~~~~~ylN~~~VrkAL 323 (454)
T KOG1282|consen 260 KCNKAVEEFDSKTTGDIDNYYILTPDCYPTSYE-----L----K-------KPTDCYGYDPCLSDYAEKYLNRPEVRKAL 323 (454)
T ss_pred HHHHHHHHHHHHHhccCchhhhcchhhcccccc-----c----c-------ccccccccCCchhhhHHHhcCCHHHHHHh
Confidence 9999999998 5557999999999999752100 0 0 01112456899988779999999999999
Q ss_pred CCCCCCCCCCcccCC
Q 018329 344 HANITKLSYPYTTCR 358 (358)
Q Consensus 344 hV~~~~~~~~W~~Cs 358 (358)
||+.+..+ +|++||
T Consensus 324 h~~~~~~~-~W~~Cn 337 (454)
T KOG1282|consen 324 HANKTSIG-KWERCN 337 (454)
T ss_pred CCCCCCCC-cccccC
Confidence 99986544 799997
No 2
>PLN02209 serine carboxypeptidase
Probab=100.00 E-value=2.4e-76 Score=588.79 Aligned_cols=298 Identities=29% Similarity=0.541 Sum_probs=254.1
Q ss_pred ccccCceecCCCCC-CCCceEEEEEEEecCCCCceEEEEEEeccCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcC
Q 018329 33 EADADRVRDLPGQP-KVEFKHYAGYVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGG 111 (358)
Q Consensus 33 ~~~~~~v~~lpg~~-~~~~~~ysGyl~v~~~~~~~lfywf~~s~~~~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~ 111 (358)
.+..|+|++|||++ .+++++||||++|+++.++++|||||||+++|+++||+|||||||||||+ +|+|.|+|||+++.
T Consensus 19 ~~~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~-~g~f~e~GP~~~~~ 97 (437)
T PLN02209 19 VRSGSIVKFLPGFKGPLPFELETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCL-SGLFFENGPLALKN 97 (437)
T ss_pred CCccCeeecCCCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHh-hhHHHhcCCceecc
Confidence 34678899999995 58999999999999876789999999999999999999999999999999 69999999999987
Q ss_pred CC-----CeeecCCCCcccccceeEeecCcccccccccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccc
Q 018329 112 NG-----SRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGES 186 (358)
Q Consensus 112 ~~-----~~l~~n~~sW~~~an~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeS 186 (358)
++ .++++||+||++.|||||||||+||||||+.+...+. +++++|+++++||+.||++||+|+++|+||+|||
T Consensus 98 ~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~--~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GES 175 (437)
T PLN02209 98 KVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIERT--SDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDS 175 (437)
T ss_pred CCCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCcc--CCHHHHHHHHHHHHHHHHhCccccCCCEEEEecC
Confidence 63 3789999999999999999999999999987654443 5677889999999999999999999999999999
Q ss_pred cCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCCCCCCcchhhhhhhcccCCHHHHHHHHhhccCC---CCCCc
Q 018329 187 YAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFG---QSMIR 263 (358)
Q Consensus 187 YgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~~~q~~~~~~~~~~~gli~~~~~~~~~~~C~~~---~~~~~ 263 (358)
|||||||.+|++|+++|.+. ..++||||||+|||||+||..|..++++|++.+|+|++++++.+++.|... ....+
T Consensus 176 YaG~yvP~~a~~i~~~~~~~-~~~~inl~Gi~igng~td~~~q~~~~~~y~~~~glI~~~~~~~~~~~c~~~~~~~~~~~ 254 (437)
T PLN02209 176 YSGMIVPALVHEISKGNYIC-CNPPINLQGYVLGNPITHIEFEQNFRIPYAHGMSLISDELYESLKRICKGNYFSVDPSN 254 (437)
T ss_pred cCceehHHHHHHHHhhcccc-cCCceeeeeEEecCcccChhhhhhhHHHHHhccCCCCHHHHHHHHHhcccccccCCCCh
Confidence 99999999999999987542 346899999999999999999999999999999999999999999999642 12346
Q ss_pred hhhHHHHhhHhhhcCCCCccccccccCcCCCCCCCCCccccCCccccccccccCCCCCCCCCCc---chHhhcCChHHHH
Q 018329 264 SNCNDHIRGFVEAYAEIDIYSIYSPVCLDSLDGKAPPKLMVAPHLLTQHDLWHRLPSGYDPCAE---DYVMKFFNREDVQ 340 (358)
Q Consensus 264 ~~C~~~~~~~~~~~~~iN~YdI~~~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~pC~~---~~~~~YLN~pdVq 340 (358)
..|.+++.++......+|+|+++.+.|...... ....+|.+ ..+..|||+|+||
T Consensus 255 ~~C~~~i~~~~~~~~~~~~~~~~~~~c~~~~~~-----------------------~~~~~c~~~~~~~~~~ylN~~~V~ 311 (437)
T PLN02209 255 KKCLKLVEEYHKCTDNINSHHTLIANCDDSNTQ-----------------------HISPDCYYYPYHLVECWANNESVR 311 (437)
T ss_pred HHHHHHHHHHHHHhhcCCccccccccccccccc-----------------------cCCCCcccccHHHHHHHhCCHHHH
Confidence 689999888776677889988665568542100 01135643 3578999999999
Q ss_pred HhhCCCCCCCCCCcccCC
Q 018329 341 RALHANITKLSYPYTTCR 358 (358)
Q Consensus 341 kALhV~~~~~~~~W~~Cs 358 (358)
+||||+... ...|..|+
T Consensus 312 ~aL~v~~~~-~~~w~~~~ 328 (437)
T PLN02209 312 EALHVDKGS-IGEWIRDH 328 (437)
T ss_pred HHhCCCCCC-CCCCcccc
Confidence 999998532 34799995
No 3
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=100.00 E-value=5.9e-76 Score=585.80 Aligned_cols=294 Identities=31% Similarity=0.591 Sum_probs=253.3
Q ss_pred ccCceecCCCCC-CCCceEEEEEEEecCCCCceEEEEEEeccCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCC-
Q 018329 35 DADRVRDLPGQP-KVEFKHYAGYVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGN- 112 (358)
Q Consensus 35 ~~~~v~~lpg~~-~~~~~~ysGyl~v~~~~~~~lfywf~~s~~~~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~- 112 (358)
..+.|++|||+. .+++++|||||+|+++.+.++|||||||+++|+++||||||||||||||+ .|+|.|+|||+++.+
T Consensus 19 ~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~-~g~~~e~GP~~~~~~~ 97 (433)
T PLN03016 19 SASIVKFLPGFEGPLPFELETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCL-GGIIFENGPVGLKFEV 97 (433)
T ss_pred ccCeeecCcCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHH-HHHHHhcCCceeeccc
Confidence 457899999995 58899999999998766789999999999999999999999999999999 699999999998643
Q ss_pred ----CCeeecCCCCcccccceeEeecCcccccccccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccC
Q 018329 113 ----GSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYA 188 (358)
Q Consensus 113 ----~~~l~~n~~sW~~~an~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYg 188 (358)
..++++||+||++.|||||||||+||||||+++..++. +|+++|+++++||+.||++||+|+++|+||+|||||
T Consensus 98 ~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~--~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYa 175 (433)
T PLN03016 98 FNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDKT--GDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYS 175 (433)
T ss_pred cCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCcc--CCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCcc
Confidence 35789999999999999999999999999987655443 567778999999999999999999999999999999
Q ss_pred CccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCCCCCCcchhhhhhhcccCCHHHHHHHHhhccCCC---CCCchh
Q 018329 189 GHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQ---SMIRSN 265 (358)
Q Consensus 189 G~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~~~q~~~~~~~~~~~gli~~~~~~~~~~~C~~~~---~~~~~~ 265 (358)
|||||.+|++|+++|.+. .+++||||||+||||++||..|..++.+|++.||+|++++++.+++.|.... ......
T Consensus 176 G~yvP~la~~i~~~n~~~-~~~~inLkGi~iGNg~t~~~~~~~~~~~y~~~~glI~~~~~~~i~~~c~~~~~~~~~~~~~ 254 (433)
T PLN03016 176 GMIVPALVQEISQGNYIC-CEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQ 254 (433)
T ss_pred ceehHHHHHHHHhhcccc-cCCcccceeeEecCCCcCchhhhhhHHHHHHhcCCCCHHHHHHHHHHhccccccCCCchHH
Confidence 999999999999988643 3468999999999999999999999999999999999999999999997421 234678
Q ss_pred hHHHHhhHhhhcCCCCccccccccCcCCCCCCCCCccccCCccccccccccCCCCCCCCCCc---chHhhcCChHHHHHh
Q 018329 266 CNDHIRGFVEAYAEIDIYSIYSPVCLDSLDGKAPPKLMVAPHLLTQHDLWHRLPSGYDPCAE---DYVMKFFNREDVQRA 342 (358)
Q Consensus 266 C~~~~~~~~~~~~~iN~YdI~~~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~pC~~---~~~~~YLN~pdVqkA 342 (358)
|..++..+....+.+|+|||+.+.|.... . ..+.|.. ..+..|||+++||+|
T Consensus 255 C~~~~~~~~~~~~~~n~yni~~~~~~~~~-----------------------~--~~~~c~~~~~~~~~~ylN~~~V~~a 309 (433)
T PLN03016 255 CLKLTEEYHKCTAKINIHHILTPDCDVTN-----------------------V--TSPDCYYYPYHLIECWANDESVREA 309 (433)
T ss_pred HHHHHHHHHHHhcCCChhhccCCcccccc-----------------------c--CCCcccccchHHHHHHhCCHHHHHH
Confidence 99999888777889999999977563210 0 0135653 357899999999999
Q ss_pred hCCCCCCCCCCcccCC
Q 018329 343 LHANITKLSYPYTTCR 358 (358)
Q Consensus 343 LhV~~~~~~~~W~~Cs 358 (358)
|||++.. ..+|..|+
T Consensus 310 L~v~~~~-~~~w~~cn 324 (433)
T PLN03016 310 LHIEKGS-KGKWARCN 324 (433)
T ss_pred hCCCCCC-CCCCccCC
Confidence 9998532 24799997
No 4
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=100.00 E-value=1.9e-75 Score=580.05 Aligned_cols=293 Identities=40% Similarity=0.792 Sum_probs=234.1
Q ss_pred CCCCC-CCceEEEEEEEecCCCCceEEEEEEeccCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCC-CCeeecCC
Q 018329 43 PGQPK-VEFKHYAGYVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGN-GSRLKFNK 120 (358)
Q Consensus 43 pg~~~-~~~~~ysGyl~v~~~~~~~lfywf~~s~~~~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~-~~~l~~n~ 120 (358)
||+.. +++++|||||+++++.+.+||||||||+++|+++||||||||||||||| +|+|.|+|||+++.+ ..+++.||
T Consensus 1 pg~~~~~~~~~~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~-~g~f~e~GP~~~~~~~~~~l~~n~ 79 (415)
T PF00450_consen 1 PGLDEPVPFKQYSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSM-WGLFGENGPFRINPDGPYTLEDNP 79 (415)
T ss_dssp TT-SS-SSSEEEEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-TH-HHHHCTTSSEEEETTSTSEEEE-T
T ss_pred CCCCCCCCceEEEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccc-cccccccCceEEeecccccccccc
Confidence 78764 8899999999999777899999999999999999999999999999999 799999999999954 37899999
Q ss_pred CCcccccceeEeecCcccccccccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHH
Q 018329 121 YSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIH 200 (358)
Q Consensus 121 ~sW~~~an~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~ 200 (358)
+||+++|||||||||+||||||+....++.+ +++++|+++++||+.||++||+++++|+||+||||||||||.+|.+|+
T Consensus 80 ~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~-~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~ 158 (415)
T PF00450_consen 80 YSWNKFANLLFIDQPVGTGFSYGNDPSDYVW-NDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYIL 158 (415)
T ss_dssp T-GGGTSEEEEE--STTSTT-EESSGGGGS--SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHH
T ss_pred cccccccceEEEeecCceEEeeccccccccc-hhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhh
Confidence 9999999999999999999999987766665 899999999999999999999999999999999999999999999999
Q ss_pred HHhhccCCCceeeeeeeEeeccccCCCCCCcchhhhhhhcccCCHHHHHHHHhhccCC--CCCCchhhHHHHhhHhhh--
Q 018329 201 ERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFG--QSMIRSNCNDHIRGFVEA-- 276 (358)
Q Consensus 201 ~~~~~~~~~~~inLkGi~igng~~d~~~q~~~~~~~~~~~gli~~~~~~~~~~~C~~~--~~~~~~~C~~~~~~~~~~-- 276 (358)
+++.+. ..++||||||+||||++||..|..++.+|++.||+|++++++.+.+.|... .......|.++++.+...
T Consensus 159 ~~~~~~-~~~~inLkGi~IGng~~dp~~~~~s~~~~~~~~gli~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~ 237 (415)
T PF00450_consen 159 QQNKKG-DQPKINLKGIAIGNGWIDPRIQYNSYADYAYYHGLIDDQQYDDLNKACEACPQCQKAITECAAALDELSCQYA 237 (415)
T ss_dssp HHTCC---STTSEEEEEEEESE-SBHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHTTSHSSSCCHHHHHHHHHHHHHHCH
T ss_pred hccccc-cccccccccceecCccccccccceeecccccccCcccHHHHHHHHHHhhccccccchhhHHHHHHHhhhhhcc
Confidence 998653 236799999999999999999999999999999999999999999998642 124567899888887753
Q ss_pred ----cCCCCccccccccCcCCCCCCCCCccccCCccccccccccCCCCCCCCCCcchHhhcCChHHHHHhhCCCCCCCCC
Q 018329 277 ----YAEIDIYSIYSPVCLDSLDGKAPPKLMVAPHLLTQHDLWHRLPSGYDPCAEDYVMKFFNREDVQRALHANITKLSY 352 (358)
Q Consensus 277 ----~~~iN~YdI~~~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~pC~~~~~~~YLN~pdVqkALhV~~~~~~~ 352 (358)
.+++|+|||+.+ |....... .......+++....+..|||+++||+||||+... ..
T Consensus 238 ~~~~~~~~n~Ydi~~~-~~~~~~~~------------------~~~~~~~~~~~~~~~~~yln~~~Vr~aL~v~~~~-~~ 297 (415)
T PF00450_consen 238 ISQCNGGINPYDIRQP-CYNPSRSS------------------YDNSPSNDPPDDDYLEAYLNRPDVREALHVPVDS-NV 297 (415)
T ss_dssp HHHHHTTSETTSTTSE-ETT-SHCT------------------TCCCCTTTTTCHHHHHHHHTSHHHHHHTT-STTT-SS
T ss_pred cccccCCcceeeeecc-cccccccc------------------ccccccccccchhhHHHHhccHHHHHhhCCCccc-CC
Confidence 379999999998 63210000 0001122234446789999999999999997321 35
Q ss_pred CcccCC
Q 018329 353 PYTTCR 358 (358)
Q Consensus 353 ~W~~Cs 358 (358)
+|+.|+
T Consensus 298 ~w~~~~ 303 (415)
T PF00450_consen 298 NWQSCN 303 (415)
T ss_dssp S--SB-
T ss_pred cccccC
Confidence 899996
No 5
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=100.00 E-value=2.8e-70 Score=550.52 Aligned_cols=273 Identities=31% Similarity=0.672 Sum_probs=232.5
Q ss_pred CCCceEEEEEEEecC-CCCceEEEEEEeccCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCccc
Q 018329 47 KVEFKHYAGYVKLRP-NDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNK 125 (358)
Q Consensus 47 ~~~~~~ysGyl~v~~-~~~~~lfywf~~s~~~~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~ 125 (358)
+.++++|||||+|++ ..+.+||||||||+++|+++||+|||||||||||+ +|+|.|+|||+++.++.+++.||+||++
T Consensus 42 ~~~~~~~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~-~G~f~E~GP~~i~~~~~~~~~n~~sW~~ 120 (462)
T PTZ00472 42 DPSVNQWSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSM-FALLAENGPCLMNETTGDIYNNTYSWNN 120 (462)
T ss_pred CCCCcceeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHH-HhhhccCCCeEEeCCCCceeECCccccc
Confidence 357899999999975 44789999999999999999999999999999999 6999999999999987789999999999
Q ss_pred ccceeEeecCcccccccccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhc
Q 018329 126 AANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIR 205 (358)
Q Consensus 126 ~an~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~ 205 (358)
.+||||||||+||||||+... ++.. +++++|+|+++||+.||++||+++++++||+||||||+|+|.+|.+|+++|+.
T Consensus 121 ~~~~l~iDqP~G~G~S~~~~~-~~~~-~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~ 198 (462)
T PTZ00472 121 EAYVIYVDQPAGVGFSYADKA-DYDH-NESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKK 198 (462)
T ss_pred ccCeEEEeCCCCcCcccCCCC-CCCC-ChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccc
Confidence 999999999999999998653 4544 78999999999999999999999999999999999999999999999998865
Q ss_pred cCCCceeeeeeeEeeccccCCCCCCcchhhhhhh-------cccCCHHHHHHHHh---hc-------cCCCCCCchhhHH
Q 018329 206 AGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWS-------HAIISDKLYKDISK---EC-------DFGQSMIRSNCND 268 (358)
Q Consensus 206 ~~~~~~inLkGi~igng~~d~~~q~~~~~~~~~~-------~gli~~~~~~~~~~---~C-------~~~~~~~~~~C~~ 268 (358)
+ .+.+||||||+|||||+||..|..++.+|+|. +++|++++++.+++ .| ..........|..
T Consensus 199 ~-~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~~~~~~~~~li~~~~~~~~~~~~~~c~~~~~~c~~~~~~~~~~c~~ 277 (462)
T PTZ00472 199 G-DGLYINLAGLAVGNGLTDPYTQYASYPRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQKKIKECNSNPDDADSSCSV 277 (462)
T ss_pred c-CCceeeeEEEEEeccccChhhhcccHHHHhhhcccccCCCCccCHHHHHHHHHHHHHHHHHHHhccccCCCcchHHHH
Confidence 3 34689999999999999999999999999985 57999999988864 34 3211123345655
Q ss_pred HHhhHhhh-----cCCCCccccccccCcCCCCCCCCCccccCCccccccccccCCCCCCCCCCc-chHhhcCChHHHHHh
Q 018329 269 HIRGFVEA-----YAEIDIYSIYSPVCLDSLDGKAPPKLMVAPHLLTQHDLWHRLPSGYDPCAE-DYVMKFFNREDVQRA 342 (358)
Q Consensus 269 ~~~~~~~~-----~~~iN~YdI~~~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~pC~~-~~~~~YLN~pdVqkA 342 (358)
+...|... .+++|+|||+.+ |.. ++|.+ ..+.+|||+|+||+|
T Consensus 278 a~~~c~~~~~~~~~~g~n~Ydi~~~-c~~------------------------------~~c~~~~~~~~yLN~~~Vq~A 326 (462)
T PTZ00472 278 ARALCNEYIAVYSATGLNNYDIRKP-CIG------------------------------PLCYNMDNTIAFMNREDVQSS 326 (462)
T ss_pred HHHHHHHHHHHHHhcCCChhheecc-CCC------------------------------CCccCHHHHHHHhCCHHHHHH
Confidence 54443321 367999999987 732 25754 468999999999999
Q ss_pred hCCCCCCCCCCcccCC
Q 018329 343 LHANITKLSYPYTTCR 358 (358)
Q Consensus 343 LhV~~~~~~~~W~~Cs 358 (358)
|||+. .+|+.|+
T Consensus 327 L~v~~----~~w~~c~ 338 (462)
T PTZ00472 327 LGVKP----ATWQSCN 338 (462)
T ss_pred hCCCC----CCceeCC
Confidence 99974 3799996
No 6
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=100.00 E-value=5.3e-53 Score=414.76 Aligned_cols=270 Identities=29% Similarity=0.528 Sum_probs=212.8
Q ss_pred CceEEEEEEEecCCCCceEEEEEEeccCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeee-cCCCCccccc
Q 018329 49 EFKHYAGYVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLK-FNKYSWNKAA 127 (358)
Q Consensus 49 ~~~~ysGyl~v~~~~~~~lfywf~~s~~~~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~-~n~~sW~~~a 127 (358)
++++|+||.... ..+|||+|+++++|.++|+||||||||||||+ +|+|.|+||++|+.+..... .||+||++++
T Consensus 73 pv~~~~g~~d~e----d~~ffy~fe~~ndp~~rPvi~wlNGGPGcSS~-~g~l~elGP~rI~~~~~P~~~~NP~SW~~~a 147 (498)
T COG2939 73 PVRDYTGYPDAE----DFFFFYTFESPNDPANRPVIFWLNGGPGCSSV-TGLLGELGPKRIQSGTSPSYPDNPGSWLDFA 147 (498)
T ss_pred chhhccCCcccc----eeEEEEEecCCCCCCCCceEEEecCCCChHhh-hhhhhhcCCeeeeCCCCCCCCCCccccccCC
Confidence 345555553221 23899999999999999999999999999999 69999999999998842222 6999999999
Q ss_pred ceeEeecCcccccccccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCC--CeEEeccccCCccHHHHHHHHHHHhhc
Q 018329 128 NMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSH--DFYIAGESYAGHYVPQLAELIHERNIR 205 (358)
Q Consensus 128 n~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~--~~yi~GeSYgG~yvp~la~~i~~~~~~ 205 (358)
||||||||+||||||+.. ..... +...+.+|++.|++.||+.||++.+. ++||+||||||+|+|.||+.|++++..
T Consensus 148 dLvFiDqPvGTGfS~a~~-~e~~~-d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~ 225 (498)
T COG2939 148 DLVFIDQPVGTGFSRALG-DEKKK-DFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIA 225 (498)
T ss_pred ceEEEecCcccCcccccc-ccccc-chhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccc
Confidence 999999999999999722 22333 67788999999999999999999988 999999999999999999999998633
Q ss_pred cCCCceeeeeeeEeecc-ccCCCCCCcchhhhhhhc----ccCCHHHHHHHHhhccCC----------CCCCchhhHHHH
Q 018329 206 AGKDSFINLKGFMIGNA-VINDPTDTKGLVDYAWSH----AIISDKLYKDISKECDFG----------QSMIRSNCNDHI 270 (358)
Q Consensus 206 ~~~~~~inLkGi~igng-~~d~~~q~~~~~~~~~~~----gli~~~~~~~~~~~C~~~----------~~~~~~~C~~~~ 270 (358)
..-.+||++++|||| +|||..|+..|.+++... +..+.+.++.+.+.|... +......|..+.
T Consensus 226 --~~~~~nlssvligng~~t~Pl~~~~~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d~~~~l~~g~~~~~~~~~c~~~~ 303 (498)
T COG2939 226 --LNGNVNLSSVLIGNGLWTDPLTQYLTYEPIAAEKGPYDGVLSSEECTKAEKYCAGDYCLALMKGCYDSGSLQPCENAS 303 (498)
T ss_pred --cCCceEeeeeeecCCcccChhHHHHHhhhhHhhcCCCCCcCcHHHHHHHHHHhhhhhHhhhccCCCCchhhhHHHHHH
Confidence 234699999999999 999999999999999854 456677788888877642 123345687777
Q ss_pred hhHhhhc------CC---CCccccccccCcCCCCCCCCCccccCCccccccccccCCCCCCCCCCcc--hHhhcCChHHH
Q 018329 271 RGFVEAY------AE---IDIYSIYSPVCLDSLDGKAPPKLMVAPHLLTQHDLWHRLPSGYDPCAED--YVMKFFNREDV 339 (358)
Q Consensus 271 ~~~~~~~------~~---iN~YdI~~~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~pC~~~--~~~~YLN~pdV 339 (358)
..+.... .+ .|+|+|+.. |..... ...|++. ++..|+|.+.+
T Consensus 304 ~~~~~~~~~~~~r~~~~~~n~y~~r~~-~~d~g~--------------------------~~~~y~~~~~~ld~~~~~~~ 356 (498)
T COG2939 304 AYLTGLMREYVGRAGGRLLNVYDIREE-CRDPGL--------------------------GGSCYDTLSTSLDYFNFDPE 356 (498)
T ss_pred HHHHhcchhhhccccccccccccchhh-cCCCCc--------------------------ccccccceeeccccccccch
Confidence 7665432 24 899999986 864210 0145543 56788888888
Q ss_pred HHhhCCCCCCCCCCcccCC
Q 018329 340 QRALHANITKLSYPYTTCR 358 (358)
Q Consensus 340 qkALhV~~~~~~~~W~~Cs 358 (358)
|++++...+ +|..|+
T Consensus 357 ~~~~~~~~d----~~~~c~ 371 (498)
T COG2939 357 QEVNDPEVD----NISGCT 371 (498)
T ss_pred hcccccccc----chhccc
Confidence 888877643 687774
No 7
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=100.00 E-value=2.5e-47 Score=367.96 Aligned_cols=204 Identities=29% Similarity=0.542 Sum_probs=170.3
Q ss_pred ccceeEeecCcccccccccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhc
Q 018329 126 AANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIR 205 (358)
Q Consensus 126 ~an~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~ 205 (358)
.|||||||||+||||||+++..++. +|+++|+|++.||+.||++||+|+++||||+||||||||||.||++|++.|.+
T Consensus 1 ~aNvLfiDqPvGvGfSy~~~~~~~~--~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~ 78 (319)
T PLN02213 1 MANIIFLDQPVGSGFSYSKTPIDKT--GDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYI 78 (319)
T ss_pred CccEEEecCCCCCCCCCCCCCCCcc--ccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhccc
Confidence 4899999999999999987655543 67777899999999999999999999999999999999999999999988764
Q ss_pred cCCCceeeeeeeEeeccccCCCCCCcchhhhhhhcccCCHHHHHHHHhhccCCC---CCCchhhHHHHhhHhhhcCCCCc
Q 018329 206 AGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQ---SMIRSNCNDHIRGFVEAYAEIDI 282 (358)
Q Consensus 206 ~~~~~~inLkGi~igng~~d~~~q~~~~~~~~~~~gli~~~~~~~~~~~C~~~~---~~~~~~C~~~~~~~~~~~~~iN~ 282 (358)
. ++++||||||+|||||++|..|..++.+|++.||+|++++++.+++.|.... ......|.+++..+....+.+|+
T Consensus 79 ~-~~~~inLkGi~IGNg~t~~~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~ 157 (319)
T PLN02213 79 C-CEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLKLTEEYHKCTAKINI 157 (319)
T ss_pred c-cCCceeeeEEEeCCCCCCccccchhHhhHHHhcCCCCHHHHHHHHHhcCCCccCCCCCcHHHHHHHHHHHHHHhcCCH
Confidence 3 3467999999999999999999999999999999999999999999996421 13466899998888777788999
Q ss_pred cccccccCcCCCCCCCCCccccCCccccccccccCCCCCCCCCCc---chHhhcCChHHHHHhhCCCCCCCCCCcccCC
Q 018329 283 YSIYSPVCLDSLDGKAPPKLMVAPHLLTQHDLWHRLPSGYDPCAE---DYVMKFFNREDVQRALHANITKLSYPYTTCR 358 (358)
Q Consensus 283 YdI~~~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~pC~~---~~~~~YLN~pdVqkALhV~~~~~~~~W~~Cs 358 (358)
||++.+.|... +. ..+.|.+ ..+..|||+++||+||||+... ..+|+.||
T Consensus 158 ~~~~~~~~~~~-----------------------~~--~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~-~~~w~~c~ 210 (319)
T PLN02213 158 HHILTPDCDVT-----------------------NV--TSPDCYYYPYHLIECWANDESVREALHIEKGS-KGKWARCN 210 (319)
T ss_pred hhcccCcccCc-----------------------cC--CCCCcccchhHHHHHHhCCHHHHHHhCcCCCC-CCCCccCC
Confidence 99997656321 00 0135653 3679999999999999997531 24799997
No 8
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.5e-43 Score=326.45 Aligned_cols=283 Identities=25% Similarity=0.427 Sum_probs=215.1
Q ss_pred EEEEEEecCCCCceEEEEEEeccCC-CCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeE
Q 018329 53 YAGYVKLRPNDHKALFYWFFEAQKG-VSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLF 131 (358)
Q Consensus 53 ysGyl~v~~~~~~~lfywf~~s~~~-~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~ 131 (358)
-.||++++. +.|+|+|++.+..+ ...+|+.|||+||||.||..+|+|.|+||...+. .+|+++|.+.|+|||
T Consensus 4 ~wg~v~vr~--~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~-----~~r~~TWlk~adllf 76 (414)
T KOG1283|consen 4 DWGYVDVRT--GAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLDG-----SPRDWTWLKDADLLF 76 (414)
T ss_pred cccceeeec--CceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccCC-----CcCCchhhhhccEEE
Confidence 358999984 78999999988643 4779999999999999999899999999998764 469999999999999
Q ss_pred eecCcccccccccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCce
Q 018329 132 LEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSF 211 (358)
Q Consensus 132 iDqP~G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~ 211 (358)
||.|||+||||.+..+-|.+ +++++|.|+.+.|+.||..||||+.+||||+-|||||+..+.+|..+....++ ...+
T Consensus 77 vDnPVGaGfSyVdg~~~Y~~-~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~--G~i~ 153 (414)
T KOG1283|consen 77 VDNPVGAGFSYVDGSSAYTT-NNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKR--GEIK 153 (414)
T ss_pred ecCCCcCceeeecCcccccc-cHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhc--Ccee
Confidence 99999999999988877877 99999999999999999999999999999999999999999999999988776 3578
Q ss_pred eeeeeeEeeccccCCCCCCcchhhhhhhcccCCHHHHHHHHh---hccCC--C---CCCchhhHHHHhhHhhhcCCCCcc
Q 018329 212 INLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISK---ECDFG--Q---SMIRSNCNDHIRGFVEAYAEIDIY 283 (358)
Q Consensus 212 inLkGi~igng~~d~~~q~~~~~~~~~~~gli~~~~~~~~~~---~C~~~--~---~~~~~~C~~~~~~~~~~~~~iN~Y 283 (358)
.|+.|+++|+.||+|..-..++.+|++..+++++...+...+ +|... . ...+......-+.+.....++|.|
T Consensus 154 ~nf~~VaLGDSWISP~D~V~SWGP~L~~~S~LDD~GLds~ns~A~k~~~~v~~g~~~~AT~~Wg~~e~li~~~sn~VdfY 233 (414)
T KOG1283|consen 154 LNFIGVALGDSWISPEDFVFSWGPLLKHVSRLDDNGLDSSNSGAEKGKGGVDGGKWGGATGGWGGGENLISRESNGVDFY 233 (414)
T ss_pred ecceeEEccCcccChhHhhhcchHHHHhhhhhcccCccchhhhHHhhcccccCCccccccccccCcCcceeecccCccee
Confidence 999999999999999999999999999999999887766543 44321 0 122222223334445566789999
Q ss_pred ccccccCcCCCCCCCCCccccCCccccccccccCCCCCC-CCCCcchHhhcCChHHHHHhhCCCCCCCCCCcc
Q 018329 284 SIYSPVCLDSLDGKAPPKLMVAPHLLTQHDLWHRLPSGY-DPCAEDYVMKFFNREDVQRALHANITKLSYPYT 355 (358)
Q Consensus 284 dI~~~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~-~pC~~~~~~~YLN~pdVqkALhV~~~~~~~~W~ 355 (358)
||..+.-.+....+ .++.+ +.+..+ +++.... .+-..+.+.+++|-| ||++|++.+++ ..|-
T Consensus 234 Nil~~t~~d~~~~s-s~~~~-~~~~~~-----rrl~~~~~~~~~~D~L~~lM~g~-vrkkLgIip~~--~~wG 296 (414)
T KOG1283|consen 234 NILTKTLGDQYSLS-SRAAM-TPEEVM-----RRLLVRFVGDEDRDKLSDLMNGP-VRKKLGIIPGG--VKWG 296 (414)
T ss_pred eeeccCCCcchhhh-hhhhc-chHHHH-----HHHHhccCcchhHHHHHHHhccc-ccccccccCCC--Cccc
Confidence 99987332221110 00000 010000 0110000 011124578888876 89999998754 3563
No 9
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=98.38 E-value=1.8e-06 Score=78.35 Aligned_cols=116 Identities=19% Similarity=0.182 Sum_probs=77.3
Q ss_pred EEEEEeccCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCcccccccccCCC
Q 018329 68 FYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSE 147 (358)
Q Consensus 68 fywf~~s~~~~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfSy~~~~~ 147 (358)
+|..+.. ...+.|+||+++|.+|.+.. +..+.+ . +.+..+++.+|.| |.|.|-.....
T Consensus 2 ~~~~~~~--~~~~~~~iv~lhG~~~~~~~-~~~~~~-----------~-------l~~~~~vi~~D~~-G~G~S~~~~~~ 59 (257)
T TIGR03611 2 HYELHGP--PDADAPVVVLSSGLGGSGSY-WAPQLD-----------V-------LTQRFHVVTYDHR-GTGRSPGELPP 59 (257)
T ss_pred EEEEecC--CCCCCCEEEEEcCCCcchhH-HHHHHH-----------H-------HHhccEEEEEcCC-CCCCCCCCCcc
Confidence 4555433 22457899999999887766 543331 1 1234699999977 99999643322
Q ss_pred cccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCC
Q 018329 148 DLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVIND 226 (358)
Q Consensus 148 ~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~ 226 (358)
.+ +.++.++++.++++.. ...+++|+|+|+||..+..+|.+..+ .++++++.+++..+
T Consensus 60 ~~---~~~~~~~~~~~~i~~~-------~~~~~~l~G~S~Gg~~a~~~a~~~~~-----------~v~~~i~~~~~~~~ 117 (257)
T TIGR03611 60 GY---SIAHMADDVLQLLDAL-------NIERFHFVGHALGGLIGLQLALRYPE-----------RLLSLVLINAWSRP 117 (257)
T ss_pred cC---CHHHHHHHHHHHHHHh-------CCCcEEEEEechhHHHHHHHHHHChH-----------HhHHheeecCCCCC
Confidence 22 4566677777766532 23579999999999988888764322 27788888887655
No 10
>PRK00870 haloalkane dehalogenase; Provisional
Probab=98.19 E-value=2.8e-05 Score=74.03 Aligned_cols=140 Identities=19% Similarity=0.229 Sum_probs=87.8
Q ss_pred ccCceecCCCCCCCCceEEEEEEEecCCCCc--eEEEEEEeccCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCC
Q 018329 35 DADRVRDLPGQPKVEFKHYAGYVKLRPNDHK--ALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGN 112 (358)
Q Consensus 35 ~~~~v~~lpg~~~~~~~~ysGyl~v~~~~~~--~lfywf~~s~~~~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~ 112 (358)
.+.++.+||.+|. --.|+.++..++. +++|.- . .++ +.|.||.++|.|+.+.. |..+.+
T Consensus 7 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~y~~--~-G~~-~~~~lvliHG~~~~~~~-w~~~~~--------- 67 (302)
T PRK00870 7 PDSRFENLPDYPF-----APHYVDVDDGDGGPLRMHYVD--E-GPA-DGPPVLLLHGEPSWSYL-YRKMIP--------- 67 (302)
T ss_pred CcccccCCcCCCC-----CceeEeecCCCCceEEEEEEe--c-CCC-CCCEEEEECCCCCchhh-HHHHHH---------
Confidence 3456778887763 2237888753333 566652 2 233 45789999999887777 554431
Q ss_pred CCeeecCCCCcccccceeEeecCcccccccccCC-CcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCcc
Q 018329 113 GSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNS-EDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHY 191 (358)
Q Consensus 113 ~~~l~~n~~sW~~~an~l~iDqP~G~GfSy~~~~-~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~y 191 (358)
.|.. +-.+++.+|.| |.|.|-.... .++ +.+..++++.++|+. +...++.|.|+|+||..
T Consensus 68 --~L~~------~gy~vi~~Dl~-G~G~S~~~~~~~~~---~~~~~a~~l~~~l~~-------l~~~~v~lvGhS~Gg~i 128 (302)
T PRK00870 68 --ILAA------AGHRVIAPDLI-GFGRSDKPTRREDY---TYARHVEWMRSWFEQ-------LDLTDVTLVCQDWGGLI 128 (302)
T ss_pred --HHHh------CCCEEEEECCC-CCCCCCCCCCcccC---CHHHHHHHHHHHHHH-------cCCCCEEEEEEChHHHH
Confidence 1111 23589999966 9998843211 122 445566666666643 23457999999999998
Q ss_pred HHHHHHHHHHHhhccCCCceeeeeeeEeeccc
Q 018329 192 VPQLAELIHERNIRAGKDSFINLKGFMIGNAV 223 (358)
Q Consensus 192 vp~la~~i~~~~~~~~~~~~inLkGi~igng~ 223 (358)
+-.+|.+--+ .++++++.++.
T Consensus 129 a~~~a~~~p~-----------~v~~lvl~~~~ 149 (302)
T PRK00870 129 GLRLAAEHPD-----------RFARLVVANTG 149 (302)
T ss_pred HHHHHHhChh-----------heeEEEEeCCC
Confidence 8777753211 27788888764
No 11
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=98.18 E-value=1.4e-05 Score=73.97 Aligned_cols=123 Identities=17% Similarity=0.093 Sum_probs=79.0
Q ss_pred EEEecCCCCceEEEEEEeccCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecC
Q 018329 56 YVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAP 135 (358)
Q Consensus 56 yl~v~~~~~~~lfywf~~s~~~~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP 135 (358)
|++++ +.+++|- +. .+.+.|.||+++|.+|.+.. +..+.+ .+ .+..+++.+|.|
T Consensus 10 ~~~~~---~~~~~~~--~~--g~~~~~~vv~~hG~~~~~~~-~~~~~~-----------~l-------~~~~~vi~~D~~ 63 (278)
T TIGR03056 10 RVTVG---PFHWHVQ--DM--GPTAGPLLLLLHGTGASTHS-WRDLMP-----------PL-------ARSFRVVAPDLP 63 (278)
T ss_pred eeeEC---CEEEEEE--ec--CCCCCCeEEEEcCCCCCHHH-HHHHHH-----------HH-------hhCcEEEeecCC
Confidence 55553 4455543 22 33446899999999887766 544332 11 123689999966
Q ss_pred cccccccccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeee
Q 018329 136 VGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLK 215 (358)
Q Consensus 136 ~G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLk 215 (358)
|.|.|.......+ +.+..++++.++++. +..++++|+|+|+||..+..+|.+. .-.++
T Consensus 64 -G~G~S~~~~~~~~---~~~~~~~~l~~~i~~-------~~~~~~~lvG~S~Gg~~a~~~a~~~-----------p~~v~ 121 (278)
T TIGR03056 64 -GHGFTRAPFRFRF---TLPSMAEDLSALCAA-------EGLSPDGVIGHSAGAAIALRLALDG-----------PVTPR 121 (278)
T ss_pred -CCCCCCCccccCC---CHHHHHHHHHHHHHH-------cCCCCceEEEECccHHHHHHHHHhC-----------Ccccc
Confidence 9998864332122 556777777777753 1235789999999998777666432 12377
Q ss_pred eeEeeccccCC
Q 018329 216 GFMIGNAVIND 226 (358)
Q Consensus 216 Gi~igng~~d~ 226 (358)
++++.++..++
T Consensus 122 ~~v~~~~~~~~ 132 (278)
T TIGR03056 122 MVVGINAALMP 132 (278)
T ss_pred eEEEEcCcccc
Confidence 89998887664
No 12
>PHA02857 monoglyceride lipase; Provisional
Probab=98.13 E-value=1.5e-05 Score=74.48 Aligned_cols=126 Identities=15% Similarity=0.178 Sum_probs=82.7
Q ss_pred CCceEEEEEEeccCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCccc-ccceeEeecCcccccc
Q 018329 63 DHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNK-AANMLFLEAPVGVGFS 141 (358)
Q Consensus 63 ~~~~lfywf~~s~~~~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~-~an~l~iDqP~G~GfS 141 (358)
+|..|+|.+++.. +..+|+||.++|..++|.. +-.+.+ .+.+ -..++.+|.| |.|.|
T Consensus 9 ~g~~l~~~~~~~~--~~~~~~v~llHG~~~~~~~-~~~~~~------------------~l~~~g~~via~D~~-G~G~S 66 (276)
T PHA02857 9 DNDYIYCKYWKPI--TYPKALVFISHGAGEHSGR-YEELAE------------------NISSLGILVFSHDHI-GHGRS 66 (276)
T ss_pred CCCEEEEEeccCC--CCCCEEEEEeCCCccccch-HHHHHH------------------HHHhCCCEEEEccCC-CCCCC
Confidence 3678999877774 3345899999999777766 544432 1223 2578999955 99998
Q ss_pred cccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeec
Q 018329 142 YTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGN 221 (358)
Q Consensus 142 y~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~ign 221 (358)
-.... ... +-....+|+.+++..+-+.++ ..+++|+|+|.||..+..+|.+ .. -+++|+++.+
T Consensus 67 ~~~~~-~~~--~~~~~~~d~~~~l~~~~~~~~---~~~~~lvG~S~GG~ia~~~a~~----~p-------~~i~~lil~~ 129 (276)
T PHA02857 67 NGEKM-MID--DFGVYVRDVVQHVVTIKSTYP---GVPVFLLGHSMGATISILAAYK----NP-------NLFTAMILMS 129 (276)
T ss_pred CCccC-CcC--CHHHHHHHHHHHHHHHHhhCC---CCCEEEEEcCchHHHHHHHHHh----Cc-------cccceEEEec
Confidence 54211 111 233456677777765444443 5689999999999866655532 11 2389999999
Q ss_pred cccCCC
Q 018329 222 AVINDP 227 (358)
Q Consensus 222 g~~d~~ 227 (358)
|.+++.
T Consensus 130 p~~~~~ 135 (276)
T PHA02857 130 PLVNAE 135 (276)
T ss_pred cccccc
Confidence 987743
No 13
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=98.13 E-value=1e-05 Score=74.33 Aligned_cols=130 Identities=21% Similarity=0.273 Sum_probs=78.6
Q ss_pred EEEEEEecCCCCceEEEEEEeccCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEe
Q 018329 53 YAGYVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFL 132 (358)
Q Consensus 53 ysGyl~v~~~~~~~lfywf~~s~~~~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~i 132 (358)
..++++++ +..+.|.-+. .+...|.||+++||||++...+..+.+ .+.. +-.+++.+
T Consensus 3 ~~~~~~~~---~~~~~~~~~~---~~~~~~~vl~~hG~~g~~~~~~~~~~~-----------~l~~------~g~~vi~~ 59 (288)
T TIGR01250 3 IEGIITVD---GGYHLFTKTG---GEGEKIKLLLLHGGPGMSHEYLENLRE-----------LLKE------EGREVIMY 59 (288)
T ss_pred ccceecCC---CCeEEEEecc---CCCCCCeEEEEcCCCCccHHHHHHHHH-----------HHHh------cCCEEEEE
Confidence 34566654 3344444322 223457889999999998652233321 1111 13689999
Q ss_pred ecCcccccccccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCcee
Q 018329 133 EAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFI 212 (358)
Q Consensus 133 DqP~G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~i 212 (358)
|.| |.|.|.......-. .+.+..++++..+++. +..++++|+|+|+||..+..+|..- ..
T Consensus 60 d~~-G~G~s~~~~~~~~~-~~~~~~~~~~~~~~~~-------~~~~~~~liG~S~Gg~ia~~~a~~~-----------p~ 119 (288)
T TIGR01250 60 DQL-GCGYSDQPDDSDEL-WTIDYFVDELEEVREK-------LGLDKFYLLGHSWGGMLAQEYALKY-----------GQ 119 (288)
T ss_pred cCC-CCCCCCCCCccccc-ccHHHHHHHHHHHHHH-------cCCCcEEEEEeehHHHHHHHHHHhC-----------cc
Confidence 977 99988643222100 1455666666655543 2245699999999999888887632 12
Q ss_pred eeeeeEeeccccC
Q 018329 213 NLKGFMIGNAVIN 225 (358)
Q Consensus 213 nLkGi~igng~~d 225 (358)
.++++++.++...
T Consensus 120 ~v~~lvl~~~~~~ 132 (288)
T TIGR01250 120 HLKGLIISSMLDS 132 (288)
T ss_pred ccceeeEeccccc
Confidence 3788888887653
No 14
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=98.07 E-value=2.5e-05 Score=73.85 Aligned_cols=123 Identities=16% Similarity=0.136 Sum_probs=81.6
Q ss_pred EEEecCCCCceEEEEEEeccCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecC
Q 018329 56 YVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAP 135 (358)
Q Consensus 56 yl~v~~~~~~~lfywf~~s~~~~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP 135 (358)
|++++ +.+++|.-. .+ ..|.||+++|.++.+.+ |..+.+ . +.+..+++.+|.|
T Consensus 12 ~~~~~---~~~i~y~~~----G~-~~~~vlllHG~~~~~~~-w~~~~~-----------~-------L~~~~~vi~~Dlp 64 (294)
T PLN02824 12 TWRWK---GYNIRYQRA----GT-SGPALVLVHGFGGNADH-WRKNTP-----------V-------LAKSHRVYAIDLL 64 (294)
T ss_pred eEEEc---CeEEEEEEc----CC-CCCeEEEECCCCCChhH-HHHHHH-----------H-------HHhCCeEEEEcCC
Confidence 66664 456665421 11 23789999999998888 665542 1 2344689999976
Q ss_pred cccccccccCCCcc---cccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCcee
Q 018329 136 VGVGFSYTNNSEDL---HKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFI 212 (358)
Q Consensus 136 ~G~GfSy~~~~~~~---~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~i 212 (358)
|.|.|-....... ...+.++.|+++.++|+.. ..++++|+|+|.||..+-.+|.+--+
T Consensus 65 -G~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~p~----------- 125 (294)
T PLN02824 65 -GYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDV-------VGDPAFVICNSVGGVVGLQAAVDAPE----------- 125 (294)
T ss_pred -CCCCCCCCccccccccccCCHHHHHHHHHHHHHHh-------cCCCeEEEEeCHHHHHHHHHHHhChh-----------
Confidence 9999964322110 0114566777777777643 23579999999999988777754322
Q ss_pred eeeeeEeecccc
Q 018329 213 NLKGFMIGNAVI 224 (358)
Q Consensus 213 nLkGi~igng~~ 224 (358)
.++++++.|+..
T Consensus 126 ~v~~lili~~~~ 137 (294)
T PLN02824 126 LVRGVMLINISL 137 (294)
T ss_pred heeEEEEECCCc
Confidence 288999998764
No 15
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=97.98 E-value=4.9e-05 Score=72.68 Aligned_cols=126 Identities=16% Similarity=0.277 Sum_probs=75.1
Q ss_pred EEEEEecCCCCceEEEEEEeccCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEee
Q 018329 54 AGYVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLE 133 (358)
Q Consensus 54 sGyl~v~~~~~~~lfywf~~s~~~~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iD 133 (358)
.+|+.+.+ +..++|+-. .++. .+-||+++|+||.++. ..... .+ . .+..+|+.+|
T Consensus 6 ~~~~~~~~--~~~l~y~~~---g~~~-~~~lvllHG~~~~~~~-~~~~~------------~~--~----~~~~~vi~~D 60 (306)
T TIGR01249 6 SGYLNVSD--NHQLYYEQS---GNPD-GKPVVFLHGGPGSGTD-PGCRR------------FF--D----PETYRIVLFD 60 (306)
T ss_pred CCeEEcCC--CcEEEEEEC---cCCC-CCEEEEECCCCCCCCC-HHHHh------------cc--C----ccCCEEEEEC
Confidence 35787763 567887632 2233 3457889999987654 11110 00 0 1346899999
Q ss_pred cCcccccccccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceee
Q 018329 134 APVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFIN 213 (358)
Q Consensus 134 qP~G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~in 213 (358)
.| |.|.|..... .+.. +..+.++++..+++ .. ...+++++|+|+||..+-.+|.+-.+ .
T Consensus 61 ~~-G~G~S~~~~~-~~~~-~~~~~~~dl~~l~~----~l---~~~~~~lvG~S~GG~ia~~~a~~~p~-----------~ 119 (306)
T TIGR01249 61 QR-GCGKSTPHAC-LEEN-TTWDLVADIEKLRE----KL---GIKNWLVFGGSWGSTLALAYAQTHPE-----------V 119 (306)
T ss_pred CC-CCCCCCCCCC-cccC-CHHHHHHHHHHHHH----Hc---CCCCEEEEEECHHHHHHHHHHHHChH-----------h
Confidence 77 9999963221 1111 33445555554443 33 23479999999999877777654322 2
Q ss_pred eeeeEeeccccC
Q 018329 214 LKGFMIGNAVIN 225 (358)
Q Consensus 214 LkGi~igng~~d 225 (358)
++++++.+..+.
T Consensus 120 v~~lvl~~~~~~ 131 (306)
T TIGR01249 120 VTGLVLRGIFLL 131 (306)
T ss_pred hhhheeeccccC
Confidence 677777776554
No 16
>PRK10673 acyl-CoA esterase; Provisional
Probab=97.96 E-value=3.1e-05 Score=71.07 Aligned_cols=104 Identities=13% Similarity=0.158 Sum_probs=74.1
Q ss_pred CCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCcccccccccCCCcccccCcH
Q 018329 76 KGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQ 155 (358)
Q Consensus 76 ~~~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfSy~~~~~~~~~~~~~ 155 (358)
+.+.+.|.||+++|.+|.+.. +..+.+ . +.+..+++.+|.| |.|.|... ..+ +.+
T Consensus 11 ~~~~~~~~iv~lhG~~~~~~~-~~~~~~-----------~-------l~~~~~vi~~D~~-G~G~s~~~--~~~---~~~ 65 (255)
T PRK10673 11 QNPHNNSPIVLVHGLFGSLDN-LGVLAR-----------D-------LVNDHDIIQVDMR-NHGLSPRD--PVM---NYP 65 (255)
T ss_pred CCCCCCCCEEEECCCCCchhH-HHHHHH-----------H-------HhhCCeEEEECCC-CCCCCCCC--CCC---CHH
Confidence 355677999999999998877 555432 1 2234699999977 88888542 222 456
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeecc
Q 018329 156 VTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNA 222 (358)
Q Consensus 156 ~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng 222 (358)
+.++|+.++|..+ ...+++|+|+|.||..+..+|.+-.+ .++++++.++
T Consensus 66 ~~~~d~~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~~~-----------~v~~lvli~~ 114 (255)
T PRK10673 66 AMAQDLLDTLDAL-------QIEKATFIGHSMGGKAVMALTALAPD-----------RIDKLVAIDI 114 (255)
T ss_pred HHHHHHHHHHHHc-------CCCceEEEEECHHHHHHHHHHHhCHh-----------hcceEEEEec
Confidence 6788888888752 23579999999999988888764322 2778888764
No 17
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.92 E-value=2.6e-05 Score=76.51 Aligned_cols=133 Identities=16% Similarity=0.208 Sum_probs=82.7
Q ss_pred eEEEEEEec--cCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCcccccccc
Q 018329 66 ALFYWFFEA--QKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYT 143 (358)
Q Consensus 66 ~lfywf~~s--~~~~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfSy~ 143 (358)
.-.||++++ +.+|++|||+|+++|| |.+.+.=|+.+.. ..+=+..-+...||.+|-..-. -.
T Consensus 105 ~~s~Wlvk~P~~~~pk~DpVlIYlHGG--------GY~l~~~p~qi~~-----L~~i~~~l~~~SILvLDYsLt~---~~ 168 (374)
T PF10340_consen 105 SQSYWLVKAPNRFKPKSDPVLIYLHGG--------GYFLGTTPSQIEF-----LLNIYKLLPEVSILVLDYSLTS---SD 168 (374)
T ss_pred cceEEEEeCCcccCCCCCcEEEEEcCC--------eeEecCCHHHHHH-----HHHHHHHcCCCeEEEEeccccc---cc
Confidence 346999995 3478889999999999 6666655554321 0111112223399999955432 00
Q ss_pred cCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccc
Q 018329 144 NNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAV 223 (358)
Q Consensus 144 ~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~ 223 (358)
..+..|++ +-.++.+..+...+.. ...++.|.|+|-||+-+-.+.+++.+.+.. +-=|++++.+||
T Consensus 169 ~~~~~yPt-----QL~qlv~~Y~~Lv~~~---G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~------~~Pk~~iLISPW 234 (374)
T PF10340_consen 169 EHGHKYPT-----QLRQLVATYDYLVESE---GNKNIILMGDSAGGNLALSFLQYLKKPNKL------PYPKSAILISPW 234 (374)
T ss_pred cCCCcCch-----HHHHHHHHHHHHHhcc---CCCeEEEEecCccHHHHHHHHHHHhhcCCC------CCCceeEEECCC
Confidence 02223442 2333444444444322 245899999999999999998887654321 223799999999
Q ss_pred cCCCC
Q 018329 224 INDPT 228 (358)
Q Consensus 224 ~d~~~ 228 (358)
+++..
T Consensus 235 v~l~~ 239 (374)
T PF10340_consen 235 VNLVP 239 (374)
T ss_pred cCCcC
Confidence 99974
No 18
>PRK06489 hypothetical protein; Provisional
Probab=97.89 E-value=0.00012 Score=71.77 Aligned_cols=131 Identities=15% Similarity=0.109 Sum_probs=69.8
Q ss_pred CceEEEEEEecc---CCCCCCCeEEEECCCCChhhhhhh--hhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCccc
Q 018329 64 HKALFYWFFEAQ---KGVSSKPLVLWLNGGPGCSSIAYG--AAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGV 138 (358)
Q Consensus 64 ~~~lfywf~~s~---~~~~~~pl~lwlnGGPG~Ss~~~g--~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~ 138 (358)
+..++|.-+... .+..+.|.||.++|++|.+.. +- .+.+ ..+.. ...--.+...|+.+|.| |.
T Consensus 49 g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~-~~~~~~~~---~l~~~-------~~~l~~~~~~Via~Dl~-Gh 116 (360)
T PRK06489 49 ELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKS-FLSPTFAG---ELFGP-------GQPLDASKYFIILPDGI-GH 116 (360)
T ss_pred CceEEEEecCCCCcccccCCCCeEEEeCCCCCchhh-hccchhHH---HhcCC-------CCcccccCCEEEEeCCC-CC
Confidence 466777643211 012336889999999887655 31 1100 00000 00011345689999988 99
Q ss_pred ccccccCCC---cccccCcHHHHHHHHHHHHHHHHHCCCCCCCCe-EEeccccCCccHHHHHHHHHHHhhccCCCceeee
Q 018329 139 GFSYTNNSE---DLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDF-YIAGESYAGHYVPQLAELIHERNIRAGKDSFINL 214 (358)
Q Consensus 139 GfSy~~~~~---~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~-yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inL 214 (358)
|.|-..... .....+.++.++++.+++.+ . +.-.++ +|+|+|.||..+-.+|.+--++ +
T Consensus 117 G~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~---~---lgi~~~~~lvG~SmGG~vAl~~A~~~P~~-----------V 179 (360)
T PRK06489 117 GKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTE---G---LGVKHLRLILGTSMGGMHAWMWGEKYPDF-----------M 179 (360)
T ss_pred CCCCCCCcCCCCCCCcccHHHHHHHHHHHHHH---h---cCCCceeEEEEECHHHHHHHHHHHhCchh-----------h
Confidence 988532111 00011344555555554422 1 222355 4899999998777776543221 6
Q ss_pred eeeEeeccc
Q 018329 215 KGFMIGNAV 223 (358)
Q Consensus 215 kGi~igng~ 223 (358)
+++++.++.
T Consensus 180 ~~LVLi~s~ 188 (360)
T PRK06489 180 DALMPMASQ 188 (360)
T ss_pred heeeeeccC
Confidence 677776654
No 19
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=97.86 E-value=8.1e-05 Score=71.79 Aligned_cols=138 Identities=13% Similarity=0.128 Sum_probs=84.0
Q ss_pred EEEEEEecCCCCceEEEEEEeccCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCccc-ccceeE
Q 018329 53 YAGYVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNK-AANMLF 131 (358)
Q Consensus 53 ysGyl~v~~~~~~~lfywf~~s~~~~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~-~an~l~ 131 (358)
..+++... ++..++|+.+........+|+||+++|..+.++-.+-.+. ..+.+ -.+|+.
T Consensus 33 ~~~~~~~~--dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~------------------~~L~~~Gy~V~~ 92 (330)
T PLN02298 33 SKSFFTSP--RGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTA------------------IFLAQMGFACFA 92 (330)
T ss_pred ccceEEcC--CCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHH------------------HHHHhCCCEEEE
Confidence 45566654 3678888654332222346899999998433221111110 01333 368999
Q ss_pred eecCcccccccccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCce
Q 018329 132 LEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSF 211 (358)
Q Consensus 132 iDqP~G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~ 211 (358)
+|.| |.|.|-.. ..+.. +.+..++|+..+++..-. ..++...+++|+|+|.||..+-.++.+ ..
T Consensus 93 ~D~r-GhG~S~~~--~~~~~-~~~~~~~D~~~~i~~l~~-~~~~~~~~i~l~GhSmGG~ia~~~a~~----~p------- 156 (330)
T PLN02298 93 LDLE-GHGRSEGL--RAYVP-NVDLVVEDCLSFFNSVKQ-REEFQGLPRFLYGESMGGAICLLIHLA----NP------- 156 (330)
T ss_pred ecCC-CCCCCCCc--cccCC-CHHHHHHHHHHHHHHHHh-cccCCCCCEEEEEecchhHHHHHHHhc----Cc-------
Confidence 9988 89988532 12221 456678888888875433 223335579999999999876655431 11
Q ss_pred eeeeeeEeeccccCC
Q 018329 212 INLKGFMIGNAVIND 226 (358)
Q Consensus 212 inLkGi~igng~~d~ 226 (358)
-.++|+++.+++.+.
T Consensus 157 ~~v~~lvl~~~~~~~ 171 (330)
T PLN02298 157 EGFDGAVLVAPMCKI 171 (330)
T ss_pred ccceeEEEecccccC
Confidence 138899999988654
No 20
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=97.85 E-value=3.1e-05 Score=68.05 Aligned_cols=103 Identities=20% Similarity=0.251 Sum_probs=70.5
Q ss_pred EEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCcccccccccCCCcccccCcHHHHHHHHH
Q 018329 84 VLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYA 163 (358)
Q Consensus 84 ~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a~~~~~ 163 (358)
||+++|.++.+.. +..+.+ .+ .+-.+++.+|.| |.|.|-.... +...+-++.++++.+
T Consensus 1 vv~~hG~~~~~~~-~~~~~~-----------~l-------~~~~~v~~~d~~-G~G~s~~~~~--~~~~~~~~~~~~l~~ 58 (228)
T PF12697_consen 1 VVFLHGFGGSSES-WDPLAE-----------AL-------ARGYRVIAFDLP-GHGRSDPPPD--YSPYSIEDYAEDLAE 58 (228)
T ss_dssp EEEE-STTTTGGG-GHHHHH-----------HH-------HTTSEEEEEECT-TSTTSSSHSS--GSGGSHHHHHHHHHH
T ss_pred eEEECCCCCCHHH-HHHHHH-----------HH-------hCCCEEEEEecC-Cccccccccc--cCCcchhhhhhhhhh
Confidence 6899999998877 555442 12 145589999977 9999865432 111145666777776
Q ss_pred HHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCC
Q 018329 164 FLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVIND 226 (358)
Q Consensus 164 fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~ 226 (358)
+|+. .. .++++|+|+|+||..+-.+|.+.-+ .++|+++.++....
T Consensus 59 ~l~~----~~---~~~~~lvG~S~Gg~~a~~~a~~~p~-----------~v~~~vl~~~~~~~ 103 (228)
T PF12697_consen 59 LLDA----LG---IKKVILVGHSMGGMIALRLAARYPD-----------RVKGLVLLSPPPPL 103 (228)
T ss_dssp HHHH----TT---TSSEEEEEETHHHHHHHHHHHHSGG-----------GEEEEEEESESSSH
T ss_pred cccc----cc---ccccccccccccccccccccccccc-----------ccccceeecccccc
Confidence 6653 32 2689999999999988877754211 38999999998754
No 21
>PRK03592 haloalkane dehalogenase; Provisional
Probab=97.83 E-value=0.00016 Score=68.40 Aligned_cols=115 Identities=15% Similarity=0.150 Sum_probs=77.8
Q ss_pred CceEEEEEEeccCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCcccccccc
Q 018329 64 HKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYT 143 (358)
Q Consensus 64 ~~~lfywf~~s~~~~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfSy~ 143 (358)
+..++|.-.- +.|.||+++|.|+.+.. |-.+.+ . +.+...++-+|.| |.|.|-.
T Consensus 16 g~~i~y~~~G------~g~~vvllHG~~~~~~~-w~~~~~-----------~-------L~~~~~via~D~~-G~G~S~~ 69 (295)
T PRK03592 16 GSRMAYIETG------EGDPIVFLHGNPTSSYL-WRNIIP-----------H-------LAGLGRCLAPDLI-GMGASDK 69 (295)
T ss_pred CEEEEEEEeC------CCCEEEEECCCCCCHHH-HHHHHH-----------H-------HhhCCEEEEEcCC-CCCCCCC
Confidence 4567765221 34789999999988887 654432 1 2333489999966 9999954
Q ss_pred cCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccc
Q 018329 144 NNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAV 223 (358)
Q Consensus 144 ~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~ 223 (358)
.. .++ +....|+|+..+++.. ...+++|.|+|.||.++-.+|.+--+ .++++++.|+.
T Consensus 70 ~~-~~~---~~~~~a~dl~~ll~~l-------~~~~~~lvGhS~Gg~ia~~~a~~~p~-----------~v~~lil~~~~ 127 (295)
T PRK03592 70 PD-IDY---TFADHARYLDAWFDAL-------GLDDVVLVGHDWGSALGFDWAARHPD-----------RVRGIAFMEAI 127 (295)
T ss_pred CC-CCC---CHHHHHHHHHHHHHHh-------CCCCeEEEEECHHHHHHHHHHHhChh-----------heeEEEEECCC
Confidence 32 222 4566677777777642 23589999999999887777654322 28899999986
Q ss_pred cCC
Q 018329 224 IND 226 (358)
Q Consensus 224 ~d~ 226 (358)
..+
T Consensus 128 ~~~ 130 (295)
T PRK03592 128 VRP 130 (295)
T ss_pred CCC
Confidence 544
No 22
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=97.81 E-value=0.00016 Score=70.58 Aligned_cols=128 Identities=13% Similarity=0.146 Sum_probs=80.2
Q ss_pred CCceEEEEEEeccCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCccc-ccceeEeecCcccccc
Q 018329 63 DHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNK-AANMLFLEAPVGVGFS 141 (358)
Q Consensus 63 ~~~~lfywf~~s~~~~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~-~an~l~iDqP~G~GfS 141 (358)
+|..+|+......+ .+.+|+||+++|..+.++..+-.+.+ .+.+ -.+|+-+|.| |.|.|
T Consensus 70 ~g~~l~~~~~~p~~-~~~~~~iv~lHG~~~~~~~~~~~~~~------------------~l~~~g~~v~~~D~~-G~G~S 129 (349)
T PLN02385 70 RGVEIFSKSWLPEN-SRPKAAVCFCHGYGDTCTFFFEGIAR------------------KIASSGYGVFAMDYP-GFGLS 129 (349)
T ss_pred CCCEEEEEEEecCC-CCCCeEEEEECCCCCccchHHHHHHH------------------HHHhCCCEEEEecCC-CCCCC
Confidence 46788876554422 23568999999976654431111110 1222 2589999988 89988
Q ss_pred cccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeec
Q 018329 142 YTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGN 221 (358)
Q Consensus 142 y~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~ign 221 (358)
-.. ..+.. +-+..++|+.++++.. ...+++...+++|+|+|.||..+-.+|.+ .. -.++|+++.+
T Consensus 130 ~~~--~~~~~-~~~~~~~dv~~~l~~l-~~~~~~~~~~~~LvGhSmGG~val~~a~~----~p-------~~v~glVLi~ 194 (349)
T PLN02385 130 EGL--HGYIP-SFDDLVDDVIEHYSKI-KGNPEFRGLPSFLFGQSMGGAVALKVHLK----QP-------NAWDGAILVA 194 (349)
T ss_pred CCC--CCCcC-CHHHHHHHHHHHHHHH-HhccccCCCCEEEEEeccchHHHHHHHHh----Cc-------chhhheeEec
Confidence 542 12221 4456778888777653 33445556689999999999877655532 11 1278999998
Q ss_pred cccC
Q 018329 222 AVIN 225 (358)
Q Consensus 222 g~~d 225 (358)
|...
T Consensus 195 p~~~ 198 (349)
T PLN02385 195 PMCK 198 (349)
T ss_pred cccc
Confidence 8654
No 23
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=97.79 E-value=0.00018 Score=67.46 Aligned_cols=117 Identities=17% Similarity=0.096 Sum_probs=75.7
Q ss_pred CceEEEEEEeccCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCcccccccc
Q 018329 64 HKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYT 143 (358)
Q Consensus 64 ~~~lfywf~~s~~~~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfSy~ 143 (358)
+..+.||..+. . ...|.||+++|-++.+.. |..+.+ .+ .+..+++.+|.| |.|.|-.
T Consensus 11 ~~~~~~~~~~~--~-~~~~plvllHG~~~~~~~-w~~~~~-----------~L-------~~~~~vi~~Dl~-G~G~S~~ 67 (276)
T TIGR02240 11 GQSIRTAVRPG--K-EGLTPLLIFNGIGANLEL-VFPFIE-----------AL-------DPDLEVIAFDVP-GVGGSST 67 (276)
T ss_pred CcEEEEEEecC--C-CCCCcEEEEeCCCcchHH-HHHHHH-----------Hh-------ccCceEEEECCC-CCCCCCC
Confidence 56788876432 2 234678999987666666 544332 11 234699999966 9999943
Q ss_pred cCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccc
Q 018329 144 NNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAV 223 (358)
Q Consensus 144 ~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~ 223 (358)
. ..++ +.+..++++.++|... .-++++|+|+|+||..+-.+|.+--+ .++++++.|+.
T Consensus 68 ~-~~~~---~~~~~~~~~~~~i~~l-------~~~~~~LvG~S~GG~va~~~a~~~p~-----------~v~~lvl~~~~ 125 (276)
T TIGR02240 68 P-RHPY---RFPGLAKLAARMLDYL-------DYGQVNAIGVSWGGALAQQFAHDYPE-----------RCKKLILAATA 125 (276)
T ss_pred C-CCcC---cHHHHHHHHHHHHHHh-------CcCceEEEEECHHHHHHHHHHHHCHH-----------HhhheEEeccC
Confidence 2 1122 3455566666666542 23479999999999987777753222 28899999877
Q ss_pred cC
Q 018329 224 IN 225 (358)
Q Consensus 224 ~d 225 (358)
..
T Consensus 126 ~~ 127 (276)
T TIGR02240 126 AG 127 (276)
T ss_pred Cc
Confidence 54
No 24
>PRK03204 haloalkane dehalogenase; Provisional
Probab=97.74 E-value=0.00033 Score=66.42 Aligned_cols=121 Identities=15% Similarity=0.191 Sum_probs=72.0
Q ss_pred EEEEEecCCCCceEEEEEEeccCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEee
Q 018329 54 AGYVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLE 133 (358)
Q Consensus 54 sGyl~v~~~~~~~lfywf~~s~~~~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iD 133 (358)
+.+++++ +..++|-- . . ..|.||+++|.|..+.. +-.+.+ .+.+..+++.+|
T Consensus 16 ~~~~~~~---~~~i~y~~--~-G---~~~~iv~lHG~~~~~~~-~~~~~~------------------~l~~~~~vi~~D 67 (286)
T PRK03204 16 SRWFDSS---RGRIHYID--E-G---TGPPILLCHGNPTWSFL-YRDIIV------------------ALRDRFRCVAPD 67 (286)
T ss_pred ceEEEcC---CcEEEEEE--C-C---CCCEEEEECCCCccHHH-HHHHHH------------------HHhCCcEEEEEC
Confidence 3467774 45566541 1 1 24789999999865544 433221 123346899999
Q ss_pred cCcccccccccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceee
Q 018329 134 APVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFIN 213 (358)
Q Consensus 134 qP~G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~in 213 (358)
.| |.|.|-.....++ +.+..++++.++++. . ...+++|+|+|+||..+-.+|. ... -.
T Consensus 68 ~~-G~G~S~~~~~~~~---~~~~~~~~~~~~~~~----~---~~~~~~lvG~S~Gg~va~~~a~----~~p-------~~ 125 (286)
T PRK03204 68 YL-GFGLSERPSGFGY---QIDEHARVIGEFVDH----L---GLDRYLSMGQDWGGPISMAVAV----ERA-------DR 125 (286)
T ss_pred CC-CCCCCCCCCcccc---CHHHHHHHHHHHHHH----h---CCCCEEEEEECccHHHHHHHHH----hCh-------hh
Confidence 66 9998843221122 334555555555543 2 2357999999999986544443 211 23
Q ss_pred eeeeEeecccc
Q 018329 214 LKGFMIGNAVI 224 (358)
Q Consensus 214 LkGi~igng~~ 224 (358)
++++++.++..
T Consensus 126 v~~lvl~~~~~ 136 (286)
T PRK03204 126 VRGVVLGNTWF 136 (286)
T ss_pred eeEEEEECccc
Confidence 88988888764
No 25
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=97.68 E-value=0.00039 Score=69.40 Aligned_cols=130 Identities=17% Similarity=0.139 Sum_probs=84.2
Q ss_pred CCCceEEEEEEeccCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCcccccc
Q 018329 62 NDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFS 141 (358)
Q Consensus 62 ~~~~~lfywf~~s~~~~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfS 141 (358)
.++..+|++.+.... ...+|+||+++|.++.+.. +-.+.+ .+. .+-.+++-+|.| |.|.|
T Consensus 118 ~~~~~l~~~~~~p~~-~~~~~~Vl~lHG~~~~~~~-~~~~a~-----------~L~------~~Gy~V~~~D~r-GhG~S 177 (395)
T PLN02652 118 ARRNALFCRSWAPAA-GEMRGILIIIHGLNEHSGR-YLHFAK-----------QLT------SCGFGVYAMDWI-GHGGS 177 (395)
T ss_pred CCCCEEEEEEecCCC-CCCceEEEEECCchHHHHH-HHHHHH-----------HHH------HCCCEEEEeCCC-CCCCC
Confidence 345678887776642 2346899999999776665 433321 111 123588999966 88988
Q ss_pred cccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeec
Q 018329 142 YTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGN 221 (358)
Q Consensus 142 y~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~ign 221 (358)
-.. ..+.. +.+..++|+..+++..-..+| ..+++|+|+|.||..+..++. +.+ ..-.++|+++.+
T Consensus 178 ~~~--~~~~~-~~~~~~~Dl~~~l~~l~~~~~---~~~i~lvGhSmGG~ial~~a~----~p~-----~~~~v~glVL~s 242 (395)
T PLN02652 178 DGL--HGYVP-SLDYVVEDTEAFLEKIRSENP---GVPCFLFGHSTGGAVVLKAAS----YPS-----IEDKLEGIVLTS 242 (395)
T ss_pred CCC--CCCCc-CHHHHHHHHHHHHHHHHHhCC---CCCEEEEEECHHHHHHHHHHh----ccC-----cccccceEEEEC
Confidence 542 22222 455667888888887666665 347999999999987655442 111 012488999999
Q ss_pred cccCC
Q 018329 222 AVIND 226 (358)
Q Consensus 222 g~~d~ 226 (358)
|+++.
T Consensus 243 P~l~~ 247 (395)
T PLN02652 243 PALRV 247 (395)
T ss_pred ccccc
Confidence 98754
No 26
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=97.60 E-value=0.00017 Score=76.04 Aligned_cols=143 Identities=17% Similarity=0.202 Sum_probs=87.2
Q ss_pred EEEecCCCCceEEEEEEeccC-CCCC-CCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEee
Q 018329 56 YVKLRPNDHKALFYWFFEAQK-GVSS-KPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLE 133 (358)
Q Consensus 56 yl~v~~~~~~~lfywf~~s~~-~~~~-~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iD 133 (358)
++.+...+|..+..|++.... ++.+ -|+|++++||| +++ ++. ..... -..=+.+-..||+++
T Consensus 367 ~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP--~~~-~~~-------~~~~~------~q~~~~~G~~V~~~n 430 (620)
T COG1506 367 PVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGP--SAQ-VGY-------SFNPE------IQVLASAGYAVLAPN 430 (620)
T ss_pred EEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCC--ccc-ccc-------ccchh------hHHHhcCCeEEEEeC
Confidence 334433346789999887753 4433 49999999999 555 341 11110 011134456888888
Q ss_pred cCcccccccccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceee
Q 018329 134 APVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFIN 213 (358)
Q Consensus 134 qP~G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~in 213 (358)
-.--+||+..-....... --....+|+.+++. |+++.|.....++.|+|.||||-. +..++.+.. .
T Consensus 431 ~RGS~GyG~~F~~~~~~~-~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGym----tl~~~~~~~--------~ 496 (620)
T COG1506 431 YRGSTGYGREFADAIRGD-WGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYM----TLLAATKTP--------R 496 (620)
T ss_pred CCCCCccHHHHHHhhhhc-cCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHH----HHHHHhcCc--------h
Confidence 443355543211111101 01134678888998 899999988888999999999964 444444321 2
Q ss_pred eeeeEeeccccCCCC
Q 018329 214 LKGFMIGNAVINDPT 228 (358)
Q Consensus 214 LkGi~igng~~d~~~ 228 (358)
+|..+...|.++...
T Consensus 497 f~a~~~~~~~~~~~~ 511 (620)
T COG1506 497 FKAAVAVAGGVDWLL 511 (620)
T ss_pred hheEEeccCcchhhh
Confidence 778888888776543
No 27
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=97.58 E-value=0.00026 Score=63.27 Aligned_cols=89 Identities=18% Similarity=0.177 Sum_probs=58.7
Q ss_pred CCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCcccccccccCCCcccccCcHHHH
Q 018329 79 SSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTA 158 (358)
Q Consensus 79 ~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a 158 (358)
..+|++|.++|-++.+.. +..+.+ .+ .+..+++.+|.| |.|.|-... ..+ +.++.+
T Consensus 11 ~~~~~li~~hg~~~~~~~-~~~~~~-----------~l-------~~~~~v~~~d~~-G~G~s~~~~-~~~---~~~~~~ 66 (251)
T TIGR02427 11 DGAPVLVFINSLGTDLRM-WDPVLP-----------AL-------TPDFRVLRYDKR-GHGLSDAPE-GPY---SIEDLA 66 (251)
T ss_pred CCCCeEEEEcCcccchhh-HHHHHH-----------Hh-------hcccEEEEecCC-CCCCCCCCC-CCC---CHHHHH
Confidence 367999999986555544 443332 11 123589999977 889884321 122 456667
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHH
Q 018329 159 NDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAEL 198 (358)
Q Consensus 159 ~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~ 198 (358)
+++.++++.+ ...+++|+|+|+||..+-.+|.+
T Consensus 67 ~~~~~~i~~~-------~~~~v~liG~S~Gg~~a~~~a~~ 99 (251)
T TIGR02427 67 DDVLALLDHL-------GIERAVFCGLSLGGLIAQGLAAR 99 (251)
T ss_pred HHHHHHHHHh-------CCCceEEEEeCchHHHHHHHHHH
Confidence 7777777642 23479999999999988777764
No 28
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=97.55 E-value=0.00029 Score=62.70 Aligned_cols=105 Identities=21% Similarity=0.333 Sum_probs=65.6
Q ss_pred CCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCcccccccccCCCcccccCcHHHHHH
Q 018329 81 KPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTAND 160 (358)
Q Consensus 81 ~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a~~ 160 (358)
+|.||+++|.+|.+.. +-.+.+ .+ .+-.+++-+|.| |.|.|.... .....+.++.+++
T Consensus 1 ~~~vv~~hG~~~~~~~-~~~~~~-----------~L-------~~~~~v~~~d~~-g~G~s~~~~--~~~~~~~~~~~~~ 58 (251)
T TIGR03695 1 KPVLVFLHGFLGSGAD-WQALIE-----------LL-------GPHFRCLAIDLP-GHGSSQSPD--EIERYDFEEAAQD 58 (251)
T ss_pred CCEEEEEcCCCCchhh-HHHHHH-----------Hh-------cccCeEEEEcCC-CCCCCCCCC--ccChhhHHHHHHH
Confidence 4789999998887776 543321 11 123688999966 888884321 1111133444545
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeecccc
Q 018329 161 SYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVI 224 (358)
Q Consensus 161 ~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~ 224 (358)
+ +..+.+.+ ..++++|.|+|+||..+..+|.+.- -.++++++.++..
T Consensus 59 ~---~~~~~~~~---~~~~~~l~G~S~Gg~ia~~~a~~~~-----------~~v~~lil~~~~~ 105 (251)
T TIGR03695 59 I---LATLLDQL---GIEPFFLVGYSMGGRIALYYALQYP-----------ERVQGLILESGSP 105 (251)
T ss_pred H---HHHHHHHc---CCCeEEEEEeccHHHHHHHHHHhCc-----------hheeeeEEecCCC
Confidence 2 33333333 2468999999999998888876432 1378888887754
No 29
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=97.54 E-value=0.00083 Score=67.16 Aligned_cols=109 Identities=13% Similarity=0.138 Sum_probs=68.2
Q ss_pred CCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCcccccccccCCCcccccCcHHHH
Q 018329 79 SSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTA 158 (358)
Q Consensus 79 ~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a 158 (358)
...|.||.++|.++.+.. +....+ . +.+..+|+-+|.| |.|.|-.. ++...+.++..
T Consensus 103 ~~~p~vvllHG~~~~~~~-~~~~~~-----------~-------L~~~~~vi~~D~r-G~G~S~~~---~~~~~~~~~~~ 159 (402)
T PLN02894 103 EDAPTLVMVHGYGASQGF-FFRNFD-----------A-------LASRFRVIAIDQL-GWGGSSRP---DFTCKSTEETE 159 (402)
T ss_pred CCCCEEEEECCCCcchhH-HHHHHH-----------H-------HHhCCEEEEECCC-CCCCCCCC---CcccccHHHHH
Confidence 356999999999776665 432110 1 2234689999977 88888422 12110223344
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeecccc
Q 018329 159 NDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVI 224 (358)
Q Consensus 159 ~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~ 224 (358)
+.+.+.+..|.+.. ...+++|.|+|+||..+-.+|.+-. -.++++++.+++.
T Consensus 160 ~~~~~~i~~~~~~l---~~~~~~lvGhS~GG~la~~~a~~~p-----------~~v~~lvl~~p~~ 211 (402)
T PLN02894 160 AWFIDSFEEWRKAK---NLSNFILLGHSFGGYVAAKYALKHP-----------EHVQHLILVGPAG 211 (402)
T ss_pred HHHHHHHHHHHHHc---CCCCeEEEEECHHHHHHHHHHHhCc-----------hhhcEEEEECCcc
Confidence 45666666766543 2347999999999987666654321 2378888888764
No 30
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=97.53 E-value=0.00029 Score=64.16 Aligned_cols=100 Identities=19% Similarity=0.229 Sum_probs=67.6
Q ss_pred CCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCcccccccccCCCcccccCcHHHHHH
Q 018329 81 KPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTAND 160 (358)
Q Consensus 81 ~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a~~ 160 (358)
.|.||+++|.+|.+.. |-.+.+ .+ +..+++.+|.| |.|.|..... . +-++.|++
T Consensus 2 ~p~vvllHG~~~~~~~-w~~~~~-----------~l--------~~~~vi~~D~~-G~G~S~~~~~----~-~~~~~~~~ 55 (242)
T PRK11126 2 LPWLVFLHGLLGSGQD-WQPVGE-----------AL--------PDYPRLYIDLP-GHGGSAAISV----D-GFADVSRL 55 (242)
T ss_pred CCEEEEECCCCCChHH-HHHHHH-----------Hc--------CCCCEEEecCC-CCCCCCCccc----c-CHHHHHHH
Confidence 5889999999998877 654432 11 23689999955 9999853211 1 44566777
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccc
Q 018329 161 SYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAV 223 (358)
Q Consensus 161 ~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~ 223 (358)
+.++|+. +.-.+++++|+|+||..+-.+|.+.. .. .++++++.++.
T Consensus 56 l~~~l~~-------~~~~~~~lvG~S~Gg~va~~~a~~~~---~~-------~v~~lvl~~~~ 101 (242)
T PRK11126 56 LSQTLQS-------YNILPYWLVGYSLGGRIAMYYACQGL---AG-------GLCGLIVEGGN 101 (242)
T ss_pred HHHHHHH-------cCCCCeEEEEECHHHHHHHHHHHhCC---cc-------cccEEEEeCCC
Confidence 7666653 23458999999999988777776421 11 17788887755
No 31
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=97.49 E-value=0.00078 Score=66.99 Aligned_cols=133 Identities=18% Similarity=0.145 Sum_probs=79.9
Q ss_pred CceEEEEEEEecCCCCceEEEEEEeccCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccc
Q 018329 49 EFKHYAGYVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAAN 128 (358)
Q Consensus 49 ~~~~ysGyl~v~~~~~~~lfywf~~s~~~~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an 128 (358)
+.++-+|+.... ++-.+||. +. .+...|.||.++|.|+.+.. |-.+.+ . +.+..+
T Consensus 101 ~~~~~~~~~~~~--~~~~~~y~--~~--G~~~~~~ivllHG~~~~~~~-w~~~~~-----------~-------L~~~~~ 155 (383)
T PLN03084 101 GLKMGAQSQASS--DLFRWFCV--ES--GSNNNPPVLLIHGFPSQAYS-YRKVLP-----------V-------LSKNYH 155 (383)
T ss_pred cccccceeEEcC--CceEEEEE--ec--CCCCCCeEEEECCCCCCHHH-HHHHHH-----------H-------HhcCCE
Confidence 344444544422 24455554 22 33356899999999887766 544332 1 223468
Q ss_pred eeEeecCcccccccccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCC
Q 018329 129 MLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGK 208 (358)
Q Consensus 129 ~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~ 208 (358)
++.+|.| |.|+|.......-...+-+..++++.++|+.. ...+++|+|+|+||..+-.+|. +..
T Consensus 156 Via~Dlp-G~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l-------~~~~~~LvG~s~GG~ia~~~a~----~~P---- 219 (383)
T PLN03084 156 AIAFDWL-GFGFSDKPQPGYGFNYTLDEYVSSLESLIDEL-------KSDKVSLVVQGYFSPPVVKYAS----AHP---- 219 (383)
T ss_pred EEEECCC-CCCCCCCCcccccccCCHHHHHHHHHHHHHHh-------CCCCceEEEECHHHHHHHHHHH----hCh----
Confidence 9999976 99999643221000114566677777777652 2347999999999965444443 221
Q ss_pred CceeeeeeeEeeccccC
Q 018329 209 DSFINLKGFMIGNAVIN 225 (358)
Q Consensus 209 ~~~inLkGi~igng~~d 225 (358)
-.++++++.|+...
T Consensus 220 ---~~v~~lILi~~~~~ 233 (383)
T PLN03084 220 ---DKIKKLILLNPPLT 233 (383)
T ss_pred ---HhhcEEEEECCCCc
Confidence 12889999998653
No 32
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=97.48 E-value=0.001 Score=65.28 Aligned_cols=128 Identities=16% Similarity=0.060 Sum_probs=76.6
Q ss_pred EEEEEecCCCCc-eEEEEEEeccCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEe
Q 018329 54 AGYVKLRPNDHK-ALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFL 132 (358)
Q Consensus 54 sGyl~v~~~~~~-~lfywf~~s~~~~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~i 132 (358)
..++..+ +. .++|.-..+.......|.||.|+|.++.+.. |..+.+ . ..+...++.+
T Consensus 63 ~~~~~~~---g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~-w~~~~~-----------~-------L~~~~~via~ 120 (360)
T PLN02679 63 CKKWKWK---GEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPH-WRRNIG-----------V-------LAKNYTVYAI 120 (360)
T ss_pred CceEEEC---CceeEEEEEecCcccCCCCCeEEEECCCCCCHHH-HHHHHH-----------H-------HhcCCEEEEE
Confidence 3355554 33 6666633221111134788999999888777 554432 1 1233589999
Q ss_pred ecCcccccccccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCcee
Q 018329 133 EAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFI 212 (358)
Q Consensus 133 DqP~G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~i 212 (358)
|.| |.|.|-......| +.+..++++.++|+.. ...+++|+|+|.||..+-.+|.. ...+
T Consensus 121 Dl~-G~G~S~~~~~~~~---~~~~~a~~l~~~l~~l-------~~~~~~lvGhS~Gg~ia~~~a~~--~~P~-------- 179 (360)
T PLN02679 121 DLL-GFGASDKPPGFSY---TMETWAELILDFLEEV-------VQKPTVLIGNSVGSLACVIAASE--STRD-------- 179 (360)
T ss_pred CCC-CCCCCCCCCCccc---cHHHHHHHHHHHHHHh-------cCCCeEEEEECHHHHHHHHHHHh--cChh--------
Confidence 977 9998853222122 4466777777777632 23589999999999655444421 1111
Q ss_pred eeeeeEeecccc
Q 018329 213 NLKGFMIGNAVI 224 (358)
Q Consensus 213 nLkGi~igng~~ 224 (358)
.++|+++.|+..
T Consensus 180 rV~~LVLi~~~~ 191 (360)
T PLN02679 180 LVRGLVLLNCAG 191 (360)
T ss_pred hcCEEEEECCcc
Confidence 278888888653
No 33
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=97.47 E-value=0.00073 Score=67.86 Aligned_cols=80 Identities=20% Similarity=0.213 Sum_probs=54.5
Q ss_pred cceeEeecCcccccccccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhcc
Q 018329 127 ANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRA 206 (358)
Q Consensus 127 an~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~ 206 (358)
.++|-+|.| |+|.|-... ... + ...+...+..|+...|.....++.|+|.|+||.+++.+|..-.
T Consensus 223 y~vl~~D~p-G~G~s~~~~---~~~-d----~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p------ 287 (414)
T PRK05077 223 IAMLTIDMP-SVGFSSKWK---LTQ-D----SSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEP------ 287 (414)
T ss_pred CEEEEECCC-CCCCCCCCC---ccc-c----HHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCC------
Confidence 589999999 999884321 110 1 1222234455666777776778999999999999998875311
Q ss_pred CCCceeeeeeeEeeccccCC
Q 018329 207 GKDSFINLKGFMIGNAVIND 226 (358)
Q Consensus 207 ~~~~~inLkGi~igng~~d~ 226 (358)
-.++++++.+|.++.
T Consensus 288 -----~ri~a~V~~~~~~~~ 302 (414)
T PRK05077 288 -----PRLKAVACLGPVVHT 302 (414)
T ss_pred -----cCceEEEEECCccch
Confidence 137888888887653
No 34
>PRK10749 lysophospholipase L2; Provisional
Probab=97.45 E-value=0.00097 Score=64.58 Aligned_cols=125 Identities=14% Similarity=0.082 Sum_probs=78.6
Q ss_pred CceEEEEEEeccCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCcccccccc
Q 018329 64 HKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYT 143 (358)
Q Consensus 64 ~~~lfywf~~s~~~~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfSy~ 143 (358)
+..++|+.+... ..+|+||.++|-.+.+.. +..+.. .+. .+-.+++-+|.| |.|.|-.
T Consensus 40 g~~l~~~~~~~~---~~~~~vll~HG~~~~~~~-y~~~~~-----------~l~------~~g~~v~~~D~~-G~G~S~~ 97 (330)
T PRK10749 40 DIPIRFVRFRAP---HHDRVVVICPGRIESYVK-YAELAY-----------DLF------HLGYDVLIIDHR-GQGRSGR 97 (330)
T ss_pred CCEEEEEEccCC---CCCcEEEEECCccchHHH-HHHHHH-----------HHH------HCCCeEEEEcCC-CCCCCCC
Confidence 567888866542 345799999998665544 333221 010 122588999966 9998853
Q ss_pred cCCC---cccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEee
Q 018329 144 NNSE---DLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIG 220 (358)
Q Consensus 144 ~~~~---~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~ig 220 (358)
.... .... +-+..++|+..+++...+.++ ..++++.|+|.||..+-.+|.+ . . -.++|+++.
T Consensus 98 ~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~---~~~~~l~GhSmGG~ia~~~a~~---~-p-------~~v~~lvl~ 162 (330)
T PRK10749 98 LLDDPHRGHVE-RFNDYVDDLAAFWQQEIQPGP---YRKRYALAHSMGGAILTLFLQR---H-P-------GVFDAIALC 162 (330)
T ss_pred CCCCCCcCccc-cHHHHHHHHHHHHHHHHhcCC---CCCeEEEEEcHHHHHHHHHHHh---C-C-------CCcceEEEE
Confidence 2111 1111 445677788888876554433 5689999999999876655542 1 1 127899999
Q ss_pred ccccC
Q 018329 221 NAVIN 225 (358)
Q Consensus 221 ng~~d 225 (358)
+|...
T Consensus 163 ~p~~~ 167 (330)
T PRK10749 163 APMFG 167 (330)
T ss_pred Cchhc
Confidence 98764
No 35
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=97.40 E-value=0.00097 Score=62.11 Aligned_cols=106 Identities=14% Similarity=0.143 Sum_probs=62.1
Q ss_pred CCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCcccccccccCCCcccccCcHHHHHH
Q 018329 81 KPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTAND 160 (358)
Q Consensus 81 ~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a~~ 160 (358)
.|.||+++|.++.+.. +..+.. .+. .-..+..+++.+|.| |.|.|-... .+.. .....+++
T Consensus 30 ~~~ivllHG~~~~~~~-~~~~~~-----------~~~---~l~~~~~~vi~~D~~-G~G~S~~~~-~~~~--~~~~~~~~ 90 (282)
T TIGR03343 30 GEAVIMLHGGGPGAGG-WSNYYR-----------NIG---PFVDAGYRVILKDSP-GFNKSDAVV-MDEQ--RGLVNARA 90 (282)
T ss_pred CCeEEEECCCCCchhh-HHHHHH-----------HHH---HHHhCCCEEEEECCC-CCCCCCCCc-Cccc--ccchhHHH
Confidence 4678999997655443 321110 000 001223799999966 999984321 1111 11234566
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccc
Q 018329 161 SYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAV 223 (358)
Q Consensus 161 ~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~ 223 (358)
+.++++. +..+++++.|+|+||..+-.+|.+--++ ++++++.+|.
T Consensus 91 l~~~l~~-------l~~~~~~lvG~S~Gg~ia~~~a~~~p~~-----------v~~lvl~~~~ 135 (282)
T TIGR03343 91 VKGLMDA-------LDIEKAHLVGNSMGGATALNFALEYPDR-----------IGKLILMGPG 135 (282)
T ss_pred HHHHHHH-------cCCCCeeEEEECchHHHHHHHHHhChHh-----------hceEEEECCC
Confidence 6555543 2345899999999999988887643222 6677777653
No 36
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=97.36 E-value=0.0013 Score=63.94 Aligned_cols=103 Identities=17% Similarity=0.147 Sum_probs=67.1
Q ss_pred CCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCcccccccccCCCcccccCcHHHH
Q 018329 79 SSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTA 158 (358)
Q Consensus 79 ~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a 158 (358)
.+.|.||+++|.+|.+.. +..+.+ .+ .+..+++-+|.| |.|.|-.... . . +.++.+
T Consensus 129 ~~~~~vl~~HG~~~~~~~-~~~~~~-----------~l-------~~~~~v~~~d~~-g~G~s~~~~~-~--~-~~~~~~ 184 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLNN-WLFNHA-----------AL-------AAGRPVIALDLP-GHGASSKAVG-A--G-SLDELA 184 (371)
T ss_pred CCCCeEEEECCCCCccch-HHHHHH-----------HH-------hcCCEEEEEcCC-CCCCCCCCCC-C--C-CHHHHH
Confidence 446889999999888777 555442 11 112589999966 8998842211 1 1 445556
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccc
Q 018329 159 NDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAV 223 (358)
Q Consensus 159 ~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~ 223 (358)
+++..+++. +...+++|.|+|+||..+..+|.+-. -.++++++.++.
T Consensus 185 ~~~~~~~~~-------~~~~~~~lvG~S~Gg~~a~~~a~~~~-----------~~v~~lv~~~~~ 231 (371)
T PRK14875 185 AAVLAFLDA-------LGIERAHLVGHSMGGAVALRLAARAP-----------QRVASLTLIAPA 231 (371)
T ss_pred HHHHHHHHh-------cCCccEEEEeechHHHHHHHHHHhCc-----------hheeEEEEECcC
Confidence 666555543 23457999999999999888776421 126777777664
No 37
>PRK10349 carboxylesterase BioH; Provisional
Probab=97.35 E-value=0.00056 Score=63.09 Aligned_cols=95 Identities=15% Similarity=0.109 Sum_probs=62.9
Q ss_pred CeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCcccccccccCCCcccccCcHHHHHHH
Q 018329 82 PLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDS 161 (358)
Q Consensus 82 pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a~~~ 161 (358)
|.||.++|.++++.. |-.+.+ .+.+..+++.+|.| |.|.|-..+ .+ +.++.++++
T Consensus 14 ~~ivllHG~~~~~~~-w~~~~~------------------~L~~~~~vi~~Dl~-G~G~S~~~~--~~---~~~~~~~~l 68 (256)
T PRK10349 14 VHLVLLHGWGLNAEV-WRCIDE------------------ELSSHFTLHLVDLP-GFGRSRGFG--AL---SLADMAEAV 68 (256)
T ss_pred CeEEEECCCCCChhH-HHHHHH------------------HHhcCCEEEEecCC-CCCCCCCCC--CC---CHHHHHHHH
Confidence 569999998877777 544332 13355799999977 999985321 11 344445544
Q ss_pred HHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccc
Q 018329 162 YAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAV 223 (358)
Q Consensus 162 ~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~ 223 (358)
.+ +...+++++|+|+||..+..+|.+-. -.++++++.|+.
T Consensus 69 ~~-----------~~~~~~~lvGhS~Gg~ia~~~a~~~p-----------~~v~~lili~~~ 108 (256)
T PRK10349 69 LQ-----------QAPDKAIWLGWSLGGLVASQIALTHP-----------ERVQALVTVASS 108 (256)
T ss_pred Hh-----------cCCCCeEEEEECHHHHHHHHHHHhCh-----------HhhheEEEecCc
Confidence 32 12357999999999998887775321 127888887763
No 38
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=97.34 E-value=0.0017 Score=61.29 Aligned_cols=125 Identities=13% Similarity=0.108 Sum_probs=75.7
Q ss_pred CceEEEEEEeccCCCCCCCeEEEECCCCC---hhh-hhhhhhhhcCCeEEcCCCCeeecCCCCcc-cccceeEeecCccc
Q 018329 64 HKALFYWFFEAQKGVSSKPLVLWLNGGPG---CSS-IAYGAAQELGPFLVGGNGSRLKFNKYSWN-KAANMLFLEAPVGV 138 (358)
Q Consensus 64 ~~~lfywf~~s~~~~~~~pl~lwlnGGPG---~Ss-~~~g~~~e~GP~~~~~~~~~l~~n~~sW~-~~an~l~iDqP~G~ 138 (358)
..++|.|+++.... ..+|+||.++|-.+ ++. + +..+.+ .+. .-.+++-+|.| |.
T Consensus 9 ~g~~~~~~~~p~~~-~~~~~VlllHG~g~~~~~~~~~-~~~la~------------------~La~~Gy~Vl~~Dl~-G~ 67 (266)
T TIGR03101 9 HGFRFCLYHPPVAV-GPRGVVIYLPPFAEEMNKSRRM-VALQAR------------------AFAAGGFGVLQIDLY-GC 67 (266)
T ss_pred CCcEEEEEecCCCC-CCceEEEEECCCcccccchhHH-HHHHHH------------------HHHHCCCEEEEECCC-CC
Confidence 46788888877532 23689999998532 111 1 111110 122 23588999977 89
Q ss_pred ccccccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeE
Q 018329 139 GFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFM 218 (358)
Q Consensus 139 GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~ 218 (358)
|.|-+... +. +....++|+..+++ |++... ..+++|+|+|.||..+..+|.+.. -.+++++
T Consensus 68 G~S~g~~~-~~---~~~~~~~Dv~~ai~-~L~~~~---~~~v~LvG~SmGG~vAl~~A~~~p-----------~~v~~lV 128 (266)
T TIGR03101 68 GDSAGDFA-AA---RWDVWKEDVAAAYR-WLIEQG---HPPVTLWGLRLGALLALDAANPLA-----------AKCNRLV 128 (266)
T ss_pred CCCCCccc-cC---CHHHHHHHHHHHHH-HHHhcC---CCCEEEEEECHHHHHHHHHHHhCc-----------cccceEE
Confidence 98854322 11 33344566555443 444332 358999999999998877764321 2378899
Q ss_pred eeccccCCCC
Q 018329 219 IGNAVINDPT 228 (358)
Q Consensus 219 igng~~d~~~ 228 (358)
+-+|.++...
T Consensus 129 L~~P~~~g~~ 138 (266)
T TIGR03101 129 LWQPVVSGKQ 138 (266)
T ss_pred EeccccchHH
Confidence 9998877543
No 39
>PLN02578 hydrolase
Probab=97.29 E-value=0.0018 Score=63.31 Aligned_cols=112 Identities=14% Similarity=0.106 Sum_probs=71.9
Q ss_pred CceEEEEEEeccCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCcccccccc
Q 018329 64 HKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYT 143 (358)
Q Consensus 64 ~~~lfywf~~s~~~~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfSy~ 143 (358)
+.+++|.-.. +.|-||.++|-++.+.. +....+ . +.+..+++.+|.| |.|.|-.
T Consensus 75 ~~~i~Y~~~g------~g~~vvliHG~~~~~~~-w~~~~~-----------~-------l~~~~~v~~~D~~-G~G~S~~ 128 (354)
T PLN02578 75 GHKIHYVVQG------EGLPIVLIHGFGASAFH-WRYNIP-----------E-------LAKKYKVYALDLL-GFGWSDK 128 (354)
T ss_pred CEEEEEEEcC------CCCeEEEECCCCCCHHH-HHHHHH-----------H-------HhcCCEEEEECCC-CCCCCCC
Confidence 4567765322 23457899987665544 433221 1 2234689999988 8888843
Q ss_pred cCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccc
Q 018329 144 NNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAV 223 (358)
Q Consensus 144 ~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~ 223 (358)
.. ..| +.+..++++.+|++... ..+++|+|+|+||..+..+|.+-.+ .++++++.|+.
T Consensus 129 ~~-~~~---~~~~~a~~l~~~i~~~~-------~~~~~lvG~S~Gg~ia~~~A~~~p~-----------~v~~lvLv~~~ 186 (354)
T PLN02578 129 AL-IEY---DAMVWRDQVADFVKEVV-------KEPAVLVGNSLGGFTALSTAVGYPE-----------LVAGVALLNSA 186 (354)
T ss_pred cc-ccc---CHHHHHHHHHHHHHHhc-------cCCeEEEEECHHHHHHHHHHHhChH-----------hcceEEEECCC
Confidence 21 222 45556777777776532 3589999999999987777764322 27888888764
No 40
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=97.19 E-value=0.002 Score=60.80 Aligned_cols=107 Identities=13% Similarity=0.152 Sum_probs=66.5
Q ss_pred CCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCcccccccccCCCcccccCcHHHH
Q 018329 79 SSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTA 158 (358)
Q Consensus 79 ~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a 158 (358)
.++|.||+++|..+.++. |..+.+ .|.. +-.+++-+|.| |.|.|...... .. +.+..+
T Consensus 16 ~~~p~vvliHG~~~~~~~-w~~~~~-----------~L~~------~g~~vi~~dl~-g~G~s~~~~~~-~~--~~~~~~ 73 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWC-WYKIRC-----------LMEN------SGYKVTCIDLK-SAGIDQSDADS-VT--TFDEYN 73 (273)
T ss_pred CCCCeEEEECCCCCCcCc-HHHHHH-----------HHHh------CCCEEEEeccc-CCCCCCCCccc-CC--CHHHHH
Confidence 567999999998776666 543321 1111 12588999988 88876432211 11 445556
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeecccc
Q 018329 159 NDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVI 224 (358)
Q Consensus 159 ~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~ 224 (358)
+++.++|+ .... .++++|+|+||||..+-.++.+.-+ .++++++.++..
T Consensus 74 ~~l~~~i~----~l~~--~~~v~lvGhS~GG~v~~~~a~~~p~-----------~v~~lv~~~~~~ 122 (273)
T PLN02211 74 KPLIDFLS----SLPE--NEKVILVGHSAGGLSVTQAIHRFPK-----------KICLAVYVAATM 122 (273)
T ss_pred HHHHHHHH----hcCC--CCCEEEEEECchHHHHHHHHHhChh-----------heeEEEEecccc
Confidence 66665554 3221 3689999999999977777653221 266777776643
No 41
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.19 E-value=0.0021 Score=62.21 Aligned_cols=134 Identities=15% Similarity=0.172 Sum_probs=84.5
Q ss_pred EEEEEEEecCCCCceEEEEEEeccCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeE
Q 018329 52 HYAGYVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLF 131 (358)
Q Consensus 52 ~ysGyl~v~~~~~~~lfywf~~s~~~~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~ 131 (358)
--+=|+.+... .. -|.++-...+.+.+-++.++|= |++++ +|. .|=.+..+.-||-.
T Consensus 65 ~~~~~v~i~~~--~~--iw~~~~~~~~~~~~plVliHGy-GAg~g---~f~---------------~Nf~~La~~~~vya 121 (365)
T KOG4409|consen 65 YSKKYVRIPNG--IE--IWTITVSNESANKTPLVLIHGY-GAGLG---LFF---------------RNFDDLAKIRNVYA 121 (365)
T ss_pred cceeeeecCCC--ce--eEEEeecccccCCCcEEEEecc-chhHH---HHH---------------HhhhhhhhcCceEE
Confidence 33446666532 22 3444444444666677789973 33332 221 13334555789999
Q ss_pred eecCcccccccccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCce
Q 018329 132 LEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSF 211 (358)
Q Consensus 132 iDqP~G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~ 211 (358)
||.| |-|.|-...- .. +.+.+-+.+.+-+++|....- =.+.+|.|||+||-.....|.+-.++
T Consensus 122 iDll-G~G~SSRP~F---~~-d~~~~e~~fvesiE~WR~~~~---L~KmilvGHSfGGYLaa~YAlKyPer--------- 184 (365)
T KOG4409|consen 122 IDLL-GFGRSSRPKF---SI-DPTTAEKEFVESIEQWRKKMG---LEKMILVGHSFGGYLAAKYALKYPER--------- 184 (365)
T ss_pred eccc-CCCCCCCCCC---CC-CcccchHHHHHHHHHHHHHcC---CcceeEeeccchHHHHHHHHHhChHh---------
Confidence 9966 9999964332 22 333444578999999998763 34799999999998766555444332
Q ss_pred eeeeeeEeeccccCCC
Q 018329 212 INLKGFMIGNAVINDP 227 (358)
Q Consensus 212 inLkGi~igng~~d~~ 227 (358)
++-+++.+||--+.
T Consensus 185 --V~kLiLvsP~Gf~~ 198 (365)
T KOG4409|consen 185 --VEKLILVSPWGFPE 198 (365)
T ss_pred --hceEEEeccccccc
Confidence 67788888887665
No 42
>PLN02965 Probable pheophorbidase
Probab=97.19 E-value=0.0014 Score=60.71 Aligned_cols=101 Identities=15% Similarity=0.212 Sum_probs=63.9
Q ss_pred EEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCcccccccccCCCcccccCcHHHHHHHHH
Q 018329 84 VLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYA 163 (358)
Q Consensus 84 ~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a~~~~~ 163 (358)
||.++|.++.+.. |-...+ .|. .+...++-+|.| |.|.|-......+ +.+..|+|+.+
T Consensus 6 vvllHG~~~~~~~-w~~~~~-----------~L~------~~~~~via~Dl~-G~G~S~~~~~~~~---~~~~~a~dl~~ 63 (255)
T PLN02965 6 FVFVHGASHGAWC-WYKLAT-----------LLD------AAGFKSTCVDLT-GAGISLTDSNTVS---SSDQYNRPLFA 63 (255)
T ss_pred EEEECCCCCCcCc-HHHHHH-----------HHh------hCCceEEEecCC-cCCCCCCCccccC---CHHHHHHHHHH
Confidence 8889998765555 433221 111 123579999977 9999843222111 45666777777
Q ss_pred HHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccc
Q 018329 164 FLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAV 223 (358)
Q Consensus 164 fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~ 223 (358)
+|.. .. ..++++++|+|+||..+..+|.+.-+ .++++++.|+.
T Consensus 64 ~l~~----l~--~~~~~~lvGhSmGG~ia~~~a~~~p~-----------~v~~lvl~~~~ 106 (255)
T PLN02965 64 LLSD----LP--PDHKVILVGHSIGGGSVTEALCKFTD-----------KISMAIYVAAA 106 (255)
T ss_pred HHHh----cC--CCCCEEEEecCcchHHHHHHHHhCch-----------heeEEEEEccc
Confidence 7753 21 12589999999999888877753321 26788887765
No 43
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=97.18 E-value=0.0034 Score=64.24 Aligned_cols=134 Identities=14% Similarity=0.119 Sum_probs=80.2
Q ss_pred ceEEEEEEEecCCCCceEEEEEEeccCCCCCCCeEEEECCCCChhhhhhhh-hhhcCCeEEcCCCCeeecCCCCcccccc
Q 018329 50 FKHYAGYVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGA-AQELGPFLVGGNGSRLKFNKYSWNKAAN 128 (358)
Q Consensus 50 ~~~ysGyl~v~~~~~~~lfywf~~s~~~~~~~pl~lwlnGGPG~Ss~~~g~-~~e~GP~~~~~~~~~l~~n~~sW~~~an 128 (358)
.+.-.-|+..+ +..+||+....... ...|.||+++|.+|.+.. |.. +.+ .+.. .+.+...
T Consensus 174 ~~~~~~~~~~~---~~~l~~~~~gp~~~-~~k~~VVLlHG~~~s~~~-W~~~~~~-----------~L~~---~~~~~yr 234 (481)
T PLN03087 174 CKFCTSWLSSS---NESLFVHVQQPKDN-KAKEDVLFIHGFISSSAF-WTETLFP-----------NFSD---AAKSTYR 234 (481)
T ss_pred cceeeeeEeeC---CeEEEEEEecCCCC-CCCCeEEEECCCCccHHH-HHHHHHH-----------HHHH---HhhCCCE
Confidence 34445677664 46788886554322 224789999999988877 542 110 0110 1334568
Q ss_pred eeEeecCcccccccccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCC
Q 018329 129 MLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGK 208 (358)
Q Consensus 129 ~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~ 208 (358)
++.+|.| |.|.|-......| +.++.++++. +.+.+.. ...+++|.|+|.||..+-.+|.+-.+
T Consensus 235 Via~Dl~-G~G~S~~p~~~~y---tl~~~a~~l~---~~ll~~l---g~~k~~LVGhSmGG~iAl~~A~~~Pe------- 297 (481)
T PLN03087 235 LFAVDLL-GFGRSPKPADSLY---TLREHLEMIE---RSVLERY---KVKSFHIVAHSLGCILALALAVKHPG------- 297 (481)
T ss_pred EEEECCC-CCCCCcCCCCCcC---CHHHHHHHHH---HHHHHHc---CCCCEEEEEECHHHHHHHHHHHhChH-------
Confidence 9999977 8888843211112 3444455543 1233332 34579999999999988777764222
Q ss_pred CceeeeeeeEeeccc
Q 018329 209 DSFINLKGFMIGNAV 223 (358)
Q Consensus 209 ~~~inLkGi~igng~ 223 (358)
.++++++.++.
T Consensus 298 ----~V~~LVLi~~~ 308 (481)
T PLN03087 298 ----AVKSLTLLAPP 308 (481)
T ss_pred ----hccEEEEECCC
Confidence 26788888753
No 44
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=97.18 E-value=0.001 Score=59.31 Aligned_cols=96 Identities=15% Similarity=0.124 Sum_probs=59.5
Q ss_pred CCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCcccccccccCCCcccccCcHHHHHH
Q 018329 81 KPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTAND 160 (358)
Q Consensus 81 ~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a~~ 160 (358)
.|.||+++|.++.+.. +-.+.+ .+ .+..+++.+|.| |.|.|... ..+ +.++.+++
T Consensus 4 ~~~iv~~HG~~~~~~~-~~~~~~-----------~l-------~~~~~vi~~d~~-G~G~s~~~--~~~---~~~~~~~~ 58 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEV-FRCLDE-----------EL-------SAHFTLHLVDLP-GHGRSRGF--GPL---SLADAAEA 58 (245)
T ss_pred CceEEEEcCCCCchhh-HHHHHH-----------hh-------ccCeEEEEecCC-cCccCCCC--CCc---CHHHHHHH
Confidence 4789999998666665 433321 11 223689999966 88887432 111 33344444
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccc
Q 018329 161 SYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAV 223 (358)
Q Consensus 161 ~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~ 223 (358)
+.+. . ..++++.|+|+||..+..+|.+-.+ .++++++.++.
T Consensus 59 ~~~~-------~----~~~~~lvG~S~Gg~~a~~~a~~~p~-----------~v~~~il~~~~ 99 (245)
T TIGR01738 59 IAAQ-------A----PDPAIWLGWSLGGLVALHIAATHPD-----------RVRALVTVASS 99 (245)
T ss_pred HHHh-------C----CCCeEEEEEcHHHHHHHHHHHHCHH-----------hhheeeEecCC
Confidence 3322 1 2479999999999988777753222 16787777665
No 45
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=96.90 E-value=0.0045 Score=55.95 Aligned_cols=55 Identities=11% Similarity=0.090 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeecccc
Q 018329 158 ANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVI 224 (358)
Q Consensus 158 a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~ 224 (358)
..++.++++...++++ ....+++|+|+|.||..+-.++.+ ... .+.++++..|..
T Consensus 76 ~~~~~~~i~~~~~~~~-id~~~i~l~G~S~Gg~~a~~~a~~----~p~-------~~~~~~~~~g~~ 130 (212)
T TIGR01840 76 VESLHQLIDAVKANYS-IDPNRVYVTGLSAGGGMTAVLGCT----YPD-------VFAGGASNAGLP 130 (212)
T ss_pred HHHHHHHHHHHHHhcC-cChhheEEEEECHHHHHHHHHHHh----Cch-------hheEEEeecCCc
Confidence 3444455554444443 445579999999999876555532 111 266777777654
No 46
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=96.81 E-value=0.02 Score=53.92 Aligned_cols=42 Identities=19% Similarity=0.167 Sum_probs=30.3
Q ss_pred CCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCCC
Q 018329 175 FKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDP 227 (358)
Q Consensus 175 ~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~~ 227 (358)
....+++|+|+|.||..+-.+|.+ ... .+++++..+|+.++.
T Consensus 135 ~~~~~~~~~G~S~GG~~a~~~a~~----~p~-------~~~~~~~~~~~~~~~ 176 (275)
T TIGR02821 135 LDGERQGITGHSMGGHGALVIALK----NPD-------RFKSVSAFAPIVAPS 176 (275)
T ss_pred CCCCceEEEEEChhHHHHHHHHHh----Ccc-------cceEEEEECCccCcc
Confidence 445679999999999866655543 111 267999999998764
No 47
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=96.77 E-value=0.0075 Score=58.63 Aligned_cols=77 Identities=14% Similarity=0.093 Sum_probs=51.2
Q ss_pred cccceeEeecCcccccccccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhh
Q 018329 125 KAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNI 204 (358)
Q Consensus 125 ~~an~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~ 204 (358)
+...|+.+|.| |.|-|. ...+ +....|+++.++|+.. .. ++.+.|+|+|+||..+-.+|.+-.++
T Consensus 98 ~~~~Vi~~Dl~-G~g~s~---~~~~---~~~~~a~dl~~ll~~l-----~l-~~~~~lvG~SmGG~vA~~~A~~~P~~-- 162 (343)
T PRK08775 98 ARFRLLAFDFI-GADGSL---DVPI---DTADQADAIALLLDAL-----GI-ARLHAFVGYSYGALVGLQFASRHPAR-- 162 (343)
T ss_pred cccEEEEEeCC-CCCCCC---CCCC---CHHHHHHHHHHHHHHc-----CC-CcceEEEEECHHHHHHHHHHHHChHh--
Confidence 45789999988 655442 1122 3456688888777642 12 23467999999999887777643322
Q ss_pred ccCCCceeeeeeeEeeccccC
Q 018329 205 RAGKDSFINLKGFMIGNAVIN 225 (358)
Q Consensus 205 ~~~~~~~inLkGi~igng~~d 225 (358)
++++++.++...
T Consensus 163 ---------V~~LvLi~s~~~ 174 (343)
T PRK08775 163 ---------VRTLVVVSGAHR 174 (343)
T ss_pred ---------hheEEEECcccc
Confidence 778888887543
No 48
>PRK05855 short chain dehydrogenase; Validated
Probab=96.76 E-value=0.0066 Score=62.58 Aligned_cols=97 Identities=13% Similarity=0.129 Sum_probs=64.8
Q ss_pred CceEEEEEEeccCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCcccccccc
Q 018329 64 HKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYT 143 (358)
Q Consensus 64 ~~~lfywf~~s~~~~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfSy~ 143 (358)
+..+.|+-+. +.+.|.||.++|.++.+.. |..+.+ .+ .+...|+.+|.| |.|.|..
T Consensus 12 g~~l~~~~~g----~~~~~~ivllHG~~~~~~~-w~~~~~-----------~L-------~~~~~Vi~~D~~-G~G~S~~ 67 (582)
T PRK05855 12 GVRLAVYEWG----DPDRPTVVLVHGYPDNHEV-WDGVAP-----------LL-------ADRFRVVAYDVR-GAGRSSA 67 (582)
T ss_pred CEEEEEEEcC----CCCCCeEEEEcCCCchHHH-HHHHHH-----------Hh-------hcceEEEEecCC-CCCCCCC
Confidence 5667776432 2346899999999877766 554432 11 223689999977 9999964
Q ss_pred cCC-CcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHH
Q 018329 144 NNS-EDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVP 193 (358)
Q Consensus 144 ~~~-~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp 193 (358)
... .++ +.+..++|+..+++.. .+ .++++|+|+|+||..+-
T Consensus 68 ~~~~~~~---~~~~~a~dl~~~i~~l---~~---~~~~~lvGhS~Gg~~a~ 109 (582)
T PRK05855 68 PKRTAAY---TLARLADDFAAVIDAV---SP---DRPVHLLAHDWGSIQGW 109 (582)
T ss_pred CCccccc---CHHHHHHHHHHHHHHh---CC---CCcEEEEecChHHHHHH
Confidence 322 122 5677888888888752 11 34699999999995543
No 49
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=96.75 E-value=0.013 Score=56.32 Aligned_cols=135 Identities=17% Similarity=0.166 Sum_probs=89.5
Q ss_pred EEEEEecCCCCceEEEEEEeccCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEee
Q 018329 54 AGYVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLE 133 (358)
Q Consensus 54 sGyl~v~~~~~~~lfywf~~s~~~~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iD 133 (358)
.|+.... ++..++|+.+...+++. .+|++++|.=..+.- |-.+.+ .+..+- ..++=+|
T Consensus 11 ~~~~~~~--d~~~~~~~~~~~~~~~~--g~Vvl~HG~~Eh~~r-y~~la~-----------~l~~~G------~~V~~~D 68 (298)
T COG2267 11 EGYFTGA--DGTRLRYRTWAAPEPPK--GVVVLVHGLGEHSGR-YEELAD-----------DLAARG------FDVYALD 68 (298)
T ss_pred cceeecC--CCceEEEEeecCCCCCC--cEEEEecCchHHHHH-HHHHHH-----------HHHhCC------CEEEEec
Confidence 3444433 36789999888865554 799999998777766 544332 121122 3678889
Q ss_pred cCcccccccccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceee
Q 018329 134 APVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFIN 213 (358)
Q Consensus 134 qP~G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~in 213 (358)
.| |.|-|.. ....... +-.+...|+..|++..-+.+| ..|+||+|+|-||-.+...+.+-. -.
T Consensus 69 ~R-GhG~S~r-~~rg~~~-~f~~~~~dl~~~~~~~~~~~~---~~p~~l~gHSmGg~Ia~~~~~~~~-----------~~ 131 (298)
T COG2267 69 LR-GHGRSPR-GQRGHVD-SFADYVDDLDAFVETIAEPDP---GLPVFLLGHSMGGLIALLYLARYP-----------PR 131 (298)
T ss_pred CC-CCCCCCC-CCcCCch-hHHHHHHHHHHHHHHHhccCC---CCCeEEEEeCcHHHHHHHHHHhCC-----------cc
Confidence 88 9999962 1112221 334555666777766554444 669999999999987766654332 34
Q ss_pred eeeeEeeccccCCC
Q 018329 214 LKGFMIGNAVINDP 227 (358)
Q Consensus 214 LkGi~igng~~d~~ 227 (358)
++|+++-+|++...
T Consensus 132 i~~~vLssP~~~l~ 145 (298)
T COG2267 132 IDGLVLSSPALGLG 145 (298)
T ss_pred ccEEEEECccccCC
Confidence 89999999999886
No 50
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=96.73 E-value=0.013 Score=57.09 Aligned_cols=138 Identities=14% Similarity=0.171 Sum_probs=85.1
Q ss_pred CCceEEEEEEeccCC-C-CCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcc-cccceeEeecCcccc
Q 018329 63 DHKALFYWFFEAQKG-V-SSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWN-KAANMLFLEAPVGVG 139 (358)
Q Consensus 63 ~~~~lfywf~~s~~~-~-~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~-~~an~l~iDqP~G~G 139 (358)
..+.++-+.|..... + .++|++||++||=-|-+.. - . ....+--.+. +.++.+-|= |+
T Consensus 70 ~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~-~-------~-------~~y~~~~~~~a~~~~~vvvS----Vd 130 (336)
T KOG1515|consen 70 PFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSA-N-------S-------PAYDSFCTRLAAELNCVVVS----VD 130 (336)
T ss_pred CCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCC-C-------C-------chhHHHHHHHHHHcCeEEEe----cC
Confidence 367899998888643 4 6899999999996665431 0 0 0000001111 233333321 22
Q ss_pred cccccCCCcccccCcHHHHHHHHHHHHH-HHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeE
Q 018329 140 FSYTNNSEDLHKLGDQVTANDSYAFLIG-WFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFM 218 (358)
Q Consensus 140 fSy~~~~~~~~~~~~~~~a~~~~~fl~~-f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~ 218 (358)
|=-. .+..+.. .-++.-+.+..+++. |.+..-+.++ ++|+|.|-||..+-.+|.++.+.. . ..+.|+|++
T Consensus 131 YRLA-PEh~~Pa-~y~D~~~Al~w~~~~~~~~~~~D~~r--v~l~GDSaGGNia~~va~r~~~~~-~----~~~ki~g~i 201 (336)
T KOG1515|consen 131 YRLA-PEHPFPA-AYDDGWAALKWVLKNSWLKLGADPSR--VFLAGDSAGGNIAHVVAQRAADEK-L----SKPKIKGQI 201 (336)
T ss_pred cccC-CCCCCCc-cchHHHHHHHHHHHhHHHHhCCCccc--EEEEccCccHHHHHHHHHHHhhcc-C----CCcceEEEE
Confidence 2222 2223333 333344455555555 8777766643 999999999999999999998753 1 247799999
Q ss_pred eeccccCCCC
Q 018329 219 IGNAVINDPT 228 (358)
Q Consensus 219 igng~~d~~~ 228 (358)
+.-|++....
T Consensus 202 li~P~~~~~~ 211 (336)
T KOG1515|consen 202 LIYPFFQGTD 211 (336)
T ss_pred EEecccCCCC
Confidence 9999987654
No 51
>PLN02442 S-formylglutathione hydrolase
Probab=96.70 E-value=0.0079 Score=57.13 Aligned_cols=56 Identities=18% Similarity=0.128 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCCC
Q 018329 158 ANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDP 227 (358)
Q Consensus 158 a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~~ 227 (358)
.+++...+..+++. ....+++|+|.|+||+-+-.+|.+ ... .+++++..+|..++.
T Consensus 126 ~~~l~~~i~~~~~~---~~~~~~~i~G~S~GG~~a~~~a~~----~p~-------~~~~~~~~~~~~~~~ 181 (283)
T PLN02442 126 VKELPKLLSDNFDQ---LDTSRASIFGHSMGGHGALTIYLK----NPD-------KYKSVSAFAPIANPI 181 (283)
T ss_pred HHHHHHHHHHHHHh---cCCCceEEEEEChhHHHHHHHHHh----Cch-------hEEEEEEECCccCcc
Confidence 44555566665543 345579999999999755544432 221 278899999998865
No 52
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=96.66 E-value=0.012 Score=68.59 Aligned_cols=107 Identities=18% Similarity=0.235 Sum_probs=69.5
Q ss_pred CCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCcccccccccCC-----Cccccc
Q 018329 78 VSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNS-----EDLHKL 152 (358)
Q Consensus 78 ~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfSy~~~~-----~~~~~~ 152 (358)
....|.||+|+|.+|.+.. |..+.+ .+ .+..+++.+|.| |.|.|..... .... .
T Consensus 1368 ~~~~~~vVllHG~~~s~~~-w~~~~~-----------~L-------~~~~rVi~~Dl~-G~G~S~~~~~~~~~~~~~~-~ 1426 (1655)
T PLN02980 1368 NAEGSVVLFLHGFLGTGED-WIPIMK-----------AI-------SGSARCISIDLP-GHGGSKIQNHAKETQTEPT-L 1426 (1655)
T ss_pred CCCCCeEEEECCCCCCHHH-HHHHHH-----------HH-------hCCCEEEEEcCC-CCCCCCCcccccccccccc-C
Confidence 3456899999999999887 544332 11 233689999977 8888854221 0111 1
Q ss_pred CcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccc
Q 018329 153 GDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAV 223 (358)
Q Consensus 153 ~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~ 223 (358)
+.+..|+++.++++. +...+++|+|+|+||..+-.+|.+--+ .++++++.+|.
T Consensus 1427 si~~~a~~l~~ll~~-------l~~~~v~LvGhSmGG~iAl~~A~~~P~-----------~V~~lVlis~~ 1479 (1655)
T PLN02980 1427 SVELVADLLYKLIEH-------ITPGKVTLVGYSMGARIALYMALRFSD-----------KIEGAVIISGS 1479 (1655)
T ss_pred CHHHHHHHHHHHHHH-------hCCCCEEEEEECHHHHHHHHHHHhChH-----------hhCEEEEECCC
Confidence 445666666666653 234589999999999987777653322 26777777664
No 53
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=96.58 E-value=0.0031 Score=56.08 Aligned_cols=77 Identities=18% Similarity=0.231 Sum_probs=50.4
Q ss_pred ceeEeecCcccccccccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccC
Q 018329 128 NMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAG 207 (358)
Q Consensus 128 n~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~ 207 (358)
+|+-+|+| |.|+|....... ...-..+++.+.+..+.++.+ .++++++|+|+||..+-.+|..-.+
T Consensus 2 ~vi~~d~r-G~g~S~~~~~~~----~~~~~~~~~~~~~~~~~~~l~---~~~~~~vG~S~Gg~~~~~~a~~~p~------ 67 (230)
T PF00561_consen 2 DVILFDLR-GFGYSSPHWDPD----FPDYTTDDLAADLEALREALG---IKKINLVGHSMGGMLALEYAAQYPE------ 67 (230)
T ss_dssp EEEEEECT-TSTTSSSCCGSG----SCTHCHHHHHHHHHHHHHHHT---TSSEEEEEETHHHHHHHHHHHHSGG------
T ss_pred EEEEEeCC-CCCCCCCCccCC----cccccHHHHHHHHHHHHHHhC---CCCeEEEEECCChHHHHHHHHHCch------
Confidence 57889966 999996300011 122334566666666666655 3459999999999877666643221
Q ss_pred CCceeeeeeeEeeccc
Q 018329 208 KDSFINLKGFMIGNAV 223 (358)
Q Consensus 208 ~~~~inLkGi~igng~ 223 (358)
.++++++.++.
T Consensus 68 -----~v~~lvl~~~~ 78 (230)
T PF00561_consen 68 -----RVKKLVLISPP 78 (230)
T ss_dssp -----GEEEEEEESES
T ss_pred -----hhcCcEEEeee
Confidence 38899888885
No 54
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=96.44 E-value=0.032 Score=53.20 Aligned_cols=129 Identities=16% Similarity=0.119 Sum_probs=83.6
Q ss_pred CCceEEEEEEeccCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCccccccc
Q 018329 63 DHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSY 142 (358)
Q Consensus 63 ~~~~lfywf~~s~~~~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfSy 142 (358)
.+..+|.-....+..++-+-+|+.++|.=+=||..+--+.. +++. +- .-+-.+|++ |.|.|-
T Consensus 36 rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~----~l~~-------~g------~~v~a~D~~-GhG~Sd 97 (313)
T KOG1455|consen 36 RGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAK----RLAK-------SG------FAVYAIDYE-GHGRSD 97 (313)
T ss_pred CCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHH----HHHh-------CC------CeEEEeecc-CCCcCC
Confidence 36789966555544456677999999965554331221110 1111 11 135678866 999996
Q ss_pred ccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeecc
Q 018329 143 TNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNA 222 (358)
Q Consensus 143 ~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng 222 (358)
+ ...|.. +-+.+++|...|+..+- ..++++..|.|++|||-||-.+-.++.+ .. --..|+++..|
T Consensus 98 G--l~~yi~-~~d~~v~D~~~~~~~i~-~~~e~~~lp~FL~GeSMGGAV~Ll~~~k----~p-------~~w~G~ilvaP 162 (313)
T KOG1455|consen 98 G--LHAYVP-SFDLVVDDVISFFDSIK-EREENKGLPRFLFGESMGGAVALLIALK----DP-------NFWDGAILVAP 162 (313)
T ss_pred C--CcccCC-cHHHHHHHHHHHHHHHh-hccccCCCCeeeeecCcchHHHHHHHhh----CC-------cccccceeeec
Confidence 4 334544 77788889888888754 4568889999999999999876666544 11 12668777777
Q ss_pred cc
Q 018329 223 VI 224 (358)
Q Consensus 223 ~~ 224 (358)
+.
T Consensus 163 mc 164 (313)
T KOG1455|consen 163 MC 164 (313)
T ss_pred cc
Confidence 65
No 55
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.42 E-value=0.015 Score=51.09 Aligned_cols=104 Identities=20% Similarity=0.217 Sum_probs=62.8
Q ss_pred CCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCcccccccccCCCcccccCcHHHHHH
Q 018329 81 KPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTAND 160 (358)
Q Consensus 81 ~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a~~ 160 (358)
.|.+++++|+|+++.. +....+ .+..... + .+++.+|+| |.|.|. .. .+ .....+++
T Consensus 21 ~~~i~~~hg~~~~~~~-~~~~~~-----------~~~~~~~---~-~~~~~~d~~-g~g~s~-~~--~~---~~~~~~~~ 77 (282)
T COG0596 21 GPPLVLLHGFPGSSSV-WRPVFK-----------VLPALAA---R-YRVIAPDLR-GHGRSD-PA--GY---SLSAYADD 77 (282)
T ss_pred CCeEEEeCCCCCchhh-hHHHHH-----------Hhhcccc---c-eEEEEeccc-CCCCCC-cc--cc---cHHHHHHH
Confidence 6699999999999988 443110 0000111 1 799999999 999996 11 11 11222444
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccC
Q 018329 161 SYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVIN 225 (358)
Q Consensus 161 ~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d 225 (358)
+..+++ .. ...++++.|+|+||..+-.++.+..+ .++++++.++...
T Consensus 78 ~~~~~~----~~---~~~~~~l~G~S~Gg~~~~~~~~~~p~-----------~~~~~v~~~~~~~ 124 (282)
T COG0596 78 LAALLD----AL---GLEKVVLVGHSMGGAVALALALRHPD-----------RVRGLVLIGPAPP 124 (282)
T ss_pred HHHHHH----Hh---CCCceEEEEecccHHHHHHHHHhcch-----------hhheeeEecCCCC
Confidence 444444 32 22349999999997766665554433 2667777776554
No 56
>PRK10566 esterase; Provisional
Probab=96.41 E-value=0.019 Score=52.58 Aligned_cols=108 Identities=13% Similarity=0.134 Sum_probs=59.9
Q ss_pred EEEEeccCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccc-cceeEeecCcccccccccCCC
Q 018329 69 YWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKA-ANMLFLEAPVGVGFSYTNNSE 147 (358)
Q Consensus 69 ywf~~s~~~~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~-an~l~iDqP~G~GfSy~~~~~ 147 (358)
|-++++.......|+||.++|++|.... +..+.. .+.+. .+++.+|.| |.|-|+.....
T Consensus 15 ~~~~p~~~~~~~~p~vv~~HG~~~~~~~-~~~~~~------------------~l~~~G~~v~~~d~~-g~G~~~~~~~~ 74 (249)
T PRK10566 15 LHAFPAGQRDTPLPTVFFYHGFTSSKLV-YSYFAV------------------ALAQAGFRVIMPDAP-MHGARFSGDEA 74 (249)
T ss_pred EEEcCCCCCCCCCCEEEEeCCCCcccch-HHHHHH------------------HHHhCCCEEEEecCC-cccccCCCccc
Confidence 3333443223456999999999887654 332211 12222 478888866 66655432111
Q ss_pred c-cc--ccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHH
Q 018329 148 D-LH--KLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAE 197 (358)
Q Consensus 148 ~-~~--~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~ 197 (358)
. .. ........+++..++ .++...+.....+++|+|+|+||..+-.++.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~ 126 (249)
T PRK10566 75 RRLNHFWQILLQNMQEFPTLR-AAIREEGWLLDDRLAVGGASMGGMTALGIMA 126 (249)
T ss_pred cchhhHHHHHHHHHHHHHHHH-HHHHhcCCcCccceeEEeecccHHHHHHHHH
Confidence 0 00 000112344554444 4444455455678999999999998876654
No 57
>PLN02511 hydrolase
Probab=96.40 E-value=0.0085 Score=59.61 Aligned_cols=114 Identities=18% Similarity=0.179 Sum_probs=67.9
Q ss_pred EEEecCCCCceEEEEEEec--cCCCCCCCeEEEECCCCChhhhhhh-hhhhcCCeEEcCCCCeeecCCCCcccccceeEe
Q 018329 56 YVKLRPNDHKALFYWFFEA--QKGVSSKPLVLWLNGGPGCSSIAYG-AAQELGPFLVGGNGSRLKFNKYSWNKAANMLFL 132 (358)
Q Consensus 56 yl~v~~~~~~~lfywf~~s--~~~~~~~pl~lwlnGGPG~Ss~~~g-~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~i 132 (358)
++... ++..+.+.++.. ...+.+.|+||.++|..|+|...+- .+.. .+ ..+-.+++-+
T Consensus 75 ~l~~~--DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~-----------~~------~~~g~~vv~~ 135 (388)
T PLN02511 75 CLRTP--DGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLL-----------RA------RSKGWRVVVF 135 (388)
T ss_pred EEECC--CCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHH-----------HH------HHCCCEEEEE
Confidence 55554 345565543432 2235678999999999888642111 1110 00 1233478999
Q ss_pred ecCcccccccccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHH
Q 018329 133 EAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLA 196 (358)
Q Consensus 133 DqP~G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la 196 (358)
|.| |.|-|-......+ ....++|+.++++..-.++| ..+++++|+|.||..+-.++
T Consensus 136 d~r-G~G~s~~~~~~~~----~~~~~~Dl~~~i~~l~~~~~---~~~~~lvG~SlGg~i~~~yl 191 (388)
T PLN02511 136 NSR-GCADSPVTTPQFY----SASFTGDLRQVVDHVAGRYP---SANLYAAGWSLGANILVNYL 191 (388)
T ss_pred ecC-CCCCCCCCCcCEE----cCCchHHHHHHHHHHHHHCC---CCCEEEEEechhHHHHHHHH
Confidence 976 8887753222212 12335677777766656666 46899999999998755444
No 58
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=96.39 E-value=0.0072 Score=56.89 Aligned_cols=109 Identities=25% Similarity=0.393 Sum_probs=74.3
Q ss_pred CCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCcccccccccCCCcccccCcHHHHH
Q 018329 80 SKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTAN 159 (358)
Q Consensus 80 ~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a~ 159 (358)
.-|+++.++|| |.|.|.|..|.- .+..+- ..-++-+| --|.|=+-..++.+. +-+..++
T Consensus 73 ~gpil~l~HG~-G~S~LSfA~~a~-----------el~s~~-----~~r~~a~D-lRgHGeTk~~~e~dl---S~eT~~K 131 (343)
T KOG2564|consen 73 EGPILLLLHGG-GSSALSFAIFAS-----------ELKSKI-----RCRCLALD-LRGHGETKVENEDDL---SLETMSK 131 (343)
T ss_pred CccEEEEeecC-cccchhHHHHHH-----------HHHhhc-----ceeEEEee-ccccCccccCChhhc---CHHHHHH
Confidence 45999999988 999988777641 111110 11237788 448888876655553 6788999
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccc
Q 018329 160 DSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAV 223 (358)
Q Consensus 160 ~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~ 223 (358)
|+...++++|..-| -+++|+|||-||-...+.|.. + .--+|-|+.+.+=+
T Consensus 132 D~~~~i~~~fge~~----~~iilVGHSmGGaIav~~a~~-----k-----~lpsl~Gl~viDVV 181 (343)
T KOG2564|consen 132 DFGAVIKELFGELP----PQIILVGHSMGGAIAVHTAAS-----K-----TLPSLAGLVVIDVV 181 (343)
T ss_pred HHHHHHHHHhccCC----CceEEEeccccchhhhhhhhh-----h-----hchhhhceEEEEEe
Confidence 99999998884433 269999999999887555531 1 12348888887633
No 59
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.27 E-value=0.0058 Score=57.93 Aligned_cols=112 Identities=13% Similarity=0.136 Sum_probs=66.0
Q ss_pred CCCCeEEEECCCCChh-hhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCcccccccccCCCcccccCcHHH
Q 018329 79 SSKPLVLWLNGGPGCS-SIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVT 157 (358)
Q Consensus 79 ~~~pl~lwlnGGPG~S-s~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfSy~~~~~~~~~~~~~~~ 157 (358)
.+.|++|+++|-.|.. .. +-.. + .+.+.-..-.||+.||-+.+..-.|.. ...+...+
T Consensus 34 ~~~p~vilIHG~~~~~~~~-~~~~--------------l-~~~ll~~~~~nVi~vD~~~~~~~~y~~-----a~~~~~~v 92 (275)
T cd00707 34 PSRPTRFIIHGWTSSGEES-WISD--------------L-RKAYLSRGDYNVIVVDWGRGANPNYPQ-----AVNNTRVV 92 (275)
T ss_pred CCCCcEEEEcCCCCCCCCc-HHHH--------------H-HHHHHhcCCCEEEEEECccccccChHH-----HHHhHHHH
Confidence 3578999999976644 22 1000 0 000111134789999966441111110 00134556
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccc
Q 018329 158 ANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAV 223 (358)
Q Consensus 158 a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~ 223 (358)
++++..+|+...+.. .+...+++|+|+|.||+.+-.+|.+..+ +++.|+..+|.
T Consensus 93 ~~~la~~l~~L~~~~-g~~~~~i~lIGhSlGa~vAg~~a~~~~~-----------~v~~iv~LDPa 146 (275)
T cd00707 93 GAELAKFLDFLVDNT-GLSLENVHLIGHSLGAHVAGFAGKRLNG-----------KLGRITGLDPA 146 (275)
T ss_pred HHHHHHHHHHHHHhc-CCChHHEEEEEecHHHHHHHHHHHHhcC-----------ccceeEEecCC
Confidence 777777777665543 2334579999999999998888875422 37788887765
No 60
>PRK10985 putative hydrolase; Provisional
Probab=96.08 E-value=0.027 Score=54.42 Aligned_cols=108 Identities=17% Similarity=0.125 Sum_probs=54.1
Q ss_pred CceEEEEEEeccCCCCCCCeEEEECCCCChhhhhhhh-hhhcCCeEEcCCCCeeecCCCCcccccceeEeecCccccccc
Q 018329 64 HKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGA-AQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSY 142 (358)
Q Consensus 64 ~~~lfywf~~s~~~~~~~pl~lwlnGGPG~Ss~~~g~-~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfSy 142 (358)
+..+.+++.+....+..+|+||.++|.+|.+...+.. +.+ .+... -.+++-+|.+ |.|=|-
T Consensus 41 g~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~-----------~l~~~------G~~v~~~d~r-G~g~~~ 102 (324)
T PRK10985 41 GDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLE-----------AAQKR------GWLGVVMHFR-GCSGEP 102 (324)
T ss_pred CCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHH-----------HHHHC------CCEEEEEeCC-CCCCCc
Confidence 4455444333323345689999999999875321111 110 11111 1245666754 554332
Q ss_pred ccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHH
Q 018329 143 TNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLA 196 (358)
Q Consensus 143 ~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la 196 (358)
......+.. .. .+|+..+++..-++++ ..+++++|+|.||..+-..+
T Consensus 103 ~~~~~~~~~-~~---~~D~~~~i~~l~~~~~---~~~~~~vG~S~GG~i~~~~~ 149 (324)
T PRK10985 103 NRLHRIYHS-GE---TEDARFFLRWLQREFG---HVPTAAVGYSLGGNMLACLL 149 (324)
T ss_pred cCCcceECC-Cc---hHHHHHHHHHHHHhCC---CCCEEEEEecchHHHHHHHH
Confidence 111111211 22 3444444433223454 45799999999998654444
No 61
>PRK07581 hypothetical protein; Validated
Probab=96.03 E-value=0.038 Score=53.44 Aligned_cols=129 Identities=11% Similarity=0.018 Sum_probs=68.7
Q ss_pred CceEEEEEEeccCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCcccccccc
Q 018329 64 HKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYT 143 (358)
Q Consensus 64 ~~~lfywf~~s~~~~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfSy~ 143 (358)
+..++|--... ..+..+|+||.++|++|.+.+ +......||- +. .+...||-+|.| |.|.|-.
T Consensus 25 ~~~l~y~~~G~-~~~~~~~~vll~~~~~~~~~~-~~~~~~~~~~--------l~------~~~~~vi~~D~~-G~G~S~~ 87 (339)
T PRK07581 25 DARLAYKTYGT-LNAAKDNAILYPTWYSGTHQD-NEWLIGPGRA--------LD------PEKYFIIIPNMF-GNGLSSS 87 (339)
T ss_pred CceEEEEecCc-cCCCCCCEEEEeCCCCCCccc-chhhccCCCc--------cC------cCceEEEEecCC-CCCCCCC
Confidence 45677653322 133456888887666554444 2211111111 11 234689999988 9999853
Q ss_pred cCCC--cccc--cCcHHHHHHHHHHHHHHHHHCCCCCCCC-eEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeE
Q 018329 144 NNSE--DLHK--LGDQVTANDSYAFLIGWFKRFPNFKSHD-FYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFM 218 (358)
Q Consensus 144 ~~~~--~~~~--~~~~~~a~~~~~fl~~f~~~fp~~~~~~-~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~ 218 (358)
.... .|.. ......++++........+. +.-.+ .+|+|.|+||..+-.+|.+--++ +++++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---lgi~~~~~lvG~S~GG~va~~~a~~~P~~-----------V~~Lv 153 (339)
T PRK07581 88 PSNTPAPFNAARFPHVTIYDNVRAQHRLLTEK---FGIERLALVVGWSMGAQQTYHWAVRYPDM-----------VERAA 153 (339)
T ss_pred CCCCCCCCCCCCCCceeHHHHHHHHHHHHHHH---hCCCceEEEEEeCHHHHHHHHHHHHCHHH-----------Hhhhe
Confidence 3211 1110 01122445554422222222 22346 57899999999988888765443 66667
Q ss_pred eeccc
Q 018329 219 IGNAV 223 (358)
Q Consensus 219 igng~ 223 (358)
+.++.
T Consensus 154 li~~~ 158 (339)
T PRK07581 154 PIAGT 158 (339)
T ss_pred eeecC
Confidence 66654
No 62
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=95.98 E-value=0.017 Score=60.04 Aligned_cols=130 Identities=15% Similarity=0.093 Sum_probs=76.0
Q ss_pred CCceEEEEEEeccCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcc-cccceeEeecCcccccc
Q 018329 63 DHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWN-KAANMLFLEAPVGVGFS 141 (358)
Q Consensus 63 ~~~~lfywf~~s~~~~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~-~~an~l~iDqP~G~GfS 141 (358)
++..|+..++.... ....|+||.++|-...+... ... + . ....-|. +-..++-+|. -|.|.|
T Consensus 5 DG~~L~~~~~~P~~-~~~~P~Il~~~gyg~~~~~~-~~~-~----~---------~~~~~l~~~Gy~vv~~D~-RG~g~S 67 (550)
T TIGR00976 5 DGTRLAIDVYRPAG-GGPVPVILSRTPYGKDAGLR-WGL-D----K---------TEPAWFVAQGYAVVIQDT-RGRGAS 67 (550)
T ss_pred CCCEEEEEEEecCC-CCCCCEEEEecCCCCchhhc-ccc-c----c---------ccHHHHHhCCcEEEEEec-cccccC
Confidence 36678876665432 34579999999643322210 000 0 0 0001122 2457889995 499999
Q ss_pred cccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeec
Q 018329 142 YTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGN 221 (358)
Q Consensus 142 y~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~ign 221 (358)
-+.... + + ...++|+.++++ |+.+.|. .+.++.++|.||||...-.+|. ... -.||+++..+
T Consensus 68 ~g~~~~-~---~-~~~~~D~~~~i~-~l~~q~~-~~~~v~~~G~S~GG~~a~~~a~----~~~-------~~l~aiv~~~ 129 (550)
T TIGR00976 68 EGEFDL-L---G-SDEAADGYDLVD-WIAKQPW-CDGNVGMLGVSYLAVTQLLAAV----LQP-------PALRAIAPQE 129 (550)
T ss_pred CCceEe-c---C-cccchHHHHHHH-HHHhCCC-CCCcEEEEEeChHHHHHHHHhc----cCC-------CceeEEeecC
Confidence 653211 1 2 345667776665 6666663 3458999999999976444442 111 2489999988
Q ss_pred cccCCC
Q 018329 222 AVINDP 227 (358)
Q Consensus 222 g~~d~~ 227 (358)
++.|..
T Consensus 130 ~~~d~~ 135 (550)
T TIGR00976 130 GVWDLY 135 (550)
T ss_pred cccchh
Confidence 887753
No 63
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=95.85 E-value=0.023 Score=55.30 Aligned_cols=152 Identities=14% Similarity=0.153 Sum_probs=84.9
Q ss_pred CCceEEEEEEeccCCCCCCCeEEEECCCCChhhhhhhhhh---h----cCCeEEcCCCCeeecC---CCCc-ccccceeE
Q 018329 63 DHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQ---E----LGPFLVGGNGSRLKFN---KYSW-NKAANMLF 131 (358)
Q Consensus 63 ~~~~lfywf~~s~~~~~~~pl~lwlnGGPG~Ss~~~g~~~---e----~GP~~~~~~~~~l~~n---~~sW-~~~an~l~ 131 (358)
++..++++..+.. + .+.+|+.++|==+-+.. -.+. | -+|+.++.+. -..++ -..+ .+-..|+-
T Consensus 6 ~g~~l~~~~~~~~-~--~kg~v~i~HG~~eh~~~--~~~~~~~~~~~~~~~~~~~~~r-y~~y~~~~~~~l~~~G~~V~~ 79 (332)
T TIGR01607 6 DGLLLKTYSWIVK-N--AIGIIVLIHGLKSHLRL--QFLKINAKIVNNDRAVLIDTDN-YYIYKDSWIENFNKNGYSVYG 79 (332)
T ss_pred CCCeEEEeeeecc-C--CeEEEEEECCCchhhhh--hhhhcCcccCCCCeeEEEcCCc-ceEeeHHHHHHHHHCCCcEEE
Confidence 3567777766553 2 35799999984333332 1111 1 1233343221 00011 0122 23468999
Q ss_pred eecCcccccccccCC-CcccccCcHHHHHHHHHHHHHHHHHC----------------CCCC-CCCeEEeccccCCccHH
Q 018329 132 LEAPVGVGFSYTNNS-EDLHKLGDQVTANDSYAFLIGWFKRF----------------PNFK-SHDFYIAGESYAGHYVP 193 (358)
Q Consensus 132 iDqP~G~GfSy~~~~-~~~~~~~~~~~a~~~~~fl~~f~~~f----------------p~~~-~~~~yi~GeSYgG~yvp 193 (358)
+|.| |.|.|-+... ..+.. +-+..++|+..+++..-+.. .++. +.|++|.|+|.||..+-
T Consensus 80 ~D~r-GHG~S~~~~~~~g~~~-~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~ 157 (332)
T TIGR01607 80 LDLQ-GHGESDGLQNLRGHIN-CFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIAL 157 (332)
T ss_pred eccc-ccCCCccccccccchh-hHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHH
Confidence 9975 9999875422 11111 45667788888887654310 0222 56899999999999877
Q ss_pred HHHHHHHHHhhccCCCceeeeeeeEeeccccC
Q 018329 194 QLAELIHERNIRAGKDSFINLKGFMIGNAVIN 225 (358)
Q Consensus 194 ~la~~i~~~~~~~~~~~~inLkGi~igng~~d 225 (358)
.++...-+.... ..+..++|+++..|++.
T Consensus 158 ~~~~~~~~~~~~---~~~~~i~g~i~~s~~~~ 186 (332)
T TIGR01607 158 RLLELLGKSNEN---NDKLNIKGCISLSGMIS 186 (332)
T ss_pred HHHHHhcccccc---ccccccceEEEeccceE
Confidence 766544321100 01235899988888764
No 64
>PRK10115 protease 2; Provisional
Probab=95.84 E-value=0.028 Score=60.19 Aligned_cols=143 Identities=14% Similarity=0.041 Sum_probs=78.0
Q ss_pred EEecCCCCceEEEEEEeccC--CCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccc-eeEee
Q 018329 57 VKLRPNDHKALFYWFFEAQK--GVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAAN-MLFLE 133 (358)
Q Consensus 57 l~v~~~~~~~lfywf~~s~~--~~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an-~l~iD 133 (358)
+.+...+|..+-.|++-... .....|++|+.+||||.+... ++..+. .+|....= +++..
T Consensus 419 v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p-~f~~~~----------------~~l~~rG~~v~~~n 481 (686)
T PRK10115 419 LWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDA-DFSFSR----------------LSLLDRGFVYAIVH 481 (686)
T ss_pred EEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCC-CccHHH----------------HHHHHCCcEEEEEE
Confidence 33433456777776554322 234569999999999999652 332221 12333322 23333
Q ss_pred cCcccccccccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceee
Q 018329 134 APVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFIN 213 (358)
Q Consensus 134 qP~G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~in 213 (358)
-.=|+||...-....... .-...-+|+.++.+...+ ..--....+.|.|-||||.-+-.+ +.+... .
T Consensus 482 ~RGs~g~G~~w~~~g~~~-~k~~~~~D~~a~~~~Lv~-~g~~d~~rl~i~G~S~GG~l~~~~----~~~~Pd-------l 548 (686)
T PRK10115 482 VRGGGELGQQWYEDGKFL-KKKNTFNDYLDACDALLK-LGYGSPSLCYGMGGSAGGMLMGVA----INQRPE-------L 548 (686)
T ss_pred cCCCCccCHHHHHhhhhh-cCCCcHHHHHHHHHHHHH-cCCCChHHeEEEEECHHHHHHHHH----HhcChh-------h
Confidence 233455543211110000 111234666666654433 333345679999999999844433 322211 2
Q ss_pred eeeeEeeccccCCCCC
Q 018329 214 LKGFMIGNAVINDPTD 229 (358)
Q Consensus 214 LkGi~igng~~d~~~q 229 (358)
++.++.+.|++|....
T Consensus 549 f~A~v~~vp~~D~~~~ 564 (686)
T PRK10115 549 FHGVIAQVPFVDVVTT 564 (686)
T ss_pred eeEEEecCCchhHhhh
Confidence 9999999999998643
No 65
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=95.81 E-value=0.067 Score=50.38 Aligned_cols=79 Identities=18% Similarity=0.156 Sum_probs=53.6
Q ss_pred cceeEeecCcccccccccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhcc
Q 018329 127 ANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRA 206 (358)
Q Consensus 127 an~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~ 206 (358)
.+++-+|.| |.|-|-... . +-....+|+.++++.+-+..|.+ .+++++|+|.||..+-.+|. ..
T Consensus 58 ~~v~~~Dl~-G~G~S~~~~----~--~~~~~~~d~~~~~~~l~~~~~g~--~~i~l~G~S~Gg~~a~~~a~----~~--- 121 (274)
T TIGR03100 58 FPVLRFDYR-GMGDSEGEN----L--GFEGIDADIAAAIDAFREAAPHL--RRIVAWGLCDAASAALLYAP----AD--- 121 (274)
T ss_pred CEEEEeCCC-CCCCCCCCC----C--CHHHHHHHHHHHHHHHHhhCCCC--CcEEEEEECHHHHHHHHHhh----hC---
Confidence 588999987 999885321 1 33445677777777655555544 35999999999975444432 11
Q ss_pred CCCceeeeeeeEeeccccCC
Q 018329 207 GKDSFINLKGFMIGNAVIND 226 (358)
Q Consensus 207 ~~~~~inLkGi~igng~~d~ 226 (358)
-.++|+++.||++..
T Consensus 122 -----~~v~~lil~~p~~~~ 136 (274)
T TIGR03100 122 -----LRVAGLVLLNPWVRT 136 (274)
T ss_pred -----CCccEEEEECCccCC
Confidence 238999999999764
No 66
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=95.81 E-value=0.048 Score=55.18 Aligned_cols=80 Identities=15% Similarity=0.164 Sum_probs=52.1
Q ss_pred ccceeEeecCcccccc-cccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhh
Q 018329 126 AANMLFLEAPVGVGFS-YTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNI 204 (358)
Q Consensus 126 ~an~l~iDqP~G~GfS-y~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~ 204 (358)
..||+-+|-|-+ |-| |.. .. . +...+|+++.++|+...+.. .+.-.+++|+|+|.|||.+-.+|.+.-
T Consensus 73 d~nVI~VDw~g~-g~s~y~~-a~---~-~t~~vg~~la~lI~~L~~~~-gl~l~~VhLIGHSLGAhIAg~ag~~~p---- 141 (442)
T TIGR03230 73 SANVIVVDWLSR-AQQHYPT-SA---A-YTKLVGKDVAKFVNWMQEEF-NYPWDNVHLLGYSLGAHVAGIAGSLTK---- 141 (442)
T ss_pred CCEEEEEECCCc-CCCCCcc-cc---c-cHHHHHHHHHHHHHHHHHhh-CCCCCcEEEEEECHHHHHHHHHHHhCC----
Confidence 369999998733 322 211 11 1 44677888888887554433 344568999999999998887765321
Q ss_pred ccCCCceeeeeeeEeeccc
Q 018329 205 RAGKDSFINLKGFMIGNAV 223 (358)
Q Consensus 205 ~~~~~~~inLkGi~igng~ 223 (358)
-.|..|+..+|.
T Consensus 142 -------~rV~rItgLDPA 153 (442)
T TIGR03230 142 -------HKVNRITGLDPA 153 (442)
T ss_pred -------cceeEEEEEcCC
Confidence 126778877764
No 67
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=95.65 E-value=0.091 Score=51.96 Aligned_cols=138 Identities=12% Similarity=0.006 Sum_probs=73.5
Q ss_pred CceEEEEEEeccCCCCCCCeEEEECCCCChhhhhhhhh--hhcCCeEEcCCCCeeecCCCCcccccceeEeecCcccccc
Q 018329 64 HKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAA--QELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFS 141 (358)
Q Consensus 64 ~~~lfywf~~s~~~~~~~pl~lwlnGGPG~Ss~~~g~~--~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfS 141 (358)
+.+++|+-+-. .++...|.||.++|-+|.+.. +... .+.+|=.+.. .+.....--.+...||-+|.|-+.|.|
T Consensus 32 ~~~~~y~~~G~-~~~~~~p~vvl~HG~~~~~~~-~~~~~~~~~~~~~w~~---~~~~~~~l~~~~~~vi~~Dl~G~~~~s 106 (379)
T PRK00175 32 PVELAYETYGT-LNADRSNAVLICHALTGDHHV-AGPHSPDDPKPGWWDN---MVGPGKPIDTDRYFVICSNVLGGCKGS 106 (379)
T ss_pred CceEEEEeccc-cCCCCCCEEEEeCCcCCchhh-cccccccCCCCcchhh---ccCCCCccCccceEEEeccCCCCCCCC
Confidence 45788874421 123346999999999988765 3211 0000000000 000000000234589999987544555
Q ss_pred cccCC------C----cccccCcHHHHHHHHHHHHHHHHHCCCCCCCC-eEEeccccCCccHHHHHHHHHHHhhccCCCc
Q 018329 142 YTNNS------E----DLHKLGDQVTANDSYAFLIGWFKRFPNFKSHD-FYIAGESYAGHYVPQLAELIHERNIRAGKDS 210 (358)
Q Consensus 142 y~~~~------~----~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~-~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~ 210 (358)
.+... . ++...+.+..++++.++|+. . .-.+ .+|+|+|+||..+-.+|.+--+
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----l---~~~~~~~lvG~S~Gg~ia~~~a~~~p~--------- 170 (379)
T PRK00175 107 TGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDA----L---GITRLAAVVGGSMGGMQALEWAIDYPD--------- 170 (379)
T ss_pred CCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHH----h---CCCCceEEEEECHHHHHHHHHHHhChH---------
Confidence 43211 0 00011445555666655543 2 2335 5899999999888777765332
Q ss_pred eeeeeeeEeecccc
Q 018329 211 FINLKGFMIGNAVI 224 (358)
Q Consensus 211 ~inLkGi~igng~~ 224 (358)
.++++++.|+..
T Consensus 171 --~v~~lvl~~~~~ 182 (379)
T PRK00175 171 --RVRSALVIASSA 182 (379)
T ss_pred --hhhEEEEECCCc
Confidence 278888888653
No 68
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=95.53 E-value=0.0088 Score=53.80 Aligned_cols=93 Identities=16% Similarity=0.100 Sum_probs=60.4
Q ss_pred ccceeEeecCcccccccccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhc
Q 018329 126 AANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIR 205 (358)
Q Consensus 126 ~an~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~ 205 (358)
=..|+.+|.+-+.||+..-....... .-....+|+.++++..-++. ......+.|+|.||||+-+-.++. +. .
T Consensus 14 Gy~v~~~~~rGs~g~g~~~~~~~~~~-~~~~~~~D~~~~i~~l~~~~-~iD~~ri~i~G~S~GG~~a~~~~~---~~-~- 86 (213)
T PF00326_consen 14 GYAVLVPNYRGSGGYGKDFHEAGRGD-WGQADVDDVVAAIEYLIKQY-YIDPDRIGIMGHSYGGYLALLAAT---QH-P- 86 (213)
T ss_dssp T-EEEEEE-TTSSSSHHHHHHTTTTG-TTHHHHHHHHHHHHHHHHTT-SEEEEEEEEEEETHHHHHHHHHHH---HT-C-
T ss_pred CEEEEEEcCCCCCccchhHHHhhhcc-ccccchhhHHHHHHHHhccc-cccceeEEEEcccccccccchhhc---cc-c-
Confidence 35789999888888776422211111 23456777887777654444 555678999999999997776654 12 1
Q ss_pred cCCCceeeeeeeEeeccccCCCCCCc
Q 018329 206 AGKDSFINLKGFMIGNAVINDPTDTK 231 (358)
Q Consensus 206 ~~~~~~inLkGi~igng~~d~~~q~~ 231 (358)
-.++.++.++|.+|+.....
T Consensus 87 ------~~f~a~v~~~g~~d~~~~~~ 106 (213)
T PF00326_consen 87 ------DRFKAAVAGAGVSDLFSYYG 106 (213)
T ss_dssp ------CGSSEEEEESE-SSTTCSBH
T ss_pred ------eeeeeeeccceecchhcccc
Confidence 12789999999999876543
No 69
>PRK10162 acetyl esterase; Provisional
Probab=95.43 E-value=0.048 Score=52.67 Aligned_cols=63 Identities=10% Similarity=0.121 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCC
Q 018329 158 ANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVIND 226 (358)
Q Consensus 158 a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~ 226 (358)
+.+.++++.+.-+.+ .....+++|+|+|.||+.+..++.+..+... ....++++++..|++|.
T Consensus 135 ~~~a~~~l~~~~~~~-~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~-----~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 135 IVAVCCYFHQHAEDY-GINMSRIGFAGDSAGAMLALASALWLRDKQI-----DCGKVAGVLLWYGLYGL 197 (318)
T ss_pred HHHHHHHHHHhHHHh-CCChhHEEEEEECHHHHHHHHHHHHHHhcCC-----CccChhheEEECCccCC
Confidence 344455554433333 1234579999999999999888876654321 12457899999999885
No 70
>PLN00021 chlorophyllase
Probab=95.32 E-value=0.055 Score=52.38 Aligned_cols=116 Identities=15% Similarity=0.122 Sum_probs=64.8
Q ss_pred CCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCcccccccccCCCcccccCcHHH
Q 018329 78 VSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVT 157 (358)
Q Consensus 78 ~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfSy~~~~~~~~~~~~~~~ 157 (358)
..+.|+|+|++|+.+.... +..+.+ .+. +| -..++.+|-+ |++.. .. . .+.+.
T Consensus 49 ~g~~PvVv~lHG~~~~~~~-y~~l~~-----------~La----s~--G~~VvapD~~---g~~~~---~~-~--~~i~d 101 (313)
T PLN00021 49 AGTYPVLLFLHGYLLYNSF-YSQLLQ-----------HIA----SH--GFIVVAPQLY---TLAGP---DG-T--DEIKD 101 (313)
T ss_pred CCCCCEEEEECCCCCCccc-HHHHHH-----------HHH----hC--CCEEEEecCC---CcCCC---Cc-h--hhHHH
Confidence 3567999999998776654 333321 010 11 1345556644 22211 11 1 22334
Q ss_pred HHHHHHHHHHHHHH-CC---CCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCC
Q 018329 158 ANDSYAFLIGWFKR-FP---NFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVIND 226 (358)
Q Consensus 158 a~~~~~fl~~f~~~-fp---~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~ 226 (358)
+.++..++.+-++. .| +....+++|+|+|.||..+-.+|.+..+.. ....+++++..+++...
T Consensus 102 ~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~------~~~~v~ali~ldPv~g~ 168 (313)
T PLN00021 102 AAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVS------LPLKFSALIGLDPVDGT 168 (313)
T ss_pred HHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccc------cccceeeEEeecccccc
Confidence 55666666654332 12 233457999999999998777775443211 12458899988887544
No 71
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=95.23 E-value=0.17 Score=48.80 Aligned_cols=137 Identities=18% Similarity=0.195 Sum_probs=90.5
Q ss_pred ceEEEEEEEecCCCCceEEEEEEeccCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccce
Q 018329 50 FKHYAGYVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANM 129 (358)
Q Consensus 50 ~~~ysGyl~v~~~~~~~lfywf~~s~~~~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~ 129 (358)
.....+|++++ + +++++.+. .++..|+||.|+|=|=.+=. +-.-. ..+.. +-..+
T Consensus 20 ~~~~hk~~~~~---g--I~~h~~e~--g~~~gP~illlHGfPe~wys-wr~q~-----------~~la~------~~~rv 74 (322)
T KOG4178|consen 20 SAISHKFVTYK---G--IRLHYVEG--GPGDGPIVLLLHGFPESWYS-WRHQI-----------PGLAS------RGYRV 74 (322)
T ss_pred hhcceeeEEEc---c--EEEEEEee--cCCCCCEEEEEccCCccchh-hhhhh-----------hhhhh------cceEE
Confidence 35567788875 2 77887777 78889999999998877654 21100 01110 11468
Q ss_pred eEeecCcccccccccCC-CcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCC
Q 018329 130 LFLEAPVGVGFSYTNNS-EDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGK 208 (358)
Q Consensus 130 l~iDqP~G~GfSy~~~~-~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~ 208 (358)
+.+|.+ |.|+|-.... ..| +....+.|+..+|.. +...++++.|++||+..+=.+|..--++-+.
T Consensus 75 iA~Dlr-GyG~Sd~P~~~~~Y---t~~~l~~di~~lld~-------Lg~~k~~lvgHDwGaivaw~la~~~Perv~~--- 140 (322)
T KOG4178|consen 75 IAPDLR-GYGFSDAPPHISEY---TIDELVGDIVALLDH-------LGLKKAFLVGHDWGAIVAWRLALFYPERVDG--- 140 (322)
T ss_pred EecCCC-CCCCCCCCCCccee---eHHHHHHHHHHHHHH-------hccceeEEEeccchhHHHHHHHHhChhhcce---
Confidence 899977 9999965444 233 567778888877764 2245799999999999888888766654322
Q ss_pred CceeeeeeeEeeccccCCCC
Q 018329 209 DSFINLKGFMIGNAVINDPT 228 (358)
Q Consensus 209 ~~~inLkGi~igng~~d~~~ 228 (358)
.+++++.-. ||..+|..
T Consensus 141 --lv~~nv~~~-~p~~~~~~ 157 (322)
T KOG4178|consen 141 --LVTLNVPFP-NPKLKPLD 157 (322)
T ss_pred --EEEecCCCC-Ccccchhh
Confidence 244444444 66666654
No 72
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=94.72 E-value=0.077 Score=57.37 Aligned_cols=137 Identities=20% Similarity=0.143 Sum_probs=80.3
Q ss_pred CceEEEEEEeccC-C-CCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCccc-ccceeEeecCccccc
Q 018329 64 HKALFYWFFEAQK-G-VSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNK-AANMLFLEAPVGVGF 140 (358)
Q Consensus 64 ~~~lfywf~~s~~-~-~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~-~an~l~iDqP~G~Gf 140 (358)
+-.+++++....+ + .++-||+++..|||++-+.. +. + .+..|.+.+.. -.-++.|| +.|+|+
T Consensus 507 ~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~-~~------~-------~~~~~~~~~s~~g~~v~~vd-~RGs~~ 571 (755)
T KOG2100|consen 507 GITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVT-SK------F-------SVDWNEVVVSSRGFAVLQVD-GRGSGG 571 (755)
T ss_pred cEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceee-ee------E-------EecHHHHhhccCCeEEEEEc-CCCcCC
Confidence 4566677666643 2 34569999999999933331 11 1 22223443333 34578889 778886
Q ss_pred ccccC-CCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEe
Q 018329 141 SYTNN-SEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMI 219 (358)
Q Consensus 141 Sy~~~-~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~i 219 (358)
.-..- ..-+...++. ..+|.....+.+.+.+ ..-..++.|+|-||||- ++..++..... --+|--+-
T Consensus 572 ~G~~~~~~~~~~lG~~-ev~D~~~~~~~~~~~~-~iD~~ri~i~GwSyGGy----~t~~~l~~~~~------~~fkcgva 639 (755)
T KOG2100|consen 572 YGWDFRSALPRNLGDV-EVKDQIEAVKKVLKLP-FIDRSRVAIWGWSYGGY----LTLKLLESDPG------DVFKCGVA 639 (755)
T ss_pred cchhHHHHhhhhcCCc-chHHHHHHHHHHHhcc-cccHHHeEEeccChHHH----HHHHHhhhCcC------ceEEEEEE
Confidence 53210 0111111222 2466677777766665 44455799999999996 44455554321 22666688
Q ss_pred eccccCCC
Q 018329 220 GNAVINDP 227 (358)
Q Consensus 220 gng~~d~~ 227 (358)
.+|++|-.
T Consensus 640 vaPVtd~~ 647 (755)
T KOG2100|consen 640 VAPVTDWL 647 (755)
T ss_pred ecceeeee
Confidence 89999876
No 73
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=94.67 E-value=0.38 Score=45.91 Aligned_cols=125 Identities=16% Similarity=0.206 Sum_probs=71.9
Q ss_pred CceEEEEEEeccCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccc-----eeEeec----
Q 018329 64 HKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAAN-----MLFLEA---- 134 (358)
Q Consensus 64 ~~~lfywf~~s~~~~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an-----~l~iDq---- 134 (358)
+...-||++....-++..||||-|+|+=|...- +- +-..|++.|. |+|-|+
T Consensus 44 g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag-~~-------------------~~sg~d~lAd~~gFlV~yPdg~~~~ 103 (312)
T COG3509 44 GLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAG-QL-------------------HGTGWDALADREGFLVAYPDGYDRA 103 (312)
T ss_pred CCccceEEEcCCCCCCCCCEEEEEecCCCChHH-hh-------------------cccchhhhhcccCcEEECcCccccc
Confidence 566779999887777788999999998766544 21 1123444333 223220
Q ss_pred --CcccccccccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCcee
Q 018329 135 --PVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFI 212 (358)
Q Consensus 135 --P~G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~i 212 (358)
|-+.|-++..... . .+...+..+.+.+.....+| ......+||+|-|-||..+-.|+..- ++ |
T Consensus 104 wn~~~~~~~~~p~~~--~--~g~ddVgflr~lva~l~~~~-gidp~RVyvtGlS~GG~Ma~~lac~~---p~-------~ 168 (312)
T COG3509 104 WNANGCGNWFGPADR--R--RGVDDVGFLRALVAKLVNEY-GIDPARVYVTGLSNGGRMANRLACEY---PD-------I 168 (312)
T ss_pred cCCCcccccCCcccc--c--CCccHHHHHHHHHHHHHHhc-CcCcceEEEEeeCcHHHHHHHHHhcC---cc-------c
Confidence 3344444432211 1 12222344555555544555 34456799999999998766665421 11 1
Q ss_pred eeeeeEeecccc
Q 018329 213 NLKGFMIGNAVI 224 (358)
Q Consensus 213 nLkGi~igng~~ 224 (358)
+.+|++..|..
T Consensus 169 -faa~A~VAg~~ 179 (312)
T COG3509 169 -FAAIAPVAGLL 179 (312)
T ss_pred -ccceeeeeccc
Confidence 66777777766
No 74
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=94.63 E-value=0.16 Score=45.70 Aligned_cols=102 Identities=17% Similarity=0.217 Sum_probs=67.1
Q ss_pred eEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCccc-ccceeEeecCcccccccccCCCcccccCcHHHHHHH
Q 018329 83 LVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNK-AANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDS 161 (358)
Q Consensus 83 l~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~-~an~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a~~~ 161 (358)
-|+++.+|=|.++. |--|.. . ..+ ..+|..|+.| |-+ ....... +-++.|+..
T Consensus 2 ~lf~~p~~gG~~~~-y~~la~-----------~-------l~~~~~~v~~i~~~-~~~-----~~~~~~~-si~~la~~y 55 (229)
T PF00975_consen 2 PLFCFPPAGGSASS-YRPLAR-----------A-------LPDDVIGVYGIEYP-GRG-----DDEPPPD-SIEELASRY 55 (229)
T ss_dssp EEEEESSTTCSGGG-GHHHHH-----------H-------HTTTEEEEEEECST-TSC-----TTSHEES-SHHHHHHHH
T ss_pred eEEEEcCCccCHHH-HHHHHH-----------h-------CCCCeEEEEEEecC-CCC-----CCCCCCC-CHHHHHHHH
Confidence 47888888776665 433321 0 111 3567788855 443 1111222 677788887
Q ss_pred HHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeecccc
Q 018329 162 YAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVI 224 (358)
Q Consensus 162 ~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~ 224 (358)
.+.|+ +..| ..|++|+|.|+||..+=.+|.++.++. ...+.+++.++..
T Consensus 56 ~~~I~---~~~~---~gp~~L~G~S~Gg~lA~E~A~~Le~~G--------~~v~~l~liD~~~ 104 (229)
T PF00975_consen 56 AEAIR---ARQP---EGPYVLAGWSFGGILAFEMARQLEEAG--------EEVSRLILIDSPP 104 (229)
T ss_dssp HHHHH---HHTS---SSSEEEEEETHHHHHHHHHHHHHHHTT---------SESEEEEESCSS
T ss_pred HHHhh---hhCC---CCCeeehccCccHHHHHHHHHHHHHhh--------hccCceEEecCCC
Confidence 77776 3555 339999999999999999998887763 3478889888653
No 75
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=94.44 E-value=0.018 Score=57.43 Aligned_cols=82 Identities=23% Similarity=0.242 Sum_probs=53.2
Q ss_pred ccceeEeecCcccccccccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhc
Q 018329 126 AANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIR 205 (358)
Q Consensus 126 ~an~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~ 205 (358)
=-+||-||-| |||+|.... .. +..+.++..+..|+..-|+.....+.++|-|+||.|++.+|.. +.
T Consensus 218 GiA~LtvDmP-G~G~s~~~~---l~-----~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~l--e~--- 283 (411)
T PF06500_consen 218 GIAMLTVDMP-GQGESPKWP---LT-----QDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAAL--ED--- 283 (411)
T ss_dssp T-EEEEE--T-TSGGGTTT----S------S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHH--TT---
T ss_pred CCEEEEEccC-CCcccccCC---CC-----cCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHh--cc---
Confidence 3479999988 999984321 11 1123466666777788999988899999999999999999852 11
Q ss_pred cCCCceeeeeeeEeeccccCCC
Q 018329 206 AGKDSFINLKGFMIGNAVINDP 227 (358)
Q Consensus 206 ~~~~~~inLkGi~igng~~d~~ 227 (358)
-.||+++.-.|.++..
T Consensus 284 ------~RlkavV~~Ga~vh~~ 299 (411)
T PF06500_consen 284 ------PRLKAVVALGAPVHHF 299 (411)
T ss_dssp ------TT-SEEEEES---SCG
T ss_pred ------cceeeEeeeCchHhhh
Confidence 1288988777766543
No 76
>COG4099 Predicted peptidase [General function prediction only]
Probab=94.20 E-value=0.71 Score=44.18 Aligned_cols=39 Identities=21% Similarity=0.214 Sum_probs=27.7
Q ss_pred HHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHH
Q 018329 162 YAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIH 200 (358)
Q Consensus 162 ~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~ 200 (358)
.+.+.+=+..++....+++|++|-|-||.-.=+++.+..
T Consensus 253 idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfP 291 (387)
T COG4099 253 IDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFP 291 (387)
T ss_pred HHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCc
Confidence 344444445677787889999999999987666655443
No 77
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=93.76 E-value=0.6 Score=42.80 Aligned_cols=123 Identities=18% Similarity=0.292 Sum_probs=77.6
Q ss_pred CceEEEEEEeccCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCcccccccc
Q 018329 64 HKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYT 143 (358)
Q Consensus 64 ~~~lfywf~~s~~~~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfSy~ 143 (358)
.-.|.=|...+++ .+|.+|.++|--|-- |.+. ...+. .=-+-..||+-+|-. |.|-|.+
T Consensus 64 ~vtL~a~~~~~E~---S~pTlLyfh~NAGNm----Ghr~------~i~~~-------fy~~l~mnv~ivsYR-GYG~S~G 122 (300)
T KOG4391|consen 64 KVTLDAYLMLSES---SRPTLLYFHANAGNM----GHRL------PIARV-------FYVNLKMNVLIVSYR-GYGKSEG 122 (300)
T ss_pred ceeEeeeeecccC---CCceEEEEccCCCcc----cchh------hHHHH-------HHHHcCceEEEEEee-ccccCCC
Confidence 4456644444433 789999999864432 2221 01000 001224688999954 9999977
Q ss_pred cCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccc
Q 018329 144 NNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAV 223 (358)
Q Consensus 144 ~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~ 223 (358)
..... +....|+...+. +-..|...+.++++.|.|-||.-+-.+|.+-.. .+.++++-|-+
T Consensus 123 spsE~----GL~lDs~avldy----l~t~~~~dktkivlfGrSlGGAvai~lask~~~-----------ri~~~ivENTF 183 (300)
T KOG4391|consen 123 SPSEE----GLKLDSEAVLDY----LMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSD-----------RISAIIVENTF 183 (300)
T ss_pred Ccccc----ceeccHHHHHHH----HhcCccCCcceEEEEecccCCeeEEEeeccchh-----------heeeeeeechh
Confidence 54332 222223333333 356889999999999999999988877764433 38899999988
Q ss_pred cCC
Q 018329 224 IND 226 (358)
Q Consensus 224 ~d~ 226 (358)
++-
T Consensus 184 ~SI 186 (300)
T KOG4391|consen 184 LSI 186 (300)
T ss_pred ccc
Confidence 775
No 78
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=93.51 E-value=0.11 Score=42.84 Aligned_cols=94 Identities=22% Similarity=0.298 Sum_probs=56.6
Q ss_pred eEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCcccccccccCCCcccccCcHHHHHHHH
Q 018329 83 LVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSY 162 (358)
Q Consensus 83 l~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a~~~~ 162 (358)
+||+++|+.|.... +..+.+ .+... -.+++.+|.| +.|-+. ....+++++
T Consensus 1 ~vv~~HG~~~~~~~-~~~~~~-----------~l~~~------G~~v~~~~~~-~~~~~~-----------~~~~~~~~~ 50 (145)
T PF12695_consen 1 VVVLLHGWGGSRRD-YQPLAE-----------ALAEQ------GYAVVAFDYP-GHGDSD-----------GADAVERVL 50 (145)
T ss_dssp EEEEECTTTTTTHH-HHHHHH-----------HHHHT------TEEEEEESCT-TSTTSH-----------HSHHHHHHH
T ss_pred CEEEECCCCCCHHH-HHHHHH-----------HHHHC------CCEEEEEecC-CCCccc-----------hhHHHHHHH
Confidence 58999999776655 444443 11111 2467777765 444331 111334444
Q ss_pred HHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccc
Q 018329 163 AFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAV 223 (358)
Q Consensus 163 ~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~ 223 (358)
+.+. +.++ ..++++|+|+|.||..+..++. .+ -.+++++..+|+
T Consensus 51 ~~~~---~~~~--~~~~i~l~G~S~Gg~~a~~~~~----~~--------~~v~~~v~~~~~ 94 (145)
T PF12695_consen 51 ADIR---AGYP--DPDRIILIGHSMGGAIAANLAA----RN--------PRVKAVVLLSPY 94 (145)
T ss_dssp HHHH---HHHC--TCCEEEEEEETHHHHHHHHHHH----HS--------TTESEEEEESES
T ss_pred HHHH---hhcC--CCCcEEEEEEccCcHHHHHHhh----hc--------cceeEEEEecCc
Confidence 4433 3333 4568999999999997777765 21 228899999985
No 79
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=93.24 E-value=0.26 Score=45.26 Aligned_cols=50 Identities=18% Similarity=0.202 Sum_probs=33.4
Q ss_pred HHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeecccc
Q 018329 164 FLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVI 224 (358)
Q Consensus 164 fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~ 224 (358)
.|.+.+........+++|++|.|=||.....|+..--+ -+.++++..|..
T Consensus 83 ~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd-----------~faa~a~~sG~~ 132 (220)
T PF10503_consen 83 ALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPD-----------LFAAVAVVSGVP 132 (220)
T ss_pred HHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCc-----------cceEEEeecccc
Confidence 33333334445667789999999999877666653222 177888888874
No 80
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=92.83 E-value=0.77 Score=45.82 Aligned_cols=122 Identities=22% Similarity=0.281 Sum_probs=75.3
Q ss_pred eEEEEEEeccC----CCCCCCeEEEECCCCChhhhh-----hhhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCc
Q 018329 66 ALFYWFFEAQK----GVSSKPLVLWLNGGPGCSSIA-----YGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPV 136 (358)
Q Consensus 66 ~lfywf~~s~~----~~~~~pl~lwlnGGPG~Ss~~-----~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~ 136 (358)
-..=|+..... +..++|+||.+.|=.|.|.-. ....++.| |++ ++-| +-
T Consensus 106 ~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G-~r~------VVfN---------------~R 163 (409)
T KOG1838|consen 106 VTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKG-YRV------VVFN---------------HR 163 (409)
T ss_pred EEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCC-cEE------EEEC---------------CC
Confidence 34446554432 246789999999988888531 13345556 332 1111 56
Q ss_pred ccccccccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeee
Q 018329 137 GVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKG 216 (358)
Q Consensus 137 G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkG 216 (358)
|-|-|--++..-|.- +.. +|+-++++.--++|| ..++|.+|.|+||.. +.+++-|..++ . -=..|
T Consensus 164 G~~g~~LtTpr~f~a-g~t---~Dl~~~v~~i~~~~P---~a~l~avG~S~Gg~i---L~nYLGE~g~~----~-~l~~a 228 (409)
T KOG1838|consen 164 GLGGSKLTTPRLFTA-GWT---EDLREVVNHIKKRYP---QAPLFAVGFSMGGNI---LTNYLGEEGDN----T-PLIAA 228 (409)
T ss_pred CCCCCccCCCceeec-CCH---HHHHHHHHHHHHhCC---CCceEEEEecchHHH---HHHHhhhccCC----C-CceeE
Confidence 877776555544432 443 455555555447899 669999999999986 45555544221 2 23789
Q ss_pred eEeecccc
Q 018329 217 FMIGNAVI 224 (358)
Q Consensus 217 i~igng~~ 224 (358)
++|-|||=
T Consensus 229 ~~v~~Pwd 236 (409)
T KOG1838|consen 229 VAVCNPWD 236 (409)
T ss_pred EEEeccch
Confidence 99999994
No 81
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=92.74 E-value=0.58 Score=45.52 Aligned_cols=95 Identities=24% Similarity=0.288 Sum_probs=57.1
Q ss_pred CCCCeEEEECC-CCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCcccccccccCCCcccccCcHHH
Q 018329 79 SSKPLVLWLNG-GPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVT 157 (358)
Q Consensus 79 ~~~pl~lwlnG-GPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfSy~~~~~~~~~~~~~~~ 157 (358)
.++|-||.++| |-++.+-+ + ...+.++..-.-++-||=| |-|+|-..+. +..=+
T Consensus 56 ~~~~pvlllHGF~~~~~~w~-----~-------------~~~~L~~~~~~~v~aiDl~-G~g~~s~~~~------~~~y~ 110 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSFSWR-----R-------------VVPLLSKAKGLRVLAIDLP-GHGYSSPLPR------GPLYT 110 (326)
T ss_pred CCCCcEEEeccccCCcccHh-----h-------------hccccccccceEEEEEecC-CCCcCCCCCC------CCcee
Confidence 46788999997 43333322 1 0122233333457889966 7674322111 12233
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHH
Q 018329 158 ANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHE 201 (358)
Q Consensus 158 a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~ 201 (358)
+++....++.|+..+ ...+++|.|+||||..+=.+|....+
T Consensus 111 ~~~~v~~i~~~~~~~---~~~~~~lvghS~Gg~va~~~Aa~~P~ 151 (326)
T KOG1454|consen 111 LRELVELIRRFVKEV---FVEPVSLVGHSLGGIVALKAAAYYPE 151 (326)
T ss_pred hhHHHHHHHHHHHhh---cCcceEEEEeCcHHHHHHHHHHhCcc
Confidence 566666666666643 35679999999999988888876544
No 82
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=92.55 E-value=0.51 Score=44.49 Aligned_cols=119 Identities=17% Similarity=0.199 Sum_probs=74.5
Q ss_pred CCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCcccccccccCCC----cccccCcHH
Q 018329 81 KPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSE----DLHKLGDQV 156 (358)
Q Consensus 81 ~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfSy~~~~~----~~~~~~~~~ 156 (358)
+++++|+-|-||.-.- |--|.+ .|..+- +....|+=+. =.|||...... +....+-++
T Consensus 2 ~~li~~IPGNPGlv~f-Y~~Fl~-----------~L~~~l---~~~~~i~~is---h~Gh~~~~~~~~~~~~~~~~sL~~ 63 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEF-YEEFLS-----------ALYEKL---NPQFEILGIS---HAGHSTSPSNSKFSPNGRLFSLQD 63 (266)
T ss_pred cEEEEEECCCCChHHH-HHHHHH-----------HHHHhC---CCCCeeEEec---CCCCcCCcccccccCCCCccCHHH
Confidence 5799999999999998 666543 222211 3334444444 24555543321 111237788
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCC
Q 018329 157 TANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVIND 226 (358)
Q Consensus 157 ~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~ 226 (358)
+.+.-.+||+++....+ ..+.+++|.|||=|+. ++.+|+++... ...++++++..=|.+..
T Consensus 64 QI~hk~~~i~~~~~~~~-~~~~~liLiGHSIGay----i~levl~r~~~----~~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 64 QIEHKIDFIKELIPQKN-KPNVKLILIGHSIGAY----IALEVLKRLPD----LKFRVKKVILLFPTIED 124 (266)
T ss_pred HHHHHHHHHHHHhhhhc-CCCCcEEEEeCcHHHH----HHHHHHHhccc----cCCceeEEEEeCCcccc
Confidence 89999999999887654 2356899999998765 56666665431 23556666666665543
No 83
>PRK11460 putative hydrolase; Provisional
Probab=92.47 E-value=0.6 Score=42.86 Aligned_cols=53 Identities=6% Similarity=-0.088 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeecccc
Q 018329 160 DSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVI 224 (358)
Q Consensus 160 ~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~ 224 (358)
++.++++.+.++. ....++++|.|.|.||..+-.++.+ ... .+.+++..+|.+
T Consensus 86 ~l~~~i~~~~~~~-~~~~~~i~l~GfS~Gg~~al~~a~~----~~~-------~~~~vv~~sg~~ 138 (232)
T PRK11460 86 TFIETVRYWQQQS-GVGASATALIGFSQGAIMALEAVKA----EPG-------LAGRVIAFSGRY 138 (232)
T ss_pred HHHHHHHHHHHhc-CCChhhEEEEEECHHHHHHHHHHHh----CCC-------cceEEEEecccc
Confidence 3444444443332 3445679999999999987665542 111 145566666654
No 84
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=92.14 E-value=0.55 Score=47.90 Aligned_cols=39 Identities=21% Similarity=0.158 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHH
Q 018329 157 TANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLA 196 (358)
Q Consensus 157 ~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la 196 (358)
.....++++++-.+.|. -..+++.|+|+|.||+-+-.++
T Consensus 156 D~~~al~wv~~~i~~fg-gd~~~v~~~G~SaG~~~~~~~~ 194 (493)
T cd00312 156 DQRLALKWVQDNIAAFG-GDPDSVTIFGESAGGASVSLLL 194 (493)
T ss_pred HHHHHHHHHHHHHHHhC-CCcceEEEEeecHHHHHhhhHh
Confidence 34556677777666664 3456799999999998654443
No 85
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=91.64 E-value=1.5 Score=42.70 Aligned_cols=135 Identities=12% Similarity=0.036 Sum_probs=68.8
Q ss_pred CceEEEEEEeccCCCCCCCeEEEECCCCChhhhhhhhhhhc-CCeEEcCCCCeee-cCCCCcccccceeEeecCcc--cc
Q 018329 64 HKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQEL-GPFLVGGNGSRLK-FNKYSWNKAANMLFLEAPVG--VG 139 (358)
Q Consensus 64 ~~~lfywf~~s~~~~~~~pl~lwlnGGPG~Ss~~~g~~~e~-GP~~~~~~~~~l~-~n~~sW~~~an~l~iDqP~G--~G 139 (358)
+.+++|.-+... +...+|.||.++|=.|.+-.. . ..+. .|=.+. .+. ....--.+...|+-+|.| | .|
T Consensus 15 ~~~~~y~~~g~~-~~~~~~~vll~Hg~~~~~~~~-~-~~~~~~~~~w~----~~~~~~~~l~~~~~~vi~~D~~-G~~~g 86 (351)
T TIGR01392 15 DVRVAYETYGTL-NAERSNAVLVCHALTGDAHVA-G-YHDDGDPGWWD----DLIGPGRAIDTDRYFVVCSNVL-GGCYG 86 (351)
T ss_pred CceEEEEecccc-CCCCCCEEEEcCCcCcchhhc-c-cCCCCCCCchh----hccCCCCCcCCCceEEEEecCC-CCCCC
Confidence 567888755331 123458899999877755331 0 0000 000000 000 000001234589999987 5 44
Q ss_pred cccccC----CCcc----cccCcHHHHHHHHHHHHHHHHHCCCCCCCC-eEEeccccCCccHHHHHHHHHHHhhccCCCc
Q 018329 140 FSYTNN----SEDL----HKLGDQVTANDSYAFLIGWFKRFPNFKSHD-FYIAGESYAGHYVPQLAELIHERNIRAGKDS 210 (358)
Q Consensus 140 fSy~~~----~~~~----~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~-~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~ 210 (358)
-|-..+ ...+ ...+.+..++++.++++. . .-.+ ++|+|+|.||..+-.+|.+--+
T Consensus 87 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l---~~~~~~~l~G~S~Gg~ia~~~a~~~p~--------- 150 (351)
T TIGR01392 87 STGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDH----L---GIEQIAAVVGGSMGGMQALEWAIDYPE--------- 150 (351)
T ss_pred CCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHH----c---CCCCceEEEEECHHHHHHHHHHHHChH---------
Confidence 332100 0001 011344555566555543 2 2235 9999999999887777754322
Q ss_pred eeeeeeeEeecccc
Q 018329 211 FINLKGFMIGNAVI 224 (358)
Q Consensus 211 ~inLkGi~igng~~ 224 (358)
.++++++.++..
T Consensus 151 --~v~~lvl~~~~~ 162 (351)
T TIGR01392 151 --RVRAIVVLATSA 162 (351)
T ss_pred --hhheEEEEccCC
Confidence 277888888654
No 86
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=91.60 E-value=2.2 Score=40.75 Aligned_cols=52 Identities=17% Similarity=0.224 Sum_probs=40.0
Q ss_pred CCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCCCCCCcchhh
Q 018329 177 SHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVD 235 (358)
Q Consensus 177 ~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~~~q~~~~~~ 235 (358)
.+++.|+|+|=||+-+..++...-+.. ...+++.++..|++|......++..
T Consensus 151 p~~i~v~GdSAGG~La~~~a~~~~~~~-------~~~p~~~~li~P~~d~~~~~~~~~~ 202 (312)
T COG0657 151 PSRIAVAGDSAGGHLALALALAARDRG-------LPLPAAQVLISPLLDLTSSAASLPG 202 (312)
T ss_pred ccceEEEecCcccHHHHHHHHHHHhcC-------CCCceEEEEEecccCCcccccchhh
Confidence 567999999999999999998776641 2447899999999998763333333
No 87
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.24 E-value=0.93 Score=42.35 Aligned_cols=105 Identities=19% Similarity=0.351 Sum_probs=56.8
Q ss_pred CCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCcccccccccCCCcccccCcHHHH
Q 018329 79 SSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTA 158 (358)
Q Consensus 79 ~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a 158 (358)
+++|+++|+-|-||-++. |--|.-. ...+- ..+.| -|+ +.++=..+.|+-+==+-+....+. .+.+++.
T Consensus 27 ~~~~li~~IpGNPG~~gF-Y~~F~~~--L~~~l----~~r~~-~wt-Ish~~H~~~P~sl~~~~s~~~~ei--fsL~~QV 95 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGF-YTEFARH--LHLNL----IDRLP-VWT-ISHAGHALMPASLREDHSHTNEEI--FSLQDQV 95 (301)
T ss_pred CCceEEEEecCCCCchhH-HHHHHHH--HHHhc----ccccc-eeE-EeccccccCCcccccccccccccc--cchhhHH
Confidence 678999999999999887 5444210 00000 00011 121 222223344421111111111111 2567778
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHh
Q 018329 159 NDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERN 203 (358)
Q Consensus 159 ~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~ 203 (358)
+.=++|++++.- +++++||.|+|=|. ++..+|+..+
T Consensus 96 ~HKlaFik~~~P-----k~~ki~iiGHSiGa----Ym~Lqil~~~ 131 (301)
T KOG3975|consen 96 DHKLAFIKEYVP-----KDRKIYIIGHSIGA----YMVLQILPSI 131 (301)
T ss_pred HHHHHHHHHhCC-----CCCEEEEEecchhH----HHHHHHhhhc
Confidence 888899987653 46789999999864 4556666643
No 88
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=89.85 E-value=0.3 Score=44.09 Aligned_cols=74 Identities=11% Similarity=-0.014 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCCCCCCc----
Q 018329 156 VTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTK---- 231 (358)
Q Consensus 156 ~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~~~q~~---- 231 (358)
+.++.+.+++....+.. ...++++|.|-|-||...-.++.+- .-.|.|++..+|++-+..+..
T Consensus 85 ~s~~~l~~li~~~~~~~--i~~~ri~l~GFSQGa~~al~~~l~~-----------p~~~~gvv~lsG~~~~~~~~~~~~~ 151 (216)
T PF02230_consen 85 ESAERLDELIDEEVAYG--IDPSRIFLGGFSQGAAMALYLALRY-----------PEPLAGVVALSGYLPPESELEDRPE 151 (216)
T ss_dssp HHHHHHHHHHHHHHHTT----GGGEEEEEETHHHHHHHHHHHCT-----------SSTSSEEEEES---TTGCCCHCCHC
T ss_pred HHHHHHHHHHHHHHHcC--CChhheehhhhhhHHHHHHHHHHHc-----------CcCcCEEEEeecccccccccccccc
Confidence 34455556666554432 5567899999999998766665421 124889999999986543321
Q ss_pred --chhhhhhhccc
Q 018329 232 --GLVDYAWSHAI 242 (358)
Q Consensus 232 --~~~~~~~~~gl 242 (358)
.-.+.+.-||.
T Consensus 152 ~~~~~pi~~~hG~ 164 (216)
T PF02230_consen 152 ALAKTPILIIHGD 164 (216)
T ss_dssp CCCTS-EEEEEET
T ss_pred ccCCCcEEEEecC
Confidence 12355566763
No 89
>PLN02872 triacylglycerol lipase
Probab=89.43 E-value=2.4 Score=42.42 Aligned_cols=96 Identities=16% Similarity=0.138 Sum_probs=55.4
Q ss_pred CCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCccc-ccceeEeecCcccccccccCC-----Cccccc
Q 018329 79 SSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNK-AANMLFLEAPVGVGFSYTNNS-----EDLHKL 152 (358)
Q Consensus 79 ~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~-~an~l~iDqP~G~GfSy~~~~-----~~~~~~ 152 (358)
..+|.|+.++|..++|.. |..- +|-. .+ .+-..+ =..|+-.|.+ |.|+|++... ..+...
T Consensus 72 ~~~~~Vll~HGl~~ss~~-w~~~---~~~~------sl---a~~La~~GydV~l~n~R-G~~~s~gh~~~~~~~~~fw~~ 137 (395)
T PLN02872 72 QRGPPVLLQHGLFMAGDA-WFLN---SPEQ------SL---GFILADHGFDVWVGNVR-GTRWSYGHVTLSEKDKEFWDW 137 (395)
T ss_pred CCCCeEEEeCcccccccc-eeec---Cccc------ch---HHHHHhCCCCccccccc-ccccccCCCCCCccchhccCC
Confidence 457899999998887776 4321 1100 00 000111 1255666654 8888764221 112122
Q ss_pred CcHHHH-HHHHHHHHHHHHHCCCCCCCCeEEeccccCCccH
Q 018329 153 GDQVTA-NDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYV 192 (358)
Q Consensus 153 ~~~~~a-~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yv 192 (358)
+-++.| .|+-++++...+.- ..+++++|+|.||...
T Consensus 138 s~~e~a~~Dl~a~id~i~~~~----~~~v~~VGhS~Gg~~~ 174 (395)
T PLN02872 138 SWQELALYDLAEMIHYVYSIT----NSKIFIVGHSQGTIMS 174 (395)
T ss_pred cHHHHHHHHHHHHHHHHHhcc----CCceEEEEECHHHHHH
Confidence 445566 68888887765432 3589999999999654
No 90
>COG0400 Predicted esterase [General function prediction only]
Probab=89.32 E-value=2.2 Score=38.74 Aligned_cols=78 Identities=12% Similarity=0.074 Sum_probs=52.6
Q ss_pred CcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCCCCC---
Q 018329 153 GDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTD--- 229 (358)
Q Consensus 153 ~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~~~q--- 229 (358)
+....+..+.+||....+.+. ...+++++.|-|-|+.++..+..+-. -.++|+++-.|..-+..+
T Consensus 75 dl~~~~~~~~~~l~~~~~~~g-i~~~~ii~~GfSqGA~ial~~~l~~~-----------~~~~~ail~~g~~~~~~~~~~ 142 (207)
T COG0400 75 DLDLETEKLAEFLEELAEEYG-IDSSRIILIGFSQGANIALSLGLTLP-----------GLFAGAILFSGMLPLEPELLP 142 (207)
T ss_pred hHHHHHHHHHHHHHHHHHHhC-CChhheEEEecChHHHHHHHHHHhCc-----------hhhccchhcCCcCCCCCcccc
Confidence 455667778889988887764 44568999999999998666543221 238888888888765532
Q ss_pred Ccchhhhhhhccc
Q 018329 230 TKGLVDYAWSHAI 242 (358)
Q Consensus 230 ~~~~~~~~~~~gl 242 (358)
.....+.+..||-
T Consensus 143 ~~~~~pill~hG~ 155 (207)
T COG0400 143 DLAGTPILLSHGT 155 (207)
T ss_pred ccCCCeEEEeccC
Confidence 2334455555663
No 91
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=88.74 E-value=0.79 Score=40.69 Aligned_cols=62 Identities=19% Similarity=0.231 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHHH---CCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCC
Q 018329 157 TANDSYAFLIGWFKR---FPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVIND 226 (358)
Q Consensus 157 ~a~~~~~fl~~f~~~---fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~ 226 (358)
..+|+.++++-..+. + .+...+++|+|+|=||+.+-.++..+.+... ..+++++...|++|.
T Consensus 48 ~~~D~~~a~~~l~~~~~~~-~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~-------~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 48 ALEDVKAAYRWLLKNADKL-GIDPERIVLIGDSAGGHLALSLALRARDRGL-------PKPKGIILISPWTDL 112 (211)
T ss_dssp HHHHHHHHHHHHHHTHHHH-TEEEEEEEEEEETHHHHHHHHHHHHHHHTTT-------CHESEEEEESCHSST
T ss_pred cccccccceeeeccccccc-cccccceEEeecccccchhhhhhhhhhhhcc-------cchhhhhcccccccc
Confidence 344555444433332 1 2445689999999999999999977776431 239999999999887
No 92
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=87.83 E-value=1 Score=49.02 Aligned_cols=85 Identities=15% Similarity=0.237 Sum_probs=53.1
Q ss_pred ccccceeEeecCcccccccccCCCcccccCcHHHHHHHHHHHHHHHHHCC--------------CCCCCCeEEeccccCC
Q 018329 124 NKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFP--------------NFKSHDFYIAGESYAG 189 (358)
Q Consensus 124 ~~~an~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp--------------~~~~~~~yi~GeSYgG 189 (358)
.+=.+++++| ..|+|-|-+.... ...+..+|..+.++ |+...+ .+.+-++-++|.||+|
T Consensus 277 ~rGYaVV~~D-~RGtg~SeG~~~~-----~~~~E~~D~~~vIe-Wl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G 349 (767)
T PRK05371 277 PRGFAVVYVS-GIGTRGSDGCPTT-----GDYQEIESMKAVID-WLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLG 349 (767)
T ss_pred hCCeEEEEEc-CCCCCCCCCcCcc-----CCHHHHHHHHHHHH-HHhhCCccccccccccccccCCCCCeeEEEEEcHHH
Confidence 3456799999 6699999764221 22334445544443 554321 1335589999999999
Q ss_pred ccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCC
Q 018329 190 HYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVIND 226 (358)
Q Consensus 190 ~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~ 226 (358)
...-.+|.. . .-.||.|+-..|+.|.
T Consensus 350 ~~~~~aAa~----~-------pp~LkAIVp~a~is~~ 375 (767)
T PRK05371 350 TLPNAVATT----G-------VEGLETIIPEAAISSW 375 (767)
T ss_pred HHHHHHHhh----C-------CCcceEEEeeCCCCcH
Confidence 876655431 1 1239999988887663
No 93
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=87.82 E-value=0.58 Score=43.87 Aligned_cols=83 Identities=18% Similarity=0.150 Sum_probs=54.3
Q ss_pred cceeEeecCcccccccccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhcc
Q 018329 127 ANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRA 206 (358)
Q Consensus 127 an~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~ 206 (358)
..+|.+| .-|+|-|.+.-.. .....++|.++.| +|....| +.+-++-++|.||+|...-.+|.. +
T Consensus 58 Y~vV~~D-~RG~g~S~G~~~~-----~~~~e~~D~~d~I-~W~~~Qp-ws~G~VGm~G~SY~G~~q~~~A~~----~--- 122 (272)
T PF02129_consen 58 YAVVVQD-VRGTGGSEGEFDP-----MSPNEAQDGYDTI-EWIAAQP-WSNGKVGMYGISYGGFTQWAAAAR----R--- 122 (272)
T ss_dssp -EEEEEE--TTSTTS-S-B-T-----TSHHHHHHHHHHH-HHHHHCT-TEEEEEEEEEETHHHHHHHHHHTT----T---
T ss_pred CEEEEEC-CcccccCCCcccc-----CChhHHHHHHHHH-HHHHhCC-CCCCeEEeeccCHHHHHHHHHHhc----C---
Confidence 3678888 6699999764322 1445566666655 3666675 444579999999999987777651 1
Q ss_pred CCCceeeeeeeEeeccccCCCC
Q 018329 207 GKDSFINLKGFMIGNAVINDPT 228 (358)
Q Consensus 207 ~~~~~inLkGi~igng~~d~~~ 228 (358)
.-.||.|+..-++.|...
T Consensus 123 ----~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 123 ----PPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp -----TTEEEEEEESE-SBTCC
T ss_pred ----CCCceEEEecccCCcccc
Confidence 233999999999888654
No 94
>PLN02454 triacylglycerol lipase
Probab=87.72 E-value=1.3 Score=44.29 Aligned_cols=68 Identities=15% Similarity=0.197 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCC
Q 018329 155 QVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVIND 226 (358)
Q Consensus 155 ~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~ 226 (358)
..+.+++...+++..+++|..+. .++|+|||-||-.+-..|..|.+.... ...++++.+..|.|-+..
T Consensus 206 ~S~r~qvl~~V~~l~~~Yp~~~~-sI~vTGHSLGGALAtLaA~di~~~g~~---~~~~~V~~~TFGsPRVGN 273 (414)
T PLN02454 206 LSARSQLLAKIKELLERYKDEKL-SIVLTGHSLGASLATLAAFDIVENGVS---GADIPVTAIVFGSPQVGN 273 (414)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCc-eEEEEecCHHHHHHHHHHHHHHHhccc---ccCCceEEEEeCCCcccC
Confidence 45778899999999999987643 599999999999988888888764211 123557778888877654
No 95
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=87.49 E-value=1 Score=44.82 Aligned_cols=63 Identities=22% Similarity=0.233 Sum_probs=47.6
Q ss_pred cHHHHHHHHHHHHHHHHHCCCCCC-CCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCCC
Q 018329 154 DQVTANDSYAFLIGWFKRFPNFKS-HDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDP 227 (358)
Q Consensus 154 ~~~~a~~~~~fl~~f~~~fp~~~~-~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~~ 227 (358)
--++|.|...+|..-.+.||.... .|+.+.|.|||| |+..|+.+|.= -.+.||+=-++|.-|.
T Consensus 159 GIMqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~-yla~l~~k~aP----------~~~~~~iDns~~~~p~ 222 (403)
T PF11144_consen 159 GIMQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGG-YLAHLCAKIAP----------WLFDGVIDNSSYALPP 222 (403)
T ss_pred HHHHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHH-HHHHHHHhhCc----------cceeEEEecCccccch
Confidence 457899999999999999999985 789999999987 56666666632 2356666666666653
No 96
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=87.15 E-value=1 Score=37.22 Aligned_cols=62 Identities=18% Similarity=0.239 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeecccc
Q 018329 156 VTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVI 224 (358)
Q Consensus 156 ~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~ 224 (358)
...+.+.+.|++..+++| +.++.|+|||-||-.+..+|..+.++... ...+++-+..|.|-+
T Consensus 45 ~~~~~~~~~l~~~~~~~~---~~~i~itGHSLGGalA~l~a~~l~~~~~~----~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 45 SLYDQILDALKELVEKYP---DYSIVITGHSLGGALASLAAADLASHGPS----SSSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHHHHCTTT----STTTEEEEEES-S--
T ss_pred HHHHHHHHHHHHHHhccc---CccchhhccchHHHHHHHHHHhhhhcccc----cccceeeeecCCccc
Confidence 445677888888888888 45899999999999999999988775432 134566666666654
No 97
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=86.89 E-value=1.6 Score=39.23 Aligned_cols=64 Identities=11% Similarity=0.132 Sum_probs=52.0
Q ss_pred CcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCC
Q 018329 153 GDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVIND 226 (358)
Q Consensus 153 ~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~ 226 (358)
+-+++|.|+-+.++.+.++. +.+++.|+|-|+|.-.+|.+..++...-.+ .++++++..+-...
T Consensus 46 tP~~~a~Dl~~~i~~y~~~w---~~~~vvLiGYSFGADvlP~~~nrLp~~~r~-------~v~~v~Ll~p~~~~ 109 (192)
T PF06057_consen 46 TPEQTAADLARIIRHYRARW---GRKRVVLIGYSFGADVLPFIYNRLPAALRA-------RVAQVVLLSPSTTA 109 (192)
T ss_pred CHHHHHHHHHHHHHHHHHHh---CCceEEEEeecCCchhHHHHHhhCCHHHHh-------heeEEEEeccCCcc
Confidence 67889999999999988764 477899999999999999999999775443 37788877765443
No 98
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=86.28 E-value=1.1 Score=41.32 Aligned_cols=67 Identities=10% Similarity=0.091 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCCC
Q 018329 156 VTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDP 227 (358)
Q Consensus 156 ~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~~ 227 (358)
..+.++.+||+...+.. ..++++|.+||-|+..+-.....+...... .+..-.|..|++.+|-+|..
T Consensus 74 ~s~~~l~~~L~~L~~~~---~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~--~~~~~~~~~viL~ApDid~d 140 (233)
T PF05990_consen 74 FSGPALARFLRDLARAP---GIKRIHILAHSMGNRVLLEALRQLASEGER--PDVKARFDNVILAAPDIDND 140 (233)
T ss_pred HHHHHHHHHHHHHHhcc---CCceEEEEEeCchHHHHHHHHHHHHhcccc--hhhHhhhheEEEECCCCCHH
Confidence 33445555555443332 356899999999999888877777665421 01123688999999888764
No 99
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=86.19 E-value=1.9 Score=36.63 Aligned_cols=44 Identities=18% Similarity=0.223 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHH
Q 018329 156 VTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHER 202 (358)
Q Consensus 156 ~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~ 202 (358)
..++.+...+++...++| ..+++|+|+|-||..+-.+|..+.++
T Consensus 9 ~~~~~i~~~~~~~~~~~p---~~~i~v~GHSlGg~lA~l~a~~~~~~ 52 (153)
T cd00741 9 SLANLVLPLLKSALAQYP---DYKIHVTGHSLGGALAGLAGLDLRGR 52 (153)
T ss_pred HHHHHHHHHHHHHHHHCC---CCeEEEEEcCHHHHHHHHHHHHHHhc
Confidence 345556666666666667 44799999999999999998888664
No 100
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=84.44 E-value=1.4 Score=42.97 Aligned_cols=94 Identities=22% Similarity=0.252 Sum_probs=55.6
Q ss_pred CCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcc-----cccceeEeecCcccccccccCCCccc
Q 018329 76 KGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWN-----KAANMLFLEAPVGVGFSYTNNSEDLH 150 (358)
Q Consensus 76 ~~~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~-----~~an~l~iDqP~G~GfSy~~~~~~~~ 150 (358)
.+++++-.+|+.||- |.+.|+== -+......|. ..+|++...-| |||+|.+..+.
T Consensus 132 ~~a~~~RWiL~s~GN--------g~~~E~~~--------~~~~~~~~~~~~ak~~~aNvl~fNYp-GVg~S~G~~s~--- 191 (365)
T PF05677_consen 132 PEAKPQRWILVSNGN--------GECYENRA--------MLDYKDDWIQRFAKELGANVLVFNYP-GVGSSTGPPSR--- 191 (365)
T ss_pred CCCCCCcEEEEEcCC--------hHHhhhhh--------hhccccHHHHHHHHHcCCcEEEECCC-ccccCCCCCCH---
Confidence 356778899999985 34444200 0001112233 35799999966 99999664321
Q ss_pred ccCcHHHHHHHHHHHHHHHHHCC-CCCCCCeEEeccccCCccHHH
Q 018329 151 KLGDQVTANDSYAFLIGWFKRFP-NFKSHDFYIAGESYAGHYVPQ 194 (358)
Q Consensus 151 ~~~~~~~a~~~~~fl~~f~~~fp-~~~~~~~yi~GeSYgG~yvp~ 194 (358)
. +...+++...++| +.++ --+.+++.+-|+|-||-....
T Consensus 192 ~-dLv~~~~a~v~yL----~d~~~G~ka~~Ii~yG~SLGG~Vqa~ 231 (365)
T PF05677_consen 192 K-DLVKDYQACVRYL----RDEEQGPKAKNIILYGHSLGGGVQAE 231 (365)
T ss_pred H-HHHHHHHHHHHHH----HhcccCCChheEEEeeccccHHHHHH
Confidence 1 3333444444444 3333 235678999999999986554
No 101
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=84.29 E-value=2.2 Score=38.80 Aligned_cols=60 Identities=18% Similarity=0.257 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccC
Q 018329 157 TANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVIN 225 (358)
Q Consensus 157 ~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d 225 (358)
..+++...+++..+++| ..+++++|||-||-.+-.+|..+.++. ...+++.+..|.|-+.
T Consensus 110 ~~~~~~~~~~~~~~~~p---~~~i~vtGHSLGGaiA~l~a~~l~~~~------~~~~i~~~tFg~P~vg 169 (229)
T cd00519 110 LYNQVLPELKSALKQYP---DYKIIVTGHSLGGALASLLALDLRLRG------PGSDVTVYTFGQPRVG 169 (229)
T ss_pred HHHHHHHHHHHHHhhCC---CceEEEEccCHHHHHHHHHHHHHHhhC------CCCceEEEEeCCCCCC
Confidence 34455666666666677 457999999999999888888776542 1245778888887663
No 102
>PRK13604 luxD acyl transferase; Provisional
Probab=83.78 E-value=5.6 Score=38.40 Aligned_cols=124 Identities=10% Similarity=0.105 Sum_probs=69.5
Q ss_pred CCceEEEEEEecc-CCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCcccccc
Q 018329 63 DHKALFYWFFEAQ-KGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFS 141 (358)
Q Consensus 63 ~~~~lfywf~~s~-~~~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfS 141 (358)
++..|.=|+.+.+ +++...|+||..+| .|+....+..+ -.+-+.+=.++|-.|.--|.|=|
T Consensus 18 dG~~L~Gwl~~P~~~~~~~~~~vIi~HG-f~~~~~~~~~~-----------------A~~La~~G~~vLrfD~rg~~GeS 79 (307)
T PRK13604 18 NGQSIRVWETLPKENSPKKNNTILIASG-FARRMDHFAGL-----------------AEYLSSNGFHVIRYDSLHHVGLS 79 (307)
T ss_pred CCCEEEEEEEcCcccCCCCCCEEEEeCC-CCCChHHHHHH-----------------HHHHHHCCCEEEEecCCCCCCCC
Confidence 3677887777774 34566788888775 44442201111 11223334578888876667877
Q ss_pred cccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeec
Q 018329 142 YTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGN 221 (358)
Q Consensus 142 y~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~ign 221 (358)
-++- .+.....-...+....++++ ... ..+++|.|+|-||..+...|. ..+++++++..
T Consensus 80 ~G~~-~~~t~s~g~~Dl~aaid~lk----~~~---~~~I~LiG~SmGgava~~~A~-------------~~~v~~lI~~s 138 (307)
T PRK13604 80 SGTI-DEFTMSIGKNSLLTVVDWLN----TRG---INNLGLIAASLSARIAYEVIN-------------EIDLSFLITAV 138 (307)
T ss_pred CCcc-ccCcccccHHHHHHHHHHHH----hcC---CCceEEEEECHHHHHHHHHhc-------------CCCCCEEEEcC
Confidence 4321 11211011222333344443 321 347999999999987433321 13488899999
Q ss_pred cccC
Q 018329 222 AVIN 225 (358)
Q Consensus 222 g~~d 225 (358)
|+.+
T Consensus 139 p~~~ 142 (307)
T PRK13604 139 GVVN 142 (307)
T ss_pred Cccc
Confidence 9887
No 103
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=83.72 E-value=1.5 Score=39.84 Aligned_cols=44 Identities=16% Similarity=0.171 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHH
Q 018329 156 VTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHE 201 (358)
Q Consensus 156 ~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~ 201 (358)
.+-.|+.++.+.|++.++ ++|||+|+|||-|+..+-.|-+...+
T Consensus 75 ~ay~DV~~AF~~yL~~~n--~GRPfILaGHSQGs~~l~~LL~e~~~ 118 (207)
T PF11288_consen 75 LAYSDVRAAFDYYLANYN--NGRPFILAGHSQGSMHLLRLLKEEIA 118 (207)
T ss_pred hhHHHHHHHHHHHHHhcC--CCCCEEEEEeChHHHHHHHHHHHHhc
Confidence 345678888888888876 57899999999999876666554433
No 104
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=82.50 E-value=3.2 Score=38.21 Aligned_cols=86 Identities=12% Similarity=0.006 Sum_probs=57.2
Q ss_pred ceeEeecCcccccccccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccC
Q 018329 128 NMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAG 207 (358)
Q Consensus 128 n~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~ 207 (358)
+...|+-|.+.+-=.+-....+.. +..+-++.+.+.|..+.. ..+++.|+|.|-|+..+-...+++.+....
T Consensus 4 ~~~~V~YPa~f~P~~g~~~~t~~~-Sv~~G~~~L~~ai~~~~~-----~~~~vvV~GySQGA~Va~~~~~~l~~~~~~-- 75 (225)
T PF08237_consen 4 NVVAVDYPASFWPVTGIGSPTYDE-SVAEGVANLDAAIRAAIA-----AGGPVVVFGYSQGAVVASNVLRRLAADGDP-- 75 (225)
T ss_pred ceEEecCCchhcCcCCCCCCccch-HHHHHHHHHHHHHHhhcc-----CCCCEEEEEECHHHHHHHHHHHHHHhcCCC--
Confidence 455677777443211111122333 566677778888887655 477899999999999888888888774321
Q ss_pred CCceeeeeeeEeeccc
Q 018329 208 KDSFINLKGFMIGNAV 223 (358)
Q Consensus 208 ~~~~inLkGi~igng~ 223 (358)
..=+++-+++||+-
T Consensus 76 --~~~~l~fVl~gnP~ 89 (225)
T PF08237_consen 76 --PPDDLSFVLIGNPR 89 (225)
T ss_pred --CcCceEEEEecCCC
Confidence 11458899999985
No 105
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=80.86 E-value=3.6 Score=41.81 Aligned_cols=40 Identities=18% Similarity=0.071 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHH
Q 018329 155 QVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAE 197 (358)
Q Consensus 155 ~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~ 197 (358)
++..+++.+.++..++..+ .+++.|+|||.||.++-.++.
T Consensus 142 ~~~~~~Lk~lIe~~~~~~g---~~kV~LVGHSMGGlva~~fl~ 181 (440)
T PLN02733 142 PETMDGLKKKLETVYKASG---GKKVNIISHSMGGLLVKCFMS 181 (440)
T ss_pred HHHHHHHHHHHHHHHHHcC---CCCEEEEEECHhHHHHHHHHH
Confidence 4567888889998888765 568999999999987766654
No 106
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=80.83 E-value=2.2 Score=38.13 Aligned_cols=39 Identities=23% Similarity=0.320 Sum_probs=30.7
Q ss_pred CCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCCCCC
Q 018329 177 SHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTD 229 (358)
Q Consensus 177 ~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~~~q 229 (358)
...+.|+|-|-||.|+-.+|.+. +++. ++.||.+.|...
T Consensus 58 ~~~~~liGSSlGG~~A~~La~~~-------------~~~a-vLiNPav~p~~~ 96 (187)
T PF05728_consen 58 PENVVLIGSSLGGFYATYLAERY-------------GLPA-VLINPAVRPYEL 96 (187)
T ss_pred CCCeEEEEEChHHHHHHHHHHHh-------------CCCE-EEEcCCCCHHHH
Confidence 44599999999999999887644 2555 788999998654
No 107
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=80.04 E-value=3.7 Score=39.02 Aligned_cols=37 Identities=16% Similarity=0.326 Sum_probs=30.2
Q ss_pred cHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCc
Q 018329 154 DQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGH 190 (358)
Q Consensus 154 ~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~ 190 (358)
-.++++.|.+.+.......|+=..-++|+.|||-|..
T Consensus 85 a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~ 121 (289)
T PF10081_consen 85 AREAARALFEAVYARWSTLPEDRRPKLYLYGESLGAY 121 (289)
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCeEEEeccCcccc
Confidence 4567788888888888888888766799999998754
No 108
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=79.87 E-value=4 Score=41.04 Aligned_cols=98 Identities=18% Similarity=0.169 Sum_probs=56.5
Q ss_pred ccceeEeecCcccccccccC---CCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHH
Q 018329 126 AANMLFLEAPVGVGFSYTNN---SEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHER 202 (358)
Q Consensus 126 ~an~l~iDqP~G~GfSy~~~---~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~ 202 (358)
.|-|+++|.. =.|-|.-.. ..+..-++.+|+-.|+..|++.+-.++....+.|++++|-||||.-..-+-.+-
T Consensus 59 ~a~~v~lEHR-yYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~ky--- 134 (434)
T PF05577_consen 59 GALVVALEHR-YYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKY--- 134 (434)
T ss_dssp TEEEEEE--T-TSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH----
T ss_pred CCcEEEeehh-hhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhC---
Confidence 3557777755 456555211 111222478999999999999988777766777999999999998544443222
Q ss_pred hhccCCCceeeeeeeEeeccccCCCCCCcchhh
Q 018329 203 NIRAGKDSFINLKGFMIGNAVINDPTDTKGLVD 235 (358)
Q Consensus 203 ~~~~~~~~~inLkGi~igng~~d~~~q~~~~~~ 235 (358)
. .+ +.|.+--++-+....+...|.+
T Consensus 135 -P------~~-~~ga~ASSapv~a~~df~~y~~ 159 (434)
T PF05577_consen 135 -P------HL-FDGAWASSAPVQAKVDFWEYFE 159 (434)
T ss_dssp -T------TT--SEEEEET--CCHCCTTTHHHH
T ss_pred -C------Ce-eEEEEeccceeeeecccHHHHH
Confidence 1 12 5576767776666555444443
No 109
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=79.75 E-value=12 Score=42.66 Aligned_cols=103 Identities=12% Similarity=0.145 Sum_probs=65.2
Q ss_pred CCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCcccccccccCCCcccccCcHHHHHH
Q 018329 81 KPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTAND 160 (358)
Q Consensus 81 ~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a~~ 160 (358)
.|-++.++|+.|.+.. |..+.+ .+ .+...++-+|.| |.|-+ ... .. +.++.|++
T Consensus 1068 ~~~l~~lh~~~g~~~~-~~~l~~-----------~l-------~~~~~v~~~~~~-g~~~~---~~~--~~-~l~~la~~ 1121 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQ-FSVLSR-----------YL-------DPQWSIYGIQSP-RPDGP---MQT--AT-SLDEVCEA 1121 (1296)
T ss_pred CCCeEEecCCCCchHH-HHHHHH-----------hc-------CCCCcEEEEECC-CCCCC---CCC--CC-CHHHHHHH
Confidence 3668889998887776 554432 01 123466778877 44432 111 11 56777888
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccc
Q 018329 161 SYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAV 223 (358)
Q Consensus 161 ~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~ 223 (358)
+.+.++. ..| ..++++.|+|+||..+-.+|.++.++. ..+..+++.+++
T Consensus 1122 ~~~~i~~---~~~---~~p~~l~G~S~Gg~vA~e~A~~l~~~~--------~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1122 HLATLLE---QQP---HGPYHLLGYSLGGTLAQGIAARLRARG--------EEVAFLGLLDTW 1170 (1296)
T ss_pred HHHHHHh---hCC---CCCEEEEEechhhHHHHHHHHHHHHcC--------CceeEEEEecCC
Confidence 7777764 233 348999999999999989988776542 235566665553
No 110
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=77.45 E-value=8.1 Score=42.10 Aligned_cols=45 Identities=9% Similarity=0.034 Sum_probs=31.4
Q ss_pred CcHHHHHHHHHHHHHHH------H---HCCCCCCCCeEEeccccCCccHHHHHH
Q 018329 153 GDQVTANDSYAFLIGWF------K---RFPNFKSHDFYIAGESYAGHYVPQLAE 197 (358)
Q Consensus 153 ~~~~~a~~~~~fl~~f~------~---~fp~~~~~~~yi~GeSYgG~yvp~la~ 197 (358)
+-++.+.|++......- + .+..+...++++.|||-||.....++.
T Consensus 521 n~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~ 574 (792)
T TIGR03502 521 NLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIA 574 (792)
T ss_pred CHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHH
Confidence 45677777776555432 1 123355678999999999999888874
No 111
>COG4425 Predicted membrane protein [Function unknown]
Probab=75.65 E-value=6.6 Score=39.70 Aligned_cols=37 Identities=19% Similarity=0.438 Sum_probs=32.3
Q ss_pred cHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCc
Q 018329 154 DQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGH 190 (358)
Q Consensus 154 ~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~ 190 (358)
-.++|+.+.++.-.....-|+=++-++|+.|||-|..
T Consensus 373 g~~aa~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa~ 409 (588)
T COG4425 373 GADAARALFEAVYGYWTQLPKSSRPKLYLHGESLGAM 409 (588)
T ss_pred chhHHHHHHHHHHHHHHhCCcCCCCceEEeccccccc
Confidence 4578999999999999999998877899999998754
No 112
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=75.33 E-value=13 Score=37.45 Aligned_cols=36 Identities=14% Similarity=0.123 Sum_probs=24.7
Q ss_pred CCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeecccc
Q 018329 178 HDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVI 224 (358)
Q Consensus 178 ~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~ 224 (358)
....|+|.|+||.-.-++|.+-.+ .+.+++..+|.+
T Consensus 288 ~~~~IaG~S~GGl~AL~~al~~Pd-----------~Fg~v~s~Sgs~ 323 (411)
T PRK10439 288 DRTVVAGQSFGGLAALYAGLHWPE-----------RFGCVLSQSGSF 323 (411)
T ss_pred cceEEEEEChHHHHHHHHHHhCcc-----------cccEEEEeccce
Confidence 358999999999876665542211 167777777764
No 113
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=74.94 E-value=4.9 Score=40.07 Aligned_cols=53 Identities=8% Similarity=-0.062 Sum_probs=34.8
Q ss_pred CcHHHHHHHHHHHHHHHHHCCCCCCCCeE-EeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccc
Q 018329 153 GDQVTANDSYAFLIGWFKRFPNFKSHDFY-IAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAV 223 (358)
Q Consensus 153 ~~~~~a~~~~~fl~~f~~~fp~~~~~~~y-i~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~ 223 (358)
+..+.++++.++|+. . .-++++ |.|+|.||..+-.+|.+-.+. ++++++.++.
T Consensus 142 t~~d~~~~~~~ll~~----l---gi~~~~~vvG~SmGG~ial~~a~~~P~~-----------v~~lv~ia~~ 195 (389)
T PRK06765 142 TILDFVRVQKELIKS----L---GIARLHAVMGPSMGGMQAQEWAVHYPHM-----------VERMIGVIGN 195 (389)
T ss_pred cHHHHHHHHHHHHHH----c---CCCCceEEEEECHHHHHHHHHHHHChHh-----------hheEEEEecC
Confidence 555556666666643 2 234576 999999999888887655443 5666666553
No 114
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=74.68 E-value=0.92 Score=44.27 Aligned_cols=70 Identities=13% Similarity=0.221 Sum_probs=46.1
Q ss_pred ccceeEeecCcccccccccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHH
Q 018329 126 AANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHE 201 (358)
Q Consensus 126 ~an~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~ 201 (358)
-.|||.||=-.+..-.|... . .+...+++.+..||+.....+ .+...+++|+|+|-|+|.+-.+++++..
T Consensus 104 d~NVI~VDWs~~a~~~Y~~a----~-~n~~~vg~~la~~l~~L~~~~-g~~~~~ihlIGhSLGAHvaG~aG~~~~~ 173 (331)
T PF00151_consen 104 DYNVIVVDWSRGASNNYPQA----V-ANTRLVGRQLAKFLSFLINNF-GVPPENIHLIGHSLGAHVAGFAGKYLKG 173 (331)
T ss_dssp -EEEEEEE-HHHHSS-HHHH----H-HHHHHHHHHHHHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT
T ss_pred CceEEEEcchhhccccccch----h-hhHHHHHHHHHHHHHHHHhhc-CCChhHEEEEeeccchhhhhhhhhhccC
Confidence 57999999555443333211 1 145677788888887766432 2335689999999999999988888765
No 115
>PF03283 PAE: Pectinacetylesterase
Probab=74.12 E-value=27 Score=34.56 Aligned_cols=150 Identities=19% Similarity=0.216 Sum_probs=76.0
Q ss_pred CceEEEEEEeccCCCCCCCeEEEECCCCChhhhhhhh----hhhcCCeE-----EcCCC---CeeecCCCCcccccceeE
Q 018329 64 HKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGA----AQELGPFL-----VGGNG---SRLKFNKYSWNKAANMLF 131 (358)
Q Consensus 64 ~~~lfywf~~s~~~~~~~pl~lwlnGGPG~Ss~~~g~----~~e~GP~~-----~~~~~---~~l~~n~~sW~~~an~l~ 131 (358)
|+.-.|++-+.. ....+-+||.|.||=.|.+.. -. .+++|-.. +..+| ..-..||.=++ .|++|
T Consensus 34 GS~~~yy~~~g~-g~~s~~~li~leGGG~C~~~~-tC~~r~~t~~gss~~~~~~~~~~Gils~~~~~Np~f~~--wN~V~ 109 (361)
T PF03283_consen 34 GSPPGYYFRPGS-GSGSNKWLIFLEGGGWCWDAE-TCAQRSSTNLGSSKNWPKTFAFSGILSNDPAENPDFYN--WNHVF 109 (361)
T ss_pred CCCCcEEEccCC-CCCCceEEEEeccchhcCChh-HHhhhccCccccccchhhhccccccccCCcccCCcccc--ccEEE
Confidence 344445554442 344578999999999998852 22 23344322 11111 12234663222 57788
Q ss_pred eecCcccccccccCCC--cccccCcHHHHHHHH-HHHHHHHHH-CCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccC
Q 018329 132 LEAPVGVGFSYTNNSE--DLHKLGDQVTANDSY-AFLIGWFKR-FPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAG 207 (358)
Q Consensus 132 iDqP~G~GfSy~~~~~--~~~~~~~~~~a~~~~-~fl~~f~~~-fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~ 207 (358)
|= --+|-++.-+.. .+......-....++ +.|....+. +++ ..++.|+|.|=||.=+..-+.+|.+.=..
T Consensus 110 vp--YC~Gd~~~G~~~~~~~~~~~l~frG~~i~~avl~~l~~~gl~~--a~~vlltG~SAGG~g~~~~~d~~~~~lp~-- 183 (361)
T PF03283_consen 110 VP--YCDGDSHSGDVEPVDYGGTTLYFRGYRILRAVLDDLLSNGLPN--AKQVLLTGCSAGGLGAILHADYVRDRLPS-- 183 (361)
T ss_pred EE--ecCCccccCcccccccCCceeEeecHHHHHHHHHHHHHhcCcc--cceEEEeccChHHHHHHHHHHHHHHHhcc--
Confidence 84 444444421111 110000111223333 444444444 443 34699999999998888878777665321
Q ss_pred CCceeeeeeeEeeccccCC
Q 018329 208 KDSFINLKGFMIGNAVIND 226 (358)
Q Consensus 208 ~~~~inLkGi~igng~~d~ 226 (358)
...++++.=..-++|.
T Consensus 184 ---~~~v~~~~DsG~f~d~ 199 (361)
T PF03283_consen 184 ---SVKVKCLSDSGFFLDN 199 (361)
T ss_pred ---CceEEEeccccccccc
Confidence 2445555544444443
No 116
>PLN02571 triacylglycerol lipase
Probab=73.64 E-value=7.8 Score=38.97 Aligned_cols=70 Identities=10% Similarity=0.107 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhcc---CCCceeeeeeeEeeccccCC
Q 018329 156 VTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRA---GKDSFINLKGFMIGNAVIND 226 (358)
Q Consensus 156 ~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~---~~~~~inLkGi~igng~~d~ 226 (358)
.+.++++..|+.+.+++|.. ..+++|+|||-||-.+-..|..|....-.. .....+.+..+..|.|-+..
T Consensus 205 Sar~qvl~eV~~L~~~y~~e-~~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsPRVGN 277 (413)
T PLN02571 205 SARDQVLNEVGRLVEKYKDE-EISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASPRVGD 277 (413)
T ss_pred hHHHHHHHHHHHHHHhcCcc-cccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCCCccC
Confidence 45678889999999988865 336999999999999988888886531100 00123456677777776643
No 117
>PRK14567 triosephosphate isomerase; Provisional
Probab=73.08 E-value=8 Score=36.32 Aligned_cols=62 Identities=16% Similarity=0.248 Sum_probs=46.0
Q ss_pred cHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCCC
Q 018329 154 DQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDP 227 (358)
Q Consensus 154 ~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~~ 227 (358)
+.+.+++...++++++..+-+-....+=|. |||-.-|.=+..|++. -++.|++||.+.+++.
T Consensus 177 s~e~i~~~~~~IR~~l~~~~~~~a~~v~Il---YGGSV~~~N~~~l~~~---------~diDG~LVGgasL~~~ 238 (253)
T PRK14567 177 SLEQIQETHQFIRSLLAKVDERLAKNIKIV---YGGSLKAENAKDILSL---------PDVDGGLIGGASLKAA 238 (253)
T ss_pred CHHHHHHHHHHHHHHHHhhcccccccceEE---EcCcCCHHHHHHHHcC---------CCCCEEEeehhhhcHH
Confidence 356788999999999876522212233343 9999999999999874 3488999999998763
No 118
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=72.17 E-value=20 Score=27.11 Aligned_cols=78 Identities=19% Similarity=0.180 Sum_probs=47.3
Q ss_pred ceEEEEEEeccCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCccccccccc
Q 018329 65 KALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTN 144 (358)
Q Consensus 65 ~~lfywf~~s~~~~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfSy~~ 144 (358)
.+||+..++..+. .+.+|+.++|--..|.. |..+.+ .|..+- .+|+-+|++ |-|.|-+.
T Consensus 2 ~~L~~~~w~p~~~--~k~~v~i~HG~~eh~~r-y~~~a~-----------~L~~~G------~~V~~~D~r-GhG~S~g~ 60 (79)
T PF12146_consen 2 TKLFYRRWKPENP--PKAVVVIVHGFGEHSGR-YAHLAE-----------FLAEQG------YAVFAYDHR-GHGRSEGK 60 (79)
T ss_pred cEEEEEEecCCCC--CCEEEEEeCCcHHHHHH-HHHHHH-----------HHHhCC------CEEEEECCC-cCCCCCCc
Confidence 4677765555433 57899999987555554 555442 222222 367888965 99999642
Q ss_pred CCCcccccCcHHHHHHHHHHHH
Q 018329 145 NSEDLHKLGDQVTANDSYAFLI 166 (358)
Q Consensus 145 ~~~~~~~~~~~~~a~~~~~fl~ 166 (358)
. .+.. +-++..+|+..|++
T Consensus 61 r--g~~~-~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 61 R--GHID-SFDDYVDDLHQFIQ 79 (79)
T ss_pred c--cccC-CHHHHHHHHHHHhC
Confidence 2 2222 55677777777763
No 119
>PRK14566 triosephosphate isomerase; Provisional
Probab=71.23 E-value=9.2 Score=36.05 Aligned_cols=62 Identities=23% Similarity=0.358 Sum_probs=46.1
Q ss_pred cHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCCC
Q 018329 154 DQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDP 227 (358)
Q Consensus 154 ~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~~ 227 (358)
+.+.|+++..||++++...-+.....+=|. |||-.-|.-+..|+.. -++.|++||..-+++.
T Consensus 187 t~e~a~~v~~~IR~~l~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~---------~dIDG~LVGgASL~~~ 248 (260)
T PRK14566 187 TPEQAQEVHAFIRKRLSEVSPFIGENIRIL---YGGSVTPSNAADLFAQ---------PDVDGGLIGGASLNST 248 (260)
T ss_pred CHHHHHHHHHHHHHHHHhcCccccccceEE---ecCCCCHhHHHHHhcC---------CCCCeEEechHhcCHH
Confidence 356689999999999875421112233344 9999999999999865 3489999999988873
No 120
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=70.46 E-value=9.9 Score=33.69 Aligned_cols=65 Identities=20% Similarity=0.136 Sum_probs=40.8
Q ss_pred cccceeEeecCcc--cccccccCCCcccccCcHHHHHHHHHHHHHHHHHC-CCCCCCCeEEeccccCCccHHHHHHH
Q 018329 125 KAANMLFLEAPVG--VGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRF-PNFKSHDFYIAGESYAGHYVPQLAEL 198 (358)
Q Consensus 125 ~~an~l~iDqP~G--~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~f-p~~~~~~~yi~GeSYgG~yvp~la~~ 198 (358)
+.|-|.|++-..- ...+- -...+ -+..|.+|..|++..=..+ | .-.+-++|||||..-+-..+..
T Consensus 62 ~vAvV~WlgYdaP~~~~~~a--~~~~~----A~~ga~~L~~f~~gl~a~~~~---~~~~tv~GHSYGS~v~G~A~~~ 129 (177)
T PF06259_consen 62 SVAVVAWLGYDAPAGGLPDA--ASPGY----ARAGAPRLARFLDGLRATHGP---DAHLTVVGHSYGSTVVGLAAQQ 129 (177)
T ss_pred CeEEEEEcCCCCCCCccccc--cCchH----HHHHHHHHHHHHHHhhhhcCC---CCCEEEEEecchhHHHHHHhhh
Confidence 6788899854443 22221 11111 2355667777777765555 3 3368999999999887766654
No 121
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=69.17 E-value=11 Score=34.56 Aligned_cols=53 Identities=17% Similarity=0.288 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeecc
Q 018329 159 NDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNA 222 (358)
Q Consensus 159 ~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng 222 (358)
+...+++++..+.+++ +++|+|||=||..+-+.|..+.+.... .++.+..-||
T Consensus 69 ~~A~~yl~~~~~~~~~----~i~v~GHSkGGnLA~yaa~~~~~~~~~-------rI~~vy~fDg 121 (224)
T PF11187_consen 69 KSALAYLKKIAKKYPG----KIYVTGHSKGGNLAQYAAANCDDEIQD-------RISKVYSFDG 121 (224)
T ss_pred HHHHHHHHHHHHhCCC----CEEEEEechhhHHHHHHHHHccHHHhh-------heeEEEEeeC
Confidence 4456677777777763 599999999999888888775443221 2555555554
No 122
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=68.75 E-value=7.4 Score=35.57 Aligned_cols=72 Identities=17% Similarity=0.097 Sum_probs=49.1
Q ss_pred ccccccccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeee
Q 018329 137 GVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKG 216 (358)
Q Consensus 137 G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkG 216 (358)
-+||-+++... ..+++-.++.++++--++.+|.-+ .+-+.|+|-|.|-+..+..++. + ..+.|
T Consensus 102 svgY~l~~q~h-----tL~qt~~~~~~gv~filk~~~n~k--~l~~gGHSaGAHLa~qav~R~r--~--------prI~g 164 (270)
T KOG4627|consen 102 SVGYNLCPQVH-----TLEQTMTQFTHGVNFILKYTENTK--VLTFGGHSAGAHLAAQAVMRQR--S--------PRIWG 164 (270)
T ss_pred EeccCcCcccc-----cHHHHHHHHHHHHHHHHHhcccce--eEEEcccchHHHHHHHHHHHhc--C--------chHHH
Confidence 35666654322 567888899999988888888554 4999999999886555544431 1 23677
Q ss_pred eEeeccccC
Q 018329 217 FMIGNAVIN 225 (358)
Q Consensus 217 i~igng~~d 225 (358)
+++-.|+-+
T Consensus 165 l~l~~GvY~ 173 (270)
T KOG4627|consen 165 LILLCGVYD 173 (270)
T ss_pred HHHHhhHhh
Confidence 777777744
No 123
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=68.75 E-value=21 Score=30.61 Aligned_cols=76 Identities=16% Similarity=0.227 Sum_probs=45.6
Q ss_pred ccceeEeecCcccccccccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhc
Q 018329 126 AANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIR 205 (358)
Q Consensus 126 ~an~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~ 205 (358)
...++.+|.| |.|.+-. ... +.+..++.....+. +..+ ..+++++|+|.||..+-.+|.++.++.
T Consensus 25 ~~~v~~~~~~-g~~~~~~-----~~~-~~~~~~~~~~~~l~---~~~~---~~~~~l~g~s~Gg~~a~~~a~~l~~~~-- 89 (212)
T smart00824 25 RRDVSALPLP-GFGPGEP-----LPA-SADALVEAQAEAVL---RAAG---GRPFVLVGHSSGGLLAHAVAARLEARG-- 89 (212)
T ss_pred CccEEEecCC-CCCCCCC-----CCC-CHHHHHHHHHHHHH---HhcC---CCCeEEEEECHHHHHHHHHHHHHHhCC--
Confidence 3567888855 4453321 111 33444554444444 2333 458999999999999988888776542
Q ss_pred cCCCceeeeeeeEeecc
Q 018329 206 AGKDSFINLKGFMIGNA 222 (358)
Q Consensus 206 ~~~~~~inLkGi~igng 222 (358)
..++++++.+.
T Consensus 90 ------~~~~~l~~~~~ 100 (212)
T smart00824 90 ------IPPAAVVLLDT 100 (212)
T ss_pred ------CCCcEEEEEcc
Confidence 22566666654
No 124
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=67.61 E-value=19 Score=33.87 Aligned_cols=111 Identities=21% Similarity=0.263 Sum_probs=68.0
Q ss_pred CCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCcccccccccCCCcccccCcHH
Q 018329 77 GVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQV 156 (358)
Q Consensus 77 ~~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfSy~~~~~~~~~~~~~~ 156 (358)
+....+.+|+.+|- + .+.|...|+ ..+.|=.=..|+.=.|- -|.|.|-++.... +.-.
T Consensus 56 ~~~~~~~lly~hGN---a-~Dlgq~~~~-------------~~~l~~~ln~nv~~~DY-SGyG~S~G~psE~----n~y~ 113 (258)
T KOG1552|consen 56 PEAAHPTLLYSHGN---A-ADLGQMVEL-------------FKELSIFLNCNVVSYDY-SGYGRSSGKPSER----NLYA 113 (258)
T ss_pred ccccceEEEEcCCc---c-cchHHHHHH-------------HHHHhhcccceEEEEec-ccccccCCCcccc----cchh
Confidence 33446899999986 2 212322221 11122222457777784 4999997754432 5566
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCCC
Q 018329 157 TANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDP 227 (358)
Q Consensus 157 ~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~~ 227 (358)
..+..+++|++ ++- +..+++|+|.|-|..-.-.+| .+ .. +.|+++-+|+++-.
T Consensus 114 Di~avye~Lr~---~~g--~~~~Iil~G~SiGt~~tv~La----sr-------~~--~~alVL~SPf~S~~ 166 (258)
T KOG1552|consen 114 DIKAVYEWLRN---RYG--SPERIILYGQSIGTVPTVDLA----SR-------YP--LAAVVLHSPFTSGM 166 (258)
T ss_pred hHHHHHHHHHh---hcC--CCceEEEEEecCCchhhhhHh----hc-------CC--cceEEEeccchhhh
Confidence 67788888875 331 467899999999976422222 11 12 89999999998754
No 125
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=67.20 E-value=72 Score=30.59 Aligned_cols=100 Identities=21% Similarity=0.323 Sum_probs=60.1
Q ss_pred CCCCeEEEECCCCChhhhhh----hhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCcccccccccCCCcccccCc
Q 018329 79 SSKPLVLWLNGGPGCSSIAY----GAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGD 154 (358)
Q Consensus 79 ~~~pl~lwlnGGPG~Ss~~~----g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfSy~~~~~~~~~~~~ 154 (358)
+....|+=++|-||+-== + -.|.|.|= -+|=|.-| |-||+-......| +.
T Consensus 33 s~~gTVv~~hGsPGSH~D-FkYi~~~l~~~~i---------------------R~I~iN~P-Gf~~t~~~~~~~~---~n 86 (297)
T PF06342_consen 33 SPLGTVVAFHGSPGSHND-FKYIRPPLDEAGI---------------------RFIGINYP-GFGFTPGYPDQQY---TN 86 (297)
T ss_pred CCceeEEEecCCCCCccc-hhhhhhHHHHcCe---------------------EEEEeCCC-CCCCCCCCccccc---Ch
Confidence 345589999999997531 1 11222221 12334446 7777654333333 22
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccc
Q 018329 155 QVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAV 223 (358)
Q Consensus 155 ~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~ 223 (358)
..-..|...+++.- +.+ ..+.+.|||-|+--+-.+|... .+.|+++.||.
T Consensus 87 ----~er~~~~~~ll~~l-~i~-~~~i~~gHSrGcenal~la~~~-------------~~~g~~lin~~ 136 (297)
T PF06342_consen 87 ----EERQNFVNALLDEL-GIK-GKLIFLGHSRGCENALQLAVTH-------------PLHGLVLINPP 136 (297)
T ss_pred ----HHHHHHHHHHHHHc-CCC-CceEEEEeccchHHHHHHHhcC-------------ccceEEEecCC
Confidence 34445566666554 343 4688899999999877777533 36799999975
No 126
>PLN02429 triosephosphate isomerase
Probab=63.90 E-value=14 Score=35.74 Aligned_cols=62 Identities=19% Similarity=0.396 Sum_probs=45.8
Q ss_pred cHHHHHHHHHHHHHHHHH-CCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCCC
Q 018329 154 DQVTANDSYAFLIGWFKR-FPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDP 227 (358)
Q Consensus 154 ~~~~a~~~~~fl~~f~~~-fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~~ 227 (358)
..+.++.+.+++++|+.. +.+-....+-|. |||-.-|.-+..|... .+++|++||.+.+++.
T Consensus 237 s~e~~~~v~~~IR~~l~~~~~~~va~~irIL---YGGSV~~~N~~el~~~---------~diDG~LVGgASL~~~ 299 (315)
T PLN02429 237 SPQQAQEVHVAVRGWLKKNVSEEVASKTRII---YGGSVNGGNSAELAKE---------EDIDGFLVGGASLKGP 299 (315)
T ss_pred CHHHHHHHHHHHHHHHHHHhhhhhccCceEE---EcCccCHHHHHHHhcC---------CCCCEEEeecceecHH
Confidence 345688899999999864 432222344454 9999999999888764 4589999999998764
No 127
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=63.75 E-value=17 Score=38.45 Aligned_cols=110 Identities=22% Similarity=0.268 Sum_probs=59.4
Q ss_pred CCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccc------c----ceeEeecCcccccccccCCCcc
Q 018329 80 SKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKA------A----NMLFLEAPVGVGFSYTNNSEDL 149 (358)
Q Consensus 80 ~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~------a----n~l~iDqP~G~GfSy~~~~~~~ 149 (358)
+-|++|.+-||||. .++.|.++|.+. | =|++||.. |+- - .+..+
T Consensus 641 kYptvl~VYGGP~V---------------------QlVnnsfkgi~ylR~~~LaslGy~Vv~IDnR-GS~---h-RGlkF 694 (867)
T KOG2281|consen 641 KYPTVLNVYGGPGV---------------------QLVNNSFKGIQYLRFCRLASLGYVVVFIDNR-GSA---H-RGLKF 694 (867)
T ss_pred CCceEEEEcCCCce---------------------EEeeccccceehhhhhhhhhcceEEEEEcCC-Ccc---c-cchhh
Confidence 46999999999984 344566666552 1 25899954 321 0 00000
Q ss_pred c-----ccCcHHHHHHHHHHHHHHHHHCCCCCC-CCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccc
Q 018329 150 H-----KLGDQVTANDSYAFLIGWFKRFPNFKS-HDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAV 223 (358)
Q Consensus 150 ~-----~~~~~~~a~~~~~fl~~f~~~fp~~~~-~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~ 223 (358)
. ..+.. .++|-.+.|+-.-++.- |.. ..+-|-|-||||-. +...+.+. ++| ++-.+-|.|+
T Consensus 695 E~~ik~kmGqV-E~eDQVeglq~Laeq~g-fidmdrV~vhGWSYGGYL----Slm~L~~~------P~I-frvAIAGapV 761 (867)
T KOG2281|consen 695 ESHIKKKMGQV-EVEDQVEGLQMLAEQTG-FIDMDRVGVHGWSYGGYL----SLMGLAQY------PNI-FRVAIAGAPV 761 (867)
T ss_pred HHHHhhccCee-eehhhHHHHHHHHHhcC-cccchheeEeccccccHH----HHHHhhcC------cce-eeEEeccCcc
Confidence 0 00111 12333344443333322 222 25899999999963 33333332 223 7777888888
Q ss_pred cCCCC
Q 018329 224 INDPT 228 (358)
Q Consensus 224 ~d~~~ 228 (358)
++...
T Consensus 762 T~W~~ 766 (867)
T KOG2281|consen 762 TDWRL 766 (867)
T ss_pred eeeee
Confidence 88754
No 128
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=63.71 E-value=7.5 Score=35.03 Aligned_cols=57 Identities=26% Similarity=0.317 Sum_probs=40.9
Q ss_pred cccccccccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHH
Q 018329 136 VGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIH 200 (358)
Q Consensus 136 ~G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~ 200 (358)
-|||=|.+.-.... ++.+.|....++++ ++||+-+ .+.+.|-|+|+-.+-.+|.+.-
T Consensus 69 RgVG~S~G~fD~Gi---GE~~Da~aaldW~~---~~hp~s~--~~~l~GfSFGa~Ia~~la~r~~ 125 (210)
T COG2945 69 RGVGRSQGEFDNGI---GELEDAAAALDWLQ---ARHPDSA--SCWLAGFSFGAYIAMQLAMRRP 125 (210)
T ss_pred cccccccCcccCCc---chHHHHHHHHHHHH---hhCCCch--hhhhcccchHHHHHHHHHHhcc
Confidence 48999977543332 66777777787777 5898654 3799999999877766666553
No 129
>PLN02753 triacylglycerol lipase
Probab=63.63 E-value=17 Score=37.66 Aligned_cols=72 Identities=13% Similarity=0.085 Sum_probs=49.9
Q ss_pred cHHHHHHHHHHHHHHHHHCCC--CCCCCeEEeccccCCccHHHHHHHHHHHhhcc-CCCceeeeeeeEeeccccC
Q 018329 154 DQVTANDSYAFLIGWFKRFPN--FKSHDFYIAGESYAGHYVPQLAELIHERNIRA-GKDSFINLKGFMIGNAVIN 225 (358)
Q Consensus 154 ~~~~a~~~~~fl~~f~~~fp~--~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~-~~~~~inLkGi~igng~~d 225 (358)
...+.+++...++...+++|. .....++|+|||-||-.+-..|..|.+..-.. .....+++.-+..|.|-+.
T Consensus 286 k~S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRVG 360 (531)
T PLN02753 286 KFSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRVG 360 (531)
T ss_pred hhhHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCcc
Confidence 456778899999999988874 22457999999999999888888887532110 0112355666777776654
No 130
>PRK11071 esterase YqiA; Provisional
Probab=63.30 E-value=8.4 Score=34.12 Aligned_cols=34 Identities=18% Similarity=0.227 Sum_probs=23.9
Q ss_pred HHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHH
Q 018329 162 YAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAEL 198 (358)
Q Consensus 162 ~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~ 198 (358)
.+++..+.+... .++++|+|.|.||.++-.+|.+
T Consensus 48 ~~~l~~l~~~~~---~~~~~lvG~S~Gg~~a~~~a~~ 81 (190)
T PRK11071 48 AELLESLVLEHG---GDPLGLVGSSLGGYYATWLSQC 81 (190)
T ss_pred HHHHHHHHHHcC---CCCeEEEEECHHHHHHHHHHHH
Confidence 334444444432 4589999999999988888764
No 131
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=63.15 E-value=10 Score=36.86 Aligned_cols=55 Identities=9% Similarity=-0.040 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCCC
Q 018329 159 NDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDP 227 (358)
Q Consensus 159 ~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~~ 227 (358)
+++.++++...++.+ ..++++.|+|.||..+-.++.. .. -.++++++.++.++..
T Consensus 120 ~~~~~~v~~l~~~~~---~~~i~lvGhS~GG~i~~~~~~~----~~-------~~v~~lv~~~~p~~~~ 174 (350)
T TIGR01836 120 GYIDKCVDYICRTSK---LDQISLLGICQGGTFSLCYAAL----YP-------DKIKNLVTMVTPVDFE 174 (350)
T ss_pred HHHHHHHHHHHHHhC---CCcccEEEECHHHHHHHHHHHh----Cc-------hheeeEEEeccccccC
Confidence 345555555555554 4589999999999876555432 11 1277888888777653
No 132
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=62.91 E-value=15 Score=36.87 Aligned_cols=65 Identities=23% Similarity=0.308 Sum_probs=39.1
Q ss_pred cceeEee-------cCcccccccccCC-CcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHH
Q 018329 127 ANMLFLE-------APVGVGFSYTNNS-EDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQL 195 (358)
Q Consensus 127 an~l~iD-------qP~G~GfSy~~~~-~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~l 195 (358)
|-|+|+| +|.|.- ||.+.. -.|- +.+|+-.|+.++|+ ++++.+-=+..|++.+|-||||+-..-+
T Consensus 112 AllVFaEHRyYGeS~PFG~~-s~k~~~hlgyL--tseQALADfA~ll~-~lK~~~~a~~~pvIafGGSYGGMLaAWf 184 (492)
T KOG2183|consen 112 ALLVFAEHRYYGESLPFGSQ-SYKDARHLGYL--TSEQALADFAELLT-FLKRDLSAEASPVIAFGGSYGGMLAAWF 184 (492)
T ss_pred ceEEEeehhccccCCCCcch-hccChhhhccc--cHHHHHHHHHHHHH-HHhhccccccCcEEEecCchhhHHHHHH
Confidence 5577777 466655 443211 1343 45666666665554 4555544455689999999999755433
No 133
>PLN02561 triosephosphate isomerase
Probab=62.37 E-value=17 Score=34.19 Aligned_cols=61 Identities=16% Similarity=0.306 Sum_probs=45.5
Q ss_pred cHHHHHHHHHHHHHHHHH-CCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCC
Q 018329 154 DQVTANDSYAFLIGWFKR-FPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVIND 226 (358)
Q Consensus 154 ~~~~a~~~~~fl~~f~~~-fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~ 226 (358)
+.+.++++..++++++.+ |..-....+-|. |||-.-|.-+..|... .++.|++||.+.+|+
T Consensus 178 s~~~~~~v~~~Ir~~l~~~~~~~~a~~i~IL---YGGSV~~~N~~~l~~~---------~~iDG~LVG~ASL~~ 239 (253)
T PLN02561 178 TPAQAQEVHDELRKWLHKNVSPEVAATTRII---YGGSVTGANCKELAAQ---------PDVDGFLVGGASLKP 239 (253)
T ss_pred CHHHHHHHHHHHHHHHHHhhcccccccceEE---EeCCcCHHHHHHHhcC---------CCCCeEEEehHhhHH
Confidence 345688889999988853 433323345554 9999999999988764 458999999999986
No 134
>PLN02408 phospholipase A1
Probab=62.11 E-value=18 Score=35.84 Aligned_cols=46 Identities=11% Similarity=0.035 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHH
Q 018329 156 VTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHER 202 (358)
Q Consensus 156 ~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~ 202 (358)
.+.+++.+-+++..+++|.. ...++|+|||-||-.+-..|..|.+.
T Consensus 179 s~r~qVl~eI~~ll~~y~~~-~~sI~vTGHSLGGALAtLaA~dl~~~ 224 (365)
T PLN02408 179 SLQEMVREEIARLLQSYGDE-PLSLTITGHSLGAALATLTAYDIKTT 224 (365)
T ss_pred hHHHHHHHHHHHHHHhcCCC-CceEEEeccchHHHHHHHHHHHHHHh
Confidence 45677888889988999865 33699999999999988888877653
No 135
>PLN02802 triacylglycerol lipase
Probab=61.50 E-value=17 Score=37.51 Aligned_cols=63 Identities=8% Similarity=0.070 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeecccc
Q 018329 156 VTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVI 224 (358)
Q Consensus 156 ~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~ 224 (358)
.+.+++..-++.+++++|.-. ..++|+|||-||-..-..|..|.+.... .+.+.-+..|.|-+
T Consensus 309 S~reqVl~eV~~Ll~~Y~~e~-~sI~VTGHSLGGALAtLaA~dL~~~~~~-----~~pV~vyTFGsPRV 371 (509)
T PLN02802 309 SLSESVVGEVRRLMEKYKGEE-LSITVTGHSLGAALALLVADELATCVPA-----APPVAVFSFGGPRV 371 (509)
T ss_pred hHHHHHHHHHHHHHHhCCCCc-ceEEEeccchHHHHHHHHHHHHHHhCCC-----CCceEEEEcCCCCc
Confidence 456788888888888887432 3699999999999988888887654221 12344555555544
No 136
>PLN02847 triacylglycerol lipase
Probab=61.32 E-value=13 Score=38.99 Aligned_cols=60 Identities=20% Similarity=0.289 Sum_probs=37.6
Q ss_pred CcHHHHHHHH----HHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeec
Q 018329 153 GDQVTANDSY----AFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGN 221 (358)
Q Consensus 153 ~~~~~a~~~~----~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~ign 221 (358)
+--.+|+.+. ..|++-++.+|.| ++.|+|||.||-.+..++..+.+ +.. .-+++.+..|-
T Consensus 225 Gml~AArwI~~~i~~~L~kal~~~PdY---kLVITGHSLGGGVAALLAilLRe-~~~-----fssi~CyAFgP 288 (633)
T PLN02847 225 GMVAAARWIAKLSTPCLLKALDEYPDF---KIKIVGHSLGGGTAALLTYILRE-QKE-----FSSTTCVTFAP 288 (633)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHCCCC---eEEEeccChHHHHHHHHHHHHhc-CCC-----CCCceEEEecC
Confidence 3444444444 4445556678866 69999999999988777665533 221 23455666664
No 137
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=61.04 E-value=9.9 Score=33.54 Aligned_cols=82 Identities=12% Similarity=0.126 Sum_probs=51.0
Q ss_pred ceeEeecCcccccccccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHH--HHHHhhc
Q 018329 128 NMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAEL--IHERNIR 205 (358)
Q Consensus 128 n~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~--i~~~~~~ 205 (358)
++--|+-|+..+.. .|.. +....+.++...|+.+.++-| +.++.|+|-|-|++.+-..+.. +...
T Consensus 41 ~~~~V~YpA~~~~~------~y~~-S~~~G~~~~~~~i~~~~~~CP---~~kivl~GYSQGA~V~~~~~~~~~l~~~--- 107 (179)
T PF01083_consen 41 AVQGVEYPASLGPN------SYGD-SVAAGVANLVRLIEEYAARCP---NTKIVLAGYSQGAMVVGDALSGDGLPPD--- 107 (179)
T ss_dssp EEEE--S---SCGG------SCHH-HHHHHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHTTSSHH---
T ss_pred EEEecCCCCCCCcc------cccc-cHHHHHHHHHHHHHHHHHhCC---CCCEEEEecccccHHHHHHHHhccCChh---
Confidence 33446677766652 1222 566778889999999999999 5589999999999887777665 1111
Q ss_pred cCCCceeeeee-eEeeccccCC
Q 018329 206 AGKDSFINLKG-FMIGNAVIND 226 (358)
Q Consensus 206 ~~~~~~inLkG-i~igng~~d~ 226 (358)
..=++++ +++|||...+
T Consensus 108 ----~~~~I~avvlfGdP~~~~ 125 (179)
T PF01083_consen 108 ----VADRIAAVVLFGDPRRGA 125 (179)
T ss_dssp ----HHHHEEEEEEES-TTTBT
T ss_pred ----hhhhEEEEEEecCCcccC
Confidence 1123555 6888887644
No 138
>PLN00413 triacylglycerol lipase
Probab=60.60 E-value=9.8 Score=38.87 Aligned_cols=39 Identities=18% Similarity=0.284 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHH
Q 018329 160 DSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHE 201 (358)
Q Consensus 160 ~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~ 201 (358)
++...|++.++.+|++ +++|+|||-||..+-..|..+..
T Consensus 269 ~i~~~Lk~ll~~~p~~---kliVTGHSLGGALAtLaA~~L~~ 307 (479)
T PLN00413 269 TILRHLKEIFDQNPTS---KFILSGHSLGGALAILFTAVLIM 307 (479)
T ss_pred HHHHHHHHHHHHCCCC---eEEEEecCHHHHHHHHHHHHHHh
Confidence 5677888888888844 69999999999998887776653
No 139
>PLN02934 triacylglycerol lipase
Probab=60.03 E-value=21 Score=36.82 Aligned_cols=40 Identities=18% Similarity=0.208 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHH
Q 018329 159 NDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHE 201 (358)
Q Consensus 159 ~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~ 201 (358)
.++...|+++.+++|.+ +++++|||-||-.+-..|..+..
T Consensus 305 ~~v~~~lk~ll~~~p~~---kIvVTGHSLGGALAtLaA~~L~l 344 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNA---KFVVTGHSLGGALAILFPTVLVL 344 (515)
T ss_pred HHHHHHHHHHHHHCCCC---eEEEeccccHHHHHHHHHHHHHH
Confidence 45778888888999865 69999999999988777766654
No 140
>PLN02719 triacylglycerol lipase
Probab=59.41 E-value=14 Score=38.04 Aligned_cols=71 Identities=14% Similarity=0.180 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHHHHHCCCCC--CCCeEEeccccCCccHHHHHHHHHHHhhcc-CCCceeeeeeeEeeccccC
Q 018329 155 QVTANDSYAFLIGWFKRFPNFK--SHDFYIAGESYAGHYVPQLAELIHERNIRA-GKDSFINLKGFMIGNAVIN 225 (358)
Q Consensus 155 ~~~a~~~~~fl~~f~~~fp~~~--~~~~yi~GeSYgG~yvp~la~~i~~~~~~~-~~~~~inLkGi~igng~~d 225 (358)
..+.+++...|++..+++|... ...++|+|||-||-.+-..|..|.+..-.. .....+.+.-+..|.|-+.
T Consensus 273 ~SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRVG 346 (518)
T PLN02719 273 FSAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRVG 346 (518)
T ss_pred hhHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCcc
Confidence 4567789999999999998652 346999999999999988888887642110 0011244556666766554
No 141
>PLN02324 triacylglycerol lipase
Probab=57.81 E-value=17 Score=36.60 Aligned_cols=70 Identities=11% Similarity=0.054 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhcc----CCCceeeeeeeEeeccccC
Q 018329 155 QVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRA----GKDSFINLKGFMIGNAVIN 225 (358)
Q Consensus 155 ~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~----~~~~~inLkGi~igng~~d 225 (358)
..+-+++...|++..+++|... ..++|+|||-||-.+-..|..|.+..... .....+++.-+..|.|-+.
T Consensus 193 ~SareqVl~eV~~L~~~Yp~e~-~sItvTGHSLGGALAtLaA~dl~~~~~n~~~~~~~~~~~~V~v~TFGsPRVG 266 (415)
T PLN02324 193 TSAQEQVQGELKRLLELYKNEE-ISITFTGHSLGAVMSVLSAADLVYGKKNKINISLQKKQVPITVFAFGSPRIG 266 (415)
T ss_pred hHHHHHHHHHHHHHHHHCCCCC-ceEEEecCcHHHHHHHHHHHHHHHhcccccccccccCCCceEEEEecCCCcC
Confidence 4566788888999999888542 36999999999999888888887631100 0011244555556665543
No 142
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=57.75 E-value=70 Score=32.92 Aligned_cols=33 Identities=15% Similarity=0.182 Sum_probs=22.5
Q ss_pred HHHHHHHHHHCCCCCCCCeEEeccccCCccHHHH
Q 018329 162 YAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQL 195 (358)
Q Consensus 162 ~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~l 195 (358)
++++++..+.|--= ..++=|+|||=|++-|-.+
T Consensus 165 LkWV~~NIe~FGGD-p~NVTl~GeSAGa~si~~L 197 (491)
T COG2272 165 LKWVRDNIEAFGGD-PQNVTLFGESAGAASILTL 197 (491)
T ss_pred HHHHHHHHHHhCCC-ccceEEeeccchHHHHHHh
Confidence 45556666666432 3469999999998876544
No 143
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=57.66 E-value=56 Score=29.85 Aligned_cols=36 Identities=14% Similarity=0.066 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHHHC--CCCCCCCeEEeccccCCc
Q 018329 155 QVTANDSYAFLIGWFKRF--PNFKSHDFYIAGESYAGH 190 (358)
Q Consensus 155 ~~~a~~~~~fl~~f~~~f--p~~~~~~~yi~GeSYgG~ 190 (358)
...++.+.+.++...+.+ ..-..+++.|+|||.||.
T Consensus 60 ~~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGl 97 (225)
T PF07819_consen 60 QRQAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGL 97 (225)
T ss_pred HHHHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhH
Confidence 345666666776666655 222466899999999997
No 144
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=57.40 E-value=26 Score=34.02 Aligned_cols=144 Identities=11% Similarity=0.130 Sum_probs=66.7
Q ss_pred CceEEEEEEeccCCCCCCCeEEEECCCCChhhhhh--hhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCcccccc
Q 018329 64 HKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAY--GAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFS 141 (358)
Q Consensus 64 ~~~lfywf~~s~~~~~~~pl~lwlnGGPG~Ss~~~--g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfS 141 (358)
+..++=|+...++....-|.||.++|..|.+.... -.+...|=..+..|-...- .+..+..-...+..-|+-
T Consensus 66 g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~~a~~G~~vl~~d~rGqg------~~~~d~~~~~~~~~~g~~ 139 (320)
T PF05448_consen 66 GSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLPWAAAGYAVLAMDVRGQG------GRSPDYRGSSGGTLKGHI 139 (320)
T ss_dssp GEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHHHHHTT-EEEEE--TTTS------SSS-B-SSBSSS-SSSST
T ss_pred CCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCcccccccccCCeEEEEecCCCCC------CCCCCccccCCCCCccHH
Confidence 56777676666544567899999999877754411 1233344333322210000 000000000111122222
Q ss_pred cccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeec
Q 018329 142 YTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGN 221 (358)
Q Consensus 142 y~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~ign 221 (358)
...-.....+.=-..+..|.+.++ .|+...|+.-.+.+.++|+|-||...-.+|. +. . .++.++...
T Consensus 140 ~~g~~~~~e~~yyr~~~~D~~rav-d~l~slpevD~~rI~v~G~SqGG~lal~~aa-Ld---~--------rv~~~~~~v 206 (320)
T PF05448_consen 140 TRGIDDNPEDYYYRRVYLDAVRAV-DFLRSLPEVDGKRIGVTGGSQGGGLALAAAA-LD---P--------RVKAAAADV 206 (320)
T ss_dssp TTTTTS-TTT-HHHHHHHHHHHHH-HHHHTSTTEEEEEEEEEEETHHHHHHHHHHH-HS---S--------T-SEEEEES
T ss_pred hcCccCchHHHHHHHHHHHHHHHH-HHHHhCCCcCcceEEEEeecCchHHHHHHHH-hC---c--------cccEEEecC
Confidence 110000000000012233444444 3567789998889999999999987665554 21 1 278888888
Q ss_pred cccCC
Q 018329 222 AVIND 226 (358)
Q Consensus 222 g~~d~ 226 (358)
|++..
T Consensus 207 P~l~d 211 (320)
T PF05448_consen 207 PFLCD 211 (320)
T ss_dssp ESSSS
T ss_pred CCccc
Confidence 87654
No 145
>PLN03082 Iron-sulfur cluster assembly; Provisional
Probab=56.08 E-value=7 Score=34.19 Aligned_cols=63 Identities=24% Similarity=0.354 Sum_probs=43.5
Q ss_pred CCCCeEEEECCCCChhhhhhhhhhhcCC----eEEcCCCCeeecCCCC--cccccceeEeecCccccccc
Q 018329 79 SSKPLVLWLNGGPGCSSIAYGAAQELGP----FLVGGNGSRLKFNKYS--WNKAANMLFLEAPVGVGFSY 142 (358)
Q Consensus 79 ~~~pl~lwlnGGPG~Ss~~~g~~~e~GP----~~~~~~~~~l~~n~~s--W~~~an~l~iDqP~G~GfSy 142 (358)
...+|=|-+.|| |||++.|++=.+.-| ..+..++-++...+.| +-+-+.|=|+|...|.||-.
T Consensus 76 ~~~~LRl~V~~g-GCSG~~Y~~~ld~~~~~~D~v~e~~Gv~vvVD~~s~~~L~Gs~IDYve~l~~~gF~f 144 (163)
T PLN03082 76 EDKMLRLSVETG-GCSGFQYVFELDDKTNSDDRVFEKDGVKLVVDNISYDFVKGATVDYVEELIRSAFVV 144 (163)
T ss_pred CCceEEEEEecC-CCCCceeeeEEccCCCCCCEEEecCCeEEEECHHHHHHhCCCEEEeecCCCCCeeEE
Confidence 345789999999 999986555333222 4455555566666655 55566788999999999987
No 146
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=55.42 E-value=17 Score=32.94 Aligned_cols=49 Identities=16% Similarity=0.236 Sum_probs=36.6
Q ss_pred CcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHH
Q 018329 153 GDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHER 202 (358)
Q Consensus 153 ~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~ 202 (358)
+.+..++.+.+.|.+..+..+.- .+++.+.|+|-||.++=+....+.+.
T Consensus 54 gI~~~g~rL~~eI~~~~~~~~~~-~~~IsfIgHSLGGli~r~al~~~~~~ 102 (217)
T PF05057_consen 54 GIDVCGERLAEEILEHIKDYESK-IRKISFIGHSLGGLIARYALGLLHDK 102 (217)
T ss_pred hhHHHHHHHHHHHHHhccccccc-cccceEEEecccHHHHHHHHHHhhhc
Confidence 45567788888888877766543 45899999999999987666656554
No 147
>PTZ00333 triosephosphate isomerase; Provisional
Probab=54.57 E-value=27 Score=32.78 Aligned_cols=61 Identities=18% Similarity=0.346 Sum_probs=45.0
Q ss_pred cHHHHHHHHHHHHHHHHH-CCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCC
Q 018329 154 DQVTANDSYAFLIGWFKR-FPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVIND 226 (358)
Q Consensus 154 ~~~~a~~~~~fl~~f~~~-fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~ 226 (358)
+.+.++++..++++++.. +.......+-|. |||-.-|.-+..|... .++.|++||.+.+++
T Consensus 181 ~~e~i~~~~~~IR~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~---------~~vDG~LvG~asl~~ 242 (255)
T PTZ00333 181 TPEQAQEVHAFIRKWLAEKVGADVAEATRII---YGGSVNEKNCKELIKQ---------PDIDGFLVGGASLKP 242 (255)
T ss_pred CHHHHHHHHHHHHHHHHHhhcccccccceEE---EcCCCCHHHHHHHhcC---------CCCCEEEEehHhhhh
Confidence 356688899999998753 433323344444 9999999999988764 458999999998873
No 148
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=54.53 E-value=44 Score=34.36 Aligned_cols=44 Identities=18% Similarity=0.237 Sum_probs=35.0
Q ss_pred cCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHH
Q 018329 152 LGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQL 195 (358)
Q Consensus 152 ~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~l 195 (358)
.+.+++-.|+.+|++.-=.+|+.-.+.+++.+|-||.|....=+
T Consensus 146 LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~ 189 (514)
T KOG2182|consen 146 LSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWF 189 (514)
T ss_pred hhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHH
Confidence 36788889999999887788876655689999999999754443
No 149
>PLN02310 triacylglycerol lipase
Probab=54.35 E-value=26 Score=35.17 Aligned_cols=64 Identities=8% Similarity=0.011 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHHHHCCCC-CCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccC
Q 018329 156 VTANDSYAFLIGWFKRFPNF-KSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVIN 225 (358)
Q Consensus 156 ~~a~~~~~fl~~f~~~fp~~-~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d 225 (358)
.+.+++...++...+.+++- ....+.|+|||-||-.+-..|..|.+.. +.+++.-+..|.|-+.
T Consensus 186 sa~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~------~~~~v~vyTFGsPRVG 250 (405)
T PLN02310 186 SASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTI------PDLFVSVISFGAPRVG 250 (405)
T ss_pred hHHHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhC------cCcceeEEEecCCCcc
Confidence 45567777777777776532 2346999999999998877776665421 1244556666666554
No 150
>PLN02162 triacylglycerol lipase
Probab=54.12 E-value=16 Score=37.26 Aligned_cols=40 Identities=15% Similarity=0.252 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHH
Q 018329 159 NDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHE 201 (358)
Q Consensus 159 ~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~ 201 (358)
..+.+.|+..++++|.+ +++++|||-||-.+-..|..+..
T Consensus 262 ~~I~~~L~~lL~k~p~~---kliVTGHSLGGALAtLaAa~L~~ 301 (475)
T PLN02162 262 YTIRQMLRDKLARNKNL---KYILTGHSLGGALAALFPAILAI 301 (475)
T ss_pred HHHHHHHHHHHHhCCCc---eEEEEecChHHHHHHHHHHHHHH
Confidence 34566777788888854 69999999999987776665543
No 151
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=53.99 E-value=23 Score=34.15 Aligned_cols=73 Identities=11% Similarity=0.018 Sum_probs=42.6
Q ss_pred CcHHHHHHHHHHHHHHHHHCCC-CCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCCCCCCc
Q 018329 153 GDQVTANDSYAFLIGWFKRFPN-FKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTK 231 (358)
Q Consensus 153 ~~~~~a~~~~~fl~~f~~~fp~-~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~~~q~~ 231 (358)
+.++.++++.++++.+-..... +...++.|.|||=|..=+-.... ..+.. ...-.++|+++-.|+-|.+....
T Consensus 82 SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~---~~~~~---~~~~~VdG~ILQApVSDREa~~~ 155 (303)
T PF08538_consen 82 SLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLS---SPNPS---PSRPPVDGAILQAPVSDREAILN 155 (303)
T ss_dssp -HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHH---H-TT------CCCEEEEEEEEE---TTSTTT
T ss_pred hhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHh---ccCcc---ccccceEEEEEeCCCCChhHhhh
Confidence 6677788888888766555322 34568999999999876544433 22211 11356999999999998876443
No 152
>cd00311 TIM Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate. The reaction is very efficient and requires neither cofactors nor metal ions. TIM, usually homodimeric, but in some organisms tetrameric, is ubiqitous and conserved in function across eukaryotes, bacteria and archaea.
Probab=53.57 E-value=33 Score=31.92 Aligned_cols=59 Identities=19% Similarity=0.358 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHHHHH-CCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCC
Q 018329 155 QVTANDSYAFLIGWFKR-FPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVIND 226 (358)
Q Consensus 155 ~~~a~~~~~fl~~f~~~-fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~ 226 (358)
.+.+++...++++++.. +.+ ....+-|. |||-.-|.=+..+++. -++.|++||.+.+++
T Consensus 175 ~~~~~ev~~~ir~~l~~~~~~-~~~~~~Il---YGGSV~~~N~~~l~~~---------~~vDG~LVG~Asl~~ 234 (242)
T cd00311 175 PEQAQEVHAFIRKLLAELYGE-VAEKVRIL---YGGSVNPENAAELLAQ---------PDIDGVLVGGASLKA 234 (242)
T ss_pred HHHHHHHHHHHHHHHHHhccc-ccCceeEE---ECCCCCHHHHHHHhcC---------CCCCEEEeehHhhCH
Confidence 45578899999998864 433 23344444 9999999888888764 248899999999875
No 153
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=52.81 E-value=7.3 Score=35.29 Aligned_cols=34 Identities=24% Similarity=0.351 Sum_probs=27.8
Q ss_pred HHHHHCCCCCCCCeEEeccccCCccHHHHHHHHH
Q 018329 167 GWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIH 200 (358)
Q Consensus 167 ~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~ 200 (358)
+|++.+|+...+++-|.|-|.||..+-.+|....
T Consensus 11 ~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~ 44 (213)
T PF08840_consen 11 DWLKSHPEVDPDKIGIIGISKGAELALLLASRFP 44 (213)
T ss_dssp HHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS
T ss_pred HHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC
Confidence 5778999999889999999999999888887653
No 154
>PRK00042 tpiA triosephosphate isomerase; Provisional
Probab=52.53 E-value=38 Score=31.69 Aligned_cols=61 Identities=18% Similarity=0.305 Sum_probs=44.7
Q ss_pred cHHHHHHHHHHHHHHHHH-CCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCCC
Q 018329 154 DQVTANDSYAFLIGWFKR-FPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDP 227 (358)
Q Consensus 154 ~~~~a~~~~~fl~~f~~~-fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~~ 227 (358)
+.+.++++.+|+++++.. +. -....+-|. |||-.-|.=+..+... .++.|++||.+.+++.
T Consensus 178 s~~~~~~v~~~Ir~~l~~~~~-~~~~~~~Il---YGGSV~~~N~~~l~~~---------~~vDG~LVG~Asl~~~ 239 (250)
T PRK00042 178 TPEQAQEVHAFIRAVLAELYG-EVAEKVRIL---YGGSVKPDNAAELMAQ---------PDIDGALVGGASLKAE 239 (250)
T ss_pred CHHHHHHHHHHHHHHHHHhcc-cccCCceEE---EcCCCCHHHHHHHhcC---------CCCCEEEEeeeeechH
Confidence 345688899999998853 33 112334444 9999999999888764 4588999999998764
No 155
>KOG3079 consensus Uridylate kinase/adenylate kinase [Nucleotide transport and metabolism]
Probab=52.33 E-value=8 Score=34.60 Aligned_cols=16 Identities=38% Similarity=0.897 Sum_probs=13.8
Q ss_pred CCCCeEEEECCCCChh
Q 018329 79 SSKPLVLWLNGGPGCS 94 (358)
Q Consensus 79 ~~~pl~lwlnGGPG~S 94 (358)
.+.|-|+|+=|||||-
T Consensus 5 ~~~~~IifVlGGPGsg 20 (195)
T KOG3079|consen 5 LDKPPIIFVLGGPGSG 20 (195)
T ss_pred ccCCCEEEEEcCCCCC
Confidence 3578999999999986
No 156
>KOG3101 consensus Esterase D [General function prediction only]
Probab=52.00 E-value=95 Score=28.68 Aligned_cols=181 Identities=15% Similarity=0.159 Sum_probs=82.4
Q ss_pred eEEEEEEEecCC----CCceEEEE-EEecc-CCCCCCCeEEEECCCCChhhh-----h-h-hhhhhcCCeEEcCCCC---
Q 018329 51 KHYAGYVKLRPN----DHKALFYW-FFEAQ-KGVSSKPLVLWLNGGPGCSSI-----A-Y-GAAQELGPFLVGGNGS--- 114 (358)
Q Consensus 51 ~~ysGyl~v~~~----~~~~lfyw-f~~s~-~~~~~~pl~lwlnGGPG~Ss~-----~-~-g~~~e~GP~~~~~~~~--- 114 (358)
+++-|+..+-.. .+-.|=|- |++.. .+...-|+++||.|= -|.-- . + -.-.+.|=..|.+|..
T Consensus 8 k~f~G~q~vy~H~S~tl~c~Mtf~vylPp~a~~~k~~P~lf~LSGL-TCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG 86 (283)
T KOG3101|consen 8 KCFGGRQKVYKHNSNTLKCSMTFGVYLPPDAPRGKRCPVLFYLSGL-TCTHENFIEKSGFQQQASKHGLAVVAPDTSPRG 86 (283)
T ss_pred ccccceeeeeeccccccccceEEEEecCCCcccCCcCceEEEecCC-cccchhhHhhhhHHHhHhhcCeEEECCCCCCCc
Confidence 455555555431 12245454 44432 122346999999953 33211 0 0 1123455556666531
Q ss_pred -eeecCCCCcccccceeEeecCcccccccccCCCcccccCcHHHHHHHHHHHHHHHH-HCCCCCCCCeEEeccccCCccH
Q 018329 115 -RLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFK-RFPNFKSHDFYIAGESYAGHYV 192 (358)
Q Consensus 115 -~l~~n~~sW~~~an~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~-~fp~~~~~~~yi~GeSYgG~yv 192 (358)
.+.-.+.||. =-.|.||=-..+...+.+ .-..-+.+.+-|-+-+. .+-.+...+.-|+|+|.|||=+
T Consensus 87 ~~v~g~~eswD---------FG~GAGFYvnAt~epw~~--~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGA 155 (283)
T KOG3101|consen 87 VEVAGDDESWD---------FGQGAGFYVNATQEPWAK--HYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGA 155 (283)
T ss_pred cccCCCccccc---------ccCCceeEEecccchHhh--hhhHHHHHHHHHHHHhccccccccchhcceeccccCCCce
Confidence 2333445663 345666654333332221 11111222222221111 2222333458999999999953
Q ss_pred HHHHHHHHHHhhccCCCceeeeeeeEeeccccCCCCCCcchhhhhhhcccCCHHHHHHHHhhc
Q 018329 193 PQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKEC 255 (358)
Q Consensus 193 p~la~~i~~~~~~~~~~~~inLkGi~igng~~d~~~q~~~~~~~~~~~gli~~~~~~~~~~~C 255 (358)
-.++- +|. -..|++---.|..+|..---..--|.-+.|- ++.+|++....|
T Consensus 156 l~~~L----kn~-------~kykSvSAFAPI~NP~~cpWGqKAf~gYLG~-~ka~W~~yDat~ 206 (283)
T KOG3101|consen 156 LTIYL----KNP-------SKYKSVSAFAPICNPINCPWGQKAFTGYLGD-NKAQWEAYDATH 206 (283)
T ss_pred EEEEE----cCc-------ccccceeccccccCcccCcchHHHhhcccCC-ChHHHhhcchHH
Confidence 32221 111 1366777777777775432111112222333 556677665544
No 157
>PLN02761 lipase class 3 family protein
Probab=51.46 E-value=40 Score=34.98 Aligned_cols=71 Identities=13% Similarity=0.074 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHHHHHHCCCC-C--CCCeEEeccccCCccHHHHHHHHHHHhhcc--CCCceeeeeeeEeeccccC
Q 018329 155 QVTANDSYAFLIGWFKRFPNF-K--SHDFYIAGESYAGHYVPQLAELIHERNIRA--GKDSFINLKGFMIGNAVIN 225 (358)
Q Consensus 155 ~~~a~~~~~fl~~f~~~fp~~-~--~~~~yi~GeSYgG~yvp~la~~i~~~~~~~--~~~~~inLkGi~igng~~d 225 (358)
..+.++++..++...+.+|.. + ...++|+|||-||-.+-..|..|.+.+-.. .....+++.-+..|.|-+.
T Consensus 268 ~SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPRVG 343 (527)
T PLN02761 268 FSAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPRVG 343 (527)
T ss_pred hhHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCCcC
Confidence 456778899999988888643 1 235999999999999888888886532110 0112345666677766553
No 158
>PF07849 DUF1641: Protein of unknown function (DUF1641); InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long.
Probab=51.41 E-value=4.8 Score=26.85 Aligned_cols=17 Identities=29% Similarity=0.370 Sum_probs=14.2
Q ss_pred hHhhcCChHHHHHhhCC
Q 018329 329 YVMKFFNREDVQRALHA 345 (358)
Q Consensus 329 ~~~~YLN~pdVqkALhV 345 (358)
-+-.-|++||||++|++
T Consensus 15 gl~~~l~DpdvqrgL~~ 31 (42)
T PF07849_consen 15 GLLRALRDPDVQRGLGF 31 (42)
T ss_pred HHHHHHcCHHHHHHHHH
Confidence 35667999999999986
No 159
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=50.74 E-value=30 Score=35.46 Aligned_cols=88 Identities=19% Similarity=0.215 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCCCCCCcchh
Q 018329 155 QVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLV 234 (358)
Q Consensus 155 ~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~~~q~~~~~ 234 (358)
.+++.--...++.||.+-|++ -|..|.|=||+=.-..|++.-+. +.||+.|.|.++.........
T Consensus 96 h~~~~~aK~l~~~~Yg~~p~~----sY~~GcS~GGRqgl~~AQryP~d-----------fDGIlAgaPA~~~~~~~~~~~ 160 (474)
T PF07519_consen 96 HETTVVAKALIEAFYGKAPKY----SYFSGCSTGGRQGLMAAQRYPED-----------FDGILAGAPAINWTHLQLAHA 160 (474)
T ss_pred HHHHHHHHHHHHHHhCCCCCc----eEEEEeCCCcchHHHHHHhChhh-----------cCeEEeCCchHHHHHHHHHhh
Confidence 334444456678899887755 79999999999888888777654 889999999998754322111
Q ss_pred h---hhh--hcccCCHHHHHHH----HhhccC
Q 018329 235 D---YAW--SHAIISDKLYKDI----SKECDF 257 (358)
Q Consensus 235 ~---~~~--~~gli~~~~~~~~----~~~C~~ 257 (358)
. ... ....++..+++.+ .++|..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~i~~avl~~CD~ 192 (474)
T PF07519_consen 161 WPAQVMYPDPGGYLSPCKLDLIHAAVLAACDA 192 (474)
T ss_pred hhhhhhccCCCCCCCHHHHHHHHHHHHHhccc
Confidence 1 111 1346666666554 346753
No 160
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=50.52 E-value=86 Score=32.76 Aligned_cols=84 Identities=10% Similarity=-0.009 Sum_probs=49.7
Q ss_pred ceeEeecCcccccccccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccC
Q 018329 128 NMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAG 207 (358)
Q Consensus 128 n~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~ 207 (358)
.++-||= .|-|.|..... -++-+.+.+.++|..+.+.. ...+++++|+|-||..+...+........
T Consensus 222 ~V~~iDw-rgpg~s~~~~~------~ddY~~~~i~~al~~v~~~~---g~~kv~lvG~cmGGtl~a~ala~~aa~~~--- 288 (532)
T TIGR01838 222 TVFVISW-RNPDASQADKT------FDDYIRDGVIAALEVVEAIT---GEKQVNCVGYCIGGTLLSTALAYLAARGD--- 288 (532)
T ss_pred EEEEEEC-CCCCcccccCC------hhhhHHHHHHHHHHHHHHhc---CCCCeEEEEECcCcHHHHHHHHHHHHhCC---
Confidence 5666774 46666632111 12223344666666655543 35689999999999987664333332210
Q ss_pred CCceeeeeeeEeeccccCCC
Q 018329 208 KDSFINLKGFMIGNAVINDP 227 (358)
Q Consensus 208 ~~~~inLkGi~igng~~d~~ 227 (358)
.-.++++++.+..+|..
T Consensus 289 ---~~rv~slvll~t~~Df~ 305 (532)
T TIGR01838 289 ---DKRIKSATFFTTLLDFS 305 (532)
T ss_pred ---CCccceEEEEecCcCCC
Confidence 11378888888888865
No 161
>PRK04940 hypothetical protein; Provisional
Probab=50.33 E-value=17 Score=32.40 Aligned_cols=37 Identities=16% Similarity=0.217 Sum_probs=29.3
Q ss_pred CCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCCCC
Q 018329 178 HDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPT 228 (358)
Q Consensus 178 ~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~~~ 228 (358)
.++.|+|.|-||.|+-.||.+- .++. ++.||.+.|..
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~-------------g~~a-VLiNPAv~P~~ 96 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLC-------------GIRQ-VIFNPNLFPEE 96 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHH-------------CCCE-EEECCCCChHH
Confidence 4799999999999999888753 2433 67799999964
No 162
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=50.16 E-value=28 Score=33.94 Aligned_cols=59 Identities=15% Similarity=0.251 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeecccc
Q 018329 159 NDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVI 224 (358)
Q Consensus 159 ~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~ 224 (358)
..+.+-++.-...+| +..++++|||=||-.+...|..|...... ....++-+-.|-|-+
T Consensus 155 ~~~~~~~~~L~~~~~---~~~i~vTGHSLGgAlA~laa~~i~~~~~~----~~~~v~v~tFG~PRv 213 (336)
T KOG4569|consen 155 SGLDAELRRLIELYP---NYSIWVTGHSLGGALASLAALDLVKNGLK----TSSPVKVYTFGQPRV 213 (336)
T ss_pred HHHHHHHHHHHHhcC---CcEEEEecCChHHHHHHHHHHHHHHcCCC----CCCceEEEEecCCCc
Confidence 344455555556788 44799999999999999999999875422 124455555565543
No 163
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=47.68 E-value=29 Score=33.87 Aligned_cols=121 Identities=22% Similarity=0.292 Sum_probs=65.8
Q ss_pred CceEEEEEEeccCCCCCCCeEEEECCCCChhhhhh-----hhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCccc
Q 018329 64 HKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAY-----GAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGV 138 (358)
Q Consensus 64 ~~~lfywf~~s~~~~~~~pl~lwlnGGPG~Ss~~~-----g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~ 138 (358)
+--.+.|.-.. .....|+||-++|=-|.|.-.| ..+.+-| | .++-.+ --|-
T Consensus 60 ~~~~ldw~~~p--~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg-~--------------------~~Vv~~-~Rgc 115 (345)
T COG0429 60 GFIDLDWSEDP--RAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRG-W--------------------LVVVFH-FRGC 115 (345)
T ss_pred CEEEEeeccCc--cccCCceEEEEeccCCCCcCHHHHHHHHHHHhcC-C--------------------eEEEEe-cccc
Confidence 34566774321 2334599999999666653211 2333333 2 233333 2243
Q ss_pred ccccccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeE
Q 018329 139 GFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFM 218 (358)
Q Consensus 139 GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~ 218 (358)
|.+-.....-|.. ++. +|+..|+..--+++| .+++|.+|-|.||.. +|..+.++.+. .....+++
T Consensus 116 s~~~n~~p~~yh~-G~t---~D~~~~l~~l~~~~~---~r~~~avG~SLGgnm---La~ylgeeg~d-----~~~~aa~~ 180 (345)
T COG0429 116 SGEANTSPRLYHS-GET---EDIRFFLDWLKARFP---PRPLYAVGFSLGGNM---LANYLGEEGDD-----LPLDAAVA 180 (345)
T ss_pred cCCcccCcceecc-cch---hHHHHHHHHHHHhCC---CCceEEEEecccHHH---HHHHHHhhccC-----cccceeee
Confidence 3332211222222 343 455555554445677 789999999999953 67777665322 23367777
Q ss_pred eeccc
Q 018329 219 IGNAV 223 (358)
Q Consensus 219 igng~ 223 (358)
+-+|+
T Consensus 181 vs~P~ 185 (345)
T COG0429 181 VSAPF 185 (345)
T ss_pred eeCHH
Confidence 77776
No 164
>PLN03037 lipase class 3 family protein; Provisional
Probab=47.09 E-value=39 Score=35.04 Aligned_cols=46 Identities=13% Similarity=0.062 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHCCCC-CCCCeEEeccccCCccHHHHHHHHHHH
Q 018329 157 TANDSYAFLIGWFKRFPNF-KSHDFYIAGESYAGHYVPQLAELIHER 202 (358)
Q Consensus 157 ~a~~~~~fl~~f~~~fp~~-~~~~~yi~GeSYgG~yvp~la~~i~~~ 202 (358)
+.+++..-++...+.+++. ....++|+|||-||-.+-..|..|.+.
T Consensus 296 areQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~ 342 (525)
T PLN03037 296 ASEQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAARS 342 (525)
T ss_pred hHHHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHHh
Confidence 4456777777777777753 234699999999999887777777654
No 165
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=46.78 E-value=48 Score=32.76 Aligned_cols=61 Identities=21% Similarity=0.288 Sum_probs=41.4
Q ss_pred cccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCC
Q 018329 148 DLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVIND 226 (358)
Q Consensus 148 ~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~ 226 (358)
.|.. ++..+++...+|-..-+ .|+..++.|.|-|-||.-+...|.- ..++|++++- .-.|.
T Consensus 286 P~p~-n~~nA~DaVvQfAI~~L----gf~~edIilygWSIGGF~~~waAs~------------YPdVkavvLD-AtFDD 346 (517)
T KOG1553|consen 286 PYPV-NTLNAADAVVQFAIQVL----GFRQEDIILYGWSIGGFPVAWAASN------------YPDVKAVVLD-ATFDD 346 (517)
T ss_pred CCcc-cchHHHHHHHHHHHHHc----CCCccceEEEEeecCCchHHHHhhc------------CCCceEEEee-cchhh
Confidence 4555 67777777776665422 3557799999999999988777642 3568887664 44443
No 166
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=46.73 E-value=55 Score=30.77 Aligned_cols=59 Identities=15% Similarity=0.059 Sum_probs=44.1
Q ss_pred CcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccC
Q 018329 153 GDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVIN 225 (358)
Q Consensus 153 ~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d 225 (358)
+.++.|+.-.+.|+ +..|+- |.+|.|.|+||.-+=.+|.++..+-.+ ..-++|.+....
T Consensus 46 ~l~~~a~~yv~~Ir---~~QP~G---Py~L~G~S~GG~vA~evA~qL~~~G~~--------Va~L~llD~~~~ 104 (257)
T COG3319 46 SLDDMAAAYVAAIR---RVQPEG---PYVLLGWSLGGAVAFEVAAQLEAQGEE--------VAFLGLLDAVPP 104 (257)
T ss_pred CHHHHHHHHHHHHH---HhCCCC---CEEEEeeccccHHHHHHHHHHHhCCCe--------EEEEEEeccCCC
Confidence 56667777777776 578844 999999999999999999999876432 455666666555
No 167
>PRK14565 triosephosphate isomerase; Provisional
Probab=45.52 E-value=38 Score=31.50 Aligned_cols=55 Identities=13% Similarity=0.224 Sum_probs=41.8
Q ss_pred CcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCCC
Q 018329 153 GDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDP 227 (358)
Q Consensus 153 ~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~~ 227 (358)
-+.+.+++...+++++. .++-|. |||-.-|.-+..+.+. -++.|++||.+.+++.
T Consensus 171 a~~e~i~~~~~~Ir~~~--------~~~~Il---YGGSV~~~N~~~l~~~---------~~iDG~LvG~asl~~~ 225 (237)
T PRK14565 171 PSNDAIAEAFEIIRSYD--------SKSHII---YGGSVNQENIRDLKSI---------NQLSGVLVGSASLDVD 225 (237)
T ss_pred CCHHHHHHHHHHHHHhC--------CCceEE---EcCccCHhhHHHHhcC---------CCCCEEEEechhhcHH
Confidence 34566888999998862 133333 9999999999998863 3489999999998764
No 168
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=44.59 E-value=93 Score=31.47 Aligned_cols=88 Identities=22% Similarity=0.240 Sum_probs=57.4
Q ss_pred CCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCcccccccccCCCcccccCcHHH
Q 018329 78 VSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVT 157 (358)
Q Consensus 78 ~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfSy~~~~~~~~~~~~~~~ 157 (358)
..++|+||..+| |++.. .|.+-.. +=.=.+|.|+||... -|=|.- ...|+..++..++
T Consensus 60 ~~drPtV~~T~G--------Y~~~~--~p~r~Ep----------t~Lld~NQl~vEhRf-F~~SrP-~p~DW~~Lti~QA 117 (448)
T PF05576_consen 60 DFDRPTVLYTEG--------YNVST--SPRRSEP----------TQLLDGNQLSVEHRF-FGPSRP-EPADWSYLTIWQA 117 (448)
T ss_pred CCCCCeEEEecC--------ccccc--Cccccch----------hHhhccceEEEEEee-ccCCCC-CCCCcccccHhHh
Confidence 346799998886 44422 2333211 111247899999663 222332 2345656688999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEeccccCCcc
Q 018329 158 ANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHY 191 (358)
Q Consensus 158 a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~y 191 (358)
|.|.++..+.|=..+| + ++.-+|-|=||+-
T Consensus 118 A~D~Hri~~A~K~iY~---~-kWISTG~SKGGmT 147 (448)
T PF05576_consen 118 ASDQHRIVQAFKPIYP---G-KWISTGGSKGGMT 147 (448)
T ss_pred hHHHHHHHHHHHhhcc---C-CceecCcCCCcee
Confidence 9999999998855565 3 5888999999985
No 169
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=43.84 E-value=47 Score=31.06 Aligned_cols=65 Identities=23% Similarity=0.296 Sum_probs=35.3
Q ss_pred ceeEeecCcccccccccCCCcccccC-cHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHH
Q 018329 128 NMLFLEAPVGVGFSYTNNSEDLHKLG-DQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAE 197 (358)
Q Consensus 128 n~l~iDqP~G~GfSy~~~~~~~~~~~-~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~ 197 (358)
.||-.|-. |+|=|.....+.... . -+=+-.|+-..|..-=++-| ..|.|..|+||||+-.-.+++
T Consensus 59 ~Vlt~dyR-G~g~S~p~~~~~~~~-~~~DwA~~D~~aal~~~~~~~~---~~P~y~vgHS~GGqa~gL~~~ 124 (281)
T COG4757 59 EVLTFDYR-GIGQSRPASLSGSQW-RYLDWARLDFPAALAALKKALP---GHPLYFVGHSFGGQALGLLGQ 124 (281)
T ss_pred eEEEEecc-cccCCCccccccCcc-chhhhhhcchHHHHHHHHhhCC---CCceEEeeccccceeeccccc
Confidence 45666643 777775433321111 1 11123344444443223334 568999999999998665554
No 170
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=43.20 E-value=35 Score=31.20 Aligned_cols=102 Identities=19% Similarity=0.135 Sum_probs=61.1
Q ss_pred CceEEEEEEeccCCCCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCcccccccc
Q 018329 64 HKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYT 143 (358)
Q Consensus 64 ~~~lfywf~~s~~~~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfSy~ 143 (358)
+.++.|-=+-+ -+--||-+-|-=||+-.|++.=.+ +- ++ - ....|+-+| |.|.|-|..
T Consensus 30 g~ql~y~~~G~-----G~~~iLlipGalGs~~tDf~pql~------~l-------~k--~-l~~TivawD-PpGYG~SrP 87 (277)
T KOG2984|consen 30 GTQLGYCKYGH-----GPNYILLIPGALGSYKTDFPPQLL------SL-------FK--P-LQVTIVAWD-PPGYGTSRP 87 (277)
T ss_pred CceeeeeecCC-----CCceeEecccccccccccCCHHHH------hc-------CC--C-CceEEEEEC-CCCCCCCCC
Confidence 45666652211 234678889988888887432211 10 11 0 015789999 779999975
Q ss_pred cCCC---cccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHH
Q 018329 144 NNSE---DLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAEL 198 (358)
Q Consensus 144 ~~~~---~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~ 198 (358)
.... ++.. -|.+.|-|+.++|+ -.+|-|.|-|=||.-.-..|.+
T Consensus 88 P~Rkf~~~ff~-~Da~~avdLM~aLk----------~~~fsvlGWSdGgiTalivAak 134 (277)
T KOG2984|consen 88 PERKFEVQFFM-KDAEYAVDLMEALK----------LEPFSVLGWSDGGITALIVAAK 134 (277)
T ss_pred CcccchHHHHH-HhHHHHHHHHHHhC----------CCCeeEeeecCCCeEEEEeecc
Confidence 4322 1222 35566666666653 3479999999999876555543
No 171
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=41.62 E-value=19 Score=24.12 Aligned_cols=33 Identities=15% Similarity=0.221 Sum_probs=25.0
Q ss_pred ccccCCCCCCcchhhhhhhcccCCHHHHHHHHh
Q 018329 221 NAVINDPTDTKGLVDYAWSHAIISDKLYKDISK 253 (358)
Q Consensus 221 ng~~d~~~q~~~~~~~~~~~gli~~~~~~~~~~ 253 (358)
.|.+||..-..--.+-|...|+|+.+.+..+.+
T Consensus 11 gGiidp~tg~~lsv~~A~~~glId~~~~~~L~e 43 (45)
T PF00681_consen 11 GGIIDPETGERLSVEEAIQRGLIDSDTAQKLLE 43 (45)
T ss_dssp TSEEETTTTEEEEHHHHHHTTSS-HHHHHHHHH
T ss_pred eeEEeCCCCeEEcHHHHHHCCCcCHHHHHHHHc
Confidence 477888876665667789999999998887754
No 172
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=40.19 E-value=58 Score=29.42 Aligned_cols=55 Identities=13% Similarity=0.091 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCCC
Q 018329 158 ANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDP 227 (358)
Q Consensus 158 a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~~ 227 (358)
.+++..+|+. +|+-...+ ..|+|.|.||.-+-.+|.+ +.+. +.+++..+|.+++.
T Consensus 99 ~~el~p~i~~---~~~~~~~~-~~i~G~S~GG~~Al~~~l~---~Pd~--------F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 99 TEELIPYIEA---NYRTDPDR-RAIAGHSMGGYGALYLALR---HPDL--------FGAVIAFSGALDPS 153 (251)
T ss_dssp HTHHHHHHHH---HSSEEECC-EEEEEETHHHHHHHHHHHH---STTT--------ESEEEEESEESETT
T ss_pred hccchhHHHH---hcccccce-eEEeccCCCcHHHHHHHHh---Cccc--------cccccccCcccccc
Confidence 3344444443 45434343 8999999999876665543 2221 88999999988876
No 173
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=39.59 E-value=52 Score=31.30 Aligned_cols=91 Identities=19% Similarity=0.289 Sum_probs=50.7
Q ss_pred CCCCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCcccccccccCC--CcccccCcH
Q 018329 78 VSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNS--EDLHKLGDQ 155 (358)
Q Consensus 78 ~~~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfSy~~~~--~~~~~~~~~ 155 (358)
++..|+|+|=-=|-.||+..++.|.| +..| + |-..||+-.-.. .+.......
T Consensus 21 ~s~~P~ii~HGigd~c~~~~~~~~~q------------~l~~-~-------------~g~~v~~leig~g~~~s~l~pl~ 74 (296)
T KOG2541|consen 21 PSPVPVIVWHGIGDSCSSLSMANLTQ------------LLEE-L-------------PGSPVYCLEIGDGIKDSSLMPLW 74 (296)
T ss_pred cccCCEEEEeccCcccccchHHHHHH------------HHHh-C-------------CCCeeEEEEecCCcchhhhccHH
Confidence 34489999977799999854566664 1111 1 223333321111 111111344
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHH
Q 018329 156 VTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELI 199 (358)
Q Consensus 156 ~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i 199 (358)
++++.+-+.+. .-|++ ++-.+|.|.|-||...=++++..
T Consensus 75 ~Qv~~~ce~v~----~m~~l-sqGynivg~SQGglv~Raliq~c 113 (296)
T KOG2541|consen 75 EQVDVACEKVK----QMPEL-SQGYNIVGYSQGGLVARALIQFC 113 (296)
T ss_pred HHHHHHHHHHh----cchhc-cCceEEEEEccccHHHHHHHHhC
Confidence 44544444443 45666 45799999999998655555544
No 174
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=38.54 E-value=60 Score=32.27 Aligned_cols=41 Identities=7% Similarity=0.054 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHH
Q 018329 156 VTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIH 200 (358)
Q Consensus 156 ~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~ 200 (358)
+.+..+...++.-++.. ++++.|+|||.||.++-.+-....
T Consensus 101 ~~~~~lk~~ie~~~~~~----~~kv~li~HSmGgl~~~~fl~~~~ 141 (389)
T PF02450_consen 101 EYFTKLKQLIEEAYKKN----GKKVVLIAHSMGGLVARYFLQWMP 141 (389)
T ss_pred HHHHHHHHHHHHHHHhc----CCcEEEEEeCCCchHHHHHHHhcc
Confidence 34455555555544432 679999999999998877766653
No 175
>PF04414 tRNA_deacylase: D-aminoacyl-tRNA deacylase; InterPro: IPR007508 D-aminoacyl-tRNA deacylases hydrolyse the ester bond between the polynucleotide and the D-amino acid, thereby preventing the accumulation of such mis-acylated and metabolically inactive tRNA molecules. Several aminoacyl-tRNA synthetases have the ability to transfer the D-isomer of their amino acid onto their cognate tRNA. ; GO: 0016788 hydrolase activity, acting on ester bonds; PDB: 1YQE_A 2GFQ_B.
Probab=37.94 E-value=79 Score=28.91 Aligned_cols=47 Identities=19% Similarity=0.214 Sum_probs=32.9
Q ss_pred CcHHHHHHHHHHHHHHHHHCCCCCC-CCeEEeccccCCccHHHHHHHHHHH
Q 018329 153 GDQVTANDSYAFLIGWFKRFPNFKS-HDFYIAGESYAGHYVPQLAELIHER 202 (358)
Q Consensus 153 ~~~~~a~~~~~fl~~f~~~fp~~~~-~~~yi~GeSYgG~yvp~la~~i~~~ 202 (358)
+|..+++.+.+.+.+.+..-++-.. ..+.-+| ||||.|.+.+.+++.
T Consensus 105 ~d~~a~~~vA~avl~~~~~~~~~~~~~~~ig~G---G~HYapr~t~~~l~~ 152 (213)
T PF04414_consen 105 NDPDAAEAVARAVLEVLESDEKAECCPVAIGFG---GGHYAPRFTKLALET 152 (213)
T ss_dssp T-HHHHHHHHHHHHHHHHHTTCSTT-EEEEEE----S-TT-HHHHHHHHHC
T ss_pred CChHHHHHHHHHHHHHhcccccccccceeEEec---CcccchhhhhhhhcC
Confidence 7899999999999998887664432 3455565 899999999988864
No 176
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=37.28 E-value=48 Score=36.14 Aligned_cols=93 Identities=17% Similarity=0.227 Sum_probs=52.9
Q ss_pred eEEEECCCCChh-------hhhhhhhhhcCCeEEcCCCCeeecCCCCcccccceeEeecCcccccccccCCCcccccCcH
Q 018329 83 LVLWLNGGPGCS-------SIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQ 155 (358)
Q Consensus 83 l~lwlnGGPG~S-------s~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~an~l~iDqP~G~GfSy~~~~~~~~~~~~~ 155 (358)
-||++-|--|+- |. ..+-...||++=..+ .+||++. +-.-+| ..=-||-- .-. ...
T Consensus 91 PVLFIPGNAGSyKQvRSiAS~-a~n~y~~~~~e~t~~----~d~~~~~----DFFaVD--FnEe~tAm-----~G~-~l~ 153 (973)
T KOG3724|consen 91 PVLFIPGNAGSYKQVRSIASV-AQNAYQGGPFEKTED----RDNPFSF----DFFAVD--FNEEFTAM-----HGH-ILL 153 (973)
T ss_pred eEEEecCCCCchHHHHHHHHH-HhhhhcCCchhhhhc----ccCcccc----ceEEEc--ccchhhhh-----ccH-hHH
Confidence 367898877752 33 245566899984333 2466665 222233 00011100 011 455
Q ss_pred HHHHHHHHHHHHHH---HHCCCCC---CCCeEEeccccCCccH
Q 018329 156 VTANDSYAFLIGWF---KRFPNFK---SHDFYIAGESYAGHYV 192 (358)
Q Consensus 156 ~~a~~~~~fl~~f~---~~fp~~~---~~~~yi~GeSYgG~yv 192 (358)
++++.+.++++.-+ +.-+||+ ...+.|.|||+||..+
T Consensus 154 dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVA 196 (973)
T KOG3724|consen 154 DQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVA 196 (973)
T ss_pred HHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHH
Confidence 67777777766554 4445566 5569999999999753
No 177
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=37.13 E-value=90 Score=29.66 Aligned_cols=66 Identities=17% Similarity=0.071 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHHHCCC--C-CCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceee--eeeeEeeccccCC
Q 018329 155 QVTANDSYAFLIGWFKRFPN--F-KSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFIN--LKGFMIGNAVIND 226 (358)
Q Consensus 155 ~~~a~~~~~fl~~f~~~fp~--~-~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~in--LkGi~igng~~d~ 226 (358)
...|..+++.++.-.+..+. + .+.++.|+|.|=||+=.- .|..+.. .- .+.++ |+|.+.|.+..|.
T Consensus 45 ~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~-~AA~l~~-~Y----ApeL~~~l~Gaa~gg~~~dl 115 (290)
T PF03583_consen 45 RSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAAL-WAAELAP-SY----APELNRDLVGAAAGGPPADL 115 (290)
T ss_pred HhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHH-HHHHHhH-Hh----CcccccceeEEeccCCccCH
Confidence 34455555555543333332 2 356899999999988542 3333322 11 24688 9999999987775
No 178
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=37.02 E-value=50 Score=31.13 Aligned_cols=64 Identities=16% Similarity=0.245 Sum_probs=38.3
Q ss_pred CcHHHHHHHHHHHHHHHH-HC-----CCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeecccc
Q 018329 153 GDQVTANDSYAFLIGWFK-RF-----PNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVI 224 (358)
Q Consensus 153 ~~~~~a~~~~~fl~~f~~-~f-----p~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~ 224 (358)
.+.+.+.++.++|.+=++ .. |++. ++.|+|||=||+-+-.++... .. ....+++++++..+|.=
T Consensus 62 ~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s--~l~l~GHSrGGk~Af~~al~~----~~--~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 62 DEVASAAEVIDWLAKGLESKLPLGVKPDFS--KLALAGHSRGGKVAFAMALGN----AS--SSLDLRFSALILLDPVD 131 (259)
T ss_pred hhHHHHHHHHHHHHhcchhhcccccccccc--ceEEeeeCCCCHHHHHHHhhh----cc--cccccceeEEEEecccc
Confidence 445556666666654111 22 2332 599999999999443333322 11 11247899999998875
No 179
>PRK09504 sufA iron-sulfur cluster assembly scaffold protein; Provisional
Probab=36.94 E-value=40 Score=27.83 Aligned_cols=64 Identities=16% Similarity=0.296 Sum_probs=39.3
Q ss_pred CCeEEEECCCCChhhhhhhh--hhhcCC--eEEcCCCCeeecCCCC--cccccceeEeecCcccccccccC
Q 018329 81 KPLVLWLNGGPGCSSIAYGA--AQELGP--FLVGGNGSRLKFNKYS--WNKAANMLFLEAPVGVGFSYTNN 145 (358)
Q Consensus 81 ~pl~lwlnGGPG~Ss~~~g~--~~e~GP--~~~~~~~~~l~~n~~s--W~~~an~l~iDqP~G~GfSy~~~ 145 (358)
..|=|-+.|| |||++.|++ ..|..| ..+..++-++...+.+ +-+-+.|=|+|...|.||-+.+.
T Consensus 39 ~~LRi~v~~g-GCsG~~Y~~~l~~e~~~~D~v~e~~g~~v~Id~~s~~~L~g~~IDy~~~~~~~gF~f~NP 108 (122)
T PRK09504 39 KGVRLGVKQT-GCAGFGYVLDSVSEPDKDDLVFEHDGAKLFVPLQAMPFIDGTEVDYVREGLNQIFKFHNP 108 (122)
T ss_pred ceEEEEEECC-CCCceEEEeeecCCCCCCCEEEEeCCEEEEEcHHHHHhhCCcEEEeecCCCcceEEEECC
Confidence 3577777755 999875544 244444 2334444444444433 55667788889999999987543
No 180
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=36.85 E-value=2.8e+02 Score=26.27 Aligned_cols=55 Identities=15% Similarity=0.173 Sum_probs=32.2
Q ss_pred HHHHHHHHHH----HHHH-CCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeecccc
Q 018329 158 ANDSYAFLIG----WFKR-FPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVI 224 (358)
Q Consensus 158 a~~~~~fl~~----f~~~-fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~ 224 (358)
|+.+.+||.+ |.+. ++ ..+.+--|+||||||.++-. .++++... +.-+.+++|-+
T Consensus 113 ~~~f~~fL~~~lkP~Ie~~y~-~~~~~~~i~GhSlGGLfvl~---aLL~~p~~--------F~~y~~~SPSl 172 (264)
T COG2819 113 GDAFREFLTEQLKPFIEARYR-TNSERTAIIGHSLGGLFVLF---ALLTYPDC--------FGRYGLISPSL 172 (264)
T ss_pred hHHHHHHHHHhhHHHHhcccc-cCcccceeeeecchhHHHHH---HHhcCcch--------hceeeeecchh
Confidence 4455566544 5544 33 23445899999999997643 35554222 55556666544
No 181
>TIGR01911 HesB_rel_seleno HesB-like selenoprotein. This model represents a family of small proteins related to HesB and its close homologs, which are likely to be invovlved in iron-sulfur cluster assembly (See TIGR00049 and pfam01521). Several members are selenoproteins, with a TGA codon and Sec residue that aligns to the conserved Cys of the HesB domain. A variable Cys/Ser/Gly-rich C-terminal region is not included in the seed alignment and model.
Probab=36.80 E-value=37 Score=26.54 Aligned_cols=17 Identities=18% Similarity=0.505 Sum_probs=13.7
Q ss_pred eEEEECCCCChhhhhhhh
Q 018329 83 LVLWLNGGPGCSSIAYGA 100 (358)
Q Consensus 83 l~lwlnGGPG~Ss~~~g~ 100 (358)
|=|-+.|| |||++.|++
T Consensus 28 LRi~v~~g-GCsG~~Y~~ 44 (92)
T TIGR01911 28 IRIHFAGM-GCMGPMFNL 44 (92)
T ss_pred EEEEEeCC-CccCcccce
Confidence 77888988 999986554
No 182
>PRK09502 iscA iron-sulfur cluster assembly protein; Provisional
Probab=35.34 E-value=45 Score=26.68 Aligned_cols=63 Identities=24% Similarity=0.449 Sum_probs=37.6
Q ss_pred CeEEEECCCCChhhhhhhhh--hhcCC--eEEcCCCCeeecCCC--CcccccceeEeecCcccccccccC
Q 018329 82 PLVLWLNGGPGCSSIAYGAA--QELGP--FLVGGNGSRLKFNKY--SWNKAANMLFLEAPVGVGFSYTNN 145 (358)
Q Consensus 82 pl~lwlnGGPG~Ss~~~g~~--~e~GP--~~~~~~~~~l~~n~~--sW~~~an~l~iDqP~G~GfSy~~~ 145 (358)
.|=|.+. +.|||++.|.+- .|..+ ..+..++-++...+. .+-+-+.|=|+|.+.|.||...+.
T Consensus 25 ~LRi~v~-~~GCsG~~Y~l~~~~~~~~~D~~~~~~g~~v~id~~s~~~l~g~~IDy~~~~~~~~F~f~NP 93 (107)
T PRK09502 25 GLRLGVR-TSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNP 93 (107)
T ss_pred eEEEEEE-CCCcCCeeeEeeecCCCCCCCEEEEcCCeEEEEeHHHHhHhCCCEEEEeeCCCCceEEEECC
Confidence 3555555 448888644442 34333 233334444444443 366777889999999999987543
No 183
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=35.18 E-value=19 Score=35.76 Aligned_cols=38 Identities=16% Similarity=0.149 Sum_probs=22.5
Q ss_pred CeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCCCC
Q 018329 179 DFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPT 228 (358)
Q Consensus 179 ~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~~~ 228 (358)
.+-++||||||--+-..+. +. ..+|..++.+||+-|..
T Consensus 229 ~i~~~GHSFGGATa~~~l~---~d---------~r~~~~I~LD~W~~Pl~ 266 (379)
T PF03403_consen 229 RIGLAGHSFGGATALQALR---QD---------TRFKAGILLDPWMFPLG 266 (379)
T ss_dssp EEEEEEETHHHHHHHHHHH---H----------TT--EEEEES---TTS-
T ss_pred heeeeecCchHHHHHHHHh---hc---------cCcceEEEeCCcccCCC
Confidence 5899999999976553332 11 22788899999998854
No 184
>PRK11190 Fe/S biogenesis protein NfuA; Provisional
Probab=34.21 E-value=72 Score=28.61 Aligned_cols=63 Identities=13% Similarity=0.241 Sum_probs=39.4
Q ss_pred eEEEECCCCChhhhhhhhhh----hc--CCeEEcCCCCeeecCCCC--cccccceeEeecCcccccccccCC
Q 018329 83 LVLWLNGGPGCSSIAYGAAQ----EL--GPFLVGGNGSRLKFNKYS--WNKAANMLFLEAPVGVGFSYTNNS 146 (358)
Q Consensus 83 l~lwlnGGPG~Ss~~~g~~~----e~--GP~~~~~~~~~l~~n~~s--W~~~an~l~iDqP~G~GfSy~~~~ 146 (358)
|=|-+.| .|||++.|++-. |. +=..+..++-++.-.+.| +-+-+-|=|+|...|.||.+.+..
T Consensus 25 LRI~V~~-gGCsG~~Y~~~~~~~~~~~~~D~v~e~~gv~v~Vd~~S~~~L~G~~IDyve~~~g~gF~f~NPN 95 (192)
T PRK11190 25 IRVFVIN-PGTPNAECGVSYCPPDAVEATDTELKFDGFSAYVDELSAPFLEDAEIDFVTDQLGSQLTLKAPN 95 (192)
T ss_pred EEEEEEC-CCcCCceeeeEEeecCCCCCCCEEEEeCCEEEEECcchHhHhCCCEEEEeecCCCCceEEECCC
Confidence 4444554 489976554422 11 113344445556555555 666778899999999999997644
No 185
>PRK13962 bifunctional phosphoglycerate kinase/triosephosphate isomerase; Provisional
Probab=33.93 E-value=70 Score=34.23 Aligned_cols=62 Identities=16% Similarity=0.259 Sum_probs=45.7
Q ss_pred cHHHHHHHHHHHHHHHHH-CCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCCC
Q 018329 154 DQVTANDSYAFLIGWFKR-FPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDP 227 (358)
Q Consensus 154 ~~~~a~~~~~fl~~f~~~-fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~~ 227 (358)
+.+.|++...||++++.. |-+-....+=|. |||---|.-+..|... -++.|++||...+++.
T Consensus 573 t~e~aqevh~~IR~~l~~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~---------~diDG~LVGgASL~~~ 635 (645)
T PRK13962 573 TPEQAQEVHAFIRKLVAELYGEEAARKVRIL---YGGSVKSENAAGLFNQ---------PDIDGGLVGGASLKAQ 635 (645)
T ss_pred CHHHHHHHHHHHHHHHHHHhChhhhccceEE---ecCCCCHhHHHHHhcC---------CCCCeEEeehHhcCHH
Confidence 456789999999999853 322212233333 9999999999999864 3488999999988764
No 186
>PF12532 DUF3732: Protein of unknown function (DUF3732); InterPro: IPR022205 This domain family is found in bacteria and eukaryotes, and is typically between 180 and 198 amino acids in length. There is a conserved DQP sequence motif.
Probab=32.25 E-value=68 Score=28.76 Aligned_cols=61 Identities=20% Similarity=0.411 Sum_probs=36.9
Q ss_pred ccceeEeecCcccccccccCCC-----cc-cccCcHHHHHHHHHHHHHHHHHCC-CCCCCCeEEecccc
Q 018329 126 AANMLFLEAPVGVGFSYTNNSE-----DL-HKLGDQVTANDSYAFLIGWFKRFP-NFKSHDFYIAGESY 187 (358)
Q Consensus 126 ~an~l~iDqP~G~GfSy~~~~~-----~~-~~~~~~~~a~~~~~fl~~f~~~fp-~~~~~~~yi~GeSY 187 (358)
+.++|+||||..|=|.-..... .. ...+|..+.+.++.+|..|.++-- ++ .-.+.|+=|.+
T Consensus 100 VP~fL~lDQPSQvYfp~~~~~~~~~~~~~~~~d~D~~aV~~~F~~L~~~~~~~~~~~-~~QiIV~eHAd 167 (193)
T PF12532_consen 100 VPSFLFLDQPSQVYFPSRDKSEDFDEEELRERDEDIAAVRKMFSLLADFIKEIEKEY-GFQIIVLEHAD 167 (193)
T ss_pred CCCeeeecCCCcCcCCCcccccccchhhccccchHHHHHHHHHHHHHHHHHHhcccc-CccEEEEeccc
Confidence 4599999999998887611111 11 011566677788899999887643 22 22455554443
No 187
>PF09292 Neil1-DNA_bind: Endonuclease VIII-like 1, DNA bind; InterPro: IPR015371 This domain is predominantly found in Endonuclease VIII-like 1 proteins and adopts a glucocorticoid receptor-like fold. Structural analysis reveals a zincless finger motif that is required for glycosylase activity []. ; PDB: 1TDH_A.
Probab=32.07 E-value=28 Score=22.65 Aligned_cols=12 Identities=33% Similarity=1.043 Sum_probs=6.4
Q ss_pred CCeEEEECCCCC
Q 018329 81 KPLVLWLNGGPG 92 (358)
Q Consensus 81 ~pl~lwlnGGPG 92 (358)
.-=+||++|-||
T Consensus 24 ~gRTiWFqGdPG 35 (39)
T PF09292_consen 24 NGRTIWFQGDPG 35 (39)
T ss_dssp TS-EEEESS---
T ss_pred CCCEEEeeCCCC
Confidence 345799999887
No 188
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=32.01 E-value=3e+02 Score=28.24 Aligned_cols=34 Identities=15% Similarity=0.140 Sum_probs=23.5
Q ss_pred HHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHH
Q 018329 162 YAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLA 196 (358)
Q Consensus 162 ~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la 196 (358)
++++++....|- =..+++-|+|+|.||..|-.+.
T Consensus 180 L~wv~~~I~~FG-Gdp~~vTl~G~saGa~~v~~l~ 213 (545)
T KOG1516|consen 180 LRWVKDNIPSFG-GDPKNVTLFGHSAGAASVSLLT 213 (545)
T ss_pred HHHHHHHHHhcC-CCCCeEEEEeechhHHHHHHHh
Confidence 455565555554 2345699999999999885544
No 189
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=31.63 E-value=66 Score=31.85 Aligned_cols=48 Identities=13% Similarity=0.132 Sum_probs=33.3
Q ss_pred CCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCCC
Q 018329 177 SHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDP 227 (358)
Q Consensus 177 ~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~~ 227 (358)
.+++||..||.|.--+-..-+++.-++.. .....++=+++-.|-+|-+
T Consensus 190 ~~~I~ilAHSMGtwl~~e~LrQLai~~~~---~l~~ki~nViLAaPDiD~D 237 (377)
T COG4782 190 VKRIYLLAHSMGTWLLMEALRQLAIRADR---PLPAKIKNVILAAPDIDVD 237 (377)
T ss_pred CceEEEEEecchHHHHHHHHHHHhccCCc---chhhhhhheEeeCCCCChh
Confidence 45799999999987766666666554332 0235577888888877754
No 190
>PRK03995 hypothetical protein; Provisional
Probab=31.20 E-value=88 Score=29.64 Aligned_cols=47 Identities=19% Similarity=0.211 Sum_probs=32.2
Q ss_pred CcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHH
Q 018329 153 GDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHER 202 (358)
Q Consensus 153 ~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~ 202 (358)
.+..+++.+.+.+.+.+..-+.-..+.+.-+| ||||.|.+...+++.
T Consensus 157 ~d~~a~~~vA~avl~~l~~~~~~~~~~~iGiG---GgHYapr~T~~~l~~ 203 (267)
T PRK03995 157 KNERAGEILAEAVIEVLDSIEYEKFKPAIGIG---GGHYAPKFTKLALES 203 (267)
T ss_pred CCcHHHHHHHHHHHHHHhcccccCCCEEEEEC---CCCccHHHHHHHhhC
Confidence 67788888888888877532111223444455 899999999888763
No 191
>PF00121 TIM: Triosephosphate isomerase; InterPro: IPR000652 Triosephosphate isomerase (5.3.1.1 from EC) (TIM) [] is the glycolytic enzyme that catalyses the reversible interconversion of glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. TIM plays an important role in several metabolic pathways and is essential for efficient energy production. It is present in eukaryotes as well as in prokaryotes. TIM is a dimer of identical subunits, each of which is made up of about 250 amino-acid residues. A glutamic acid residue is involved in the catalytic mechanism [, ]. The tertiary structure of TIM has eight beta/alpha motifs folded into a barrel structure. The TIM barrel fold occurs ubiquitously and is found in numerous other enzymes that can be involved in energy metabolism, macromolecule metabolism, or small molecule metabolism []. The sequence around the active site residue is perfectly conserved in all known TIM's. Deficiencies in TIM are associated with haemolytic anaemia coupled with a progressive, severe neurological disorder [].; GO: 0004807 triose-phosphate isomerase activity, 0008152 metabolic process; PDB: 2YPI_A 1YPI_A 1NEY_B 1NF0_B 1I45_A 7TIM_A 3YPI_B 2H6R_H 2Y63_A 1N55_A ....
Probab=31.06 E-value=20 Score=33.50 Aligned_cols=62 Identities=16% Similarity=0.318 Sum_probs=42.4
Q ss_pred cHHHHHHHHHHHHHHHHH-CCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCCC
Q 018329 154 DQVTANDSYAFLIGWFKR-FPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDP 227 (358)
Q Consensus 154 ~~~~a~~~~~fl~~f~~~-fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~~ 227 (358)
+.+.++....+|++++.. |.+-..+.+-|. |||-.-|.=+..+... .++.|++||.+.+++.
T Consensus 176 s~~~~~~~~~~Ir~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~---------~~iDG~LVG~asl~~~ 238 (244)
T PF00121_consen 176 SPEQIQEVHAFIREILAELYGEEVANNIRIL---YGGSVNPENAAELLSQ---------PDIDGVLVGGASLKAE 238 (244)
T ss_dssp CHHHHHHHHHHHHHHHHHHTHHHHHHHSEEE---EESSESTTTHHHHHTS---------TT-SEEEESGGGGSTH
T ss_pred CHHHHHHHHHHHHHHHHHhccccccCceeEE---ECCcCCcccHHHHhcC---------CCCCEEEEchhhhccc
Confidence 456788899999998743 311112234443 8888888888877754 3589999999998874
No 192
>TIGR00419 tim triosephosphate isomerase. Triosephosphate isomerase (tim/TPIA) is the glycolytic enzyme that catalyzes the reversible interconversion of glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. The active site of the enzyme is located between residues 240-258 of the model ([AV]-Y-E-P-[LIVM]-W-[SA]-I-G-T-[GK]) with E being the active site residue. There is a slight deviation from this sequence within the archeal members of this family.
Probab=30.80 E-value=1e+02 Score=27.87 Aligned_cols=55 Identities=2% Similarity=0.030 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCC
Q 018329 155 QVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVIND 226 (358)
Q Consensus 155 ~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~ 226 (358)
.+.++++..+++ +- .+... .+-|. |||-.-|.=+..+... .++.|++||.+.+++
T Consensus 150 ~~~~~~v~~~ir-~~---~~~~~-~~~Il---YGGSV~~~N~~~l~~~---------~~iDG~LvG~Asl~a 204 (205)
T TIGR00419 150 PAQPEVVHGSVR-AV---KEVNE-SVRVL---CGAGISTGEDAELAAQ---------LGAEGVLLASGSLKA 204 (205)
T ss_pred HHHHHHHHHHHH-hh---hhhcC-CceEE---EeCCCCHHHHHHHhcC---------CCCCEEEEeeeeecC
Confidence 456778888887 21 12222 33343 9999999999888764 448899999998875
No 193
>COG0627 Predicted esterase [General function prediction only]
Probab=30.20 E-value=1.2e+02 Score=29.48 Aligned_cols=130 Identities=20% Similarity=0.189 Sum_probs=65.4
Q ss_pred CCCeEEEECCCCChhhhhhhhhhhcCCeEEcCCCCe--eecC-CCCcccccceeEeecCcccccccccCCCcccccCcHH
Q 018329 80 SKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSR--LKFN-KYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQV 156 (358)
Q Consensus 80 ~~pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~--l~~n-~~sW~~~an~l~iDqP~G~GfSy~~~~~~~~~~~~~~ 156 (358)
++.-|+|+.+|..|.-- .+.+.++.+=..+... ++-+ -.-+..-.++--|+ |+|.|.|+-.+-..-.. ...
T Consensus 52 ~~ipV~~~l~G~t~~~~---~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~-p~G~~~sfY~d~~~~~~-~~~- 125 (316)
T COG0627 52 RDIPVLYLLSGLTCNEP---NVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVM-PLGGGASFYSDWTQPPW-ASG- 125 (316)
T ss_pred CCCCEEEEeCCCCCCCC---ceEeccchhhhhhhcCeEEecCCCCcccCCCCccccc-cCCCccceecccccCcc-ccC-
Confidence 44455566667788731 1223333332222111 1111 22244555555566 79999887422111000 000
Q ss_pred HHHHHHHHH-----HHHHHHCCCCCC-CCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCCC
Q 018329 157 TANDSYAFL-----IGWFKRFPNFKS-HDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDP 227 (358)
Q Consensus 157 ~a~~~~~fl-----~~f~~~fp~~~~-~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~~ 227 (358)
..+.+.|| ..|.+.||.-.. ..--|+|+|-||+=+=.+|.+-.+ . ++.+.=-.|+++|.
T Consensus 126 -~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd---~--------f~~~sS~Sg~~~~s 190 (316)
T COG0627 126 -PYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPD---R--------FKSASSFSGILSPS 190 (316)
T ss_pred -ccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcc---h--------hceecccccccccc
Confidence 13333333 245556764432 257899999999976665543321 1 66666667777765
No 194
>KOG3877 consensus NADH:ubiquinone oxidoreductase, NDUFA10/42kDa subunit [Energy production and conversion]
Probab=29.60 E-value=61 Score=31.10 Aligned_cols=51 Identities=25% Similarity=0.565 Sum_probs=35.4
Q ss_pred cccccceeEeecCcccccccccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCcc
Q 018329 123 WNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHY 191 (358)
Q Consensus 123 W~~~an~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~y 191 (358)
.++.+-||-||-|+|+|-+- .|+++.+-|- |..||++.--.+|+ .|||+--
T Consensus 67 f~enSkvI~VeGnI~sGK~k--------------lAKelAe~Lg--f~hfP~~~~d~iyv--dsyg~D~ 117 (393)
T KOG3877|consen 67 FHENSKVIVVEGNIGSGKTK--------------LAKELAEQLG--FVHFPEFRMDDIYV--DSYGNDL 117 (393)
T ss_pred hcccceEEEEeCCcccCchh--------------HHHHHHHHhC--Ccccccccccceee--cccCccc
Confidence 34456789999999999652 3455555554 57899997766777 6888743
No 195
>TIGR03341 YhgI_GntY IscR-regulated protein YhgI. IscR (TIGR02010) is an iron-sulfur cluster-binding transcriptional regulator (see Genome Property GenProp0138). Members of this protein family include YhgI, whose expression is under control of IscR, and show sequence similarity to IscA, a known protein of iron-sulfur cluster biosynthesis. These two lines of evidence strongly suggest a role as an iron-sulfur cluster biosynthesis protein. An older study designated this protein GntY and suggested a role for it and for the product of an adjacent gene, based on complementation studies, in gluconate utilization.
Probab=28.91 E-value=1.1e+02 Score=27.33 Aligned_cols=64 Identities=16% Similarity=0.239 Sum_probs=40.2
Q ss_pred CeEEEECCCCChhhhhhhhh----hhcCC--eEEcCCCCeeecCCCC--cccccceeEeecCcccccccccCC
Q 018329 82 PLVLWLNGGPGCSSIAYGAA----QELGP--FLVGGNGSRLKFNKYS--WNKAANMLFLEAPVGVGFSYTNNS 146 (358)
Q Consensus 82 pl~lwlnGGPG~Ss~~~g~~----~e~GP--~~~~~~~~~l~~n~~s--W~~~an~l~iDqP~G~GfSy~~~~ 146 (358)
.|=|-+.| .|||++.|++= .|..+ ..+..++-++...+.| +-+-+-|=|++...|.||.+.+..
T Consensus 23 ~LRv~V~~-gGCsG~~Y~l~~~~~~~~~~~D~v~e~~g~~v~Vd~~s~~~L~g~~IDyve~~~g~gF~f~NPn 94 (190)
T TIGR03341 23 GIRVFVVN-PGTPYAECCVSYCPPDEVEPSDIKLEFNGFSAYVDALSAPFLEDAVIDFVTDRMGGQLTLKAPN 94 (190)
T ss_pred eEEEEEEC-CccCCceeeeEEcccCCCCCCCEEEEeCCEEEEEccchhhHhCCCEEEEeecCCCceeEEeCCc
Confidence 35566665 48887655541 22222 3334444455555544 777788999999999999987643
No 196
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=28.55 E-value=1.2e+02 Score=29.57 Aligned_cols=53 Identities=17% Similarity=0.163 Sum_probs=37.1
Q ss_pred ceeEeecCcccccccccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCC
Q 018329 128 NMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAG 189 (358)
Q Consensus 128 n~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG 189 (358)
.+.-||.. -.|.|-....- +-+..|+|+..||..+-. .++..+.+|.|||.||
T Consensus 82 ~v~~vd~R-nHG~Sp~~~~h-----~~~~ma~dv~~Fi~~v~~---~~~~~~~~l~GHsmGG 134 (315)
T KOG2382|consen 82 DVYAVDVR-NHGSSPKITVH-----NYEAMAEDVKLFIDGVGG---STRLDPVVLLGHSMGG 134 (315)
T ss_pred ceEEEecc-cCCCCcccccc-----CHHHHHHHHHHHHHHccc---ccccCCceecccCcch
Confidence 56777755 57777433222 456788899888876432 2456689999999999
No 197
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=27.96 E-value=61 Score=28.27 Aligned_cols=39 Identities=10% Similarity=0.021 Sum_probs=27.1
Q ss_pred CCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccC
Q 018329 177 SHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVIN 225 (358)
Q Consensus 177 ~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d 225 (358)
..+.+|+|||.|+.-+-..+. +. ...+++|+++..|+-.
T Consensus 54 ~~~~ilVaHSLGc~~~l~~l~---~~-------~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 54 DEPTILVAHSLGCLTALRWLA---EQ-------SQKKVAGALLVAPFDP 92 (171)
T ss_dssp TTTEEEEEETHHHHHHHHHHH---HT-------CCSSEEEEEEES--SC
T ss_pred CCCeEEEEeCHHHHHHHHHHh---hc-------ccccccEEEEEcCCCc
Confidence 557999999999986655554 21 1356999999999943
No 198
>PF15613 WHIM2: WSTF, HB1, Itc1p, MBD9 motif 2
Probab=27.94 E-value=1.1e+02 Score=19.90 Aligned_cols=26 Identities=15% Similarity=0.439 Sum_probs=12.2
Q ss_pred eEEEEEEeccC-CCCCCCeEEEECCCCC
Q 018329 66 ALFYWFFEAQK-GVSSKPLVLWLNGGPG 92 (358)
Q Consensus 66 ~lfywf~~s~~-~~~~~pl~lwlnGGPG 92 (358)
+-+|||-.+.. ++....-+ |+.+||+
T Consensus 12 NrYwwf~~s~~~~~~~~~~~-~v~~~~~ 38 (38)
T PF15613_consen 12 NRYWWFSSSSSNSQYYNGGR-FVEQGPD 38 (38)
T ss_pred ceEEEEecccccCCCCCceE-EEEeCCC
Confidence 45666644433 23333444 4444564
No 199
>PF04446 Thg1: tRNAHis guanylyltransferase; InterPro: IPR007537 The Thg1 protein from Saccharomyces cerevisiae (Baker's yeast) is responsible for adding a GMP residue to the 5' end of tRNA His [].; PDB: 3OTE_A 3OTC_A 3OTD_A 3OTB_A.
Probab=27.57 E-value=77 Score=26.79 Aligned_cols=52 Identities=17% Similarity=0.249 Sum_probs=34.6
Q ss_pred ceeEeecCcccccccccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccc
Q 018329 128 NMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGES 186 (358)
Q Consensus 128 n~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeS 186 (358)
=||-|| |.||+.-...-.+..-+|....+.+.+.-+..++.+++ ..+..|+|
T Consensus 22 ivvRiD---G~~F~kft~~~~f~KP~D~r~~~~M~~aa~~l~~~~~~----~~~aY~~S 73 (135)
T PF04446_consen 22 IVVRID---GRGFHKFTKRHGFEKPNDERFLKAMNEAAKALMEEFPD----IVLAYGQS 73 (135)
T ss_dssp EEEEEE---ETTHHHHHHHTT--SS--HHHHHHHHHHHHHHHHHSSS----EEEEEEET
T ss_pred EEEEEe---CcchhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhCCC----cEEEEEcC
Confidence 378899 99999754332343337888888899999999999872 45555554
No 200
>PRK15492 triosephosphate isomerase; Provisional
Probab=27.20 E-value=1.3e+02 Score=28.28 Aligned_cols=61 Identities=16% Similarity=0.258 Sum_probs=45.3
Q ss_pred cHHHHHHHHHHHHHHHH-HCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCCC
Q 018329 154 DQVTANDSYAFLIGWFK-RFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDP 227 (358)
Q Consensus 154 ~~~~a~~~~~fl~~f~~-~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~~ 227 (358)
+.+.+++..+++++++. .+-+- ...+-|. |||-.-|.-+..|+.. -++.|++||..-+|+.
T Consensus 187 s~e~~~~~~~~Ir~~l~~~~~~~-~~~irIL---YGGSV~~~N~~~l~~~---------~diDG~LvG~aSl~~~ 248 (260)
T PRK15492 187 SADYADEKHAVIKQCLIELFGDA-GDDIPVF---YGGSVNAENANELFGQ---------PHIDGLFIGRSAWDAD 248 (260)
T ss_pred CHHHHHHHHHHHHHHHHHHhccc-cCceeEE---EcCccCHHHHHHHhcC---------CCCCEEEeehhhcCHH
Confidence 34567888999999864 44322 2345555 9999999999999864 3489999999988874
No 201
>PF07389 DUF1500: Protein of unknown function (DUF1500); InterPro: IPR009974 This family consists of several Orthopoxvirus specific proteins, which include Vaccinia virus, B6 protein, they are around 100 residues in length. The function of this family is unknown.
Probab=26.85 E-value=48 Score=25.85 Aligned_cols=27 Identities=22% Similarity=0.405 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEecccc
Q 018329 159 NDSYAFLIGWFKRFPNFKSHDFYIAGESY 187 (358)
Q Consensus 159 ~~~~~fl~~f~~~fp~~~~~~~yi~GeSY 187 (358)
-+++++.+.|+-+| |-.+.+.+-|+||
T Consensus 7 vdIYDAvRaflLr~--Y~~KrfIV~g~S~ 33 (100)
T PF07389_consen 7 VDIYDAVRAFLLRH--YYDKRFIVYGRSN 33 (100)
T ss_pred hhHHHHHHHHHHHH--HccceEEEecchH
Confidence 46788888887765 4566899999999
No 202
>COG0149 TpiA Triosephosphate isomerase [Carbohydrate transport and metabolism]
Probab=26.71 E-value=1.8e+02 Score=27.37 Aligned_cols=74 Identities=23% Similarity=0.397 Sum_probs=52.2
Q ss_pred eeEeecC---cccccccccCCCcccccCcHHHHHHHHHHHHHHHHH-CCCCCCCCeEEeccccCCccHHHHHHHHHHHhh
Q 018329 129 MLFLEAP---VGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKR-FPNFKSHDFYIAGESYAGHYVPQLAELIHERNI 204 (358)
Q Consensus 129 ~l~iDqP---~G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~-fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~ 204 (358)
+|-.| | +|||-| -+.+.++.+..|++..... |.+- ..+-|- |||-.=|.=+..+..+
T Consensus 162 vIAYE-PvWAIGTG~~-----------at~~~a~~v~~~Ir~~~~~~~~~~--~~v~Il---YGGSV~~~N~~e~~~~-- 222 (251)
T COG0149 162 VIAYE-PVWAIGTGKS-----------ASPADAEEVHAFIRAVLAELFGAE--EKVRIL---YGGSVKPGNAAELAAQ-- 222 (251)
T ss_pred EEEEC-CHHHhcCCCC-----------CCHHHHHHHHHHHHHHHHHhcCCC--CCeEEE---EeCCcChhHHHHHhcC--
Confidence 45555 5 488866 2345688899999988864 4333 345554 8888888877777653
Q ss_pred ccCCCceeeeeeeEeeccccCCCC
Q 018329 205 RAGKDSFINLKGFMIGNAVINDPT 228 (358)
Q Consensus 205 ~~~~~~~inLkGi~igng~~d~~~ 228 (358)
.++.|++||.+.+++..
T Consensus 223 -------~~idG~LVGgAslka~~ 239 (251)
T COG0149 223 -------PDIDGALVGGASLKADD 239 (251)
T ss_pred -------CCCCeEEEcceeecchh
Confidence 45889999999988743
No 203
>PF05887 Trypan_PARP: Procyclic acidic repetitive protein (PARP); InterPro: IPR008882 This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of T. brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated [].; GO: 0016020 membrane; PDB: 2X34_B 2X32_B.
Probab=26.38 E-value=22 Score=29.94 Aligned_cols=25 Identities=28% Similarity=0.465 Sum_probs=0.0
Q ss_pred CCCcchhHHHHH-HHHHHHHHhhhcc
Q 018329 1 MGSTSNCLLCFM-LCTLLVSAVASRS 25 (358)
Q Consensus 1 ~~~~~~~~~~~~-~~~~~~~~~~~~~ 25 (358)
|-+|+-|||.+| +.+.|++++++..
T Consensus 1 m~pr~l~~LavLL~~A~Lfag~g~Aa 26 (143)
T PF05887_consen 1 MTPRHLCLLAVLLFGAALFAGVGSAA 26 (143)
T ss_dssp --------------------------
T ss_pred Cccccccccccccccccccccccccc
Confidence 778999987655 4447787776643
No 204
>TIGR02011 IscA iron-sulfur cluster assembly protein IscA. This clade is limited to the proteobacteria.
Probab=25.89 E-value=69 Score=25.48 Aligned_cols=63 Identities=25% Similarity=0.462 Sum_probs=38.1
Q ss_pred CCeEEEECCCCChhhhhhhhh--hhcCC--eEEcCCCCeeecCCCC--cccccceeEeecCccccccccc
Q 018329 81 KPLVLWLNGGPGCSSIAYGAA--QELGP--FLVGGNGSRLKFNKYS--WNKAANMLFLEAPVGVGFSYTN 144 (358)
Q Consensus 81 ~pl~lwlnGGPG~Ss~~~g~~--~e~GP--~~~~~~~~~l~~n~~s--W~~~an~l~iDqP~G~GfSy~~ 144 (358)
..|=|-+.+| |||++.|.+- .|..+ ..+..++-++...+.+ +-+-+.|=|+|.+.|.||...+
T Consensus 22 ~~lRi~v~~~-GCsG~~y~l~l~~~~~~~D~v~~~~g~~v~id~~s~~~l~g~~IDy~~~~~~~~F~~~n 90 (105)
T TIGR02011 22 FGLRLGVKTS-GCSGMAYVLEFVDEPTPDDIVFEDKGVKIVIDGKSLQYLDGTQLDFVKEGLNEGFKFTN 90 (105)
T ss_pred ceEEEEEeCC-CCCCEEEEeeecCCCCCCCEEEEcCCEEEEEcHHHhHHhCCCEEEEecCCCcceEEEEC
Confidence 3566666655 8888545542 34444 2333444444444433 5666678899999999998754
No 205
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=25.10 E-value=65 Score=31.54 Aligned_cols=65 Identities=23% Similarity=0.396 Sum_probs=40.1
Q ss_pred cceeEeecCcccc-ccccc----------CCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHH
Q 018329 127 ANMLFLEAPVGVG-FSYTN----------NSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQL 195 (358)
Q Consensus 127 an~l~iDqP~G~G-fSy~~----------~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~l 195 (358)
.-|+|-|+-|||| |--.- ...-+.. +..+-.+..|.||.+.|+ | .-.+|++|-|=|...+=.+
T Consensus 66 ~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~-gL~~nI~~AYrFL~~~ye--p---GD~Iy~FGFSRGAf~aRVl 139 (423)
T COG3673 66 TQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQ-GLVQNIREAYRFLIFNYE--P---GDEIYAFGFSRGAFSARVL 139 (423)
T ss_pred eEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHH-HHHHHHHHHHHHHHHhcC--C---CCeEEEeeccchhHHHHHH
Confidence 4589999999987 22110 0111211 455556677888876554 2 4579999999876555555
Q ss_pred HH
Q 018329 196 AE 197 (358)
Q Consensus 196 a~ 197 (358)
|-
T Consensus 140 ag 141 (423)
T COG3673 140 AG 141 (423)
T ss_pred HH
Confidence 44
No 206
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=24.56 E-value=83 Score=32.19 Aligned_cols=44 Identities=11% Similarity=0.153 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHHHCCCCCC-CCeEEeccccCCccHHHHHHHH
Q 018329 156 VTANDSYAFLIGWFKRFPNFKS-HDFYIAGESYAGHYVPQLAELI 199 (358)
Q Consensus 156 ~~a~~~~~fl~~f~~~fp~~~~-~~~yi~GeSYgG~yvp~la~~i 199 (358)
+..++.+.-|++.++..=+... +++.|++||-||.|+=++-...
T Consensus 159 e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~ 203 (473)
T KOG2369|consen 159 EERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWV 203 (473)
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcc
Confidence 3445555555555554333334 8999999999999988776544
No 207
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=24.29 E-value=93 Score=29.05 Aligned_cols=64 Identities=17% Similarity=0.227 Sum_probs=41.1
Q ss_pred ceeEeecCcccccccccCCCcccccCcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHH
Q 018329 128 NMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHER 202 (358)
Q Consensus 128 n~l~iDqP~G~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~ 202 (358)
.++-|+-| |-|==+.. ...+ +.++.|+.+...|+. -+..+|+-++|+|+||+..=.+|.++.+.
T Consensus 35 el~avqlP-GR~~r~~e---p~~~-di~~Lad~la~el~~------~~~d~P~alfGHSmGa~lAfEvArrl~~~ 98 (244)
T COG3208 35 ELLAVQLP-GRGDRFGE---PLLT-DIESLADELANELLP------PLLDAPFALFGHSMGAMLAFEVARRLERA 98 (244)
T ss_pred heeeecCC-CcccccCC---cccc-cHHHHHHHHHHHhcc------ccCCCCeeecccchhHHHHHHHHHHHHHc
Confidence 35666655 55422221 1222 566666666665542 34577999999999999888888877653
No 208
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=24.07 E-value=2.7e+02 Score=22.13 Aligned_cols=40 Identities=23% Similarity=0.377 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhh
Q 018329 160 DSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNI 204 (358)
Q Consensus 160 ~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~ 204 (358)
.=...|++.++.|| .++|.+.|.| |.-=|.+-..|.++..
T Consensus 50 ~K~~~i~~i~~~fP---~~kfiLIGDs--gq~DpeiY~~ia~~~P 89 (100)
T PF09949_consen 50 HKRDNIERILRDFP---ERKFILIGDS--GQHDPEIYAEIARRFP 89 (100)
T ss_pred HHHHHHHHHHHHCC---CCcEEEEeeC--CCcCHHHHHHHHHHCC
Confidence 45566777788899 4479999998 4444888888877653
No 209
>PRK06762 hypothetical protein; Provisional
Probab=24.05 E-value=44 Score=28.36 Aligned_cols=13 Identities=15% Similarity=0.493 Sum_probs=11.7
Q ss_pred CeEEEECCCCChh
Q 018329 82 PLVLWLNGGPGCS 94 (358)
Q Consensus 82 pl~lwlnGGPG~S 94 (358)
|.++|+.|.|||-
T Consensus 2 ~~li~i~G~~GsG 14 (166)
T PRK06762 2 TTLIIIRGNSGSG 14 (166)
T ss_pred CeEEEEECCCCCC
Confidence 7899999999986
No 210
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=23.44 E-value=1.3e+02 Score=32.00 Aligned_cols=35 Identities=6% Similarity=-0.071 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHH
Q 018329 161 SYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAEL 198 (358)
Q Consensus 161 ~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~ 198 (358)
+-..++.-++.. .++++.|+|||+||.++=++-+.
T Consensus 199 LK~lIE~ay~~n---ggkKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 199 LKSNIELMVATN---GGKKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred HHHHHHHHHHHc---CCCeEEEEEeCCchHHHHHHHHh
Confidence 444444444442 25689999999999887776553
No 211
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=23.42 E-value=1e+02 Score=27.21 Aligned_cols=27 Identities=19% Similarity=0.370 Sum_probs=22.2
Q ss_pred CCCCCCeEEeccccCCccHHHHHHHHH
Q 018329 174 NFKSHDFYIAGESYAGHYVPQLAELIH 200 (358)
Q Consensus 174 ~~~~~~~yi~GeSYgG~yvp~la~~i~ 200 (358)
.+..-|+.|.|.||||.....+|..+.
T Consensus 85 ~l~~gpLi~GGkSmGGR~aSmvade~~ 111 (213)
T COG3571 85 GLAEGPLIIGGKSMGGRVASMVADELQ 111 (213)
T ss_pred cccCCceeeccccccchHHHHHHHhhc
Confidence 445568999999999999888887664
No 212
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=22.65 E-value=41 Score=32.31 Aligned_cols=34 Identities=18% Similarity=0.088 Sum_probs=22.0
Q ss_pred HHHHHHHHHHCCCCCCCCeEEeccccCCccHHHH
Q 018329 162 YAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQL 195 (358)
Q Consensus 162 ~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~l 195 (358)
.+.|..|...-..|-...++++|||-||..+..+
T Consensus 260 Sa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLl 293 (425)
T KOG4540|consen 260 SAALDILGAVRRIYPDARIWLTGHSLGGAIASLL 293 (425)
T ss_pred HHHHHHHHHHHHhCCCceEEEeccccchHHHHHh
Confidence 3445555444334446689999999999765444
No 213
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=22.65 E-value=41 Score=32.31 Aligned_cols=34 Identities=18% Similarity=0.088 Sum_probs=22.0
Q ss_pred HHHHHHHHHHCCCCCCCCeEEeccccCCccHHHH
Q 018329 162 YAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQL 195 (358)
Q Consensus 162 ~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~l 195 (358)
.+.|..|...-..|-...++++|||-||..+..+
T Consensus 260 Sa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLl 293 (425)
T COG5153 260 SAALDILGAVRRIYPDARIWLTGHSLGGAIASLL 293 (425)
T ss_pred HHHHHHHHHHHHhCCCceEEEeccccchHHHHHh
Confidence 3445555444334446689999999999765444
No 214
>PF10929 DUF2811: Protein of unknown function (DUF2811); InterPro: IPR021231 This is a bacterial family of uncharacterised proteins.
Probab=22.58 E-value=86 Score=22.45 Aligned_cols=22 Identities=14% Similarity=0.279 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHCCCCCCC
Q 018329 157 TANDSYAFLIGWFKRFPNFKSH 178 (358)
Q Consensus 157 ~a~~~~~fl~~f~~~fp~~~~~ 178 (358)
.-+++++.|+.|.+.||++...
T Consensus 6 iPe~L~~~m~~fie~hP~WDQ~ 27 (57)
T PF10929_consen 6 IPEDLHQAMKDFIETHPNWDQY 27 (57)
T ss_pred ccHHHHHHHHHHHHcCCCchHH
Confidence 4478999999999999999653
No 215
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=22.08 E-value=66 Score=28.84 Aligned_cols=62 Identities=13% Similarity=0.054 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCC
Q 018329 158 ANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVIND 226 (358)
Q Consensus 158 a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~ 226 (358)
.++.++.|.++.++..-| -=|.|-|-|+..+..++......... .....+|-+++.+|+.-+
T Consensus 86 ~~~sl~~l~~~i~~~GPf----dGvlGFSQGA~lAa~ll~~~~~~~~~---~~~~~~kf~V~~sg~~p~ 147 (212)
T PF03959_consen 86 LDESLDYLRDYIEENGPF----DGVLGFSQGAALAALLLALQQRGRPD---GAHPPFKFAVFISGFPPP 147 (212)
T ss_dssp -HHHHHHHHHHHHHH-------SEEEEETHHHHHHHHHHHHHHHHST-----T----SEEEEES----E
T ss_pred HHHHHHHHHHHHHhcCCe----EEEEeecHHHHHHHHHHHHHHhhccc---ccCCCceEEEEEcccCCC
Confidence 445566666666654312 44899999999888777665543321 124567888888887654
No 216
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=21.96 E-value=72 Score=26.72 Aligned_cols=17 Identities=41% Similarity=0.575 Sum_probs=14.4
Q ss_pred CCCCCeEEEECCCCChh
Q 018329 78 VSSKPLVLWLNGGPGCS 94 (358)
Q Consensus 78 ~~~~pl~lwlnGGPG~S 94 (358)
..++||||=|+|.||+-
T Consensus 49 ~p~KpLVlSfHG~tGtG 65 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTG 65 (127)
T ss_pred CCCCCEEEEeecCCCCc
Confidence 34679999999999975
No 217
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=20.69 E-value=1.3e+02 Score=29.20 Aligned_cols=45 Identities=11% Similarity=0.144 Sum_probs=35.8
Q ss_pred CcHHHHHHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHH
Q 018329 153 GDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIH 200 (358)
Q Consensus 153 ~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~ 200 (358)
+....++++...+.+.+.... .+++.|.|||-||.-+.+++..+-
T Consensus 105 ~~~~~~~ql~~~V~~~l~~~g---a~~v~LigHS~GG~~~ry~~~~~~ 149 (336)
T COG1075 105 SLAVRGEQLFAYVDEVLAKTG---AKKVNLIGHSMGGLDSRYYLGVLG 149 (336)
T ss_pred cccccHHHHHHHHHHHHhhcC---CCceEEEeecccchhhHHHHhhcC
Confidence 455668889999998777654 578999999999999987766554
No 218
>PF08060 NOSIC: NOSIC (NUC001) domain; InterPro: IPR012976 This is the central domain in Nop56/SIK1-like proteins [].; PDB: 3PLA_K 3ICX_B 3ID6_A 3ID5_E 3NVM_A 3NMU_B 2NNW_C 3NVI_A 3NVK_A 2OZB_E ....
Probab=20.68 E-value=77 Score=22.05 Aligned_cols=22 Identities=23% Similarity=0.446 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHH-HCCCCC
Q 018329 155 QVTANDSYAFLIGWFK-RFPNFK 176 (358)
Q Consensus 155 ~~~a~~~~~fl~~f~~-~fp~~~ 176 (358)
+.....+..++++||. +|||+.
T Consensus 13 d~ei~~~~~~lre~Y~~~FPEL~ 35 (53)
T PF08060_consen 13 DKEINLLHMRLREWYSWHFPELE 35 (53)
T ss_dssp HHHHHHHHHHHHHHHTTTSTTHH
T ss_pred HHHHHHHHHHHHHHHHccchhHH
Confidence 3455678899999995 699974
No 219
>PRK07868 acyl-CoA synthetase; Validated
Probab=20.44 E-value=2.9e+02 Score=31.11 Aligned_cols=39 Identities=18% Similarity=0.259 Sum_probs=26.7
Q ss_pred CCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccccCC
Q 018329 178 HDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVIND 226 (358)
Q Consensus 178 ~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~~d~ 226 (358)
.+++++|.|.||..+-.+|.. +.. -.++++++.+.-+|.
T Consensus 141 ~~v~lvG~s~GG~~a~~~aa~---~~~-------~~v~~lvl~~~~~d~ 179 (994)
T PRK07868 141 RDVHLVGYSQGGMFCYQAAAY---RRS-------KDIASIVTFGSPVDT 179 (994)
T ss_pred CceEEEEEChhHHHHHHHHHh---cCC-------CccceEEEEeccccc
Confidence 479999999999988776653 111 126777776666553
No 220
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=20.25 E-value=2.2e+02 Score=25.33 Aligned_cols=50 Identities=18% Similarity=0.120 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEeccccCCccHHHHHHHHHHHhhccCCCceeeeeeeEeeccc
Q 018329 159 NDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAV 223 (358)
Q Consensus 159 ~~~~~fl~~f~~~fp~~~~~~~yi~GeSYgG~yvp~la~~i~~~~~~~~~~~~inLkGi~igng~ 223 (358)
+|-.+.|++-... ..+|.||++||-|+.-+...+.++.. .++|+++..|.
T Consensus 44 ~dWi~~l~~~v~a----~~~~~vlVAHSLGc~~v~h~~~~~~~-----------~V~GalLVApp 93 (181)
T COG3545 44 DDWIARLEKEVNA----AEGPVVLVAHSLGCATVAHWAEHIQR-----------QVAGALLVAPP 93 (181)
T ss_pred HHHHHHHHHHHhc----cCCCeEEEEecccHHHHHHHHHhhhh-----------ccceEEEecCC
Confidence 4455555543332 25689999999998766666655533 38898888875
No 221
>KOG3372 consensus Signal peptidase complex subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=20.17 E-value=3.7e+02 Score=23.71 Aligned_cols=14 Identities=43% Similarity=0.728 Sum_probs=9.4
Q ss_pred CCcchhHHHHHHHH
Q 018329 2 GSTSNCLLCFMLCT 15 (358)
Q Consensus 2 ~~~~~~~~~~~~~~ 15 (358)
|+|+|-|+.+.+..
T Consensus 5 ~~R~nal~sf~~sv 18 (176)
T KOG3372|consen 5 GSRANALFSFTLSV 18 (176)
T ss_pred hhhhHHHHHHHHHH
Confidence 67888886665443
Done!