Query 018336
Match_columns 358
No_of_seqs 210 out of 2572
Neff 10.4
Searched_HMMs 29240
Date Mon Mar 25 13:40:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018336.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018336hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ii7_A Kelch-like protein 7; p 100.0 1.4E-39 4.8E-44 288.1 32.0 254 76-349 10-288 (306)
2 2xn4_A Kelch-like protein 2; s 100.0 2.8E-39 9.5E-44 285.6 31.4 260 76-356 14-298 (302)
3 1zgk_A Kelch-like ECH-associat 100.0 3.1E-39 1.1E-43 286.1 30.5 260 75-355 22-307 (308)
4 2vpj_A Kelch-like protein 12; 100.0 1.2E-38 4.2E-43 281.4 30.0 260 76-356 13-299 (301)
5 4asc_A Kelch repeat and BTB do 100.0 3.2E-38 1.1E-42 280.5 26.5 250 77-349 4-291 (315)
6 2woz_A Kelch repeat and BTB do 100.0 3.5E-37 1.2E-41 274.2 27.2 252 76-350 14-302 (318)
7 2uvk_A YJHT; unknown function, 100.0 4.5E-34 1.5E-38 258.2 25.9 247 77-344 19-353 (357)
8 1zgk_A Kelch-like ECH-associat 100.0 2.8E-33 9.6E-38 247.8 23.9 215 128-349 15-256 (308)
9 4asc_A Kelch repeat and BTB do 100.0 3.7E-33 1.3E-37 247.9 22.7 261 47-319 15-306 (315)
10 2xn4_A Kelch-like protein 2; s 100.0 3E-32 1E-36 240.5 26.5 210 132-349 10-245 (302)
11 2woz_A Kelch repeat and BTB do 100.0 1.4E-32 4.7E-37 244.5 21.8 260 47-318 26-315 (318)
12 3ii7_A Kelch-like protein 7; p 100.0 5.4E-32 1.8E-36 239.3 25.1 203 137-349 11-241 (306)
13 2uvk_A YJHT; unknown function, 100.0 7.3E-32 2.5E-36 243.7 23.8 224 116-349 2-310 (357)
14 2vpj_A Kelch-like protein 12; 100.0 2.6E-31 8.9E-36 234.4 25.1 208 135-349 12-247 (301)
15 2zwa_A Leucine carboxyl methyl 100.0 5E-31 1.7E-35 256.9 25.1 224 76-344 396-645 (695)
16 2zwa_A Leucine carboxyl methyl 100.0 1.1E-27 3.8E-32 233.4 23.6 186 129-349 389-600 (695)
17 1k3i_A Galactose oxidase precu 100.0 4.3E-27 1.5E-31 228.8 23.3 288 50-350 171-514 (656)
18 1k3i_A Galactose oxidase precu 99.9 2.8E-26 9.4E-31 223.2 16.9 234 103-349 167-459 (656)
19 1fs1_A SKP2 F-BOX, cyclin A/CD 98.9 9.5E-10 3.2E-14 69.0 4.3 45 24-68 6-50 (53)
20 2e31_A FBS1, F-box only protei 98.9 8.1E-10 2.8E-14 94.3 4.9 50 24-73 48-98 (297)
21 2ovr_B FBW7, F-BOX/WD repeat p 98.8 5.3E-06 1.8E-10 76.2 26.2 45 25-69 17-61 (445)
22 3v7d_B Cell division control p 98.8 6.6E-07 2.3E-11 82.6 19.7 42 26-67 14-56 (464)
23 1p22_A F-BOX/WD-repeat protein 98.7 1.7E-06 5.9E-11 79.3 20.3 43 26-68 10-56 (435)
24 3mbr_X Glutamine cyclotransfer 98.1 0.00041 1.4E-08 57.7 18.3 158 130-336 23-181 (243)
25 3nol_A Glutamine cyclotransfer 97.9 0.00046 1.6E-08 57.9 14.4 159 131-338 46-205 (262)
26 3dsm_A Uncharacterized protein 97.8 0.016 5.4E-07 50.6 23.5 191 102-343 17-222 (328)
27 3nok_A Glutaminyl cyclase; bet 97.6 0.0033 1.1E-07 52.8 16.2 154 131-336 58-212 (268)
28 3dsm_A Uncharacterized protein 97.6 0.012 4.3E-07 51.3 20.8 183 102-338 64-257 (328)
29 3mbr_X Glutamine cyclotransfer 97.6 0.0018 6.2E-08 53.8 14.3 113 179-336 23-135 (243)
30 2iwa_A Glutamine cyclotransfer 97.5 0.014 4.9E-07 49.2 19.0 157 131-336 24-183 (266)
31 3q7m_A Lipoprotein YFGL, BAMB; 97.5 0.027 9.1E-07 50.0 21.2 172 102-340 113-304 (376)
32 3l2o_B F-box only protein 4; s 97.5 3.8E-05 1.3E-09 65.0 2.1 47 26-72 4-50 (312)
33 3nol_A Glutamine cyclotransfer 97.3 0.0028 9.7E-08 53.1 11.1 112 180-336 46-157 (262)
34 3q7m_A Lipoprotein YFGL, BAMB; 97.0 0.15 5.2E-06 45.0 23.0 174 102-339 153-344 (376)
35 2ast_B S-phase kinase-associat 97.0 0.00036 1.2E-08 61.3 3.2 44 23-66 5-48 (336)
36 3vgz_A Uncharacterized protein 96.9 0.14 4.8E-06 44.4 19.2 208 102-340 69-309 (353)
37 1l0q_A Surface layer protein; 96.8 0.037 1.3E-06 49.1 14.9 135 102-267 12-152 (391)
38 2hqs_A Protein TOLB; TOLB, PAL 96.7 0.14 4.8E-06 46.1 18.0 215 102-340 159-393 (415)
39 3nok_A Glutaminyl cyclase; bet 96.6 0.028 9.7E-07 47.1 11.7 109 180-336 58-166 (268)
40 3no2_A Uncharacterized protein 96.6 0.21 7.3E-06 42.2 17.7 176 102-340 15-203 (276)
41 1rwi_B Serine/threonine-protei 96.6 0.26 8.8E-06 40.9 18.1 136 102-266 46-184 (270)
42 2iwa_A Glutamine cyclotransfer 96.6 0.038 1.3E-06 46.6 12.5 113 180-336 24-137 (266)
43 1l0q_A Surface layer protein; 96.4 0.1 3.5E-06 46.1 15.5 134 102-266 54-193 (391)
44 2p1m_B Transport inhibitor res 96.2 0.002 7E-08 61.2 2.8 36 25-60 4-40 (594)
45 1rwi_B Serine/threonine-protei 96.2 0.44 1.5E-05 39.4 17.2 133 103-264 88-224 (270)
46 2z2n_A Virginiamycin B lyase; 96.1 0.51 1.7E-05 39.6 20.3 136 103-268 37-176 (299)
47 1q7f_A NHL, brain tumor CG1071 96.1 0.54 1.9E-05 39.4 21.8 145 102-268 51-200 (286)
48 4a2l_A BT_4663, two-component 95.9 0.76 2.6E-05 45.2 19.9 180 102-340 427-620 (795)
49 3v9f_A Two-component system se 95.9 0.55 1.9E-05 46.1 18.6 180 102-340 427-617 (781)
50 3jrp_A Fusion protein of prote 95.8 0.25 8.5E-06 43.1 14.6 135 103-263 80-241 (379)
51 3u4y_A Uncharacterized protein 95.8 0.42 1.4E-05 40.9 15.8 97 102-217 20-122 (331)
52 3g4e_A Regucalcin; six bladed 95.7 0.26 8.8E-06 42.0 13.9 186 102-343 35-239 (297)
53 3bws_A Protein LP49; two-domai 95.6 0.34 1.2E-05 43.3 15.0 96 156-265 102-203 (433)
54 2ojh_A Uncharacterized protein 95.6 0.81 2.8E-05 37.9 18.2 190 103-340 63-264 (297)
55 2ovr_B FBW7, F-BOX/WD repeat p 95.6 1.2 4.2E-05 40.0 20.2 105 135-264 246-350 (445)
56 1kb0_A Quinohemoprotein alcoho 95.6 1.6 5.5E-05 42.1 20.3 119 133-269 73-208 (677)
57 2qc5_A Streptogramin B lactona 95.6 0.87 3E-05 38.1 19.7 137 102-268 41-181 (300)
58 1gxr_A ESG1, transducin-like e 95.5 0.62 2.1E-05 39.7 15.8 179 102-338 119-300 (337)
59 1gxr_A ESG1, transducin-like e 95.5 0.69 2.3E-05 39.4 16.0 105 137-264 108-216 (337)
60 3bws_A Protein LP49; two-domai 95.5 1.1 3.7E-05 40.0 17.8 145 103-265 145-295 (433)
61 1pjx_A Dfpase, DIISOPROPYLFLUO 95.4 0.42 1.5E-05 40.6 14.3 142 103-265 47-211 (314)
62 3hfq_A Uncharacterized protein 95.3 0.26 8.9E-06 42.8 12.6 147 101-269 17-179 (347)
63 4ery_A WD repeat-containing pr 95.3 1.2 4E-05 37.8 18.0 133 103-265 46-183 (312)
64 1k8k_C P40, ARP2/3 complex 41 95.2 0.49 1.7E-05 41.1 14.4 97 102-214 30-129 (372)
65 2dg1_A DRP35, lactonase; beta 95.2 1.3 4.4E-05 38.0 18.0 141 103-262 67-213 (333)
66 3v9f_A Two-component system se 95.2 1.5 5.2E-05 42.9 19.1 186 103-340 334-530 (781)
67 1npe_A Nidogen, entactin; glyc 95.1 1.2 4.3E-05 36.9 20.6 180 102-340 58-244 (267)
68 2z2n_A Virginiamycin B lyase; 95.0 1.3 4.5E-05 37.0 20.6 136 103-268 79-218 (299)
69 1kb0_A Quinohemoprotein alcoho 94.8 3 0.0001 40.2 25.3 108 102-218 87-207 (677)
70 2ojh_A Uncharacterized protein 94.8 1.4 4.9E-05 36.4 17.9 145 102-270 22-170 (297)
71 3e5z_A Putative gluconolactona 94.7 1.6 5.6E-05 36.6 17.5 138 102-265 50-206 (296)
72 3azo_A Aminopeptidase; POP fam 94.6 1.6 5.6E-05 41.5 17.3 192 102-340 161-375 (662)
73 3jrp_A Fusion protein of prote 94.6 0.34 1.2E-05 42.2 11.6 106 137-263 22-135 (379)
74 3ogk_B Coronatine-insensitive 94.6 0.014 4.7E-07 55.5 2.5 34 27-60 13-47 (592)
75 4g56_B MGC81050 protein; prote 94.6 0.36 1.2E-05 42.4 11.6 106 137-264 150-260 (357)
76 1p22_A F-BOX/WD-repeat protein 94.5 0.67 2.3E-05 41.7 13.6 175 134-338 139-329 (435)
77 2qc5_A Streptogramin B lactona 94.5 1.8 6.3E-05 36.0 20.0 181 102-343 83-268 (300)
78 4e54_B DNA damage-binding prot 94.4 0.73 2.5E-05 41.5 13.6 135 103-264 143-284 (435)
79 2ghs_A AGR_C_1268P; regucalcin 94.4 2.2 7.4E-05 36.7 17.0 133 102-261 71-209 (326)
80 1pex_A Collagenase-3, MMP-13; 94.4 1.6 5.5E-05 35.0 16.7 154 130-338 26-196 (207)
81 4a2l_A BT_4663, two-component 94.3 4.5 0.00015 39.7 20.8 142 103-270 108-252 (795)
82 2dg1_A DRP35, lactonase; beta 94.2 1.5 5E-05 37.6 14.7 120 137-268 55-177 (333)
83 3no2_A Uncharacterized protein 94.2 2.2 7.6E-05 35.8 16.1 136 103-268 57-203 (276)
84 3c5m_A Oligogalacturonate lyas 94.1 2.4 8.3E-05 37.0 16.2 155 102-269 168-336 (396)
85 1k8k_C P40, ARP2/3 complex 41 94.1 0.58 2E-05 40.7 12.0 107 137-264 19-129 (372)
86 3vgz_A Uncharacterized protein 94.1 2.5 8.7E-05 36.1 19.5 137 102-266 164-307 (353)
87 3fm0_A Protein CIAO1; WDR39,SG 94.0 1.4 4.8E-05 38.1 14.1 146 103-271 39-190 (345)
88 3dwl_C Actin-related protein 2 93.9 0.22 7.4E-06 43.7 8.8 138 103-264 34-179 (377)
89 3dwl_C Actin-related protein 2 93.9 0.18 6.1E-06 44.3 8.1 107 137-264 22-133 (377)
90 4aez_A CDC20, WD repeat-contai 93.9 2.1 7.2E-05 37.9 15.3 149 137-336 228-382 (401)
91 1ri6_A Putative isomerase YBHE 93.8 2.4 8.1E-05 36.1 15.2 160 137-344 140-321 (343)
92 4ery_A WD repeat-containing pr 93.8 2.7 9.2E-05 35.5 19.0 179 103-336 88-270 (312)
93 3jro_A Fusion protein of prote 93.8 1.3 4.3E-05 43.4 14.7 95 103-213 32-133 (753)
94 4gqb_B Methylosome protein 50; 93.8 1 3.5E-05 39.3 12.8 105 137-264 138-248 (344)
95 3fm0_A Protein CIAO1; WDR39,SG 93.6 1.3 4.3E-05 38.5 13.1 155 137-340 27-187 (345)
96 2z3z_A Dipeptidyl aminopeptida 93.6 3 0.0001 40.1 16.9 152 102-269 235-398 (706)
97 3dr2_A Exported gluconolactona 93.6 3 0.0001 35.3 16.0 191 103-344 68-277 (305)
98 3scy_A Hypothetical bacterial 93.5 2.7 9.2E-05 36.4 15.2 99 101-213 28-130 (361)
99 3v7d_B Cell division control p 93.5 4.1 0.00014 36.6 20.7 147 136-338 278-425 (464)
100 3ow8_A WD repeat-containing pr 93.5 2.4 8E-05 36.4 14.4 103 137-264 91-197 (321)
101 1ri6_A Putative isomerase YBHE 93.4 1.5 5E-05 37.4 13.2 111 137-268 49-167 (343)
102 1jmx_B Amine dehydrogenase; ox 93.4 0.43 1.5E-05 41.0 9.6 68 136-216 9-78 (349)
103 4aez_A CDC20, WD repeat-contai 93.3 1.7 6E-05 38.4 13.8 93 155-263 113-206 (401)
104 3ei3_B DNA damage-binding prot 93.2 3.9 0.00013 35.6 16.0 133 103-262 97-236 (383)
105 2ad6_A Methanol dehydrogenase 93.1 5.9 0.0002 37.2 21.7 120 133-269 58-194 (571)
106 2hqs_A Protein TOLB; TOLB, PAL 93.1 4.7 0.00016 36.0 17.2 145 102-270 247-395 (415)
107 1pjx_A Dfpase, DIISOPROPYLFLUO 93.0 1.9 6.6E-05 36.3 13.1 142 103-264 93-258 (314)
108 3ow8_A WD repeat-containing pr 93.0 3.9 0.00013 34.9 18.4 135 102-265 102-240 (321)
109 1r5m_A SIR4-interacting protei 92.9 4 0.00014 35.8 15.6 91 155-264 227-321 (425)
110 3vl1_A 26S proteasome regulato 92.9 2.4 8.1E-05 37.5 14.1 104 137-264 108-214 (420)
111 2ad6_A Methanol dehydrogenase 92.8 4.5 0.00015 38.0 16.4 121 181-340 57-193 (571)
112 2aq5_A Coronin-1A; WD40 repeat 92.8 2.9 0.0001 36.8 14.5 108 139-264 145-256 (402)
113 2aq5_A Coronin-1A; WD40 repeat 92.7 3 0.0001 36.8 14.4 108 137-265 93-210 (402)
114 1yiq_A Quinohemoprotein alcoho 92.6 3.4 0.00012 39.9 15.5 118 133-268 66-200 (689)
115 2p4o_A Hypothetical protein; p 92.6 4.2 0.00015 34.4 21.1 135 102-262 53-198 (306)
116 1nir_A Nitrite reductase; hemo 92.6 6.6 0.00023 36.6 17.2 92 102-215 159-260 (543)
117 1kv9_A Type II quinohemoprotei 92.5 2.8 9.6E-05 40.3 14.7 118 133-268 62-195 (668)
118 1got_B GT-beta; complex (GTP-b 92.4 4.8 0.00016 34.6 18.0 93 155-264 164-259 (340)
119 1qhu_A Protein (hemopexin); be 92.4 3.6 0.00012 37.5 14.3 57 137-213 158-216 (460)
120 1w6s_A Methanol dehydrogenase 92.3 7.7 0.00026 36.7 19.2 122 132-270 57-201 (599)
121 1pby_B Quinohemoprotein amine 92.3 4.2 0.00014 34.4 14.4 102 102-216 56-167 (337)
122 3jro_A Fusion protein of prote 92.2 0.65 2.2E-05 45.4 10.0 106 137-263 20-133 (753)
123 1kv9_A Type II quinohemoprotei 92.1 3.9 0.00013 39.3 15.2 120 181-340 61-195 (668)
124 2hz6_A Endoplasmic reticulum t 92.1 0.11 3.9E-06 46.0 4.2 107 134-267 6-118 (369)
125 3odt_A Protein DOA1; ubiquitin 92.1 4.6 0.00016 33.7 15.9 147 137-340 154-302 (313)
126 3bg1_A Protein SEC13 homolog; 92.0 3.2 0.00011 35.3 13.2 35 307-345 270-306 (316)
127 1itv_A MMP9; adaptive molecula 91.9 3.9 0.00013 32.4 14.4 152 131-337 10-177 (195)
128 3hfq_A Uncharacterized protein 91.9 2.1 7.1E-05 36.9 12.1 103 156-270 19-126 (347)
129 1w6s_A Methanol dehydrogenase 91.9 8.7 0.0003 36.3 22.5 108 103-219 74-200 (599)
130 2fp8_A Strictosidine synthase; 91.8 2.7 9.2E-05 35.9 12.6 191 103-335 102-314 (322)
131 1yiq_A Quinohemoprotein alcoho 91.8 6.1 0.00021 38.1 16.1 121 181-340 65-200 (689)
132 3mkq_A Coatomer beta'-subunit; 91.6 4.6 0.00016 39.4 15.4 134 103-264 36-174 (814)
133 3azo_A Aminopeptidase; POP fam 91.5 4.8 0.00017 38.2 15.1 158 154-340 160-331 (662)
134 1r5m_A SIR4-interacting protei 91.3 7 0.00024 34.1 17.5 105 137-264 160-280 (425)
135 1erj_A Transcriptional repress 91.3 2.1 7.1E-05 37.9 11.6 105 137-265 134-241 (393)
136 1ijq_A LDL receptor, low-densi 91.3 6.4 0.00022 33.6 19.9 130 103-264 11-154 (316)
137 3c5m_A Oligogalacturonate lyas 91.2 2.2 7.5E-05 37.3 11.7 150 154-340 167-335 (396)
138 1n7d_A LDL receptor, low-densi 91.2 5.2 0.00018 38.7 14.9 148 136-337 463-617 (699)
139 4g56_B MGC81050 protein; prote 91.1 7 0.00024 33.9 15.5 135 103-265 162-304 (357)
140 1vyh_C Platelet-activating fac 91.1 3.5 0.00012 36.7 12.9 148 137-338 119-269 (410)
141 1erj_A Transcriptional repress 91.1 5.4 0.00019 35.1 14.1 133 103-263 146-288 (393)
142 2xdw_A Prolyl endopeptidase; a 91.0 12 0.0004 36.1 19.1 101 154-264 258-370 (710)
143 3e5z_A Putative gluconolactona 91.0 6.2 0.00021 32.9 14.4 146 102-268 90-252 (296)
144 4e54_B DNA damage-binding prot 91.0 2.1 7.3E-05 38.3 11.5 106 137-263 131-241 (435)
145 3ei3_B DNA damage-binding prot 90.9 7.2 0.00025 33.9 14.7 104 139-263 87-195 (383)
146 3pe7_A Oligogalacturonate lyas 90.9 7.2 0.00025 33.8 14.7 157 102-270 168-337 (388)
147 4gqb_B Methylosome protein 50; 90.9 1.8 6.3E-05 37.6 10.6 95 155-265 103-204 (344)
148 4aow_A Guanine nucleotide-bind 90.7 1.7 5.8E-05 37.0 10.2 92 156-264 196-288 (340)
149 2pm9_A Protein WEB1, protein t 90.7 8.1 0.00028 33.8 16.5 108 138-264 178-296 (416)
150 1q7f_A NHL, brain tumor CG1071 90.7 6.4 0.00022 32.6 22.4 137 102-264 100-240 (286)
151 1jmx_B Amine dehydrogenase; ox 90.6 7.2 0.00025 33.1 16.9 56 102-168 21-78 (349)
152 3mkq_A Coatomer beta'-subunit; 90.6 10 0.00034 36.9 16.7 134 103-264 78-219 (814)
153 1vyh_C Platelet-activating fac 90.5 8.9 0.00031 33.9 17.5 133 103-265 131-268 (410)
154 2pm7_B Protein transport prote 90.2 6.5 0.00022 32.9 13.4 106 137-263 20-133 (297)
155 1sq9_A Antiviral protein SKI8; 90.2 8.6 0.00029 33.4 16.5 67 186-264 197-269 (397)
156 3v65_B Low-density lipoprotein 90.2 9.4 0.00032 33.7 22.0 146 136-336 169-320 (386)
157 3vl1_A 26S proteasome regulato 90.0 9.3 0.00032 33.5 19.7 93 103-215 120-215 (420)
158 4a11_B DNA excision repair pro 90.0 5.8 0.0002 34.5 13.3 104 137-263 111-219 (408)
159 1yr2_A Prolyl oligopeptidase; 90.0 15 0.0005 35.6 17.2 104 154-268 293-401 (741)
160 1pby_B Quinohemoprotein amine 89.9 3.6 0.00012 34.8 11.6 106 155-266 11-128 (337)
161 3lrv_A PRE-mRNA-splicing facto 89.9 7.3 0.00025 33.4 13.7 26 308-337 179-204 (343)
162 1ijq_A LDL receptor, low-densi 89.8 8.6 0.00029 32.8 22.5 147 136-336 87-240 (316)
163 1npe_A Nidogen, entactin; glyc 89.8 7.4 0.00025 32.0 18.3 107 137-264 47-157 (267)
164 3u4y_A Uncharacterized protein 89.8 4.2 0.00015 34.4 12.0 108 137-267 9-122 (331)
165 4gga_A P55CDC, cell division c 89.7 9.1 0.00031 33.9 14.5 93 155-263 125-219 (420)
166 3oyo_A Hemopexin fold protein 89.7 7.2 0.00025 31.6 12.7 147 136-334 12-198 (225)
167 3i2n_A WD repeat-containing pr 89.5 9 0.00031 32.5 14.3 138 103-265 45-202 (357)
168 1su3_A Interstitial collagenas 89.3 5.6 0.00019 36.1 12.6 156 130-340 265-438 (450)
169 4gga_A P55CDC, cell division c 89.1 6.1 0.00021 35.1 12.9 95 102-214 125-220 (420)
170 3c7x_A Matrix metalloproteinas 89.1 7.2 0.00024 30.9 13.1 149 132-336 10-177 (196)
171 2bkl_A Prolyl endopeptidase; m 89.1 6.1 0.00021 38.0 13.6 104 154-268 251-357 (695)
172 1flg_A Protein (quinoprotein e 88.9 9.4 0.00032 35.9 14.3 117 133-267 64-200 (582)
173 2xdw_A Prolyl endopeptidase; a 88.8 17 0.00059 34.9 17.7 147 102-270 259-424 (710)
174 2fp8_A Strictosidine synthase; 88.6 10 0.00036 32.1 15.9 142 102-262 40-216 (322)
175 2hz6_A Endoplasmic reticulum t 88.5 0.56 1.9E-05 41.5 5.4 128 103-267 20-156 (369)
176 3ott_A Two-component system se 88.2 20 0.00067 34.8 22.5 136 103-271 83-229 (758)
177 3bg1_A Protein SEC13 homolog; 87.8 3.1 0.00011 35.4 9.6 113 137-270 24-145 (316)
178 3v64_C Agrin; beta propeller, 87.7 13 0.00045 32.2 23.8 173 103-336 96-277 (349)
179 3v65_B Low-density lipoprotein 87.5 14 0.00049 32.5 18.2 132 103-264 97-236 (386)
180 2hes_X YDR267CP; beta-propelle 87.4 4.8 0.00016 34.4 10.6 72 137-221 118-193 (330)
181 1qks_A Cytochrome CD1 nitrite 87.3 19 0.00066 33.7 17.5 104 154-271 319-435 (567)
182 3hrp_A Uncharacterized protein 87.2 15 0.00052 32.6 14.1 109 136-268 140-255 (409)
183 2vdu_B TRNA (guanine-N(7)-)-me 87.0 8 0.00027 34.7 12.3 150 138-338 115-275 (450)
184 4a11_B DNA excision repair pro 87.0 14 0.00049 31.9 18.5 91 102-213 122-219 (408)
185 2pbi_B Guanine nucleotide-bind 86.9 14 0.00049 31.8 14.3 105 138-264 210-317 (354)
186 3scy_A Hypothetical bacterial 86.9 11 0.00036 32.5 12.7 74 186-272 221-303 (361)
187 3odt_A Protein DOA1; ubiquitin 86.9 12 0.00042 30.9 14.9 94 136-243 27-122 (313)
188 2ynn_A Coatomer subunit beta'; 86.8 6.5 0.00022 33.1 11.0 103 137-263 24-129 (304)
189 3iuj_A Prolyl endopeptidase; h 86.7 23 0.00078 34.0 17.0 147 102-271 259-414 (693)
190 1pgu_A Actin interacting prote 86.7 20 0.00068 33.2 16.2 27 310-340 263-289 (615)
191 2pbi_B Guanine nucleotide-bind 86.6 15 0.00051 31.7 14.9 92 155-264 176-273 (354)
192 2hes_X YDR267CP; beta-propelle 86.6 14 0.00048 31.4 17.4 146 103-271 35-193 (330)
193 3m0c_C LDL receptor, low-densi 86.6 26 0.00088 34.4 23.1 146 136-335 481-633 (791)
194 4ggc_A P55CDC, cell division c 86.4 13 0.00045 30.8 15.3 55 103-167 46-101 (318)
195 1pgu_A Actin interacting prote 86.1 21 0.00073 33.0 17.8 103 138-263 456-573 (615)
196 3i2n_A WD repeat-containing pr 86.0 5 0.00017 34.2 10.1 106 139-264 32-150 (357)
197 1sq9_A Antiviral protein SKI8; 85.9 16 0.00056 31.5 17.7 61 139-212 82-157 (397)
198 3hrp_A Uncharacterized protein 85.9 18 0.00063 32.1 19.3 136 102-263 152-299 (409)
199 3iz6_a 40S ribosomal protein R 85.9 17 0.00058 31.6 18.8 181 103-335 181-376 (380)
200 3g4e_A Regucalcin; six bladed 85.7 11 0.00038 31.5 11.9 107 137-261 24-138 (297)
201 2bkl_A Prolyl endopeptidase; m 85.6 12 0.00041 35.9 13.3 150 102-270 252-405 (695)
202 4ggc_A P55CDC, cell division c 85.5 15 0.0005 30.6 13.5 81 155-243 45-127 (318)
203 1gen_A Gelatinase A; hydrolase 85.5 13 0.00044 29.9 15.2 152 130-336 33-204 (218)
204 3sfz_A APAF-1, apoptotic pepti 85.5 9.2 0.00032 39.4 13.2 177 103-336 984-1160(1249)
205 3k26_A Polycomb protein EED; W 85.4 16 0.00055 31.0 16.6 139 103-264 45-194 (366)
206 3zwl_B Eukaryotic translation 85.3 8.1 0.00028 32.9 11.1 107 137-263 43-152 (369)
207 1yfq_A Cell cycle arrest prote 85.2 16 0.00054 30.8 15.7 90 103-212 34-131 (342)
208 1qhu_A Protein (hemopexin); be 85.2 22 0.00075 32.3 17.4 48 103-166 168-217 (460)
209 3pe7_A Oligogalacturonate lyas 85.1 18 0.00061 31.2 17.9 154 102-270 60-233 (388)
210 2vdu_B TRNA (guanine-N(7)-)-me 84.9 21 0.00072 31.8 20.8 106 137-265 160-274 (450)
211 2z3z_A Dipeptidyl aminopeptida 84.7 28 0.00096 33.1 21.7 153 154-340 234-397 (706)
212 3fvz_A Peptidyl-glycine alpha- 84.7 18 0.0006 30.8 23.0 141 103-267 70-232 (329)
213 1yr2_A Prolyl oligopeptidase; 84.6 30 0.001 33.4 17.7 148 102-270 294-449 (741)
214 2pm7_B Protein transport prote 84.4 17 0.00057 30.3 16.2 63 138-213 67-133 (297)
215 3hxj_A Pyrrolo-quinoline quino 84.3 17 0.00059 30.4 13.7 126 103-267 118-250 (330)
216 1flg_A Protein (quinoprotein e 84.2 28 0.00095 32.7 16.6 72 181-268 63-144 (582)
217 3dr2_A Exported gluconolactona 84.0 17 0.0006 30.4 12.4 100 154-268 168-273 (305)
218 2ecf_A Dipeptidyl peptidase IV 83.9 31 0.0011 33.0 19.1 62 204-269 264-328 (741)
219 1qks_A Cytochrome CD1 nitrite 83.8 28 0.00096 32.6 14.6 92 102-215 177-278 (567)
220 3o4h_A Acylamino-acid-releasin 83.7 9.8 0.00033 35.4 11.5 99 104-218 134-233 (582)
221 1got_B GT-beta; complex (GTP-b 83.6 20 0.00068 30.5 19.0 134 103-264 78-217 (340)
222 3frx_A Guanine nucleotide-bind 83.4 19 0.00066 30.3 13.4 65 137-216 76-142 (319)
223 3iuj_A Prolyl endopeptidase; h 83.1 33 0.0011 32.8 18.3 103 155-269 259-366 (693)
224 3k26_A Polycomb protein EED; W 83.1 20 0.0007 30.3 13.3 63 187-265 85-150 (366)
225 4h5i_A Guanine nucleotide-exch 83.0 22 0.00077 30.7 19.3 180 103-335 158-344 (365)
226 3p5b_L Low density lipoprotein 82.7 25 0.00086 31.1 20.7 146 136-335 169-321 (400)
227 3gre_A Serine/threonine-protei 82.2 26 0.00089 30.9 15.8 107 137-264 181-294 (437)
228 3ott_A Two-component system se 81.3 41 0.0014 32.5 20.2 105 137-269 73-181 (758)
229 1nir_A Nitrite reductase; hemo 81.2 34 0.0012 31.7 19.1 105 154-271 301-416 (543)
230 3ba0_A Macrophage metalloelast 80.9 28 0.00096 30.5 14.9 157 130-340 183-356 (365)
231 3lp9_A LS-24; SEED albumin, pl 80.9 5 0.00017 32.6 7.2 21 309-335 182-202 (227)
232 1n7d_A LDL receptor, low-densi 80.9 20 0.0007 34.5 12.7 138 102-266 475-618 (699)
233 3iz6_a 40S ribosomal protein R 80.8 27 0.00093 30.2 14.0 143 155-337 180-332 (380)
234 3sfz_A APAF-1, apoptotic pepti 80.8 17 0.00058 37.4 12.9 104 137-265 626-735 (1249)
235 3m0c_C LDL receptor, low-densi 80.7 45 0.0015 32.7 17.4 133 103-263 494-633 (791)
236 1itv_A MMP9; adaptive molecula 80.6 19 0.00065 28.3 12.5 99 137-264 64-176 (195)
237 1yfq_A Cell cycle arrest prote 80.3 25 0.00086 29.5 16.8 90 103-212 80-179 (342)
238 3hxj_A Pyrrolo-quinoline quino 80.2 25 0.00085 29.4 13.0 85 136-241 106-194 (330)
239 3o4h_A Acylamino-acid-releasin 80.1 37 0.0013 31.4 17.1 139 155-338 90-231 (582)
240 3fvz_A Peptidyl-glycine alpha- 79.9 27 0.00092 29.6 23.1 123 132-267 147-282 (329)
241 2ghs_A AGR_C_1268P; regucalcin 79.7 27 0.00093 29.6 12.2 66 186-270 60-126 (326)
242 2pm9_A Protein WEB1, protein t 79.3 31 0.0011 29.9 14.8 96 155-264 45-147 (416)
243 3oyo_A Hemopexin fold protein 79.2 23 0.0008 28.5 12.5 104 132-262 64-198 (225)
244 3v64_C Agrin; beta propeller, 78.9 31 0.0011 29.8 19.9 134 103-268 54-197 (349)
245 3tc9_A Hypothetical hydrolase; 78.5 20 0.00068 32.2 11.2 108 137-267 149-262 (430)
246 2xyi_A Probable histone-bindin 77.0 13 0.00045 33.0 9.6 104 137-262 243-353 (430)
247 2ecf_A Dipeptidyl peptidase IV 76.7 54 0.0018 31.3 15.4 107 103-219 264-375 (741)
248 3mmy_A MRNA export factor; mRN 76.5 17 0.0006 30.7 10.0 67 187-267 54-122 (368)
249 3zwl_B Eukaryotic translation 75.1 36 0.0012 28.6 17.2 96 103-213 55-152 (369)
250 2xyi_A Probable histone-bindin 73.5 19 0.00064 32.0 9.6 61 189-263 196-264 (430)
251 3ju4_A Endo-N-acetylneuraminid 71.2 56 0.0019 29.0 18.6 115 128-244 284-407 (670)
252 2gop_A Trilobed protease; beta 71.0 46 0.0016 28.0 13.3 147 101-268 42-213 (347)
253 3f3f_A Nucleoporin SEH1; struc 70.9 25 0.00084 29.3 9.5 64 186-263 22-91 (351)
254 3ju4_A Endo-N-acetylneuraminid 70.2 59 0.002 28.9 12.8 128 164-320 269-407 (670)
255 3lrv_A PRE-mRNA-splicing facto 69.9 50 0.0017 27.9 19.1 65 186-264 138-203 (343)
256 4aow_A Guanine nucleotide-bind 69.5 48 0.0016 27.6 13.6 31 304-338 260-290 (340)
257 1ck7_A Protein (gelatinase A); 69.0 74 0.0025 30.2 12.6 154 130-336 446-617 (631)
258 3sjl_D Methylamine dehydrogena 68.9 27 0.00093 30.8 9.3 112 137-264 237-365 (386)
259 4a0p_A LRP6, LRP-6, low-densit 68.6 81 0.0028 29.9 23.7 201 103-336 16-239 (628)
260 2xbg_A YCF48-like protein; pho 68.1 55 0.0019 27.8 20.7 140 104-270 58-201 (327)
261 2ynn_A Coatomer subunit beta'; 68.1 51 0.0017 27.3 17.1 134 103-264 78-219 (304)
262 1hxn_A Hemopexin, HPX; heme, b 66.8 48 0.0016 26.6 11.4 93 132-243 67-188 (219)
263 3b7f_A Glycosyl hydrolase, BNR 66.7 65 0.0022 28.1 19.9 144 103-270 32-216 (394)
264 2p4o_A Hypothetical protein; p 66.3 57 0.0019 27.2 17.2 137 103-268 96-247 (306)
265 2kwv_A RAD30 homolog B, DNA po 66.0 3.2 0.00011 23.8 1.7 27 21-47 15-41 (48)
266 3sov_A LRP-6, low-density lipo 65.7 62 0.0021 27.4 22.3 146 136-336 89-240 (318)
267 4h5i_A Guanine nucleotide-exch 64.7 68 0.0023 27.6 14.7 143 155-336 157-302 (365)
268 2ymu_A WD-40 repeat protein; u 64.2 65 0.0022 29.4 11.6 101 137-263 437-540 (577)
269 3gre_A Serine/threonine-protei 62.9 45 0.0015 29.2 9.9 66 186-265 181-248 (437)
270 1hxn_A Hemopexin, HPX; heme, b 62.3 59 0.002 26.0 13.6 102 132-262 22-144 (219)
271 3lp9_A LS-24; SEED albumin, pl 60.0 48 0.0017 26.7 8.5 101 135-263 70-202 (227)
272 1pex_A Collagenase-3, MMP-13; 59.9 63 0.0021 25.6 18.3 100 137-265 79-195 (207)
273 1xfd_A DIP, dipeptidyl aminope 59.9 1.2E+02 0.004 28.7 16.2 109 103-219 38-150 (723)
274 2gop_A Trilobed protease; beta 59.9 76 0.0026 26.5 11.4 103 154-269 151-258 (347)
275 3dm0_A Maltose-binding peripla 59.7 1.2E+02 0.0041 28.7 16.7 105 137-264 483-594 (694)
276 3p5b_L Low density lipoprotein 58.4 96 0.0033 27.2 21.4 131 103-263 93-235 (400)
277 2mad_H Methylamine dehydrogena 58.0 94 0.0032 27.0 12.3 71 186-266 278-354 (373)
278 1k32_A Tricorn protease; prote 57.6 78 0.0027 31.9 11.5 57 203-269 358-416 (1045)
279 2xe4_A Oligopeptidase B; hydro 57.2 1.4E+02 0.0048 28.8 16.2 98 154-260 294-398 (751)
280 2xe4_A Oligopeptidase B; hydro 56.6 1.5E+02 0.005 28.7 17.0 151 101-270 294-466 (751)
281 1xfd_A DIP, dipeptidyl aminope 55.9 1E+02 0.0036 29.1 11.7 61 204-268 229-295 (723)
282 3ba0_A Macrophage metalloelast 55.2 1.1E+02 0.0036 26.7 17.4 102 137-267 236-355 (365)
283 2ece_A 462AA long hypothetical 54.6 1.2E+02 0.0042 27.3 15.7 119 137-263 95-238 (462)
284 3f3f_A Nucleoporin SEH1; struc 54.5 89 0.003 25.7 16.6 107 137-264 22-145 (351)
285 1jof_A Carboxy-CIS,CIS-muconat 54.0 1E+02 0.0035 26.2 15.6 16 155-170 167-183 (365)
286 3mmy_A MRNA export factor; mRN 53.2 99 0.0034 25.8 16.5 101 137-263 97-200 (368)
287 2cn3_A Xyloglucanase, beta-1,4 52.7 1.7E+02 0.0057 28.3 12.6 87 157-243 224-322 (737)
288 1su3_A Interstitial collagenas 52.3 1.3E+02 0.0046 27.0 14.3 101 137-266 318-436 (450)
289 2xbg_A YCF48-like protein; pho 49.1 1.2E+02 0.0041 25.6 18.8 132 110-270 107-243 (327)
290 3dm0_A Maltose-binding peripla 48.2 1.8E+02 0.0062 27.4 18.7 32 304-339 606-637 (694)
291 3tc9_A Hypothetical hydrolase; 47.9 1.1E+02 0.0036 27.3 9.6 133 102-261 159-300 (430)
292 3dw8_B Serine/threonine-protei 46.5 1.5E+02 0.005 25.8 10.7 22 312-337 240-261 (447)
293 2be1_A Serine/threonine-protei 46.1 52 0.0018 28.4 6.9 26 186-216 55-80 (339)
294 3q6k_A 43.2 kDa salivary prote 45.1 1.6E+02 0.0055 25.8 11.3 82 234-340 97-197 (381)
295 2be1_A Serine/threonine-protei 45.0 49 0.0017 28.6 6.6 55 203-266 20-80 (339)
296 1jof_A Carboxy-CIS,CIS-muconat 44.4 1.5E+02 0.005 25.2 11.0 15 203-217 282-297 (365)
297 2p9w_A MAL S 1 allergenic prot 44.0 1.5E+02 0.0053 25.4 14.0 63 137-212 147-215 (334)
298 1nr0_A Actin interacting prote 43.0 2.1E+02 0.0071 26.5 18.9 107 137-264 201-315 (611)
299 3sov_A LRP-6, low-density lipo 42.7 1.5E+02 0.0052 24.9 17.1 107 136-264 132-240 (318)
300 1nr0_A Actin interacting prote 42.1 2.1E+02 0.0073 26.5 15.5 111 189-339 162-275 (611)
301 4hvt_A Ritya.17583.B, post-pro 41.7 2.5E+02 0.0084 27.0 13.5 103 155-267 269-386 (711)
302 4hw6_A Hypothetical protein, I 41.6 1.9E+02 0.0064 25.7 13.1 104 138-265 153-262 (433)
303 1fwx_A Nitrous oxide reductase 40.9 52 0.0018 30.9 6.4 164 103-284 255-452 (595)
304 3frx_A Guanine nucleotide-bind 40.4 1.6E+02 0.0054 24.4 14.7 24 307-334 294-317 (319)
305 3vu4_A KMHSV2; beta-propeller 39.3 1.7E+02 0.006 24.7 18.6 24 308-335 249-272 (355)
306 1fwx_A Nitrous oxide reductase 38.8 1.3E+02 0.0043 28.4 8.6 71 137-214 101-186 (595)
307 2ymu_A WD-40 repeat protein; u 36.8 2.4E+02 0.0082 25.5 15.2 100 137-262 314-416 (577)
308 3c75_H MADH, methylamine dehyd 36.7 2E+02 0.0067 25.7 9.4 71 186-266 330-406 (426)
309 2cn3_A Xyloglucanase, beta-1,4 35.8 3E+02 0.01 26.4 12.2 62 212-273 231-294 (737)
310 3c7x_A Matrix metalloproteinas 35.2 1.6E+02 0.0054 22.9 11.3 102 136-264 60-177 (196)
311 2mad_H Methylamine dehydrogena 34.6 2.2E+02 0.0076 24.5 19.4 60 102-168 97-160 (373)
312 2xzm_R RACK1; ribosome, transl 32.3 2.2E+02 0.0075 23.7 19.6 62 137-213 87-150 (343)
313 4hvt_A Ritya.17583.B, post-pro 31.3 3.6E+02 0.012 25.9 12.2 150 102-271 269-438 (711)
314 3c75_H MADH, methylamine dehyd 28.3 3.2E+02 0.011 24.3 14.7 61 102-168 149-213 (426)
315 3b7f_A Glycosyl hydrolase, BNR 28.2 2.9E+02 0.0098 23.8 19.6 143 103-270 82-270 (394)
316 1k32_A Tricorn protease; prote 26.0 5.1E+02 0.017 25.9 18.9 112 103-220 34-151 (1045)
317 2ece_A 462AA long hypothetical 25.6 3.7E+02 0.013 24.2 9.8 69 186-264 95-175 (462)
318 2qe8_A Uncharacterized protein 25.6 3E+02 0.01 23.1 14.8 126 186-340 27-161 (343)
319 2oiz_A Aromatic amine dehydrog 25.4 2.3E+02 0.0078 24.1 7.8 72 137-219 265-341 (361)
320 3dw8_B Serine/threonine-protei 24.9 3.3E+02 0.011 23.4 11.7 29 233-269 352-380 (447)
321 2oit_A Nucleoporin 214KDA; NH2 24.2 3.7E+02 0.013 23.6 14.0 60 138-212 162-223 (434)
322 4a5s_A Dipeptidyl peptidase 4 22.2 5.1E+02 0.017 24.6 15.3 57 204-264 229-296 (740)
323 2oaj_A Protein SNI1; WD40 repe 21.7 5.8E+02 0.02 25.1 12.1 158 128-336 19-184 (902)
No 1
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=288.11 Aligned_cols=254 Identities=17% Similarity=0.176 Sum_probs=214.5
Q ss_pred ccceEEEEeeccCCCCCCCCCCCCCcceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEECCEEEEEcCcCCCCCCCcc
Q 018336 76 THKVACLVQSFPVHSGSGELKPMGLSYGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASSQGKLVVMGGWDPASYSPVS 155 (358)
Q Consensus 76 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~Gg~~~~~~~~~~ 155 (358)
....+|++||... ..+++.||+.+++|..++++|.++ ..+++++.++.||++||.. ....+
T Consensus 10 ~~~~l~~~GG~~~------------~~~~~~~d~~~~~W~~~~~~p~~r----~~~~~~~~~~~lyv~GG~~---~~~~~ 70 (306)
T 3ii7_A 10 KHDYRIALFGGSQ------------PQSCRYFNPKDYSWTDIRCPFEKR----RDAACVFWDNVVYILGGSQ---LFPIK 70 (306)
T ss_dssp CCCEEEEEECCSS------------TTSEEEEETTTTEEEECCCCSCCC----BSCEEEEETTEEEEECCBS---SSBCC
T ss_pred ccceEEEEeCCCC------------CceEEEecCCCCCEecCCCCCccc----ceeEEEEECCEEEEEeCCC---CCCcc
Confidence 3468889988633 357999999999999999988764 4568888999999999987 24578
Q ss_pred eeEEEECCCCcEEeCCCCCCCceeeeeEEECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEEECC
Q 018336 156 HVFVYDFTTRRWTRGKNMPDNRSFFAAGELNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVVIGS 235 (358)
Q Consensus 156 ~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~~~ 235 (358)
++++||+.+++|+.++++|.+|..|+++.++++||++||.+......+++++||+.+++|+.++++|.+|..++++++++
T Consensus 71 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~ 150 (306)
T 3ii7_A 71 RMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANG 150 (306)
T ss_dssp EEEEEETTTTEEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETT
T ss_pred eEEEEeCCCCeEEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECC
Confidence 99999999999999999999999999999999999999987555668899999999999999999999999999999999
Q ss_pred EEEEEeCcccCCC-CceeeeeEEEECCCCceEEcCCccccCCCCCceeee--------------------eecCccCcee
Q 018336 236 EFWVVSGYKTERQ-GIFDESAESYQLGTGEWKRAENAWKLSQCPRSNVGV--------------------GREGKLFCWA 294 (358)
Q Consensus 236 ~lyv~gG~~~~~~-~~~~~~i~~yd~~~~~W~~~~~~p~~~~~~~~~~~~--------------------~~d~~~~~W~ 294 (358)
+||++||...... +...+++++||+.+++|+.++.+|.+. ..++.+.. .||+++++|.
T Consensus 151 ~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~ 229 (306)
T 3ii7_A 151 LIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEAR-KNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWK 229 (306)
T ss_dssp EEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCC-BSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEE
T ss_pred EEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchh-hcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEE
Confidence 9999999865432 234789999999999999999876421 22222211 7999999997
Q ss_pred ccccc--eeeceEEEEeCCeEEEECCCCCCCC-ceEEEEECCCCceEee-cCCCCccCc
Q 018336 295 ETEAA--VQFGTCRVELGGCTLVTGSGYQGGP-QEFYVVEGRNGKFRKF-DVPAEYKGL 349 (358)
Q Consensus 295 ~lp~~--~r~~~~~~~~~~~i~v~gG~~~~~~-~~i~~yd~~~~~W~~~-~~p~~~~~~ 349 (358)
.++.. .|..++++.++++|||+||...... +++++||+++++|+++ .+|..+.++
T Consensus 230 ~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~ 288 (306)
T 3ii7_A 230 MVSPMPWKGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDKWVANSKVRAFPVTS 288 (306)
T ss_dssp ECCCCSCCBSCCEEEEETTEEEEEECBCSSSBCCEEEEEETTTTEEEEEEEEECCSCTT
T ss_pred ECCCCCCCccceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCCccccccee
Confidence 77655 4678889999999999999865544 8999999999999999 888887777
No 2
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=2.8e-39 Score=285.64 Aligned_cols=260 Identities=20% Similarity=0.277 Sum_probs=214.1
Q ss_pred ccceEEEEeeccCCCCCCCCCCCCCcceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEECCEEEEEcCcCCCCCCCcc
Q 018336 76 THKVACLVQSFPVHSGSGELKPMGLSYGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASSQGKLVVMGGWDPASYSPVS 155 (358)
Q Consensus 76 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~Gg~~~~~~~~~~ 155 (358)
.+..+|++||.... ...++++||+.+++|..++++|.++ ..++++..++.||++||..+.. ..+
T Consensus 14 ~~~~i~v~GG~~~~----------~~~~~~~~d~~~~~W~~~~~~p~~r----~~~~~~~~~~~lyv~GG~~~~~--~~~ 77 (302)
T 2xn4_A 14 LPKLMVVVGGQAPK----------AIRSVECYDFKEERWHQVAELPSRR----CRAGMVYMAGLVFAVGGFNGSL--RVR 77 (302)
T ss_dssp -CEEEEEECCBSSS----------BCCCEEEEETTTTEEEEECCCSSCC----BSCEEEEETTEEEEESCBCSSS--BCC
T ss_pred CCCEEEEECCCCCC----------CCCcEEEEcCcCCcEeEcccCCccc----ccceEEEECCEEEEEeCcCCCc--ccc
Confidence 35678889886431 2457999999999999999888764 4567888899999999986542 478
Q ss_pred eeEEEECCCCcEEeCCCCCCCceeeeeEEECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEEECC
Q 018336 156 HVFVYDFTTRRWTRGKNMPDNRSFFAAGELNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVVIGS 235 (358)
Q Consensus 156 ~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~~~ 235 (358)
++++||+.+++|+.++++|.+|..|+++.++++||++||.+.. ...+++++||+.+++|+.++++|.+|..++++++++
T Consensus 78 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~ 156 (302)
T 2xn4_A 78 TVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGS-TGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGG 156 (302)
T ss_dssp CEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEECSS-CEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETT
T ss_pred ceEEECCCCCceeeCCCCCccccceEEEEECCEEEEEcCCCCC-ccCceEEEEeCCCCeEeecCCCCCcccCceEEEECC
Confidence 9999999999999999999999999999999999999998754 456889999999999999999999999999999999
Q ss_pred EEEEEeCcccCCCCceeeeeEEEECCCCceEEcCCccccCCCCCceeee--------------------eecCccCceec
Q 018336 236 EFWVVSGYKTERQGIFDESAESYQLGTGEWKRAENAWKLSQCPRSNVGV--------------------GREGKLFCWAE 295 (358)
Q Consensus 236 ~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~~~p~~~~~~~~~~~~--------------------~~d~~~~~W~~ 295 (358)
+||++||..... ....+++++||+.+++|+.++.+|.+. ..++.+.. .||+++++|..
T Consensus 157 ~iyv~GG~~~~~-~~~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 234 (302)
T 2xn4_A 157 LLYAVGGYDVAS-RQCLSTVECYNATTNEWTYIAEMSTRR-SGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQ 234 (302)
T ss_dssp EEEEECCEETTT-TEECCCEEEEETTTTEEEEECCCSSCC-BSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEE
T ss_pred EEEEEeCCCCCC-CccccEEEEEeCCCCcEEECCCCcccc-ccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEee
Confidence 999999986542 134678999999999999998876421 22222211 79999999977
Q ss_pred cccc--eeeceEEEEeCCeEEEECCCCCCCC-ceEEEEECCCCceEee--cCCCCccCceeeeeEE
Q 018336 296 TEAA--VQFGTCRVELGGCTLVTGSGYQGGP-QEFYVVEGRNGKFRKF--DVPAEYKGLVQSGCCV 356 (358)
Q Consensus 296 lp~~--~r~~~~~~~~~~~i~v~gG~~~~~~-~~i~~yd~~~~~W~~~--~~p~~~~~~~~~~~~~ 356 (358)
++.. .|..++++.++++|||+||...... +++++||+++++|+.+ .+|.++..+ ++|.+
T Consensus 235 ~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~r~~~--~~~~~ 298 (302)
T 2xn4_A 235 VADMNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVSSCMSTGRSYA--GVTVI 298 (302)
T ss_dssp ECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECSSCCSSCCBSC--EEEEE
T ss_pred CCCCCCccccCeEEEECCEEEEECCcCCCcccccEEEEcCCCCeEEECCcccCcccccc--eEEEe
Confidence 7654 4678889999999999999865443 8899999999999999 578777776 55544
No 3
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=3.1e-39 Score=286.11 Aligned_cols=260 Identities=16% Similarity=0.193 Sum_probs=214.7
Q ss_pred CccceEEEEeeccCCCCCCCCCCCCCcceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEECCEEEEEcCcCC--CCCC
Q 018336 75 KTHKVACLVQSFPVHSGSGELKPMGLSYGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASSQGKLVVMGGWDP--ASYS 152 (358)
Q Consensus 75 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~Gg~~~--~~~~ 152 (358)
..+..+|++||... . ...++++||+.+++|..++++|.++ ..++++..++.||++||... ....
T Consensus 22 ~~~~~i~v~GG~~~-~---------~~~~~~~~d~~~~~W~~~~~~p~~r----~~~~~~~~~~~lyv~GG~~~~~~~~~ 87 (308)
T 1zgk_A 22 KVGRLIYTAGGYFR-Q---------SLSYLEAYNPSNGTWLRLADLQVPR----SGLAGCVVGGLLYAVGGRNNSPDGNT 87 (308)
T ss_dssp CCCCCEEEECCBSS-S---------BCCCEEEEETTTTEEEECCCCSSCC----BSCEEEEETTEEEEECCEEEETTEEE
T ss_pred CCCCEEEEEeCcCC-C---------CcceEEEEcCCCCeEeECCCCCccc----ccceEEEECCEEEEECCCcCCCCCCe
Confidence 34668889988621 1 3467999999999999999888764 45688888999999999731 1113
Q ss_pred CcceeEEEECCCCcEEeCCCCCCCceeeeeEEECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEE
Q 018336 153 PVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGELNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVV 232 (358)
Q Consensus 153 ~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~ 232 (358)
..+++++||+.+++|+.++++|.+|..|+++.++++||++||.+.. ...+++++||+.+++|+.++++|.+|..+++++
T Consensus 88 ~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~ 166 (308)
T 1zgk_A 88 DSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGC-IHHNSVERYEPERDEWHLVAPMLTRRIGVGVAV 166 (308)
T ss_dssp ECCCEEEEETTTTEEEECCCCSSCCBTCEEEEETTEEEEECCEETT-EECCCEEEEETTTTEEEECCCCSSCCBSCEEEE
T ss_pred ecceEEEECCCCCeEeECCCCCcCccccEEEEECCEEEEEcCCCCC-cccccEEEECCCCCeEeECCCCCccccceEEEE
Confidence 4678999999999999999999999999999999999999998764 457889999999999999999999999999999
Q ss_pred ECCEEEEEeCcccCCCCceeeeeEEEECCCCceEEcCCccccCCCCCceeee--------------------eecCccCc
Q 018336 233 IGSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRAENAWKLSQCPRSNVGV--------------------GREGKLFC 292 (358)
Q Consensus 233 ~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~~~p~~~~~~~~~~~~--------------------~~d~~~~~ 292 (358)
++++||++||..... ..+++++||+.+++|+.++.+|.+. ..++.+.. .||+++++
T Consensus 167 ~~~~iyv~GG~~~~~---~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 167 LNRLLYAVGGFDGTN---RLNSAECYYPERNEWRMITAMNTIR-SGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETET 242 (308)
T ss_dssp ETTEEEEECCBCSSC---BCCCEEEEETTTTEEEECCCCSSCC-BSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred ECCEEEEEeCCCCCC---cCceEEEEeCCCCeEeeCCCCCCcc-ccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCc
Confidence 999999999987543 3778999999999999999876421 22222111 79999999
Q ss_pred eeccccc--eeeceEEEEeCCeEEEECCCCCCCC-ceEEEEECCCCceEee-cCCCCccCceeeeeE
Q 018336 293 WAETEAA--VQFGTCRVELGGCTLVTGSGYQGGP-QEFYVVEGRNGKFRKF-DVPAEYKGLVQSGCC 355 (358)
Q Consensus 293 W~~lp~~--~r~~~~~~~~~~~i~v~gG~~~~~~-~~i~~yd~~~~~W~~~-~~p~~~~~~~~~~~~ 355 (358)
|..+++. .|..++++.++++|||+||...... +++++||+++++|+++ .+|.++..+ ++|+
T Consensus 243 W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~--~~~~ 307 (308)
T 1zgk_A 243 WTFVAPMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRMTSGRSGV--GVAV 307 (308)
T ss_dssp EEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSC--EEEE
T ss_pred EEECCCCCCCccceEEEEECCEEEEEcCcCCCcccceEEEEcCCCCEEeecCCCCCCcccc--eeEe
Confidence 9777654 4678889999999999999875543 8999999999999999 899888777 4443
No 4
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=281.36 Aligned_cols=260 Identities=18% Similarity=0.264 Sum_probs=215.4
Q ss_pred ccceEEEEeeccCCCCCCCCCCCCCcceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEECCEEEEEcCcCCCCCCCcc
Q 018336 76 THKVACLVQSFPVHSGSGELKPMGLSYGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASSQGKLVVMGGWDPASYSPVS 155 (358)
Q Consensus 76 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~Gg~~~~~~~~~~ 155 (358)
.+..+|++||..... ....++++||+.+++|..++.+|.++ ..++++..++.||++||..+. ...+
T Consensus 13 ~~~~i~~~GG~~~~~--------~~~~~~~~~d~~~~~W~~~~~~p~~r----~~~~~~~~~~~l~v~GG~~~~--~~~~ 78 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQQ--------SPIDVVEKYDPKTQEWSFLPSITRKR----RYVASVSLHDRIYVIGGYDGR--SRLS 78 (301)
T ss_dssp CCEEEEEECCEETTT--------EECCCEEEEETTTTEEEECCCCSSCC----BSCEEEEETTEEEEECCBCSS--CBCC
T ss_pred CCCEEEEEeCccCCC--------cceeEEEEEcCCCCeEEeCCCCChhh----ccccEEEECCEEEEEcCCCCC--ccCc
Confidence 456788888832211 13568999999999999999888754 456888899999999998643 3578
Q ss_pred eeEEEECCCCc---EEeCCCCCCCceeeeeEEECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEE
Q 018336 156 HVFVYDFTTRR---WTRGKNMPDNRSFFAAGELNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVV 232 (358)
Q Consensus 156 ~~~~yd~~t~~---W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~ 232 (358)
++++||+.+++ |+.++++|.+|..|+++.++++||++||.... ...+++++||+.+++|+.++++|.+|..+++++
T Consensus 79 ~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~-~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~ 157 (301)
T 2vpj_A 79 SVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGS-RRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV 157 (301)
T ss_dssp CEEEEETTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSS-CBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE
T ss_pred eEEEEECCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCC-cccceEEEEcCCCCeEEECCCCCCCcccceEEE
Confidence 99999999999 99999999999999999999999999998754 457899999999999999999999999999999
Q ss_pred ECCEEEEEeCcccCCCCceeeeeEEEECCCCceEEcCCccccCCCCCceeee--------------------eecCccCc
Q 018336 233 IGSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRAENAWKLSQCPRSNVGV--------------------GREGKLFC 292 (358)
Q Consensus 233 ~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~~~p~~~~~~~~~~~~--------------------~~d~~~~~ 292 (358)
++++||++||..... ..+++++||+.+++|+.++.+|.+. ..++.+.. .||+++++
T Consensus 158 ~~~~iyv~GG~~~~~---~~~~~~~~d~~~~~W~~~~~~p~~r-~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 233 (301)
T 2vpj_A 158 ASGVIYCLGGYDGLN---ILNSVEKYDPHTGHWTNVTPMATKR-SGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDS 233 (301)
T ss_dssp ETTEEEEECCBCSSC---BCCCEEEEETTTTEEEEECCCSSCC-BSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred ECCEEEEECCCCCCc---ccceEEEEeCCCCcEEeCCCCCccc-ccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCc
Confidence 999999999986543 4789999999999999998876421 12222211 69999999
Q ss_pred eeccccc--eeeceEEEEeCCeEEEECCCCCCCC-ceEEEEECCCCceEee-cCCCCccCceeeeeEE
Q 018336 293 WAETEAA--VQFGTCRVELGGCTLVTGSGYQGGP-QEFYVVEGRNGKFRKF-DVPAEYKGLVQSGCCV 356 (358)
Q Consensus 293 W~~lp~~--~r~~~~~~~~~~~i~v~gG~~~~~~-~~i~~yd~~~~~W~~~-~~p~~~~~~~~~~~~~ 356 (358)
|..++.. .|..++++.++++|||+||...... +++++||+++++|+.+ .+|.++..+ ++|.+
T Consensus 234 W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~--~~~~~ 299 (301)
T 2vpj_A 234 WTTVTSMTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVTSMGTQRCDA--GVCVL 299 (301)
T ss_dssp EEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTTEEEEEEEEEEEEESC--EEEEE
T ss_pred EEECCCCCCcccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCCeEEEcCCCCcccccc--eEEEe
Confidence 9777644 4678889999999999999865544 8999999999999999 888887777 55654
No 5
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=3.2e-38 Score=280.51 Aligned_cols=250 Identities=15% Similarity=0.176 Sum_probs=201.5
Q ss_pred cceEEEEeeccCCCCCCCCCCCCCcceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEECCEEEEEcCcC----CCCCC
Q 018336 77 HKVACLVQSFPVHSGSGELKPMGLSYGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASSQGKLVVMGGWD----PASYS 152 (358)
Q Consensus 77 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~Gg~~----~~~~~ 152 (358)
+..++++|+. ++++|||.+++|.. +++|.+. .+..+++++.++.||++||.. .....
T Consensus 4 ~~~l~~~GG~----------------~~~~yd~~~~~W~~-~~~~~p~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 64 (315)
T 4asc_A 4 QDLIFMISEE----------------GAVAYDPAANECYC-ASLSSQV--PKNHVSLVTKENQVFVAGGLFYNEDNKEDP 64 (315)
T ss_dssp EEEEEEEETT----------------EEEEEETTTTEEEE-EECCCCS--CSSEEEEECTTCCEEEEEEEEECSSCSSSC
T ss_pred ceEEEEEcCC----------------ceEEECCCCCeEec-CCCCCCC--CccceEEEEECCEEEEEcCcccCCCCCccc
Confidence 4578888873 78999999999986 5565432 156778888899999999962 22222
Q ss_pred CcceeEEEECCCCcEEeCCCCCCCceeeeeEEECCEEEEEcCcCC--CCCCCCeEEEEECCCCceEecCCCccCcCceeE
Q 018336 153 PVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGELNGRVIIAGGHDE--NKTALSSAWAYDLIKDEWTELARMTQERDECEA 230 (358)
Q Consensus 153 ~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~--~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~ 230 (358)
..+++++||+.+++|+.++++|.+|..|+++.++++||++||.+. .....+++++||+.+++|+.++++|.+|..+++
T Consensus 65 ~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~ 144 (315)
T 4asc_A 65 MSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTV 144 (315)
T ss_dssp EEEEEEEEETTTTEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEE
T ss_pred cccceEEecCCCCeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeE
Confidence 345699999999999999999999999999999999999999752 345678999999999999999999999999999
Q ss_pred EEECCEEEEEeCcccCCCCceeeeeEEEECCCCceEEcCCccccCCCCCceeee--------------------eecCcc
Q 018336 231 VVIGSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRAENAWKLSQCPRSNVGV--------------------GREGKL 290 (358)
Q Consensus 231 ~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~~~p~~~~~~~~~~~~--------------------~~d~~~ 290 (358)
++++++||++||..... ...+++++||+.+++|+.++.+|.+. ..++.+.. .||+++
T Consensus 145 ~~~~~~iyv~GG~~~~~--~~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~ 221 (315)
T 4asc_A 145 LSHMDLVYVIGGKGSDR--KCLNKMCVYDPKKFEWKELAPMQTAR-SLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITD 221 (315)
T ss_dssp EEETTEEEEECCBCTTS--CBCCCEEEEETTTTEEEECCCCSSCC-BSCEEEEETTEEEEEEEECSSSEEEEEEEEETTT
T ss_pred EEECCEEEEEeCCCCCC--cccceEEEEeCCCCeEEECCCCCCch-hceEEEEECCEEEEEeccCCCCccceEEEEECCC
Confidence 99999999999984322 35789999999999999999886421 22222221 799999
Q ss_pred Cceeccccc--eeeceEEEEeCCeEEEECCCCCC----C------CceEEEEECCCCceEeecCCCCccCc
Q 018336 291 FCWAETEAA--VQFGTCRVELGGCTLVTGSGYQG----G------PQEFYVVEGRNGKFRKFDVPAEYKGL 349 (358)
Q Consensus 291 ~~W~~lp~~--~r~~~~~~~~~~~i~v~gG~~~~----~------~~~i~~yd~~~~~W~~~~~p~~~~~~ 349 (358)
++|..+++. .|..++++.++++|||+||.... + .+++++||+++++|+++ .|.++..+
T Consensus 222 ~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~-~~~~r~~~ 291 (315)
T 4asc_A 222 NKWAPFEAFPQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV-LREIAYAA 291 (315)
T ss_dssp TEEEEECCCSSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE-ESCSSCCS
T ss_pred CeEEECCCCCCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh-ccCCcCcc
Confidence 999777654 57888999999999999998531 1 17899999999999999 45555555
No 6
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=3.5e-37 Score=274.19 Aligned_cols=252 Identities=15% Similarity=0.219 Sum_probs=201.2
Q ss_pred ccceEEEEeeccCCCCCCCCCCCCCcceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEECCEEEEEcCcCCC--C--C
Q 018336 76 THKVACLVQSFPVHSGSGELKPMGLSYGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASSQGKLVVMGGWDPA--S--Y 151 (358)
Q Consensus 76 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~Gg~~~~--~--~ 151 (358)
.+..++++|+. .+++|||.+++|... +++.+. .+..++++..++.||++||.... . .
T Consensus 14 ~~~~i~~~GG~----------------~~~~yd~~~~~W~~~-~~~~~~--~r~~~~~~~~~~~lyv~GG~~~~~~~~~~ 74 (318)
T 2woz_A 14 VKDLILLVNDT----------------AAVAYDPMENECYLT-ALAEQI--PRNHSSIVTQQNQVYVVGGLYVDEENKDQ 74 (318)
T ss_dssp EEEEEEEECSS----------------EEEEEETTTTEEEEE-EECTTS--CSSEEEEECSSSCEEEEESSCC-------
T ss_pred ecchhhhcccc----------------ceEEECCCCCceecc-cCCccC--CccceEEEEECCEEEEECCcccCccccCC
Confidence 34578888874 578999999999883 444322 14567788889999999995311 1 1
Q ss_pred CCcceeEEEECCCCcEEeCCCCCCCceeeeeEEECCEEEEEcCcCC-CCCCCCeEEEEECCCCceEecCCCccCcCceeE
Q 018336 152 SPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGELNGRVIIAGGHDE-NKTALSSAWAYDLIKDEWTELARMTQERDECEA 230 (358)
Q Consensus 152 ~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~ 230 (358)
...+++++||+.+++|+.++++|.+|..|+++.++++||++||... .....+++++||+.+++|+.++++|.+|..+++
T Consensus 75 ~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~ 154 (318)
T 2woz_A 75 PLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNV 154 (318)
T ss_dssp CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEE
T ss_pred CccccEEEEeCCCCcEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEE
Confidence 1234599999999999999999999999999999999999999863 334578999999999999999999999999999
Q ss_pred EEECCEEEEEeCcccCCCCceeeeeEEEECCCCceEEcCCccccCCCCCceeee--------------------eecCcc
Q 018336 231 VVIGSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRAENAWKLSQCPRSNVGV--------------------GREGKL 290 (358)
Q Consensus 231 ~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~~~p~~~~~~~~~~~~--------------------~~d~~~ 290 (358)
++++++||++||..... ...+++++||+.+++|+.++.+|.+. ..++.+.. .||+++
T Consensus 155 ~~~~~~iyv~GG~~~~~--~~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~ 231 (318)
T 2woz_A 155 ISHNGMIYCLGGKTDDK--KCTNRVFIYNPKKGDWKDLAPMKTPR-SMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKT 231 (318)
T ss_dssp EEETTEEEEECCEESSS--CBCCCEEEEETTTTEEEEECCCSSCC-BSCEEEEETTEEEEEEEEETTEEEEEEEEEETTT
T ss_pred EEECCEEEEEcCCCCCC--CccceEEEEcCCCCEEEECCCCCCCc-ccceEEEECCEEEEEcCcCCCCccceEEEEECCC
Confidence 99999999999985332 34788999999999999999876321 22222111 799999
Q ss_pred Cceeccccc--eeeceEEEEeCCeEEEECCCCCC---------C-CceEEEEECCCCceEeecCCCCccCce
Q 018336 291 FCWAETEAA--VQFGTCRVELGGCTLVTGSGYQG---------G-PQEFYVVEGRNGKFRKFDVPAEYKGLV 350 (358)
Q Consensus 291 ~~W~~lp~~--~r~~~~~~~~~~~i~v~gG~~~~---------~-~~~i~~yd~~~~~W~~~~~p~~~~~~~ 350 (358)
++|..+++. .|..++++.++++|||+||.... . .+++++||+++++|+++ +|..+..+.
T Consensus 232 ~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~-~~~~r~~~~ 302 (318)
T 2woz_A 232 NKWEVMTEFPQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM-LKEIRYASG 302 (318)
T ss_dssp CCEEECCCCSSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE-ESCCGGGTT
T ss_pred CeEEECCCCCCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh-ccccccccc
Confidence 999777654 47888999999999999998642 1 27899999999999999 677776663
No 7
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=4.5e-34 Score=258.21 Aligned_cols=247 Identities=13% Similarity=0.137 Sum_probs=190.5
Q ss_pred cceEEEEeeccCCCCCCCCCCCCCcceEEEEeCC--CCCeeecCCCC-CCCCCCCceeEEEEECCEEEEEcCc-C--CCC
Q 018336 77 HKVACLVQSFPVHSGSGELKPMGLSYGVTVFDPV--SLTWDRLGPVP-EYPAGLPLFCQVASSQGKLVVMGGW-D--PAS 150 (358)
Q Consensus 77 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~--~~~W~~~~~~~-~~~~~~~~~~~~~~~~~~lyv~Gg~-~--~~~ 150 (358)
+..+|++||.. ..++++||+. +++|..++++| .+ +..+++++++++||++||. . ...
T Consensus 19 ~~~iyv~GG~~-------------~~~~~~~d~~~~~~~W~~~~~~p~~~----R~~~~~~~~~~~lyv~GG~~~~~~~~ 81 (357)
T 2uvk_A 19 NDTVYIGLGSA-------------GTAWYKLDTQAKDKKWTALAAFPGGP----RDQATSAFIDGNLYVFGGIGKNSEGL 81 (357)
T ss_dssp TTEEEEECGGG-------------TTCEEEEETTSSSCCEEECCCCTTCC----CBSCEEEEETTEEEEECCEEECTTSC
T ss_pred CCEEEEEeCcC-------------CCeEEEEccccCCCCeeECCCCCCCc----CccceEEEECCEEEEEcCCCCCCCcc
Confidence 67889999863 2378999998 49999999988 54 4567888999999999998 2 112
Q ss_pred CCCcceeEEEECCCCcEEeCCCCC-CCceeeeeEEECCEEEEEcCcCCCC------------------------------
Q 018336 151 YSPVSHVFVYDFTTRRWTRGKNMP-DNRSFFAAGELNGRVIIAGGHDENK------------------------------ 199 (358)
Q Consensus 151 ~~~~~~~~~yd~~t~~W~~~~~~~-~~~~~~~~~~~~~~iyv~GG~~~~~------------------------------ 199 (358)
...++++++||+.+++|+.+++++ .+|..|+++.++++||++||.+...
T Consensus 82 ~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (357)
T 2uvk_A 82 TQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKA 161 (357)
T ss_dssp EEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCG
T ss_pred ceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccc
Confidence 235789999999999999999988 8899999999999999999976421
Q ss_pred ---CCCCeEEEEECCCCceEecCCCccCcCc-eeEEEECCEEEEEeCcccCCCCceeeeeEEEEC--CCCceEEcCCccc
Q 018336 200 ---TALSSAWAYDLIKDEWTELARMTQERDE-CEAVVIGSEFWVVSGYKTERQGIFDESAESYQL--GTGEWKRAENAWK 273 (358)
Q Consensus 200 ---~~~~~~~~yd~~t~~W~~~~~~p~~~~~-~~~~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~--~~~~W~~~~~~p~ 273 (358)
..++++++||+.+++|+.++++|.++.. +++++++++||++||..... .....+++||+ .+++|+.+..+|.
T Consensus 162 ~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~--~~~~~v~~~d~d~~~~~W~~~~~~~~ 239 (357)
T 2uvk_A 162 EDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPG--LRTDAVFELDFTGNNLKWNKLAPVSS 239 (357)
T ss_dssp GGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETT--EECCCEEEEECC---CEEEECCCSST
T ss_pred cccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCC--cccCceEEEEecCCCCcEEecCCCCC
Confidence 1357999999999999999999986555 88899999999999986432 34678889987 8999999998754
Q ss_pred cCCCCCcee----------------------------------------eeeecCccCceeccccc--eeeceEEEEeCC
Q 018336 274 LSQCPRSNV----------------------------------------GVGREGKLFCWAETEAA--VQFGTCRVELGG 311 (358)
Q Consensus 274 ~~~~~~~~~----------------------------------------~~~~d~~~~~W~~lp~~--~r~~~~~~~~~~ 311 (358)
+ ..+..+ ..+||+++++|..++.. .|..++++.+++
T Consensus 240 ~--~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~ 317 (357)
T 2uvk_A 240 P--DGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWNN 317 (357)
T ss_dssp T--TCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEEETT
T ss_pred C--cccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEEeCC
Confidence 3 222211 11588899999666543 467788899999
Q ss_pred eEEEECCCCCCCC--ceEEEEECCCCceEee-cCCC
Q 018336 312 CTLVTGSGYQGGP--QEFYVVEGRNGKFRKF-DVPA 344 (358)
Q Consensus 312 ~i~v~gG~~~~~~--~~i~~yd~~~~~W~~~-~~p~ 344 (358)
+|||+||.+..+. +++++|+.++++|.+. ++|.
T Consensus 318 ~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~~~~ 353 (357)
T 2uvk_A 318 SLLIIGGETAGGKAVTDSVLITVKDNKVTVQNLEHH 353 (357)
T ss_dssp EEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC----
T ss_pred EEEEEeeeCCCCCEeeeEEEEEEcCcEeEeeecccc
Confidence 9999999876543 8999999999999998 5553
No 8
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=2.8e-33 Score=247.82 Aligned_cols=215 Identities=17% Similarity=0.224 Sum_probs=176.9
Q ss_pred CceeEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEEECCEEEEEcCcC---CCCCCCCe
Q 018336 128 PLFCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGELNGRVIIAGGHD---ENKTALSS 204 (358)
Q Consensus 128 ~~~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~---~~~~~~~~ 204 (358)
+..++++.+++.||++||.. ....+++++||+.+++|+.++++|.+|..|+++.++++||++||.. ......++
T Consensus 15 ~~~~~~~~~~~~i~v~GG~~---~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~ 91 (308)
T 1zgk_A 15 PRGSHAPKVGRLIYTAGGYF---RQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSA 91 (308)
T ss_dssp ------CCCCCCEEEECCBS---SSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCC
T ss_pred eCCccccCCCCEEEEEeCcC---CCCcceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecce
Confidence 34557778899999999983 2357899999999999999999999999999999999999999984 22345788
Q ss_pred EEEEECCCCceEecCCCccCcCceeEEEECCEEEEEeCcccCCCCceeeeeEEEECCCCceEEcCCccccCCCCCceeee
Q 018336 205 AWAYDLIKDEWTELARMTQERDECEAVVIGSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRAENAWKLSQCPRSNVGV 284 (358)
Q Consensus 205 ~~~yd~~t~~W~~~~~~p~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~~~p~~~~~~~~~~~~ 284 (358)
+++||+.+++|+.++++|.+|..+++++++++||++||.... ...+++++||+.+++|+.++.+|... ..++.+..
T Consensus 92 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~---~~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~~~~ 167 (308)
T 1zgk_A 92 LDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGC---IHHNSVERYEPERDEWHLVAPMLTRR-IGVGVAVL 167 (308)
T ss_dssp EEEEETTTTEEEECCCCSSCCBTCEEEEETTEEEEECCEETT---EECCCEEEEETTTTEEEECCCCSSCC-BSCEEEEE
T ss_pred EEEECCCCCeEeECCCCCcCccccEEEEECCEEEEEcCCCCC---cccccEEEECCCCCeEeECCCCCccc-cceEEEEE
Confidence 999999999999999999999999999999999999998653 24678999999999999999876421 22222221
Q ss_pred --------------------eecCccCceeccccc--eeeceEEEEeCCeEEEECCCCCCCC-ceEEEEECCCCceEee-
Q 018336 285 --------------------GREGKLFCWAETEAA--VQFGTCRVELGGCTLVTGSGYQGGP-QEFYVVEGRNGKFRKF- 340 (358)
Q Consensus 285 --------------------~~d~~~~~W~~lp~~--~r~~~~~~~~~~~i~v~gG~~~~~~-~~i~~yd~~~~~W~~~- 340 (358)
.||+++++|..+++. .|..++++.++++|||+||...... +++++||+++++|+++
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 247 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVA 247 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECC
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECC
Confidence 799999999777654 4788889999999999999875543 8999999999999999
Q ss_pred cCCCCccCc
Q 018336 341 DVPAEYKGL 349 (358)
Q Consensus 341 ~~p~~~~~~ 349 (358)
++|.++..+
T Consensus 248 ~~p~~r~~~ 256 (308)
T 1zgk_A 248 PMKHRRSAL 256 (308)
T ss_dssp CCSSCCBSC
T ss_pred CCCCCccce
Confidence 788777666
No 9
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=3.7e-33 Score=247.88 Aligned_cols=261 Identities=17% Similarity=0.174 Sum_probs=200.7
Q ss_pred hhhHHhhcHhHHHhhcChhh-HHHHHhcCCccceEEEEeeccCCCCCCCCCCCCCcceEEEEeCCCCCeeecCCCCCCCC
Q 018336 47 HRVATRVSRRWRQLIQSRDF-YYQRKQSGKTHKVACLVQSFPVHSGSGELKPMGLSYGVTVFDPVSLTWDRLGPVPEYPA 125 (358)
Q Consensus 47 ~~~~~~v~k~w~~l~~s~~f-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~ 125 (358)
+..+....++|.. ...|.. .+........+..+|++||....... .......+++.||+.+++|..++++|.++
T Consensus 15 ~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~---~~~~~~~~~~~~d~~~~~W~~~~~~p~~r- 89 (315)
T 4asc_A 15 AVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDN---KEDPMSAYFLQFDHLDSEWLGMPPLPSPR- 89 (315)
T ss_dssp EEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSC---SSSCEEEEEEEEETTTTEEEECCCBSSCE-
T ss_pred eEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCC---CccccccceEEecCCCCeEEECCCCCcch-
Confidence 3445555667753 322211 11112223346778898885321100 00113456999999999999999998764
Q ss_pred CCCceeEEEEECCEEEEEcCcCC-CCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEEECCEEEEEcCcCCCCCCCCe
Q 018336 126 GLPLFCQVASSQGKLVVMGGWDP-ASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGELNGRVIIAGGHDENKTALSS 204 (358)
Q Consensus 126 ~~~~~~~~~~~~~~lyv~Gg~~~-~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~ 204 (358)
..++++.++++||++||... ......+++++||+.+++|+.++++|.+|..|+++.++++||++||.+......++
T Consensus 90 ---~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 166 (315)
T 4asc_A 90 ---CLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNK 166 (315)
T ss_dssp ---ESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCC
T ss_pred ---hceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccce
Confidence 45688889999999999752 12245789999999999999999999999999999999999999999655567899
Q ss_pred EEEEECCCCceEecCCCccCcCceeEEEECCEEEEEeCcccCCCCceeeeeEEEECCCCceEEcCCccccCCCCCceeee
Q 018336 205 AWAYDLIKDEWTELARMTQERDECEAVVIGSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRAENAWKLSQCPRSNVGV 284 (358)
Q Consensus 205 ~~~yd~~t~~W~~~~~~p~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~~~p~~~~~~~~~~~~ 284 (358)
+++||+.+++|+.++++|.+|..+++++++++||++||..... ..+++++||+.+++|+.++.+|.+. ..++.+..
T Consensus 167 ~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~---~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~~~~ 242 (315)
T 4asc_A 167 MCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTG---LTSSAEVYSITDNKWAPFEAFPQER-SSLSLVSL 242 (315)
T ss_dssp EEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSS---EEEEEEEEETTTTEEEEECCCSSCC-BSCEEEEE
T ss_pred EEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCC---ccceEEEEECCCCeEEECCCCCCcc-cceeEEEE
Confidence 9999999999999999999999999999999999999986543 5789999999999999999876421 11111111
Q ss_pred -----------------------------eecCccCceeccccceeeceEEEEeCCeEEEECCC
Q 018336 285 -----------------------------GREGKLFCWAETEAAVQFGTCRVELGGCTLVTGSG 319 (358)
Q Consensus 285 -----------------------------~~d~~~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~ 319 (358)
.||+++++|..+++.+|..++++.++++||++...
T Consensus 243 ~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~r~~~~~~~~~~~l~v~~~~ 306 (315)
T 4asc_A 243 VGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVLREIAYAAGATFLPVRLNVLRLT 306 (315)
T ss_dssp TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEESCSSCCSSCEEEEEEECGGGSE
T ss_pred CCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhhccCCcCccceEEeCCEEEEEEeh
Confidence 58999999998887789999999999999998653
No 10
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=3e-32 Score=240.53 Aligned_cols=210 Identities=20% Similarity=0.297 Sum_probs=174.2
Q ss_pred EEEEECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEEECCEEEEEcCcCCCCCCCCeEEEEECC
Q 018336 132 QVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGELNGRVIIAGGHDENKTALSSAWAYDLI 211 (358)
Q Consensus 132 ~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~ 211 (358)
..+..++.||++||.+.. ..+++++||+.+++|..++++|.+|..|+++.++++||++||.+.. ...+++++||+.
T Consensus 10 ~~~~~~~~i~v~GG~~~~---~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~-~~~~~~~~~d~~ 85 (302)
T 2xn4_A 10 TPMNLPKLMVVVGGQAPK---AIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGS-LRVRTVDSYDPV 85 (302)
T ss_dssp -----CEEEEEECCBSSS---BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSS-SBCCCEEEEETT
T ss_pred cccCCCCEEEEECCCCCC---CCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCC-ccccceEEECCC
Confidence 345568899999997642 4678999999999999999999999999999999999999998754 457899999999
Q ss_pred CCceEecCCCccCcCceeEEEECCEEEEEeCcccCCCCceeeeeEEEECCCCceEEcCCccccCCCCCceeee-------
Q 018336 212 KDEWTELARMTQERDECEAVVIGSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRAENAWKLSQCPRSNVGV------- 284 (358)
Q Consensus 212 t~~W~~~~~~p~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~~~p~~~~~~~~~~~~------- 284 (358)
+++|+.++++|.+|..+++++++++||++||.... ...+++++||+.+++|+.++.+|.+. ..++.+..
T Consensus 86 ~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~---~~~~~~~~~d~~~~~W~~~~~~p~~r-~~~~~~~~~~~iyv~ 161 (302)
T 2xn4_A 86 KDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGS---TGLSSVEAYNIKSNEWFHVAPMNTRR-SSVGVGVVGGLLYAV 161 (302)
T ss_dssp TTEEEEECCCSSCCBSCEEEEETTEEEEEEEECSS---CEEEEEEEEETTTTEEEEECCCSSCC-BSCEEEEETTEEEEE
T ss_pred CCceeeCCCCCccccceEEEEECCEEEEEcCCCCC---ccCceEEEEeCCCCeEeecCCCCCcc-cCceEEEECCEEEEE
Confidence 99999999999999999999999999999998643 24789999999999999999886421 22221111
Q ss_pred ---------------eecCccCceeccccc--eeeceEEEEeCCeEEEECCCCCCCC-ceEEEEECCCCceEee-cCCCC
Q 018336 285 ---------------GREGKLFCWAETEAA--VQFGTCRVELGGCTLVTGSGYQGGP-QEFYVVEGRNGKFRKF-DVPAE 345 (358)
Q Consensus 285 ---------------~~d~~~~~W~~lp~~--~r~~~~~~~~~~~i~v~gG~~~~~~-~~i~~yd~~~~~W~~~-~~p~~ 345 (358)
.||+++++|..+++. .|..++++.++++|||+||...... +++++||+++++|+.+ .+|.+
T Consensus 162 GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~ 241 (302)
T 2xn4_A 162 GGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMC 241 (302)
T ss_dssp CCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSC
T ss_pred eCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCc
Confidence 799999999776544 4688899999999999999865443 7999999999999999 78877
Q ss_pred ccCc
Q 018336 346 YKGL 349 (358)
Q Consensus 346 ~~~~ 349 (358)
+..+
T Consensus 242 r~~~ 245 (302)
T 2xn4_A 242 RRNA 245 (302)
T ss_dssp CBSC
T ss_pred cccC
Confidence 7655
No 11
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=1.4e-32 Score=244.48 Aligned_cols=260 Identities=18% Similarity=0.236 Sum_probs=198.4
Q ss_pred hhhHHhhcHhHHHhhcChh-hHHHHHhcCCccceEEEEeeccCCCCCCCCCCCCCcceEEEEeCCCCCeeecCCCCCCCC
Q 018336 47 HRVATRVSRRWRQLIQSRD-FYYQRKQSGKTHKVACLVQSFPVHSGSGELKPMGLSYGVTVFDPVSLTWDRLGPVPEYPA 125 (358)
Q Consensus 47 ~~~~~~v~k~w~~l~~s~~-f~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~ 125 (358)
...+....++|... ..+. ..+........+..+|++||...... .........++.||+.+++|..++++|.++
T Consensus 26 ~~~yd~~~~~W~~~-~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~---~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r- 100 (318)
T 2woz_A 26 AVAYDPMENECYLT-ALAEQIPRNHSSIVTQQNQVYVVGGLYVDEE---NKDQPLQSYFFQLDNVSSEWVGLPPLPSAR- 100 (318)
T ss_dssp EEEEETTTTEEEEE-EECTTSCSSEEEEECSSSCEEEEESSCC----------CCCBEEEEEETTTTEEEECSCBSSCB-
T ss_pred eEEECCCCCceecc-cCCccCCccceEEEEECCEEEEECCcccCcc---ccCCCccccEEEEeCCCCcEEECCCCCccc-
Confidence 34455666778652 2111 11111222335678889998532110 000012345899999999999999998865
Q ss_pred CCCceeEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEEECCEEEEEcCcCCCCCCCCeE
Q 018336 126 GLPLFCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGELNGRVIIAGGHDENKTALSSA 205 (358)
Q Consensus 126 ~~~~~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 205 (358)
..+++++++++||++||.........+++++||+.+++|+.++++|.+|..|+++.++++||++||........+++
T Consensus 101 ---~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 177 (318)
T 2woz_A 101 ---CLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRV 177 (318)
T ss_dssp ---CSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCE
T ss_pred ---cccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceE
Confidence 35688889999999999864333457899999999999999999999999999999999999999986655668899
Q ss_pred EEEECCCCceEecCCCccCcCceeEEEECCEEEEEeCcccCCCCceeeeeEEEECCCCceEEcCCccccCCCCCceeee-
Q 018336 206 WAYDLIKDEWTELARMTQERDECEAVVIGSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRAENAWKLSQCPRSNVGV- 284 (358)
Q Consensus 206 ~~yd~~t~~W~~~~~~p~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~~~p~~~~~~~~~~~~- 284 (358)
++||+.+++|+.++++|.+|..+++++++++||++||..... ..+.+++||+.+++|+.+..+|.+. ..++.+..
T Consensus 178 ~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~---~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~~~~~ 253 (318)
T 2woz_A 178 FIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDG---LSASVEAFDLKTNKWEVMTEFPQER-SSISLVSLA 253 (318)
T ss_dssp EEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTE---EEEEEEEEETTTCCEEECCCCSSCC-BSCEEEEET
T ss_pred EEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCC---ccceEEEEECCCCeEEECCCCCCcc-cceEEEEEC
Confidence 999999999999999999999999999999999999987542 5789999999999999999887421 11111111
Q ss_pred ----------------------------eecCccCceeccccceeeceEEEEeCCeEEEECC
Q 018336 285 ----------------------------GREGKLFCWAETEAAVQFGTCRVELGGCTLVTGS 318 (358)
Q Consensus 285 ----------------------------~~d~~~~~W~~lp~~~r~~~~~~~~~~~i~v~gG 318 (358)
.||+++++|..+.+..|+.++++.++++|||+..
T Consensus 254 ~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~r~~~~~~~~~~~iyi~~~ 315 (318)
T 2woz_A 254 GSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGMLKEIRYASGASCLATRLNLFKL 315 (318)
T ss_dssp TEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEEESCCGGGTTCEEEEEEEEGGGC
T ss_pred CEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhhcccccccccceeeCCEEEEEEe
Confidence 5899999998886667888889999999999753
No 12
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=5.4e-32 Score=239.33 Aligned_cols=203 Identities=14% Similarity=0.144 Sum_probs=173.2
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEEECCEEEEEcCcCCCCCCCCeEEEEECCCCceE
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGELNGRVIIAGGHDENKTALSSAWAYDLIKDEWT 216 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~ 216 (358)
.+.||++||... .+++++||+.+++|+.++++|.+|..|+++.+++.||++||.+ ....+++++||+.+++|+
T Consensus 11 ~~~l~~~GG~~~-----~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~--~~~~~~~~~~d~~~~~W~ 83 (306)
T 3ii7_A 11 HDYRIALFGGSQ-----PQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQ--LFPIKRMDCYNVVKDSWY 83 (306)
T ss_dssp CCEEEEEECCSS-----TTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBS--SSBCCEEEEEETTTTEEE
T ss_pred cceEEEEeCCCC-----CceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCC--CCCcceEEEEeCCCCeEE
Confidence 578999999754 6789999999999999999999999999999999999999988 456789999999999999
Q ss_pred ecCCCccCcCceeEEEECCEEEEEeCcccCCCCceeeeeEEEECCCCceEEcCCccccCCCCCceeee------------
Q 018336 217 ELARMTQERDECEAVVIGSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRAENAWKLSQCPRSNVGV------------ 284 (358)
Q Consensus 217 ~~~~~p~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~~~p~~~~~~~~~~~~------------ 284 (358)
.++++|.+|..+++++++++||++||.... ....+++++||+.+++|+.++.+|.+. ..++.+..
T Consensus 84 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~--~~~~~~~~~~d~~~~~W~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~ 160 (306)
T 3ii7_A 84 SKLGPPTPRDSLAACAAEGKIYTSGGSEVG--NSALYLFECYDTRTESWHTKPSMLTQR-CSHGMVEANGLIYVCGGSLG 160 (306)
T ss_dssp EEECCSSCCBSCEEEEETTEEEEECCBBTT--BSCCCCEEEEETTTTEEEEECCCSSCC-BSCEEEEETTEEEEECCEES
T ss_pred ECCCCCccccceeEEEECCEEEEECCCCCC--CcEeeeEEEEeCCCCceEeCCCCcCCc-ceeEEEEECCEEEEECCCCC
Confidence 999999999999999999999999998622 234789999999999999999887431 22222111
Q ss_pred ------------eecCccCceeccccc--eeeceEEEEeCCeEEEECCCCCCCC-ceEEEEECCCCceEee-cCCCCccC
Q 018336 285 ------------GREGKLFCWAETEAA--VQFGTCRVELGGCTLVTGSGYQGGP-QEFYVVEGRNGKFRKF-DVPAEYKG 348 (358)
Q Consensus 285 ------------~~d~~~~~W~~lp~~--~r~~~~~~~~~~~i~v~gG~~~~~~-~~i~~yd~~~~~W~~~-~~p~~~~~ 348 (358)
.||+++++|..+++. .|..++++.++++|||+||...... +++++||+.+++|+.+ ++|.++..
T Consensus 161 ~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~ 240 (306)
T 3ii7_A 161 NNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVT 240 (306)
T ss_dssp CTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSC
T ss_pred CCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccc
Confidence 789999999777655 4688899999999999999865433 7899999999999999 88887766
Q ss_pred c
Q 018336 349 L 349 (358)
Q Consensus 349 ~ 349 (358)
+
T Consensus 241 ~ 241 (306)
T 3ii7_A 241 V 241 (306)
T ss_dssp C
T ss_pred e
Confidence 6
No 13
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=7.3e-32 Score=243.70 Aligned_cols=224 Identities=14% Similarity=0.134 Sum_probs=172.6
Q ss_pred ecCCCCCCCCCCCceeEEEEECCEEEEEcCcCCCCCCCcceeEEEECC--CCcEEeCCCCC-CCceeeeeEEECCEEEEE
Q 018336 116 RLGPVPEYPAGLPLFCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFT--TRRWTRGKNMP-DNRSFFAAGELNGRVIIA 192 (358)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~--t~~W~~~~~~~-~~~~~~~~~~~~~~iyv~ 192 (358)
.++++|.++. .++++.++++||++||.. .+++++||+. +++|+.++++| .+|..|++++++++||++
T Consensus 2 ~l~~lP~~r~----~~~~~~~~~~iyv~GG~~------~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~ 71 (357)
T 2uvk_A 2 VLPETPVPFK----SGTGAIDNDTVYIGLGSA------GTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVF 71 (357)
T ss_dssp CSCCCSSCCC----SCEEEEETTEEEEECGGG------TTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEE
T ss_pred CCCCCCcccc----ceEEEEECCEEEEEeCcC------CCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEE
Confidence 4677787653 456777799999999975 3479999998 49999999999 899999999999999999
Q ss_pred cCc-C---CCCCCCCeEEEEECCCCceEecCCCc-cCcCceeEEEECCEEEEEeCcccCCC-------------------
Q 018336 193 GGH-D---ENKTALSSAWAYDLIKDEWTELARMT-QERDECEAVVIGSEFWVVSGYKTERQ------------------- 248 (358)
Q Consensus 193 GG~-~---~~~~~~~~~~~yd~~t~~W~~~~~~p-~~~~~~~~~~~~~~lyv~gG~~~~~~------------------- 248 (358)
||. . .....++++++||+.+++|+.+++++ .+|..+++++++++||++||......
T Consensus 72 GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (357)
T 2uvk_A 72 GGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDK 151 (357)
T ss_dssp CCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhh
Confidence 998 2 12345789999999999999999888 89999999999999999999753210
Q ss_pred ------------CceeeeeEEEECCCCceEEcCCccccCCCCCceeee---------------------eecC--ccCce
Q 018336 249 ------------GIFDESAESYQLGTGEWKRAENAWKLSQCPRSNVGV---------------------GREG--KLFCW 293 (358)
Q Consensus 249 ------------~~~~~~i~~yd~~~~~W~~~~~~p~~~~~~~~~~~~---------------------~~d~--~~~~W 293 (358)
....+.+++||+.+++|+.+..+|.......+.+.. .||. ++++|
T Consensus 152 ~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W 231 (357)
T 2uvk_A 152 INAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKW 231 (357)
T ss_dssp HHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEE
T ss_pred hhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcE
Confidence 013578999999999999998876432221222222 4654 99999
Q ss_pred eccccc----eeeceEEEEeCCeEEEECCCCCCC-----------------C-ceEEEEECCCCceEee-cCCCCccCc
Q 018336 294 AETEAA----VQFGTCRVELGGCTLVTGSGYQGG-----------------P-QEFYVVEGRNGKFRKF-DVPAEYKGL 349 (358)
Q Consensus 294 ~~lp~~----~r~~~~~~~~~~~i~v~gG~~~~~-----------------~-~~i~~yd~~~~~W~~~-~~p~~~~~~ 349 (358)
..++.. .+..++++.++++|||+||..... . .++++||+++++|+++ .+|.++..+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~ 310 (357)
T 2uvk_A 232 NKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYG 310 (357)
T ss_dssp EECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSS
T ss_pred EecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccc
Confidence 766543 246788999999999999974321 1 5789999999999999 889887776
No 14
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=2.6e-31 Score=234.36 Aligned_cols=208 Identities=21% Similarity=0.292 Sum_probs=174.9
Q ss_pred EECCEEEEEcC-cCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEEECCEEEEEcCcCCCCCCCCeEEEEECCCC
Q 018336 135 SSQGKLVVMGG-WDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGELNGRVIIAGGHDENKTALSSAWAYDLIKD 213 (358)
Q Consensus 135 ~~~~~lyv~Gg-~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~ 213 (358)
..++.||++|| .... ...+++++||+.+++|..++++|.+|..|+++.++++||++||.... ...+++++||+.++
T Consensus 12 ~~~~~i~~~GG~~~~~--~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~-~~~~~~~~~d~~~~ 88 (301)
T 2vpj_A 12 GANEVLLVVGGFGSQQ--SPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGR-SRLSSVECLDYTAD 88 (301)
T ss_dssp -CCEEEEEECCEETTT--EECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSS-CBCCCEEEEETTCC
T ss_pred cCCCEEEEEeCccCCC--cceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCC-ccCceEEEEECCCC
Confidence 36889999999 4432 34789999999999999999999999999999999999999998743 45789999999999
Q ss_pred c---eEecCCCccCcCceeEEEECCEEEEEeCcccCCCCceeeeeEEEECCCCceEEcCCccccCCCCCceeee------
Q 018336 214 E---WTELARMTQERDECEAVVIGSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRAENAWKLSQCPRSNVGV------ 284 (358)
Q Consensus 214 ~---W~~~~~~p~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~~~p~~~~~~~~~~~~------ 284 (358)
+ |+.++++|.+|..+++++++++||++||..... ..+++++||+.+++|+.++.+|... ..++.+..
T Consensus 89 ~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~---~~~~~~~~d~~~~~W~~~~~~p~~r-~~~~~~~~~~~iyv 164 (301)
T 2vpj_A 89 EDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSR---RHTSMERYDPNIDQWSMLGDMQTAR-EGAGLVVASGVIYC 164 (301)
T ss_dssp TTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSC---BCCEEEEEETTTTEEEEEEECSSCC-BSCEEEEETTEEEE
T ss_pred CCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCc---ccceEEEEcCCCCeEEECCCCCCCc-ccceEEEECCEEEE
Confidence 9 999999999999999999999999999987443 3678999999999999998876421 22222211
Q ss_pred --------------eecCccCceeccccc--eeeceEEEEeCCeEEEECCCCCCCC-ceEEEEECCCCceEee-cCCCCc
Q 018336 285 --------------GREGKLFCWAETEAA--VQFGTCRVELGGCTLVTGSGYQGGP-QEFYVVEGRNGKFRKF-DVPAEY 346 (358)
Q Consensus 285 --------------~~d~~~~~W~~lp~~--~r~~~~~~~~~~~i~v~gG~~~~~~-~~i~~yd~~~~~W~~~-~~p~~~ 346 (358)
.||+++++|..+++. .|..++++..+++|||+||...... +++++||+++++|+.+ .+|.++
T Consensus 165 ~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r 244 (301)
T 2vpj_A 165 LGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPR 244 (301)
T ss_dssp ECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCC
T ss_pred ECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcc
Confidence 799999999777644 4678889999999999999876543 8999999999999999 788877
Q ss_pred cCc
Q 018336 347 KGL 349 (358)
Q Consensus 347 ~~~ 349 (358)
..+
T Consensus 245 ~~~ 247 (301)
T 2vpj_A 245 CYV 247 (301)
T ss_dssp BSC
T ss_pred cce
Confidence 666
No 15
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.98 E-value=5e-31 Score=256.93 Aligned_cols=224 Identities=13% Similarity=0.191 Sum_probs=183.2
Q ss_pred ccceEEEEeeccCCCCCCCCCCCCCcceEEEEeCCCCCeeecC-C-----CCCCCCCCCceeEEEEE--CCEEEEEcCcC
Q 018336 76 THKVACLVQSFPVHSGSGELKPMGLSYGVTVFDPVSLTWDRLG-P-----VPEYPAGLPLFCQVASS--QGKLVVMGGWD 147 (358)
Q Consensus 76 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~-~-----~~~~~~~~~~~~~~~~~--~~~lyv~Gg~~ 147 (358)
.+..+|++||... . ...++++||+.+++|..++ + +|.+ +.+|+++++ +++||++||..
T Consensus 396 ~~~~iyv~GG~~~-~---------~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~----R~~hs~~~~~~~~~lyv~GG~~ 461 (695)
T 2zwa_A 396 AGNDVFYMGGSNP-Y---------RVNEILQLSIHYDKIDMKNIEVSSSEVPVA----RMCHTFTTISRNNQLLLIGGRK 461 (695)
T ss_dssp CSSCEEEECCBSS-S---------BCCCEEEEEECSSCEEEEECCCCCSCCCCC----CBSCEEEEETTTTEEEEECCBS
T ss_pred ECCEEEEECCCCC-C---------CcCcEEEEECCCCeEEEeccCCCCCCCCcc----ccceEEEEEccCCEEEEEcCCC
Confidence 3567888888643 1 3467999999999999998 6 3443 457788999 99999999986
Q ss_pred CCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEEE-CCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCC---Ccc
Q 018336 148 PASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGEL-NGRVIIAGGHDENKTALSSAWAYDLIKDEWTELAR---MTQ 223 (358)
Q Consensus 148 ~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~---~p~ 223 (358)
... ..++++|+||+.+++|+.++++|.+|..|+++.+ +++||++||.+... ++++||+.+++|+.+++ +|.
T Consensus 462 ~~~-~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~----~v~~yd~~t~~W~~~~~~g~~p~ 536 (695)
T 2zwa_A 462 APH-QGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP----AMLLYNVTEEIFKDVTPKDEFFQ 536 (695)
T ss_dssp STT-CBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC----SEEEEETTTTEEEECCCSSGGGG
T ss_pred CCC-CccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC----CEEEEECCCCceEEccCCCCCCC
Confidence 543 2578999999999999999999999999999996 99999999987653 89999999999999986 899
Q ss_pred CcCceeEEEEC---CEEEEEeCcccCCCCceeeeeEEEECCCCc------eEEcCCccccCCCCCceeeeeecCccCcee
Q 018336 224 ERDECEAVVIG---SEFWVVSGYKTERQGIFDESAESYQLGTGE------WKRAENAWKLSQCPRSNVGVGREGKLFCWA 294 (358)
Q Consensus 224 ~~~~~~~~~~~---~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~------W~~~~~~p~~~~~~~~~~~~~~d~~~~~W~ 294 (358)
+|..+++++++ ++||++||..... ....+++++||+.+++ |+.+..+|.
T Consensus 537 ~r~~~~a~v~~~~~~~iyv~GG~~~~~-~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~--------------------- 594 (695)
T 2zwa_A 537 NSLVSAGLEFDPVSKQGIILGGGFMDQ-TTVSDKAIIFKYDAENATEPITVIKKLQHPL--------------------- 594 (695)
T ss_dssp SCCBSCEEEEETTTTEEEEECCBCTTS-SCBCCEEEEEEECTTCSSCCEEEEEEEECGG---------------------
T ss_pred cccceeEEEEeCCCCEEEEECCcCCCC-CeeeCcEEEEEccCCccccceEEEEcCCCCC---------------------
Confidence 99999988877 8999999985432 1357899999999999 666655421
Q ss_pred ccccceeeceEEEEeC-CeEEEECCCCCCC----CceEEEEECCCCceEeecCCC
Q 018336 295 ETEAAVQFGTCRVELG-GCTLVTGSGYQGG----PQEFYVVEGRNGKFRKFDVPA 344 (358)
Q Consensus 295 ~lp~~~r~~~~~~~~~-~~i~v~gG~~~~~----~~~i~~yd~~~~~W~~~~~p~ 344 (358)
..|..++++.++ ++|||+||..... .+++++||+.+++|+.+.+|.
T Consensus 595 ----~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~p~ 645 (695)
T 2zwa_A 595 ----FQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLTSIPISR 645 (695)
T ss_dssp ----GCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEEECCCCH
T ss_pred ----CCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEEEeeccc
Confidence 125566778888 9999999986443 289999999999999876554
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.96 E-value=1.1e-27 Score=233.38 Aligned_cols=186 Identities=16% Similarity=0.310 Sum_probs=154.2
Q ss_pred ceeEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCC-C-----CCCCceeeeeEEE--CCEEEEEcCcCCCCC
Q 018336 129 LFCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGK-N-----MPDNRSFFAAGEL--NGRVIIAGGHDENKT 200 (358)
Q Consensus 129 ~~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~-~-----~~~~~~~~~~~~~--~~~iyv~GG~~~~~~ 200 (358)
.++++++.++.||++||... ...+++++||+.+++|+.++ + +|.+|..|+++++ +++||++||.+....
T Consensus 389 r~g~~~~~~~~iyv~GG~~~---~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~ 465 (695)
T 2zwa_A 389 KFGDVDVAGNDVFYMGGSNP---YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQ 465 (695)
T ss_dssp BSCEEEECSSCEEEECCBSS---SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTC
T ss_pred ceeEEEEECCEEEEECCCCC---CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCC
Confidence 34456668999999999865 35789999999999999987 5 7899999999999 999999999987655
Q ss_pred CCCeEEEEECCCCceEecCCCccCcCceeEEEE-CCEEEEEeCcccCCCCceeeeeEEEECCCCceEEcCC---ccccCC
Q 018336 201 ALSSAWAYDLIKDEWTELARMTQERDECEAVVI-GSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRAEN---AWKLSQ 276 (358)
Q Consensus 201 ~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~-~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~~---~p~~~~ 276 (358)
.++++++||+.+++|+.++++|.+|..|+++++ +++|||+||..... ++++||+.+++|+.+.. +|
T Consensus 466 ~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~------~v~~yd~~t~~W~~~~~~g~~p---- 535 (695)
T 2zwa_A 466 GLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP------AMLLYNVTEEIFKDVTPKDEFF---- 535 (695)
T ss_dssp BCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC------SEEEEETTTTEEEECCCSSGGG----
T ss_pred ccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC------CEEEEECCCCceEEccCCCCCC----
Confidence 688999999999999999999999999999996 99999999986442 89999999999999986 33
Q ss_pred CCCceeeeeecCccCceeccccceeeceEEEEeC---CeEEEECCCCCCC---CceEEEEECCCCc------eEee-cCC
Q 018336 277 CPRSNVGVGREGKLFCWAETEAAVQFGTCRVELG---GCTLVTGSGYQGG---PQEFYVVEGRNGK------FRKF-DVP 343 (358)
Q Consensus 277 ~~~~~~~~~~d~~~~~W~~lp~~~r~~~~~~~~~---~~i~v~gG~~~~~---~~~i~~yd~~~~~------W~~~-~~p 343 (358)
.+ |..+++++++ ++|||+||...++ .+++++||+.+++ |+.+ ..|
T Consensus 536 ~~----------------------r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p 593 (695)
T 2zwa_A 536 QN----------------------SLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHP 593 (695)
T ss_dssp GS----------------------CCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECG
T ss_pred Cc----------------------ccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCC
Confidence 22 3333444545 8999999986543 2899999999999 8988 543
Q ss_pred -CCccCc
Q 018336 344 -AEYKGL 349 (358)
Q Consensus 344 -~~~~~~ 349 (358)
.++.++
T Consensus 594 ~~~R~~~ 600 (695)
T 2zwa_A 594 LFQRYGS 600 (695)
T ss_dssp GGCCBSC
T ss_pred CCCcccc
Confidence 445444
No 17
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.95 E-value=4.3e-27 Score=228.80 Aligned_cols=288 Identities=15% Similarity=0.100 Sum_probs=178.6
Q ss_pred HHhhcHhHHHhhcChhhHHHHHhcCCccceEEEEeeccCCCCCCCCCCCCCcceEEEEeCCCCCeeecCCCCCCCCCCCc
Q 018336 50 ATRVSRRWRQLIQSRDFYYQRKQSGKTHKVACLVQSFPVHSGSGELKPMGLSYGVTVFDPVSLTWDRLGPVPEYPAGLPL 129 (358)
Q Consensus 50 ~~~v~k~w~~l~~s~~f~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~ 129 (358)
+.....+|..+...|.... ...+...+..+|++|+........ .......+++||+.+++|..++.++.++.. .
T Consensus 171 ~dp~~~~W~~~~~~P~~~~-~~av~~~~g~l~v~GG~~~~~~~~---~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~--~ 244 (656)
T 1k3i_A 171 PQPGLGRWGPTIDLPIVPA-AAAIEPTSGRVLMWSSYRNDAFGG---SPGGITLTSSWDPSTGIVSDRTVTVTKHDM--F 244 (656)
T ss_dssp CCTTSCEEEEEEECSSCCS-EEEEETTTTEEEEEEECCCTTTCS---CCCSEEEEEEECTTTCCBCCCEEEECSCCC--S
T ss_pred CCCCCCeeeeeccCCCCce-eEEEEecCCEEEEEeccccccccc---CCCCeEEEEEEeCCCCcEEeCcccCCCCCC--c
Confidence 3445567776666655111 011111166788888864321100 001234789999999999999888776542 2
Q ss_pred eeEEE-EECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEEE-CCEEEEEcCcCCCCCCCCeEEE
Q 018336 130 FCQVA-SSQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGEL-NGRVIIAGGHDENKTALSSAWA 207 (358)
Q Consensus 130 ~~~~~-~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~ 207 (358)
.++++ ..+++||++||... .++++||+.+++|..+++|+.+|..|+++++ +++||++||.........++++
T Consensus 245 ~~~~~~~~~g~lyv~GG~~~------~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~ 318 (656)
T 1k3i_A 245 CPGISMDGNGQIVVTGGNDA------KKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEV 318 (656)
T ss_dssp SCEEEECTTSCEEEECSSST------TCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEE
T ss_pred cccccCCCCCCEEEeCCCCC------CceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceE
Confidence 22333 45899999999753 3799999999999999999999999999999 9999999996444456789999
Q ss_pred EECCCCceEecC-----CCccCcCceeEEEECCEEEEEeCcccCCC-CceeeeeEEEECCCCc-----------------
Q 018336 208 YDLIKDEWTELA-----RMTQERDECEAVVIGSEFWVVSGYKTERQ-GIFDESAESYQLGTGE----------------- 264 (358)
Q Consensus 208 yd~~t~~W~~~~-----~~p~~~~~~~~~~~~~~lyv~gG~~~~~~-~~~~~~i~~yd~~~~~----------------- 264 (358)
||+.+++|+.++ +++..+.. .++..++++|++||.++... ......++.||+.+++
T Consensus 319 yd~~t~~W~~~~~~~~~p~~~~~~~-~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~ 397 (656)
T 1k3i_A 319 YSPSSKTWTSLPNAKVNPMLTADKQ-GLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPD 397 (656)
T ss_dssp EETTTTEEEEETTSCSGGGCCCCTT-GGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCC
T ss_pred eCCCCCcceeCCCcccccccccccc-ceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCC
Confidence 999999999973 44444322 23334555555555432110 0012344444443221
Q ss_pred ----eEEc----CC-ccc-cCC-------CCCce-eeeeecCccCceeccc--c--ceeeceEEEEe-CCeEEEECCCCC
Q 018336 265 ----WKRA----EN-AWK-LSQ-------CPRSN-VGVGREGKLFCWAETE--A--AVQFGTCRVEL-GGCTLVTGSGYQ 321 (358)
Q Consensus 265 ----W~~~----~~-~p~-~~~-------~~~~~-~~~~~d~~~~~W~~lp--~--~~r~~~~~~~~-~~~i~v~gG~~~ 321 (358)
...+ .. +-. .+. ....+ ...+||++++.|..+. . ..|..++++.+ +++|||+||...
T Consensus 398 ~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~ 477 (656)
T 1k3i_A 398 AMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRR 477 (656)
T ss_dssp CBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSB
T ss_pred CCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCccc
Confidence 1110 00 000 000 00000 1114555555553332 1 13555666666 999999999763
Q ss_pred CC-------CceEEEEECCCCceEee-cCCCCccCce
Q 018336 322 GG-------PQEFYVVEGRNGKFRKF-DVPAEYKGLV 350 (358)
Q Consensus 322 ~~-------~~~i~~yd~~~~~W~~~-~~p~~~~~~~ 350 (358)
.. ..++++||+++++|+.+ ++|.++..|.
T Consensus 478 ~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs 514 (656)
T 1k3i_A 478 GIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHS 514 (656)
T ss_dssp CCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTE
T ss_pred CcCcCCCCcccceEEEcCCCCceeecCCCCCcccccc
Confidence 21 17899999999999999 7888888773
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.94 E-value=2.8e-26 Score=223.16 Aligned_cols=234 Identities=14% Similarity=0.151 Sum_probs=170.4
Q ss_pred eEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEE--CCEEEEEcCcCCCCC----CCcceeEEEECCCCcEEeCCCCCCC
Q 018336 103 GVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASS--QGKLVVMGGWDPASY----SPVSHVFVYDFTTRRWTRGKNMPDN 176 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~--~~~lyv~Gg~~~~~~----~~~~~~~~yd~~t~~W~~~~~~~~~ 176 (358)
.+.+|||.+++|..++++|.. .++++.. +++||++||...... .....+++||+.+++|+.++.+|.+
T Consensus 167 ~~~~~dp~~~~W~~~~~~P~~------~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~ 240 (656)
T 1k3i_A 167 SYTAPQPGLGRWGPTIDLPIV------PAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTK 240 (656)
T ss_dssp CCCCCCTTSCEEEEEEECSSC------CSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECS
T ss_pred ccccCCCCCCeeeeeccCCCC------ceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCC
Confidence 466789999999999888762 2244545 999999999754321 1345899999999999999998888
Q ss_pred ceeee--eEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEEE-CCEEEEEeCcccCCCCcee
Q 018336 177 RSFFA--AGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVVI-GSEFWVVSGYKTERQGIFD 252 (358)
Q Consensus 177 ~~~~~--~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~-~~~lyv~gG~~~~~~~~~~ 252 (358)
|..++ ++. .+++||++||.... ++++||+.+++|+++++||.+|..++++++ +|+||++||..... ...
T Consensus 241 ~~~~~~~~~~~~~g~lyv~GG~~~~-----~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~--~~~ 313 (656)
T 1k3i_A 241 HDMFCPGISMDGNGQIVVTGGNDAK-----KTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGG--VFE 313 (656)
T ss_dssp CCCSSCEEEECTTSCEEEECSSSTT-----CEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSS--SCC
T ss_pred CCCccccccCCCCCCEEEeCCCCCC-----ceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCC--ccc
Confidence 86654 333 58999999997643 699999999999999999999999999998 99999999953221 246
Q ss_pred eeeEEEECCCCceEEcCC-----ccccCC------CCCc----------------eeeeeecCccCceec-cccce----
Q 018336 253 ESAESYQLGTGEWKRAEN-----AWKLSQ------CPRS----------------NVGVGREGKLFCWAE-TEAAV---- 300 (358)
Q Consensus 253 ~~i~~yd~~~~~W~~~~~-----~p~~~~------~~~~----------------~~~~~~d~~~~~W~~-lp~~~---- 300 (358)
.++++||+.+++|+.++. ++.... ..+. .....||++++.|.. +....
T Consensus 314 ~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~ 393 (656)
T 1k3i_A 314 KNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRG 393 (656)
T ss_dssp CCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTE
T ss_pred ccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccc
Confidence 789999999999999742 321100 0000 011168999999833 22111
Q ss_pred ----eeceEEE---EeCCeEEEECCCCCCC----Cc---eEEEEECCCCceEee---cCCCCccCc
Q 018336 301 ----QFGTCRV---ELGGCTLVTGSGYQGG----PQ---EFYVVEGRNGKFRKF---DVPAEYKGL 349 (358)
Q Consensus 301 ----r~~~~~~---~~~~~i~v~gG~~~~~----~~---~i~~yd~~~~~W~~~---~~p~~~~~~ 349 (358)
+..++++ ..+++|||+||..... .+ .+++||+.+++|.++ .+|.++..+
T Consensus 394 ~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~ 459 (656)
T 1k3i_A 394 VAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFH 459 (656)
T ss_dssp ECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSC
T ss_pred cCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccC
Confidence 1223333 3589999999974311 13 789999999999987 567666555
No 19
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=98.92 E-value=9.5e-10 Score=68.97 Aligned_cols=45 Identities=22% Similarity=0.397 Sum_probs=39.4
Q ss_pred CCCCCCCcHHHHHHHhccCCcchhhhHHhhcHhHHHhhcChhhHH
Q 018336 24 GELVPGLPEEISLECLTRLHYSTHRVATRVSRRWRQLIQSRDFYY 68 (358)
Q Consensus 24 ~~~~~~Lp~d~~~~il~rlp~~~~~~~~~v~k~w~~l~~s~~f~~ 68 (358)
...|..||+|++.+||++||..++.++++|||+|+.++.++.+.+
T Consensus 6 ~~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW~ 50 (53)
T 1fs1_A 6 GVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQ 50 (53)
T ss_dssp ---CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC-
T ss_pred CCCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 456889999999999999999999999999999999999988754
No 20
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=98.91 E-value=8.1e-10 Score=94.34 Aligned_cols=50 Identities=24% Similarity=0.413 Sum_probs=45.5
Q ss_pred CCCCCCCcHHHHHHHhccCCcchhh-hHHhhcHhHHHhhcChhhHHHHHhc
Q 018336 24 GELVPGLPEEISLECLTRLHYSTHR-VATRVSRRWRQLIQSRDFYYQRKQS 73 (358)
Q Consensus 24 ~~~~~~Lp~d~~~~il~rlp~~~~~-~~~~v~k~w~~l~~s~~f~~~~~~~ 73 (358)
...+..||+|++++||+|||.++|. ++++|||+|+.|+.++.|.+.+...
T Consensus 48 ~~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~ 98 (297)
T 2e31_A 48 VEYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQ 98 (297)
T ss_dssp CCCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHH
T ss_pred ccChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhc
Confidence 4478899999999999999999999 9999999999999999998876543
No 21
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.78 E-value=5.3e-06 Score=76.18 Aligned_cols=45 Identities=24% Similarity=0.414 Sum_probs=40.7
Q ss_pred CCCCCCcHHHHHHHhccCCcchhhhHHhhcHhHHHhhcChhhHHH
Q 018336 25 ELVPGLPEEISLECLTRLHYSTHRVATRVSRRWRQLIQSRDFYYQ 69 (358)
Q Consensus 25 ~~~~~Lp~d~~~~il~rlp~~~~~~~~~v~k~w~~l~~s~~f~~~ 69 (358)
..+..||+|++.+||+.|+.+++.++..|||+|+.++.++.+.+.
T Consensus 17 d~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~ 61 (445)
T 2ovr_B 17 DFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWRE 61 (445)
T ss_dssp STTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHH
T ss_pred ChhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhh
Confidence 368899999999999999999999999999999999988876554
No 22
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.76 E-value=6.6e-07 Score=82.65 Aligned_cols=42 Identities=29% Similarity=0.561 Sum_probs=38.1
Q ss_pred CCCCCcHHHHHHHhccCCcchhhhHHhhcHhHHHhhcC-hhhH
Q 018336 26 LVPGLPEEISLECLTRLHYSTHRVATRVSRRWRQLIQS-RDFY 67 (358)
Q Consensus 26 ~~~~Lp~d~~~~il~rlp~~~~~~~~~v~k~w~~l~~s-~~f~ 67 (358)
.|+.||+|++.+||+.||.+++.++..|||+|+.++.+ +.+.
T Consensus 14 ~~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~w 56 (464)
T 3v7d_B 14 LITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLW 56 (464)
T ss_dssp HHHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHHH
T ss_pred ChHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 46779999999999999999999999999999999988 6543
No 23
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.70 E-value=1.7e-06 Score=79.32 Aligned_cols=43 Identities=19% Similarity=0.356 Sum_probs=38.2
Q ss_pred CCCCCcHH----HHHHHhccCCcchhhhHHhhcHhHHHhhcChhhHH
Q 018336 26 LVPGLPEE----ISLECLTRLHYSTHRVATRVSRRWRQLIQSRDFYY 68 (358)
Q Consensus 26 ~~~~Lp~d----~~~~il~rlp~~~~~~~~~v~k~w~~l~~s~~f~~ 68 (358)
.++.||+| ++.+||+.|+..++.++.+|||+|+.++.++.+.+
T Consensus 10 ~~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~ 56 (435)
T 1p22_A 10 FITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWK 56 (435)
T ss_dssp HHHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHH
T ss_pred hHHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHH
Confidence 45679999 99999999999999999999999999988776544
No 24
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.11 E-value=0.00041 Score=57.67 Aligned_cols=158 Identities=15% Similarity=0.013 Sum_probs=102.2
Q ss_pred eeEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEEECCEEEEEcCcCCCCCCCCeEEEEE
Q 018336 130 FCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGELNGRVIIAGGHDENKTALSSAWAYD 209 (358)
Q Consensus 130 ~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd 209 (358)
..++...++.||+..|..+ .+.+.++|+.+++-..--+++......+.+..+++||++... .+.+++||
T Consensus 23 tqGL~~~~~~LyestG~~g-----~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~------~~~v~v~D 91 (243)
T 3mbr_X 23 TEGLFYLRGHLYESTGETG-----RSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWR------NHEGFVYD 91 (243)
T ss_dssp EEEEEEETTEEEEEECCTT-----SCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS------SSEEEEEE
T ss_pred cccEEEECCEEEEECCCCC-----CceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEee------CCEEEEEE
Confidence 4567777899999988643 358999999999876544555555556677789999998432 36799999
Q ss_pred CCCCceEecCCCccCcCceeEEEECCEEEEEeCcccCCCCceeeeeEEEECCCCceE-EcCCccccCCCCCceeeeeecC
Q 018336 210 LIKDEWTELARMTQERDECEAVVIGSEFWVVSGYKTERQGIFDESAESYQLGTGEWK-RAENAWKLSQCPRSNVGVGREG 288 (358)
Q Consensus 210 ~~t~~W~~~~~~p~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~-~~~~~p~~~~~~~~~~~~~~d~ 288 (358)
+++.+-. ..++.+..+.+++.-+++||+.-| .+.+..+|+++.+-. .+..-.. . .+.
T Consensus 92 ~~tl~~~--~ti~~~~~Gwglt~dg~~L~vSdg---------s~~l~~iDp~t~~~~~~I~V~~~-g-~~~--------- 149 (243)
T 3mbr_X 92 LATLTPR--ARFRYPGEGWALTSDDSHLYMSDG---------TAVIRKLDPDTLQQVGSIKVTAG-G-RPL--------- 149 (243)
T ss_dssp TTTTEEE--EEEECSSCCCEEEECSSCEEEECS---------SSEEEEECTTTCCEEEEEECEET-T-EEC---------
T ss_pred CCcCcEE--EEEeCCCCceEEeeCCCEEEEECC---------CCeEEEEeCCCCeEEEEEEEccC-C-ccc---------
Confidence 9886543 333333345555655667888865 236789999987532 2221100 0 000
Q ss_pred ccCceeccccceeeceEEEEeCCeEEEECCCCCCCCceEEEEECCCCc
Q 018336 289 KLFCWAETEAAVQFGTCRVELGGCTLVTGSGYQGGPQEFYVVEGRNGK 336 (358)
Q Consensus 289 ~~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~~~~~~i~~yd~~~~~ 336 (358)
+...-+...+++||+---.. +.|.+.|+++++
T Consensus 150 ------------~~lNeLe~~~G~lyanvw~s----~~I~vIDp~tG~ 181 (243)
T 3mbr_X 150 ------------DNLNELEWVNGELLANVWLT----SRIARIDPASGK 181 (243)
T ss_dssp ------------CCEEEEEEETTEEEEEETTT----TEEEEECTTTCB
T ss_pred ------------ccceeeEEeCCEEEEEECCC----CeEEEEECCCCC
Confidence 01112344589998654332 689999999988
No 25
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.87 E-value=0.00046 Score=57.91 Aligned_cols=159 Identities=5% Similarity=-0.082 Sum_probs=98.4
Q ss_pred eEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEEECCEEEEEcCcCCCCCCCCeEEEEEC
Q 018336 131 CQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGELNGRVIIAGGHDENKTALSSAWAYDL 210 (358)
Q Consensus 131 ~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~ 210 (358)
.++...++.||+..|..+ .+.+.++|+.|.+-..--+++......+.+..+++||++-.. .+.+.+||+
T Consensus 46 qGL~~~~~~LyestG~~g-----~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~------~~~v~v~D~ 114 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLNG-----RSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWK------NGLGFVWNI 114 (262)
T ss_dssp EEEEEETTEEEEEEEETT-----EEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS------SSEEEEEET
T ss_pred ceEEEECCEEEEECCCCC-----CceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEee------CCEEEEEEC
Confidence 455556889999988543 357999999998865433444444445567789999999432 357999999
Q ss_pred CCCceEecCCCccCcCceeEEEECCEEEEEeCcccCCCCceeeeeEEEECCCCceE-EcCCccccCCCCCceeeeeecCc
Q 018336 211 IKDEWTELARMTQERDECEAVVIGSEFWVVSGYKTERQGIFDESAESYQLGTGEWK-RAENAWKLSQCPRSNVGVGREGK 289 (358)
Q Consensus 211 ~t~~W~~~~~~p~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~-~~~~~p~~~~~~~~~~~~~~d~~ 289 (358)
++.+-. ..++.+..+.+++.-+++||+.-| .+.+..+|+++.+-. .+..- . .++..
T Consensus 115 ~t~~~~--~ti~~~~eG~glt~dg~~L~~SdG---------s~~i~~iDp~T~~v~~~I~V~-~---~g~~~-------- 171 (262)
T 3nol_A 115 RNLRQV--RSFNYDGEGWGLTHNDQYLIMSDG---------TPVLRFLDPESLTPVRTITVT-A---HGEEL-------- 171 (262)
T ss_dssp TTCCEE--EEEECSSCCCCEEECSSCEEECCS---------SSEEEEECTTTCSEEEEEECE-E---TTEEC--------
T ss_pred ccCcEE--EEEECCCCceEEecCCCEEEEECC---------CCeEEEEcCCCCeEEEEEEec-c---CCccc--------
Confidence 886543 223333344455555566888765 236889999987533 22221 0 00000
Q ss_pred cCceeccccceeeceEEEEeCCeEEEECCCCCCCCceEEEEECCCCceE
Q 018336 290 LFCWAETEAAVQFGTCRVELGGCTLVTGSGYQGGPQEFYVVEGRNGKFR 338 (358)
Q Consensus 290 ~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~~~~~~i~~yd~~~~~W~ 338 (358)
..-.-+...+++||+---.. +.|.+.|+++++=.
T Consensus 172 -----------~~lNELe~~~G~lyan~w~~----~~I~vIDp~tG~V~ 205 (262)
T 3nol_A 172 -----------PELNELEWVDGEIFANVWQT----NKIVRIDPETGKVT 205 (262)
T ss_dssp -----------CCEEEEEEETTEEEEEETTS----SEEEEECTTTCBEE
T ss_pred -----------cccceeEEECCEEEEEEccC----CeEEEEECCCCcEE
Confidence 00001233588998654322 68999999998843
No 26
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.76 E-value=0.016 Score=50.64 Aligned_cols=191 Identities=10% Similarity=0.022 Sum_probs=110.9
Q ss_pred ceEEEEeCCCCCeeecCCC--CCCCCCCCceeEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCCcE-EeCCCCCCCce
Q 018336 102 YGVTVFDPVSLTWDRLGPV--PEYPAGLPLFCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRRW-TRGKNMPDNRS 178 (358)
Q Consensus 102 ~~~~~~d~~~~~W~~~~~~--~~~~~~~~~~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W-~~~~~~~~~~~ 178 (358)
..+..+|+.+++....-.. .....+ .....++..++++|+.... .+.+.++|+.|.+- ..++....|
T Consensus 17 ~~l~~~d~~t~~~~~~i~~~~n~~~lg-~~~~~i~~~~~~lyv~~~~-------~~~v~viD~~t~~~~~~i~~~~~p-- 86 (328)
T 3dsm_A 17 ATLSYYDPATCEVENEVFYRANGFKLG-DVAQSMVIRDGIGWIVVNN-------SHVIFAIDINTFKEVGRITGFTSP-- 86 (328)
T ss_dssp BEEEEEETTTTEEECSHHHHHHSSCCB-SCEEEEEEETTEEEEEEGG-------GTEEEEEETTTCCEEEEEECCSSE--
T ss_pred ceEEEEECCCCEEhhhhHhhhcCcccC-ccceEEEEECCEEEEEEcC-------CCEEEEEECcccEEEEEcCCCCCC--
Confidence 4789999999887542100 000000 1123566679999999752 35799999998876 335332222
Q ss_pred eeeeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCcc----CcCceeEEEECCEEEEEeCcccCCCCceee
Q 018336 179 FFAAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQ----ERDECEAVVIGSEFWVVSGYKTERQGIFDE 253 (358)
Q Consensus 179 ~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~----~~~~~~~~~~~~~lyv~gG~~~~~~~~~~~ 253 (358)
...+. .++++|+.... ...+.++|+.+++-...-+... ......++..++++|+..-. ..+
T Consensus 87 -~~i~~~~~g~lyv~~~~------~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~-------~~~ 152 (328)
T 3dsm_A 87 -RYIHFLSDEKAYVTQIW------DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWS-------YQN 152 (328)
T ss_dssp -EEEEEEETTEEEEEEBS------CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECT-------TCC
T ss_pred -cEEEEeCCCeEEEEECC------CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCC-------CCC
Confidence 23333 67899998632 2579999999887543211111 00222344578899998521 134
Q ss_pred eeEEEECCCCceEEcCCccccCCCCCceeeeeecCccCceeccccceeeceEEEEeCCeEEEECCCCCCC------CceE
Q 018336 254 SAESYQLGTGEWKRAENAWKLSQCPRSNVGVGREGKLFCWAETEAAVQFGTCRVELGGCTLVTGSGYQGG------PQEF 327 (358)
Q Consensus 254 ~i~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~d~~~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~~~------~~~i 327 (358)
.+.++|+.+++....-... ..+.. + .+.-++++|+........ ...+
T Consensus 153 ~v~viD~~t~~~~~~i~~g---~~p~~---i---------------------~~~~dG~l~v~~~~~~~~~~~~~~~~~v 205 (328)
T 3dsm_A 153 RILKIDTETDKVVDELTIG---IQPTS---L---------------------VMDKYNKMWTITDGGYEGSPYGYEAPSL 205 (328)
T ss_dssp EEEEEETTTTEEEEEEECS---SCBCC---C---------------------EECTTSEEEEEBCCBCTTCSSCBCCCEE
T ss_pred EEEEEECCCCeEEEEEEcC---CCccc---e---------------------EEcCCCCEEEEECCCccCCccccCCceE
Confidence 6889999998754322211 01111 1 233468888875322110 1589
Q ss_pred EEEECCCCceEee-cCC
Q 018336 328 YVVEGRNGKFRKF-DVP 343 (358)
Q Consensus 328 ~~yd~~~~~W~~~-~~p 343 (358)
+++|+++++.... .+|
T Consensus 206 ~~id~~t~~v~~~~~~~ 222 (328)
T 3dsm_A 206 YRIDAETFTVEKQFKFK 222 (328)
T ss_dssp EEEETTTTEEEEEEECC
T ss_pred EEEECCCCeEEEEEecC
Confidence 9999998886543 444
No 27
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.64 E-value=0.0033 Score=52.76 Aligned_cols=154 Identities=5% Similarity=-0.099 Sum_probs=96.6
Q ss_pred eEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEEECCEEEEEcCcCCCCCCCCeEEEEEC
Q 018336 131 CQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGELNGRVIIAGGHDENKTALSSAWAYDL 210 (358)
Q Consensus 131 ~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~ 210 (358)
.++...++.||+..|.. ..+.++|+.|++-..-- ++......+.+..+++||++... .+.+.+||+
T Consensus 58 qGL~~~~~~Ly~stG~~-------g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~------~~~v~V~D~ 123 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQ-------GTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWT------EGLLFTWSG 123 (268)
T ss_dssp EEEEEETTEEEEEETTT-------TEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESS------SCEEEEEET
T ss_pred ceEEEECCEEEEEcCCC-------CEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEcc------CCEEEEEEC
Confidence 45666789999998853 24899999998753322 44433445567778999998432 357999999
Q ss_pred CCCceEecCCCccCcCceeEEEECCEEEEEeCcccCCCCceeeeeEEEECCCCceEE-cCCccccCCCCCceeeeeecCc
Q 018336 211 IKDEWTELARMTQERDECEAVVIGSEFWVVSGYKTERQGIFDESAESYQLGTGEWKR-AENAWKLSQCPRSNVGVGREGK 289 (358)
Q Consensus 211 ~t~~W~~~~~~p~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~-~~~~p~~~~~~~~~~~~~~d~~ 289 (358)
++.+-. ..++.+..+.+++.-+++||+.-| .+.+..+|+++.+-.. +..- . .++..
T Consensus 124 ~Tl~~~--~ti~~~~eGwGLt~Dg~~L~vSdG---------s~~l~~iDp~T~~v~~~I~V~-~---~g~~v-------- 180 (268)
T 3nok_A 124 MPPQRE--RTTRYSGEGWGLCYWNGKLVRSDG---------GTMLTFHEPDGFALVGAVQVK-L---RGQPV-------- 180 (268)
T ss_dssp TTTEEE--EEEECSSCCCCEEEETTEEEEECS---------SSEEEEECTTTCCEEEEEECE-E---TTEEC--------
T ss_pred CcCcEE--EEEeCCCceeEEecCCCEEEEECC---------CCEEEEEcCCCCeEEEEEEeC-C---CCccc--------
Confidence 986543 223333345566677788999865 2367899999875432 2211 0 00000
Q ss_pred cCceeccccceeeceEEEEeCCeEEEECCCCCCCCceEEEEECCCCc
Q 018336 290 LFCWAETEAAVQFGTCRVELGGCTLVTGSGYQGGPQEFYVVEGRNGK 336 (358)
Q Consensus 290 ~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~~~~~~i~~yd~~~~~ 336 (358)
....-+...+++||+---.. +.|.+.|+++++
T Consensus 181 -----------~~lNeLe~~dG~lyanvw~s----~~I~vIDp~TG~ 212 (268)
T 3nok_A 181 -----------ELINELECANGVIYANIWHS----SDVLEIDPATGT 212 (268)
T ss_dssp -----------CCEEEEEEETTEEEEEETTC----SEEEEECTTTCB
T ss_pred -----------ccccccEEeCCEEEEEECCC----CeEEEEeCCCCc
Confidence 00111234588988644222 689999999987
No 28
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.62 E-value=0.012 Score=51.29 Aligned_cols=183 Identities=11% Similarity=-0.032 Sum_probs=103.2
Q ss_pred ceEEEEeCCCCCe-eecCCCCCCCCCCCceeEEEE-ECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEe-CCCCC--CC
Q 018336 102 YGVTVFDPVSLTW-DRLGPVPEYPAGLPLFCQVAS-SQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTR-GKNMP--DN 176 (358)
Q Consensus 102 ~~~~~~d~~~~~W-~~~~~~~~~~~~~~~~~~~~~-~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~-~~~~~--~~ 176 (358)
..+.++|+.+.+- ..++.... ...++. .++++|+.... ...+.++|+.+++-.. ++.-. ..
T Consensus 64 ~~v~viD~~t~~~~~~i~~~~~-------p~~i~~~~~g~lyv~~~~-------~~~v~~iD~~t~~~~~~i~~g~~~~~ 129 (328)
T 3dsm_A 64 HVIFAIDINTFKEVGRITGFTS-------PRYIHFLSDEKAYVTQIW-------DYRIFIINPKTYEITGYIECPDMDME 129 (328)
T ss_dssp TEEEEEETTTCCEEEEEECCSS-------EEEEEEEETTEEEEEEBS-------CSEEEEEETTTTEEEEEEECTTCCTT
T ss_pred CEEEEEECcccEEEEEcCCCCC-------CcEEEEeCCCeEEEEECC-------CCeEEEEECCCCeEEEEEEcCCcccc
Confidence 4788999998876 33432222 124444 67899998742 3579999999987543 22111 00
Q ss_pred -ceeeeeEEECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEE-EECCEEEEEeCcccCCC--Ccee
Q 018336 177 -RSFFAAGELNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAV-VIGSEFWVVSGYKTERQ--GIFD 252 (358)
Q Consensus 177 -~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~-~~~~~lyv~gG~~~~~~--~~~~ 252 (358)
..-..++..++++|+..- . ....+.++|+.+++....-+... ....++ .-+|++|+......... ..-.
T Consensus 130 ~~~p~~i~~~~~~lyv~~~-~----~~~~v~viD~~t~~~~~~i~~g~--~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~ 202 (328)
T 3dsm_A 130 SGSTEQMVQYGKYVYVNCW-S----YQNRILKIDTETDKVVDELTIGI--QPTSLVMDKYNKMWTITDGGYEGSPYGYEA 202 (328)
T ss_dssp TCBCCCEEEETTEEEEEEC-T----TCCEEEEEETTTTEEEEEEECSS--CBCCCEECTTSEEEEEBCCBCTTCSSCBCC
T ss_pred CCCcceEEEECCEEEEEcC-C----CCCEEEEEECCCCeEEEEEEcCC--CccceEEcCCCCEEEEECCCccCCccccCC
Confidence 022234447899999842 0 13579999999987653222211 111222 33688888864321110 0002
Q ss_pred eeeEEEECCCCceEEcCCccccCCCCCceeeeeecCccCceeccccceeeceEEEEe--CCeEEEECCCCCCCCceEEEE
Q 018336 253 ESAESYQLGTGEWKRAENAWKLSQCPRSNVGVGREGKLFCWAETEAAVQFGTCRVEL--GGCTLVTGSGYQGGPQEFYVV 330 (358)
Q Consensus 253 ~~i~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~d~~~~~W~~lp~~~r~~~~~~~~--~~~i~v~gG~~~~~~~~i~~y 330 (358)
..+.++|+.+++....-..+... .+ ..++.. ++.||+..+ .++++
T Consensus 203 ~~v~~id~~t~~v~~~~~~~~g~-~p-------------------------~~la~~~d~~~lyv~~~-------~v~~~ 249 (328)
T 3dsm_A 203 PSLYRIDAETFTVEKQFKFKLGD-WP-------------------------SEVQLNGTRDTLYWINN-------DIWRM 249 (328)
T ss_dssp CEEEEEETTTTEEEEEEECCTTC-CC-------------------------EEEEECTTSCEEEEESS-------SEEEE
T ss_pred ceEEEEECCCCeEEEEEecCCCC-Cc-------------------------eeEEEecCCCEEEEEcc-------EEEEE
Confidence 57899999988765322222110 11 112323 567888754 68899
Q ss_pred ECCCCceE
Q 018336 331 EGRNGKFR 338 (358)
Q Consensus 331 d~~~~~W~ 338 (358)
|+++++..
T Consensus 250 d~~t~~~~ 257 (328)
T 3dsm_A 250 PVEADRVP 257 (328)
T ss_dssp ETTCSSCC
T ss_pred ECCCCcee
Confidence 99887753
No 29
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.62 E-value=0.0018 Score=53.76 Aligned_cols=113 Identities=12% Similarity=-0.037 Sum_probs=81.3
Q ss_pred eeeeEEECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEEECCEEEEEeCcccCCCCceeeeeEEE
Q 018336 179 FFAAGELNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVVIGSEFWVVSGYKTERQGIFDESAESY 258 (358)
Q Consensus 179 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~~~i~~y 258 (358)
-.++...++.+|+..|.... +.+.++|+++++=..--+++....+.+++..+++||++... .+.+++|
T Consensus 23 tqGL~~~~~~LyestG~~g~----S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~--------~~~v~v~ 90 (243)
T 3mbr_X 23 TEGLFYLRGHLYESTGETGR----SSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWR--------NHEGFVY 90 (243)
T ss_dssp EEEEEEETTEEEEEECCTTS----CEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS--------SSEEEEE
T ss_pred cccEEEECCEEEEECCCCCC----ceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEee--------CCEEEEE
Confidence 34667778999999886532 67999999999877655677666777788899999999643 3578899
Q ss_pred ECCCCceEEcCCccccCCCCCceeeeeecCccCceeccccceeeceEEEEeCCeEEEECCCCCCCCceEEEEECCCCc
Q 018336 259 QLGTGEWKRAENAWKLSQCPRSNVGVGREGKLFCWAETEAAVQFGTCRVELGGCTLVTGSGYQGGPQEFYVVEGRNGK 336 (358)
Q Consensus 259 d~~~~~W~~~~~~p~~~~~~~~~~~~~~d~~~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~~~~~~i~~yd~~~~~ 336 (358)
|+++.+- +..++... . +-+++.-+++||+.-|. +.++++|+++.+
T Consensus 91 D~~tl~~--~~ti~~~~-~-------------------------Gwglt~dg~~L~vSdgs-----~~l~~iDp~t~~ 135 (243)
T 3mbr_X 91 DLATLTP--RARFRYPG-E-------------------------GWALTSDDSHLYMSDGT-----AVIRKLDPDTLQ 135 (243)
T ss_dssp ETTTTEE--EEEEECSS-C-------------------------CCEEEECSSCEEEECSS-----SEEEEECTTTCC
T ss_pred ECCcCcE--EEEEeCCC-C-------------------------ceEEeeCCCEEEEECCC-----CeEEEEeCCCCe
Confidence 9988653 22322111 1 12345667889998774 589999999876
No 30
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.54 E-value=0.014 Score=49.23 Aligned_cols=157 Identities=12% Similarity=-0.026 Sum_probs=93.2
Q ss_pred eEEEEEC-CEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEEECCEEEEEcCcCCCCCCCCeEEEEE
Q 018336 131 CQVASSQ-GKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGELNGRVIIAGGHDENKTALSSAWAYD 209 (358)
Q Consensus 131 ~~~~~~~-~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd 209 (358)
++++..+ +.||+..|..+ .+.+.++|+.|++-..--+++......+.+..++.+|+..- ..+.+.+||
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~-----~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~------~~~~v~viD 92 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYG-----RSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVW------LKNIGFIYD 92 (266)
T ss_dssp EEEEECSTTEEEEEECSTT-----TCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEET------TCSEEEEEE
T ss_pred ccEEEeCCCeEEEECCCCC-----CCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEe------cCCEEEEEE
Confidence 3555555 89999877422 35899999999886543333333344456667889999942 236799999
Q ss_pred CCCCceEecCCCccC-cCceeEEEECCEEEEEeCcccCCCCceeeeeEEEECCCCceE-EcCCccccCCCCCceeeeeec
Q 018336 210 LIKDEWTELARMTQE-RDECEAVVIGSEFWVVSGYKTERQGIFDESAESYQLGTGEWK-RAENAWKLSQCPRSNVGVGRE 287 (358)
Q Consensus 210 ~~t~~W~~~~~~p~~-~~~~~~~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~-~~~~~p~~~~~~~~~~~~~~d 287 (358)
+.+.+= +..++.+ ..+.+++.-++++|+..| .+.+.++|+++.+-. .+..- . .++.
T Consensus 93 ~~t~~v--~~~i~~g~~~g~glt~Dg~~l~vs~g---------s~~l~viD~~t~~v~~~I~Vg-~---~~~p------- 150 (266)
T 2iwa_A 93 RRTLSN--IKNFTHQMKDGWGLATDGKILYGSDG---------TSILYEIDPHTFKLIKKHNVK-Y---NGHR------- 150 (266)
T ss_dssp TTTTEE--EEEEECCSSSCCEEEECSSSEEEECS---------SSEEEEECTTTCCEEEEEECE-E---TTEE-------
T ss_pred CCCCcE--EEEEECCCCCeEEEEECCCEEEEECC---------CCeEEEEECCCCcEEEEEEEC-C---CCcc-------
Confidence 987643 2223222 233344444556887753 346889999886532 22211 0 0000
Q ss_pred CccCceeccccceeeceEEEEeCCeEEEECCCCCCCCceEEEEECCCCc
Q 018336 288 GKLFCWAETEAAVQFGTCRVELGGCTLVTGSGYQGGPQEFYVVEGRNGK 336 (358)
Q Consensus 288 ~~~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~~~~~~i~~yd~~~~~ 336 (358)
......+...+++||+--... +.|.+.|+++++
T Consensus 151 ------------~~~~nele~~dg~lyvn~~~~----~~V~vID~~tg~ 183 (266)
T 2iwa_A 151 ------------VIRLNELEYINGEVWANIWQT----DCIARISAKDGT 183 (266)
T ss_dssp ------------CCCEEEEEEETTEEEEEETTS----SEEEEEETTTCC
T ss_pred ------------cccceeEEEECCEEEEecCCC----CeEEEEECCCCc
Confidence 000112233488998765433 689999999887
No 31
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.47 E-value=0.027 Score=50.00 Aligned_cols=172 Identities=14% Similarity=0.205 Sum_probs=100.7
Q ss_pred ceEEEEeCCCCC--eeecCCCCCCCCCCCceeEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCCc--EEeCCCCCC--
Q 018336 102 YGVTVFDPVSLT--WDRLGPVPEYPAGLPLFCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRR--WTRGKNMPD-- 175 (358)
Q Consensus 102 ~~~~~~d~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~-- 175 (358)
..+.++|+.+++ |+.-..-.. ....+..++.||+... ...++.+|+.+.+ |+.-...+.
T Consensus 113 g~l~a~d~~tG~~~W~~~~~~~~-------~~~p~~~~~~v~v~~~--------~g~l~~~d~~tG~~~W~~~~~~~~~~ 177 (376)
T 3q7m_A 113 AQVYALNTSDGTVAWQTKVAGEA-------LSRPVVSDGLVLIHTS--------NGQLQALNEADGAVKWTVNLDMPSLS 177 (376)
T ss_dssp SEEEEEETTTCCEEEEEECSSCC-------CSCCEEETTEEEEECT--------TSEEEEEETTTCCEEEEEECCC----
T ss_pred CEEEEEECCCCCEEEEEeCCCce-------EcCCEEECCEEEEEcC--------CCeEEEEECCCCcEEEEEeCCCCcee
Confidence 368999998775 654322111 1123455788887643 2379999998875 765432221
Q ss_pred CceeeeeEEECCEEEEEcCcCCCCCCCCeEEEEECCCC--ceEecCCCccCc--------CceeEEEECCEEEEEeCccc
Q 018336 176 NRSFFAAGELNGRVIIAGGHDENKTALSSAWAYDLIKD--EWTELARMTQER--------DECEAVVIGSEFWVVSGYKT 245 (358)
Q Consensus 176 ~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~--~W~~~~~~p~~~--------~~~~~~~~~~~lyv~gG~~~ 245 (358)
.+.....+..++.+|+. .. ...+..||+.++ .|+.-...+... .....+..++.+|+.+.
T Consensus 178 ~~~~~~~~~~~~~v~~g-~~------~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~--- 247 (376)
T 3q7m_A 178 LRGESAPTTAFGAAVVG-GD------NGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAY--- 247 (376)
T ss_dssp -CCCCCCEEETTEEEEC-CT------TTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECT---
T ss_pred ecCCCCcEEECCEEEEE-cC------CCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEec---
Confidence 12223344557777763 21 246999999766 477543322111 12334567888888752
Q ss_pred CCCCceeeeeEEEECCCCc--eEEcCCccccCCCCCceeeeeecCccCceeccccceeeceEEEEeCCeEEEECCCCCCC
Q 018336 246 ERQGIFDESAESYQLGTGE--WKRAENAWKLSQCPRSNVGVGREGKLFCWAETEAAVQFGTCRVELGGCTLVTGSGYQGG 323 (358)
Q Consensus 246 ~~~~~~~~~i~~yd~~~~~--W~~~~~~p~~~~~~~~~~~~~~d~~~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~~~ 323 (358)
...+.++|+.+++ |+.-... ....+..++.||+....
T Consensus 248 ------~g~l~~~d~~tG~~~w~~~~~~-------------------------------~~~~~~~~~~l~~~~~~---- 286 (376)
T 3q7m_A 248 ------NGNLTALDLRSGQIMWKRELGS-------------------------------VNDFIVDGNRIYLVDQN---- 286 (376)
T ss_dssp ------TSCEEEEETTTCCEEEEECCCC-------------------------------EEEEEEETTEEEEEETT----
T ss_pred ------CcEEEEEECCCCcEEeeccCCC-------------------------------CCCceEECCEEEEEcCC----
Confidence 2357899998774 7643211 01235568899887643
Q ss_pred CceEEEEECCCCc--eEee
Q 018336 324 PQEFYVVEGRNGK--FRKF 340 (358)
Q Consensus 324 ~~~i~~yd~~~~~--W~~~ 340 (358)
..++.||+.+++ |+.-
T Consensus 287 -g~l~~~d~~tG~~~w~~~ 304 (376)
T 3q7m_A 287 -DRVMALTIDGGVTLWTQS 304 (376)
T ss_dssp -CCEEEEETTTCCEEEEEC
T ss_pred -CeEEEEECCCCcEEEeec
Confidence 479999998776 7653
No 32
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=97.46 E-value=3.8e-05 Score=64.96 Aligned_cols=47 Identities=13% Similarity=0.145 Sum_probs=42.7
Q ss_pred CCCCCcHHHHHHHhccCCcchhhhHHhhcHhHHHhhcChhhHHHHHh
Q 018336 26 LVPGLPEEISLECLTRLHYSTHRVATRVSRRWRQLIQSRDFYYQRKQ 72 (358)
Q Consensus 26 ~~~~Lp~d~~~~il~rlp~~~~~~~~~v~k~w~~l~~s~~f~~~~~~ 72 (358)
.|..||+|++..||+.|++++++++..|||.|+.+..++.+++....
T Consensus 4 ~l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~ 50 (312)
T 3l2o_B 4 TLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLL 50 (312)
T ss_dssp HHHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHH
T ss_pred hhHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHh
Confidence 35679999999999999999999999999999999999998876544
No 33
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.25 E-value=0.0028 Score=53.10 Aligned_cols=112 Identities=6% Similarity=-0.134 Sum_probs=76.7
Q ss_pred eeeEEECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEEECCEEEEEeCcccCCCCceeeeeEEEE
Q 018336 180 FAAGELNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVVIGSEFWVVSGYKTERQGIFDESAESYQ 259 (358)
Q Consensus 180 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~~~i~~yd 259 (358)
.++...++.+|+..|.... +.+.++|+++++=..--+++...++.+++..+++||+.... .+.+.+||
T Consensus 46 qGL~~~~~~LyestG~~g~----S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~--------~~~v~v~D 113 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLNGR----SSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWK--------NGLGFVWN 113 (262)
T ss_dssp EEEEEETTEEEEEEEETTE----EEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS--------SSEEEEEE
T ss_pred ceEEEECCEEEEECCCCCC----ceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEee--------CCEEEEEE
Confidence 4555568999999885432 57999999999866544566555566678899999999653 34688999
Q ss_pred CCCCceEEcCCccccCCCCCceeeeeecCccCceeccccceeeceEEEEeCCeEEEECCCCCCCCceEEEEECCCCc
Q 018336 260 LGTGEWKRAENAWKLSQCPRSNVGVGREGKLFCWAETEAAVQFGTCRVELGGCTLVTGSGYQGGPQEFYVVEGRNGK 336 (358)
Q Consensus 260 ~~~~~W~~~~~~p~~~~~~~~~~~~~~d~~~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~~~~~~i~~yd~~~~~ 336 (358)
+++.+-. ..++... . +-+++.-++.||+.-|. +.++.+|+++.+
T Consensus 114 ~~t~~~~--~ti~~~~-e-------------------------G~glt~dg~~L~~SdGs-----~~i~~iDp~T~~ 157 (262)
T 3nol_A 114 IRNLRQV--RSFNYDG-E-------------------------GWGLTHNDQYLIMSDGT-----PVLRFLDPESLT 157 (262)
T ss_dssp TTTCCEE--EEEECSS-C-------------------------CCCEEECSSCEEECCSS-----SEEEEECTTTCS
T ss_pred CccCcEE--EEEECCC-C-------------------------ceEEecCCCEEEEECCC-----CeEEEEcCCCCe
Confidence 9887543 2222111 1 11235556778887763 589999999866
No 34
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.04 E-value=0.15 Score=45.02 Aligned_cols=174 Identities=16% Similarity=0.175 Sum_probs=99.4
Q ss_pred ceEEEEeCCCCC--eeecCCCCCCCCCCCceeEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCCc--EEeCCCCCCCc
Q 018336 102 YGVTVFDPVSLT--WDRLGPVPEYPAGLPLFCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRR--WTRGKNMPDNR 177 (358)
Q Consensus 102 ~~~~~~d~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~~ 177 (358)
..+.++|+.+++ |..-...+... .......+..++.||+... ...++.+|+.+.+ |+.-...+...
T Consensus 153 g~l~~~d~~tG~~~W~~~~~~~~~~--~~~~~~~~~~~~~v~~g~~--------~g~l~~~d~~tG~~~w~~~~~~~~~~ 222 (376)
T 3q7m_A 153 GQLQALNEADGAVKWTVNLDMPSLS--LRGESAPTTAFGAAVVGGD--------NGRVSAVLMEQGQMIWQQRISQATGS 222 (376)
T ss_dssp SEEEEEETTTCCEEEEEECCC-------CCCCCCEEETTEEEECCT--------TTEEEEEETTTCCEEEEEECCC----
T ss_pred CeEEEEECCCCcEEEEEeCCCCcee--ecCCCCcEEECCEEEEEcC--------CCEEEEEECCCCcEEEEEecccCCCC
Confidence 368899998876 76544322110 0111233445777776322 2368999998764 65532222111
Q ss_pred --------eeeeeEEECCEEEEEcCcCCCCCCCCeEEEEECCCC--ceEecCCCccCcCceeEEEECCEEEEEeCcccCC
Q 018336 178 --------SFFAAGELNGRVIIAGGHDENKTALSSAWAYDLIKD--EWTELARMTQERDECEAVVIGSEFWVVSGYKTER 247 (358)
Q Consensus 178 --------~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~--~W~~~~~~p~~~~~~~~~~~~~~lyv~gG~~~~~ 247 (358)
.....+..++.+|+.+. ...+.++|+.++ .|+.-.. .....+..++.+|+...
T Consensus 223 ~~~~~~~~~~~~p~~~~~~v~~~~~-------~g~l~~~d~~tG~~~w~~~~~-----~~~~~~~~~~~l~~~~~----- 285 (376)
T 3q7m_A 223 TEIDRLSDVDTTPVVVNGVVFALAY-------NGNLTALDLRSGQIMWKRELG-----SVNDFIVDGNRIYLVDQ----- 285 (376)
T ss_dssp -------CCCCCCEEETTEEEEECT-------TSCEEEEETTTCCEEEEECCC-----CEEEEEEETTEEEEEET-----
T ss_pred cccccccccCCCcEEECCEEEEEec-------CcEEEEEECCCCcEEeeccCC-----CCCCceEECCEEEEEcC-----
Confidence 12333456888888742 235899999876 4764321 12235567888998863
Q ss_pred CCceeeeeEEEECCCCc--eEEcCCccccCCCCCceeeeeecCccCceeccccceeeceEEEEeCCeEEEECCCCCCCCc
Q 018336 248 QGIFDESAESYQLGTGE--WKRAENAWKLSQCPRSNVGVGREGKLFCWAETEAAVQFGTCRVELGGCTLVTGSGYQGGPQ 325 (358)
Q Consensus 248 ~~~~~~~i~~yd~~~~~--W~~~~~~p~~~~~~~~~~~~~~d~~~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~~~~~ 325 (358)
...+.+||+.+++ |+.-... .. . ..+.+..++.||+.... .
T Consensus 286 ----~g~l~~~d~~tG~~~w~~~~~~-~~-----~----------------------~~~~~~~~~~l~v~~~~-----g 328 (376)
T 3q7m_A 286 ----NDRVMALTIDGGVTLWTQSDLL-HR-----L----------------------LTSPVLYNGNLVVGDSE-----G 328 (376)
T ss_dssp ----TCCEEEEETTTCCEEEEECTTT-TS-----C----------------------CCCCEEETTEEEEECTT-----S
T ss_pred ----CCeEEEEECCCCcEEEeecccC-CC-----c----------------------ccCCEEECCEEEEEeCC-----C
Confidence 2357899998875 7653211 00 0 01124568888876542 4
Q ss_pred eEEEEECCCCc--eEe
Q 018336 326 EFYVVEGRNGK--FRK 339 (358)
Q Consensus 326 ~i~~yd~~~~~--W~~ 339 (358)
.+++||+.+++ |+.
T Consensus 329 ~l~~~d~~tG~~~~~~ 344 (376)
T 3q7m_A 329 YLHWINVEDGRFVAQQ 344 (376)
T ss_dssp EEEEEETTTCCEEEEE
T ss_pred eEEEEECCCCcEEEEE
Confidence 79999998877 654
No 35
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=96.97 E-value=0.00036 Score=61.32 Aligned_cols=44 Identities=23% Similarity=0.360 Sum_probs=38.6
Q ss_pred cCCCCCCCcHHHHHHHhccCCcchhhhHHhhcHhHHHhhcChhh
Q 018336 23 FGELVPGLPEEISLECLTRLHYSTHRVATRVSRRWRQLIQSRDF 66 (358)
Q Consensus 23 ~~~~~~~Lp~d~~~~il~rlp~~~~~~~~~v~k~w~~l~~s~~f 66 (358)
....|..||+|++.+||.+|+..++.+++.|||+|+.+..++..
T Consensus 5 ~~~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~ 48 (336)
T 2ast_B 5 PGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESL 48 (336)
T ss_dssp --CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTT
T ss_pred ccCChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchh
Confidence 34578999999999999999999999999999999999877653
No 36
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.87 E-value=0.14 Score=44.36 Aligned_cols=208 Identities=13% Similarity=-0.020 Sum_probs=99.4
Q ss_pred ceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEE-CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCC-----
Q 018336 102 YGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASS-QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPD----- 175 (358)
Q Consensus 102 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~----- 175 (358)
..+..+|+.+.+-...-+....+ .. ....- ++.+|+.+.. ...+++||+.+.+-...-+.+.
T Consensus 69 ~~v~~~d~~~~~~~~~~~~~~~~----~~-~~~s~dg~~l~v~~~~-------~~~v~~~d~~~~~~~~~~~~~~~~~~~ 136 (353)
T 3vgz_A 69 GVVYRLDPVTLEVTQAIHNDLKP----FG-ATINNTTQTLWFGNTV-------NSAVTAIDAKTGEVKGRLVLDDRKRTE 136 (353)
T ss_dssp EEEEEECTTTCCEEEEEEESSCC----CS-EEEETTTTEEEEEETT-------TTEEEEEETTTCCEEEEEESCCCCCCS
T ss_pred ccEEEEcCCCCeEEEEEecCCCc----ce-EEECCCCCEEEEEecC-------CCEEEEEeCCCCeeEEEEecCCCcccc
Confidence 47889999888754432222211 11 22233 3558887653 2479999999877533211111
Q ss_pred ---CceeeeeEEE--CCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEE-EECCE-EEEEeCcccCCC
Q 018336 176 ---NRSFFAAGEL--NGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAV-VIGSE-FWVVSGYKTERQ 248 (358)
Q Consensus 176 ---~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~-~~~~~-lyv~gG~~~~~~ 248 (358)
+..-...+.. ++.+|+.+... ...+++||+.+.+-...-+.... ....++ .-+++ +|+...
T Consensus 137 ~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~------ 204 (353)
T 3vgz_A 137 EVRPLQPRELVADDATNTVYISGIGK-----ESVIWVVDGGNIKLKTAIQNTGK-MSTGLALDSEGKRLYTTNA------ 204 (353)
T ss_dssp SCCCCEEEEEEEETTTTEEEEEEESS-----SCEEEEEETTTTEEEEEECCCCT-TCCCCEEETTTTEEEEECT------
T ss_pred ccCCCCCceEEECCCCCEEEEEecCC-----CceEEEEcCCCCceEEEecCCCC-ccceEEECCCCCEEEEEcC------
Confidence 1112223332 45677775221 24699999987754332221111 112222 33444 665542
Q ss_pred CceeeeeEEEECCCCceEEcCCccccC-----------CCCCce-e-------eeeecCccCce-eccccceeeceEEEE
Q 018336 249 GIFDESAESYQLGTGEWKRAENAWKLS-----------QCPRSN-V-------GVGREGKLFCW-AETEAAVQFGTCRVE 308 (358)
Q Consensus 249 ~~~~~~i~~yd~~~~~W~~~~~~p~~~-----------~~~~~~-~-------~~~~d~~~~~W-~~lp~~~r~~~~~~~ 308 (358)
...+.+||+.+++-.......... +..+.. + ...||.++.+. ..++.......+...
T Consensus 205 ---~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~s~ 281 (353)
T 3vgz_A 205 ---DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNP 281 (353)
T ss_dssp ---TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCCEEEET
T ss_pred ---CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCceEEECC
Confidence 125667888776532211110000 001100 0 01566665544 222222112222222
Q ss_pred eCCeEEEECCCCCCCCceEEEEECCCCceEee
Q 018336 309 LGGCTLVTGSGYQGGPQEFYVVEGRNGKFRKF 340 (358)
Q Consensus 309 ~~~~i~v~gG~~~~~~~~i~~yd~~~~~W~~~ 340 (358)
-++.+|+.+... ..+.+||..+.+....
T Consensus 282 dg~~l~v~~~~~----~~v~~~d~~~~~~~~~ 309 (353)
T 3vgz_A 282 ARNEAYVTHRQA----GKVSVIDAKSYKVVKT 309 (353)
T ss_dssp TTTEEEEEETTT----TEEEEEETTTTEEEEE
T ss_pred CCCEEEEEECCC----CeEEEEECCCCeEEEE
Confidence 244577776433 5899999988775443
No 37
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=96.77 E-value=0.037 Score=49.06 Aligned_cols=135 Identities=13% Similarity=0.031 Sum_probs=72.7
Q ss_pred ceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEE--CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCcee
Q 018336 102 YGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASS--QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSF 179 (358)
Q Consensus 102 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~--~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~ 179 (358)
..+..||..+++-...-.... . ..+++.. +..||+.++. ...+.+||..+++....-..+. .-
T Consensus 12 ~~v~v~d~~~~~~~~~~~~~~-----~-~~~~~~s~dg~~l~~~~~~-------d~~i~v~d~~~~~~~~~~~~~~--~v 76 (391)
T 1l0q_A 12 DNISVIDVTSNKVTATIPVGS-----N-PMGAVISPDGTKVYVANAH-------SNDVSIIDTATNNVIATVPAGS--SP 76 (391)
T ss_dssp TEEEEEETTTTEEEEEEECSS-----S-EEEEEECTTSSEEEEEEGG-------GTEEEEEETTTTEEEEEEECSS--SE
T ss_pred CEEEEEECCCCeEEEEeecCC-----C-cceEEECCCCCEEEEECCC-------CCeEEEEECCCCeEEEEEECCC--Cc
Confidence 368899998876543322221 1 1133332 3457777653 2479999998877644322222 11
Q ss_pred eeeEEE--CCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEE-ECCE-EEEEeCcccCCCCceeeee
Q 018336 180 FAAGEL--NGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVV-IGSE-FWVVSGYKTERQGIFDESA 255 (358)
Q Consensus 180 ~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~-~~~~-lyv~gG~~~~~~~~~~~~i 255 (358)
..++.. +..+|+.+..+ ..+.+||+.+++-...-... .....++. -+++ +|+.++. ...+
T Consensus 77 ~~~~~spdg~~l~~~~~~~------~~v~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~--------~~~v 140 (391)
T 1l0q_A 77 QGVAVSPDGKQVYVTNMAS------STLSVIDTTSNTVAGTVKTG--KSPLGLALSPDGKKLYVTNNG--------DKTV 140 (391)
T ss_dssp EEEEECTTSSEEEEEETTT------TEEEEEETTTTEEEEEEECS--SSEEEEEECTTSSEEEEEETT--------TTEE
T ss_pred cceEECCCCCEEEEEECCC------CEEEEEECCCCeEEEEEeCC--CCcceEEECCCCCEEEEEeCC--------CCEE
Confidence 222222 34566665322 46999999987654332221 11122222 2444 6677643 2367
Q ss_pred EEEECCCCceEE
Q 018336 256 ESYQLGTGEWKR 267 (358)
Q Consensus 256 ~~yd~~~~~W~~ 267 (358)
..||+.+++...
T Consensus 141 ~~~d~~~~~~~~ 152 (391)
T 1l0q_A 141 SVINTVTKAVIN 152 (391)
T ss_dssp EEEETTTTEEEE
T ss_pred EEEECCCCcEEE
Confidence 889998876543
No 38
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=96.65 E-value=0.14 Score=46.13 Aligned_cols=215 Identities=11% Similarity=0.032 Sum_probs=106.7
Q ss_pred ceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeee
Q 018336 102 YGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFA 181 (358)
Q Consensus 102 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~ 181 (358)
..+..+|.....-..+..... ........-++..+++++.+.. ...++++|..+.+...+...+.. ..+
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~-----~v~~~~~Spdg~~la~~s~~~~----~~~i~~~d~~tg~~~~l~~~~~~--~~~ 227 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQ-----PLMSPAWSPDGSKLAYVTFESG----RSALVIQTLANGAVRQVASFPRH--NGA 227 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESS-----CEEEEEECTTSSEEEEEECTTS----SCEEEEEETTTCCEEEEECCSSC--EEE
T ss_pred ceEEEEcCCCCCCEEEeCCCC-----cceeeEEcCCCCEEEEEEecCC----CcEEEEEECCCCcEEEeecCCCc--ccC
Confidence 467788877654444332111 1111112224554444443321 34899999999887765443321 122
Q ss_pred eEEE-CC-EEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEE--ECCEEEEEeCcccCCCCceeeeeEE
Q 018336 182 AGEL-NG-RVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVV--IGSEFWVVSGYKTERQGIFDESAES 257 (358)
Q Consensus 182 ~~~~-~~-~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~--~~~~lyv~gG~~~~~~~~~~~~i~~ 257 (358)
.+.. ++ .|++.+..+. ...++++|..++..+.+..... ...... -+|+.+++++.... ...++.
T Consensus 228 ~~~spdg~~la~~~~~~g----~~~i~~~d~~~~~~~~l~~~~~---~~~~~~~spdg~~l~~~s~~~g-----~~~i~~ 295 (415)
T 2hqs_A 228 PAFSPDGSKLAFALSKTG----SLNLYVMDLASGQIRQVTDGRS---NNTEPTWFPDSQNLAFTSDQAG-----RPQVYK 295 (415)
T ss_dssp EEECTTSSEEEEEECTTS----SCEEEEEETTTCCEEECCCCSS---CEEEEEECTTSSEEEEEECTTS-----SCEEEE
T ss_pred EEEcCCCCEEEEEEecCC----CceEEEEECCCCCEEeCcCCCC---cccceEECCCCCEEEEEECCCC-----CcEEEE
Confidence 2222 44 4555544322 2579999999888776654321 112222 25654444332111 235777
Q ss_pred EECCCCceEEcCCccc------cCCCCCcee----------eeeecCccCceeccccceeeceEEEEeCCeEEEECCCCC
Q 018336 258 YQLGTGEWKRAENAWK------LSQCPRSNV----------GVGREGKLFCWAETEAAVQFGTCRVELGGCTLVTGSGYQ 321 (358)
Q Consensus 258 yd~~~~~W~~~~~~p~------~~~~~~~~~----------~~~~d~~~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~ 321 (358)
+|..+++-..+..... -.+..+... ...+|.++.+...+............-+++.+++++...
T Consensus 296 ~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~spdg~~l~~~s~~~ 375 (415)
T 2hqs_A 296 VNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG 375 (415)
T ss_dssp EETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCSSSCEEEEECTTSSEEEEEEEET
T ss_pred EECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEecCCCCcCCeEEcCCCCEEEEEEcCC
Confidence 8887766444322100 001111111 114566665554444332222223344677666665432
Q ss_pred CCCceEEEEECCCCceEee
Q 018336 322 GGPQEFYVVEGRNGKFRKF 340 (358)
Q Consensus 322 ~~~~~i~~yd~~~~~W~~~ 340 (358)
+ ...++++|...+..+.+
T Consensus 376 ~-~~~l~~~d~~g~~~~~l 393 (415)
T 2hqs_A 376 M-GSVLNLVSTDGRFKARL 393 (415)
T ss_dssp T-EEEEEEEETTSCCEEEC
T ss_pred C-ccEEEEEECCCCcEEEe
Confidence 1 25799999988877775
No 39
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.60 E-value=0.028 Score=47.09 Aligned_cols=109 Identities=8% Similarity=-0.069 Sum_probs=74.5
Q ss_pred eeeEEECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEEECCEEEEEeCcccCCCCceeeeeEEEE
Q 018336 180 FAAGELNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVVIGSEFWVVSGYKTERQGIFDESAESYQ 259 (358)
Q Consensus 180 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~~~i~~yd 259 (358)
.++...++.+|+..|... .+.++|+++++=..-- ++...++.+++..+++||+.... .+.+.+||
T Consensus 58 qGL~~~~~~Ly~stG~~g------~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~--------~~~v~V~D 122 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQG------TLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWT--------EGLLFTWS 122 (268)
T ss_dssp EEEEEETTEEEEEETTTT------EEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESS--------SCEEEEEE
T ss_pred ceEEEECCEEEEEcCCCC------EEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEcc--------CCEEEEEE
Confidence 455566899999987542 3999999998754433 55555556677888999999643 35789999
Q ss_pred CCCCceEEcCCccccCCCCCceeeeeecCccCceeccccceeeceEEEEeCCeEEEECCCCCCCCceEEEEECCCCc
Q 018336 260 LGTGEWKRAENAWKLSQCPRSNVGVGREGKLFCWAETEAAVQFGTCRVELGGCTLVTGSGYQGGPQEFYVVEGRNGK 336 (358)
Q Consensus 260 ~~~~~W~~~~~~p~~~~~~~~~~~~~~d~~~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~~~~~~i~~yd~~~~~ 336 (358)
+++.+-. ..++... . +.+++.-+++||+.-|. +.++.+|+++.+
T Consensus 123 ~~Tl~~~--~ti~~~~-e-------------------------GwGLt~Dg~~L~vSdGs-----~~l~~iDp~T~~ 166 (268)
T 3nok_A 123 GMPPQRE--RTTRYSG-E-------------------------GWGLCYWNGKLVRSDGG-----TMLTFHEPDGFA 166 (268)
T ss_dssp TTTTEEE--EEEECSS-C-------------------------CCCEEEETTEEEEECSS-----SEEEEECTTTCC
T ss_pred CCcCcEE--EEEeCCC-c-------------------------eeEEecCCCEEEEECCC-----CEEEEEcCCCCe
Confidence 9886533 2222111 1 11345667889998874 689999999876
No 40
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=96.59 E-value=0.21 Score=42.21 Aligned_cols=176 Identities=9% Similarity=-0.010 Sum_probs=91.6
Q ss_pred ceEEEEeCCCCC--eeecCCCCCCCCCCCceeEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCCc--EEeCCCCCCCc
Q 018336 102 YGVTVFDPVSLT--WDRLGPVPEYPAGLPLFCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRR--WTRGKNMPDNR 177 (358)
Q Consensus 102 ~~~~~~d~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~~ 177 (358)
..+.++|+.+++ |+.-..-.. ......+.-++.+++.+ .+.+.+||+ +.+ |+.-.+ ...
T Consensus 15 ~~v~~~d~~tG~~~w~~~~~~~~-----~~~~~~~~pdG~ilvs~---------~~~V~~~d~-~G~~~W~~~~~--~~~ 77 (276)
T 3no2_A 15 NKIAIINKDTKEIVWEYPLEKGW-----ECNSVAATKAGEILFSY---------SKGAKMITR-DGRELWNIAAP--AGC 77 (276)
T ss_dssp SEEEEEETTTTEEEEEEECCTTC-----CCCEEEECTTSCEEEEC---------BSEEEEECT-TSCEEEEEECC--TTC
T ss_pred CEEEEEECCCCeEEEEeCCCccC-----CCcCeEECCCCCEEEeC---------CCCEEEECC-CCCEEEEEcCC--CCc
Confidence 478889997775 654332111 11223333477787732 236899999 543 654332 111
Q ss_pred eeeeeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCC-ceEec-C-CCccC--cCceeEEEECCEEEEEeCcccCCCCce
Q 018336 178 SFFAAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKD-EWTEL-A-RMTQE--RDECEAVVIGSEFWVVSGYKTERQGIF 251 (358)
Q Consensus 178 ~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~-~W~~~-~-~~p~~--~~~~~~~~~~~~lyv~gG~~~~~~~~~ 251 (358)
..+++.. .++.+++..... ...++.+|+... .|+.- . ..+.. .........+|.+++....
T Consensus 78 ~~~~~~~~~dG~~lv~~~~~-----~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~-------- 144 (276)
T 3no2_A 78 EMQTARILPDGNALVAWCGH-----PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFA-------- 144 (276)
T ss_dssp EEEEEEECTTSCEEEEEEST-----TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETT--------
T ss_pred cccccEECCCCCEEEEecCC-----CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecC--------
Confidence 2233333 366666654321 135778887433 24421 1 11111 1112233456777766532
Q ss_pred eeeeEEEECCCC-ceEEcCCccccCCCCCceeeeeecCccCceeccccceeeceEEEEeCCeEEEECCCCCCCCceEEEE
Q 018336 252 DESAESYQLGTG-EWKRAENAWKLSQCPRSNVGVGREGKLFCWAETEAAVQFGTCRVELGGCTLVTGSGYQGGPQEFYVV 330 (358)
Q Consensus 252 ~~~i~~yd~~~~-~W~~~~~~p~~~~~~~~~~~~~~d~~~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~~~~~~i~~y 330 (358)
...+.+||++-+ .|+.-... .+. ......++.++|.+... ..+..+
T Consensus 145 ~~~v~~~d~~G~~~w~~~~~~-----~~~------------------------~~~~~~~g~~~v~~~~~----~~v~~~ 191 (276)
T 3no2_A 145 TSEVREIAPNGQLLNSVKLSG-----TPF------------------------SSAFLDNGDCLVACGDA----HCFVQL 191 (276)
T ss_dssp TTEEEEECTTSCEEEEEECSS-----CCC------------------------EEEECTTSCEEEECBTT----SEEEEE
T ss_pred CCEEEEECCCCCEEEEEECCC-----Ccc------------------------ceeEcCCCCEEEEeCCC----CeEEEE
Confidence 236889999822 36643321 111 12234577888877653 469999
Q ss_pred ECCCCc--eEee
Q 018336 331 EGRNGK--FRKF 340 (358)
Q Consensus 331 d~~~~~--W~~~ 340 (358)
|+++++ |+.-
T Consensus 192 d~~tG~~~w~~~ 203 (276)
T 3no2_A 192 NLESNRIVRRVN 203 (276)
T ss_dssp CTTTCCEEEEEE
T ss_pred eCcCCcEEEEec
Confidence 999666 7764
No 41
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.57 E-value=0.26 Score=40.93 Aligned_cols=136 Identities=13% Similarity=-0.092 Sum_probs=69.9
Q ss_pred ceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEE-CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceee
Q 018336 102 YGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASS-QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFF 180 (358)
Q Consensus 102 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~ 180 (358)
..+..||+.+............ ...+++.. ++.+|+... ...+++||+.+.....+...... .-.
T Consensus 46 ~~i~~~~~~~~~~~~~~~~~~~-----~p~~i~~~~~g~l~v~~~--------~~~i~~~d~~~~~~~~~~~~~~~-~p~ 111 (270)
T 1rwi_B 46 GRVVKLATGSTGTTVLPFNGLY-----QPQGLAVDGAGTVYVTDF--------NNRVVTLAAGSNNQTVLPFDGLN-YPE 111 (270)
T ss_dssp CEEEEECC-----EECCCCSCC-----SCCCEEECTTCCEEEEET--------TTEEEEECTTCSCCEECCCCSCS-SEE
T ss_pred CcEEEecCCCcccceEeeCCcC-----CcceeEECCCCCEEEEcC--------CCEEEEEeCCCceEeeeecCCcC-CCc
Confidence 3678888877665544322111 11133333 567888764 13689999988765544321111 122
Q ss_pred eeEEE-CCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEEE-CCEEEEEeCcccCCCCceeeeeEEE
Q 018336 181 AAGEL-NGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVVI-GSEFWVVSGYKTERQGIFDESAESY 258 (358)
Q Consensus 181 ~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~-~~~lyv~gG~~~~~~~~~~~~i~~y 258 (358)
+++.. ++.+|+.... ...+.+|+..+.......... ......++.- +|++|+.... ...+.+|
T Consensus 112 ~i~~~~~g~l~v~~~~------~~~i~~~~~~~~~~~~~~~~~-~~~p~~i~~~~~g~l~v~~~~--------~~~i~~~ 176 (270)
T 1rwi_B 112 GLAVDTQGAVYVADRG------NNRVVKLAAGSKTQTVLPFTG-LNDPDGVAVDNSGNVYVTDTD--------NNRVVKL 176 (270)
T ss_dssp EEEECTTCCEEEEEGG------GTEEEEECTTCCSCEECCCCS-CCSCCCEEECTTCCEEEEEGG--------GTEEEEE
T ss_pred ceEECCCCCEEEEECC------CCEEEEEECCCceeEeecccc-CCCceeEEEeCCCCEEEEECC--------CCEEEEE
Confidence 33332 5778887432 246888887765544332111 1111223332 5788887643 2367889
Q ss_pred ECCCCceE
Q 018336 259 QLGTGEWK 266 (358)
Q Consensus 259 d~~~~~W~ 266 (358)
|+.+..-.
T Consensus 177 ~~~~~~~~ 184 (270)
T 1rwi_B 177 EAESNNQV 184 (270)
T ss_dssp CTTTCCEE
T ss_pred ecCCCceE
Confidence 98876543
No 42
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.57 E-value=0.038 Score=46.58 Aligned_cols=113 Identities=12% Similarity=-0.003 Sum_probs=73.3
Q ss_pred eeeEEEC-CEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEEECCEEEEEeCcccCCCCceeeeeEEE
Q 018336 180 FAAGELN-GRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVVIGSEFWVVSGYKTERQGIFDESAESY 258 (358)
Q Consensus 180 ~~~~~~~-~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~~~i~~y 258 (358)
++++... +.+|+..|... .+.+.++|+++++=..--+++......+++..+++||+..-. .+.+.+|
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~----~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~--------~~~v~vi 91 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYG----RSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWL--------KNIGFIY 91 (266)
T ss_dssp EEEEECSTTEEEEEECSTT----TCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETT--------CSEEEEE
T ss_pred ccEEEeCCCeEEEECCCCC----CCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEec--------CCEEEEE
Confidence 4555554 89999876422 267999999998765433444444445667778899999643 4568899
Q ss_pred ECCCCceEEcCCccccCCCCCceeeeeecCccCceeccccceeeceEEEEeCCeEEEECCCCCCCCceEEEEECCCCc
Q 018336 259 QLGTGEWKRAENAWKLSQCPRSNVGVGREGKLFCWAETEAAVQFGTCRVELGGCTLVTGSGYQGGPQEFYVVEGRNGK 336 (358)
Q Consensus 259 d~~~~~W~~~~~~p~~~~~~~~~~~~~~d~~~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~~~~~~i~~yd~~~~~ 336 (358)
|+.+.+ .+..++.. .+. +.+++.-++++|+..|. +.++++|+++.+
T Consensus 92 D~~t~~--v~~~i~~g--~~~-----------------------g~glt~Dg~~l~vs~gs-----~~l~viD~~t~~ 137 (266)
T 2iwa_A 92 DRRTLS--NIKNFTHQ--MKD-----------------------GWGLATDGKILYGSDGT-----SILYEIDPHTFK 137 (266)
T ss_dssp ETTTTE--EEEEEECC--SSS-----------------------CCEEEECSSSEEEECSS-----SEEEEECTTTCC
T ss_pred ECCCCc--EEEEEECC--CCC-----------------------eEEEEECCCEEEEECCC-----CeEEEEECCCCc
Confidence 998764 33333211 011 11235556789987653 689999999866
No 43
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=96.44 E-value=0.1 Score=46.13 Aligned_cols=134 Identities=13% Similarity=0.017 Sum_probs=72.2
Q ss_pred ceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEE--CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCcee
Q 018336 102 YGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASS--QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSF 179 (358)
Q Consensus 102 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~--~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~ 179 (358)
..+..+|..+++-......+.. -..++.. +..||+.+.. ...+.+||..+++........ ...
T Consensus 54 ~~i~v~d~~~~~~~~~~~~~~~------v~~~~~spdg~~l~~~~~~-------~~~v~v~d~~~~~~~~~~~~~--~~~ 118 (391)
T 1l0q_A 54 NDVSIIDTATNNVIATVPAGSS------PQGVAVSPDGKQVYVTNMA-------SSTLSVIDTTSNTVAGTVKTG--KSP 118 (391)
T ss_dssp TEEEEEETTTTEEEEEEECSSS------EEEEEECTTSSEEEEEETT-------TTEEEEEETTTTEEEEEEECS--SSE
T ss_pred CeEEEEECCCCeEEEEEECCCC------ccceEECCCCCEEEEEECC-------CCEEEEEECCCCeEEEEEeCC--CCc
Confidence 3688899988765443322221 1123332 3457776542 247999999988754432211 112
Q ss_pred eeeEEE--CCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEEE-CC-EEEEEeCcccCCCCceeeee
Q 018336 180 FAAGEL--NGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVVI-GS-EFWVVSGYKTERQGIFDESA 255 (358)
Q Consensus 180 ~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~-~~-~lyv~gG~~~~~~~~~~~~i 255 (358)
...+.. +..+|+.++.+ ..+.+||..+++....-.... ....++.. ++ .+|+.++. ...+
T Consensus 119 ~~~~~s~dg~~l~~~~~~~------~~v~~~d~~~~~~~~~~~~~~--~~~~~~~~~dg~~l~~~~~~--------~~~v 182 (391)
T 1l0q_A 119 LGLALSPDGKKLYVTNNGD------KTVSVINTVTKAVINTVSVGR--SPKGIAVTPDGTKVYVANFD--------SMSI 182 (391)
T ss_dssp EEEEECTTSSEEEEEETTT------TEEEEEETTTTEEEEEEECCS--SEEEEEECTTSSEEEEEETT--------TTEE
T ss_pred ceEEECCCCCEEEEEeCCC------CEEEEEECCCCcEEEEEecCC--CcceEEECCCCCEEEEEeCC--------CCEE
Confidence 233332 34577776432 469999998876654322211 11222222 34 46666543 2357
Q ss_pred EEEECCCCceE
Q 018336 256 ESYQLGTGEWK 266 (358)
Q Consensus 256 ~~yd~~~~~W~ 266 (358)
..||+.+++..
T Consensus 183 ~~~d~~~~~~~ 193 (391)
T 1l0q_A 183 SVIDTVTNSVI 193 (391)
T ss_dssp EEEETTTTEEE
T ss_pred EEEECCCCeEE
Confidence 88999887543
No 44
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.18 E-value=0.002 Score=61.23 Aligned_cols=36 Identities=14% Similarity=0.377 Sum_probs=29.2
Q ss_pred CCCCCCcHHHHHHHhccCC-cchhhhHHhhcHhHHHh
Q 018336 25 ELVPGLPEEISLECLTRLH-YSTHRVATRVSRRWRQL 60 (358)
Q Consensus 25 ~~~~~Lp~d~~~~il~rlp-~~~~~~~~~v~k~w~~l 60 (358)
..|+.||+|++.+||.+|| .++..+++.|||+|+.+
T Consensus 4 d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 4 RIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred cchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 3688999999999999999 99999999999999987
No 45
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.16 E-value=0.44 Score=39.42 Aligned_cols=133 Identities=11% Similarity=-0.051 Sum_probs=70.8
Q ss_pred eEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEE-CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeee
Q 018336 103 GVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASS-QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFA 181 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~ 181 (358)
.+..||+.......+..... .....++.. ++.+|+.... ...+++||..+............ .-.+
T Consensus 88 ~i~~~d~~~~~~~~~~~~~~-----~~p~~i~~~~~g~l~v~~~~-------~~~i~~~~~~~~~~~~~~~~~~~-~p~~ 154 (270)
T 1rwi_B 88 RVVTLAAGSNNQTVLPFDGL-----NYPEGLAVDTQGAVYVADRG-------NNRVVKLAAGSKTQTVLPFTGLN-DPDG 154 (270)
T ss_dssp EEEEECTTCSCCEECCCCSC-----SSEEEEEECTTCCEEEEEGG-------GTEEEEECTTCCSCEECCCCSCC-SCCC
T ss_pred EEEEEeCCCceEeeeecCCc-----CCCcceEECCCCCEEEEECC-------CCEEEEEECCCceeEeeccccCC-Ccee
Confidence 67889988766544432111 112234333 5778887542 24688888776554433211111 1122
Q ss_pred eEEE-CCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEEE--CCEEEEEeCcccCCCCceeeeeEEE
Q 018336 182 AGEL-NGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVVI--GSEFWVVSGYKTERQGIFDESAESY 258 (358)
Q Consensus 182 ~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~~~i~~y 258 (358)
.+.. ++.+|+.... ...+.+||+.+..-....... ......+.+ +|.+|+.... ...+.+|
T Consensus 155 i~~~~~g~l~v~~~~------~~~i~~~~~~~~~~~~~~~~~--~~~p~~i~~d~~g~l~v~~~~--------~~~v~~~ 218 (270)
T 1rwi_B 155 VAVDNSGNVYVTDTD------NNRVVKLEAESNNQVVLPFTD--ITAPWGIAVDEAGTVYVTEHN--------TNQVVKL 218 (270)
T ss_dssp EEECTTCCEEEEEGG------GTEEEEECTTTCCEEECCCSS--CCSEEEEEECTTCCEEEEETT--------TSCEEEE
T ss_pred EEEeCCCCEEEEECC------CCEEEEEecCCCceEeecccC--CCCceEEEECCCCCEEEEECC--------CCcEEEE
Confidence 3332 5778887532 246899999876544332111 122223333 4578887642 2357889
Q ss_pred ECCCCc
Q 018336 259 QLGTGE 264 (358)
Q Consensus 259 d~~~~~ 264 (358)
|+....
T Consensus 219 ~~~~~~ 224 (270)
T 1rwi_B 219 LAGSTT 224 (270)
T ss_dssp CTTCSC
T ss_pred cCCCCc
Confidence 887654
No 46
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.12 E-value=0.51 Score=39.59 Aligned_cols=136 Identities=7% Similarity=-0.009 Sum_probs=72.8
Q ss_pred eEEEEeCCCCCeeecCCCCCCCCCCCceeEEEE-ECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCC-Cceee
Q 018336 103 GVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVAS-SQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPD-NRSFF 180 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~-~~~~~ 180 (358)
.+..||+. ++......... . .....++. .++.+|+.... ...+++||+. .+.+.+. ++. ...-.
T Consensus 37 ~v~~~d~~-~~~~~~~~~~~-~---~~~~~i~~~~~g~l~v~~~~-------~~~i~~~~~~-g~~~~~~-~~~~~~~~~ 102 (299)
T 2z2n_A 37 MISCINLD-GKITEYPLPTP-D---AKVMCLTISSDGEVWFTENA-------ANKIGRITKK-GIIKEYT-LPNPDSAPY 102 (299)
T ss_dssp EEEEECTT-CCEEEEECSST-T---CCEEEEEECTTSCEEEEETT-------TTEEEEECTT-SCEEEEE-CSSTTCCEE
T ss_pred cEEEEcCC-CCeEEecCCcc-c---CceeeEEECCCCCEEEeCCC-------CCeEEEECCC-CcEEEEe-CCCcCCCce
Confidence 68889998 77765532111 1 11223333 36778887542 2368999986 4554432 121 11222
Q ss_pred eeEEE-CCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEEE-CCEEEEEeCcccCCCCceeeeeEEE
Q 018336 181 AAGEL-NGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVVI-GSEFWVVSGYKTERQGIFDESAESY 258 (358)
Q Consensus 181 ~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~-~~~lyv~gG~~~~~~~~~~~~i~~y 258 (358)
+++.. ++.+|+.... ...+.+||+ +++...............++.- +|++|+.... ...+.+|
T Consensus 103 ~i~~~~~g~l~v~~~~------~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~--------~~~i~~~ 167 (299)
T 2z2n_A 103 GITEGPNGDIWFTEMN------GNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQ--------NNAIGRI 167 (299)
T ss_dssp EEEECTTSCEEEEETT------TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETT--------TTEEEEE
T ss_pred eeEECCCCCEEEEecC------CceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCC--------CCEEEEE
Confidence 33332 5788887432 246889998 6666544311111111223322 5678887521 2357889
Q ss_pred ECCCCceEEc
Q 018336 259 QLGTGEWKRA 268 (358)
Q Consensus 259 d~~~~~W~~~ 268 (358)
|+ +++...+
T Consensus 168 ~~-~g~~~~~ 176 (299)
T 2z2n_A 168 TE-SGDITEF 176 (299)
T ss_dssp CT-TCCEEEE
T ss_pred cC-CCcEEEe
Confidence 99 7776654
No 47
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=96.05 E-value=0.54 Score=39.39 Aligned_cols=145 Identities=11% Similarity=0.099 Sum_probs=73.2
Q ss_pred ceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEE--ECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCcee
Q 018336 102 YGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVAS--SQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSF 179 (358)
Q Consensus 102 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~--~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~ 179 (358)
..+..||+....-..+...............++. .++.+|+.+... ...+.+||+....-..+...... .-
T Consensus 51 ~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~------~~~i~~~d~~g~~~~~~~~~~~~-~~ 123 (286)
T 1q7f_A 51 HRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSP------THQIQIYNQYGQFVRKFGATILQ-HP 123 (286)
T ss_dssp TEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGG------GCEEEEECTTSCEEEEECTTTCS-CE
T ss_pred CEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCC------CCEEEEECCCCcEEEEecCccCC-Cc
Confidence 3678888875433333321111100011234444 368899886421 24789999654443334321111 11
Q ss_pred eeeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEEE--CCEEEEEeCcccCCCCceeeeeE
Q 018336 180 FAAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVVI--GSEFWVVSGYKTERQGIFDESAE 256 (358)
Q Consensus 180 ~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~~~i~ 256 (358)
.+++. -++.+|+.... ...+.+||+.......+... ........+.+ +|++|+.... ...|.
T Consensus 124 ~~i~~~~~g~l~v~~~~------~~~i~~~~~~g~~~~~~~~~-~~~~~p~~i~~~~~g~l~v~~~~--------~~~i~ 188 (286)
T 1q7f_A 124 RGVTVDNKGRIIVVECK------VMRVIIFDQNGNVLHKFGCS-KHLEFPNGVVVNDKQEIFISDNR--------AHCVK 188 (286)
T ss_dssp EEEEECTTSCEEEEETT------TTEEEEECTTSCEEEEEECT-TTCSSEEEEEECSSSEEEEEEGG--------GTEEE
T ss_pred eEEEEeCCCCEEEEECC------CCEEEEEcCCCCEEEEeCCC-CccCCcEEEEECCCCCEEEEECC--------CCEEE
Confidence 23333 35778887532 24689999866544444211 11112223333 5788887643 34678
Q ss_pred EEECCCCceEEc
Q 018336 257 SYQLGTGEWKRA 268 (358)
Q Consensus 257 ~yd~~~~~W~~~ 268 (358)
+||+.......+
T Consensus 189 ~~~~~g~~~~~~ 200 (286)
T 1q7f_A 189 VFNYEGQYLRQI 200 (286)
T ss_dssp EEETTCCEEEEE
T ss_pred EEcCCCCEEEEE
Confidence 899866543433
No 48
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=95.91 E-value=0.76 Score=45.21 Aligned_cols=180 Identities=13% Similarity=0.097 Sum_probs=98.4
Q ss_pred ceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEE-CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCC----CCC
Q 018336 102 YGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASS-QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNM----PDN 176 (358)
Q Consensus 102 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~----~~~ 176 (358)
..+..||+.++++..+......... ..-.+++.. ++.|++... ..+++||+.+++|+..... ..+
T Consensus 427 ~Gl~~~d~~~~~~~~~~~~~~~l~~-~~v~~i~~d~~g~lwigt~---------~Gl~~~~~~~~~~~~~~~~~~~~~~~ 496 (795)
T 4a2l_A 427 GGLSILHRNSGQVENFNQRNSQLVN-ENVYAILPDGEGNLWLGTL---------SALVRFNPEQRSFTTIEKEKDGTPVV 496 (795)
T ss_dssp TEEEEEETTTCCEEEECTTTSCCSC-SCEEEEEECSSSCEEEEES---------SCEEEEETTTTEEEECCBCTTCCBCC
T ss_pred CceeEEeCCCCcEEEeecCCCCcCC-CeeEEEEECCCCCEEEEec---------CceeEEeCCCCeEEEccccccccccC
Confidence 3577889888887776532111100 111122222 466776542 2589999999999887532 111
Q ss_pred cee-eeeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCC---c-cCcCceeEEEE--CCEEEEEeCcccCCC
Q 018336 177 RSF-FAAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARM---T-QERDECEAVVI--GSEFWVVSGYKTERQ 248 (358)
Q Consensus 177 ~~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~---p-~~~~~~~~~~~--~~~lyv~gG~~~~~~ 248 (358)
... .+... -++.|++... .-+.+||+.++.+ .+... + .+-.....+.. +|.|++-..
T Consensus 497 ~~~i~~i~~d~~g~lWigt~--------~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~------ 561 (795)
T 4a2l_A 497 SKQITTLFRDSHKRLWIGGE--------EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR------ 561 (795)
T ss_dssp CCCEEEEEECTTCCEEEEES--------SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES------
T ss_pred CceEEEEEECCCCCEEEEeC--------CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC------
Confidence 111 12222 2466776532 2388999988888 43311 1 11111122222 566776542
Q ss_pred CceeeeeEEEECCCCceEEcCCccccCCCCCceeeeeecCccCceeccccceeeceEEE-EeCCeEEEECCCCCCCCceE
Q 018336 249 GIFDESAESYQLGTGEWKRAENAWKLSQCPRSNVGVGREGKLFCWAETEAAVQFGTCRV-ELGGCTLVTGSGYQGGPQEF 327 (358)
Q Consensus 249 ~~~~~~i~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~d~~~~~W~~lp~~~r~~~~~~-~~~~~i~v~gG~~~~~~~~i 327 (358)
..+.+||+.++++....... + .+-.. ..+++ ..+|+|++.+. +.+
T Consensus 562 ----~Gl~~~d~~~~~~~~~~~~~--g-l~~~~---------------------i~~i~~d~~g~lWi~t~------~Gl 607 (795)
T 4a2l_A 562 ----EGFYCFNEKDKQIKRYNTTN--G-LPNNV---------------------VYGILEDSFGRLWLSTN------RGI 607 (795)
T ss_dssp ----SCEEEEETTTTEEEEECGGG--T-CSCSC---------------------EEEEEECTTSCEEEEET------TEE
T ss_pred ----CCceeECCCCCcEEEeCCCC--C-Cchhh---------------------eEEEEECCCCCEEEEcC------Cce
Confidence 24678999999888765321 0 00000 01122 23577877664 589
Q ss_pred EEEECCCCceEee
Q 018336 328 YVVEGRNGKFRKF 340 (358)
Q Consensus 328 ~~yd~~~~~W~~~ 340 (358)
.+||+++++++..
T Consensus 608 ~~~~~~~~~~~~~ 620 (795)
T 4a2l_A 608 SCFNPETEKFRNF 620 (795)
T ss_dssp EEEETTTTEEEEE
T ss_pred EEEcCCCCcEEEc
Confidence 9999999988876
No 49
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=95.85 E-value=0.55 Score=46.10 Aligned_cols=180 Identities=8% Similarity=0.050 Sum_probs=100.2
Q ss_pred ceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEE-CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCC-----C
Q 018336 102 YGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASS-QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMP-----D 175 (358)
Q Consensus 102 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~-----~ 175 (358)
..+..||+.++++........+. ..-.+++.. ++.|++... .-+++||+.+++|+.....+ .
T Consensus 427 ~Gl~~~~~~~~~~~~~~~~~~~~---~~v~~i~~d~~g~lwigt~---------~Gl~~~~~~~~~~~~~~~~~~~~~~~ 494 (781)
T 3v9f_A 427 GNISYYNTRLKKFQIIELEKNEL---LDVRVFYEDKNKKIWIGTH---------AGVFVIDLASKKVIHHYDTSNSQLLE 494 (781)
T ss_dssp EEEEEECSSSCEEEECCSTTTCC---CCEEEEEECTTSEEEEEET---------TEEEEEESSSSSCCEEECTTTSSCSC
T ss_pred CCEEEEcCCCCcEEEeccCCCCC---CeEEEEEECCCCCEEEEEC---------CceEEEeCCCCeEEecccCccccccc
Confidence 46788999888887775321111 111223333 567777532 36899999998887654322 1
Q ss_pred CceeeeeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCcc-CcCceeEEEE--CCEEEEEeCcccCCCCce
Q 018336 176 NRSFFAAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQ-ERDECEAVVI--GSEFWVVSGYKTERQGIF 251 (358)
Q Consensus 176 ~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~-~~~~~~~~~~--~~~lyv~gG~~~~~~~~~ 251 (358)
... .+.+. -++.|++.. .. .-+.+||+.+++++.+..... +-.....+.. +|.|++-..
T Consensus 495 ~~i-~~i~~d~~g~lWigt-~~------~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~--------- 557 (781)
T 3v9f_A 495 NFV-RSIAQDSEGRFWIGT-FG------GGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG--------- 557 (781)
T ss_dssp SCE-EEEEECTTCCEEEEE-SS------SCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET---------
T ss_pred cee-EEEEEcCCCCEEEEE-cC------CCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC---------
Confidence 111 12222 246676642 21 238889999998887653111 1111112222 566777542
Q ss_pred eeee-EEEECCCCceEEcCCccccCCCCCceeeeeecCccCceeccccceeeceEEEEeCCeEEEECCCCCCCCceEEEE
Q 018336 252 DESA-ESYQLGTGEWKRAENAWKLSQCPRSNVGVGREGKLFCWAETEAAVQFGTCRVELGGCTLVTGSGYQGGPQEFYVV 330 (358)
Q Consensus 252 ~~~i-~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~d~~~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~~~~~~i~~y 330 (358)
..+ .+||+.++++........ . .... ....+...+|+|++.+. +.+.+|
T Consensus 558 -~Glv~~~d~~~~~~~~~~~~~g-l-~~~~---------------------i~~i~~d~~g~lW~~t~------~Gl~~~ 607 (781)
T 3v9f_A 558 -EGLVCFPSARNFDYQVFQRKEG-L-PNTH---------------------IRAISEDKNGNIWASTN------TGISCY 607 (781)
T ss_dssp -TEEEEESCTTTCCCEEECGGGT-C-SCCC---------------------CCEEEECSSSCEEEECS------SCEEEE
T ss_pred -CCceEEECCCCCcEEEccccCC-C-CCce---------------------EEEEEECCCCCEEEEcC------CceEEE
Confidence 234 789999988877653210 0 0000 11112334678887764 479999
Q ss_pred ECCCCceEee
Q 018336 331 EGRNGKFRKF 340 (358)
Q Consensus 331 d~~~~~W~~~ 340 (358)
|+.+++++..
T Consensus 608 ~~~~~~~~~~ 617 (781)
T 3v9f_A 608 ITSKKCFYTY 617 (781)
T ss_dssp ETTTTEEEEE
T ss_pred ECCCCceEEe
Confidence 9999988776
No 50
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=95.82 E-value=0.25 Score=43.10 Aligned_cols=135 Identities=14% Similarity=0.158 Sum_probs=68.7
Q ss_pred eEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEE-C--CEEEEEcCcCCCCCCCcceeEEEECCCCcEEe---CCCCCCC
Q 018336 103 GVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASS-Q--GKLVVMGGWDPASYSPVSHVFVYDFTTRRWTR---GKNMPDN 176 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~--~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~---~~~~~~~ 176 (358)
.+..||..+++|..+..+..... . -.+++.. + +.+++.|+.+ ..+.+||..+..-.. +.....+
T Consensus 80 ~v~iwd~~~~~~~~~~~~~~~~~--~-v~~~~~~~~~~~~~l~~~~~d-------~~i~v~d~~~~~~~~~~~~~~~~~~ 149 (379)
T 3jrp_A 80 KVLIWKEENGRWSQIAVHAVHSA--S-VNSVQWAPHEYGPLLLVASSD-------GKVSVVEFKENGTTSPIIIDAHAIG 149 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCCSS--C-EEEEEECCGGGCSEEEEEETT-------SEEEEEECCTTSCCCEEEEECCTTC
T ss_pred EEEEEEcCCCceeEeeeecCCCc--c-eEEEEeCCCCCCCEEEEecCC-------CcEEEEecCCCCceeeEEecCCCCc
Confidence 57888988888766544433211 1 1122222 3 5566666542 368889987763211 1111111
Q ss_pred ceeeeeEEE--------------CCEEEEEcCcCCCCCCCCeEEEEECCCCc--eEecCCCccCcCceeEEEE--C---C
Q 018336 177 RSFFAAGEL--------------NGRVIIAGGHDENKTALSSAWAYDLIKDE--WTELARMTQERDECEAVVI--G---S 235 (358)
Q Consensus 177 ~~~~~~~~~--------------~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~p~~~~~~~~~~~--~---~ 235 (358)
. .+.+.. ++..++.|+.+. .+.+||..++. +.....+.........+.+ + +
T Consensus 150 v--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg------~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~ 221 (379)
T 3jrp_A 150 V--NSASWAPATIEEDGEHNGTKESRKFVTGGADN------LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLR 221 (379)
T ss_dssp E--EEEEECCCC----------CTTCEEEEEETTS------CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSS
T ss_pred e--EEEEEcCccccccccccCCCCCCEEEEEeCCC------eEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCC
Confidence 1 111111 466777776543 48888876543 4444333322222222322 3 6
Q ss_pred EEEEEeCcccCCCCceeeeeEEEECCCC
Q 018336 236 EFWVVSGYKTERQGIFDESAESYQLGTG 263 (358)
Q Consensus 236 ~lyv~gG~~~~~~~~~~~~i~~yd~~~~ 263 (358)
++++.|+.+ ..+..||..+.
T Consensus 222 ~~l~s~~~d--------g~i~iwd~~~~ 241 (379)
T 3jrp_A 222 SYLASVSQD--------RTCIIWTQDNE 241 (379)
T ss_dssp EEEEEEETT--------SCEEEEEESST
T ss_pred CeEEEEeCC--------CEEEEEeCCCC
Confidence 777777653 24677888765
No 51
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=95.79 E-value=0.42 Score=40.93 Aligned_cols=97 Identities=8% Similarity=0.016 Sum_probs=52.9
Q ss_pred ceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEE-EC-CEEEEEcCcCCCCCCCcceeEEEECCCCcE--EeCCCCCCCc
Q 018336 102 YGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVAS-SQ-GKLVVMGGWDPASYSPVSHVFVYDFTTRRW--TRGKNMPDNR 177 (358)
Q Consensus 102 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~-~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W--~~~~~~~~~~ 177 (358)
..+..||+.+++.......+.. .. .++. -+ ..+|+.+.. ...++++|+.+.+. ..+.....+.
T Consensus 20 ~~v~~~d~~~~~~~~~~~~~~~-----~~-~~~~s~dg~~l~~~~~~-------~~~i~~~d~~~~~~~~~~~~~~~~~~ 86 (331)
T 3u4y_A 20 RRISFFSTDTLEILNQITLGYD-----FV-DTAITSDCSNVVVTSDF-------CQTLVQIETQLEPPKVVAIQEGQSSM 86 (331)
T ss_dssp TEEEEEETTTCCEEEEEECCCC-----EE-EEEECSSSCEEEEEEST-------TCEEEEEECSSSSCEEEEEEECSSCC
T ss_pred CeEEEEeCcccceeeeEEccCC-----cc-eEEEcCCCCEEEEEeCC-------CCeEEEEECCCCceeEEecccCCCCc
Confidence 4789999999987655443321 11 2322 23 457777652 24799999988774 2222211121
Q ss_pred eeeeeEEE--CCEEEEEcCcCCCCCCCCeEEEEECCCCceEe
Q 018336 178 SFFAAGEL--NGRVIIAGGHDENKTALSSAWAYDLIKDEWTE 217 (358)
Q Consensus 178 ~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~ 217 (358)
++.+.. +..+| ++.... ....+.+||..+++-..
T Consensus 87 --~~~~~s~dg~~l~-~~~~~~---~~~~i~v~d~~~~~~~~ 122 (331)
T 3u4y_A 87 --ADVDITPDDQFAV-TVTGLN---HPFNMQSYSFLKNKFIS 122 (331)
T ss_dssp --CCEEECTTSSEEE-ECCCSS---SSCEEEEEETTTTEEEE
T ss_pred --cceEECCCCCEEE-EecCCC---CcccEEEEECCCCCeEE
Confidence 212222 34566 432111 12379999998876544
No 52
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=95.71 E-value=0.26 Score=42.01 Aligned_cols=186 Identities=13% Similarity=0.134 Sum_probs=92.7
Q ss_pred ceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEE-CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCC--Cce
Q 018336 102 YGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASS-QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPD--NRS 178 (358)
Q Consensus 102 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~--~~~ 178 (358)
..++.||+.++.-..... +. . -.+++.. ++.+++..+ ..+++||+.+++++.+..... +..
T Consensus 35 ~~i~~~d~~~~~~~~~~~-~~-----~-~~~i~~~~dG~l~v~~~---------~~l~~~d~~~g~~~~~~~~~~~~~~~ 98 (297)
T 3g4e_A 35 KKVCRWDSFTKQVQRVTM-DA-----P-VSSVALRQSGGYVATIG---------TKFCALNWKEQSAVVLATVDNDKKNN 98 (297)
T ss_dssp TEEEEEETTTCCEEEEEC-SS-----C-EEEEEEBTTSSEEEEET---------TEEEEEETTTTEEEEEEECCTTCSSE
T ss_pred CEEEEEECCCCcEEEEeC-CC-----c-eEEEEECCCCCEEEEEC---------CeEEEEECCCCcEEEEEecCCCCCCC
Confidence 468899999876544321 22 1 1133333 566666532 379999999998877643321 222
Q ss_pred eeeeEE--ECCEEEEEcCcCCC-----CCCCCeEEEEECCCCceEecCCCccCcCceeEEEE--CC-EEEEEeCcccCCC
Q 018336 179 FFAAGE--LNGRVIIAGGHDEN-----KTALSSAWAYDLIKDEWTELARMTQERDECEAVVI--GS-EFWVVSGYKTERQ 248 (358)
Q Consensus 179 ~~~~~~--~~~~iyv~GG~~~~-----~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~~-~lyv~gG~~~~~~ 248 (358)
...... -++.+|+..-.... ......++.+++.. +...+.. .........+ ++ .+|+....
T Consensus 99 ~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~---~~~~pngi~~spdg~~lyv~~~~----- 169 (297)
T 3g4e_A 99 RFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFD---QVDISNGLDWSLDHKIFYYIDSL----- 169 (297)
T ss_dssp EEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEE---EESBEEEEEECTTSCEEEEEEGG-----
T ss_pred CCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEee---ccccccceEEcCCCCEEEEecCC-----
Confidence 222222 35777764311110 01234688888753 3333211 1111122332 44 48887643
Q ss_pred CceeeeeEEEEC--CCCceEEcC---CccccCCCCCceeeeeecCccCceeccccceeeceEEEEeCCeEEEECCCCCCC
Q 018336 249 GIFDESAESYQL--GTGEWKRAE---NAWKLSQCPRSNVGVGREGKLFCWAETEAAVQFGTCRVELGGCTLVTGSGYQGG 323 (358)
Q Consensus 249 ~~~~~~i~~yd~--~~~~W~~~~---~~p~~~~~~~~~~~~~~d~~~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~~~ 323 (358)
...|++||. .++...... .++... . .-...++..+|+||+.....
T Consensus 170 ---~~~i~~~~~d~~~G~~~~~~~~~~~~~~~----~--------------------~p~g~~~d~~G~lwva~~~~--- 219 (297)
T 3g4e_A 170 ---SYSVDAFDYDLQTGQISNRRSVYKLEKEE----Q--------------------IPDGMCIDAEGKLWVACYNG--- 219 (297)
T ss_dssp ---GTEEEEEEECTTTCCEEEEEEEEECCGGG----C--------------------EEEEEEEBTTSCEEEEEETT---
T ss_pred ---CCcEEEEeccCCCCcccCcEEEEECCCCC----C--------------------CCCeeEECCCCCEEEEEcCC---
Confidence 235677775 555543211 111000 0 00111233467888875322
Q ss_pred CceEEEEECCCCceEee-cCC
Q 018336 324 PQEFYVVEGRNGKFRKF-DVP 343 (358)
Q Consensus 324 ~~~i~~yd~~~~~W~~~-~~p 343 (358)
..|.+||+++++.... .+|
T Consensus 220 -~~v~~~d~~tG~~~~~i~~p 239 (297)
T 3g4e_A 220 -GRVIRLDPVTGKRLQTVKLP 239 (297)
T ss_dssp -TEEEEECTTTCCEEEEEECS
T ss_pred -CEEEEEcCCCceEEEEEECC
Confidence 4799999997765443 666
No 53
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=95.61 E-value=0.34 Score=43.34 Aligned_cols=96 Identities=15% Similarity=0.100 Sum_probs=57.8
Q ss_pred eeEEEECCCCcEEeCCCCCCCceeeeeEEE-CCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCcc---CcCceeEE
Q 018336 156 HVFVYDFTTRRWTRGKNMPDNRSFFAAGEL-NGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQ---ERDECEAV 231 (358)
Q Consensus 156 ~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~---~~~~~~~~ 231 (358)
.++++|+.+.+++.+..++......+++.. ++.+++.++.+ ..+.+||+.+++......... .......+
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~------~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~ 175 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTGFQPKSVRFIDNTRLAIPLLED------EGMDVLDINSGQTVRLSPPEKYKKKLGFVETI 175 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECSSCBCCCEESSSSEEEEEBTTS------SSEEEEETTTCCEEEECCCHHHHTTCCEEEEE
T ss_pred EEEEECCCCCcceEEEEEcCCCCceEEEEeCCCeEEEEeCCC------CeEEEEECCCCeEeeecCcccccccCCceeEE
Confidence 789999987766665443333222223322 67888887543 349999999887765433221 11122223
Q ss_pred EE--CCEEEEEeCcccCCCCceeeeeEEEECCCCce
Q 018336 232 VI--GSEFWVVSGYKTERQGIFDESAESYQLGTGEW 265 (358)
Q Consensus 232 ~~--~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W 265 (358)
.+ ++++|+.++.. ..+.+||+.+++-
T Consensus 176 ~~~~~~~~~~s~~~d--------~~v~~~d~~~~~~ 203 (433)
T 3bws_A 176 SIPEHNELWVSQMQA--------NAVHVFDLKTLAY 203 (433)
T ss_dssp EEGGGTEEEEEEGGG--------TEEEEEETTTCCE
T ss_pred EEcCCCEEEEEECCC--------CEEEEEECCCceE
Confidence 33 77888887642 3678899987653
No 54
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=95.59 E-value=0.81 Score=37.91 Aligned_cols=190 Identities=9% Similarity=-0.064 Sum_probs=94.3
Q ss_pred eEEEEeCCC-CCeeecCCCCCCCCCCCceeEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeee
Q 018336 103 GVTVFDPVS-LTWDRLGPVPEYPAGLPLFCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFA 181 (358)
Q Consensus 103 ~~~~~d~~~-~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~ 181 (358)
.+..+|..+ ++...+....... ........-++..+++++.... ....+|.+|..+...+.+..... ...
T Consensus 63 ~i~~~d~~~~~~~~~~~~~~~~~---~~~~~~~spdg~~l~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~---~~~ 133 (297)
T 2ojh_A 63 LLYRLSLAGDPSPEKVDTGFATI---CNNDHGISPDGALYAISDKVEF---GKSAIYLLPSTGGTPRLMTKNLP---SYW 133 (297)
T ss_dssp EEEEEESSSCCSCEECCCTTCCC---BCSCCEECTTSSEEEEEECTTT---SSCEEEEEETTCCCCEECCSSSS---EEE
T ss_pred eEEEEeCCCCCCceEeccccccc---cccceEECCCCCEEEEEEeCCC---CcceEEEEECCCCceEEeecCCC---ccc
Confidence 688899988 7766654332111 1111222234544444442211 14589999988877655543322 122
Q ss_pred eEEE-CC-EEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEE-EECCE-EEEEeCcccCCCCceeeeeEE
Q 018336 182 AGEL-NG-RVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAV-VIGSE-FWVVSGYKTERQGIFDESAES 257 (358)
Q Consensus 182 ~~~~-~~-~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~-~~~~~-lyv~gG~~~~~~~~~~~~i~~ 257 (358)
.+.. ++ .+++.++.+. ...++.++..++....+...+... .... .-+++ |++.+.... ...++.
T Consensus 134 ~~~spdg~~l~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~s~dg~~l~~~~~~~~------~~~i~~ 201 (297)
T 2ojh_A 134 HGWSPDGKSFTYCGIRDQ----VFDIYSMDIDSGVETRLTHGEGRN--DGPDYSPDGRWIYFNSSRTG------QMQIWR 201 (297)
T ss_dssp EEECTTSSEEEEEEEETT----EEEEEEEETTTCCEEECCCSSSCE--EEEEECTTSSEEEEEECTTS------SCEEEE
T ss_pred eEECCCCCEEEEEECCCC----ceEEEEEECCCCcceEcccCCCcc--ccceECCCCCEEEEEecCCC------CccEEE
Confidence 2222 33 4555544322 135777778777776655433211 1122 22555 444443221 335677
Q ss_pred EECCCCceEEcCCccccCCCCCceeeeeecCccCceeccccceeeceEEEEeCCeEEEECCCCCC-------CCceEEEE
Q 018336 258 YQLGTGEWKRAENAWKLSQCPRSNVGVGREGKLFCWAETEAAVQFGTCRVELGGCTLVTGSGYQG-------GPQEFYVV 330 (358)
Q Consensus 258 yd~~~~~W~~~~~~p~~~~~~~~~~~~~~d~~~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~~-------~~~~i~~y 330 (358)
++...+....+..... . ........+++.+++++.... ....++++
T Consensus 202 ~~~~~~~~~~~~~~~~-------~--------------------~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~ 254 (297)
T 2ojh_A 202 VRVDGSSVERITDSAY-------G--------------------DWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLM 254 (297)
T ss_dssp EETTSSCEEECCCCSE-------E--------------------EEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEE
T ss_pred ECCCCCCcEEEecCCc-------c--------------------cCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEE
Confidence 7777766655543210 0 001122335555555443211 11579999
Q ss_pred ECCCCceEee
Q 018336 331 EGRNGKFRKF 340 (358)
Q Consensus 331 d~~~~~W~~~ 340 (358)
|..+++...+
T Consensus 255 d~~~~~~~~~ 264 (297)
T 2ojh_A 255 DMDGGNVETL 264 (297)
T ss_dssp ETTSCSCEEE
T ss_pred ecCCCCceee
Confidence 9998877666
No 55
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=95.58 E-value=1.2 Score=39.96 Aligned_cols=105 Identities=17% Similarity=0.282 Sum_probs=56.2
Q ss_pred EECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEEECCEEEEEcCcCCCCCCCCeEEEEECCCCc
Q 018336 135 SSQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGELNGRVIIAGGHDENKTALSSAWAYDLIKDE 214 (358)
Q Consensus 135 ~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~ 214 (358)
..++..++.|+.+ ..+.+||..+.+-... +............++..++.|+.+ ..+.+||..++.
T Consensus 246 ~~~~~~l~~~~~d-------g~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~d------~~i~i~d~~~~~ 310 (445)
T 2ovr_B 246 QYDGRRVVSGAYD-------FMVKVWDPETETCLHT--LQGHTNRVYSLQFDGIHVVSGSLD------TSIRVWDVETGN 310 (445)
T ss_dssp EECSSCEEEEETT-------SCEEEEEGGGTEEEEE--ECCCSSCEEEEEECSSEEEEEETT------SCEEEEETTTCC
T ss_pred EECCCEEEEEcCC-------CEEEEEECCCCcEeEE--ecCCCCceEEEEECCCEEEEEeCC------CeEEEEECCCCC
Confidence 3366666666543 3688899877653221 111111122223366666776654 348999998765
Q ss_pred eEecCCCccCcCceeEEEECCEEEEEeCcccCCCCceeeeeEEEECCCCc
Q 018336 215 WTELARMTQERDECEAVVIGSEFWVVSGYKTERQGIFDESAESYQLGTGE 264 (358)
Q Consensus 215 W~~~~~~p~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~ 264 (358)
-... +.........+..++.+++.|+.+ ..+..||..+++
T Consensus 311 ~~~~--~~~~~~~v~~~~~~~~~l~~~~~d--------g~i~vwd~~~~~ 350 (445)
T 2ovr_B 311 CIHT--LTGHQSLTSGMELKDNILVSGNAD--------STVKIWDIKTGQ 350 (445)
T ss_dssp EEEE--ECCCCSCEEEEEEETTEEEEEETT--------SCEEEEETTTCC
T ss_pred EEEE--EcCCcccEEEEEEeCCEEEEEeCC--------CeEEEEECCCCc
Confidence 3321 111122223344566666666543 356788887664
No 56
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=95.58 E-value=1.6 Score=42.08 Aligned_cols=119 Identities=17% Similarity=0.157 Sum_probs=72.9
Q ss_pred EEEECCEEEEEcCcCCCCCCCcceeEEEECCCCc--EEeCCCCCCC--------ceeeeeEEECCEEEEEcCcCCCCCCC
Q 018336 133 VASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRR--WTRGKNMPDN--------RSFFAAGELNGRVIIAGGHDENKTAL 202 (358)
Q Consensus 133 ~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~--------~~~~~~~~~~~~iyv~GG~~~~~~~~ 202 (358)
.++.++.||+... ...++.+|..|.+ |+.-...+.. ....+.++.++.||+... -
T Consensus 73 P~v~~g~vyv~~~--------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~-------d 137 (677)
T 1kb0_A 73 PVVVDGIMYVSAS--------WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW-------D 137 (677)
T ss_dssp CEEETTEEEEECG--------GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT-------T
T ss_pred CEEECCEEEEECC--------CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC-------C
Confidence 3457999999865 3478999988764 8765432211 112345567889988732 2
Q ss_pred CeEEEEECCCCc--eEecCC--Ccc-CcCceeEEEECCEEEEEeCcccCCCCceeeeeEEEECCCCc--eEEcC
Q 018336 203 SSAWAYDLIKDE--WTELAR--MTQ-ERDECEAVVIGSEFWVVSGYKTERQGIFDESAESYQLGTGE--WKRAE 269 (358)
Q Consensus 203 ~~~~~yd~~t~~--W~~~~~--~p~-~~~~~~~~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~--W~~~~ 269 (358)
..++++|..+++ |+.-.. .+. .......++.++.+|+..+.... .....+.+||..+++ |+.-.
T Consensus 138 g~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~---~~~g~v~a~D~~tG~~~W~~~~ 208 (677)
T 1kb0_A 138 GRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEY---GVRGYITAYDAETGERKWRWFS 208 (677)
T ss_dssp SEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTT---CCBCEEEEEETTTCCEEEEEES
T ss_pred CEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEeccccc---CCCCEEEEEECCCCcEEEEecc
Confidence 469999998764 875432 111 11222345678888876532211 124578999999875 87644
No 57
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=95.57 E-value=0.87 Score=38.10 Aligned_cols=137 Identities=9% Similarity=0.036 Sum_probs=73.6
Q ss_pred ceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEE-ECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceee
Q 018336 102 YGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVAS-SQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFF 180 (358)
Q Consensus 102 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~ 180 (358)
..+..||+. ++...+.. +... .....++. .++.+|+.... ...+.+||+. .++...........-.
T Consensus 41 ~~v~~~~~~-~~~~~~~~-~~~~---~~~~~i~~~~~g~l~v~~~~-------~~~v~~~d~~-g~~~~~~~~~~~~~~~ 107 (300)
T 2qc5_A 41 NKISSLDQS-GRIKEFEV-PTPD---AKVMCLIVSSLGDIWFTENG-------ANKIGKLSKK-GGFTEYPLPQPDSGPY 107 (300)
T ss_dssp TEEEEECTT-SCEEEEEC-SSTT---CCEEEEEECTTSCEEEEETT-------TTEEEEECTT-SCEEEEECSSTTCCEE
T ss_pred CeEEEECCC-CceEEEEC-CCCC---CcceeEEECCCCCEEEEecC-------CCeEEEECCC-CCeEEecCCCCCCCCc
Confidence 368889988 77665432 2111 11223333 35778887532 2469999988 6665442211112223
Q ss_pred eeEEE-CCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEEE--CCEEEEEeCcccCCCCceeeeeEE
Q 018336 181 AAGEL-NGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVVI--GSEFWVVSGYKTERQGIFDESAES 257 (358)
Q Consensus 181 ~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~~~i~~ 257 (358)
+++.. ++.+|+.... ...+..||+. ++..... ++........+.+ ++++|+.... ...+.+
T Consensus 108 ~i~~~~~g~l~v~~~~------~~~i~~~~~~-g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~--------~~~i~~ 171 (300)
T 2qc5_A 108 GITEGLNGDIWFTQLN------GDRIGKLTAD-GTIYEYD-LPNKGSYPAFITLGSDNALWFTENQ--------NNSIGR 171 (300)
T ss_dssp EEEECSTTCEEEEETT------TTEEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSSEEEEETT--------TTEEEE
T ss_pred cceECCCCCEEEEccC------CCeEEEECCC-CCEEEcc-CCCCCCCceeEEECCCCCEEEEecC--------CCeEEE
Confidence 33332 5788887432 2468899987 6655432 2211122222333 5778887532 235788
Q ss_pred EECCCCceEEc
Q 018336 258 YQLGTGEWKRA 268 (358)
Q Consensus 258 yd~~~~~W~~~ 268 (358)
||+ +++...+
T Consensus 172 ~~~-~g~~~~~ 181 (300)
T 2qc5_A 172 ITN-TGKLEEY 181 (300)
T ss_dssp ECT-TCCEEEE
T ss_pred ECC-CCcEEEe
Confidence 988 6666653
No 58
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=95.50 E-value=0.62 Score=39.68 Aligned_cols=179 Identities=12% Similarity=0.060 Sum_probs=88.5
Q ss_pred ceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEE-CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceee
Q 018336 102 YGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASS-QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFF 180 (358)
Q Consensus 102 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~ 180 (358)
..+..||..+.+......+..... . -..++.. ++..++.|+.+ ..+.+||..+.+....-...... -.
T Consensus 119 ~~i~~~d~~~~~~~~~~~~~~~~~--~-i~~~~~~~~~~~l~~~~~d-------g~v~~~d~~~~~~~~~~~~~~~~-i~ 187 (337)
T 1gxr_A 119 STLSIWDLAAPTPRIKAELTSSAP--A-CYALAISPDSKVCFSCCSD-------GNIAVWDLHNQTLVRQFQGHTDG-AS 187 (337)
T ss_dssp SEEEEEECCCC--EEEEEEECSSS--C-EEEEEECTTSSEEEEEETT-------SCEEEEETTTTEEEEEECCCSSC-EE
T ss_pred CcEEEEECCCCCcceeeecccCCC--c-eEEEEECCCCCEEEEEeCC-------CcEEEEeCCCCceeeeeecccCc-eE
Confidence 367888988877443332222111 1 1122222 45566666532 36899999887643321111111 11
Q ss_pred eeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEE-EECCEEEEEeCcccCCCCceeeeeEEE
Q 018336 181 AAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAV-VIGSEFWVVSGYKTERQGIFDESAESY 258 (358)
Q Consensus 181 ~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~-~~~~~lyv~gG~~~~~~~~~~~~i~~y 258 (358)
+.+. -++..++.|+.+ ..+.+||..+.+-...-..+.. ...+. .-+++++++|+.. ..+..|
T Consensus 188 ~~~~~~~~~~l~~~~~d------g~i~~~d~~~~~~~~~~~~~~~--v~~~~~s~~~~~l~~~~~~--------~~i~~~ 251 (337)
T 1gxr_A 188 CIDISNDGTKLWTGGLD------NTVRSWDLREGRQLQQHDFTSQ--IFSLGYCPTGEWLAVGMES--------SNVEVL 251 (337)
T ss_dssp EEEECTTSSEEEEEETT------SEEEEEETTTTEEEEEEECSSC--EEEEEECTTSSEEEEEETT--------SCEEEE
T ss_pred EEEECCCCCEEEEEecC------CcEEEEECCCCceEeeecCCCc--eEEEEECCCCCEEEEEcCC--------CcEEEE
Confidence 2222 255566665533 4689999987654332222111 11222 2356666766542 357889
Q ss_pred ECCCCceEEcCCccccCCCCCceeeeeecCccCceeccccceeeceEEEEeCCeEEEECCCCCCCCceEEEEECCCCceE
Q 018336 259 QLGTGEWKRAENAWKLSQCPRSNVGVGREGKLFCWAETEAAVQFGTCRVELGGCTLVTGSGYQGGPQEFYVVEGRNGKFR 338 (358)
Q Consensus 259 d~~~~~W~~~~~~p~~~~~~~~~~~~~~d~~~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~~~~~~i~~yd~~~~~W~ 338 (358)
|..+.+-..+.... . .. .......++++++.++.+ ..+.+||..+++-.
T Consensus 252 ~~~~~~~~~~~~~~----~--~v---------------------~~~~~~~~~~~l~~~~~d----g~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 252 HVNKPDKYQLHLHE----S--CV---------------------LSLKFAYCGKWFVSTGKD----NLLNAWRTPYGASI 300 (337)
T ss_dssp ETTSSCEEEECCCS----S--CE---------------------EEEEECTTSSEEEEEETT----SEEEEEETTTCCEE
T ss_pred ECCCCCeEEEcCCc----c--ce---------------------eEEEECCCCCEEEEecCC----CcEEEEECCCCeEE
Confidence 98876533222110 0 00 011223356777777654 57888888876643
No 59
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=95.49 E-value=0.69 Score=39.40 Aligned_cols=105 Identities=16% Similarity=0.231 Sum_probs=54.7
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceee-eeEEE-CCEEEEEcCcCCCCCCCCeEEEEECCCCc
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFF-AAGEL-NGRVIIAGGHDENKTALSSAWAYDLIKDE 214 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~ 214 (358)
++..++.|+.+ ..+.+||..+.+......+....... ..+.. ++..++.|+.+ ..+.+||..+++
T Consensus 108 ~~~~l~~~~~d-------~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d------g~v~~~d~~~~~ 174 (337)
T 1gxr_A 108 DGCTLIVGGEA-------STLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD------GNIAVWDLHNQT 174 (337)
T ss_dssp TSSEEEEEESS-------SEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETT------SCEEEEETTTTE
T ss_pred CCCEEEEEcCC-------CcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCC------CcEEEEeCCCCc
Confidence 45556666532 47999999887754332222211111 22222 45566666543 358999998875
Q ss_pred eEecCCCccCcCceeEEEE--CCEEEEEeCcccCCCCceeeeeEEEECCCCc
Q 018336 215 WTELARMTQERDECEAVVI--GSEFWVVSGYKTERQGIFDESAESYQLGTGE 264 (358)
Q Consensus 215 W~~~~~~p~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~ 264 (358)
....- .........+.+ +++.++.++. ...+..||..+.+
T Consensus 175 ~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~--------dg~i~~~d~~~~~ 216 (337)
T 1gxr_A 175 LVRQF--QGHTDGASCIDISNDGTKLWTGGL--------DNTVRSWDLREGR 216 (337)
T ss_dssp EEEEE--CCCSSCEEEEEECTTSSEEEEEET--------TSEEEEEETTTTE
T ss_pred eeeee--ecccCceEEEEECCCCCEEEEEec--------CCcEEEEECCCCc
Confidence 43321 111112222233 5666666654 2357889988764
No 60
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=95.46 E-value=1.1 Score=40.00 Aligned_cols=145 Identities=12% Similarity=0.034 Sum_probs=73.1
Q ss_pred eEEEEeCCCCCeeecCCCCCC-CCCCCceeEEEE-ECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceee
Q 018336 103 GVTVFDPVSLTWDRLGPVPEY-PAGLPLFCQVAS-SQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFF 180 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~~-~~~~~~~~~~~~-~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~ 180 (358)
.+..||..+++.......... .+. ..-..++. .++.+++.++. ...+.+||..+.+....-.... ..-.
T Consensus 145 ~i~~~d~~~g~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~s~~~-------d~~v~~~d~~~~~~~~~~~~~~-~~~~ 215 (433)
T 3bws_A 145 GMDVLDINSGQTVRLSPPEKYKKKL-GFVETISIPEHNELWVSQMQ-------ANAVHVFDLKTLAYKATVDLTG-KWSK 215 (433)
T ss_dssp SEEEEETTTCCEEEECCCHHHHTTC-CEEEEEEEGGGTEEEEEEGG-------GTEEEEEETTTCCEEEEEECSS-SSEE
T ss_pred eEEEEECCCCeEeeecCcccccccC-CceeEEEEcCCCEEEEEECC-------CCEEEEEECCCceEEEEEcCCC-CCee
Confidence 588899998877654332110 000 01112222 26788888763 2479999998765432211111 1112
Q ss_pred eeEEE--CCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEEE--CCEEEEEeCcccCCCCceeeeeE
Q 018336 181 AAGEL--NGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVVI--GSEFWVVSGYKTERQGIFDESAE 256 (358)
Q Consensus 181 ~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~~~i~ 256 (358)
..+.. +..+|+.++.+ ..+.+||+.+++....-... .. ...+.+ +++.+++++............+.
T Consensus 216 ~~~~~~~~~~l~~~~~~~------~~i~~~d~~~~~~~~~~~~~--~~-~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~ 286 (433)
T 3bws_A 216 ILLYDPIRDLVYCSNWIS------EDISVIDRKTKLEIRKTDKI--GL-PRGLLLSKDGKELYIAQFSASNQESGGGRLG 286 (433)
T ss_dssp EEEEETTTTEEEEEETTT------TEEEEEETTTTEEEEECCCC--SE-EEEEEECTTSSEEEEEEEESCTTCSCCEEEE
T ss_pred EEEEcCCCCEEEEEecCC------CcEEEEECCCCcEEEEecCC--CC-ceEEEEcCCCCEEEEEECCCCccccCCCeEE
Confidence 22222 45677775432 36999999887654332221 11 222222 55554454432211000134788
Q ss_pred EEECCCCce
Q 018336 257 SYQLGTGEW 265 (358)
Q Consensus 257 ~yd~~~~~W 265 (358)
+||+.+++-
T Consensus 287 ~~d~~~~~~ 295 (433)
T 3bws_A 287 IYSMDKEKL 295 (433)
T ss_dssp EEETTTTEE
T ss_pred EEECCCCcE
Confidence 999987754
No 61
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=95.42 E-value=0.42 Score=40.55 Aligned_cols=142 Identities=10% Similarity=0.025 Sum_probs=71.7
Q ss_pred eEEEEeCCCCCeeecCCCCCCCCCCCceeEEEE-EC-CEEEEEcCcCCCCCCCcceeEEEECCCCcEEeC-CCCCCC--c
Q 018336 103 GVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVAS-SQ-GKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRG-KNMPDN--R 177 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~-~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~-~~~~~~--~ 177 (358)
.+..||+.++++..+......... .....++. .+ +.+|+... .+.+++||+. ++...+ ...... .
T Consensus 47 ~i~~~d~~~g~~~~~~~~~~~~~~-~~~~~i~~~~~~g~l~v~~~--------~~~l~~~d~~-g~~~~~~~~~~~~~~~ 116 (314)
T 1pjx_A 47 EILRIDLKTGKKTVICKPEVNGYG-GIPAGCQCDRDANQLFVADM--------RLGLLVVQTD-GTFEEIAKKDSEGRRM 116 (314)
T ss_dssp EEEEECTTTCCEEEEECCEETTEE-CCEEEEEECSSSSEEEEEET--------TTEEEEEETT-SCEEECCSBCTTSCBC
T ss_pred EEEEEeCCCCcEEEEEecccCCCC-CCCceEEEecCCCcEEEEEC--------CCCEEEEeCC-CCEEEEEeccCCCccc
Confidence 688999988888765331000000 01123333 24 78888764 1369999998 777665 332211 1
Q ss_pred e-eeeeEE-ECCEEEEEcCcCC---------CCCCCCeEEEEECCCCceEecCCCccCcCceeEEEE-----CC-EEEEE
Q 018336 178 S-FFAAGE-LNGRVIIAGGHDE---------NKTALSSAWAYDLIKDEWTELARMTQERDECEAVVI-----GS-EFWVV 240 (358)
Q Consensus 178 ~-~~~~~~-~~~~iyv~GG~~~---------~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~-----~~-~lyv~ 240 (358)
. -...+. -++.+|+...... .......++.||+. ++...+..- ......++.. ++ .+|+.
T Consensus 117 ~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~--~~~~~~i~~~~~~d~dg~~l~v~ 193 (314)
T 1pjx_A 117 QGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTA--FQFPNGIAVRHMNDGRPYQLIVA 193 (314)
T ss_dssp BCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEE--ESSEEEEEEEECTTSCEEEEEEE
T ss_pred cCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccC--CCCcceEEEecccCCCCCEEEEE
Confidence 1 122222 3578888754220 11112468889887 555543211 0111223333 34 46776
Q ss_pred eCcccCCCCceeeeeEEEECC-CCce
Q 018336 241 SGYKTERQGIFDESAESYQLG-TGEW 265 (358)
Q Consensus 241 gG~~~~~~~~~~~~i~~yd~~-~~~W 265 (358)
... ...+.+||+. +++.
T Consensus 194 ~~~--------~~~i~~~~~~~~g~~ 211 (314)
T 1pjx_A 194 ETP--------TKKLWSYDIKGPAKI 211 (314)
T ss_dssp ETT--------TTEEEEEEEEETTEE
T ss_pred ECC--------CCeEEEEECCCCCcc
Confidence 532 2357788875 4443
No 62
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=95.29 E-value=0.26 Score=42.76 Aligned_cols=147 Identities=10% Similarity=0.040 Sum_probs=74.4
Q ss_pred cceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCcee-
Q 018336 101 SYGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSF- 179 (358)
Q Consensus 101 ~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~- 179 (358)
...++.+|+.++++..+........ +.. .+..-+++||+.+.... ...+++||..+.+++.+..+......
T Consensus 17 ~i~v~~~d~~tg~~~~~~~~~~~~~--p~~-~a~spdg~l~~~~~~~~-----~~~v~~~~~~~g~~~~~~~~~~~~~~p 88 (347)
T 3hfq_A 17 GIYQGTLDTTAKTLTNDGLLAATQN--PTY-LALSAKDCLYSVDKEDD-----EGGIAAWQIDGQTAHKLNTVVAPGTPP 88 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEEEECSC--CCC-EEECTTCEEEEEEEETT-----EEEEEEEEEETTEEEEEEEEEEESCCC
T ss_pred CEEEEEEcCCCCeEEEeeeeeccCC--cce-EEEccCCeEEEEEecCC-----CceEEEEEecCCcEEEeeeeecCCCCC
Confidence 3568888998888766432211110 111 22233677887764211 35799999988877665432211111
Q ss_pred eeeEE-ECC-EEEEEcCcCCCCCCCCeEEEEECC-CCceEecCCCcc------Cc---Ccee-EE-EECCEEEEEeCccc
Q 018336 180 FAAGE-LNG-RVIIAGGHDENKTALSSAWAYDLI-KDEWTELARMTQ------ER---DECE-AV-VIGSEFWVVSGYKT 245 (358)
Q Consensus 180 ~~~~~-~~~-~iyv~GG~~~~~~~~~~~~~yd~~-t~~W~~~~~~p~------~~---~~~~-~~-~~~~~lyv~gG~~~ 245 (358)
..++. -++ .+|+.+.. ...+.+|+.. ++..+.+..... .+ .... ++ .-+|++|+.+..
T Consensus 89 ~~~a~spdg~~l~~~~~~------~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~-- 160 (347)
T 3hfq_A 89 AYVAVDEARQLVYSANYH------KGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLG-- 160 (347)
T ss_dssp SEEEEETTTTEEEEEETT------TTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETT--
T ss_pred EEEEECCCCCEEEEEeCC------CCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCC--
Confidence 12222 244 57766421 2457888874 444443332211 01 0111 22 236777776532
Q ss_pred CCCCceeeeeEEEECC-CCceEEcC
Q 018336 246 ERQGIFDESAESYQLG-TGEWKRAE 269 (358)
Q Consensus 246 ~~~~~~~~~i~~yd~~-~~~W~~~~ 269 (358)
...+.+||.. +++...+.
T Consensus 161 ------~~~v~~~~~~~~g~~~~~~ 179 (347)
T 3hfq_A 161 ------SDKVYVYNVSDAGQLSEQS 179 (347)
T ss_dssp ------TTEEEEEEECTTSCEEEEE
T ss_pred ------CCEEEEEEECCCCcEEEee
Confidence 2357788887 56655443
No 63
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=95.28 E-value=1.2 Score=37.79 Aligned_cols=133 Identities=17% Similarity=0.270 Sum_probs=67.3
Q ss_pred eEEEEeCCCCCeeecCCCCCCCCCCCceeEEEE-ECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEe-CCCCCCCceee
Q 018336 103 GVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVAS-SQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTR-GKNMPDNRSFF 180 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~-~~~~~~~~~~~ 180 (358)
.+..||..+++....-.-... .. ..++. -++.+++.|+.+ ..+.+||..+.+-.. +..-. .. -.
T Consensus 46 ~i~iw~~~~~~~~~~~~~h~~----~v-~~~~~~~~~~~l~s~~~d-------~~i~vwd~~~~~~~~~~~~~~-~~-v~ 111 (312)
T 4ery_A 46 LIKIWGAYDGKFEKTISGHKL----GI-SDVAWSSDSNLLVSASDD-------KTLKIWDVSSGKCLKTLKGHS-NY-VF 111 (312)
T ss_dssp CEEEEETTTCCEEEEECCCSS----CE-EEEEECTTSSEEEEEETT-------SEEEEEETTTCCEEEEEECCS-SC-EE
T ss_pred eEEEEeCCCcccchhhccCCC----ce-EEEEEcCCCCEEEEECCC-------CEEEEEECCCCcEEEEEcCCC-CC-EE
Confidence 577788877766443211110 11 12222 255666666643 378999988765322 11100 01 11
Q ss_pred eeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEEE--CCEEEEEeCcccCCCCceeeeeEE
Q 018336 181 AAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVVI--GSEFWVVSGYKTERQGIFDESAES 257 (358)
Q Consensus 181 ~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~~~i~~ 257 (358)
+.+. -++.+++.|+.+. .+.+||..+++-.. .++........+.+ ++++++.|+.+ ..+..
T Consensus 112 ~~~~~~~~~~l~s~~~d~------~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d--------~~i~~ 175 (312)
T 4ery_A 112 CCNFNPQSNLIVSGSFDE------SVRIWDVKTGKCLK--TLPAHSDPVSAVHFNRDGSLIVSSSYD--------GLCRI 175 (312)
T ss_dssp EEEECSSSSEEEEEETTS------CEEEEETTTCCEEE--EECCCSSCEEEEEECTTSSEEEEEETT--------SCEEE
T ss_pred EEEEcCCCCEEEEEeCCC------cEEEEECCCCEEEE--EecCCCCcEEEEEEcCCCCEEEEEeCC--------CcEEE
Confidence 1111 2455666666543 48999998765322 11111111222222 56677777653 35678
Q ss_pred EECCCCce
Q 018336 258 YQLGTGEW 265 (358)
Q Consensus 258 yd~~~~~W 265 (358)
||..+++-
T Consensus 176 wd~~~~~~ 183 (312)
T 4ery_A 176 WDTASGQC 183 (312)
T ss_dssp EETTTCCE
T ss_pred EECCCCce
Confidence 99887654
No 64
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=95.24 E-value=0.49 Score=41.11 Aligned_cols=97 Identities=14% Similarity=0.204 Sum_probs=51.3
Q ss_pred ceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEE-CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCC-CCcee
Q 018336 102 YGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASS-QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMP-DNRSF 179 (358)
Q Consensus 102 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~-~~~~~ 179 (358)
..+..||..++++..+..+..... ... +++.. ++.+++.|+.+ ..+.+||..+.++.....+. ....-
T Consensus 30 ~~v~i~~~~~~~~~~~~~~~~h~~--~v~-~~~~~~~~~~l~~~~~d-------g~i~vwd~~~~~~~~~~~~~~~~~~v 99 (372)
T 1k8k_C 30 HEVHIYEKSGNKWVQVHELKEHNG--QVT-GVDWAPDSNRIVTCGTD-------RNAYVWTLKGRTWKPTLVILRINRAA 99 (372)
T ss_dssp SEEEEEEEETTEEEEEEEEECCSS--CEE-EEEEETTTTEEEEEETT-------SCEEEEEEETTEEEEEEECCCCSSCE
T ss_pred CEEEEEeCCCCcEEeeeeecCCCC--ccc-EEEEeCCCCEEEEEcCC-------CeEEEEECCCCeeeeeEEeecCCCce
Confidence 368889998887655544432211 111 23322 56666666532 36899999888765432221 11111
Q ss_pred eeeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCc
Q 018336 180 FAAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDE 214 (358)
Q Consensus 180 ~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~ 214 (358)
.+++. -++..++.|+.+ ..+.+||..+..
T Consensus 100 ~~~~~~~~~~~l~~~~~d------~~v~i~d~~~~~ 129 (372)
T 1k8k_C 100 RCVRWAPNEKKFAVGSGS------RVISICYFEQEN 129 (372)
T ss_dssp EEEEECTTSSEEEEEETT------SSEEEEEEETTT
T ss_pred eEEEECCCCCEEEEEeCC------CEEEEEEecCCC
Confidence 22222 245566666543 347777776543
No 65
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=95.24 E-value=1.3 Score=37.98 Aligned_cols=141 Identities=9% Similarity=0.024 Sum_probs=73.4
Q ss_pred eEEEEeCCCCCeeecCCCCCCCCCCCceeEEEE-ECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEe-CCCCCCCceee
Q 018336 103 GVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVAS-SQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTR-GKNMPDNRSFF 180 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~-~~~~~~~~~~~ 180 (358)
.+..||+.+++...+...+. ..-.+++. -++.+|+....... ....+++||+.+...+. +........-.
T Consensus 67 ~i~~~d~~~~~~~~~~~~~~-----~~~~~i~~~~dg~l~v~~~~~~~---~~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 138 (333)
T 2dg1_A 67 NIFKINPETKEIKRPFVSHK-----ANPAAIKIHKDGRLFVCYLGDFK---STGGIFAATENGDNLQDIIEDLSTAYCID 138 (333)
T ss_dssp EEEEECTTTCCEEEEEECSS-----SSEEEEEECTTSCEEEEECTTSS---SCCEEEEECTTSCSCEEEECSSSSCCCEE
T ss_pred EEEEEeCCCCcEEEEeeCCC-----CCcceEEECCCCcEEEEeCCCCC---CCceEEEEeCCCCEEEEEEccCccCCccc
Confidence 68899999888766532111 01123333 36678877542211 12479999998887653 22211111112
Q ss_pred eeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEEE--CC-EEEEEeCcccCCCCceeeeeE
Q 018336 181 AAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVVI--GS-EFWVVSGYKTERQGIFDESAE 256 (358)
Q Consensus 181 ~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~~-~lyv~gG~~~~~~~~~~~~i~ 256 (358)
..+. -++.+|+.............++.||+.+++.+.+..- ......+.+ ++ .+|+.... ...+.
T Consensus 139 ~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~i~~~~dg~~l~v~~~~--------~~~i~ 207 (333)
T 2dg1_A 139 DMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN---ISVANGIALSTDEKVLWVTETT--------ANRLH 207 (333)
T ss_dssp EEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE---ESSEEEEEECTTSSEEEEEEGG--------GTEEE
T ss_pred ceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC---CCcccceEECCCCCEEEEEeCC--------CCeEE
Confidence 2222 2577887643211111235789999887776654311 111122222 44 47776532 23678
Q ss_pred EEECCC
Q 018336 257 SYQLGT 262 (358)
Q Consensus 257 ~yd~~~ 262 (358)
+||+.+
T Consensus 208 ~~d~~~ 213 (333)
T 2dg1_A 208 RIALED 213 (333)
T ss_dssp EEEECT
T ss_pred EEEecC
Confidence 888864
No 66
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=95.20 E-value=1.5 Score=42.91 Aligned_cols=186 Identities=13% Similarity=0.122 Sum_probs=93.9
Q ss_pred eEEEEeCCCCCeeecCCCCC--CCCCCC--ceeEEEEE-CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCC---CC
Q 018336 103 GVTVFDPVSLTWDRLGPVPE--YPAGLP--LFCQVASS-QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKN---MP 174 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~--~~~~~~--~~~~~~~~-~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~---~~ 174 (358)
.+..|++.+..+......+. ...... .-.+++.. ++.|++-.. ..-+.+||+.+++++.... ++
T Consensus 334 Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~--------~~Gl~~~~~~~~~~~~~~~~~~~~ 405 (781)
T 3v9f_A 334 GINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTD--------GGGINVFENGKRVAIYNKENRELL 405 (781)
T ss_dssp CEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEB--------SSCEEEEETTEEEEECC-----CC
T ss_pred eEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeC--------CCcEEEEECCCCeEEEccCCCCCC
Confidence 46667777776665532211 000101 11122222 467776531 1248899998887776531 11
Q ss_pred CCceeeeeEEE-CCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEEE--CCEEEEEeCcccCCCCce
Q 018336 175 DNRSFFAAGEL-NGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVVI--GSEFWVVSGYKTERQGIF 251 (358)
Q Consensus 175 ~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~ 251 (358)
.. .-.+.+.. ++.|++ |... .-+..||+.+++++.+............+.. +|.|++-..
T Consensus 406 ~~-~v~~i~~d~~g~lWi-gt~~------~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~--------- 468 (781)
T 3v9f_A 406 SN-SVLCSLKDSEGNLWF-GTYL------GNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH--------- 468 (781)
T ss_dssp CS-BEEEEEECTTSCEEE-EETT------EEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET---------
T ss_pred Cc-ceEEEEECCCCCEEE-Eecc------CCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC---------
Confidence 11 11222222 566766 3221 3589999999999887632111111122222 466776531
Q ss_pred eeeeEEEECCCCceEEcCCccccCCCCCceeeeeecCccCceeccccceeeceEEEEeCCeEEEECCCCCCCCceEEEEE
Q 018336 252 DESAESYQLGTGEWKRAENAWKLSQCPRSNVGVGREGKLFCWAETEAAVQFGTCRVELGGCTLVTGSGYQGGPQEFYVVE 331 (358)
Q Consensus 252 ~~~i~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~d~~~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~~~~~~i~~yd 331 (358)
..+.+||+.+++|..+....... ..... ....+...+++|+|-... ..+++||
T Consensus 469 -~Gl~~~~~~~~~~~~~~~~~~~~-~~~~~--------------------i~~i~~d~~g~lWigt~~-----~Gl~~~~ 521 (781)
T 3v9f_A 469 -AGVFVIDLASKKVIHHYDTSNSQ-LLENF--------------------VRSIAQDSEGRFWIGTFG-----GGVGIYT 521 (781)
T ss_dssp -TEEEEEESSSSSCCEEECTTTSS-CSCSC--------------------EEEEEECTTCCEEEEESS-----SCEEEEC
T ss_pred -CceEEEeCCCCeEEecccCcccc-cccce--------------------eEEEEEcCCCCEEEEEcC-----CCEEEEe
Confidence 24688999998887665332100 00000 011123345677664321 3688888
Q ss_pred CCCCceEee
Q 018336 332 GRNGKFRKF 340 (358)
Q Consensus 332 ~~~~~W~~~ 340 (358)
+.+++++..
T Consensus 522 ~~~~~~~~~ 530 (781)
T 3v9f_A 522 PDMQLVRKF 530 (781)
T ss_dssp TTCCEEEEE
T ss_pred CCCCeEEEc
Confidence 888888776
No 67
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=95.05 E-value=1.2 Score=36.85 Aligned_cols=180 Identities=7% Similarity=-0.125 Sum_probs=95.7
Q ss_pred ceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEE--CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCcee
Q 018336 102 YGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASS--QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSF 179 (358)
Q Consensus 102 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~--~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~ 179 (358)
..+..+|+....-..+..... .....++.. ++.||+.... ...+.++|+....-+.+........
T Consensus 58 ~~I~~~~~~g~~~~~~~~~~~-----~~p~~ia~d~~~~~lyv~d~~-------~~~I~~~~~~g~~~~~~~~~~~~~P- 124 (267)
T 1npe_A 58 PSIGRASLHGGEPTTIIRQDL-----GSPEGIALDHLGRTIFWTDSQ-------LDRIEVAKMDGTQRRVLFDTGLVNP- 124 (267)
T ss_dssp TEEEEEESSSCCCEEEECTTC-----CCEEEEEEETTTTEEEEEETT-------TTEEEEEETTSCSCEEEECSSCSSE-
T ss_pred CEEEEEecCCCCcEEEEECCC-----CCccEEEEEecCCeEEEEECC-------CCEEEEEEcCCCCEEEEEECCCCCc-
Confidence 368888887654333221111 112244443 6799998642 3578999987544333322111121
Q ss_pred eeeEEE--CCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEEE---CCEEEEEeCcccCCCCceeee
Q 018336 180 FAAGEL--NGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVVI---GSEFWVVSGYKTERQGIFDES 254 (358)
Q Consensus 180 ~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~---~~~lyv~gG~~~~~~~~~~~~ 254 (358)
...+.. ++.+|+..... ....++++++....-+.+.... ......+.+ +++||+.... .+.
T Consensus 125 ~~i~vd~~~g~lyv~~~~~----~~~~I~~~~~dg~~~~~~~~~~--~~~P~gia~d~~~~~lyv~d~~--------~~~ 190 (267)
T 1npe_A 125 RGIVTDPVRGNLYWTDWNR----DNPKIETSHMDGTNRRILAQDN--LGLPNGLTFDAFSSQLCWVDAG--------THR 190 (267)
T ss_dssp EEEEEETTTTEEEEEECCS----SSCEEEEEETTSCCCEEEECTT--CSCEEEEEEETTTTEEEEEETT--------TTE
T ss_pred cEEEEeeCCCEEEEEECCC----CCcEEEEEecCCCCcEEEEECC--CCCCcEEEEcCCCCEEEEEECC--------CCE
Confidence 233332 68999985321 1257888888654333332111 112223333 4679998643 346
Q ss_pred eEEEECCCCceEEcCCccccCCCCCceeeeeecCccCceeccccceeeceEEEEeCCeEEEECCCCCCCCceEEEEECCC
Q 018336 255 AESYQLGTGEWKRAENAWKLSQCPRSNVGVGREGKLFCWAETEAAVQFGTCRVELGGCTLVTGSGYQGGPQEFYVVEGRN 334 (358)
Q Consensus 255 i~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~d~~~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~~~~~~i~~yd~~~ 334 (358)
|.+||+....-..+... . ....+++..++.||+..... +.|.++|+.+
T Consensus 191 I~~~~~~g~~~~~~~~~---~-------------------------~~P~gi~~d~~~lyva~~~~----~~v~~~d~~~ 238 (267)
T 1npe_A 191 AECLNPAQPGRRKVLEG---L-------------------------QYPFAVTSYGKNLYYTDWKT----NSVIAMDLAI 238 (267)
T ss_dssp EEEEETTEEEEEEEEEC---C-------------------------CSEEEEEEETTEEEEEETTT----TEEEEEETTT
T ss_pred EEEEecCCCceEEEecC---C-------------------------CCceEEEEeCCEEEEEECCC----CeEEEEeCCC
Confidence 88899875422211110 0 01123455689999975433 6899999998
Q ss_pred CceEee
Q 018336 335 GKFRKF 340 (358)
Q Consensus 335 ~~W~~~ 340 (358)
++-...
T Consensus 239 g~~~~~ 244 (267)
T 1npe_A 239 SKEMDT 244 (267)
T ss_dssp TEEEEE
T ss_pred CCceEE
Confidence 765433
No 68
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=95.03 E-value=1.3 Score=36.96 Aligned_cols=136 Identities=6% Similarity=-0.053 Sum_probs=72.5
Q ss_pred eEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEE-CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeee
Q 018336 103 GVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASS-QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFA 181 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~ 181 (358)
.+..||+. ++...+. ++... .....++.. ++.+|+.... ...+++||+ +.+..............+
T Consensus 79 ~i~~~~~~-g~~~~~~-~~~~~---~~~~~i~~~~~g~l~v~~~~-------~~~i~~~d~-~g~~~~~~~~~~~~~~~~ 145 (299)
T 2z2n_A 79 KIGRITKK-GIIKEYT-LPNPD---SAPYGITEGPNGDIWFTEMN-------GNRIGRITD-DGKIREYELPNKGSYPSF 145 (299)
T ss_dssp EEEEECTT-SCEEEEE-CSSTT---CCEEEEEECTTSCEEEEETT-------TTEEEEECT-TCCEEEEECSSTTCCEEE
T ss_pred eEEEECCC-CcEEEEe-CCCcC---CCceeeEECCCCCEEEEecC-------CceEEEECC-CCCEEEecCCCCCCCCce
Confidence 57888886 4554443 12111 112234433 5788887532 247899999 666654321111112223
Q ss_pred eEEE-CCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEEE--CCEEEEEeCcccCCCCceeeeeEEE
Q 018336 182 AGEL-NGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVVI--GSEFWVVSGYKTERQGIFDESAESY 258 (358)
Q Consensus 182 ~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~~~i~~y 258 (358)
.+.. ++.+|+.... ...+.+||+ +++...+. .+........+.+ +|++|+.... ...+.+|
T Consensus 146 i~~~~~g~l~v~~~~------~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~--------~~~i~~~ 209 (299)
T 2z2n_A 146 ITLGSDNALWFTENQ------NNAIGRITE-SGDITEFK-IPTPASGPVGITKGNDDALWFVEII--------GNKIGRI 209 (299)
T ss_dssp EEECTTSCEEEEETT------TTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECTTSSEEEEETT--------TTEEEEE
T ss_pred EEEcCCCCEEEEeCC------CCEEEEEcC-CCcEEEee-CCCCCCcceeEEECCCCCEEEEccC--------CceEEEE
Confidence 3332 5788886421 246899999 77776542 1211122223333 5678887532 2357889
Q ss_pred ECCCCceEEc
Q 018336 259 QLGTGEWKRA 268 (358)
Q Consensus 259 d~~~~~W~~~ 268 (358)
|+ +++...+
T Consensus 210 ~~-~g~~~~~ 218 (299)
T 2z2n_A 210 TT-SGEITEF 218 (299)
T ss_dssp CT-TCCEEEE
T ss_pred CC-CCcEEEE
Confidence 99 7776654
No 69
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=94.84 E-value=3 Score=40.17 Aligned_cols=108 Identities=21% Similarity=0.187 Sum_probs=61.6
Q ss_pred ceEEEEeCCCCC--eeecCCCCCCCC----CCCceeEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCCc--EEeCCC-
Q 018336 102 YGVTVFDPVSLT--WDRLGPVPEYPA----GLPLFCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRR--WTRGKN- 172 (358)
Q Consensus 102 ~~~~~~d~~~~~--W~~~~~~~~~~~----~~~~~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~--W~~~~~- 172 (358)
..++++|..+++ |+.-...+.... .......++..++.||+... ...++.+|..|.+ |+.-..
T Consensus 87 ~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~--------dg~l~alD~~tG~~~W~~~~~~ 158 (677)
T 1kb0_A 87 SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW--------DGRLIALDAATGKEVWHQNTFE 158 (677)
T ss_dssp GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT--------TSEEEEEETTTCCEEEEEETTT
T ss_pred CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC--------CCEEEEEECCCCCEEeeecCCc
Confidence 368899998775 876544321000 00011234567888888743 2479999998775 765322
Q ss_pred -CCC-CceeeeeEEECCEEEEEcCcCCCCCCCCeEEEEECCCCc--eEec
Q 018336 173 -MPD-NRSFFAAGELNGRVIIAGGHDENKTALSSAWAYDLIKDE--WTEL 218 (358)
Q Consensus 173 -~~~-~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~ 218 (358)
.+. .....+.++.++.+|+..+..+. .....+..||..|++ |+.-
T Consensus 159 ~~~~~~~~~~~p~v~~~~v~v~~~~~~~-~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 159 GQKGSLTITGAPRVFKGKVIIGNGGAEY-GVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp TCCSSCBCCSCCEEETTEEEECCBCTTT-CCBCEEEEEETTTCCEEEEEE
T ss_pred CcCcCcccccCcEEECCEEEEEeccccc-CCCCEEEEEECCCCcEEEEec
Confidence 111 11222334568888876442221 124679999998775 8753
No 70
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=94.82 E-value=1.4 Score=36.36 Aligned_cols=145 Identities=10% Similarity=-0.005 Sum_probs=76.2
Q ss_pred ceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEECCEEEEEcCcCCCCCCCcceeEEEECCC-CcEEeCCCCCCCceee
Q 018336 102 YGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTT-RRWTRGKNMPDNRSFF 180 (358)
Q Consensus 102 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t-~~W~~~~~~~~~~~~~ 180 (358)
..+..+|..+++...+..... ........-++..+++++ ...+++||..+ .+...+........-.
T Consensus 22 ~~i~~~d~~~~~~~~~~~~~~-----~v~~~~~spdg~~l~~~~--------~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 88 (297)
T 2ojh_A 22 SSIEIFNIRTRKMRVVWQTPE-----LFEAPNWSPDGKYLLLNS--------EGLLYRLSLAGDPSPEKVDTGFATICNN 88 (297)
T ss_dssp EEEEEEETTTTEEEEEEEESS-----CCEEEEECTTSSEEEEEE--------TTEEEEEESSSCCSCEECCCTTCCCBCS
T ss_pred eeEEEEeCCCCceeeeccCCc-----ceEeeEECCCCCEEEEEc--------CCeEEEEeCCCCCCceEecccccccccc
Confidence 468889998887765543322 112122223555555553 23799999998 7776654333211111
Q ss_pred eeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEE-EECCE-EEEEeCcccCCCCceeeeeEE
Q 018336 181 AAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAV-VIGSE-FWVVSGYKTERQGIFDESAES 257 (358)
Q Consensus 181 ~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~-~~~~~-lyv~gG~~~~~~~~~~~~i~~ 257 (358)
..+. -+++.+++++.... ....++.++..++.-+.+..... ..... .-+++ |++.++... ...++.
T Consensus 89 ~~~~spdg~~l~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~spdg~~l~~~~~~~~------~~~l~~ 157 (297)
T 2ojh_A 89 DHGISPDGALYAISDKVEF--GKSAIYLLPSTGGTPRLMTKNLP---SYWHGWSPDGKSFTYCGIRDQ------VFDIYS 157 (297)
T ss_dssp CCEECTTSSEEEEEECTTT--SSCEEEEEETTCCCCEECCSSSS---EEEEEECTTSSEEEEEEEETT------EEEEEE
T ss_pred ceEECCCCCEEEEEEeCCC--CcceEEEEECCCCceEEeecCCC---ccceEECCCCCEEEEEECCCC------ceEEEE
Confidence 2222 24554555443221 24678999988877665543321 11222 22555 444443321 236777
Q ss_pred EECCCCceEEcCC
Q 018336 258 YQLGTGEWKRAEN 270 (358)
Q Consensus 258 yd~~~~~W~~~~~ 270 (358)
+|..++....+..
T Consensus 158 ~~~~~~~~~~~~~ 170 (297)
T 2ojh_A 158 MDIDSGVETRLTH 170 (297)
T ss_dssp EETTTCCEEECCC
T ss_pred EECCCCcceEccc
Confidence 7787777665543
No 71
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=94.73 E-value=1.6 Score=36.63 Aligned_cols=138 Identities=10% Similarity=-0.000 Sum_probs=72.1
Q ss_pred ceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEE-ECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCC----
Q 018336 102 YGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVAS-SQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDN---- 176 (358)
Q Consensus 102 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~---- 176 (358)
..+..||+.++ ...+..... ...+++. -++.+|+.... ...+.+||+.+.+.+.+......
T Consensus 50 ~~i~~~~~~~~-~~~~~~~~~------~~~~l~~~~dg~l~v~~~~-------~~~i~~~d~~~g~~~~~~~~~~~~~~~ 115 (296)
T 3e5z_A 50 NRTWAWSDDGQ-LSPEMHPSH------HQNGHCLNKQGHLIACSHG-------LRRLERQREPGGEWESIADSFEGKKLN 115 (296)
T ss_dssp TEEEEEETTSC-EEEEESSCS------SEEEEEECTTCCEEEEETT-------TTEEEEECSTTCCEEEEECEETTEECC
T ss_pred CEEEEEECCCC-eEEEECCCC------CcceeeECCCCcEEEEecC-------CCeEEEEcCCCCcEEEEeeccCCCCCC
Confidence 36889999987 555433211 1123333 35778776531 24799999988887765321111
Q ss_pred ceeeeeEEECCEEEEE----cCcCC-------CCCCCCeEEEEECCCCceEecCCCccCcCceeEEEE--CCEEEEEeCc
Q 018336 177 RSFFAAGELNGRVIIA----GGHDE-------NKTALSSAWAYDLIKDEWTELARMTQERDECEAVVI--GSEFWVVSGY 243 (358)
Q Consensus 177 ~~~~~~~~~~~~iyv~----GG~~~-------~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~~~lyv~gG~ 243 (358)
+....+..-++.+|+. |.... .......++.|++. ++.+.+..- ......+.+ ++++++....
T Consensus 116 ~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~---~~~~~gi~~s~dg~~lv~~~~ 191 (296)
T 3e5z_A 116 SPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRD---RVKPNGLAFLPSGNLLVSDTG 191 (296)
T ss_dssp CCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECC---CSSEEEEEECTTSCEEEEETT
T ss_pred CCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecC---CCCCccEEECCCCCEEEEeCC
Confidence 1111222236788886 43110 00113478899887 555543211 111122333 5666644422
Q ss_pred ccCCCCceeeeeEEEECC-CCce
Q 018336 244 KTERQGIFDESAESYQLG-TGEW 265 (358)
Q Consensus 244 ~~~~~~~~~~~i~~yd~~-~~~W 265 (358)
...+++||+. +++.
T Consensus 192 --------~~~i~~~~~~~~g~~ 206 (296)
T 3e5z_A 192 --------DNATHRYCLNARGET 206 (296)
T ss_dssp --------TTEEEEEEECSSSCE
T ss_pred --------CCeEEEEEECCCCcC
Confidence 2367888876 4555
No 72
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=94.64 E-value=1.6 Score=41.53 Aligned_cols=192 Identities=15% Similarity=0.070 Sum_probs=100.1
Q ss_pred ceEEEEeCCC------CCeeecC-CCCCCCCCCCceeEEEEECCE-EEEEcCcCCCCCC-CcceeEEEECC-CC---cEE
Q 018336 102 YGVTVFDPVS------LTWDRLG-PVPEYPAGLPLFCQVASSQGK-LVVMGGWDPASYS-PVSHVFVYDFT-TR---RWT 168 (358)
Q Consensus 102 ~~~~~~d~~~------~~W~~~~-~~~~~~~~~~~~~~~~~~~~~-lyv~Gg~~~~~~~-~~~~~~~yd~~-t~---~W~ 168 (358)
..++.+|..+ +.-..+. .-.. .......+-+++ |+... .+..... ...+++++|.. +. ..+
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~SpDG~~la~~~-~~~~~~~~~~~~i~~~d~~~~g~~~~~~ 234 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDAHR-----FVTGPRLSPDGRQAVWLA-WDHPRMPWEGTELKTARVTEDGRFADTR 234 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSCSS-----EECCCEECTTSSEEEEEE-ECTTCCTTTCEEEEEEEECTTSCEEEEE
T ss_pred eEEEEEECCCCccccCCceeEEEecCCC-----cccCceECCCCCEEEEEE-CCCCCCCCCCcEEEEEEECCCCcccccE
Confidence 5788889887 5655554 2111 011112223444 44433 2211100 13579999998 56 333
Q ss_pred eCCCCCCCceeeeeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCc----C---ceeEEEE-CCEEEE
Q 018336 169 RGKNMPDNRSFFAAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQER----D---ECEAVVI-GSEFWV 239 (358)
Q Consensus 169 ~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~----~---~~~~~~~-~~~lyv 239 (358)
.+..-. .......+. -++++|+.+..+. ...++.+|..++.++.+....... . ....+.. ++++++
T Consensus 235 ~l~~~~-~~~~~~~~~spdg~l~~~~~~~~----~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~ 309 (662)
T 3azo_A 235 TLLGGP-EEAIAQAEWAPDGSLIVATDRTG----WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAV 309 (662)
T ss_dssp EEEEET-TBCEEEEEECTTSCEEEEECTTS----SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEE
T ss_pred EeCCCC-CceEcceEECCCCeEEEEECCCC----CeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEE
Confidence 332211 111122222 2667777765432 247999999888898876432211 0 1123333 677777
Q ss_pred EeCcccCCCCceeeeeEEEECCCCceEEcCCccccCCCCCceeeeeecCccCceeccccceeeceEE-EEeCCeEEEECC
Q 018336 240 VSGYKTERQGIFDESAESYQLGTGEWKRAENAWKLSQCPRSNVGVGREGKLFCWAETEAAVQFGTCR-VELGGCTLVTGS 318 (358)
Q Consensus 240 ~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~d~~~~~W~~lp~~~r~~~~~-~~~~~~i~v~gG 318 (358)
.+.. + ...++.+|..+++.+.+.... . . ...+ ...++.+++..+
T Consensus 310 ~~~~-~------~~~l~~~d~~~~~~~~l~~~~-----~--~---------------------~~~~~s~~~~~~~~~~~ 354 (662)
T 3azo_A 310 VHGK-G------AAVLGILDPESGELVDAAGPW-----T--E---------------------WAATLTVSGTRAVGVAA 354 (662)
T ss_dssp EEBS-S------SCEEEEEETTTTEEEECCSSC-----C--E---------------------EEEEEEEETTEEEEEEE
T ss_pred EEEc-C------ccEEEEEECCCCcEEEecCCC-----C--e---------------------EEEEEecCCCEEEEEEc
Confidence 7654 2 346788898888776654321 0 0 0112 334566666544
Q ss_pred CCCCCCceEEEEECCCCceEee
Q 018336 319 GYQGGPQEFYVVEGRNGKFRKF 340 (358)
Q Consensus 319 ~~~~~~~~i~~yd~~~~~W~~~ 340 (358)
.. .....+|.+|..+++.+.+
T Consensus 355 ~~-~~~~~i~~~d~~~g~~~~l 375 (662)
T 3azo_A 355 SP-RTAYEVVELDTVTGRARTI 375 (662)
T ss_dssp ET-TEEEEEEEEETTTCCEEEE
T ss_pred CC-CCCCEEEEEECCCCceEEe
Confidence 32 1115788889888887776
No 73
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=94.63 E-value=0.34 Score=42.17 Aligned_cols=106 Identities=8% Similarity=0.141 Sum_probs=60.3
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEEE--C--CEEEEEcCcCCCCCCCCeEEEEECCC
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGEL--N--GRVIIAGGHDENKTALSSAWAYDLIK 212 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~yd~~t 212 (358)
++..++.|+.+ ..+.+||....+++.+..+............ + +.+++.|+.+ ..+.+||..+
T Consensus 22 ~~~~l~~~~~d-------g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d------g~v~iwd~~~ 88 (379)
T 3jrp_A 22 YGKRLATCSSD-------KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD------GKVLIWKEEN 88 (379)
T ss_dssp SSSEEEEEETT-------SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT------SCEEEEEEET
T ss_pred CCCEEEEEECC-------CcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC------CEEEEEEcCC
Confidence 45566666533 3588888876666654433322222222222 2 5666666654 3589999999
Q ss_pred CceEecCCCccCcCceeEEEE--C--CEEEEEeCcccCCCCceeeeeEEEECCCC
Q 018336 213 DEWTELARMTQERDECEAVVI--G--SEFWVVSGYKTERQGIFDESAESYQLGTG 263 (358)
Q Consensus 213 ~~W~~~~~~p~~~~~~~~~~~--~--~~lyv~gG~~~~~~~~~~~~i~~yd~~~~ 263 (358)
+.|..+..+.........+.+ + +.++++|+.+ ..+..||..+.
T Consensus 89 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d--------~~i~v~d~~~~ 135 (379)
T 3jrp_A 89 GRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD--------GKVSVVEFKEN 135 (379)
T ss_dssp TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT--------SEEEEEECCTT
T ss_pred CceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCC--------CcEEEEecCCC
Confidence 988766544433333333333 2 5667776542 35678888766
No 74
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=94.61 E-value=0.014 Score=55.46 Aligned_cols=34 Identities=18% Similarity=0.336 Sum_probs=31.6
Q ss_pred CCCCcHHHHHHHhccC-CcchhhhHHhhcHhHHHh
Q 018336 27 VPGLPEEISLECLTRL-HYSTHRVATRVSRRWRQL 60 (358)
Q Consensus 27 ~~~Lp~d~~~~il~rl-p~~~~~~~~~v~k~w~~l 60 (358)
.+.||+|++.+||.+| |.++..+++.|||+|+.+
T Consensus 13 ~~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 13 CVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred cCCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 3579999999999999 899999999999999987
No 75
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=94.59 E-value=0.36 Score=42.38 Aligned_cols=106 Identities=13% Similarity=0.158 Sum_probs=54.0
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEE-EC-CEEEEEcCcCCCCCCCCeEEEEECCCCc
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGE-LN-GRVIIAGGHDENKTALSSAWAYDLIKDE 214 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~-~~-~~iyv~GG~~~~~~~~~~~~~yd~~t~~ 214 (358)
++..++.|+.+ ..+.+||..+.+-...-...... -.+++. .+ +.+++.++.+. .+.+||..+.+
T Consensus 150 dg~~l~sgs~d-------g~v~iwd~~~~~~~~~~~~h~~~-v~~v~~s~~~~~~~~s~~~dg------~v~~wd~~~~~ 215 (357)
T 4g56_B 150 DGTQAVSGGKD-------FSVKVWDLSQKAVLKSYNAHSSE-VNCVAACPGKDTIFLSCGEDG------RILLWDTRKPK 215 (357)
T ss_dssp SSSEEEEEETT-------SCEEEEETTTTEEEEEECCCSSC-EEEEEECTTCSSCEEEEETTS------CEEECCTTSSS
T ss_pred CCCEEEEEeCC-------CeEEEEECCCCcEEEEEcCCCCC-EEEEEEccCCCceeeeeccCC------ceEEEECCCCc
Confidence 56666776643 36889999887643321111111 112222 12 34666666443 48889988765
Q ss_pred eEecCCCccCcCceeEEEE---CCEEEEEeCcccCCCCceeeeeEEEECCCCc
Q 018336 215 WTELARMTQERDECEAVVI---GSEFWVVSGYKTERQGIFDESAESYQLGTGE 264 (358)
Q Consensus 215 W~~~~~~p~~~~~~~~~~~---~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~ 264 (358)
-...............+.+ ++.+++.|+.+ ..+..||..+.+
T Consensus 216 ~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d--------~~i~~wd~~~~~ 260 (357)
T 4g56_B 216 PATRIDFCASDTIPTSVTWHPEKDDTFACGDET--------GNVSLVNIKNPD 260 (357)
T ss_dssp CBCBCCCTTCCSCEEEEEECTTSTTEEEEEESS--------SCEEEEESSCGG
T ss_pred eeeeeeeccccccccchhhhhcccceEEEeecc--------cceeEEECCCCc
Confidence 4332222222222223333 35577776542 356788887653
No 76
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=94.52 E-value=0.67 Score=41.68 Aligned_cols=175 Identities=13% Similarity=0.112 Sum_probs=87.6
Q ss_pred EEECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEEECCEEEEEcCcCCCCCCCCeEEEEECCCC
Q 018336 134 ASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGELNGRVIIAGGHDENKTALSSAWAYDLIKD 213 (358)
Q Consensus 134 ~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~ 213 (358)
...++..++.|+.+ ..+.+||..+.+-...- ............++.+++.|+.+. .+.+||..++
T Consensus 139 ~~~d~~~l~~g~~d-------g~i~iwd~~~~~~~~~~--~~h~~~v~~l~~~~~~l~sg~~dg------~i~vwd~~~~ 203 (435)
T 1p22_A 139 LQYDDQKIVSGLRD-------NTIKIWDKNTLECKRIL--TGHTGSVLCLQYDERVIITGSSDS------TVRVWDVNTG 203 (435)
T ss_dssp EECCSSEEEEEESS-------SCEEEEESSSCCEEEEE--CCCSSCEEEEECCSSEEEEEETTS------CEEEEESSSC
T ss_pred EEECCCEEEEEeCC-------CeEEEEeCCCCeEEEEE--cCCCCcEEEEEECCCEEEEEcCCC------eEEEEECCCC
Confidence 34467777777643 36899998876643321 111111122233777777776543 4999999887
Q ss_pred ceEecCCCccCcCceeEEEECCEEEEEeCcccCCCCceeeeeEEEECCCCceEEc-CCccccCCCC--------Cceeee
Q 018336 214 EWTELARMTQERDECEAVVIGSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRA-ENAWKLSQCP--------RSNVGV 284 (358)
Q Consensus 214 ~W~~~~~~p~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~-~~~p~~~~~~--------~~~~~~ 284 (358)
.-... +.........+..++..++.|+.+ ..+..||..++.-... ..+.. .... ...+..
T Consensus 204 ~~~~~--~~~h~~~v~~l~~~~~~l~s~s~d--------g~i~vwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~l~s~ 272 (435)
T 1p22_A 204 EMLNT--LIHHCEAVLHLRFNNGMMVTCSKD--------RSIAVWDMASPTDITLRRVLVG-HRAAVNVVDFDDKYIVSA 272 (435)
T ss_dssp CEEEE--ECCCCSCEEEEECCTTEEEEEETT--------SCEEEEECSSSSCCEEEEEECC-CSSCEEEEEEETTEEEEE
T ss_pred cEEEE--EcCCCCcEEEEEEcCCEEEEeeCC--------CcEEEEeCCCCCCceeeeEecC-CCCcEEEEEeCCCEEEEE
Confidence 54321 222222233345566667776643 3567788876542111 11100 0000 000011
Q ss_pred -------eecCccCceeccccceeeceEEEEeCCeEEEECCCCCCCCceEEEEECCCCceE
Q 018336 285 -------GREGKLFCWAETEAAVQFGTCRVELGGCTLVTGSGYQGGPQEFYVVEGRNGKFR 338 (358)
Q Consensus 285 -------~~d~~~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~~~~~~i~~yd~~~~~W~ 338 (358)
.||.++.+-...-........+...++++++.|+.+ ..|.+||..+++-.
T Consensus 273 ~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~g~~d----g~i~iwd~~~~~~~ 329 (435)
T 1p22_A 273 SGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSD----NTIRLWDIECGACL 329 (435)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTEEEEEETT----SCEEEEETTTCCEE
T ss_pred eCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeCCCEEEEEeCC----CeEEEEECCCCCEE
Confidence 333333211000001123455566677777777765 77888888776543
No 77
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=94.46 E-value=1.8 Score=36.03 Aligned_cols=181 Identities=7% Similarity=0.000 Sum_probs=94.2
Q ss_pred ceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEE-CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCC-cee
Q 018336 102 YGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASS-QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDN-RSF 179 (358)
Q Consensus 102 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~-~~~ 179 (358)
..+..||+. ++...+.. +... .....++.. ++.+|+.... ...+++||+. .+..... ++.. ..-
T Consensus 83 ~~v~~~d~~-g~~~~~~~-~~~~---~~~~~i~~~~~g~l~v~~~~-------~~~i~~~~~~-g~~~~~~-~~~~~~~~ 148 (300)
T 2qc5_A 83 NKIGKLSKK-GGFTEYPL-PQPD---SGPYGITEGLNGDIWFTQLN-------GDRIGKLTAD-GTIYEYD-LPNKGSYP 148 (300)
T ss_dssp TEEEEECTT-SCEEEEEC-SSTT---CCEEEEEECSTTCEEEEETT-------TTEEEEECTT-SCEEEEE-CSSTTCCE
T ss_pred CeEEEECCC-CCeEEecC-CCCC---CCCccceECCCCCEEEEccC-------CCeEEEECCC-CCEEEcc-CCCCCCCc
Confidence 368889988 76654422 1111 112233333 6788887542 2468999987 6655432 1211 112
Q ss_pred eeeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEEE--CCEEEEEeCcccCCCCceeeeeE
Q 018336 180 FAAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVVI--GSEFWVVSGYKTERQGIFDESAE 256 (358)
Q Consensus 180 ~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~~~i~ 256 (358)
...+. -++.+|+.... ...+.+||+ +++...+. .+........+.+ +|.+|+.... ...+.
T Consensus 149 ~~i~~d~~g~l~v~~~~------~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~--------~~~i~ 212 (300)
T 2qc5_A 149 AFITLGSDNALWFTENQ------NNSIGRITN-TGKLEEYP-LPTNAAAPVGITSGNDGALWFVEIM--------GNKIG 212 (300)
T ss_dssp EEEEECTTSSEEEEETT------TTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECTTSSEEEEETT--------TTEEE
T ss_pred eeEEECCCCCEEEEecC------CCeEEEECC-CCcEEEee-CCCCCCCcceEEECCCCCEEEEccC--------CCEEE
Confidence 22333 25678886421 246899998 66666543 2222222233333 5678887532 23578
Q ss_pred EEECCCCceEEcCCccccCCCCCceeeeeecCccCceeccccceeeceEEEEeCCeEEEECCCCCCCCceEEEEECCCCc
Q 018336 257 SYQLGTGEWKRAENAWKLSQCPRSNVGVGREGKLFCWAETEAAVQFGTCRVELGGCTLVTGSGYQGGPQEFYVVEGRNGK 336 (358)
Q Consensus 257 ~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~d~~~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~~~~~~i~~yd~~~~~ 336 (358)
+||+ ++++..... +... . ....+ +..-+++||+..... +.|.+||+ +++
T Consensus 213 ~~~~-~g~~~~~~~-~~~~--~-~~~~i---------------------~~d~~g~l~v~~~~~----~~i~~~~~-~g~ 261 (300)
T 2qc5_A 213 RITT-TGEISEYDI-PTPN--A-RPHAI---------------------TAGKNSEIWFTEWGA----NQIGRITN-DNT 261 (300)
T ss_dssp EECT-TCCEEEEEC-SSTT--C-CEEEE---------------------EECSTTCEEEEETTT----TEEEEECT-TSC
T ss_pred EEcC-CCcEEEEEC-CCCC--C-CceEE---------------------EECCCCCEEEeccCC----CeEEEECC-CCc
Confidence 8988 566655421 1100 0 00111 223357788876322 57889998 456
Q ss_pred eEeecCC
Q 018336 337 FRKFDVP 343 (358)
Q Consensus 337 W~~~~~p 343 (358)
.....+|
T Consensus 262 ~~~~~~~ 268 (300)
T 2qc5_A 262 IQEYQLQ 268 (300)
T ss_dssp EEEEECC
T ss_pred EEEEECC
Confidence 6555444
No 78
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=94.44 E-value=0.73 Score=41.51 Aligned_cols=135 Identities=7% Similarity=0.035 Sum_probs=67.5
Q ss_pred eEEEEeCCCCCeeecCCCCCCCCCCCceeEEEE--ECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCce-e
Q 018336 103 GVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVAS--SQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRS-F 179 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~--~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~-~ 179 (358)
.+..||..+.+-..+........ .. .+++. .++.+++.|+.+ ..+.+||..++..+.+........ .
T Consensus 143 ~i~lWd~~~~~~~~~~~~~gH~~--~V-~~l~f~p~~~~~l~s~s~D-------~~v~iwd~~~~~~~~~~~~~~~~~~~ 212 (435)
T 4e54_B 143 DIMLWNFGIKDKPTFIKGIGAGG--SI-TGLKFNPLNTNQFYASSME-------GTTRLQDFKGNILRVFASSDTINIWF 212 (435)
T ss_dssp CEEEECSSCCSCCEEECCCSSSC--CC-CEEEECSSCTTEEEEECSS-------SCEEEEETTSCEEEEEECCSSCSCCC
T ss_pred EEEEEECCCCCceeEEEccCCCC--CE-EEEEEeCCCCCEEEEEeCC-------CEEEEeeccCCceeEEeccCCCCccE
Confidence 57888887765433322221111 11 13333 245666666643 358889998876655432221111 1
Q ss_pred eeeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEEE--CC-EEEEEeCcccCCCCceeeee
Q 018336 180 FAAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVVI--GS-EFWVVSGYKTERQGIFDESA 255 (358)
Q Consensus 180 ~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~~-~lyv~gG~~~~~~~~~~~~i 255 (358)
.+.+. -++.+++.|+.+ ..+.+||..+..-. .+.........+.+ ++ .+++.|+.+ ..+
T Consensus 213 ~~~~~~~~~~~l~~g~~d------g~i~~wd~~~~~~~---~~~~h~~~v~~v~~~p~~~~~~~s~s~d--------~~v 275 (435)
T 4e54_B 213 CSLDVSASSRMVVTGDNV------GNVILLNMDGKELW---NLRMHKKKVTHVALNPCCDWFLATASVD--------QTV 275 (435)
T ss_dssp CCEEEETTTTEEEEECSS------SBEEEEESSSCBCC---CSBCCSSCEEEEEECTTCSSEEEEEETT--------SBC
T ss_pred EEEEECCCCCEEEEEeCC------CcEeeeccCcceeE---EEecccceEEeeeecCCCceEEEEecCc--------cee
Confidence 22222 256677777654 35888998754322 22211122223333 33 366666543 245
Q ss_pred EEEECCCCc
Q 018336 256 ESYQLGTGE 264 (358)
Q Consensus 256 ~~yd~~~~~ 264 (358)
.+||..+.+
T Consensus 276 ~iwd~~~~~ 284 (435)
T 4e54_B 276 KIWDLRQVR 284 (435)
T ss_dssp CEEETTTCC
T ss_pred eEEeccccc
Confidence 678877643
No 79
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=94.44 E-value=2.2 Score=36.74 Aligned_cols=133 Identities=14% Similarity=0.015 Sum_probs=68.4
Q ss_pred ceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCC--Ccee
Q 018336 102 YGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPD--NRSF 179 (358)
Q Consensus 102 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~--~~~~ 179 (358)
..++.||+.+++...+. .+. .....+..-++.+++... ..+++||+.+.+.+.+...+. +...
T Consensus 71 ~~i~~~d~~~~~~~~~~-~~~-----~v~~i~~~~dg~l~v~~~---------~gl~~~d~~~g~~~~~~~~~~~~~~~~ 135 (326)
T 2ghs_A 71 RELHELHLASGRKTVHA-LPF-----MGSALAKISDSKQLIASD---------DGLFLRDTATGVLTLHAELESDLPGNR 135 (326)
T ss_dssp TEEEEEETTTTEEEEEE-CSS-----CEEEEEEEETTEEEEEET---------TEEEEEETTTCCEEEEECSSTTCTTEE
T ss_pred CEEEEEECCCCcEEEEE-CCC-----cceEEEEeCCCeEEEEEC---------CCEEEEECCCCcEEEEeeCCCCCCCCC
Confidence 36889999887655442 222 112222334777777642 259999999988876643321 1112
Q ss_pred eeeEE--ECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEE-ECC-EEEEEeCcccCCCCceeeee
Q 018336 180 FAAGE--LNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVV-IGS-EFWVVSGYKTERQGIFDESA 255 (358)
Q Consensus 180 ~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~-~~~-~lyv~gG~~~~~~~~~~~~i 255 (358)
..... -++.+|+.............++.|+ +++.+.+.. ........+. -++ .+|+.... ...|
T Consensus 136 ~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~--~~~~~~~i~~s~dg~~lyv~~~~--------~~~I 203 (326)
T 2ghs_A 136 SNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFA--DISIPNSICFSPDGTTGYFVDTK--------VNRL 203 (326)
T ss_dssp EEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEE--EESSEEEEEECTTSCEEEEEETT--------TCEE
T ss_pred CCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeC--CCcccCCeEEcCCCCEEEEEECC--------CCEE
Confidence 22222 2577776432111111235788888 465554421 0011112222 245 47776532 2467
Q ss_pred EEEECC
Q 018336 256 ESYQLG 261 (358)
Q Consensus 256 ~~yd~~ 261 (358)
++||..
T Consensus 204 ~~~d~~ 209 (326)
T 2ghs_A 204 MRVPLD 209 (326)
T ss_dssp EEEEBC
T ss_pred EEEEcc
Confidence 888875
No 80
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=94.39 E-value=1.6 Score=35.04 Aligned_cols=154 Identities=11% Similarity=0.094 Sum_probs=83.7
Q ss_pred eeEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEe--C----CCCCCCceeeeeEE-E--CCEEEEEcCcCCCCC
Q 018336 130 FCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTR--G----KNMPDNRSFFAAGE-L--NGRVIIAGGHDENKT 200 (358)
Q Consensus 130 ~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~--~----~~~~~~~~~~~~~~-~--~~~iyv~GG~~~~~~ 200 (358)
.-+++...+.+|++-| ..+|+++.....+.. + +.+|.. ..+|. . ++++|++-|
T Consensus 26 fDAi~~~~g~~y~Fkg---------~~~wr~~~~~~~~~p~~I~~~wp~Lp~~---iDAa~~~~~~~~iyfFkG------ 87 (207)
T 1pex_A 26 LDAITSLRGETMIFKD---------RFFWRLHPQQVDAELFLTKSFWPELPNR---IDAAYEHPSHDLIFIFRG------ 87 (207)
T ss_dssp CSEEEEETTEEEEEET---------TEEEEECSSSSCCEEEEHHHHCTTSCSS---CCEEEEETTTTEEEEEET------
T ss_pred EeEEEeCCCcEEEEEC---------CEEEEEeCCCcCCCceehhHhccCCCCC---ccEEEEeccCCcEEEEcc------
Confidence 4466678999999976 257888765433321 1 334432 22222 2 589999965
Q ss_pred CCCeEEEEECCCCc---eEecCC--CccCcCceeEE-EE--CCEEEEEeCcccCCCCceeeeeEEEECCCCceEEcCCcc
Q 018336 201 ALSSAWAYDLIKDE---WTELAR--MTQERDECEAV-VI--GSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRAENAW 272 (358)
Q Consensus 201 ~~~~~~~yd~~t~~---W~~~~~--~p~~~~~~~~~-~~--~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~~~p 272 (358)
+.+++|+..+-. =+.+.. +|.......++ .. ++++|++-|. ..++||..+++-. ..
T Consensus 88 --~~~w~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG~----------~ywr~d~~~~~~d--~g-- 151 (207)
T 1pex_A 88 --RKFWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSGN----------QVWRYDDTNHIMD--KD-- 151 (207)
T ss_dssp --TEEEEESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEETT----------EEEEEETTTTEEC--SS--
T ss_pred --CEEEEEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeCC----------EEEEEeCcCcccc--CC--
Confidence 346777643211 122222 33321122233 32 4899999764 3578988765311 11
Q ss_pred ccCCCCCceeeeeecCccCceeccccceeeceEEEEeCCeEEEECCCCCCCCceEEEEECCCCceE
Q 018336 273 KLSQCPRSNVGVGREGKLFCWAETEAAVQFGTCRVELGGCTLVTGSGYQGGPQEFYVVEGRNGKFR 338 (358)
Q Consensus 273 ~~~~~~~~~~~~~~d~~~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~~~~~~i~~yd~~~~~W~ 338 (358)
.++.. ...|..+|.. ..+ ++..++++|++-| +..|+||..+++=.
T Consensus 152 ----yPr~i--------~~~~~Gip~~--iDa-Af~~~g~~YfFkg------~~y~rf~~~~~~v~ 196 (207)
T 1pex_A 152 ----YPRLI--------EEDFPGIGDK--VDA-VYEKNGYIYFFNG------PIQFEYSIWSNRIV 196 (207)
T ss_dssp ----CCCBH--------HHHSTTSCSC--CSE-EEEETTEEEEEET------TEEEEEETTTTEEE
T ss_pred ----CCccH--------HHcCCCCCCC--ccE-EEEcCCcEEEEEC------CEEEEEeCCccEEe
Confidence 11110 1234444432 222 3346899999988 58999999887633
No 81
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=94.26 E-value=4.5 Score=39.68 Aligned_cols=142 Identities=8% Similarity=0.093 Sum_probs=79.6
Q ss_pred eEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCC-CCCCc-eee
Q 018336 103 GVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKN-MPDNR-SFF 180 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~-~~~~~-~~~ 180 (358)
.+..||+.+++...+......... .........++.|++... ..+++||+.++++..+.. .+... ...
T Consensus 108 Gl~~yd~~~~~f~~~~~~~~~~~~-~i~~i~~d~~g~lwi~t~---------~gl~~~~~~~~~~~~~~~~~~~~~~i~~ 177 (795)
T 4a2l_A 108 GLSRYDEEKDIFQNFFYEKNGKHL-QVNGIEEISPEQLLISTP---------EGLIMFDIKESKFIDDSFSTAMHKTIAS 177 (795)
T ss_dssp CEEEEETTTTEEEEECCEETTEEC-CCCEEEEEETTEEEEEET---------TEEEEEETTTTEEECSSSCHHHHTCCEE
T ss_pred chheeCCCCCeEEeccccccCCCc-eEEEEEECCCCCEEEEEC---------CceEEEECCCCEEEeccCCCCCCcceEE
Confidence 578899998888776442211100 011122334778887643 368999999988876543 11111 111
Q ss_pred eeEEECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEE-EECCEEEEEeCcccCCCCceeeeeEEEE
Q 018336 181 AAGELNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAV-VIGSEFWVVSGYKTERQGIFDESAESYQ 259 (358)
Q Consensus 181 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~-~~~~~lyv~gG~~~~~~~~~~~~i~~yd 259 (358)
.....++.+|+. ... ..+..||+.+++++.+...+.......+. --++.|++... ...+.+||
T Consensus 178 i~~d~~g~lwig-t~~------~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt~---------~~Gl~~~~ 241 (795)
T 4a2l_A 178 TLYRQGDQIYIG-TST------DGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWVATE---------GAGLFLIN 241 (795)
T ss_dssp EEEEETTEEEEE-ESS------SCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEEEEB---------SSCEEEEE
T ss_pred EEECCCCCEEEE-ECC------CCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEEEEC---------CCCeEEEe
Confidence 112237888874 211 24899999999998764332211112222 34677776431 12467899
Q ss_pred CCCCceEEcCC
Q 018336 260 LGTGEWKRAEN 270 (358)
Q Consensus 260 ~~~~~W~~~~~ 270 (358)
+.++++.....
T Consensus 242 ~~~~~~~~~~~ 252 (795)
T 4a2l_A 242 PKTKEIKNYLH 252 (795)
T ss_dssp TTTTEEEEECC
T ss_pred CCCCeEEEeec
Confidence 99998887653
No 82
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=94.23 E-value=1.5 Score=37.58 Aligned_cols=120 Identities=12% Similarity=0.014 Sum_probs=65.5
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCce
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDEW 215 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W 215 (358)
++.||+.+.. ...+++||+.+++.+.+..... ..-.+++. -++.+|+...... .....+.+||+.++..
T Consensus 55 ~g~l~~~~~~-------~~~i~~~d~~~~~~~~~~~~~~-~~~~~i~~~~dg~l~v~~~~~~--~~~~~i~~~d~~~~~~ 124 (333)
T 2dg1_A 55 QGQLFLLDVF-------EGNIFKINPETKEIKRPFVSHK-ANPAAIKIHKDGRLFVCYLGDF--KSTGGIFAATENGDNL 124 (333)
T ss_dssp TSCEEEEETT-------TCEEEEECTTTCCEEEEEECSS-SSEEEEEECTTSCEEEEECTTS--SSCCEEEEECTTSCSC
T ss_pred CCCEEEEECC-------CCEEEEEeCCCCcEEEEeeCCC-CCcceEEECCCCcEEEEeCCCC--CCCceEEEEeCCCCEE
Confidence 5778887653 2479999999988776432111 11222333 2677887753221 1124799999988876
Q ss_pred Eec-CCCccCcCceeEEE-ECCEEEEEeCcccCCCCceeeeeEEEECCCCceEEc
Q 018336 216 TEL-ARMTQERDECEAVV-IGSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRA 268 (358)
Q Consensus 216 ~~~-~~~p~~~~~~~~~~-~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~ 268 (358)
+.+ ...........++. -+|++|+........ .....++.+|+.+++...+
T Consensus 125 ~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~--~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 125 QDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYST--NPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp EEEECSSSSCCCEEEEEECTTSCEEEEECCCBTT--BCCEEEEEECTTSCCEEEE
T ss_pred EEEEccCccCCcccceEECCCCCEEEEecccccc--CCCceEEEEeCCCCEEEEe
Confidence 532 22211111112222 267788865321110 1135688899887766554
No 83
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=94.17 E-value=2.2 Score=35.80 Aligned_cols=136 Identities=8% Similarity=-0.006 Sum_probs=67.8
Q ss_pred eEEEEeCCCCC--eeecCCCCCCCCCCCceeEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCCc-EEeC-C-CCCCC-
Q 018336 103 GVTVFDPVSLT--WDRLGPVPEYPAGLPLFCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRR-WTRG-K-NMPDN- 176 (358)
Q Consensus 103 ~~~~~d~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~-W~~~-~-~~~~~- 176 (358)
.+..||+ +++ |+.-.+-.. .........++.+++..... ...++.+|+.-+. |+.- . ..+.+
T Consensus 57 ~V~~~d~-~G~~~W~~~~~~~~-----~~~~~~~~~dG~~lv~~~~~------~~~v~~vd~~Gk~l~~~~~~~~~~~~~ 124 (276)
T 3no2_A 57 GAKMITR-DGRELWNIAAPAGC-----EMQTARILPDGNALVAWCGH------PSTILEVNMKGEVLSKTEFETGIERPH 124 (276)
T ss_dssp EEEEECT-TSCEEEEEECCTTC-----EEEEEEECTTSCEEEEEEST------TEEEEEECTTSCEEEEEEECCSCSSGG
T ss_pred CEEEECC-CCCEEEEEcCCCCc-----cccccEECCCCCEEEEecCC------CCEEEEEeCCCCEEEEEeccCCCCccc
Confidence 6888999 554 654332111 11112223356666654321 2367888874432 3321 1 11111
Q ss_pred -ceeeeeEEECCEEEEEcCcCCCCCCCCeEEEEECCC-CceEecCCCccCcCceeEE-EECCEEEEEeCcccCCCCceee
Q 018336 177 -RSFFAAGELNGRVIIAGGHDENKTALSSAWAYDLIK-DEWTELARMTQERDECEAV-VIGSEFWVVSGYKTERQGIFDE 253 (358)
Q Consensus 177 -~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t-~~W~~~~~~p~~~~~~~~~-~~~~~lyv~gG~~~~~~~~~~~ 253 (358)
.........++.+++.... ...+.+||++- ..|+.-.. . ..+.+. ..+|.+++.+.. ..
T Consensus 125 ~~~~~v~~~~~G~~lv~~~~------~~~v~~~d~~G~~~w~~~~~--~--~~~~~~~~~~g~~~v~~~~--------~~ 186 (276)
T 3no2_A 125 AQFRQINKNKKGNYLVPLFA------TSEVREIAPNGQLLNSVKLS--G--TPFSSAFLDNGDCLVACGD--------AH 186 (276)
T ss_dssp GSCSCCEECTTSCEEEEETT------TTEEEEECTTSCEEEEEECS--S--CCCEEEECTTSCEEEECBT--------TS
T ss_pred ccccCceECCCCCEEEEecC------CCEEEEECCCCCEEEEEECC--C--CccceeEcCCCCEEEEeCC--------CC
Confidence 1112222345666665431 24699999972 23664322 1 112233 447788877643 23
Q ss_pred eeEEEECCCCc--eEEc
Q 018336 254 SAESYQLGTGE--WKRA 268 (358)
Q Consensus 254 ~i~~yd~~~~~--W~~~ 268 (358)
.+..||+.+++ |+.-
T Consensus 187 ~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 187 CFVQLNLESNRIVRRVN 203 (276)
T ss_dssp EEEEECTTTCCEEEEEE
T ss_pred eEEEEeCcCCcEEEEec
Confidence 58899999765 7654
No 84
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.13 E-value=2.4 Score=36.97 Aligned_cols=155 Identities=7% Similarity=-0.096 Sum_probs=78.7
Q ss_pred ceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEE-CCE-EEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCcee
Q 018336 102 YGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASS-QGK-LVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSF 179 (358)
Q Consensus 102 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~-lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~ 179 (358)
..++.+|..+++...+...+. ........- ++. |++... ... ......++++|..+..++.+.. ..+...
T Consensus 168 ~~l~~~d~~~g~~~~~~~~~~-----~~~~~~~sp~dg~~l~~~~~-~~~-~~~~~~l~~~d~~~~~~~~l~~-~~~~~~ 239 (396)
T 3c5m_A 168 CRLIKVDIETGELEVIHQDTA-----WLGHPIYRPFDDSTVGFCHE-GPH-DLVDARMWLVNEDGSNVRKIKE-HAEGES 239 (396)
T ss_dssp EEEEEEETTTCCEEEEEEESS-----CEEEEEEETTEEEEEEEEEC-SCS-SSCSCCCEEEETTSCCCEESSC-CCTTEE
T ss_pred ceEEEEECCCCcEEeeccCCc-----ccccceECCCCCCEEEEEec-CCC-CCCCceEEEEECCCCceeEeec-cCCCcc
Confidence 468889998888766643211 111122222 233 444432 111 0112579999998888777655 221211
Q ss_pred ee-eEE-ECCE-EEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEEE-CCEEEEEeCcccC---C-----
Q 018336 180 FA-AGE-LNGR-VIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVVI-GSEFWVVSGYKTE---R----- 247 (358)
Q Consensus 180 ~~-~~~-~~~~-iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~-~~~lyv~gG~~~~---~----- 247 (358)
.. .+. -+++ |++...... .....++++|+.++..+.+...+.. . ....- +|+++++++.... .
T Consensus 240 ~~~~~~spdg~~l~~~~~~~~--~~~~~l~~~d~~~g~~~~l~~~~~~--~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~ 314 (396)
T 3c5m_A 240 CTHEFWIPDGSAMAYVSYFKG--QTDRVIYKANPETLENEEVMVMPPC--S-HLMSNFDGSLMVGDGCDAPVDVADADSY 314 (396)
T ss_dssp EEEEEECTTSSCEEEEEEETT--TCCEEEEEECTTTCCEEEEEECCSE--E-EEEECSSSSEEEEEECCC----------
T ss_pred ccceEECCCCCEEEEEecCCC--CccceEEEEECCCCCeEEeeeCCCC--C-CCccCCCCceEEEecCCcceeecccccc
Confidence 21 222 2444 544432111 1123499999998887766544421 1 22233 7887766542100 0
Q ss_pred CCceeeeeEEEECCCCceEEcC
Q 018336 248 QGIFDESAESYQLGTGEWKRAE 269 (358)
Q Consensus 248 ~~~~~~~i~~yd~~~~~W~~~~ 269 (358)
.......++.+|+.+++...+.
T Consensus 315 ~~~~~~~i~~~d~~~~~~~~l~ 336 (396)
T 3c5m_A 315 NIENDPFLYVLNTKAKSAQKLC 336 (396)
T ss_dssp CCCCCCEEEEEETTTTBCCEEE
T ss_pred ccCCCCcEEEEecccCceEEcc
Confidence 0001346889999888765544
No 85
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=94.12 E-value=0.58 Score=40.66 Aligned_cols=107 Identities=10% Similarity=0.193 Sum_probs=59.0
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCcee-eeeEEE-CCEEEEEcCcCCCCCCCCeEEEEECCCCc
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSF-FAAGEL-NGRVIIAGGHDENKTALSSAWAYDLIKDE 214 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~ 214 (358)
++.+++.|+. ...+.+||..+.+++.+..+...... .+++.. ++..++.|+.+ ..+.+||..++.
T Consensus 19 ~~~~l~~~~~-------d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d------g~i~vwd~~~~~ 85 (372)
T 1k8k_C 19 DRTQIAICPN-------NHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD------RNAYVWTLKGRT 85 (372)
T ss_dssp TSSEEEEECS-------SSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETT------SCEEEEEEETTE
T ss_pred CCCEEEEEeC-------CCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCC------CeEEEEECCCCe
Confidence 5566666654 24799999998876555433322211 222222 56666666543 358999998887
Q ss_pred eEecCCCccCcCceeEEEE--CCEEEEEeCcccCCCCceeeeeEEEECCCCc
Q 018336 215 WTELARMTQERDECEAVVI--GSEFWVVSGYKTERQGIFDESAESYQLGTGE 264 (358)
Q Consensus 215 W~~~~~~p~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~ 264 (358)
+.....+.........+.+ +++++++|+.+ ..+..||..+..
T Consensus 86 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------~~v~i~d~~~~~ 129 (372)
T 1k8k_C 86 WKPTLVILRINRAARCVRWAPNEKKFAVGSGS--------RVISICYFEQEN 129 (372)
T ss_dssp EEEEEECCCCSSCEEEEEECTTSSEEEEEETT--------SSEEEEEEETTT
T ss_pred eeeeEEeecCCCceeEEEECCCCCEEEEEeCC--------CEEEEEEecCCC
Confidence 7654332222222222322 56677776543 245667766543
No 86
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=94.06 E-value=2.5 Score=36.13 Aligned_cols=137 Identities=9% Similarity=0.004 Sum_probs=72.6
Q ss_pred ceEEEEeCCCCCeeecCC-CCCCCCCCCceeEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCC--CCce
Q 018336 102 YGVTVFDPVSLTWDRLGP-VPEYPAGLPLFCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMP--DNRS 178 (358)
Q Consensus 102 ~~~~~~d~~~~~W~~~~~-~~~~~~~~~~~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~--~~~~ 178 (358)
..+..+|+.+.+-....+ ..... .......-++.+|+... ...+.+||..+.+-......+ .+..
T Consensus 164 ~~i~~~d~~~~~~~~~~~~~~~~~----~~~~~s~dg~~l~~~~~--------~~~i~~~d~~~~~~~~~~~~~~~~~~~ 231 (353)
T 3vgz_A 164 SVIWVVDGGNIKLKTAIQNTGKMS----TGLALDSEGKRLYTTNA--------DGELITIDTADNKILSRKKLLDDGKEH 231 (353)
T ss_dssp CEEEEEETTTTEEEEEECCCCTTC----CCCEEETTTTEEEEECT--------TSEEEEEETTTTEEEEEEECCCSSSCC
T ss_pred ceEEEEcCCCCceEEEecCCCCcc----ceEEECCCCCEEEEEcC--------CCeEEEEECCCCeEEEEEEcCCCCCCc
Confidence 358889998776433322 11111 11122223456777654 247889999887644321211 1122
Q ss_pred ee-eeEEE--CCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEEECCE-EEEEeCcccCCCCceeee
Q 018336 179 FF-AAGEL--NGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVVIGSE-FWVVSGYKTERQGIFDES 254 (358)
Q Consensus 179 ~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~~~~-lyv~gG~~~~~~~~~~~~ 254 (358)
.. +.+.. ++.+|+.... ...+.+||+.+++....-..+.+. .....-+++ +|+.... ...
T Consensus 232 ~~~~~~~s~dg~~l~~~~~~------~~~v~~~d~~~~~~~~~~~~~~~~--~~~~s~dg~~l~v~~~~--------~~~ 295 (353)
T 3vgz_A 232 FFINISLDTARQRAFITDSK------AAEVLVVDTRNGNILAKVAAPESL--AVLFNPARNEAYVTHRQ--------AGK 295 (353)
T ss_dssp CEEEEEEETTTTEEEEEESS------SSEEEEEETTTCCEEEEEECSSCC--CEEEETTTTEEEEEETT--------TTE
T ss_pred ccceEEECCCCCEEEEEeCC------CCEEEEEECCCCcEEEEEEcCCCc--eEEECCCCCEEEEEECC--------CCe
Confidence 22 22332 4567776421 257999999887765433333321 122233444 7777643 236
Q ss_pred eEEEECCCCceE
Q 018336 255 AESYQLGTGEWK 266 (358)
Q Consensus 255 i~~yd~~~~~W~ 266 (358)
+.+||..+++..
T Consensus 296 v~~~d~~~~~~~ 307 (353)
T 3vgz_A 296 VSVIDAKSYKVV 307 (353)
T ss_dssp EEEEETTTTEEE
T ss_pred EEEEECCCCeEE
Confidence 788999887644
No 87
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=93.96 E-value=1.4 Score=38.15 Aligned_cols=146 Identities=12% Similarity=0.284 Sum_probs=72.6
Q ss_pred eEEEEeCCCCCeeecCCCCCCCCCCCceeEEEE-ECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceee-
Q 018336 103 GVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVAS-SQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFF- 180 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~- 180 (358)
.+..||..+++|.....+...... .. .+++. -++..++.|+.+ ..+.+||..+..+..+..+.......
T Consensus 39 ~i~iw~~~~~~~~~~~~~~~~h~~-~v-~~~~~sp~g~~l~s~s~D-------~~v~iw~~~~~~~~~~~~~~~h~~~v~ 109 (345)
T 3fm0_A 39 RIRIWGTEGDSWICKSVLSEGHQR-TV-RKVAWSPCGNYLASASFD-------ATTCIWKKNQDDFECVTTLEGHENEVK 109 (345)
T ss_dssp CEEEEEEETTEEEEEEEECSSCSS-CE-EEEEECTTSSEEEEEETT-------SCEEEEEECCC-EEEEEEECCCSSCEE
T ss_pred eEEEEEcCCCcceeeeeeccccCC-cE-EEEEECCCCCEEEEEECC-------CcEEEEEccCCCeEEEEEccCCCCCce
Confidence 577788887776533222111111 11 12222 256666677643 35778888777665443332221111
Q ss_pred eeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCC-ceEecCCCccCcCceeEEEE--CCEEEEEeCcccCCCCceeeeeE
Q 018336 181 AAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKD-EWTELARMTQERDECEAVVI--GSEFWVVSGYKTERQGIFDESAE 256 (358)
Q Consensus 181 ~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~-~W~~~~~~p~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~~~i~ 256 (358)
+++. -++.+++.|+.+. .+.+||..+. .+..+..+.........+.+ ++++++.|+.+ ..+.
T Consensus 110 ~v~~sp~~~~l~s~s~D~------~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d--------~~i~ 175 (345)
T 3fm0_A 110 SVAWAPSGNLLATCSRDK------SVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYD--------DTVK 175 (345)
T ss_dssp EEEECTTSSEEEEEETTS------CEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETT--------SCEE
T ss_pred EEEEeCCCCEEEEEECCC------eEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCC--------CcEE
Confidence 2222 2566777776543 4888888654 23322222211111222222 56666666543 2467
Q ss_pred EEECCCCceEEcCCc
Q 018336 257 SYQLGTGEWKRAENA 271 (358)
Q Consensus 257 ~yd~~~~~W~~~~~~ 271 (358)
.||..++.|..+..+
T Consensus 176 ~w~~~~~~~~~~~~~ 190 (345)
T 3fm0_A 176 LYREEEDDWVCCATL 190 (345)
T ss_dssp EEEEETTEEEEEEEE
T ss_pred EEEecCCCEEEEEEe
Confidence 788888877655443
No 88
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=93.91 E-value=0.22 Score=43.72 Aligned_cols=138 Identities=9% Similarity=0.097 Sum_probs=63.3
Q ss_pred eEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEE-CCEEEEEcCcCCCCCCCcceeEEEECCCCc-EEeCCCCCCCceee
Q 018336 103 GVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASS-QGKLVVMGGWDPASYSPVSHVFVYDFTTRR-WTRGKNMPDNRSFF 180 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~-W~~~~~~~~~~~~~ 180 (358)
.+..||..++.|..+..+..... .. .+++.. ++.+++.|+.+ ..+.+||..+.. |.....+.......
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~h~~--~v-~~~~~s~~~~~l~s~s~d-------~~v~vwd~~~~~~~~~~~~~~~~~~~v 103 (377)
T 3dwl_C 34 QVELYEQDGNGWKHARTFSDHDK--IV-TCVDWAPKSNRIVTCSQD-------RNAYVYEKRPDGTWKQTLVLLRLNRAA 103 (377)
T ss_dssp CBCEEEEETTEEEECCCBCCCSS--CE-EEEEECTTTCCEEEEETT-------SSEEEC------CCCCEEECCCCSSCE
T ss_pred EEEEEEccCCceEEEEEEecCCc--eE-EEEEEeCCCCEEEEEeCC-------CeEEEEEcCCCCceeeeeEecccCCce
Confidence 46678888887777666554221 11 122222 45666666643 368899988876 43322221111111
Q ss_pred eeEEE--CCEEEEEcCcCCCCCCCCeEEEEECCCCc-eEecCCCcc-CcCceeEEEE--CCEEEEEeCcccCCCCceeee
Q 018336 181 AAGEL--NGRVIIAGGHDENKTALSSAWAYDLIKDE-WTELARMTQ-ERDECEAVVI--GSEFWVVSGYKTERQGIFDES 254 (358)
Q Consensus 181 ~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~-W~~~~~~p~-~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~~~ 254 (358)
..+.. ++..++.|+.+ ..+.+||..++. |.....+.. .......+.+ ++++++.|+.+ ..
T Consensus 104 ~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d--------~~ 169 (377)
T 3dwl_C 104 TFVRWSPNEDKFAVGSGA------RVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCAD--------RK 169 (377)
T ss_dssp EEEECCTTSSCCEEEESS------SCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESS--------SC
T ss_pred EEEEECCCCCEEEEEecC------CeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCC--------CE
Confidence 11222 45566666543 348888887664 433333322 1111222222 56677777653 24
Q ss_pred eEEEECCCCc
Q 018336 255 AESYQLGTGE 264 (358)
Q Consensus 255 i~~yd~~~~~ 264 (358)
+..||..+..
T Consensus 170 i~iwd~~~~~ 179 (377)
T 3dwl_C 170 AYVLSAYVRD 179 (377)
T ss_dssp EEEEEECCSS
T ss_pred EEEEEEEecc
Confidence 6778876543
No 89
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=93.87 E-value=0.18 Score=44.30 Aligned_cols=107 Identities=13% Similarity=0.222 Sum_probs=53.5
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEEE--CCEEEEEcCcCCCCCCCCeEEEEECCCCc
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGEL--NGRVIIAGGHDENKTALSSAWAYDLIKDE 214 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~ 214 (358)
++.+++.|+.+ ..+.+||..++.|+.+..+............ ++..++.|+.+ ..+.+||..++.
T Consensus 22 ~g~~l~~~~~d-------~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d------~~v~vwd~~~~~ 88 (377)
T 3dwl_C 22 QRTEFVTTTAT-------NQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD------RNAYVYEKRPDG 88 (377)
T ss_dssp SSSEEECCCSS-------SCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT------SSEEEC------
T ss_pred CCCEEEEecCC-------CEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC------CeEEEEEcCCCC
Confidence 55666666543 3688899998888777666543322222222 45666666644 348899998876
Q ss_pred -eEecCCCccCcCceeEEEE--CCEEEEEeCcccCCCCceeeeeEEEECCCCc
Q 018336 215 -WTELARMTQERDECEAVVI--GSEFWVVSGYKTERQGIFDESAESYQLGTGE 264 (358)
Q Consensus 215 -W~~~~~~p~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~ 264 (358)
|.....+.........+.+ ++++++.|+.+ ..+..||..+++
T Consensus 89 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------~~i~iwd~~~~~ 133 (377)
T 3dwl_C 89 TWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGA--------RVISVCYFEQEN 133 (377)
T ss_dssp CCCCEEECCCCSSCEEEEECCTTSSCCEEEESS--------SCEEECCC----
T ss_pred ceeeeeEecccCCceEEEEECCCCCEEEEEecC--------CeEEEEEECCcc
Confidence 5443322222222222222 56666666542 246778887664
No 90
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=93.85 E-value=2.1 Score=37.85 Aligned_cols=149 Identities=12% Similarity=0.108 Sum_probs=75.4
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEe-CCCCCCCceeeeeEEE--CCEEEEEcCcCCCCCCCCeEEEEECCCC
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTR-GKNMPDNRSFFAAGEL--NGRVIIAGGHDENKTALSSAWAYDLIKD 213 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~-~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~ 213 (358)
++.+++.|+.+ ..+.+||..+.+-.. +.....+. .+++.. +..+++.||-.. -..+.+||..++
T Consensus 228 ~~~~l~s~~~d-------~~v~iwd~~~~~~~~~~~~~~~~v--~~~~~~p~~~~ll~~~~gs~----d~~i~i~d~~~~ 294 (401)
T 4aez_A 228 DGLQLASGGND-------NVVQIWDARSSIPKFTKTNHNAAV--KAVAWCPWQSNLLATGGGTM----DKQIHFWNAATG 294 (401)
T ss_dssp TSSEEEEEETT-------SCEEEEETTCSSEEEEECCCSSCC--CEEEECTTSTTEEEEECCTT----TCEEEEEETTTC
T ss_pred CCCEEEEEeCC-------CeEEEccCCCCCccEEecCCcceE--EEEEECCCCCCEEEEecCCC----CCEEEEEECCCC
Confidence 55666666643 368999988754322 22111111 122222 446777764221 146999999876
Q ss_pred ceEecCCCccCcCceeEEEE--CCEEEEE-eCcccCCCCceeeeeEEEECCCCceEEcCCccccCCCCCceeeeeecCcc
Q 018336 214 EWTELARMTQERDECEAVVI--GSEFWVV-SGYKTERQGIFDESAESYQLGTGEWKRAENAWKLSQCPRSNVGVGREGKL 290 (358)
Q Consensus 214 ~W~~~~~~p~~~~~~~~~~~--~~~lyv~-gG~~~~~~~~~~~~i~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~d~~~ 290 (358)
.-...-... . ....+.+ +++.++. +|.. ...+.+||..++.......+.... ..
T Consensus 295 ~~~~~~~~~--~-~v~~~~~s~~~~~l~~~~g~~-------dg~i~v~~~~~~~~~~~~~~~~h~--~~----------- 351 (401)
T 4aez_A 295 ARVNTVDAG--S-QVTSLIWSPHSKEIMSTHGFP-------DNNLSIWSYSSSGLTKQVDIPAHD--TR----------- 351 (401)
T ss_dssp CEEEEEECS--S-CEEEEEECSSSSEEEEEECTT-------TCEEEEEEEETTEEEEEEEEECCS--SC-----------
T ss_pred CEEEEEeCC--C-cEEEEEECCCCCeEEEEeecC-------CCcEEEEecCCccceeEEEecCCC--CC-----------
Confidence 543322111 1 1122222 4444444 3432 236788888887666554432110 00
Q ss_pred CceeccccceeeceEEEEeCCeEEEECCCCCCCCceEEEEECCCCc
Q 018336 291 FCWAETEAAVQFGTCRVELGGCTLVTGSGYQGGPQEFYVVEGRNGK 336 (358)
Q Consensus 291 ~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~~~~~~i~~yd~~~~~ 336 (358)
........+++.++.|+.+ ..|.+||..+++
T Consensus 352 -----------v~~~~~s~dg~~l~s~~~d----g~i~iw~~~~~~ 382 (401)
T 4aez_A 352 -----------VLYSALSPDGRILSTAASD----ENLKFWRVYDGD 382 (401)
T ss_dssp -----------CCEEEECTTSSEEEEECTT----SEEEEEECCC--
T ss_pred -----------EEEEEECCCCCEEEEEeCC----CcEEEEECCCCc
Confidence 0111233467777777764 578889988765
No 91
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=93.84 E-value=2.4 Score=36.07 Aligned_cols=160 Identities=10% Similarity=0.063 Sum_probs=77.8
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCC-CcEEeCC----CCCCCceeeeeEE-EC-CEEEEEcCcCCCCCCCCeEEEEE
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTT-RRWTRGK----NMPDNRSFFAAGE-LN-GRVIIAGGHDENKTALSSAWAYD 209 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t-~~W~~~~----~~~~~~~~~~~~~-~~-~~iyv~GG~~~~~~~~~~~~~yd 209 (358)
+..+|+.+.. ...+.+||..+ .+...+. ..+....-..++. -+ ..+|+.+.. ...+.+|+
T Consensus 140 g~~l~~~~~~-------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~------~~~i~~~~ 206 (343)
T 1ri6_A 140 NRTLWVPALK-------QDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNEL------NSSVDVWE 206 (343)
T ss_dssp SSEEEEEEGG-------GTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETT------TTEEEEEE
T ss_pred CCEEEEecCC-------CCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCC------CCEEEEEE
Confidence 3467776522 34799999987 6654322 1111111112222 23 457777532 24688888
Q ss_pred CC--CCceEec---CCCccC---cCceeEEEE--CC-EEEEEeCcccCCCCceeeeeEEEECC--CCceEEcCCccccCC
Q 018336 210 LI--KDEWTEL---ARMTQE---RDECEAVVI--GS-EFWVVSGYKTERQGIFDESAESYQLG--TGEWKRAENAWKLSQ 276 (358)
Q Consensus 210 ~~--t~~W~~~---~~~p~~---~~~~~~~~~--~~-~lyv~gG~~~~~~~~~~~~i~~yd~~--~~~W~~~~~~p~~~~ 276 (358)
.. ++.++.. ..++.. ......+.+ ++ .||+.+.. ...+.+||.. +++++.+...+...
T Consensus 207 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~--------~~~i~v~d~~~~~~~~~~~~~~~~~~- 277 (343)
T 1ri6_A 207 LKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRT--------ASLITVFSVSEDGSVLSKEGFQPTET- 277 (343)
T ss_dssp SSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETT--------TTEEEEEEECTTSCCEEEEEEEECSS-
T ss_pred ecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecC--------CCEEEEEEEcCCCCceEEeeeecCCC-
Confidence 84 4555432 223322 111222333 34 46665532 2356778877 56677665543221
Q ss_pred CCCceeeeeecCccCceeccccceeeceEEEEeCCe-EEEECCCCCCCCceEEEEECCCCceEee-cCCC
Q 018336 277 CPRSNVGVGREGKLFCWAETEAAVQFGTCRVELGGC-TLVTGSGYQGGPQEFYVVEGRNGKFRKF-DVPA 344 (358)
Q Consensus 277 ~~~~~~~~~~d~~~~~W~~lp~~~r~~~~~~~~~~~-i~v~gG~~~~~~~~i~~yd~~~~~W~~~-~~p~ 344 (358)
.+.. + ...-+++ ||+.++.. + .-.+|.+|+.+++++.+ .++.
T Consensus 278 ~~~~---~---------------------~~s~dg~~l~~~~~~~-~-~v~v~~~d~~~g~~~~~~~~~~ 321 (343)
T 1ri6_A 278 QPRG---F---------------------NVDHSGKYLIAAGQKS-H-HISVYEIVGEQGLLHEKGRYAV 321 (343)
T ss_dssp SCCC---E---------------------EECTTSSEEEEECTTT-C-EEEEEEEETTTTEEEEEEEEEC
T ss_pred ccce---E---------------------EECCCCCEEEEecCCC-C-eEEEEEEcCCCceeeEcccccc
Confidence 1111 1 1223444 65555332 1 12344558888889888 4443
No 92
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=93.80 E-value=2.7 Score=35.48 Aligned_cols=179 Identities=15% Similarity=0.163 Sum_probs=86.1
Q ss_pred eEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEe-CCCCCCCceeee
Q 018336 103 GVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTR-GKNMPDNRSFFA 181 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~-~~~~~~~~~~~~ 181 (358)
.+..||..+++-...- ..... ........-++.+++.|+.+ ..+.+||..+.+-.. +..-..+. .+
T Consensus 88 ~i~vwd~~~~~~~~~~--~~~~~--~v~~~~~~~~~~~l~s~~~d-------~~i~iwd~~~~~~~~~~~~~~~~v--~~ 154 (312)
T 4ery_A 88 TLKIWDVSSGKCLKTL--KGHSN--YVFCCNFNPQSNLIVSGSFD-------ESVRIWDVKTGKCLKTLPAHSDPV--SA 154 (312)
T ss_dssp EEEEEETTTCCEEEEE--ECCSS--CEEEEEECSSSSEEEEEETT-------SCEEEEETTTCCEEEEECCCSSCE--EE
T ss_pred EEEEEECCCCcEEEEE--cCCCC--CEEEEEEcCCCCEEEEEeCC-------CcEEEEECCCCEEEEEecCCCCcE--EE
Confidence 6788888776533221 11110 11111112245566666643 368999998765432 22111111 11
Q ss_pred eEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEE--EECCEEEEEeCcccCCCCceeeeeEEE
Q 018336 182 AGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAV--VIGSEFWVVSGYKTERQGIFDESAESY 258 (358)
Q Consensus 182 ~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~--~~~~~lyv~gG~~~~~~~~~~~~i~~y 258 (358)
.+. .++.+++.|+.+ ..+.+||..+..-...-..... .....+ .-+++.++.|+.+ ..+..|
T Consensus 155 ~~~~~~~~~l~~~~~d------~~i~~wd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d--------~~i~iw 219 (312)
T 4ery_A 155 VHFNRDGSLIVSSSYD------GLCRIWDTASGQCLKTLIDDDN-PPVSFVKFSPNGKYILAATLD--------NTLKLW 219 (312)
T ss_dssp EEECTTSSEEEEEETT------SCEEEEETTTCCEEEEECCSSC-CCEEEEEECTTSSEEEEEETT--------TEEEEE
T ss_pred EEEcCCCCEEEEEeCC------CcEEEEECCCCceeeEEeccCC-CceEEEEECCCCCEEEEEcCC--------CeEEEE
Confidence 111 256666776654 3489999987654321111111 111122 2356666666542 357889
Q ss_pred ECCCCceEEcCCccccCCCCCceeeeeecCccCceeccccceeeceEEEEeCCeEEEECCCCCCCCceEEEEECCCCc
Q 018336 259 QLGTGEWKRAENAWKLSQCPRSNVGVGREGKLFCWAETEAAVQFGTCRVELGGCTLVTGSGYQGGPQEFYVVEGRNGK 336 (358)
Q Consensus 259 d~~~~~W~~~~~~p~~~~~~~~~~~~~~d~~~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~~~~~~i~~yd~~~~~ 336 (358)
|..+.+-...-... . ...... .......++++++.|+.+ ..|.+||..+++
T Consensus 220 d~~~~~~~~~~~~~--~-~~~~~~--------------------~~~~~~~~~~~l~sg~~d----g~i~vwd~~~~~ 270 (312)
T 4ery_A 220 DYSKGKCLKTYTGH--K-NEKYCI--------------------FANFSVTGGKWIVSGSED----NLVYIWNLQTKE 270 (312)
T ss_dssp ETTTTEEEEEECSS--C-CSSSCC--------------------CEEEECSSSCEEEECCTT----SCEEEEETTTCC
T ss_pred ECCCCcEEEEEEec--C-CceEEE--------------------EEEEEeCCCcEEEEECCC----CEEEEEECCCch
Confidence 98876432211100 0 000000 011223456777777765 578889988765
No 93
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=93.79 E-value=1.3 Score=43.36 Aligned_cols=95 Identities=12% Similarity=0.274 Sum_probs=53.7
Q ss_pred eEEEEeCCCCCeeecCCCCCCCCCCCceeEEEE-EC--CEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCcee
Q 018336 103 GVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVAS-SQ--GKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSF 179 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~--~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~ 179 (358)
.+..||....++..+..+..... .. .+++. .+ +.+++.|+.+ ..+.+||..+++|..+..+......
T Consensus 32 ~I~vwd~~~~~~~~~~~l~~h~~--~V-~~l~~s~~~~~~~l~s~s~D-------g~I~vwd~~~~~~~~~~~~~~h~~~ 101 (753)
T 3jro_A 32 TIKIFEVEGETHKLIDTLTGHEG--PV-WRVDWAHPKFGTILASCSYD-------GKVLIWKEENGRWSQIAVHAVHSAS 101 (753)
T ss_dssp EEEEEEEETTEEEEEEEECCCSS--CE-EEEEECCTTSCSEEEEEETT-------SCEEEEEEETTEEEEEEEECCCSSC
T ss_pred cEEEEecCCCCCccceeccCCcC--ce-EEEEecCCCCCCEEEEEeCC-------CeEEEEECCCCcccccccccCCCCC
Confidence 67788887666665544433211 11 12332 23 5666777643 3689999999887665443322222
Q ss_pred eeeEEE--C--CEEEEEcCcCCCCCCCCeEEEEECCCC
Q 018336 180 FAAGEL--N--GRVIIAGGHDENKTALSSAWAYDLIKD 213 (358)
Q Consensus 180 ~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~yd~~t~ 213 (358)
...+.. + +.+++.|+.+ ..+.+||..++
T Consensus 102 V~~v~~sp~~~~~~l~sgs~d------g~I~vwdl~~~ 133 (753)
T 3jro_A 102 VNSVQWAPHEYGPLLLVASSD------GKVSVVEFKEN 133 (753)
T ss_dssp EEEEEECCGGGCSEEEEEETT------SEEEEEECCSS
T ss_pred eEEEEECCCCCCCEEEEEeCC------CcEEEEEeecC
Confidence 222222 3 5667776644 35889998766
No 94
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=93.77 E-value=1 Score=39.25 Aligned_cols=105 Identities=11% Similarity=0.071 Sum_probs=52.4
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCcee-eeeEE-E-CCEEEEEcCcCCCCCCCCeEEEEECCCC
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSF-FAAGE-L-NGRVIIAGGHDENKTALSSAWAYDLIKD 213 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~-~~~~~-~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~ 213 (358)
++..++.|+.+ ..+.+||..+++-... +...... .+.+. . +..+++.|+.+. .+.+||..+.
T Consensus 138 dg~~l~sgs~d-------~~i~iwd~~~~~~~~~--~~~h~~~V~~~~~~~~~~~~l~s~s~D~------~v~iwd~~~~ 202 (344)
T 4gqb_B 138 SGTQAVSGSKD-------ICIKVWDLAQQVVLSS--YRAHAAQVTCVAASPHKDSVFLSCSEDN------RILLWDTRCP 202 (344)
T ss_dssp TSSEEEEEETT-------SCEEEEETTTTEEEEE--ECCCSSCEEEEEECSSCTTEEEEEETTS------CEEEEETTSS
T ss_pred CCCEEEEEeCC-------CeEEEEECCCCcEEEE--EcCcCCceEEEEecCCCCCceeeecccc------cccccccccc
Confidence 56666666643 3688999988654321 1111111 11222 2 335677766543 4889999876
Q ss_pred ceEecCCCccCcCceeEEEE---CCEEEEEeCcccCCCCceeeeeEEEECCCCc
Q 018336 214 EWTELARMTQERDECEAVVI---GSEFWVVSGYKTERQGIFDESAESYQLGTGE 264 (358)
Q Consensus 214 ~W~~~~~~p~~~~~~~~~~~---~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~ 264 (358)
+-...-...........+.+ ++++++.|+.+ ..|..||..+++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~d--------g~v~~wd~~~~~ 248 (344)
T 4gqb_B 203 KPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDEN--------GTVSLVDTKSTS 248 (344)
T ss_dssp SCEEECC----CCCEEEEEECSSCTTEEEEEETT--------SEEEEEESCC--
T ss_pred ceeeeeecceeeccceeeeecCCCCcceEEeccC--------CcEEEEECCCCc
Confidence 54322111111111122222 45677777543 356788887653
No 95
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=93.60 E-value=1.3 Score=38.46 Aligned_cols=155 Identities=10% Similarity=0.147 Sum_probs=78.7
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCC--ceeeeeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCC
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDN--RSFFAAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKD 213 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~--~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~ 213 (358)
++.+++.|+.+ ..+.+||..+++|.....+... ..-.+++. -++..++.|+.+. .+.++|..++
T Consensus 27 ~g~~las~~~D-------~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~------~v~iw~~~~~ 93 (345)
T 3fm0_A 27 AGTLLASCGGD-------RRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA------TTCIWKKNQD 93 (345)
T ss_dssp TSSCEEEEETT-------SCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS------CEEEEEECCC
T ss_pred CCCEEEEEcCC-------CeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC------cEEEEEccCC
Confidence 45566666643 3588888888877532211111 11112222 2566667766543 4778888777
Q ss_pred ceEecCCCccCcCceeEEEE--CCEEEEEeCcccCCCCceeeeeEEEECCCC-ceEEcCCccccCCCCCceeeeeecCcc
Q 018336 214 EWTELARMTQERDECEAVVI--GSEFWVVSGYKTERQGIFDESAESYQLGTG-EWKRAENAWKLSQCPRSNVGVGREGKL 290 (358)
Q Consensus 214 ~W~~~~~~p~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~-~W~~~~~~p~~~~~~~~~~~~~~d~~~ 290 (358)
.++.+..+.........+.+ ++++++.|+.+ ..+..||..+. .+..+..+.. ....+
T Consensus 94 ~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D--------~~v~iwd~~~~~~~~~~~~~~~----h~~~v-------- 153 (345)
T 3fm0_A 94 DFECVTTLEGHENEVKSVAWAPSGNLLATCSRD--------KSVWVWEVDEEDEYECVSVLNS----HTQDV-------- 153 (345)
T ss_dssp -EEEEEEECCCSSCEEEEEECTTSSEEEEEETT--------SCEEEEEECTTSCEEEEEEECC----CCSCE--------
T ss_pred CeEEEEEccCCCCCceEEEEeCCCCEEEEEECC--------CeEEEEECCCCCCeEEEEEecC----cCCCe--------
Confidence 66544433322222222322 56777777653 24677887654 3333322210 00000
Q ss_pred CceeccccceeeceEEEEeCCeEEEECCCCCCCCceEEEEECCCCceEee
Q 018336 291 FCWAETEAAVQFGTCRVELGGCTLVTGSGYQGGPQEFYVVEGRNGKFRKF 340 (358)
Q Consensus 291 ~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~~~~~~i~~yd~~~~~W~~~ 340 (358)
......-++++++.|+.+ ..+.+||..+++|..+
T Consensus 154 ------------~~~~~~p~~~~l~s~s~d----~~i~~w~~~~~~~~~~ 187 (345)
T 3fm0_A 154 ------------KHVVWHPSQELLASASYD----DTVKLYREEEDDWVCC 187 (345)
T ss_dssp ------------EEEEECSSSSCEEEEETT----SCEEEEEEETTEEEEE
T ss_pred ------------EEEEECCCCCEEEEEeCC----CcEEEEEecCCCEEEE
Confidence 011122356666666654 4677777777777644
No 96
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=93.60 E-value=3 Score=40.07 Aligned_cols=152 Identities=13% Similarity=0.043 Sum_probs=76.3
Q ss_pred ceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEE-ECCE-EEEEcCcCCCCCCCcceeEEEECCCC-cEEeCCCCCCCc-
Q 018336 102 YGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVAS-SQGK-LVVMGGWDPASYSPVSHVFVYDFTTR-RWTRGKNMPDNR- 177 (358)
Q Consensus 102 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~-lyv~Gg~~~~~~~~~~~~~~yd~~t~-~W~~~~~~~~~~- 177 (358)
..++.+|..+++-..+....... .....++. -++. |++.. .+... ....++++|..+. ..+.+.......
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~~---~~~~~~~~spdg~~l~~~~-~~~~~--~~~~v~~~d~~~g~~~~~~~~~~~~~~ 308 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPKE---KFLTNLSWSPDENILYVAE-VNRAQ--NECKVNAYDAETGRFVRTLFVETDKHY 308 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCTT---CEEEEEEECTTSSEEEEEE-ECTTS--CEEEEEEEETTTCCEEEEEEEEECSSC
T ss_pred eEEEEEECCCCceEeeccCCCCc---eeEeeEEEECCCCEEEEEE-eCCCC--CeeEEEEEECCCCceeeEEEEccCCCe
Confidence 56888999888765554321111 11112222 2454 44433 22211 2458999999988 665543111110
Q ss_pred e--eeeeEE-E--CCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEEE--CC-EEEEEeCcccCCCC
Q 018336 178 S--FFAAGE-L--NGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVVI--GS-EFWVVSGYKTERQG 249 (358)
Q Consensus 178 ~--~~~~~~-~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~~-~lyv~gG~~~~~~~ 249 (358)
. ....+. - ++++++.+..+. ...++.++......+.+..-.... ...+.+ ++ .||+.+.....
T Consensus 309 ~~~~~~~~~sp~~dg~~l~~~~~~g----~~~l~~~~~~~~~~~~l~~~~~~v--~~~~~~spdg~~l~~~~~~~~~--- 379 (706)
T 2z3z_A 309 VEPLHPLTFLPGSNNQFIWQSRRDG----WNHLYLYDTTGRLIRQVTKGEWEV--TNFAGFDPKGTRLYFESTEASP--- 379 (706)
T ss_dssp CCCCSCCEECTTCSSEEEEEECTTS----SCEEEEEETTSCEEEECCCSSSCE--EEEEEECTTSSEEEEEESSSCT---
T ss_pred ECccCCceeecCCCCEEEEEEccCC----ccEEEEEECCCCEEEecCCCCeEE--EeeeEEcCCCCEEEEEecCCCC---
Confidence 0 011122 2 677665554332 356888887777676664322111 111222 44 46666644221
Q ss_pred ceeeeeEEEECCCCceEEcC
Q 018336 250 IFDESAESYQLGTGEWKRAE 269 (358)
Q Consensus 250 ~~~~~i~~yd~~~~~W~~~~ 269 (358)
....++.+|..+++...+.
T Consensus 380 -~~~~l~~~d~~~~~~~~l~ 398 (706)
T 2z3z_A 380 -LERHFYCIDIKGGKTKDLT 398 (706)
T ss_dssp -TCBEEEEEETTCCCCEESC
T ss_pred -ceEEEEEEEcCCCCceecc
Confidence 1346888898887766554
No 97
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=93.56 E-value=3 Score=35.29 Aligned_cols=191 Identities=12% Similarity=0.032 Sum_probs=92.9
Q ss_pred eEEEEeCCCCCeeecCCCCCCCCCCCceeEEEE-ECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCC-CCc---
Q 018336 103 GVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVAS-SQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMP-DNR--- 177 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~-~~~--- 177 (358)
.++.||+ ++....+..... ...+++. -++.+|+.... ...+.+||+. .+.+.+.... ..+
T Consensus 68 ~i~~~~~-~g~~~~~~~~~~------~~~gl~~d~dG~l~v~~~~-------~~~v~~~~~~-g~~~~~~~~~~~~~~~~ 132 (305)
T 3dr2_A 68 RVLGWRE-DGTVDVLLDATA------FTNGNAVDAQQRLVHCEHG-------RRAITRSDAD-GQAHLLVGRYAGKRLNS 132 (305)
T ss_dssp EEEEEET-TSCEEEEEESCS------CEEEEEECTTSCEEEEETT-------TTEEEEECTT-SCEEEEECEETTEECSC
T ss_pred EEEEEeC-CCCEEEEeCCCC------ccceeeECCCCCEEEEECC-------CCEEEEECCC-CCEEEEEeccCCCccCC
Confidence 6778888 444443322111 1123332 25778776431 2468899886 6665543211 111
Q ss_pred eeeeeEEECCEEEEE----cCcCC-------CCCCCCeEEEEECCCCceEecCCCccCcCceeEEE-ECCE-EEEEeCcc
Q 018336 178 SFFAAGELNGRVIIA----GGHDE-------NKTALSSAWAYDLIKDEWTELARMTQERDECEAVV-IGSE-FWVVSGYK 244 (358)
Q Consensus 178 ~~~~~~~~~~~iyv~----GG~~~-------~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~-~~~~-lyv~gG~~ 244 (358)
.......-++.+|+. |.... .......++.||+.+++.+.+. ... ....++. -+++ ||+.....
T Consensus 133 ~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~-~p~gl~~spdg~~lyv~~~~~ 209 (305)
T 3dr2_A 133 PNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLD-HPNGLAFSPDEQTLYVSQTPE 209 (305)
T ss_dssp CCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EES-SEEEEEECTTSSEEEEEECCC
T ss_pred CCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCC-CCcceEEcCCCCEEEEEecCC
Confidence 111222236788886 32211 0011357999999888887654 111 1112222 2454 78775421
Q ss_pred cCCCCceeeeeEEEECCCCceEEcCCcccc-CCCCCceeeeeecCccCceeccccceeeceEEEEeCCeEEEECCCCCCC
Q 018336 245 TERQGIFDESAESYQLGTGEWKRAENAWKL-SQCPRSNVGVGREGKLFCWAETEAAVQFGTCRVELGGCTLVTGSGYQGG 323 (358)
Q Consensus 245 ~~~~~~~~~~i~~yd~~~~~W~~~~~~p~~-~~~~~~~~~~~~d~~~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~~~ 323 (358)
... ....+++||+..+.......+... ...+. .-++..+++||+..+
T Consensus 210 ~~~---~~~~i~~~~~~~~~l~~~~~~~~~~~~~pd------------------------gi~~d~~G~lwv~~~----- 257 (305)
T 3dr2_A 210 QGH---GSVEITAFAWRDGALHDRRHFASVPDGLPD------------------------GFCVDRGGWLWSSSG----- 257 (305)
T ss_dssp ------CCCEEEEEEEETTEEEEEEEEECCSSSCCC------------------------SEEECTTSCEEECCS-----
T ss_pred cCC---CCCEEEEEEecCCCccCCeEEEECCCCCCC------------------------eEEECCCCCEEEecC-----
Confidence 100 024688888876542211111000 00010 012334577777653
Q ss_pred CceEEEEECCCCceEeecCCC
Q 018336 324 PQEFYVVEGRNGKFRKFDVPA 344 (358)
Q Consensus 324 ~~~i~~yd~~~~~W~~~~~p~ 344 (358)
..|++||++...-..+.+|.
T Consensus 258 -~gv~~~~~~g~~~~~~~~~~ 277 (305)
T 3dr2_A 258 -TGVCVFDSDGQLLGHIPTPG 277 (305)
T ss_dssp -SEEEEECTTSCEEEEEECSS
T ss_pred -CcEEEECCCCCEEEEEECCC
Confidence 46899999766666665554
No 98
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=93.54 E-value=2.7 Score=36.40 Aligned_cols=99 Identities=10% Similarity=-0.003 Sum_probs=49.5
Q ss_pred cceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEE-CCEEEEEcCcCCCCCCCccee--EEEECCCCcEEeCCCCCCCc
Q 018336 101 SYGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASS-QGKLVVMGGWDPASYSPVSHV--FVYDFTTRRWTRGKNMPDNR 177 (358)
Q Consensus 101 ~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~lyv~Gg~~~~~~~~~~~~--~~yd~~t~~W~~~~~~~~~~ 177 (358)
...++.+|+.+++...+....... +.+ .+..- +..||+.+..... ...+ |.+|..+.+.+.+...+...
T Consensus 28 ~i~~~~~d~~~g~~~~~~~~~~~~---p~~-l~~spdg~~l~~~~~~~~~----~~~v~~~~~~~~~g~~~~~~~~~~~~ 99 (361)
T 3scy_A 28 GIYTFRFNEETGESLPLSDAEVAN---PSY-LIPSADGKFVYSVNEFSKD----QAAVSAFAFDKEKGTLHLLNTQKTMG 99 (361)
T ss_dssp EEEEEEEETTTCCEEEEEEEECSC---CCS-EEECTTSSEEEEEECCSST----TCEEEEEEEETTTTEEEEEEEEECSS
T ss_pred CEEEEEEeCCCCCEEEeecccCCC---Cce-EEECCCCCEEEEEEccCCC----CCcEEEEEEeCCCCcEEEeeEeccCC
Confidence 356777899988887765431111 111 12222 3457777653211 2244 55566657776664433221
Q ss_pred -eeeeeEEECCEEEEEcCcCCCCCCCCeEEEEECCCC
Q 018336 178 -SFFAAGELNGRVIIAGGHDENKTALSSAWAYDLIKD 213 (358)
Q Consensus 178 -~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~ 213 (358)
.....+.-+..+|+.... ...+.+|+..++
T Consensus 100 ~~p~~~~~dg~~l~~~~~~------~~~v~~~~~~~~ 130 (361)
T 3scy_A 100 ADPCYLTTNGKNIVTANYS------GGSITVFPIGQD 130 (361)
T ss_dssp SCEEEEEECSSEEEEEETT------TTEEEEEEBCTT
T ss_pred CCcEEEEECCCEEEEEECC------CCEEEEEEeCCC
Confidence 122222333456665421 246888888643
No 99
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=93.49 E-value=4.1 Score=36.60 Aligned_cols=147 Identities=17% Similarity=0.222 Sum_probs=79.7
Q ss_pred ECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCc
Q 018336 136 SQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDE 214 (358)
Q Consensus 136 ~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~ 214 (358)
.++.+++.|+.+ ..+.+||..+.+-...-....... .+.+. .++..++.|+.+ ..+.+||..+++
T Consensus 278 ~~~~~l~~~~~d-------~~i~vwd~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~sg~~d------g~i~vwd~~~~~ 343 (464)
T 3v7d_B 278 GHGNIVVSGSYD-------NTLIVWDVAQMKCLYILSGHTDRI-YSTIYDHERKRCISASMD------TTIRIWDLENGE 343 (464)
T ss_dssp EETTEEEEEETT-------SCEEEEETTTTEEEEEECCCSSCE-EEEEEETTTTEEEEEETT------SCEEEEETTTTE
T ss_pred CCCCEEEEEeCC-------CeEEEEECCCCcEEEEecCCCCCE-EEEEEcCCCCEEEEEeCC------CcEEEEECCCCc
Confidence 344555555533 368999998765432211111111 12222 245566666544 349999998764
Q ss_pred eEecCCCccCcCceeEEEECCEEEEEeCcccCCCCceeeeeEEEECCCCceEEcCCccccCCCCCceeeeeecCccCcee
Q 018336 215 WTELARMTQERDECEAVVIGSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRAENAWKLSQCPRSNVGVGREGKLFCWA 294 (358)
Q Consensus 215 W~~~~~~p~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~d~~~~~W~ 294 (358)
-. ..+.........+..++..++.|+.+ ..+.+||+.+..-...... ..
T Consensus 344 ~~--~~~~~h~~~v~~~~~~~~~l~s~s~d--------g~v~vwd~~~~~~~~~~~~-----~~---------------- 392 (464)
T 3v7d_B 344 LM--YTLQGHTALVGLLRLSDKFLVSAAAD--------GSIRGWDANDYSRKFSYHH-----TN---------------- 392 (464)
T ss_dssp EE--EEECCCSSCEEEEEECSSEEEEEETT--------SEEEEEETTTCCEEEEEEC-----TT----------------
T ss_pred EE--EEEeCCCCcEEEEEEcCCEEEEEeCC--------CcEEEEECCCCceeeeecC-----CC----------------
Confidence 32 22222222334456677777777653 3578899987642211111 00
Q ss_pred ccccceeeceEEEEeCCeEEEECCCCCCCCceEEEEECCCCceE
Q 018336 295 ETEAAVQFGTCRVELGGCTLVTGSGYQGGPQEFYVVEGRNGKFR 338 (358)
Q Consensus 295 ~lp~~~r~~~~~~~~~~~i~v~gG~~~~~~~~i~~yd~~~~~W~ 338 (358)
.........++++++.|+. ..+.+||..+++--
T Consensus 393 ------~~~~~~~~~~~~~l~~~~d-----g~i~iwd~~~g~~~ 425 (464)
T 3v7d_B 393 ------LSAITTFYVSDNILVSGSE-----NQFNIYNLRSGKLV 425 (464)
T ss_dssp ------CCCEEEEEECSSEEEEEET-----TEEEEEETTTCCEE
T ss_pred ------CccEEEEEeCCCEEEEecC-----CeEEEEECCCCcEE
Confidence 0112245567788787773 58999999988644
No 100
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=93.45 E-value=2.4 Score=36.35 Aligned_cols=103 Identities=8% Similarity=0.127 Sum_probs=53.3
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEe-CCCCCCCceeeeeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCc
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTR-GKNMPDNRSFFAAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDE 214 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~-~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~ 214 (358)
++.+++.|+.+ ..+.+||..+.+-.. +..-+... .+++. -++..++.|+.+ ..+.+||..++.
T Consensus 91 ~~~~l~s~s~D-------~~i~lWd~~~~~~~~~~~~~~~~~--~~~~~spdg~~l~~g~~d------g~v~i~~~~~~~ 155 (321)
T 3ow8_A 91 TLPIAASSSLD-------AHIRLWDLENGKQIKSIDAGPVDA--WTLAFSPDSQYLATGTHV------GKVNIFGVESGK 155 (321)
T ss_dssp SSSEEEEEETT-------SEEEEEETTTTEEEEEEECCTTCC--CCEEECTTSSEEEEECTT------SEEEEEETTTCS
T ss_pred CCCEEEEEeCC-------CcEEEEECCCCCEEEEEeCCCccE--EEEEECCCCCEEEEEcCC------CcEEEEEcCCCc
Confidence 44566666543 368899988765432 21111111 11222 255666666543 358889987764
Q ss_pred eEecCCCccCcCceeEE--EECCEEEEEeCcccCCCCceeeeeEEEECCCCc
Q 018336 215 WTELARMTQERDECEAV--VIGSEFWVVSGYKTERQGIFDESAESYQLGTGE 264 (358)
Q Consensus 215 W~~~~~~p~~~~~~~~~--~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~ 264 (358)
-...- .........+ .-++++++.|+.+ ..+..||..+++
T Consensus 156 ~~~~~--~~~~~~v~~~~~spdg~~lasg~~d--------g~i~iwd~~~~~ 197 (321)
T 3ow8_A 156 KEYSL--DTRGKFILSIAYSPDGKYLASGAID--------GIINIFDIATGK 197 (321)
T ss_dssp EEEEE--ECSSSCEEEEEECTTSSEEEEEETT--------SCEEEEETTTTE
T ss_pred eeEEe--cCCCceEEEEEECCCCCEEEEEcCC--------CeEEEEECCCCc
Confidence 32211 1111111122 2366777777653 356789988764
No 101
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=93.44 E-value=1.5 Score=37.42 Aligned_cols=111 Identities=12% Similarity=0.007 Sum_probs=53.0
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECC--CCcEEeCCCCCCCceeeeeEE-ECC-EEEEEcCcCCCCCCCCeEEEEECCC
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFT--TRRWTRGKNMPDNRSFFAAGE-LNG-RVIIAGGHDENKTALSSAWAYDLIK 212 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~--t~~W~~~~~~~~~~~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~~yd~~t 212 (358)
+..||+.+.. ...+.+|+.. +.+++.+..++....-...+. -++ .+|+.+.. ...+.+||...
T Consensus 49 g~~l~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~------~~~i~~~d~~~ 115 (343)
T 1ri6_A 49 KRYLYVGVRP-------EFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYN------AGNVSVTRLED 115 (343)
T ss_dssp SSEEEEEETT-------TTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETT------TTEEEEEEEET
T ss_pred CCEEEEeecC-------CCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecC------CCeEEEEECCC
Confidence 3456666542 1367777766 777776543332221122222 234 46666431 14588888742
Q ss_pred Cc-eEecCCCccCcCceeEE-EECC-EEEEEeCcccCCCCceeeeeEEEECCC-CceEEc
Q 018336 213 DE-WTELARMTQERDECEAV-VIGS-EFWVVSGYKTERQGIFDESAESYQLGT-GEWKRA 268 (358)
Q Consensus 213 ~~-W~~~~~~p~~~~~~~~~-~~~~-~lyv~gG~~~~~~~~~~~~i~~yd~~~-~~W~~~ 268 (358)
+. .+.+...+.......++ .-++ .+|+.+.. ...+.+||..+ ++...+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~--------~~~v~~~d~~~~~~~~~~ 167 (343)
T 1ri6_A 116 GLPVGVVDVVEGLDGCHSANISPDNRTLWVPALK--------QDRICLFTVSDDGHLVAQ 167 (343)
T ss_dssp TEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGG--------GTEEEEEEECTTSCEEEE
T ss_pred CccccccccccCCCCceEEEECCCCCEEEEecCC--------CCEEEEEEecCCCceeee
Confidence 22 22222222111112222 2244 46665422 23578899887 666543
No 102
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=93.36 E-value=0.43 Score=41.02 Aligned_cols=68 Identities=15% Similarity=0.154 Sum_probs=39.8
Q ss_pred ECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEE-ECC-EEEEEcCcCCCCCCCCeEEEEECCCC
Q 018336 136 SQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGE-LNG-RVIIAGGHDENKTALSSAWAYDLIKD 213 (358)
Q Consensus 136 ~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~~yd~~t~ 213 (358)
.++.+|+.++. ...++++|..+.+....-+.+........+. -++ .+|+.+.. ...+.+||+.++
T Consensus 9 ~~~~~~v~~~~-------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~------~~~i~~~d~~t~ 75 (349)
T 1jmx_B 9 AGHEYMIVTNY-------PNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH------YGDIYGIDLDTC 75 (349)
T ss_dssp TTCEEEEEEET-------TTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETT------TTEEEEEETTTT
T ss_pred CCCEEEEEeCC-------CCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCC------CCcEEEEeCCCC
Confidence 36677877753 3479999999887643222222001122222 234 57777532 246999999887
Q ss_pred ceE
Q 018336 214 EWT 216 (358)
Q Consensus 214 ~W~ 216 (358)
+-.
T Consensus 76 ~~~ 78 (349)
T 1jmx_B 76 KNT 78 (349)
T ss_dssp EEE
T ss_pred cEE
Confidence 654
No 103
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=93.31 E-value=1.7 Score=38.40 Aligned_cols=93 Identities=8% Similarity=0.060 Sum_probs=52.9
Q ss_pred ceeEEEECCCCcEEeCCCCCCCceeeeeEEE-CCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEEE
Q 018336 155 SHVFVYDFTTRRWTRGKNMPDNRSFFAAGEL-NGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVVI 233 (358)
Q Consensus 155 ~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~ 233 (358)
..+.+||..+.+............-.+++.. ++..+++|+.+ ..+.+||..++.-... +.........+..
T Consensus 113 ~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~d------g~i~iwd~~~~~~~~~--~~~~~~~v~~~~~ 184 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGN------GLVDIYDVESQTKLRT--MAGHQARVGCLSW 184 (401)
T ss_dssp TEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETT------SCEEEEETTTCCEEEE--ECCCSSCEEEEEE
T ss_pred CeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCC------CeEEEEECcCCeEEEE--ecCCCCceEEEEE
Confidence 4799999998887654333222212222222 56666666543 3589999987754322 1122222334455
Q ss_pred CCEEEEEeCcccCCCCceeeeeEEEECCCC
Q 018336 234 GSEFWVVSGYKTERQGIFDESAESYQLGTG 263 (358)
Q Consensus 234 ~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~ 263 (358)
++++++.|+.+ ..+..||....
T Consensus 185 ~~~~l~~~~~d--------g~i~i~d~~~~ 206 (401)
T 4aez_A 185 NRHVLSSGSRS--------GAIHHHDVRIA 206 (401)
T ss_dssp ETTEEEEEETT--------SEEEEEETTSS
T ss_pred CCCEEEEEcCC--------CCEEEEecccC
Confidence 77777777653 35778888743
No 104
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=93.24 E-value=3.9 Score=35.62 Aligned_cols=133 Identities=6% Similarity=-0.002 Sum_probs=68.5
Q ss_pred eEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEE--CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCce-e
Q 018336 103 GVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASS--QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRS-F 179 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~--~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~-~ 179 (358)
.+..||..+.+........... ..-.+++.. ++.+++.|+.+ ..+.+||..+.....+........ -
T Consensus 97 ~i~iwd~~~~~~~~~~~~~~h~---~~v~~~~~~~~~~~~l~s~~~d-------~~i~iwd~~~~~~~~~~~~~~~~~~v 166 (383)
T 3ei3_B 97 DIILWDYDVQNKTSFIQGMGPG---DAITGMKFNQFNTNQLFVSSIR-------GATTLRDFSGSVIQVFAKTDSWDYWY 166 (383)
T ss_dssp CEEEEETTSTTCEEEECCCSTT---CBEEEEEEETTEEEEEEEEETT-------TEEEEEETTSCEEEEEECCCCSSCCE
T ss_pred eEEEEeCCCcccceeeecCCcC---CceeEEEeCCCCCCEEEEEeCC-------CEEEEEECCCCceEEEeccCCCCCCe
Confidence 6788999887766543321111 111233333 34566666542 378999998776655533221111 1
Q ss_pred eeeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEEE--CCE-EEEEeCcccCCCCceeeee
Q 018336 180 FAAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVVI--GSE-FWVVSGYKTERQGIFDESA 255 (358)
Q Consensus 180 ~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~~~-lyv~gG~~~~~~~~~~~~i 255 (358)
.+++. -++..++.|+.+ ..+.+||.....-..+.... .....+.+ +++ +++.|+.+ ..+
T Consensus 167 ~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~h~---~~v~~~~~~~~~~~~l~s~~~d--------~~i 229 (383)
T 3ei3_B 167 CCVDVSVSRQMLATGDST------GRLLLLGLDGHEIFKEKLHK---AKVTHAEFNPRCDWLMATSSVD--------ATV 229 (383)
T ss_dssp EEEEEETTTTEEEEEETT------SEEEEEETTSCEEEEEECSS---SCEEEEEECSSCTTEEEEEETT--------SEE
T ss_pred EEEEECCCCCEEEEECCC------CCEEEEECCCCEEEEeccCC---CcEEEEEECCCCCCEEEEEeCC--------CEE
Confidence 12222 255666666543 46899998544333332211 11222222 344 66666542 356
Q ss_pred EEEECCC
Q 018336 256 ESYQLGT 262 (358)
Q Consensus 256 ~~yd~~~ 262 (358)
..||..+
T Consensus 230 ~iwd~~~ 236 (383)
T 3ei3_B 230 KLWDLRN 236 (383)
T ss_dssp EEEEGGG
T ss_pred EEEeCCC
Confidence 7888876
No 105
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=93.07 E-value=5.9 Score=37.23 Aligned_cols=120 Identities=10% Similarity=0.130 Sum_probs=71.9
Q ss_pred EEEECCEEEEEcCcCCCCCCCcceeEEEEC-CCCc--EEeCCCCCCC--------ceeeeeEEECCEEEEEcCcCCCCCC
Q 018336 133 VASSQGKLVVMGGWDPASYSPVSHVFVYDF-TTRR--WTRGKNMPDN--------RSFFAAGELNGRVIIAGGHDENKTA 201 (358)
Q Consensus 133 ~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~-~t~~--W~~~~~~~~~--------~~~~~~~~~~~~iyv~GG~~~~~~~ 201 (358)
.++.++.||+.... ...++.+|. .+.+ |+.-...+.. ....+.++.++.+|+...
T Consensus 58 P~v~~g~vyv~~~~-------~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------- 123 (571)
T 2ad6_A 58 PLVIGDMMYVHSAF-------PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA------- 123 (571)
T ss_dssp CEEETTEEEEECST-------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-------
T ss_pred cEEECCEEEEEeCC-------CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC-------
Confidence 44579999998652 236899998 7764 8764332211 112245567899988732
Q ss_pred CCeEEEEECCCC--ceEec-CCCccC-cCceeEEEECCEEEEEeCcccCCCCceeeeeEEEECCCCc--eEEcC
Q 018336 202 LSSAWAYDLIKD--EWTEL-ARMTQE-RDECEAVVIGSEFWVVSGYKTERQGIFDESAESYQLGTGE--WKRAE 269 (358)
Q Consensus 202 ~~~~~~yd~~t~--~W~~~-~~~p~~-~~~~~~~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~--W~~~~ 269 (358)
-..++++|.+++ .|+.- ...+.. ......++.++++|+-.+..... ....+.+||..+++ |+.-.
T Consensus 124 dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~---~~g~v~a~D~~tG~~~W~~~~ 194 (571)
T 2ad6_A 124 NGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELG---VRGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGT---CCCEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccC---CCCEEEEEECCCCcEEEEEcc
Confidence 246999999877 58753 221111 11223356789888765321110 13478999999875 87543
No 106
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=93.05 E-value=4.7 Score=35.99 Aligned_cols=145 Identities=9% Similarity=-0.052 Sum_probs=79.1
Q ss_pred ceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEE-ECCE-EEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCcee
Q 018336 102 YGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVAS-SQGK-LVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSF 179 (358)
Q Consensus 102 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~-lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~ 179 (358)
..++.+|..+++...+..... . ...++. -++. |++.+..++ ...++++|..+..-+.+.... ...
T Consensus 247 ~~i~~~d~~~~~~~~l~~~~~-----~-~~~~~~spdg~~l~~~s~~~g-----~~~i~~~d~~~~~~~~l~~~~--~~~ 313 (415)
T 2hqs_A 247 LNLYVMDLASGQIRQVTDGRS-----N-NTEPTWFPDSQNLAFTSDQAG-----RPQVYKVNINGGAPQRITWEG--SQN 313 (415)
T ss_dssp CEEEEEETTTCCEEECCCCSS-----C-EEEEEECTTSSEEEEEECTTS-----SCEEEEEETTSSCCEECCCSS--SEE
T ss_pred ceEEEEECCCCCEEeCcCCCC-----c-ccceEECCCCCEEEEEECCCC-----CcEEEEEECCCCCEEEEecCC--Ccc
Confidence 358889998888766654332 1 112222 2444 444432211 347999999887755543221 111
Q ss_pred eeeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEE-EECCEEEEEeCcccCCCCceeeeeEE
Q 018336 180 FAAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAV-VIGSEFWVVSGYKTERQGIFDESAES 257 (358)
Q Consensus 180 ~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~-~~~~~lyv~gG~~~~~~~~~~~~i~~ 257 (358)
...+. -+++.+++++.... ...++++|+.++..+.+.... .....+ .-+|+.+++++.... ...++.
T Consensus 314 ~~~~~spdG~~l~~~~~~~g---~~~i~~~d~~~~~~~~l~~~~---~~~~~~~spdg~~l~~~s~~~~-----~~~l~~ 382 (415)
T 2hqs_A 314 QDADVSSDGKFMVMVSSNGG---QQHIAKQDLATGGVQVLSSTF---LDETPSLAPNGTMVIYSSSQGM-----GSVLNL 382 (415)
T ss_dssp EEEEECTTSSEEEEEEECSS---CEEEEEEETTTCCEEECCCSS---SCEEEEECTTSSEEEEEEEETT-----EEEEEE
T ss_pred cCeEECCCCCEEEEEECcCC---ceEEEEEECCCCCEEEecCCC---CcCCeEEcCCCCEEEEEEcCCC-----ccEEEE
Confidence 22222 24544444333221 357999999998887665332 112222 336776666654321 347899
Q ss_pred EECCCCceEEcCC
Q 018336 258 YQLGTGEWKRAEN 270 (358)
Q Consensus 258 yd~~~~~W~~~~~ 270 (358)
+|...+....+..
T Consensus 383 ~d~~g~~~~~l~~ 395 (415)
T 2hqs_A 383 VSTDGRFKARLPA 395 (415)
T ss_dssp EETTSCCEEECCC
T ss_pred EECCCCcEEEeeC
Confidence 9998877776654
No 107
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=93.01 E-value=1.9 Score=36.30 Aligned_cols=142 Identities=11% Similarity=0.120 Sum_probs=68.2
Q ss_pred eEEEEeCCCCCeeec-CCCCCCCCCCCceeEEEE-ECCEEEEEcCcCC--------CCCCCcceeEEEECCCCcEEeCC-
Q 018336 103 GVTVFDPVSLTWDRL-GPVPEYPAGLPLFCQVAS-SQGKLVVMGGWDP--------ASYSPVSHVFVYDFTTRRWTRGK- 171 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~-~~~~~~~~~~~~~~~~~~-~~~~lyv~Gg~~~--------~~~~~~~~~~~yd~~t~~W~~~~- 171 (358)
.+..||+. ++...+ ......... .....++. -++.+|+...... ........+++||+. .+...+.
T Consensus 93 ~l~~~d~~-g~~~~~~~~~~~~~~~-~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~ 169 (314)
T 1pjx_A 93 GLLVVQTD-GTFEEIAKKDSEGRRM-QGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT 169 (314)
T ss_dssp EEEEEETT-SCEEECCSBCTTSCBC-BCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE
T ss_pred CEEEEeCC-CCEEEEEeccCCCccc-cCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEecc
Confidence 67889998 776655 322111100 01113333 3677888754221 001123579999986 5554431
Q ss_pred CCCCCceeeeeEEE-----CC-EEEEEcCcCCCCCCCCeEEEEECC-CCceEec---CCCccCc-CceeEEEE--CCEEE
Q 018336 172 NMPDNRSFFAAGEL-----NG-RVIIAGGHDENKTALSSAWAYDLI-KDEWTEL---ARMTQER-DECEAVVI--GSEFW 238 (358)
Q Consensus 172 ~~~~~~~~~~~~~~-----~~-~iyv~GG~~~~~~~~~~~~~yd~~-t~~W~~~---~~~p~~~-~~~~~~~~--~~~ly 238 (358)
.+..+ ...+.. ++ .+|+.... ...+.+||+. +++.... ..++... .....+.+ +|++|
T Consensus 170 ~~~~~---~~i~~~~~~d~dg~~l~v~~~~------~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~ 240 (314)
T 1pjx_A 170 AFQFP---NGIAVRHMNDGRPYQLIVAETP------TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLL 240 (314)
T ss_dssp EESSE---EEEEEEECTTSCEEEEEEEETT------TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEE
T ss_pred CCCCc---ceEEEecccCCCCCEEEEEECC------CCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEE
Confidence 11111 222333 33 57776422 2468889875 4443221 1222111 11222232 57788
Q ss_pred EEeCcccCCCCceeeeeEEEECCCCc
Q 018336 239 VVSGYKTERQGIFDESAESYQLGTGE 264 (358)
Q Consensus 239 v~gG~~~~~~~~~~~~i~~yd~~~~~ 264 (358)
+.... ...+.+||+.+++
T Consensus 241 v~~~~--------~~~i~~~d~~~g~ 258 (314)
T 1pjx_A 241 VANWG--------SSHIEVFGPDGGQ 258 (314)
T ss_dssp EEEET--------TTEEEEECTTCBS
T ss_pred EEEcC--------CCEEEEEcCCCCc
Confidence 87522 2357889988554
No 108
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=92.96 E-value=3.9 Score=34.91 Aligned_cols=135 Identities=9% Similarity=0.119 Sum_probs=67.3
Q ss_pred ceEEEEeCCCCCeeec-CCCCCCCCCCCceeEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceee
Q 018336 102 YGVTVFDPVSLTWDRL-GPVPEYPAGLPLFCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFF 180 (358)
Q Consensus 102 ~~~~~~d~~~~~W~~~-~~~~~~~~~~~~~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~ 180 (358)
..+..+|..+++-... ..-+. ........-++..++.|+.+ ..+.+||..+.+-...-... ...-.
T Consensus 102 ~~i~lWd~~~~~~~~~~~~~~~-----~~~~~~~spdg~~l~~g~~d-------g~v~i~~~~~~~~~~~~~~~-~~~v~ 168 (321)
T 3ow8_A 102 AHIRLWDLENGKQIKSIDAGPV-----DAWTLAFSPDSQYLATGTHV-------GKVNIFGVESGKKEYSLDTR-GKFIL 168 (321)
T ss_dssp SEEEEEETTTTEEEEEEECCTT-----CCCCEEECTTSSEEEEECTT-------SEEEEEETTTCSEEEEEECS-SSCEE
T ss_pred CcEEEEECCCCCEEEEEeCCCc-----cEEEEEECCCCCEEEEEcCC-------CcEEEEEcCCCceeEEecCC-CceEE
Confidence 3577888877654322 11111 11112222355666666542 36888888776532211111 11111
Q ss_pred eeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEE--EECCEEEEEeCcccCCCCceeeeeEE
Q 018336 181 AAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAV--VIGSEFWVVSGYKTERQGIFDESAES 257 (358)
Q Consensus 181 ~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~--~~~~~lyv~gG~~~~~~~~~~~~i~~ 257 (358)
+++. -+++.++.|+.+ ..+.+||..+++-... +.........+ .-++++++.|+.+ ..+..
T Consensus 169 ~~~~spdg~~lasg~~d------g~i~iwd~~~~~~~~~--~~~h~~~v~~l~~spd~~~l~s~s~d--------g~i~i 232 (321)
T 3ow8_A 169 SIAYSPDGKYLASGAID------GIINIFDIATGKLLHT--LEGHAMPIRSLTFSPDSQLLVTASDD--------GYIKI 232 (321)
T ss_dssp EEEECTTSSEEEEEETT------SCEEEEETTTTEEEEE--ECCCSSCCCEEEECTTSCEEEEECTT--------SCEEE
T ss_pred EEEECCCCCEEEEEcCC------CeEEEEECCCCcEEEE--EcccCCceeEEEEcCCCCEEEEEcCC--------CeEEE
Confidence 2222 256666776654 3489999988753221 11111111122 2367777777653 24678
Q ss_pred EECCCCce
Q 018336 258 YQLGTGEW 265 (358)
Q Consensus 258 yd~~~~~W 265 (358)
||..+.+.
T Consensus 233 wd~~~~~~ 240 (321)
T 3ow8_A 233 YDVQHANL 240 (321)
T ss_dssp EETTTCCE
T ss_pred EECCCcce
Confidence 99887654
No 109
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=92.94 E-value=4 Score=35.76 Aligned_cols=91 Identities=11% Similarity=0.096 Sum_probs=44.8
Q ss_pred ceeEEEECCCCcEEe-CCCCCCCceeeeeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCceEe-cCCCccCcCceeEE
Q 018336 155 SHVFVYDFTTRRWTR-GKNMPDNRSFFAAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDEWTE-LARMTQERDECEAV 231 (358)
Q Consensus 155 ~~~~~yd~~t~~W~~-~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~-~~~~p~~~~~~~~~ 231 (358)
..+.+||..+.+-.. +..... .-..++. -++..++.|+.+ ..+.+||..+..-.. +.... .....+.
T Consensus 227 g~i~~~d~~~~~~~~~~~~~~~--~i~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~--~~i~~~~ 296 (425)
T 1r5m_A 227 GAIFVYQITEKTPTGKLIGHHG--PISVLEFNDTNKLLLSASDD------GTLRIWHGGNGNSQNCFYGHS--QSIVSAS 296 (425)
T ss_dssp GCEEEEETTCSSCSEEECCCSS--CEEEEEEETTTTEEEEEETT------SCEEEECSSSBSCSEEECCCS--SCEEEEE
T ss_pred CeEEEEEcCCCceeeeeccCCC--ceEEEEECCCCCEEEEEcCC------CEEEEEECCCCccceEecCCC--ccEEEEE
Confidence 478999998754321 111111 1112222 245566666543 358889987654221 11111 1112233
Q ss_pred EE-CCEEEEEeCcccCCCCceeeeeEEEECCCCc
Q 018336 232 VI-GSEFWVVSGYKTERQGIFDESAESYQLGTGE 264 (358)
Q Consensus 232 ~~-~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~ 264 (358)
.. ++ +++.++. ...+..||..+.+
T Consensus 297 ~~~~~-~l~~~~~--------d~~i~i~d~~~~~ 321 (425)
T 1r5m_A 297 WVGDD-KVISCSM--------DGSVRLWSLKQNT 321 (425)
T ss_dssp EETTT-EEEEEET--------TSEEEEEETTTTE
T ss_pred ECCCC-EEEEEeC--------CCcEEEEECCCCc
Confidence 33 44 5555543 2357889988764
No 110
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=92.89 E-value=2.4 Score=37.48 Aligned_cols=104 Identities=12% Similarity=0.147 Sum_probs=54.3
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEEE-CCEEEEEcCcCCCCCCCCeEEEEECCCCce
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGEL-NGRVIIAGGHDENKTALSSAWAYDLIKDEW 215 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W 215 (358)
++.+++.|+.+ ..+.+||..+.+-...-.. ....-.+++.. ++.+++.|+.+ ..+.+||..+.+-
T Consensus 108 ~~~~l~~~~~d-------g~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~s~d------~~i~iwd~~~~~~ 173 (420)
T 3vl1_A 108 QMRRFILGTTE-------GDIKVLDSNFNLQREIDQA-HVSEITKLKFFPSGEALISSSQD------MQLKIWSVKDGSN 173 (420)
T ss_dssp SSCEEEEEETT-------SCEEEECTTSCEEEEETTS-SSSCEEEEEECTTSSEEEEEETT------SEEEEEETTTCCC
T ss_pred CCCEEEEEECC-------CCEEEEeCCCcceeeeccc-ccCccEEEEECCCCCEEEEEeCC------CeEEEEeCCCCcC
Confidence 56677777643 3689999887655433211 11111122222 55566666543 3599999976532
Q ss_pred EecCCCccCcCce-eEEEE-CCEEEEEeCcccCCCCceeeeeEEEECCCCc
Q 018336 216 TELARMTQERDEC-EAVVI-GSEFWVVSGYKTERQGIFDESAESYQLGTGE 264 (358)
Q Consensus 216 ~~~~~~p~~~~~~-~~~~~-~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~ 264 (358)
. ..+....... .+... +++.++.|+.+ ..+..||..+++
T Consensus 174 ~--~~~~~h~~~v~~~~~~~~~~~l~s~~~d--------~~v~iwd~~~~~ 214 (420)
T 3vl1_A 174 P--RTLIGHRATVTDIAIIDRGRNVLSASLD--------GTIRLWECGTGT 214 (420)
T ss_dssp C--EEEECCSSCEEEEEEETTTTEEEEEETT--------SCEEEEETTTTE
T ss_pred c--eEEcCCCCcEEEEEEcCCCCEEEEEcCC--------CcEEEeECCCCc
Confidence 1 1111111111 22222 56666676543 246789988764
No 111
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=92.85 E-value=4.5 Score=38.02 Aligned_cols=121 Identities=12% Similarity=0.162 Sum_probs=70.2
Q ss_pred eeEEECCEEEEEcCcCCCCCCCCeEEEEEC-CCC--ceEecCCCccC--------cCceeEEEECCEEEEEeCcccCCCC
Q 018336 181 AAGELNGRVIIAGGHDENKTALSSAWAYDL-IKD--EWTELARMTQE--------RDECEAVVIGSEFWVVSGYKTERQG 249 (358)
Q Consensus 181 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~-~t~--~W~~~~~~p~~--------~~~~~~~~~~~~lyv~gG~~~~~~~ 249 (358)
+.++.++.+|+.... ...++++|. .++ .|+.-...+.. ......++.+++||+...
T Consensus 57 ~P~v~~g~vyv~~~~------~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------- 123 (571)
T 2ad6_A 57 APLVIGDMMYVHSAF------PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA------- 123 (571)
T ss_dssp CCEEETTEEEEECST------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-------
T ss_pred ccEEECCEEEEEeCC------CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC-------
Confidence 345679999998542 245999998 766 49864432211 111234577899988753
Q ss_pred ceeeeeEEEECCCCc--eEEcCCccccCCCCCceeeeeecCccCceeccccceeeceEEEEeCCeEEEECCCCC-CCCce
Q 018336 250 IFDESAESYQLGTGE--WKRAENAWKLSQCPRSNVGVGREGKLFCWAETEAAVQFGTCRVELGGCTLVTGSGYQ-GGPQE 326 (358)
Q Consensus 250 ~~~~~i~~yd~~~~~--W~~~~~~p~~~~~~~~~~~~~~d~~~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~-~~~~~ 326 (358)
...++++|..+++ |+.-..-+... .. ...+.+..+++||+-.+... .....
T Consensus 124 --dg~l~alD~~tG~~~W~~~~~~~~~~-~~-----------------------~~~~P~v~~g~v~vg~~~~~~~~~g~ 177 (571)
T 2ad6_A 124 --NGHLLALDAKTGKINWEVEVCDPKVG-ST-----------------------LTQAPFVAKDTVLMGCSGAELGVRGA 177 (571)
T ss_dssp --TSEEEEEETTTCCEEEEEECCCGGGT-CB-----------------------CCSCCEEETTEEEEECBCGGGTCCCE
T ss_pred --CCEEEEEECCCCCEEEEecCCCCCcc-ce-----------------------eccCCEEECCEEEEEecCCccCCCCE
Confidence 2357899998874 87532211000 00 00112446888887654211 01158
Q ss_pred EEEEECCCCc--eEee
Q 018336 327 FYVVEGRNGK--FRKF 340 (358)
Q Consensus 327 i~~yd~~~~~--W~~~ 340 (358)
++.||.++++ |+.-
T Consensus 178 v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 178 VNAFDLKTGELKWRAF 193 (571)
T ss_dssp EEEEETTTCCEEEEEE
T ss_pred EEEEECCCCcEEEEEc
Confidence 9999998766 8754
No 112
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=92.81 E-value=2.9 Score=36.83 Aligned_cols=108 Identities=11% Similarity=0.084 Sum_probs=55.1
Q ss_pred EEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCC-CCCCceeeeeEEE-CCEEEEEcCcCCCCCCCCeEEEEECCCCceE
Q 018336 139 KLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKN-MPDNRSFFAAGEL-NGRVIIAGGHDENKTALSSAWAYDLIKDEWT 216 (358)
Q Consensus 139 ~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~-~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~ 216 (358)
.+++.|+.+ ..+.+||..+.+....-. ......-.+++.. ++..++.|+.+ ..+.+||+.++.-.
T Consensus 145 ~~l~s~~~d-------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~~~ 211 (402)
T 2aq5_A 145 NVLLSAGCD-------NVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD------KRVRVIEPRKGTVV 211 (402)
T ss_dssp TEEEEEETT-------SCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT------SEEEEEETTTTEEE
T ss_pred CEEEEEcCC-------CEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecC------CcEEEEeCCCCcee
Confidence 466666643 368999998876543211 1111111222222 56666666543 46999999886543
Q ss_pred ecC--CCccCcCceeEEEECCEEEEEeCcccCCCCceeeeeEEEECCCCc
Q 018336 217 ELA--RMTQERDECEAVVIGSEFWVVSGYKTERQGIFDESAESYQLGTGE 264 (358)
Q Consensus 217 ~~~--~~p~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~ 264 (358)
..- .............-++++++.|. .... ...+..||..+..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~-~~~~----d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 212 AEKDRPHEGTRPVHAVFVSEGKILTTGF-SRMS----ERQVALWDTKHLE 256 (402)
T ss_dssp EEEECSSCSSSCCEEEECSTTEEEEEEE-CTTC----CEEEEEEETTBCS
T ss_pred eeeccCCCCCcceEEEEcCCCcEEEEec-cCCC----CceEEEEcCcccc
Confidence 221 11111111222234667666652 1111 3467889987653
No 113
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=92.72 E-value=3 Score=36.77 Aligned_cols=108 Identities=11% Similarity=0.072 Sum_probs=55.9
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEe-----CCCCCCCcee-eeeEEE-CC-EEEEEcCcCCCCCCCCeEEEE
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTR-----GKNMPDNRSF-FAAGEL-NG-RVIIAGGHDENKTALSSAWAY 208 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~-----~~~~~~~~~~-~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~y 208 (358)
++.+++.|+.+ ..+.+||..++.... +..+...... .+++.. ++ .+++.|+.+ ..+.+|
T Consensus 93 ~~~~l~s~s~d-------g~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d------g~i~iw 159 (402)
T 2aq5_A 93 NDNVIASGSED-------CTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD------NVILVW 159 (402)
T ss_dssp CTTEEEEEETT-------SEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETT------SCEEEE
T ss_pred CCCEEEEEeCC-------CeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCC------CEEEEE
Confidence 56677777643 368999988765421 1111111111 112222 33 466666654 349999
Q ss_pred ECCCCceEecCCCccCcCceeEEEE--CCEEEEEeCcccCCCCceeeeeEEEECCCCce
Q 018336 209 DLIKDEWTELARMTQERDECEAVVI--GSEFWVVSGYKTERQGIFDESAESYQLGTGEW 265 (358)
Q Consensus 209 d~~t~~W~~~~~~p~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W 265 (358)
|..++.....-...........+.+ ++++++.|+.+ ..+.+||+.+++-
T Consensus 160 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------~~i~iwd~~~~~~ 210 (402)
T 2aq5_A 160 DVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD--------KRVRVIEPRKGTV 210 (402)
T ss_dssp ETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT--------SEEEEEETTTTEE
T ss_pred ECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecC--------CcEEEEeCCCCce
Confidence 9988765422110111111222333 66677776542 3578899987653
No 114
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=92.63 E-value=3.4 Score=39.86 Aligned_cols=118 Identities=16% Similarity=0.167 Sum_probs=71.7
Q ss_pred EEEECCEEEEEcCcCCCCCCCcceeEEEECCCCc--EEeCCCCCCC--------ceeeeeEEECCEEEEEcCcCCCCCCC
Q 018336 133 VASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRR--WTRGKNMPDN--------RSFFAAGELNGRVIIAGGHDENKTAL 202 (358)
Q Consensus 133 ~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~--------~~~~~~~~~~~~iyv~GG~~~~~~~~ 202 (358)
-++.++.||+... ...++.+|..|.+ |+.-...+.. ....+.++.++.||+... -
T Consensus 66 P~v~~g~vyv~~~--------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~-------d 130 (689)
T 1yiq_A 66 PIVVDGVMYTTGP--------FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL-------D 130 (689)
T ss_dssp CEEETTEEEEECG--------GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-------T
T ss_pred CEEECCEEEEEcC--------CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc-------C
Confidence 3467999999865 3468999988764 8764432211 112234567888888642 2
Q ss_pred CeEEEEECCCCc--eEecCC-Ccc--CcCceeEEEECCEEEEEeCcccCCCCceeeeeEEEECCCCc--eEEc
Q 018336 203 SSAWAYDLIKDE--WTELAR-MTQ--ERDECEAVVIGSEFWVVSGYKTERQGIFDESAESYQLGTGE--WKRA 268 (358)
Q Consensus 203 ~~~~~yd~~t~~--W~~~~~-~p~--~~~~~~~~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~--W~~~ 268 (358)
..++++|.+|++ |+.-.. -+. .....+.++.++.+|+-.+.... .....+.+||..+++ |+.-
T Consensus 131 g~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~---~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 131 GRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEF---GVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp SEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTT---CCBCEEEEEETTTCCEEEEEE
T ss_pred CEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCcc---CCCCEEEEEECCCCcEEEEec
Confidence 469999998774 876442 111 11122345679998875332111 124578999999875 8753
No 115
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=92.62 E-value=4.2 Score=34.44 Aligned_cols=135 Identities=13% Similarity=0.077 Sum_probs=70.8
Q ss_pred ceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEE-CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceee
Q 018336 102 YGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASS-QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFF 180 (358)
Q Consensus 102 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~ 180 (358)
..++.+|+... .......+. .-++++.. ++.+|+...... ...++++|+.+.+.+.+...+..+...
T Consensus 53 ~~I~~~d~~g~-~~~~~~~~~------~p~gia~~~dG~l~vad~~~~-----~~~v~~~d~~~g~~~~~~~~~~~~~~~ 120 (306)
T 2p4o_A 53 GEIVSITPDGN-QQIHATVEG------KVSGLAFTSNGDLVATGWNAD-----SIPVVSLVKSDGTVETLLTLPDAIFLN 120 (306)
T ss_dssp TEEEEECTTCC-EEEEEECSS------EEEEEEECTTSCEEEEEECTT-----SCEEEEEECTTSCEEEEEECTTCSCEE
T ss_pred CeEEEECCCCc-eEEEEeCCC------CceeEEEcCCCcEEEEeccCC-----cceEEEEcCCCCeEEEEEeCCCccccC
Confidence 36888998764 322222221 11234333 567888753210 125888999888887665444434333
Q ss_pred eeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCc---eEecCC----Cc-cCcCce-eEEEECCEEEEEeCcccCCCCc
Q 018336 181 AAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDE---WTELAR----MT-QERDEC-EAVVIGSEFWVVSGYKTERQGI 250 (358)
Q Consensus 181 ~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~---W~~~~~----~p-~~~~~~-~~~~~~~~lyv~gG~~~~~~~~ 250 (358)
+.+. .++.+|+.-. ....++++|+.++. |..-+. .+ ...... .+..-++.||+.--.
T Consensus 121 g~~~~~~~~~~v~d~------~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~~------- 187 (306)
T 2p4o_A 121 GITPLSDTQYLTADS------YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTE------- 187 (306)
T ss_dssp EEEESSSSEEEEEET------TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETT-------
T ss_pred cccccCCCcEEEEEC------CCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEEeCC-------
Confidence 3333 3566777631 13579999987642 221111 11 111112 232334578887532
Q ss_pred eeeeeEEEECCC
Q 018336 251 FDESAESYQLGT 262 (358)
Q Consensus 251 ~~~~i~~yd~~~ 262 (358)
...|.+||+..
T Consensus 188 -~~~I~~~~~~~ 198 (306)
T 2p4o_A 188 -KMLLLRIPVDS 198 (306)
T ss_dssp -TTEEEEEEBCT
T ss_pred -CCEEEEEEeCC
Confidence 34688898875
No 116
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=92.60 E-value=6.6 Score=36.58 Aligned_cols=92 Identities=11% Similarity=-0.115 Sum_probs=48.3
Q ss_pred ceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEE--CCEEEEEcCcCCCCCCCcceeEEEEC--CCCcEEeCCCCCCCc
Q 018336 102 YGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASS--QGKLVVMGGWDPASYSPVSHVFVYDF--TTRRWTRGKNMPDNR 177 (358)
Q Consensus 102 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~--~~~lyv~Gg~~~~~~~~~~~~~~yd~--~t~~W~~~~~~~~~~ 177 (358)
..+.++|..+++-...-.... . .+.++.. +..+|+.+. -+.+.+||. .+.+- +..++...
T Consensus 159 ~~V~v~D~~t~~~~~~i~~g~-----~-~~~v~~spdg~~l~v~~~--------d~~V~v~D~~~~t~~~--~~~i~~g~ 222 (543)
T 1nir_A 159 GQIALVDGDSKKIVKVIDTGY-----A-VHISRMSASGRYLLVIGR--------DARIDMIDLWAKEPTK--VAEIKIGI 222 (543)
T ss_dssp TEEEEEETTTCCEEEEEECST-----T-EEEEEECTTSCEEEEEET--------TSEEEEEETTSSSCEE--EEEEECCS
T ss_pred CeEEEEECCCceEEEEEecCc-----c-cceEEECCCCCEEEEECC--------CCeEEEEECcCCCCcE--EEEEecCC
Confidence 368889998886533222111 1 2233332 446777654 257999999 56543 22222222
Q ss_pred eeeeeEE-E----CC-EEEEEcCcCCCCCCCCeEEEEECCCCce
Q 018336 178 SFFAAGE-L----NG-RVIIAGGHDENKTALSSAWAYDLIKDEW 215 (358)
Q Consensus 178 ~~~~~~~-~----~~-~iyv~GG~~~~~~~~~~~~~yd~~t~~W 215 (358)
.-..++. - ++ .+|+.. +. ...+.++|..+.+-
T Consensus 223 ~p~~va~sp~~~~dg~~l~v~~-~~-----~~~v~v~D~~t~~~ 260 (543)
T 1nir_A 223 EARSVESSKFKGYEDRYTIAGA-YW-----PPQFAIMDGETLEP 260 (543)
T ss_dssp EEEEEEECCSTTCTTTEEEEEE-EE-----SSEEEEEETTTCCE
T ss_pred CcceEEeCCCcCCCCCEEEEEE-cc-----CCeEEEEecccccc
Confidence 2233333 2 44 455543 21 24688889887654
No 117
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=92.50 E-value=2.8 Score=40.31 Aligned_cols=118 Identities=13% Similarity=0.121 Sum_probs=71.1
Q ss_pred EEEECCEEEEEcCcCCCCCCCcceeEEEECCCCc--EEeCCCCCCC--------ceeeeeEEECCEEEEEcCcCCCCCCC
Q 018336 133 VASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRR--WTRGKNMPDN--------RSFFAAGELNGRVIIAGGHDENKTAL 202 (358)
Q Consensus 133 ~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~--------~~~~~~~~~~~~iyv~GG~~~~~~~~ 202 (358)
-++.++.||+... ...++.+|..|.+ |+.-...+.. ....+.++.+++||+... -
T Consensus 62 P~v~~g~vyv~~~--------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-------d 126 (668)
T 1kv9_A 62 PLFHDGVIYTSMS--------WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL-------D 126 (668)
T ss_dssp CEEETTEEEEEEG--------GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT-------T
T ss_pred CEEECCEEEEECC--------CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC-------C
Confidence 3467999999865 3478899987764 8764432211 012234567888888632 2
Q ss_pred CeEEEEECCCCc--eEecCCCcc--CcCceeEEEECCEEEEEeCcccCCCCceeeeeEEEECCCCc--eEEc
Q 018336 203 SSAWAYDLIKDE--WTELARMTQ--ERDECEAVVIGSEFWVVSGYKTERQGIFDESAESYQLGTGE--WKRA 268 (358)
Q Consensus 203 ~~~~~yd~~t~~--W~~~~~~p~--~~~~~~~~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~--W~~~ 268 (358)
..++++|.+|++ |+.-..-+. .......++.++++|+-.+.... .....+.+||..+++ |+.-
T Consensus 127 g~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~---~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 127 GRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEY---GVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp SEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTT---CCBCEEEEEETTTCCEEEEEE
T ss_pred CEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCc---CCCCEEEEEECCCCcEEEEec
Confidence 469999998774 886432111 11122345678888875332111 124578999998875 8753
No 118
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=92.45 E-value=4.8 Score=34.59 Aligned_cols=93 Identities=13% Similarity=0.213 Sum_probs=48.4
Q ss_pred ceeEEEECCCCcEEeCCCCCCCceeeeeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEEE
Q 018336 155 SHVFVYDFTTRRWTRGKNMPDNRSFFAAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVVI 233 (358)
Q Consensus 155 ~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~ 233 (358)
..+.+||..+.+-...-.-... .-.+++. -++.+++.|+.+. .+.+||..++.-... +.........+.+
T Consensus 164 ~~i~~wd~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~sg~~d~------~v~~wd~~~~~~~~~--~~~h~~~v~~v~~ 234 (340)
T 1got_B 164 TTCALWDIETGQQTTTFTGHTG-DVMSLSLAPDTRLFVSGACDA------SAKLWDVREGMCRQT--FTGHESDINAICF 234 (340)
T ss_dssp SCEEEEETTTTEEEEEECCCSS-CEEEEEECTTSSEEEEEETTS------CEEEEETTTCSEEEE--ECCCSSCEEEEEE
T ss_pred CcEEEEECCCCcEEEEEcCCCC-ceEEEEECCCCCEEEEEeCCC------cEEEEECCCCeeEEE--EcCCcCCEEEEEE
Confidence 3688999988764321110011 1112222 2566777776543 488999987643221 1111111122222
Q ss_pred --CCEEEEEeCcccCCCCceeeeeEEEECCCCc
Q 018336 234 --GSEFWVVSGYKTERQGIFDESAESYQLGTGE 264 (358)
Q Consensus 234 --~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~ 264 (358)
++++++.|+.+ ..+..||..+++
T Consensus 235 ~p~~~~l~s~s~d--------~~v~iwd~~~~~ 259 (340)
T 1got_B 235 FPNGNAFATGSDD--------ATCRLFDLRADQ 259 (340)
T ss_dssp CTTSSEEEEEETT--------SCEEEEETTTTE
T ss_pred cCCCCEEEEEcCC--------CcEEEEECCCCc
Confidence 56777777653 356789988764
No 119
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=92.40 E-value=3.6 Score=37.46 Aligned_cols=57 Identities=14% Similarity=0.205 Sum_probs=37.1
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeC--CCCCCCceeeeeEEECCEEEEEcCcCCCCCCCCeEEEEECCCC
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRG--KNMPDNRSFFAAGELNGRVIIAGGHDENKTALSSAWAYDLIKD 213 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~--~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~ 213 (358)
++.+|++.| +..|.||..+++.... +.+| . --++....+.+|++-| +..+.||..+.
T Consensus 158 ~~~~yfFkG---------~~yw~yd~~~~~~~~~~w~gi~--~-iDAA~~~~g~~YfFkG--------~~y~rfd~~~~ 216 (460)
T 1qhu_A 158 DEGILFFQG---------NRKWFWDLTTGTKKERSWPAVG--N-CTSALRWLGRYYCFQG--------NQFLRFNPVSG 216 (460)
T ss_dssp SSEEEEEET---------TEEEEEETTTTEEEEECCTTSC--C-CSEEEEETTEEEEEET--------TEEEEECTTTC
T ss_pred CCeEEEEec---------ccEEEEecccceeecccCCCCC--c-cchheeeCCceEEEEC--------CEEEEEcCccC
Confidence 678888877 3689999988765432 2233 2 2233345789999966 34677776554
No 120
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=92.33 E-value=7.7 Score=36.71 Aligned_cols=122 Identities=12% Similarity=0.153 Sum_probs=70.7
Q ss_pred EEEEECCEEEEEcCcCCCCCCCcceeEEEEC-CCCc--EEeCCCCCCC--------ceeeeeEE--ECCE----EEEEcC
Q 018336 132 QVASSQGKLVVMGGWDPASYSPVSHVFVYDF-TTRR--WTRGKNMPDN--------RSFFAAGE--LNGR----VIIAGG 194 (358)
Q Consensus 132 ~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~-~t~~--W~~~~~~~~~--------~~~~~~~~--~~~~----iyv~GG 194 (358)
.-++.++.||+.... ...++.+|. .|.+ |+.-...+.. ....+.++ .++. ||+...
T Consensus 57 tP~v~~g~vyv~~~~-------~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~ 129 (599)
T 1w6s_A 57 APLVVDGKMYIHTSF-------PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL 129 (599)
T ss_dssp CCEEETTEEEEECST-------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT
T ss_pred ccEEECCEEEEEeCC-------CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC
Confidence 345569999998652 236899998 7764 8765433211 11123444 5666 877632
Q ss_pred cCCCCCCCCeEEEEECCCCc--eEecC-CCccC-cCceeEEEECCEEEEEeCcccCCCCceeeeeEEEECCCCc--eEEc
Q 018336 195 HDENKTALSSAWAYDLIKDE--WTELA-RMTQE-RDECEAVVIGSEFWVVSGYKTERQGIFDESAESYQLGTGE--WKRA 268 (358)
Q Consensus 195 ~~~~~~~~~~~~~yd~~t~~--W~~~~-~~p~~-~~~~~~~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~--W~~~ 268 (358)
-..++++|.++++ |+.-. ..... ......++.++++|+-.+.... .....+..||..+++ |+.-
T Consensus 130 -------dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~---g~~g~v~A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 130 -------DGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAEL---GVRGYLTAYDVKTGEQVWRAY 199 (599)
T ss_dssp -------TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGG---TCCCEEEEEETTTCCEEEEEE
T ss_pred -------CCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEeccccc---CCCCeEEEEECCCCcEEEEEc
Confidence 2469999998774 87532 21111 1122335678988875432110 114578999999875 8765
Q ss_pred CC
Q 018336 269 EN 270 (358)
Q Consensus 269 ~~ 270 (358)
..
T Consensus 200 ~~ 201 (599)
T 1w6s_A 200 AT 201 (599)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 121
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=92.27 E-value=4.2 Score=34.36 Aligned_cols=102 Identities=13% Similarity=0.011 Sum_probs=48.9
Q ss_pred ceEEEEeCCCCCeeecCCCCCCC--CCCCceeEEEEE--CCEEEEEcCcC---CCCCC-CcceeEEEECCCCcEEeCCCC
Q 018336 102 YGVTVFDPVSLTWDRLGPVPEYP--AGLPLFCQVASS--QGKLVVMGGWD---PASYS-PVSHVFVYDFTTRRWTRGKNM 173 (358)
Q Consensus 102 ~~~~~~d~~~~~W~~~~~~~~~~--~~~~~~~~~~~~--~~~lyv~Gg~~---~~~~~-~~~~~~~yd~~t~~W~~~~~~ 173 (358)
..+..+|..+++-...-..+.+. ..... .++.. +..+|+..... ..... ....+++||..+.+....-..
T Consensus 56 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~ 133 (337)
T 1pby_B 56 ESLVKIDLVTGETLGRIDLSTPEERVKSLF--GAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA 133 (337)
T ss_dssp TEEEEEETTTCCEEEEEECCBTTEEEECTT--CEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC
T ss_pred CeEEEEECCCCCeEeeEEcCCccccccccc--ceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC
Confidence 36889999887754322221100 00011 22222 34677764210 00000 135899999988765432111
Q ss_pred CCCceeeeeEE-ECC-EEEEEcCcCCCCCCCCeEEEEECCCCceE
Q 018336 174 PDNRSFFAAGE-LNG-RVIIAGGHDENKTALSSAWAYDLIKDEWT 216 (358)
Q Consensus 174 ~~~~~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~~yd~~t~~W~ 216 (358)
+. .....+. -++ .+|+.. ..+.+||+.+++-.
T Consensus 134 ~~--~~~~~~~s~dg~~l~~~~---------~~i~~~d~~~~~~~ 167 (337)
T 1pby_B 134 PR--QITMLAWARDGSKLYGLG---------RDLHVMDPEAGTLV 167 (337)
T ss_dssp CS--SCCCEEECTTSSCEEEES---------SSEEEEETTTTEEE
T ss_pred CC--CcceeEECCCCCEEEEeC---------CeEEEEECCCCcEe
Confidence 11 1122222 234 466662 35899999887644
No 122
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=92.21 E-value=0.65 Score=45.41 Aligned_cols=106 Identities=8% Similarity=0.137 Sum_probs=61.8
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEEE--C--CEEEEEcCcCCCCCCCCeEEEEECCC
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGEL--N--GRVIIAGGHDENKTALSSAWAYDLIK 212 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~yd~~t 212 (358)
++..++.|+.+ ..+.+||..+.++..+..+......-..... + +..++.|+.+. .+.+||..+
T Consensus 20 dg~~latg~~d-------g~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg------~I~vwd~~~ 86 (753)
T 3jro_A 20 YGKRLATCSSD-------KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG------KVLIWKEEN 86 (753)
T ss_dssp SSCCEEEEETT-------TEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTS------CEEEEEEET
T ss_pred CCCeEEEEECC-------CcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCC------eEEEEECCC
Confidence 45555566532 3688888887777665444332222222222 2 56677776543 499999999
Q ss_pred CceEecCCCccCcCceeEEEE--C--CEEEEEeCcccCCCCceeeeeEEEECCCC
Q 018336 213 DEWTELARMTQERDECEAVVI--G--SEFWVVSGYKTERQGIFDESAESYQLGTG 263 (358)
Q Consensus 213 ~~W~~~~~~p~~~~~~~~~~~--~--~~lyv~gG~~~~~~~~~~~~i~~yd~~~~ 263 (358)
+.|..+..+.........+.+ + +.++++|+.+ ..+..||..++
T Consensus 87 ~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~d--------g~I~vwdl~~~ 133 (753)
T 3jro_A 87 GRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD--------GKVSVVEFKEN 133 (753)
T ss_dssp TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT--------SEEEEEECCSS
T ss_pred CcccccccccCCCCCeEEEEECCCCCCCEEEEEeCC--------CcEEEEEeecC
Confidence 888766544433333333333 2 6677777653 35778888765
No 123
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=92.14 E-value=3.9 Score=39.30 Aligned_cols=120 Identities=14% Similarity=0.159 Sum_probs=69.9
Q ss_pred eeEEECCEEEEEcCcCCCCCCCCeEEEEECCCC--ceEecCCCccC--------cCceeEEEECCEEEEEeCcccCCCCc
Q 018336 181 AAGELNGRVIIAGGHDENKTALSSAWAYDLIKD--EWTELARMTQE--------RDECEAVVIGSEFWVVSGYKTERQGI 250 (358)
Q Consensus 181 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~--~W~~~~~~p~~--------~~~~~~~~~~~~lyv~gG~~~~~~~~ 250 (358)
+.++.++.+|+... ...++++|..++ .|+.-...+.. ......++.+++||+...
T Consensus 61 ~P~v~~g~vyv~~~-------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-------- 125 (668)
T 1kv9_A 61 TPLFHDGVIYTSMS-------WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL-------- 125 (668)
T ss_dssp CCEEETTEEEEEEG-------GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT--------
T ss_pred CCEEECCEEEEECC-------CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC--------
Confidence 34567999999853 246999998776 48865433211 011234567888888642
Q ss_pred eeeeeEEEECCCCc--eEEcCCccccCCCCCceeeeeecCccCceeccccceeeceEEEEeCCeEEEECCCCC-CCCceE
Q 018336 251 FDESAESYQLGTGE--WKRAENAWKLSQCPRSNVGVGREGKLFCWAETEAAVQFGTCRVELGGCTLVTGSGYQ-GGPQEF 327 (358)
Q Consensus 251 ~~~~i~~yd~~~~~--W~~~~~~p~~~~~~~~~~~~~~d~~~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~-~~~~~i 327 (358)
...++++|..+++ |+.-..-+... . ....+.+..+++||+-.+... +....+
T Consensus 126 -dg~l~alD~~tG~~~W~~~~~~~~~~--~----------------------~~~~~P~v~~~~v~vg~~~~~~~~~g~v 180 (668)
T 1kv9_A 126 -DGRLIALDAKTGKAIWSQQTTDPAKP--Y----------------------SITGAPRVVKGKVIIGNGGAEYGVRGFV 180 (668)
T ss_dssp -TSEEEEEETTTCCEEEEEECSCTTSS--C----------------------BCCSCCEEETTEEEECCBCTTTCCBCEE
T ss_pred -CCEEEEEECCCCCEeeeeccCCCCCc--c----------------------eecCCCEEECCEEEEeCCCCCcCCCCEE
Confidence 2367899998875 87643211000 0 000112456888877533211 112579
Q ss_pred EEEECCCCc--eEee
Q 018336 328 YVVEGRNGK--FRKF 340 (358)
Q Consensus 328 ~~yd~~~~~--W~~~ 340 (358)
+.||..+++ |+.-
T Consensus 181 ~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 181 SAYDADTGKLAWRFY 195 (668)
T ss_dssp EEEETTTCCEEEEEE
T ss_pred EEEECCCCcEEEEec
Confidence 999998776 8764
No 124
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=92.14 E-value=0.11 Score=45.98 Aligned_cols=107 Identities=10% Similarity=0.024 Sum_probs=44.0
Q ss_pred EEECCEEEEEcCcCCCCCCCcceeEEEECCCCc--EEeCCCCCCCceeeeeEEECCEEEEEcCcCCCCCCCCeEEEEECC
Q 018336 134 ASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRR--WTRGKNMPDNRSFFAAGELNGRVIIAGGHDENKTALSSAWAYDLI 211 (358)
Q Consensus 134 ~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~ 211 (358)
++.++.||+.+. ...++.+|..+.+ |+.-. . + .....+..++.+|+.++.+ ..++++|.+
T Consensus 6 ~v~~~~v~~gs~--------dg~v~a~d~~tG~~~W~~~~--~-~-~~s~p~~~~g~~~v~~s~d------g~l~a~d~~ 67 (369)
T 2hz6_A 6 TLPETLLFVSTL--------DGSLHAVSKRTGSIKWTLKE--D-P-VLQVPTHVEEPAFLPDPND------GSLYTLGSK 67 (369)
T ss_dssp --CTTEEEEEET--------TSEEEEEETTTCCEEEEEEC--C-C-SCCCC-----CCEEECTTT------CCEEEC---
T ss_pred eeeCCEEEEEcC--------CCEEEEEECCCCCEEEEecC--C-C-ceecceEcCCCEEEEeCCC------CEEEEEECC
Confidence 445677777653 2368899988764 65432 1 1 1122233466678776433 358999986
Q ss_pred CC--ceEecCCCccCcCceeEEEECCEEEEEeCcccCCCCceeeeeEEEECCCCc--eEE
Q 018336 212 KD--EWTELARMTQERDECEAVVIGSEFWVVSGYKTERQGIFDESAESYQLGTGE--WKR 267 (358)
Q Consensus 212 t~--~W~~~~~~p~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~--W~~ 267 (358)
++ .|+.-...+.......++..++.+|+ |+. ...+.++|+.+++ |+.
T Consensus 68 tG~~~w~~~~~~~~~~~~sp~~~~~~~v~~-g~~--------dg~v~a~D~~tG~~~w~~ 118 (369)
T 2hz6_A 68 NNEGLTKLPFTIPELVQASPCRSSDGILYM-GKK--------QDIWYVIDLLTGEKQQTL 118 (369)
T ss_dssp --CCSEECSCCHHHHHTTCSCC-----CCC-CEE--------EEEEEEECCC--------
T ss_pred CCceeeeeeccCccccccCceEecCCEEEE-EeC--------CCEEEEEECCCCcEEEEe
Confidence 54 56632222211111111124555554 221 3468899998764 653
No 125
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=92.13 E-value=4.6 Score=33.67 Aligned_cols=147 Identities=10% Similarity=0.064 Sum_probs=70.9
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEEECCEEEEEcCcCCCCCCCCeEEEEECCCCceE
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGELNGRVIIAGGHDENKTALSSAWAYDLIKDEWT 216 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~ 216 (358)
++..++.|+.+ ..+.+||.... -..+..............-++. ++.|+.+ ..+.+||..+.+-.
T Consensus 154 ~~~~l~~~~~d-------~~i~i~d~~~~-~~~~~~~~~~~i~~~~~~~~~~-~~~~~~d------g~i~i~d~~~~~~~ 218 (313)
T 3odt_A 154 SENKFLTASAD-------KTIKLWQNDKV-IKTFSGIHNDVVRHLAVVDDGH-FISCSND------GLIKLVDMHTGDVL 218 (313)
T ss_dssp TTTEEEEEETT-------SCEEEEETTEE-EEEECSSCSSCEEEEEEEETTE-EEEEETT------SEEEEEETTTCCEE
T ss_pred CCCEEEEEECC-------CCEEEEecCce-EEEEeccCcccEEEEEEcCCCe-EEEccCC------CeEEEEECCchhhh
Confidence 55566666543 36888883321 1222221112222222234666 5555533 35999999876432
Q ss_pred ecCCCccCcCce-eEEEE-CCEEEEEeCcccCCCCceeeeeEEEECCCCceEEcCCccccCCCCCceeeeeecCccCcee
Q 018336 217 ELARMTQERDEC-EAVVI-GSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRAENAWKLSQCPRSNVGVGREGKLFCWA 294 (358)
Q Consensus 217 ~~~~~p~~~~~~-~~~~~-~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~d~~~~~W~ 294 (358)
.. +....... .++.. +++ ++.|+. -..+..||..+++-...-..+. . .
T Consensus 219 ~~--~~~~~~~i~~~~~~~~~~-l~~~~~--------dg~v~iwd~~~~~~~~~~~~~~----~-~-------------- 268 (313)
T 3odt_A 219 RT--YEGHESFVYCIKLLPNGD-IVSCGE--------DRTVRIWSKENGSLKQVITLPA----I-S-------------- 268 (313)
T ss_dssp EE--EECCSSCEEEEEECTTSC-EEEEET--------TSEEEEECTTTCCEEEEEECSS----S-C--------------
T ss_pred hh--hhcCCceEEEEEEecCCC-EEEEec--------CCEEEEEECCCCceeEEEeccC----c-e--------------
Confidence 21 11111111 22222 443 444443 2357889988876433222110 0 0
Q ss_pred ccccceeeceEEEEeCCeEEEECCCCCCCCceEEEEECCCCceEee
Q 018336 295 ETEAAVQFGTCRVELGGCTLVTGSGYQGGPQEFYVVEGRNGKFRKF 340 (358)
Q Consensus 295 ~lp~~~r~~~~~~~~~~~i~v~gG~~~~~~~~i~~yd~~~~~W~~~ 340 (358)
........+++ ++.|+.+ ..|.+||..++++...
T Consensus 269 -------i~~~~~~~~~~-~~~~~~d----g~i~iw~~~~~~~~~~ 302 (313)
T 3odt_A 269 -------IWSVDCMSNGD-IIVGSSD----NLVRIFSQEKSRWASE 302 (313)
T ss_dssp -------EEEEEECTTSC-EEEEETT----SCEEEEESCGGGCCC-
T ss_pred -------EEEEEEccCCC-EEEEeCC----CcEEEEeCCCCceeeh
Confidence 01112334566 4556554 5899999999887665
No 126
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=91.97 E-value=3.2 Score=35.31 Aligned_cols=35 Identities=14% Similarity=0.209 Sum_probs=22.6
Q ss_pred EEeCCeEEEECCCCCCCCceEEEEECC-CCceEee-cCCCC
Q 018336 307 VELGGCTLVTGSGYQGGPQEFYVVEGR-NGKFRKF-DVPAE 345 (358)
Q Consensus 307 ~~~~~~i~v~gG~~~~~~~~i~~yd~~-~~~W~~~-~~p~~ 345 (358)
...++++++.||.+ ..|.+|+.. .+.|..+ .+...
T Consensus 270 ~sp~g~~las~~~D----~~v~lw~~~~~g~~~~~~~~~~~ 306 (316)
T 3bg1_A 270 WSITANILAVSGGD----NKVTLWKESVDGQWVCISDVNKG 306 (316)
T ss_dssp ECTTTCCEEEEESS----SCEEEEEECTTSCEEEEEECC--
T ss_pred EcCCCCEEEEEcCC----CeEEEEEECCCCcEEEeeeccCC
Confidence 33457777777764 567777765 5679988 55543
No 127
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=91.93 E-value=3.9 Score=32.41 Aligned_cols=152 Identities=8% Similarity=0.050 Sum_probs=82.1
Q ss_pred eEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCC--cEE--eC----CCCCCCceeeeeEE---ECCEEEEEcCcCCCC
Q 018336 131 CQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTR--RWT--RG----KNMPDNRSFFAAGE---LNGRVIIAGGHDENK 199 (358)
Q Consensus 131 ~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~--~W~--~~----~~~~~~~~~~~~~~---~~~~iyv~GG~~~~~ 199 (358)
-+++..++.+|++-| +.+|+++.... ... .+ +.+|.. ..+|. .++++|++-|
T Consensus 10 DAi~~~~g~~yfFkg---------~~~Wr~~~~~~~~~~~p~~Is~~w~glP~~---IDAa~~~~~~~~~yfFkG----- 72 (195)
T 1itv_A 10 DAIAEIGNQLYLFKD---------GKYWRFSEGRGSRPQGPFLIADKWPALPRK---LDSVFEEPLSKKLFFFSG----- 72 (195)
T ss_dssp SEEEEETTEEEEEET---------TEEEEECCSSSCCCEEEEEHHHHCTTSCSS---CSEEEECTTTCCEEEEET-----
T ss_pred CEEEEeCCEEEEEEC---------CEEEEEECCccccCCCcEEhhhccCCCCCC---ccEEEEECCCCeEEEEeC-----
Confidence 366778999999976 36888877552 221 11 334432 22232 2678999865
Q ss_pred CCCCeEEEEECCCCc-eEecC--CCccCcCceeEE--EECCEEEEEeCcccCCCCceeeeeEEEECCCCceEEcCCcccc
Q 018336 200 TALSSAWAYDLIKDE-WTELA--RMTQERDECEAV--VIGSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRAENAWKL 274 (358)
Q Consensus 200 ~~~~~~~~yd~~t~~-W~~~~--~~p~~~~~~~~~--~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~~~p~~ 274 (358)
+..++|+..+.. =+.+. .+|.......++ ..++++|++-|. ..+.||..+++-. ..-|
T Consensus 73 ---~~yw~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg~----------~ywr~d~~~~~~~--~gyP-- 135 (195)
T 1itv_A 73 ---RQVWVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSGR----------RLWRFDVKAQMVD--PRSA-- 135 (195)
T ss_dssp ---TEEEEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEETT----------EEEEEETTTTEEC--GGGC--
T ss_pred ---CEEEEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeCC----------EEEEEeCCccccc--CCCc--
Confidence 346777654211 11121 223211122233 236889999764 3478988765321 1111
Q ss_pred CCCCCceeeeeecCccCceeccccceeeceEEEEeCCeEEEECCCCCCCCceEEEEECCCCce
Q 018336 275 SQCPRSNVGVGREGKLFCWAETEAAVQFGTCRVELGGCTLVTGSGYQGGPQEFYVVEGRNGKF 337 (358)
Q Consensus 275 ~~~~~~~~~~~~d~~~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~~~~~~i~~yd~~~~~W 337 (358)
+. -.+.|..+|..+ -++...++.+|++-| +..|+||..+.+=
T Consensus 136 ----r~--------i~~~w~Gvp~~i---daa~~~~g~~Yffkg------~~y~~~~~~~~~v 177 (195)
T 1itv_A 136 ----SE--------VDRMFPGVPLDT---HDVFQFREKAYFCQD------RFYWRVSSRSELN 177 (195)
T ss_dssp ----EE--------HHHHSTTSCSSC---SEEEEETTEEEEEET------TEEEEEECCTTCC
T ss_pred ----cC--------hhhcCCCCCCCC---CEEEEeCCeEEEEeC------CEEEEEECCccEE
Confidence 10 011343344321 123445799999988 4899999887753
No 128
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=91.91 E-value=2.1 Score=36.86 Aligned_cols=103 Identities=9% Similarity=0.019 Sum_probs=53.7
Q ss_pred eeEEEECCCCcEEeCCCCCCCceeeeeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCc-CceeEE-E
Q 018336 156 HVFVYDFTTRRWTRGKNMPDNRSFFAAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQER-DECEAV-V 232 (358)
Q Consensus 156 ~~~~yd~~t~~W~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~-~~~~~~-~ 232 (358)
.+|.+|..++++..+........-..++. -++++|+.+.... ...+.+|++.++.++.+....... ....++ .
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~~----~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~s 94 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKEDD----EGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVD 94 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEETT----EEEEEEEEEETTEEEEEEEEEEESCCCSEEEEE
T ss_pred EEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecCC----CceEEEEEecCCcEEEeeeeecCCCCCEEEEEC
Confidence 57777888888766432111111112222 3677887753211 246999999888877665432211 112233 3
Q ss_pred ECCE-EEEEeCcccCCCCceeeeeEEEECC-CCceEEcCC
Q 018336 233 IGSE-FWVVSGYKTERQGIFDESAESYQLG-TGEWKRAEN 270 (358)
Q Consensus 233 ~~~~-lyv~gG~~~~~~~~~~~~i~~yd~~-~~~W~~~~~ 270 (358)
-+|+ ||+.+.. ...+.+||.. +++...+..
T Consensus 95 pdg~~l~~~~~~--------~~~v~v~~~~~~g~~~~~~~ 126 (347)
T 3hfq_A 95 EARQLVYSANYH--------KGTAEVMKIAADGALTLTDT 126 (347)
T ss_dssp TTTTEEEEEETT--------TTEEEEEEECTTSCEEEEEE
T ss_pred CCCCEEEEEeCC--------CCEEEEEEeCCCCCeeecce
Confidence 3555 6665422 2356778774 445544443
No 129
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=91.87 E-value=8.7 Score=36.34 Aligned_cols=108 Identities=18% Similarity=0.147 Sum_probs=58.2
Q ss_pred eEEEEeC-CCCC--eeecCCCCCCCC----CCCceeEEEE--ECCE----EEEEcCcCCCCCCCcceeEEEECCCCc--E
Q 018336 103 GVTVFDP-VSLT--WDRLGPVPEYPA----GLPLFCQVAS--SQGK----LVVMGGWDPASYSPVSHVFVYDFTTRR--W 167 (358)
Q Consensus 103 ~~~~~d~-~~~~--W~~~~~~~~~~~----~~~~~~~~~~--~~~~----lyv~Gg~~~~~~~~~~~~~~yd~~t~~--W 167 (358)
.++++|. .+++ |+.-...+.... ........+. .++. ||+... ...++.+|..|.+ |
T Consensus 74 ~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~--------dg~l~AlDa~TG~~~W 145 (599)
T 1w6s_A 74 NTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL--------DGNVAALNAETGETVW 145 (599)
T ss_dssp CEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT--------TSEEEEEETTTCCEEE
T ss_pred EEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC--------CCEEEEEECCCCCEEE
Confidence 6889999 7775 876544321000 0000112344 4666 887643 2378999998875 7
Q ss_pred EeC-CCCCCC-ceeeeeEEECCEEEEEcCcCCCCCCCCeEEEEECCCCc--eEecC
Q 018336 168 TRG-KNMPDN-RSFFAAGELNGRVIIAGGHDENKTALSSAWAYDLIKDE--WTELA 219 (358)
Q Consensus 168 ~~~-~~~~~~-~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~ 219 (358)
+.- ...... ....+.++.++.+|+..+..+. .....+..||.+|++ |+.-.
T Consensus 146 ~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~-g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 146 KVENSDIKVGSTLTIAPYVVKDKVIIGSSGAEL-GVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp EEECCCGGGTCBCCSCCEEETTEEEECCBCGGG-TCCCEEEEEETTTCCEEEEEES
T ss_pred eecCCCCCccceeecCCEEECCEEEEEeccccc-CCCCeEEEEECCCCcEEEEEcC
Confidence 653 221100 1112334568888764422111 123579999998765 87543
No 130
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=91.83 E-value=2.7 Score=35.95 Aligned_cols=191 Identities=12% Similarity=-0.026 Sum_probs=92.2
Q ss_pred eEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEE--CCEEEEEcCcCCCC----------CCCcceeEEEECCCCcEEeC
Q 018336 103 GVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASS--QGKLVVMGGWDPAS----------YSPVSHVFVYDFTTRRWTRG 170 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~--~~~lyv~Gg~~~~~----------~~~~~~~~~yd~~t~~W~~~ 170 (358)
.+..||+.++....+........ ......++.. ++.||+........ ......+++||+.+.+.+.+
T Consensus 102 ~i~~~d~~~g~~~~~~~~~~~~~-~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~ 180 (322)
T 2fp8_A 102 HLSVVGSEGGHATQLATSVDGVP-FKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLL 180 (322)
T ss_dssp EEEEECTTCEECEEEESEETTEE-CSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEE
T ss_pred CEEEEeCCCCEEEEecccCCCCc-ccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEe
Confidence 47788888765544432111000 0112233333 57899875321000 01235799999988776543
Q ss_pred C-CCCCCceeeeeEEE-C-CEEEEEcCcCCCCCCCCeEEEEECCCC---ceEecCCCccCcCceeEEEE--CCEEEEEeC
Q 018336 171 K-NMPDNRSFFAAGEL-N-GRVIIAGGHDENKTALSSAWAYDLIKD---EWTELARMTQERDECEAVVI--GSEFWVVSG 242 (358)
Q Consensus 171 ~-~~~~~~~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~yd~~t~---~W~~~~~~p~~~~~~~~~~~--~~~lyv~gG 242 (358)
. .+..+ .+.+.- + +.+|+.-.. ...+.+|++... ..+.+..++. ...+.+ +|+|||...
T Consensus 181 ~~~~~~p---~gia~~~dg~~lyv~d~~------~~~I~~~~~~~~~~~~~~~~~~~~g----P~gi~~d~~G~l~va~~ 247 (322)
T 2fp8_A 181 LKELHVP---GGAEVSADSSFVLVAEFL------SHQIVKYWLEGPKKGTAEVLVKIPN----PGNIKRNADGHFWVSSS 247 (322)
T ss_dssp EEEESCC---CEEEECTTSSEEEEEEGG------GTEEEEEESSSTTTTCEEEEEECSS----EEEEEECTTSCEEEEEE
T ss_pred ccCCccC---cceEECCCCCEEEEEeCC------CCeEEEEECCCCcCCccceEEeCCC----CCCeEECCCCCEEEEec
Confidence 2 11111 122332 3 358887321 257999998752 3443333322 223333 467888864
Q ss_pred cccCCC--CceeeeeEEEECCCCceEEcCCccccCCCCCceeeeeecCccCceeccccceeeceEEEEeCCeEEEECCCC
Q 018336 243 YKTERQ--GIFDESAESYQLGTGEWKRAENAWKLSQCPRSNVGVGREGKLFCWAETEAAVQFGTCRVELGGCTLVTGSGY 320 (358)
Q Consensus 243 ~~~~~~--~~~~~~i~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~d~~~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~ 320 (358)
...... ......+.+||+....-..+.. |... .. ....+++..+++|||.....
T Consensus 248 ~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~-~~g~-~~----------------------~~~~~~~~~~g~L~v~~~~~ 303 (322)
T 2fp8_A 248 EELDGNMHGRVDPKGIKFDEFGNILEVIPL-PPPF-AG----------------------EHFEQIQEHDGLLYIGTLFH 303 (322)
T ss_dssp EETTSSTTSCEEEEEEEECTTSCEEEEEEC-CTTT-TT----------------------SCCCEEEEETTEEEEECSSC
T ss_pred CcccccccCCCccEEEEECCCCCEEEEEEC-CCCC-cc----------------------ccceEEEEeCCEEEEeecCC
Confidence 310000 0013468889986443333332 1100 00 11122345689999986543
Q ss_pred CCCCceEEEEECCCC
Q 018336 321 QGGPQEFYVVEGRNG 335 (358)
Q Consensus 321 ~~~~~~i~~yd~~~~ 335 (358)
+.|.+|++..+
T Consensus 304 ----~~i~~~~~~~~ 314 (322)
T 2fp8_A 304 ----GSVGILVYDKK 314 (322)
T ss_dssp ----SEEEEEEC---
T ss_pred ----CceEEEecccc
Confidence 68889987644
No 131
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=91.79 E-value=6.1 Score=38.12 Aligned_cols=121 Identities=17% Similarity=0.209 Sum_probs=70.2
Q ss_pred eeEEECCEEEEEcCcCCCCCCCCeEEEEECCCC--ceEecCCCccC--------cCceeEEEECCEEEEEeCcccCCCCc
Q 018336 181 AAGELNGRVIIAGGHDENKTALSSAWAYDLIKD--EWTELARMTQE--------RDECEAVVIGSEFWVVSGYKTERQGI 250 (358)
Q Consensus 181 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~--~W~~~~~~p~~--------~~~~~~~~~~~~lyv~gG~~~~~~~~ 250 (358)
+.++.++.+|+... ...++++|..++ .|+.-...+.. ....+.++.+++||+...
T Consensus 65 ~P~v~~g~vyv~~~-------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~-------- 129 (689)
T 1yiq_A 65 TPIVVDGVMYTTGP-------FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL-------- 129 (689)
T ss_dssp CCEEETTEEEEECG-------GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT--------
T ss_pred cCEEECCEEEEEcC-------CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc--------
Confidence 33567999999753 245999998776 49864433211 111234577888888652
Q ss_pred eeeeeEEEECCCCc--eEEcCCccccCCCCCceeeeeecCccCceeccccceeeceEEEEeCCeEEEECCCCC-CCCceE
Q 018336 251 FDESAESYQLGTGE--WKRAENAWKLSQCPRSNVGVGREGKLFCWAETEAAVQFGTCRVELGGCTLVTGSGYQ-GGPQEF 327 (358)
Q Consensus 251 ~~~~i~~yd~~~~~--W~~~~~~p~~~~~~~~~~~~~~d~~~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~-~~~~~i 327 (358)
...++++|..+++ |+.-....... .. ....+.+..++++|+-.+... +....+
T Consensus 130 -dg~l~AlDa~TG~~~W~~~~~~~~~~-~~----------------------~~~~sP~v~~g~v~vg~~~~~~~~~g~v 185 (689)
T 1yiq_A 130 -DGRLEAIDAKTGQRAWSVDTRADHKR-SY----------------------TITGAPRVVNGKVVIGNGGAEFGVRGYV 185 (689)
T ss_dssp -TSEEEEEETTTCCEEEEEECCSCTTS-CC----------------------BCCSCCEEETTEEEECCBCTTTCCBCEE
T ss_pred -CCEEEEEECCCCCEeeeecCcCCCCC-Cc----------------------cccCCcEEECCEEEEEeCCCccCCCCEE
Confidence 2357899998875 87644210000 00 000112456888877433211 112589
Q ss_pred EEEECCCCc--eEee
Q 018336 328 YVVEGRNGK--FRKF 340 (358)
Q Consensus 328 ~~yd~~~~~--W~~~ 340 (358)
+.||..+++ |+.-
T Consensus 186 ~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 186 TAYDAETGKEAWRFY 200 (689)
T ss_dssp EEEETTTCCEEEEEE
T ss_pred EEEECCCCcEEEEec
Confidence 999999877 8754
No 132
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=91.59 E-value=4.6 Score=39.35 Aligned_cols=134 Identities=12% Similarity=0.161 Sum_probs=65.1
Q ss_pred eEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEe-CCCCCCCceeee
Q 018336 103 GVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTR-GKNMPDNRSFFA 181 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~-~~~~~~~~~~~~ 181 (358)
.+..||..+++....-..... ........-++..++.|+.+ ..+.+||..+++... +...... -.+
T Consensus 36 ~v~iwd~~~~~~~~~~~~~~~----~v~~~~~s~~~~~l~~~~~d-------g~i~vw~~~~~~~~~~~~~~~~~--v~~ 102 (814)
T 3mkq_A 36 RVEIWNYETQVEVRSIQVTET----PVRAGKFIARKNWIIVGSDD-------FRIRVFNYNTGEKVVDFEAHPDY--IRS 102 (814)
T ss_dssp EEEEEETTTTEEEEEEECCSS----CEEEEEEEGGGTEEEEEETT-------SEEEEEETTTCCEEEEEECCSSC--EEE
T ss_pred EEEEEECCCCceEEEEecCCC----cEEEEEEeCCCCEEEEEeCC-------CeEEEEECCCCcEEEEEecCCCC--EEE
Confidence 678899887654332111110 11212223355566666532 378999998876543 2211111 111
Q ss_pred eEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCce-eEEEE--CCEEEEEeCcccCCCCceeeeeEE
Q 018336 182 AGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDEC-EAVVI--GSEFWVVSGYKTERQGIFDESAES 257 (358)
Q Consensus 182 ~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~-~~~~~--~~~lyv~gG~~~~~~~~~~~~i~~ 257 (358)
++. -++..++.|+.+ ..+.+||..++ |.....+....... .++.. ++.++++|+.+ ..+..
T Consensus 103 ~~~s~~~~~l~~~~~d------g~i~vw~~~~~-~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d--------g~v~v 167 (814)
T 3mkq_A 103 IAVHPTKPYVLSGSDD------LTVKLWNWENN-WALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD--------RTVKV 167 (814)
T ss_dssp EEECSSSSEEEEEETT------SEEEEEEGGGT-SEEEEEEECCSSCEEEEEEETTEEEEEEEEETT--------SEEEE
T ss_pred EEEeCCCCEEEEEcCC------CEEEEEECCCC-ceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCC--------CeEEE
Confidence 222 245455555433 35889998765 22222111111112 22233 45677776543 35778
Q ss_pred EECCCCc
Q 018336 258 YQLGTGE 264 (358)
Q Consensus 258 yd~~~~~ 264 (358)
||..+.+
T Consensus 168 wd~~~~~ 174 (814)
T 3mkq_A 168 WSLGQST 174 (814)
T ss_dssp EETTCSS
T ss_pred EECCCCc
Confidence 8886543
No 133
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=91.50 E-value=4.8 Score=38.21 Aligned_cols=158 Identities=8% Similarity=-0.005 Sum_probs=80.9
Q ss_pred cceeEEEECCC------CcEEeCC-CCCCCceeeeeEE-ECCE-EEEEcCcCCCCC-CCCeEEEEECC-CCceEecCCCc
Q 018336 154 VSHVFVYDFTT------RRWTRGK-NMPDNRSFFAAGE-LNGR-VIIAGGHDENKT-ALSSAWAYDLI-KDEWTELARMT 222 (358)
Q Consensus 154 ~~~~~~yd~~t------~~W~~~~-~~~~~~~~~~~~~-~~~~-iyv~GG~~~~~~-~~~~~~~yd~~-t~~W~~~~~~p 222 (358)
...++++|..+ ...+.+. .-. ......+. -+++ |++......... ....++++|.. ++.+.....+.
T Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~ 237 (662)
T 3azo_A 160 RRFLAAVPLDGSAAADRSAVRELSDDAH--RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLL 237 (662)
T ss_dssp EEEEEEEETTSTTTTCGGGSEESSCSCS--SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEE
T ss_pred eeEEEEEECCCCccccCCceeEEEecCC--CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeC
Confidence 36899999988 6666554 211 11111222 2454 544432211110 13579999998 56433322222
Q ss_pred cC-cCc-eeEE-EECCEEEEEeCcccCCCCceeeeeEEEECCCCceEEcCCccccCCCCCceeeeeecCccCceeccccc
Q 018336 223 QE-RDE-CEAV-VIGSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRAENAWKLSQCPRSNVGVGREGKLFCWAETEAA 299 (358)
Q Consensus 223 ~~-~~~-~~~~-~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~d~~~~~W~~lp~~ 299 (358)
.. ... .... .-||++|+.+...+ ...++.+|+.++++..+......... ..|..-
T Consensus 238 ~~~~~~~~~~~~spdg~l~~~~~~~~------~~~l~~~~~~~~~~~~l~~~~~~~~~-------------p~w~~~--- 295 (662)
T 3azo_A 238 GGPEEAIAQAEWAPDGSLIVATDRTG------WWNLHRVDPATGAATQLCRREEEFAG-------------PLWTPG--- 295 (662)
T ss_dssp EETTBCEEEEEECTTSCEEEEECTTS------SCEEEEECTTTCCEEESSCCSSBSSC-------------CCCSTT---
T ss_pred CCCCceEcceEECCCCeEEEEECCCC------CeEEEEEECCCCceeecccccccccC-------------cccccc---
Confidence 11 111 1222 23788877765431 23688999988889877653211100 011000
Q ss_pred eeeceEEEEeCCeEEEECCCCCCCCceEEEEECCCCceEee
Q 018336 300 VQFGTCRVELGGCTLVTGSGYQGGPQEFYVVEGRNGKFRKF 340 (358)
Q Consensus 300 ~r~~~~~~~~~~~i~v~gG~~~~~~~~i~~yd~~~~~W~~~ 340 (358)
.......-++++++.+.. +...+|.+|..+++.+.+
T Consensus 296 --~~~~~~~~~~~~~~~~~~---~~~~l~~~d~~~~~~~~l 331 (662)
T 3azo_A 296 --MRWFAPLANGLIAVVHGK---GAAVLGILDPESGELVDA 331 (662)
T ss_dssp --CCSEEECTTSCEEEEEBS---SSCEEEEEETTTTEEEEC
T ss_pred --CceEeEeCCCEEEEEEEc---CccEEEEEECCCCcEEEe
Confidence 000112236777776654 226889999988877776
No 134
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=91.30 E-value=7 Score=34.14 Aligned_cols=105 Identities=7% Similarity=0.085 Sum_probs=50.4
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCc--------------eeeeeEEECCEEEEEcCcCCCCCCC
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNR--------------SFFAAGELNGRVIIAGGHDENKTAL 202 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~--------------~~~~~~~~~~~iyv~GG~~~~~~~~ 202 (358)
++..++.++.+ ..+.+||..+.+....-...... ....++...+..+++|+.+
T Consensus 160 ~~~~l~~~~~d-------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 226 (425)
T 1r5m_A 160 DGTHIISMDVE-------NVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPK------ 226 (425)
T ss_dssp TSSEEEEEETT-------CCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGG------
T ss_pred CCCEEEEEecC-------CeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCC------
Confidence 45555555532 36889999877654321111111 0122222223345555543
Q ss_pred CeEEEEECCCCceEe-cCCCccCcCceeEE-EECCEEEEEeCcccCCCCceeeeeEEEECCCCc
Q 018336 203 SSAWAYDLIKDEWTE-LARMTQERDECEAV-VIGSEFWVVSGYKTERQGIFDESAESYQLGTGE 264 (358)
Q Consensus 203 ~~~~~yd~~t~~W~~-~~~~p~~~~~~~~~-~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~ 264 (358)
..+.+||..++.-.. +..... .-..+. .-++++++.|+.+ ..+..||..+.+
T Consensus 227 g~i~~~d~~~~~~~~~~~~~~~--~i~~~~~~~~~~~l~~~~~d--------~~i~i~d~~~~~ 280 (425)
T 1r5m_A 227 GAIFVYQITEKTPTGKLIGHHG--PISVLEFNDTNKLLLSASDD--------GTLRIWHGGNGN 280 (425)
T ss_dssp GCEEEEETTCSSCSEEECCCSS--CEEEEEEETTTTEEEEEETT--------SCEEEECSSSBS
T ss_pred CeEEEEEcCCCceeeeeccCCC--ceEEEEECCCCCEEEEEcCC--------CEEEEEECCCCc
Confidence 359999998763221 111111 111222 2256666666542 356788887653
No 135
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=91.29 E-value=2.1 Score=37.85 Aligned_cols=105 Identities=13% Similarity=0.261 Sum_probs=55.3
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEEE-CCEEEEEcCcCCCCCCCCeEEEEECCCCce
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGEL-NGRVIIAGGHDENKTALSSAWAYDLIKDEW 215 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W 215 (358)
++..++.|+.+ ..+.+||..+.+-...-.- ....-.+++.. ++..++.|+.+ ..+.+||..++..
T Consensus 134 dg~~l~s~~~d-------~~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~s~s~d------~~v~iwd~~~~~~ 199 (393)
T 1erj_A 134 DGKFLATGAED-------RLIRIWDIENRKIVMILQG-HEQDIYSLDYFPSGDKLVSGSGD------RTVRIWDLRTGQC 199 (393)
T ss_dssp TSSEEEEEETT-------SCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETT------SEEEEEETTTTEE
T ss_pred CCCEEEEEcCC-------CeEEEEECCCCcEEEEEcc-CCCCEEEEEEcCCCCEEEEecCC------CcEEEEECCCCee
Confidence 56666666643 3689999987754332110 11111122222 45555565543 3588999988764
Q ss_pred EecCCCccCcCceeEEEE--CCEEEEEeCcccCCCCceeeeeEEEECCCCce
Q 018336 216 TELARMTQERDECEAVVI--GSEFWVVSGYKTERQGIFDESAESYQLGTGEW 265 (358)
Q Consensus 216 ~~~~~~p~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W 265 (358)
...-.... ....++.. ++++++.|+.+ ..+..||..++.-
T Consensus 200 ~~~~~~~~--~v~~~~~~~~~~~~l~~~s~d--------~~v~iwd~~~~~~ 241 (393)
T 1erj_A 200 SLTLSIED--GVTTVAVSPGDGKYIAAGSLD--------RAVRVWDSETGFL 241 (393)
T ss_dssp EEEEECSS--CEEEEEECSTTCCEEEEEETT--------SCEEEEETTTCCE
T ss_pred EEEEEcCC--CcEEEEEECCCCCEEEEEcCC--------CcEEEEECCCCcE
Confidence 43221111 11122222 66777777653 3467899887753
No 136
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=91.26 E-value=6.4 Score=33.62 Aligned_cols=130 Identities=7% Similarity=-0.028 Sum_probs=70.6
Q ss_pred eEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEE--CCEEEEEcCcCCCCCCCcceeEEEECCC----CcEEe-CC-CCC
Q 018336 103 GVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASS--QGKLVVMGGWDPASYSPVSHVFVYDFTT----RRWTR-GK-NMP 174 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~--~~~lyv~Gg~~~~~~~~~~~~~~yd~~t----~~W~~-~~-~~~ 174 (358)
.+..+|+.+.....+.+... ...+++.. ++.||+.... ...++++|+.+ ..... +. .+.
T Consensus 11 ~I~~i~~~~~~~~~~~~~~~------~p~g~~~d~~~~~ly~~D~~-------~~~I~~~~~~g~~~~~~~~~~~~~~~~ 77 (316)
T 1ijq_A 11 EVRKMTLDRSEYTSLIPNLR------NVVALDTEVASNRIYWSDLS-------QRMICSTQLDRAHGVSSYDTVISRDIQ 77 (316)
T ss_dssp SEEEEETTSCCCEEEECSCS------SEEEEEEETTTTEEEEEETT-------TTEEEEEEC--------CEEEECSSCS
T ss_pred eEEEEECCCcceEehhcCCC------ceEEEEEEeCCCEEEEEECC-------CCcEEEEECCCCCCCcccEEEEeCCCC
Confidence 57788888877655432111 12244443 5789998652 35799999876 22222 21 122
Q ss_pred CCceeeeeEE--ECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecC--CCccCcCceeEEE--ECCEEEEEeCcccCCC
Q 018336 175 DNRSFFAAGE--LNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELA--RMTQERDECEAVV--IGSEFWVVSGYKTERQ 248 (358)
Q Consensus 175 ~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~--~~p~~~~~~~~~~--~~~~lyv~gG~~~~~~ 248 (358)
.| .+.++ .++.||+.-.. ...++++++....-+.+. .+..+ ..+++ .++.||+.....
T Consensus 78 ~p---~glavd~~~~~ly~~d~~------~~~I~~~~~~g~~~~~~~~~~~~~P---~~iavdp~~g~ly~~d~~~---- 141 (316)
T 1ijq_A 78 AP---DGLAVDWIHSNIYWTDSV------LGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWGT---- 141 (316)
T ss_dssp CC---CEEEEETTTTEEEEEETT------TTEEEEEETTSSSEEEEEECTTCCE---EEEEEETTTTEEEEEECSS----
T ss_pred Cc---CEEEEeecCCeEEEEECC------CCEEEEEeCCCCceEEEEECCCCCc---ceEEeCCCCCEEEEEccCC----
Confidence 22 23444 47899998421 357889998765433332 22222 23333 367899886211
Q ss_pred CceeeeeEEEECCCCc
Q 018336 249 GIFDESAESYQLGTGE 264 (358)
Q Consensus 249 ~~~~~~i~~yd~~~~~ 264 (358)
...|++++++...
T Consensus 142 ---~~~I~~~~~dG~~ 154 (316)
T 1ijq_A 142 ---PAKIKKGGLNGVD 154 (316)
T ss_dssp ---SCEEEEEETTSCC
T ss_pred ---CCeEEEEcCCCCC
Confidence 2468888887543
No 137
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=91.24 E-value=2.2 Score=37.27 Aligned_cols=150 Identities=11% Similarity=0.026 Sum_probs=78.5
Q ss_pred cceeEEEECCCCcEEeCCCCCCCceeeeeEE-E-CCE-EEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCcee-
Q 018336 154 VSHVFVYDFTTRRWTRGKNMPDNRSFFAAGE-L-NGR-VIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECE- 229 (358)
Q Consensus 154 ~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~-~-~~~-iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~- 229 (358)
...++++|..+.+.+.+...+ ......+. - ++. |++... .........++.+|..+..++.+.. ..+.....
T Consensus 167 ~~~l~~~d~~~g~~~~~~~~~--~~~~~~~~sp~dg~~l~~~~~-~~~~~~~~~l~~~d~~~~~~~~l~~-~~~~~~~~~ 242 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIHQDT--AWLGHPIYRPFDDSTVGFCHE-GPHDLVDARMWLVNEDGSNVRKIKE-HAEGESCTH 242 (396)
T ss_dssp CEEEEEEETTTCCEEEEEEES--SCEEEEEEETTEEEEEEEEEC-SCSSSCSCCCEEEETTSCCCEESSC-CCTTEEEEE
T ss_pred cceEEEEECCCCcEEeeccCC--cccccceECCCCCCEEEEEec-CCCCCCCceEEEEECCCCceeEeec-cCCCccccc
Confidence 357899999988876654211 11111222 2 343 544432 1111122579999998888777654 11111111
Q ss_pred EE-EECCE-EEEEeCcccCCCCceeeeeEEEECCCCceEEcCCccccCCCCCceeeeeecCccCceeccccceeeceEEE
Q 018336 230 AV-VIGSE-FWVVSGYKTERQGIFDESAESYQLGTGEWKRAENAWKLSQCPRSNVGVGREGKLFCWAETEAAVQFGTCRV 307 (358)
Q Consensus 230 ~~-~~~~~-lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~d~~~~~W~~lp~~~r~~~~~~ 307 (358)
.. .-+|+ |++.. ..... ....++.+|+.+++...+...+.. . ...
T Consensus 243 ~~~spdg~~l~~~~-~~~~~---~~~~l~~~d~~~g~~~~l~~~~~~----------------------------~-~~~ 289 (396)
T 3c5m_A 243 EFWIPDGSAMAYVS-YFKGQ---TDRVIYKANPETLENEEVMVMPPC----------------------------S-HLM 289 (396)
T ss_dssp EEECTTSSCEEEEE-EETTT---CCEEEEEECTTTCCEEEEEECCSE----------------------------E-EEE
T ss_pred eEECCCCCEEEEEe-cCCCC---ccceEEEEECCCCCeEEeeeCCCC----------------------------C-CCc
Confidence 12 22565 44443 22111 123589999998877665543210 0 123
Q ss_pred Ee-CCeEEEECCCC------------CCCCceEEEEECCCCceEee
Q 018336 308 EL-GGCTLVTGSGY------------QGGPQEFYVVEGRNGKFRKF 340 (358)
Q Consensus 308 ~~-~~~i~v~gG~~------------~~~~~~i~~yd~~~~~W~~~ 340 (358)
.. +++++++.+.. ......++++|+.+++.+.+
T Consensus 290 s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l 335 (396)
T 3c5m_A 290 SNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKL 335 (396)
T ss_dssp ECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEE
T ss_pred cCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEc
Confidence 34 67766664321 11226899999998877666
No 138
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=91.19 E-value=5.2 Score=38.67 Aligned_cols=148 Identities=11% Similarity=-0.038 Sum_probs=79.6
Q ss_pred ECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCC--CCCCceeeeeEE--ECCEEEEEcCcCCCCCCCCeEEEEECC
Q 018336 136 SQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKN--MPDNRSFFAAGE--LNGRVIIAGGHDENKTALSSAWAYDLI 211 (358)
Q Consensus 136 ~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~--~~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~ 211 (358)
.++.||+.-.. ...++++++....-+.+.. +..|+ ++++ .++.||+.--. ....++++++.
T Consensus 463 ~~g~LY~tD~~-------~~~I~v~d~dg~~~~~l~~~~~~~P~---giavDp~~g~ly~td~~-----~~~~I~~~~~d 527 (699)
T 1n7d_A 463 IHSNIYWTDSV-------LGTVSVADTKGVKRKTLFREQGSKPR---AIVVDPVHGFMYWTDWG-----TPAKIKKGGLN 527 (699)
T ss_dssp SSSBCEECCTT-------TSCEEEEBSSSCCEEEECCCSSCCCC---CEECCSSSSCCEECCCS-----SSCCEEBCCSS
T ss_pred eCCcEEEEecc-------CCeEEEEecCCCceEEEEeCCCCCcc---eEEEccCCCcEEEcccC-----CCCeEEEEeCC
Confidence 46889987432 3478999988765554432 22222 2222 35778876411 12467777775
Q ss_pred CCceEecCCCccCcCceeEEEE---CCEEEEEeCcccCCCCceeeeeEEEECCCCceEEcCCccccCCCCCceeeeeecC
Q 018336 212 KDEWTELARMTQERDECEAVVI---GSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRAENAWKLSQCPRSNVGVGREG 288 (358)
Q Consensus 212 t~~W~~~~~~p~~~~~~~~~~~---~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~d~ 288 (358)
...-+.+... .......+++ +++||+.-.. ...|+++|+....-..+.......
T Consensus 528 G~~~~~l~~~--~l~~PnGlavd~~~~~LY~aD~~--------~~~I~~~d~dG~~~~~~~~~~~~~------------- 584 (699)
T 1n7d_A 528 GVDIYSLVTE--NIQWPNGITLDLLSGRLYWVDSK--------LHSISSIDVNGGNRKTILEDEKRL------------- 584 (699)
T ss_dssp SCCCCEESCS--SCSSCCCEEECTTTCCEEEEETT--------TTEEEEECSSSSCCEEECCCSSSC-------------
T ss_pred CCCeeEEEeC--CCCCccEEEEeccCCEEEEEecC--------CCeEEEEccCCCceEEEEecCCcC-------------
Confidence 4333322211 1111223333 5789998643 346888988754333332211000
Q ss_pred ccCceeccccceeeceEEEEeCCeEEEECCCCCCCCceEEEEECCCCce
Q 018336 289 KLFCWAETEAAVQFGTCRVELGGCTLVTGSGYQGGPQEFYVVEGRNGKF 337 (358)
Q Consensus 289 ~~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~~~~~~i~~yd~~~~~W 337 (358)
....+++..++.||+.-... ..|.++|+.+++-
T Consensus 585 ------------~~P~glavd~~~lywtd~~~----~~V~~~d~~~G~~ 617 (699)
T 1n7d_A 585 ------------AHPFSLAVFEDKVFWTDIIN----EAIFSANRLTGSD 617 (699)
T ss_dssp ------------SSCCCCEEETTEEEEECSTT----TCEEEEETTTEEE
T ss_pred ------------CCceEeEEECCEEEEEeCCC----CeEEEEEccCCCc
Confidence 01122455778999987433 5799999876553
No 139
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=91.14 E-value=7 Score=33.88 Aligned_cols=135 Identities=9% Similarity=0.049 Sum_probs=65.1
Q ss_pred eEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEE-C-CEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceee
Q 018336 103 GVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASS-Q-GKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFF 180 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~-~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~ 180 (358)
.+..||..+++-...-..... . -.+++.. + +.+++.++.+ ..+.+||..+.+-.............
T Consensus 162 ~v~iwd~~~~~~~~~~~~h~~----~-v~~v~~s~~~~~~~~s~~~d-------g~v~~wd~~~~~~~~~~~~~~~~~~v 229 (357)
T 4g56_B 162 SVKVWDLSQKAVLKSYNAHSS----E-VNCVAACPGKDTIFLSCGED-------GRILLWDTRKPKPATRIDFCASDTIP 229 (357)
T ss_dssp CEEEEETTTTEEEEEECCCSS----C-EEEEEECTTCSSCEEEEETT-------SCEEECCTTSSSCBCBCCCTTCCSCE
T ss_pred eEEEEECCCCcEEEEEcCCCC----C-EEEEEEccCCCceeeeeccC-------CceEEEECCCCceeeeeeeccccccc
Confidence 577888887754332111110 1 1123322 2 3466666643 36888998776543222221111112
Q ss_pred eeEEE---CCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEEE--CC-EEEEEeCcccCCCCceeee
Q 018336 181 AAGEL---NGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVVI--GS-EFWVVSGYKTERQGIFDES 254 (358)
Q Consensus 181 ~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~~-~lyv~gG~~~~~~~~~~~~ 254 (358)
..+.. ++.+++.|+.+ ..+.+||..+.+-. ..+.........+.+ ++ ++.+.|+.+ ..
T Consensus 230 ~~v~~sp~~~~~la~g~~d------~~i~~wd~~~~~~~--~~~~~~~~~v~~l~~sp~~~~~lasgs~D--------~~ 293 (357)
T 4g56_B 230 TSVTWHPEKDDTFACGDET------GNVSLVNIKNPDSA--QTSAVHSQNITGLAYSYHSSPFLASISED--------CT 293 (357)
T ss_dssp EEEEECTTSTTEEEEEESS------SCEEEEESSCGGGC--EEECCCSSCEEEEEECSSSSCCEEEEETT--------SC
T ss_pred cchhhhhcccceEEEeecc------cceeEEECCCCcEe--EEEeccceeEEEEEEcCCCCCEEEEEeCC--------CE
Confidence 22222 35677776544 34889998765321 111111111122222 44 455556542 25
Q ss_pred eEEEECCCCce
Q 018336 255 AESYQLGTGEW 265 (358)
Q Consensus 255 i~~yd~~~~~W 265 (358)
|.+||..+++-
T Consensus 294 i~iwd~~~~~~ 304 (357)
T 4g56_B 294 VAVLDADFSEV 304 (357)
T ss_dssp EEEECTTSCEE
T ss_pred EEEEECCCCcE
Confidence 67899887754
No 140
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=91.06 E-value=3.5 Score=36.66 Aligned_cols=148 Identities=16% Similarity=0.149 Sum_probs=74.8
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCce
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDEW 215 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W 215 (358)
++.+++.|+.+ ..+.+||..+.+....-..... .-.+++. -++.+++.|+.+. .+.+||..+..-
T Consensus 119 ~~~~l~s~s~D-------g~i~vwd~~~~~~~~~l~~h~~-~V~~v~~~~~~~~l~sgs~D~------~i~iwd~~~~~~ 184 (410)
T 1vyh_C 119 VFSVMVSASED-------ATIKVWDYETGDFERTLKGHTD-SVQDISFDHSGKLLASCSADM------TIKLWDFQGFEC 184 (410)
T ss_dssp SSSEEEEEESS-------SCEEEEETTTCCCCEEECCCSS-CEEEEEECTTSSEEEEEETTS------CCCEEETTSSCE
T ss_pred CCCEEEEEeCC-------CeEEEEECCCCcEEEEEeccCC-cEEEEEEcCCCCEEEEEeCCC------eEEEEeCCCCce
Confidence 45667777643 3688999887654221110011 1111222 2566777776553 377888876543
Q ss_pred EecCCCccCcCceeEEEE--CCEEEEEeCcccCCCCceeeeeEEEECCCCceEEcCCccccCCCCCceeeeeecCccCce
Q 018336 216 TELARMTQERDECEAVVI--GSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRAENAWKLSQCPRSNVGVGREGKLFCW 293 (358)
Q Consensus 216 ~~~~~~p~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~d~~~~~W 293 (358)
. ..+.........+.+ ++..++.|+.+ ..+..||..++.-... +. .....+
T Consensus 185 ~--~~~~~h~~~V~~v~~~p~~~~l~s~s~D--------~~i~~wd~~~~~~~~~--~~----~h~~~v----------- 237 (410)
T 1vyh_C 185 I--RTMHGHDHNVSSVSIMPNGDHIVSASRD--------KTIKMWEVQTGYCVKT--FT----GHREWV----------- 237 (410)
T ss_dssp E--ECCCCCSSCEEEEEECSSSSEEEEEETT--------SEEEEEETTTCCEEEE--EE----CCSSCE-----------
T ss_pred e--EEEcCCCCCEEEEEEeCCCCEEEEEeCC--------CeEEEEECCCCcEEEE--Ee----CCCccE-----------
Confidence 2 222211111222222 56666777653 3578899887653211 10 000000
Q ss_pred eccccceeeceEEEEeCCeEEEECCCCCCCCceEEEEECCCCceE
Q 018336 294 AETEAAVQFGTCRVELGGCTLVTGSGYQGGPQEFYVVEGRNGKFR 338 (358)
Q Consensus 294 ~~lp~~~r~~~~~~~~~~~i~v~gG~~~~~~~~i~~yd~~~~~W~ 338 (358)
.......++++++.|+.+ ..|.+||..+.+..
T Consensus 238 ---------~~~~~~~~g~~l~s~s~D----~~v~vwd~~~~~~~ 269 (410)
T 1vyh_C 238 ---------RMVRPNQDGTLIASCSND----QTVRVWVVATKECK 269 (410)
T ss_dssp ---------EEEEECTTSSEEEEEETT----SCEEEEETTTCCEE
T ss_pred ---------EEEEECCCCCEEEEEcCC----CeEEEEECCCCcee
Confidence 011223456777777765 56888888776543
No 141
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=91.06 E-value=5.4 Score=35.08 Aligned_cols=133 Identities=17% Similarity=0.196 Sum_probs=63.4
Q ss_pred eEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEE-CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeee
Q 018336 103 GVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASS-QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFA 181 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~ 181 (358)
.+..||..+.+-...- ..... .. .+++.. ++..++.|+.+ ..+.+||..+.+....-.... .-..
T Consensus 146 ~i~iwd~~~~~~~~~~--~~h~~--~v-~~~~~~p~~~~l~s~s~d-------~~v~iwd~~~~~~~~~~~~~~--~v~~ 211 (393)
T 1erj_A 146 LIRIWDIENRKIVMIL--QGHEQ--DI-YSLDYFPSGDKLVSGSGD-------RTVRIWDLRTGQCSLTLSIED--GVTT 211 (393)
T ss_dssp CEEEEETTTTEEEEEE--CCCSS--CE-EEEEECTTSSEEEEEETT-------SEEEEEETTTTEEEEEEECSS--CEEE
T ss_pred eEEEEECCCCcEEEEE--ccCCC--CE-EEEEEcCCCCEEEEecCC-------CcEEEEECCCCeeEEEEEcCC--CcEE
Confidence 5778888776543221 11110 11 122222 45555555532 368899998876533211111 1112
Q ss_pred eEEE--CCEEEEEcCcCCCCCCCCeEEEEECCCCceEe-cCCCc---cC-cCceeEEEE--CCEEEEEeCcccCCCCcee
Q 018336 182 AGEL--NGRVIIAGGHDENKTALSSAWAYDLIKDEWTE-LARMT---QE-RDECEAVVI--GSEFWVVSGYKTERQGIFD 252 (358)
Q Consensus 182 ~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~-~~~~p---~~-~~~~~~~~~--~~~lyv~gG~~~~~~~~~~ 252 (358)
.+.. ++.+++.|+.+. .+.+||..++.-.. +.... .. ......+.+ ++++++.|+.+
T Consensus 212 ~~~~~~~~~~l~~~s~d~------~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d-------- 277 (393)
T 1erj_A 212 VAVSPGDGKYIAAGSLDR------AVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLD-------- 277 (393)
T ss_dssp EEECSTTCCEEEEEETTS------CEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETT--------
T ss_pred EEEECCCCCEEEEEcCCC------cEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCC--------
Confidence 2222 567777776543 48899998775432 21111 11 111122222 56677776643
Q ss_pred eeeEEEECCCC
Q 018336 253 ESAESYQLGTG 263 (358)
Q Consensus 253 ~~i~~yd~~~~ 263 (358)
..+..||..+.
T Consensus 278 ~~v~~wd~~~~ 288 (393)
T 1erj_A 278 RSVKLWNLQNA 288 (393)
T ss_dssp SEEEEEEC---
T ss_pred CEEEEEECCCC
Confidence 35677887654
No 142
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=90.98 E-value=12 Score=36.10 Aligned_cols=101 Identities=9% Similarity=0.076 Sum_probs=58.7
Q ss_pred cceeEEEECCC------C--cEEeCCCCCCCceeeeeEEECCEEEEEcCcCCCCCCCCeEEEEECCCC---ceEecCCCc
Q 018336 154 VSHVFVYDFTT------R--RWTRGKNMPDNRSFFAAGELNGRVIIAGGHDENKTALSSAWAYDLIKD---EWTELARMT 222 (358)
Q Consensus 154 ~~~~~~yd~~t------~--~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~---~W~~~~~~p 222 (358)
.++++++|..+ . .++.+..-..... ......++.+|+.+..+. ....++.+|..+. .|+.+.+..
T Consensus 258 ~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~~~---~~~~l~~~d~~~~~~~~~~~l~~~~ 333 (710)
T 2xdw_A 258 VNRLWYCDLQQESNGITGILKWVKLIDNFEGEY-DYVTNEGTVFTFKTNRHS---PNYRLINIDFTDPEESKWKVLVPEH 333 (710)
T ss_dssp CCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCE-EEEEEETTEEEEEECTTC---TTCEEEEEETTSCCGGGCEEEECCC
T ss_pred ccEEEEEECcccccccCCccceEEeeCCCCcEE-EEEeccCCEEEEEECCCC---CCCEEEEEeCCCCCcccceeccCCC
Confidence 45899999876 4 5666643222222 223345778888865432 2357999999875 488765332
Q ss_pred cCcCceeEEEE-CCEEEEEeCcccCCCCceeeeeEEEECCCCc
Q 018336 223 QERDECEAVVI-GSEFWVVSGYKTERQGIFDESAESYQLGTGE 264 (358)
Q Consensus 223 ~~~~~~~~~~~-~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~ 264 (358)
.......+... ++.+++...... ...++.+|+.+++
T Consensus 334 ~~~~~~~~~~~~~~~lv~~~~~~g------~~~l~~~~~~~g~ 370 (710)
T 2xdw_A 334 EKDVLEWVACVRSNFLVLCYLHDV------KNTLQLHDLATGA 370 (710)
T ss_dssp SSCEEEEEEEETTTEEEEEEEETT------EEEEEEEETTTCC
T ss_pred CCCeEEEEEEEcCCEEEEEEEECC------EEEEEEEECCCCC
Confidence 21111233445 667777664321 4468889986654
No 143
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=90.98 E-value=6.2 Score=32.94 Aligned_cols=146 Identities=12% Similarity=0.032 Sum_probs=70.5
Q ss_pred ceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEECCEEEEE----cCcC------CCCCCCcceeEEEECCCCcEEeCC
Q 018336 102 YGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASSQGKLVVM----GGWD------PASYSPVSHVFVYDFTTRRWTRGK 171 (358)
Q Consensus 102 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~----Gg~~------~~~~~~~~~~~~yd~~t~~W~~~~ 171 (358)
..+..||+.+++...+...............+..-++.+|+. |... .........++++|+. ++...+.
T Consensus 90 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~ 168 (296)
T 3e5z_A 90 RRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPI 168 (296)
T ss_dssp TEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEE
T ss_pred CeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEee
Confidence 368889998888766533211100000111223336788886 3211 0000113479999987 5554432
Q ss_pred -CCCCCceeeeeEE-ECCEEEEEcCcCCCCCCCCeEEEEECC-CCce-Ee--cCCCccCcCceeEE-EECCEEEEEeCcc
Q 018336 172 -NMPDNRSFFAAGE-LNGRVIIAGGHDENKTALSSAWAYDLI-KDEW-TE--LARMTQERDECEAV-VIGSEFWVVSGYK 244 (358)
Q Consensus 172 -~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~-t~~W-~~--~~~~p~~~~~~~~~-~~~~~lyv~gG~~ 244 (358)
.+..+ .+.+. -++++++.... ...+++|++. +++. .. +-...... ...++ --+|+||+..+
T Consensus 169 ~~~~~~---~gi~~s~dg~~lv~~~~------~~~i~~~~~~~~g~~~~~~~~~~~~~~~-p~~i~~d~~G~l~v~~~-- 236 (296)
T 3e5z_A 169 RDRVKP---NGLAFLPSGNLLVSDTG------DNATHRYCLNARGETEYQGVHFTVEPGK-TDGLRVDAGGLIWASAG-- 236 (296)
T ss_dssp CCCSSE---EEEEECTTSCEEEEETT------TTEEEEEEECSSSCEEEEEEEECCSSSC-CCSEEEBTTSCEEEEET--
T ss_pred cCCCCC---ccEEECCCCCEEEEeCC------CCeEEEEEECCCCcCcCCCeEeeCCCCC-CCeEEECCCCCEEEEcC--
Confidence 21111 22222 24655554321 2468899886 5555 21 11111111 11222 33678888761
Q ss_pred cCCCCceeeeeEEEECCCCceEEc
Q 018336 245 TERQGIFDESAESYQLGTGEWKRA 268 (358)
Q Consensus 245 ~~~~~~~~~~i~~yd~~~~~W~~~ 268 (358)
..|.+||+.......+
T Consensus 237 --------~~v~~~~~~g~~~~~~ 252 (296)
T 3e5z_A 237 --------DGVHVLTPDGDELGRV 252 (296)
T ss_dssp --------TEEEEECTTSCEEEEE
T ss_pred --------CeEEEECCCCCEEEEE
Confidence 2578899875544443
No 144
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=90.97 E-value=2.1 Score=38.35 Aligned_cols=106 Identities=11% Similarity=0.028 Sum_probs=55.9
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCC-CCceeeeeEE--ECCEEEEEcCcCCCCCCCCeEEEEECCCC
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMP-DNRSFFAAGE--LNGRVIIAGGHDENKTALSSAWAYDLIKD 213 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~-~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~t~ 213 (358)
++.+++.|+.+ ..+.+||..+..-..+-.+. ....-.+++. .++.+++.|+.+. .+.++|.+++
T Consensus 131 ~~~~lasGs~d-------g~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~------~v~iwd~~~~ 197 (435)
T 4e54_B 131 HPSTVAVGSKG-------GDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEG------TTRLQDFKGN 197 (435)
T ss_dssp CTTCEEEEETT-------SCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSS------CEEEEETTSC
T ss_pred CCCEEEEEeCC-------CEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCC------EEEEeeccCC
Confidence 34566666643 25888888776543322211 1111112222 2455666666543 4889999887
Q ss_pred ceEecCCCccC-cCceeEE-EECCEEEEEeCcccCCCCceeeeeEEEECCCC
Q 018336 214 EWTELARMTQE-RDECEAV-VIGSEFWVVSGYKTERQGIFDESAESYQLGTG 263 (358)
Q Consensus 214 ~W~~~~~~p~~-~~~~~~~-~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~ 263 (358)
..+.+...... .....+. .-++++++.|+.+ ..+..||....
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d--------g~i~~wd~~~~ 241 (435)
T 4e54_B 198 ILRVFASSDTINIWFCSLDVSASSRMVVTGDNV--------GNVILLNMDGK 241 (435)
T ss_dssp EEEEEECCSSCSCCCCCEEEETTTTEEEEECSS--------SBEEEEESSSC
T ss_pred ceeEEeccCCCCccEEEEEECCCCCEEEEEeCC--------CcEeeeccCcc
Confidence 66554322211 1112222 3367777777653 35678887654
No 145
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=90.95 E-value=7.2 Score=33.86 Aligned_cols=104 Identities=8% Similarity=-0.023 Sum_probs=55.8
Q ss_pred EEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCC-CCCceeeeeEEE--CCEEEEEcCcCCCCCCCCeEEEEECCCCce
Q 018336 139 KLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNM-PDNRSFFAAGEL--NGRVIIAGGHDENKTALSSAWAYDLIKDEW 215 (358)
Q Consensus 139 ~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~-~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W 215 (358)
.+++.|+.+ ..+.+||..+.+....... .....-.+++.. ++.+++.|+.+ ..+.+||..+...
T Consensus 87 ~~l~s~~~d-------g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d------~~i~iwd~~~~~~ 153 (383)
T 3ei3_B 87 TTVAVGSKG-------GDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR------GATTLRDFSGSVI 153 (383)
T ss_dssp TEEEEEEBT-------SCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT------TEEEEEETTSCEE
T ss_pred CEEEEEcCC-------CeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC------CEEEEEECCCCce
Confidence 455666542 3688899887776554332 112222223333 34566666543 3589999987766
Q ss_pred EecCCCccCcCce-eEE-EECCEEEEEeCcccCCCCceeeeeEEEECCCC
Q 018336 216 TELARMTQERDEC-EAV-VIGSEFWVVSGYKTERQGIFDESAESYQLGTG 263 (358)
Q Consensus 216 ~~~~~~p~~~~~~-~~~-~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~ 263 (358)
..+.......... .+. .-++++++.|+.+ ..+..||....
T Consensus 154 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------~~i~i~d~~~~ 195 (383)
T 3ei3_B 154 QVFAKTDSWDYWYCCVDVSVSRQMLATGDST--------GRLLLLGLDGH 195 (383)
T ss_dssp EEEECCCCSSCCEEEEEEETTTTEEEEEETT--------SEEEEEETTSC
T ss_pred EEEeccCCCCCCeEEEEECCCCCEEEEECCC--------CCEEEEECCCC
Confidence 6554332211111 222 3356666776542 35778888544
No 146
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=90.90 E-value=7.2 Score=33.83 Aligned_cols=157 Identities=13% Similarity=0.010 Sum_probs=74.7
Q ss_pred ceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEE-CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceee
Q 018336 102 YGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASS-QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFF 180 (358)
Q Consensus 102 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~ 180 (358)
..++.+|..+++-..+...+. ........- ++...++....+. ......++++|..+...+.+..........
T Consensus 168 ~~l~~~d~~~g~~~~l~~~~~-----~~~~~~~sp~dg~~l~~~~~~~~-~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~ 241 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVILQENQ-----WLGHPIYRPYDDSTVAFCHEGPH-DLVDARMWLINEDGTNMRKVKTHAEGESCT 241 (388)
T ss_dssp EEEEEEETTTCCEEEEEEESS-----CEEEEEEETTEEEEEEEEECSCT-TTSSCSEEEEETTSCCCEESCCCCTTEEEE
T ss_pred ceEEEEECCCCceEEeecCCc-----cccccEECCCCCCEEEEEEecCC-CCCcceEEEEeCCCCceEEeeeCCCCcccc
Confidence 578889998887665543222 112222233 3443332221111 012458999999887776665433211111
Q ss_pred eeEE-ECCE-EEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCc-----CceeEEEECCE-EEEEe----CcccCCC
Q 018336 181 AAGE-LNGR-VIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQER-----DECEAVVIGSE-FWVVS----GYKTERQ 248 (358)
Q Consensus 181 ~~~~-~~~~-iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~-----~~~~~~~~~~~-lyv~g----G~~~~~~ 248 (358)
..+. -+++ |++...... .....++++|+.+++-+.+..++... .......-+|+ |++.. |+....
T Consensus 242 ~~~~spdg~~l~~~~~~~~--~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~- 318 (388)
T 3pe7_A 242 HEFWVPDGSALVYVSYLKG--SPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIEN- 318 (388)
T ss_dssp EEEECTTSSCEEEEEEETT--CCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CC-
T ss_pred cceECCCCCEEEEEecCCC--CCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCC-
Confidence 1122 2444 544432211 11135999999998876665443300 00012233443 33221 111111
Q ss_pred CceeeeeEEEECCCCceEEcCC
Q 018336 249 GIFDESAESYQLGTGEWKRAEN 270 (358)
Q Consensus 249 ~~~~~~i~~yd~~~~~W~~~~~ 270 (358)
...++.+|+.+++-..+..
T Consensus 319 ---~~~i~~~d~~~~~~~~l~~ 337 (388)
T 3pe7_A 319 ---DPFLYVFNMKNGTQHRVAR 337 (388)
T ss_dssp ---CCEEEEEETTTTEEEEEEE
T ss_pred ---CCEEEEEeccCCceEEecc
Confidence 3468899999887666553
No 147
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=90.88 E-value=1.8 Score=37.60 Aligned_cols=95 Identities=7% Similarity=0.063 Sum_probs=47.4
Q ss_pred ceeEEEECCCCcEEeCCCC---CCCceeeeeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeE
Q 018336 155 SHVFVYDFTTRRWTRGKNM---PDNRSFFAAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEA 230 (358)
Q Consensus 155 ~~~~~yd~~t~~W~~~~~~---~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~ 230 (358)
..+.+||..+++-...... .....-.+++. -+++.++.|+.+. .+.++|..+++-.. .+.........
T Consensus 103 g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~------~i~iwd~~~~~~~~--~~~~h~~~V~~ 174 (344)
T 4gqb_B 103 GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDI------CIKVWDLAQQVVLS--SYRAHAAQVTC 174 (344)
T ss_dssp SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS------CEEEEETTTTEEEE--EECCCSSCEEE
T ss_pred CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCC------eEEEEECCCCcEEE--EEcCcCCceEE
Confidence 3688899887652211100 00011112222 2566777776543 48999998875322 12111111122
Q ss_pred EEE--CC-EEEEEeCcccCCCCceeeeeEEEECCCCce
Q 018336 231 VVI--GS-EFWVVSGYKTERQGIFDESAESYQLGTGEW 265 (358)
Q Consensus 231 ~~~--~~-~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W 265 (358)
+.+ ++ .+++.|+.+ ..+..||..+++-
T Consensus 175 ~~~~~~~~~~l~s~s~D--------~~v~iwd~~~~~~ 204 (344)
T 4gqb_B 175 VAASPHKDSVFLSCSED--------NRILLWDTRCPKP 204 (344)
T ss_dssp EEECSSCTTEEEEEETT--------SCEEEEETTSSSC
T ss_pred EEecCCCCCceeeeccc--------cccccccccccce
Confidence 222 33 467777653 2467899887653
No 148
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=90.73 E-value=1.7 Score=36.99 Aligned_cols=92 Identities=13% Similarity=0.171 Sum_probs=44.6
Q ss_pred eeEEEECCCCcEEeCCCCCCCceeeeeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEEEC
Q 018336 156 HVFVYDFTTRRWTRGKNMPDNRSFFAAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVVIG 234 (358)
Q Consensus 156 ~~~~yd~~t~~W~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~~ 234 (358)
.+.+||..+.+....-...... -.+++. -++.+++.|+.+ ..+.+||..+..-. ..+........+....
T Consensus 196 ~i~i~d~~~~~~~~~~~~h~~~-v~~~~~s~~~~~l~s~s~D------g~i~iwd~~~~~~~--~~~~~~~~v~~~~~~~ 266 (340)
T 4aow_A 196 LVKVWNLANCKLKTNHIGHTGY-LNTVTVSPDGSLCASGGKD------GQAMLWDLNEGKHL--YTLDGGDIINALCFSP 266 (340)
T ss_dssp CEEEEETTTTEEEEEECCCSSC-EEEEEECTTSSEEEEEETT------CEEEEEETTTTEEE--EEEECSSCEEEEEECS
T ss_pred EEEEEECCCCceeeEecCCCCc-EEEEEECCCCCEEEEEeCC------CeEEEEEeccCcee--eeecCCceEEeeecCC
Confidence 5788888776543321111111 111222 256677777654 35888998775432 2222111112223334
Q ss_pred CEEEEEeCcccCCCCceeeeeEEEECCCCc
Q 018336 235 SEFWVVSGYKTERQGIFDESAESYQLGTGE 264 (358)
Q Consensus 235 ~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~ 264 (358)
+..++.++.+ ..+.+||..+..
T Consensus 267 ~~~~~~~~~d--------~~i~iwd~~~~~ 288 (340)
T 4aow_A 267 NRYWLCAATG--------PSIKIWDLEGKI 288 (340)
T ss_dssp SSSEEEEEET--------TEEEEEETTTTE
T ss_pred CCceeeccCC--------CEEEEEECCCCe
Confidence 4444555432 356778887664
No 149
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=90.69 E-value=8.1 Score=33.79 Aligned_cols=108 Identities=9% Similarity=0.120 Sum_probs=55.5
Q ss_pred CEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCC-----CceeeeeEEE-C-CEEEEEcCcCCCCCCCCeEEEEEC
Q 018336 138 GKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPD-----NRSFFAAGEL-N-GRVIIAGGHDENKTALSSAWAYDL 210 (358)
Q Consensus 138 ~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~-----~~~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~yd~ 210 (358)
+.+++.|+.+ ..+.+||..+.+-...-.... ...-.+++.. + ..+++.|+.+.. ...+.+||.
T Consensus 178 ~~~l~~~~~d-------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~---~~~i~~~d~ 247 (416)
T 2pm9_A 178 AHVFASAGSS-------NFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN---DPSILIWDL 247 (416)
T ss_dssp TTEEEEESSS-------SCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS---SCCCCEEET
T ss_pred CcEEEEEcCC-------CCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC---CceEEEEeC
Confidence 5677777643 368999998876543222221 1111222222 2 346666654431 125888999
Q ss_pred CCCceEecCCCc-cCcCceeEEEE---CCEEEEEeCcccCCCCceeeeeEEEECCCCc
Q 018336 211 IKDEWTELARMT-QERDECEAVVI---GSEFWVVSGYKTERQGIFDESAESYQLGTGE 264 (358)
Q Consensus 211 ~t~~W~~~~~~p-~~~~~~~~~~~---~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~ 264 (358)
.+..- .+..+. ........+.+ ++++++.|+.+ ..+..||..+++
T Consensus 248 ~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d--------g~v~~wd~~~~~ 296 (416)
T 2pm9_A 248 RNANT-PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRD--------NTVLLWNPESAE 296 (416)
T ss_dssp TSTTS-CSBCCCSCCSSCEEEEEECSSCSSCEEEEESS--------SEEEEECSSSCC
T ss_pred CCCCC-CcEEeecCccCceeEEEeCCCCCCeEEEEeCC--------CCEEEeeCCCCc
Confidence 87431 111122 11112222333 56777777652 357889988764
No 150
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=90.69 E-value=6.4 Score=32.59 Aligned_cols=137 Identities=8% Similarity=0.028 Sum_probs=69.7
Q ss_pred ceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEE-ECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceee
Q 018336 102 YGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVAS-SQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFF 180 (358)
Q Consensus 102 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~ 180 (358)
..+..||+....-..+..... .....++. .++.+|+.... ...+.+||+.......+........-.
T Consensus 100 ~~i~~~d~~g~~~~~~~~~~~-----~~~~~i~~~~~g~l~v~~~~-------~~~i~~~~~~g~~~~~~~~~~~~~~p~ 167 (286)
T 1q7f_A 100 HQIQIYNQYGQFVRKFGATIL-----QHPRGVTVDNKGRIIVVECK-------VMRVIIFDQNGNVLHKFGCSKHLEFPN 167 (286)
T ss_dssp CEEEEECTTSCEEEEECTTTC-----SCEEEEEECTTSCEEEEETT-------TTEEEEECTTSCEEEEEECTTTCSSEE
T ss_pred CEEEEECCCCcEEEEecCccC-----CCceEEEEeCCCCEEEEECC-------CCEEEEEcCCCCEEEEeCCCCccCCcE
Confidence 367888855443333322111 11123333 35778887542 247899998665444442111111112
Q ss_pred eeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEEE--CCEEEEEeCcccCCCCceeeeeEE
Q 018336 181 AAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVVI--GSEFWVVSGYKTERQGIFDESAES 257 (358)
Q Consensus 181 ~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~~~i~~ 257 (358)
+.+. -++.+|+.... ...+.+||+.......+.... .......+.+ +|++|+..... ...+.+
T Consensus 168 ~i~~~~~g~l~v~~~~------~~~i~~~~~~g~~~~~~~~~g-~~~~p~~i~~d~~G~l~v~~~~~-------~~~i~~ 233 (286)
T 1q7f_A 168 GVVVNDKQEIFISDNR------AHCVKVFNYEGQYLRQIGGEG-ITNYPIGVGINSNGEILIADNHN-------NFNLTI 233 (286)
T ss_dssp EEEECSSSEEEEEEGG------GTEEEEEETTCCEEEEESCTT-TSCSEEEEEECTTCCEEEEECSS-------SCEEEE
T ss_pred EEEECCCCCEEEEECC------CCEEEEEcCCCCEEEEEccCC-ccCCCcEEEECCCCCEEEEeCCC-------CEEEEE
Confidence 2222 25789987532 246999998665444443211 1112223333 67888887432 126788
Q ss_pred EECCCCc
Q 018336 258 YQLGTGE 264 (358)
Q Consensus 258 yd~~~~~ 264 (358)
||+....
T Consensus 234 ~~~~g~~ 240 (286)
T 1q7f_A 234 FTQDGQL 240 (286)
T ss_dssp ECTTSCE
T ss_pred ECCCCCE
Confidence 9876543
No 151
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=90.62 E-value=7.2 Score=33.08 Aligned_cols=56 Identities=18% Similarity=0.161 Sum_probs=32.6
Q ss_pred ceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEE-C-CEEEEEcCcCCCCCCCcceeEEEECCCCcEE
Q 018336 102 YGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASS-Q-GKLVVMGGWDPASYSPVSHVFVYDFTTRRWT 168 (358)
Q Consensus 102 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~-~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~ 168 (358)
..+.++|+.+++....-..+.... . ..++.. + ..+|+.+.. ...+++||+.+.+..
T Consensus 21 ~~v~~~d~~~~~~~~~~~~~~~~~--~--~~~~~s~dg~~~~v~~~~-------~~~i~~~d~~t~~~~ 78 (349)
T 1jmx_B 21 NNLHVVDVASDTVYKSCVMPDKFG--P--GTAMMAPDNRTAYVLNNH-------YGDIYGIDLDTCKNT 78 (349)
T ss_dssp TEEEEEETTTTEEEEEEECSSCCS--S--CEEEECTTSSEEEEEETT-------TTEEEEEETTTTEEE
T ss_pred CeEEEEECCCCcEEEEEecCCCCC--C--ceeEECCCCCEEEEEeCC-------CCcEEEEeCCCCcEE
Confidence 378899999887544322222000 1 133332 3 457777642 347999999887654
No 152
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=90.59 E-value=10 Score=36.91 Aligned_cols=134 Identities=10% Similarity=-0.014 Sum_probs=65.0
Q ss_pred eEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEE-CCEEEEEcCcCCCCCCCcceeEEEECCCC-cEEe-CCCCCCCcee
Q 018336 103 GVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASS-QGKLVVMGGWDPASYSPVSHVFVYDFTTR-RWTR-GKNMPDNRSF 179 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~-~W~~-~~~~~~~~~~ 179 (358)
.+..||..+++....-..... ... +++.. ++..++.|+. ...+.+||..++ .... +..-.. .-
T Consensus 78 ~i~vw~~~~~~~~~~~~~~~~----~v~-~~~~s~~~~~l~~~~~-------dg~i~vw~~~~~~~~~~~~~~~~~--~v 143 (814)
T 3mkq_A 78 RIRVFNYNTGEKVVDFEAHPD----YIR-SIAVHPTKPYVLSGSD-------DLTVKLWNWENNWALEQTFEGHEH--FV 143 (814)
T ss_dssp EEEEEETTTCCEEEEEECCSS----CEE-EEEECSSSSEEEEEET-------TSEEEEEEGGGTSEEEEEEECCSS--CE
T ss_pred eEEEEECCCCcEEEEEecCCC----CEE-EEEEeCCCCEEEEEcC-------CCEEEEEECCCCceEEEEEcCCCC--cE
Confidence 678899888765432211110 111 22222 4545555553 236889998775 2222 111111 11
Q ss_pred eeeEEE--CCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEEE---CCEEEEEeCcccCCCCceeee
Q 018336 180 FAAGEL--NGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVVI---GSEFWVVSGYKTERQGIFDES 254 (358)
Q Consensus 180 ~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~---~~~lyv~gG~~~~~~~~~~~~ 254 (358)
.+++.. ++..++.|+.+ ..+.+||..+..-..............+... ++.++++|+.+ ..
T Consensus 144 ~~~~~~p~~~~~l~~~~~d------g~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d--------g~ 209 (814)
T 3mkq_A 144 MCVAFNPKDPSTFASGCLD------RTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDD--------LT 209 (814)
T ss_dssp EEEEEETTEEEEEEEEETT------SEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTT--------SE
T ss_pred EEEEEEcCCCCEEEEEeCC------CeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCC--------CE
Confidence 222222 45566666543 3588999866532211111111111122222 67777777653 35
Q ss_pred eEEEECCCCc
Q 018336 255 AESYQLGTGE 264 (358)
Q Consensus 255 i~~yd~~~~~ 264 (358)
+..||..+++
T Consensus 210 i~~~d~~~~~ 219 (814)
T 3mkq_A 210 IKIWDYQTKS 219 (814)
T ss_dssp EEEEETTTTE
T ss_pred EEEEECCCCc
Confidence 7889987764
No 153
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=90.47 E-value=8.9 Score=33.94 Aligned_cols=133 Identities=15% Similarity=0.200 Sum_probs=65.5
Q ss_pred eEEEEeCCCCCeeecCCCCCCCCCCCceeEEEE-ECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeee
Q 018336 103 GVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVAS-SQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFA 181 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~ 181 (358)
.+..||..+++-...-.... . ... +++. .++.+++.|+.+ ..+.+||..+.+-.. .+......-.
T Consensus 131 ~i~vwd~~~~~~~~~l~~h~---~-~V~-~v~~~~~~~~l~sgs~D-------~~i~iwd~~~~~~~~--~~~~h~~~V~ 196 (410)
T 1vyh_C 131 TIKVWDYETGDFERTLKGHT---D-SVQ-DISFDHSGKLLASCSAD-------MTIKLWDFQGFECIR--TMHGHDHNVS 196 (410)
T ss_dssp CEEEEETTTCCCCEEECCCS---S-CEE-EEEECTTSSEEEEEETT-------SCCCEEETTSSCEEE--CCCCCSSCEE
T ss_pred eEEEEECCCCcEEEEEeccC---C-cEE-EEEEcCCCCEEEEEeCC-------CeEEEEeCCCCceeE--EEcCCCCCEE
Confidence 57778877765432211111 0 111 2222 256677777654 357788887654322 2221111111
Q ss_pred eEEE--CCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEE--ECCEEEEEeCcccCCCCceeeeeEE
Q 018336 182 AGEL--NGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVV--IGSEFWVVSGYKTERQGIFDESAES 257 (358)
Q Consensus 182 ~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~--~~~~lyv~gG~~~~~~~~~~~~i~~ 257 (358)
.+.+ ++..++.|+.+ ..+.+||..++.-... +.........+. -++.+++.|+.+ ..+..
T Consensus 197 ~v~~~p~~~~l~s~s~D------~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~g~~l~s~s~D--------~~v~v 260 (410)
T 1vyh_C 197 SVSIMPNGDHIVSASRD------KTIKMWEVQTGYCVKT--FTGHREWVRMVRPNQDGTLIASCSND--------QTVRV 260 (410)
T ss_dssp EEEECSSSSEEEEEETT------SEEEEEETTTCCEEEE--EECCSSCEEEEEECTTSSEEEEEETT--------SCEEE
T ss_pred EEEEeCCCCEEEEEeCC------CeEEEEECCCCcEEEE--EeCCCccEEEEEECCCCCEEEEEcCC--------CeEEE
Confidence 2222 45566666644 3589999987753221 111111112222 256677777653 34678
Q ss_pred EECCCCce
Q 018336 258 YQLGTGEW 265 (358)
Q Consensus 258 yd~~~~~W 265 (358)
||..+++.
T Consensus 261 wd~~~~~~ 268 (410)
T 1vyh_C 261 WVVATKEC 268 (410)
T ss_dssp EETTTCCE
T ss_pred EECCCCce
Confidence 88877654
No 154
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=90.24 E-value=6.5 Score=32.91 Aligned_cols=106 Identities=8% Similarity=0.147 Sum_probs=54.8
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCcee-eeeEEE---CCEEEEEcCcCCCCCCCCeEEEEECCC
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSF-FAAGEL---NGRVIIAGGHDENKTALSSAWAYDLIK 212 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~-~~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~t 212 (358)
++..++.|+.+ ..+.+||..+.+.+.+..+...... .+++.. ++.+++.|+.+ ..+.++|..+
T Consensus 20 ~g~~las~s~D-------~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D------~~v~iWd~~~ 86 (297)
T 2pm7_B 20 YGKRMATCSSD-------KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD------GKVMIWKEEN 86 (297)
T ss_dssp TSSEEEEEETT-------SCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT------TEEEEEEBSS
T ss_pred CCCEEEEEeCC-------CEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCC------CEEEEEEcCC
Confidence 46666666643 3578888765443322222211111 122221 25566666654 3588999988
Q ss_pred CceEecCCCccCcCceeEEEEC----CEEEEEeCcccCCCCceeeeeEEEECCCC
Q 018336 213 DEWTELARMTQERDECEAVVIG----SEFWVVSGYKTERQGIFDESAESYQLGTG 263 (358)
Q Consensus 213 ~~W~~~~~~p~~~~~~~~~~~~----~~lyv~gG~~~~~~~~~~~~i~~yd~~~~ 263 (358)
+.|..+..+.........+.+. +.+++.|+.+ ..+..||..++
T Consensus 87 ~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d--------~~v~~wd~~~~ 133 (297)
T 2pm7_B 87 GRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD--------GKVSVVEFKEN 133 (297)
T ss_dssp SCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT--------SEEEEEEBCSS
T ss_pred CceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECC--------CcEEEEEecCC
Confidence 8776554332222222233332 5566666543 34677887654
No 155
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=90.22 E-value=8.6 Score=33.38 Aligned_cols=67 Identities=12% Similarity=0.063 Sum_probs=35.5
Q ss_pred CCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCC-ccC---cCceeEEEE--CCEEEEEeCcccCCCCceeeeeEEEE
Q 018336 186 NGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARM-TQE---RDECEAVVI--GSEFWVVSGYKTERQGIFDESAESYQ 259 (358)
Q Consensus 186 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~-p~~---~~~~~~~~~--~~~lyv~gG~~~~~~~~~~~~i~~yd 259 (358)
++ +++.|+.+ ..+.+||..+..-...-.. ... ......+.+ ++++++.|+.+.. ...+..||
T Consensus 197 ~~-~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~-----~g~i~i~d 264 (397)
T 1sq9_A 197 RG-LIATGFNN------GTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNS-----FGCITLYE 264 (397)
T ss_dssp TS-EEEEECTT------SEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETT-----EEEEEEEE
T ss_pred Cc-eEEEEeCC------CcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCC-----CceEEEEE
Confidence 45 66666533 4699999987654322111 001 112222232 5667777654311 25788999
Q ss_pred CCCCc
Q 018336 260 LGTGE 264 (358)
Q Consensus 260 ~~~~~ 264 (358)
..+.+
T Consensus 265 ~~~~~ 269 (397)
T 1sq9_A 265 TEFGE 269 (397)
T ss_dssp TTTCC
T ss_pred CCCCc
Confidence 98764
No 156
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=90.16 E-value=9.4 Score=33.70 Aligned_cols=146 Identities=11% Similarity=-0.047 Sum_probs=78.8
Q ss_pred ECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCC--CCCCCceeeeeEEE--CCEEEEEcCcCCCCCCCCeEEEEECC
Q 018336 136 SQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGK--NMPDNRSFFAAGEL--NGRVIIAGGHDENKTALSSAWAYDLI 211 (358)
Q Consensus 136 ~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~--~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~ 211 (358)
.++.||+.-.. ...++++++....-+.+. .+..| .+.++. ++.||+.--. ....++++++.
T Consensus 169 ~~g~lY~~d~~-------~~~I~~~~~dg~~~~~l~~~~l~~P---~giavdp~~g~ly~td~~-----~~~~I~r~~~d 233 (386)
T 3v65_B 169 VHDKLYWTDSG-------TSRIEVANLDGAHRKVLLWQSLEKP---RAIALHPMEGTIYWTDWG-----NTPRIEASSMD 233 (386)
T ss_dssp TTTEEEEEETT-------TTEEEECBTTSCSCEEEECSSCSCE---EEEEEETTTTEEEEEECS-----SSCEEEEEETT
T ss_pred CCCeEEEEcCC-------CCeEEEEeCCCCceEEeecCCCCCC---cEEEEEcCCCeEEEeccC-----CCCEEEEEeCC
Confidence 47899988542 347888888655433332 12222 233333 6889988421 13579999987
Q ss_pred CCceEecCCCccCcCceeEEE--ECCEEEEEeCcccCCCCceeeeeEEEECCCCceEEcCCccccCCCCCceeeeeecCc
Q 018336 212 KDEWTELARMTQERDECEAVV--IGSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRAENAWKLSQCPRSNVGVGREGK 289 (358)
Q Consensus 212 t~~W~~~~~~p~~~~~~~~~~--~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~d~~ 289 (358)
...-+.+.... .....++++ .+++||+.-.. ...|+++|+....-..+.... .
T Consensus 234 G~~~~~~~~~~-~~~PnGlavd~~~~~lY~aD~~--------~~~I~~~d~dG~~~~~~~~~~----~------------ 288 (386)
T 3v65_B 234 GSGRRIIADTH-LFWPNGLTIDYAGRRMYWVDAK--------HHVIERANLDGSHRKAVISQG----L------------ 288 (386)
T ss_dssp SCSCEEEECSS-CSCEEEEEEEGGGTEEEEEETT--------TTEEEEECTTSCSCEEEECSS----C------------
T ss_pred CCCcEEEEECC-CCCeeeEEEeCCCCEEEEEECC--------CCEEEEEeCCCCeeEEEEECC----C------------
Confidence 54333332111 111123333 36889998642 347888988743222221110 0
Q ss_pred cCceeccccceeeceEEEEeCCeEEEECCCCCCCCceEEEEECCCCc
Q 018336 290 LFCWAETEAAVQFGTCRVELGGCTLVTGSGYQGGPQEFYVVEGRNGK 336 (358)
Q Consensus 290 ~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~~~~~~i~~yd~~~~~ 336 (358)
....++++.++.||+..-.. ..|.++|..+++
T Consensus 289 -----------~~P~giav~~~~ly~td~~~----~~V~~~~~~~G~ 320 (386)
T 3v65_B 289 -----------PHPFAITVFEDSLYWTDWHT----KSINSANKFTGK 320 (386)
T ss_dssp -----------SSEEEEEEETTEEEEEETTT----TEEEEEETTTCC
T ss_pred -----------CCceEEEEECCEEEEeeCCC----CeEEEEECCCCc
Confidence 11223455889999985332 578888854443
No 157
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=90.05 E-value=9.3 Score=33.50 Aligned_cols=93 Identities=8% Similarity=0.071 Sum_probs=46.1
Q ss_pred eEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEE-CCEEEEEcCcCCCCCCCcceeEEEECCCCcEE-eCCCCCCCceee
Q 018336 103 GVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASS-QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWT-RGKNMPDNRSFF 180 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~-~~~~~~~~~~~~ 180 (358)
.+..||..+++-......... .. .+++.. ++.+++.|+.+ ..+.+||..+.+-. .+..- ...-.
T Consensus 120 ~i~iwd~~~~~~~~~~~~h~~----~v-~~~~~~~~~~~l~s~s~d-------~~i~iwd~~~~~~~~~~~~h--~~~v~ 185 (420)
T 3vl1_A 120 DIKVLDSNFNLQREIDQAHVS----EI-TKLKFFPSGEALISSSQD-------MQLKIWSVKDGSNPRTLIGH--RATVT 185 (420)
T ss_dssp CEEEECTTSCEEEEETTSSSS----CE-EEEEECTTSSEEEEEETT-------SEEEEEETTTCCCCEEEECC--SSCEE
T ss_pred CEEEEeCCCcceeeecccccC----cc-EEEEECCCCCEEEEEeCC-------CeEEEEeCCCCcCceEEcCC--CCcEE
Confidence 577888876654433211110 11 122222 45566666542 37899998765421 11110 11111
Q ss_pred eeEEE-CCEEEEEcCcCCCCCCCCeEEEEECCCCce
Q 018336 181 AAGEL-NGRVIIAGGHDENKTALSSAWAYDLIKDEW 215 (358)
Q Consensus 181 ~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W 215 (358)
+++.. ++..++.|+.+. .+.+||..+++-
T Consensus 186 ~~~~~~~~~~l~s~~~d~------~v~iwd~~~~~~ 215 (420)
T 3vl1_A 186 DIAIIDRGRNVLSASLDG------TIRLWECGTGTT 215 (420)
T ss_dssp EEEEETTTTEEEEEETTS------CEEEEETTTTEE
T ss_pred EEEEcCCCCEEEEEcCCC------cEEEeECCCCce
Confidence 22222 455666665443 488999887643
No 158
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=90.02 E-value=5.8 Score=34.48 Aligned_cols=104 Identities=12% Similarity=0.120 Sum_probs=52.2
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEEE--CCEEEEEcCcCCCCCCCCeEEEEECCCCc
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGEL--NGRVIIAGGHDENKTALSSAWAYDLIKDE 214 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~ 214 (358)
++.+++.|+.+ ..+.+||..+.+-......+........... ++.+++.|+.+ ..+.+||..+..
T Consensus 111 ~~~~l~s~~~d-------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~v~~~d~~~~~ 177 (408)
T 4a11_B 111 DTGMFTSSSFD-------KTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRG------PKVQLCDLKSGS 177 (408)
T ss_dssp CTTCEEEEETT-------SEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESS------SSEEEEESSSSC
T ss_pred CCcEEEEEeCC-------CeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCC------CeEEEEeCCCcc
Confidence 44566666532 3789999988765443322222221111111 34466666543 358999987654
Q ss_pred eEecCCCccCcCceeEEEE--CCE-EEEEeCcccCCCCceeeeeEEEECCCC
Q 018336 215 WTELARMTQERDECEAVVI--GSE-FWVVSGYKTERQGIFDESAESYQLGTG 263 (358)
Q Consensus 215 W~~~~~~p~~~~~~~~~~~--~~~-lyv~gG~~~~~~~~~~~~i~~yd~~~~ 263 (358)
-.. .+.........+.+ ++. +++.|+.+ ..+..||..+.
T Consensus 178 ~~~--~~~~~~~~v~~~~~~~~~~~ll~~~~~d--------g~i~i~d~~~~ 219 (408)
T 4a11_B 178 CSH--ILQGHRQEILAVSWSPRYDYILATASAD--------SRVKLWDVRRA 219 (408)
T ss_dssp CCE--EECCCCSCEEEEEECSSCTTEEEEEETT--------SCEEEEETTCS
T ss_pred eee--eecCCCCcEEEEEECCCCCcEEEEEcCC--------CcEEEEECCCC
Confidence 221 11111111122222 333 67776543 34678888765
No 159
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=89.96 E-value=15 Score=35.63 Aligned_cols=104 Identities=12% Similarity=0.075 Sum_probs=60.9
Q ss_pred cceeEEEECCCC--c-EEeCCCCCCCceeeeeEEECCEEEEEcCcCCCCCCCCeEEEEECCC--CceEecCCCccCcCce
Q 018336 154 VSHVFVYDFTTR--R-WTRGKNMPDNRSFFAAGELNGRVIIAGGHDENKTALSSAWAYDLIK--DEWTELARMTQERDEC 228 (358)
Q Consensus 154 ~~~~~~yd~~t~--~-W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t--~~W~~~~~~p~~~~~~ 228 (358)
.++++++|..+. . |+.+..-....... ....++.||+....+ .....++.+|..+ ..|+.+-+-.... ..
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~---~~~~~l~~~d~~~~~~~~~~l~~~~~~~-l~ 367 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDG---APLKKIVRVDLSGSTPRFDTVVPESKDN-LE 367 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTT---CTTCEEEEEECSSSSCEEEEEECCCSSE-EE
T ss_pred cceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCC---CCCCEEEEEeCCCCccccEEEecCCCCe-EE
Confidence 468999999877 6 77765433222222 224577888875432 1235799999987 5788765322211 11
Q ss_pred eEEEECCEEEEEeCcccCCCCceeeeeEEEECCCCceEEc
Q 018336 229 EAVVIGSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRA 268 (358)
Q Consensus 229 ~~~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~ 268 (358)
.....++++++...... ...++.+|...+.-..+
T Consensus 368 ~~~~~~~~lv~~~~~dg------~~~l~~~~~~g~~~~~l 401 (741)
T 1yr2_A 368 SVGIAGNRLFASYIHDA------KSQVLAFDLDGKPAGAV 401 (741)
T ss_dssp EEEEEBTEEEEEEEETT------EEEEEEEETTSCEEEEC
T ss_pred EEEEECCEEEEEEEECC------EEEEEEEeCCCCceeec
Confidence 23345778777764431 44678888755433333
No 160
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=89.95 E-value=3.6 Score=34.79 Aligned_cols=106 Identities=11% Similarity=0.023 Sum_probs=51.6
Q ss_pred ceeEEEECCCCcEEeCCCCCCCc-eeeeeEE-ECC-EEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccC----cCc
Q 018336 155 SHVFVYDFTTRRWTRGKNMPDNR-SFFAAGE-LNG-RVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQE----RDE 227 (358)
Q Consensus 155 ~~~~~yd~~t~~W~~~~~~~~~~-~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~----~~~ 227 (358)
..+.++|..+.+-...-.++... ....++. -++ .+|+.+.. ...+.++|+.+++-...-..+.. ...
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~ 84 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNK------SESLVKIDLVTGETLGRIDLSTPEERVKSL 84 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETT------TTEEEEEETTTCCEEEEEECCBTTEEEECT
T ss_pred CeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCC------CCeEEEEECCCCCeEeeEEcCCcccccccc
Confidence 47899999887654322222210 0122222 244 67777542 24699999988765432112110 011
Q ss_pred eeEEE-ECC-EEEEEeCcccCCCCce---eeeeEEEECCCCceE
Q 018336 228 CEAVV-IGS-EFWVVSGYKTERQGIF---DESAESYQLGTGEWK 266 (358)
Q Consensus 228 ~~~~~-~~~-~lyv~gG~~~~~~~~~---~~~i~~yd~~~~~W~ 266 (358)
..++. -++ .+|+...........+ ...+.+||+.+++..
T Consensus 85 ~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~ 128 (337)
T 1pby_B 85 FGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRR 128 (337)
T ss_dssp TCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE
T ss_pred cceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEE
Confidence 12222 245 5666642111000111 357889999887643
No 161
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=89.93 E-value=7.3 Score=33.35 Aligned_cols=26 Identities=12% Similarity=-0.203 Sum_probs=18.7
Q ss_pred EeCCeEEEECCCCCCCCceEEEEECCCCce
Q 018336 308 ELGGCTLVTGSGYQGGPQEFYVVEGRNGKF 337 (358)
Q Consensus 308 ~~~~~i~v~gG~~~~~~~~i~~yd~~~~~W 337 (358)
..++++++.|+.+ ..|.+||..+.+-
T Consensus 179 ~pdg~~lasg~~d----g~i~iwd~~~~~~ 204 (343)
T 3lrv_A 179 HKDSLLLALYSPD----GILDVYNLSSPDQ 204 (343)
T ss_dssp CTTSCEEEEECTT----SCEEEEESSCTTS
T ss_pred CCCCCEEEEEcCC----CEEEEEECCCCCC
Confidence 3467777777765 5788899887654
No 162
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=89.85 E-value=8.6 Score=32.79 Aligned_cols=147 Identities=11% Similarity=-0.062 Sum_probs=80.9
Q ss_pred ECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCC--CCCCCceeeeeEE--ECCEEEEEcCcCCCCCCCCeEEEEECC
Q 018336 136 SQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGK--NMPDNRSFFAAGE--LNGRVIIAGGHDENKTALSSAWAYDLI 211 (358)
Q Consensus 136 ~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~--~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~ 211 (358)
.++.||+.-.. ...+.++|+....-+.+. .+..| .+.++ .++.||+.... ....++++++.
T Consensus 87 ~~~~ly~~d~~-------~~~I~~~~~~g~~~~~~~~~~~~~P---~~iavdp~~g~ly~~d~~-----~~~~I~~~~~d 151 (316)
T 1ijq_A 87 IHSNIYWTDSV-------LGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWG-----TPAKIKKGGLN 151 (316)
T ss_dssp TTTEEEEEETT-------TTEEEEEETTSSSEEEEEECTTCCE---EEEEEETTTTEEEEEECS-----SSCEEEEEETT
T ss_pred cCCeEEEEECC-------CCEEEEEeCCCCceEEEEECCCCCc---ceEEeCCCCCEEEEEccC-----CCCeEEEEcCC
Confidence 47899998542 357899998765444332 22222 23333 36899998521 12579999986
Q ss_pred CCceEecCCCccCcCce-eEEEE--CCEEEEEeCcccCCCCceeeeeEEEECCCCceEEcCCccccCCCCCceeeeeecC
Q 018336 212 KDEWTELARMTQERDEC-EAVVI--GSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRAENAWKLSQCPRSNVGVGREG 288 (358)
Q Consensus 212 t~~W~~~~~~p~~~~~~-~~~~~--~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~d~ 288 (358)
...-+.+... ..... ++++- +++||+.-.. ...|+++|+....-+.+...... .
T Consensus 152 G~~~~~~~~~--~~~~P~gla~d~~~~~lY~~D~~--------~~~I~~~d~dg~~~~~~~~~~~~--~----------- 208 (316)
T 1ijq_A 152 GVDIYSLVTE--NIQWPNGITLDLLSGRLYWVDSK--------LHSISSIDVNGGNRKTILEDEKR--L----------- 208 (316)
T ss_dssp SCCEEEEECS--SCSCEEEEEEETTTTEEEEEETT--------TTEEEEEETTSCSCEEEEECTTT--T-----------
T ss_pred CCCeEEEEEC--CCCCceEEEEeccCCEEEEEECC--------CCeEEEEecCCCceEEEeecCCc--c-----------
Confidence 5433333211 11222 33333 5789998643 34788999875432222211000 0
Q ss_pred ccCceeccccceeeceEEEEeCCeEEEECCCCCCCCceEEEEECCCCc
Q 018336 289 KLFCWAETEAAVQFGTCRVELGGCTLVTGSGYQGGPQEFYVVEGRNGK 336 (358)
Q Consensus 289 ~~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~~~~~~i~~yd~~~~~ 336 (358)
....+++..++.||+.-... ..|.++|+.+++
T Consensus 209 ------------~~P~giav~~~~ly~~d~~~----~~V~~~~~~~g~ 240 (316)
T 1ijq_A 209 ------------AHPFSLAVFEDKVFWTDIIN----EAIFSANRLTGS 240 (316)
T ss_dssp ------------SSEEEEEEETTEEEEEETTT----TEEEEEETTTCC
T ss_pred ------------CCcEEEEEECCEEEEEECCC----CeEEEEeCCCCc
Confidence 11123455688999876432 578888876554
No 163
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=89.83 E-value=7.4 Score=32.00 Aligned_cols=107 Identities=6% Similarity=-0.143 Sum_probs=58.2
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEEE--CCEEEEEcCcCCCCCCCCeEEEEECCCCc
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGEL--NGRVIIAGGHDENKTALSSAWAYDLIKDE 214 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~ 214 (358)
++.||+.... ...++++|+.+..-..+...... .-.+.+.. ++.+|+.-.. ...+.++++....
T Consensus 47 ~~~ly~~d~~-------~~~I~~~~~~g~~~~~~~~~~~~-~p~~ia~d~~~~~lyv~d~~------~~~I~~~~~~g~~ 112 (267)
T 1npe_A 47 DKVVYWTDIS-------EPSIGRASLHGGEPTTIIRQDLG-SPEGIALDHLGRTIFWTDSQ------LDRIEVAKMDGTQ 112 (267)
T ss_dssp TTEEEEEETT-------TTEEEEEESSSCCCEEEECTTCC-CEEEEEEETTTTEEEEEETT------TTEEEEEETTSCS
T ss_pred CCEEEEEECC-------CCEEEEEecCCCCcEEEEECCCC-CccEEEEEecCCeEEEEECC------CCEEEEEEcCCCC
Confidence 5789998642 35799999987643332211111 22334443 5799998432 3578999987543
Q ss_pred eEecCCCccCcCceeEEEE--CCEEEEEeCcccCCCCceeeeeEEEECCCCc
Q 018336 215 WTELARMTQERDECEAVVI--GSEFWVVSGYKTERQGIFDESAESYQLGTGE 264 (358)
Q Consensus 215 W~~~~~~p~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~ 264 (358)
-+.+..... .....+++- +++||+..... . ...|+++++....
T Consensus 113 ~~~~~~~~~-~~P~~i~vd~~~g~lyv~~~~~--~----~~~I~~~~~dg~~ 157 (267)
T 1npe_A 113 RRVLFDTGL-VNPRGIVTDPVRGNLYWTDWNR--D----NPKIETSHMDGTN 157 (267)
T ss_dssp CEEEECSSC-SSEEEEEEETTTTEEEEEECCS--S----SCEEEEEETTSCC
T ss_pred EEEEEECCC-CCccEEEEeeCCCEEEEEECCC--C----CcEEEEEecCCCC
Confidence 333321111 111233333 67899986321 0 2467788876543
No 164
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=89.81 E-value=4.2 Score=34.42 Aligned_cols=108 Identities=6% Similarity=-0.013 Sum_probs=58.7
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEE-ECC-EEEEEcCcCCCCCCCCeEEEEECCCCc
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGE-LNG-RVIIAGGHDENKTALSSAWAYDLIKDE 214 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~~yd~~t~~ 214 (358)
.+.+|+.+.. ...+.+||+.+++....-..+. ....++. -++ .+|+.+..+ ..+++||+.+++
T Consensus 9 ~~~~~v~~~~-------~~~v~~~d~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~~~------~~i~~~d~~~~~ 73 (331)
T 3u4y_A 9 SNFGIVVEQH-------LRRISFFSTDTLEILNQITLGY--DFVDTAITSDCSNVVVTSDFC------QTLVQIETQLEP 73 (331)
T ss_dssp CCEEEEEEGG-------GTEEEEEETTTCCEEEEEECCC--CEEEEEECSSSCEEEEEESTT------CEEEEEECSSSS
T ss_pred CCEEEEEecC-------CCeEEEEeCcccceeeeEEccC--CcceEEEcCCCCEEEEEeCCC------CeEEEEECCCCc
Confidence 5677887653 3489999999988755433322 1223332 244 577775422 379999998877
Q ss_pred e-E-ecCCCccCcCceeEE-EECCE-EEEEeCcccCCCCceeeeeEEEECCCCceEE
Q 018336 215 W-T-ELARMTQERDECEAV-VIGSE-FWVVSGYKTERQGIFDESAESYQLGTGEWKR 267 (358)
Q Consensus 215 W-~-~~~~~p~~~~~~~~~-~~~~~-lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~ 267 (358)
. . .+.....+ ...++ .-+++ +| .+..... ...+.+||+.+++-..
T Consensus 74 ~~~~~~~~~~~~--~~~~~~s~dg~~l~-~~~~~~~-----~~~i~v~d~~~~~~~~ 122 (331)
T 3u4y_A 74 PKVVAIQEGQSS--MADVDITPDDQFAV-TVTGLNH-----PFNMQSYSFLKNKFIS 122 (331)
T ss_dssp CEEEEEEECSSC--CCCEEECTTSSEEE-ECCCSSS-----SCEEEEEETTTTEEEE
T ss_pred eeEEecccCCCC--ccceEECCCCCEEE-EecCCCC-----cccEEEEECCCCCeEE
Confidence 4 2 22211111 11122 23444 55 3322100 2268899998876543
No 165
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=89.72 E-value=9.1 Score=33.88 Aligned_cols=93 Identities=9% Similarity=0.123 Sum_probs=53.5
Q ss_pred ceeEEEECCCCcEEeCCCCCCCceeeeeEE--ECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEE
Q 018336 155 SHVFVYDFTTRRWTRGKNMPDNRSFFAAGE--LNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVV 232 (358)
Q Consensus 155 ~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~ 232 (358)
+.+++||..+++...+-.+......-..+. -++..++.|+.+. .+.+||..+++-... +.........+.
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg------~v~iWd~~~~~~~~~--~~~h~~~v~~~s 196 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA------EVQLWDVQQQKRLRN--MTSHSARVGSLS 196 (420)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS------CEEEEETTTTEEEEE--ECCCSSCEEEEE
T ss_pred CEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCC------eEEEEEcCCCcEEEE--EeCCCCceEEEe
Confidence 379999999987765433332222122222 2567777776543 499999988753322 222222234456
Q ss_pred ECCEEEEEeCcccCCCCceeeeeEEEECCCC
Q 018336 233 IGSEFWVVSGYKTERQGIFDESAESYQLGTG 263 (358)
Q Consensus 233 ~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~ 263 (358)
.++.+.+.|+.. ..+..+|....
T Consensus 197 ~~~~~l~sgs~d--------~~i~~~d~~~~ 219 (420)
T 4gga_A 197 WNSYILSSGSRS--------GHIHHHDVRVA 219 (420)
T ss_dssp EETTEEEEEETT--------SEEEEEETTSS
T ss_pred eCCCEEEEEeCC--------CceeEeeeccc
Confidence 678877777653 24566776654
No 166
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=89.67 E-value=7.2 Score=31.64 Aligned_cols=147 Identities=8% Similarity=0.051 Sum_probs=76.6
Q ss_pred ECCEEEEEcCcCCCCCCCcceeEEEEC---------------CCCcEEeCCCCCCCceeeeeEE--ECCEEEEEcCcCCC
Q 018336 136 SQGKLVVMGGWDPASYSPVSHVFVYDF---------------TTRRWTRGKNMPDNRSFFAAGE--LNGRVIIAGGHDEN 198 (358)
Q Consensus 136 ~~~~lyv~Gg~~~~~~~~~~~~~~yd~---------------~t~~W~~~~~~~~~~~~~~~~~--~~~~iyv~GG~~~~ 198 (358)
.++.+|++-| ..+|+++. .+..|..+|..+.......+++ .++.+|++-|
T Consensus 12 ~~ge~~fFk~---------~~~wr~~~~~~~~~~~~~~~p~~I~~~Wp~LP~~~f~~~~iDAa~~~~~g~~~fFkg---- 78 (225)
T 3oyo_A 12 SEYEVYFFAK---------NKYVRLHYTPGASSDTILTNLRLISSGFPSLAGTPFAEPGIDCSFHTEASEAYVFSG---- 78 (225)
T ss_dssp STTEEEEEET---------TEEEEEECCTTCSCCEEEEEEEEHHHHCGGGTTSTTTTTCCSEEEECSTTEEEEEET----
T ss_pred CCCEEEEEEC---------CEEEEEecccccccCcccCCceehhhhcccCCCccCCCCCEeEEEEcCCCeEEEEcC----
Confidence 4789999976 25777771 1223433433222222333333 5799999965
Q ss_pred CCCCCeEEEEECCC----CceEe----c----CCCccC--cCceeEE-E--ECCEEEEEeCcccCCCCceeeeeEEEECC
Q 018336 199 KTALSSAWAYDLIK----DEWTE----L----ARMTQE--RDECEAV-V--IGSEFWVVSGYKTERQGIFDESAESYQLG 261 (358)
Q Consensus 199 ~~~~~~~~~yd~~t----~~W~~----~----~~~p~~--~~~~~~~-~--~~~~lyv~gG~~~~~~~~~~~~i~~yd~~ 261 (358)
..+++||..+ +.... + +.+|.. ...-.++ . .++++|++-|. ..++||..
T Consensus 79 ----~~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA~~~~~~gk~yfFkG~----------~yw~~d~~ 144 (225)
T 3oyo_A 79 ----NHSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYLFKGN----------KYVRIAYD 144 (225)
T ss_dssp ----TEEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEEEECSSTTEEEEEETT----------EEEEEETT
T ss_pred ----CEEEEEecccccCCCceecCchhhhhcCCCCCCcccccccceEEEECCCCcEEEEeCC----------eEEEEECC
Confidence 3578886532 11111 1 123321 0022233 2 37899999764 35789877
Q ss_pred CCceEEcCCccccCCCCCceeeeeecCccCceecc-----ccceeeceEEEE-eCCeEEEECCCCCCCCceEEEEECCC
Q 018336 262 TGEWKRAENAWKLSQCPRSNVGVGREGKLFCWAET-----EAAVQFGTCRVE-LGGCTLVTGSGYQGGPQEFYVVEGRN 334 (358)
Q Consensus 262 ~~~W~~~~~~p~~~~~~~~~~~~~~d~~~~~W~~l-----p~~~r~~~~~~~-~~~~i~v~gG~~~~~~~~i~~yd~~~ 334 (358)
+++...- +.+.. +.|..+ |. +..+++.. .++++|++-| +..|+||..+
T Consensus 145 ~~~~~~g-Pk~I~----------------~~fpg~~~~~f~~--~iDAAf~~~~~g~~YfFkG------~~ywr~d~~~ 198 (225)
T 3oyo_A 145 SKQLVGN-IRNIG----------------DGFPVLNGTEFES--GIDACFASHKEPEAYLFKG------QNYVRIDFTP 198 (225)
T ss_dssp TTEEEEE-EEEHH----------------HHCGGGTTSTTTT--CCSEEEECSSTTEEEEEET------TEEEEEECCT
T ss_pred CCeecCC-Ccchh----------------hcCCCcccccCCC--CcCEEEEeCCCCEEEEEEC------CEEEEEeCCc
Confidence 7655431 10000 012111 11 12222222 4799999998 4899999983
No 167
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=89.47 E-value=9 Score=32.51 Aligned_cols=138 Identities=9% Similarity=0.126 Sum_probs=67.0
Q ss_pred eEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEE-C---CEEEEEcCcCCCCCCCcceeEEEECCCCc--EEeCCCCCCC
Q 018336 103 GVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASS-Q---GKLVVMGGWDPASYSPVSHVFVYDFTTRR--WTRGKNMPDN 176 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~---~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~ 176 (358)
.+..||..+++........... . -.+++.. + +.+++.|+.+ ..+.+||..+.. -..+.....+
T Consensus 45 ~v~iw~~~~~~~~~~~~~~~~~---~-v~~~~~~~~~~~~~~l~~~~~d-------g~i~iwd~~~~~~~~~~~~~~~~~ 113 (357)
T 3i2n_A 45 VIQLYEIQHGDLKLLREIEKAK---P-IKCGTFGATSLQQRYLATGDFG-------GNLHIWNLEAPEMPVYSVKGHKEI 113 (357)
T ss_dssp EEEEEEECSSSEEEEEEEEESS---C-EEEEECTTCCTTTCCEEEEETT-------SCEEEECTTSCSSCSEEECCCSSC
T ss_pred EEEEEeCCCCcccceeeecccC---c-EEEEEEcCCCCCCceEEEecCC-------CeEEEEeCCCCCccEEEEEecccc
Confidence 6788888887765442221110 1 1122222 2 3666666543 368888887764 1222211111
Q ss_pred ceeeee-----EEECCEEEEEcCcCCCCCCCCeEEEEECCCCc--eEecCCCccC-cCceeEEE------ECCEEEEEeC
Q 018336 177 RSFFAA-----GELNGRVIIAGGHDENKTALSSAWAYDLIKDE--WTELARMTQE-RDECEAVV------IGSEFWVVSG 242 (358)
Q Consensus 177 ~~~~~~-----~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~p~~-~~~~~~~~------~~~~lyv~gG 242 (358)
...... ..-++..++.|+.+ ..+.+||..+.. ...+...... ......+. -++++++.|+
T Consensus 114 v~~~~~~~~~~~s~~~~~l~~~~~d------~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 187 (357)
T 3i2n_A 114 INAIDGIGGLGIGEGAPEIVTGSRD------GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGY 187 (357)
T ss_dssp EEEEEEESGGGCC-CCCEEEEEETT------SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEE
T ss_pred eEEEeeccccccCCCccEEEEEeCC------CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEc
Confidence 111110 01245566666543 358899998764 3333322221 11111222 4677777775
Q ss_pred cccCCCCceeeeeEEEECCCCce
Q 018336 243 YKTERQGIFDESAESYQLGTGEW 265 (358)
Q Consensus 243 ~~~~~~~~~~~~i~~yd~~~~~W 265 (358)
.+ ..+..||..+.+-
T Consensus 188 ~d--------~~i~i~d~~~~~~ 202 (357)
T 3i2n_A 188 DN--------GDIKLFDLRNMAL 202 (357)
T ss_dssp TT--------SEEEEEETTTTEE
T ss_pred cC--------CeEEEEECccCce
Confidence 42 3578899987753
No 168
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=89.34 E-value=5.6 Score=36.11 Aligned_cols=156 Identities=8% Similarity=0.070 Sum_probs=81.4
Q ss_pred eeEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEe--C----CCCCCCceeeeeEE---ECCEEEEEcCcCCCCC
Q 018336 130 FCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTR--G----KNMPDNRSFFAAGE---LNGRVIIAGGHDENKT 200 (358)
Q Consensus 130 ~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~--~----~~~~~~~~~~~~~~---~~~~iyv~GG~~~~~~ 200 (358)
.-+++...+.+|++-|. .+|+++.....+.. + +.+|.. ..++. .++++|++-|
T Consensus 265 fDAi~~~~ge~y~Fkg~---------~~wr~~~~~~~~~p~~I~~~Wp~LP~~---iDAa~~~~~~g~~~fFKg------ 326 (450)
T 1su3_A 265 FDAITTIRGEVMFFKDR---------FYMRTNPFYPEVELNFISVFWPQLPNG---LEAAYEFADRDEVRFFKG------ 326 (450)
T ss_dssp CSEEEEETTEEEEEETT---------EEEECCTTSSSCEEEEGGGTCTTSCSS---CCEEEEEGGGTEEEEEET------
T ss_pred cceEEecCCeEEEEeCC---------EEEEEcCCCCcccceehhHhccCCCCC---eeEEEEEcCCCeEEEEeC------
Confidence 44667789999999772 46666654333211 1 223322 22232 3689999854
Q ss_pred CCCeEEEEECCCC--ce-EecC---CCccCcCce-eEEEE--CCEEEEEeCcccCCCCceeeeeEEEECCCCceEEcCCc
Q 018336 201 ALSSAWAYDLIKD--EW-TELA---RMTQERDEC-EAVVI--GSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRAENA 271 (358)
Q Consensus 201 ~~~~~~~yd~~t~--~W-~~~~---~~p~~~~~~-~~~~~--~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~~~ 271 (358)
..+++|+..+- .+ +.+. .+|...... +++.. ++++|++-|. ..++||..+.+-. ..-
T Consensus 327 --~~~W~~~~~~~~~gyP~~i~~~~g~P~~~~~IDAA~~~~~~~k~yfFkG~----------~yw~yd~~~~~~~--~gY 392 (450)
T 1su3_A 327 --NKYWAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVAN----------KYWRYDEYKRSMD--PGY 392 (450)
T ss_dssp --TEEEEEETTEECTTCSEEHHHHHCCCTTCCCCCEEEEETTTTEEEEEETT----------EEEEEETTTTEEC--SSC
T ss_pred --CEEEEecCCcccCCCceeeehhhcCCCCCCccceEEEEcCCCeEEEEeCC----------EEEEEeCCCcccc--CCC
Confidence 34677764320 00 1111 123211122 23333 6899999763 4578887654311 111
Q ss_pred cccCCCCCceeeeeecCccCceeccccceeeceEEEEeCCeEEEECCCCCCCCceEEEEECCCCceEee
Q 018336 272 WKLSQCPRSNVGVGREGKLFCWAETEAAVQFGTCRVELGGCTLVTGSGYQGGPQEFYVVEGRNGKFRKF 340 (358)
Q Consensus 272 p~~~~~~~~~~~~~~d~~~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~~~~~~i~~yd~~~~~W~~~ 340 (358)
|+.. .+.|..+|.. .. +++..++++|+|-| +..|+||..+++=...
T Consensus 393 ------Pk~I--------~~~fpgip~~--iD-AA~~~~g~~YFFkg------~~ywr~d~~~~~v~~~ 438 (450)
T 1su3_A 393 ------PKMI--------AHDFPGIGHK--VD-AVFMKDGFFYFFHG------TRQYKFDPKTKRILTL 438 (450)
T ss_dssp ------SEEH--------HHHSTTSCSC--CS-EEEEETTEEEEEET------TEEEEEETTTTEEEEE
T ss_pred ------Ccch--------hhcCCCCCCC--cc-EEEEcCCeEEEEeC------CEEEEEECCcceEecc
Confidence 1110 0123333321 22 23346899999988 4799999988765443
No 169
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=89.13 E-value=6.1 Score=35.06 Aligned_cols=95 Identities=15% Similarity=0.156 Sum_probs=51.7
Q ss_pred ceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEE-CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceee
Q 018336 102 YGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASS-QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFF 180 (358)
Q Consensus 102 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~ 180 (358)
..+..+|..+++-..+-.+..... .. .+++.. ++..++.|+.+ ..+.+||..+.+-.... .......
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~~~~~--~V-~sv~fspdg~~lasgs~D-------g~v~iWd~~~~~~~~~~--~~h~~~v 192 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQMEQPGE--YI-SSVAWIKEGNYLAVGTSS-------AEVQLWDVQQQKRLRNM--TSHSARV 192 (420)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTC--CE-EEEEECTTSSEEEEEETT-------SCEEEEETTTTEEEEEE--CCCSSCE
T ss_pred CEEEEEECCCCCEEEEEEecCCCC--cE-EEEEECCCCCEEEEEECC-------CeEEEEEcCCCcEEEEE--eCCCCce
Confidence 468889999988766544333211 11 122222 56677777643 36899999887543221 1111122
Q ss_pred eeEEECCEEEEEcCcCCCCCCCCeEEEEECCCCc
Q 018336 181 AAGELNGRVIIAGGHDENKTALSSAWAYDLIKDE 214 (358)
Q Consensus 181 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~ 214 (358)
.....++.+.+.|+.+ ..+..+|..+..
T Consensus 193 ~~~s~~~~~l~sgs~d------~~i~~~d~~~~~ 220 (420)
T 4gga_A 193 GSLSWNSYILSSGSRS------GHIHHHDVRVAE 220 (420)
T ss_dssp EEEEEETTEEEEEETT------SEEEEEETTSSS
T ss_pred EEEeeCCCEEEEEeCC------CceeEeeecccc
Confidence 2233456666666544 347777776543
No 170
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=89.10 E-value=7.2 Score=30.86 Aligned_cols=149 Identities=11% Similarity=0.153 Sum_probs=79.2
Q ss_pred EEEEECCEEEEEcCcCCCCCCCcceeEEEECCCCc--E-EeC----CCCCCCceeeeeEE--ECCEEEEEcCcCCCCCCC
Q 018336 132 QVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRR--W-TRG----KNMPDNRSFFAAGE--LNGRVIIAGGHDENKTAL 202 (358)
Q Consensus 132 ~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~--W-~~~----~~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~ 202 (358)
+++..++.+|++-| +.+|+++...-. . +.+ +.+|. ...+|. .++++|++-|
T Consensus 10 A~~~~~g~~~fFkg---------~~~w~~~~~~~~~gyP~~I~~~w~glP~---~iDAa~~~~~g~~yfFkg-------- 69 (196)
T 3c7x_A 10 TVAMLRGEMFVFKE---------RWFWRVRNNQVMDGYPMPIGQFWRGLPA---SINTAYERKDGKFVFFKG-------- 69 (196)
T ss_dssp EEEEETTEEEEEET---------TEEEEEETTEECTTCSEEHHHHSTTCCS---SCCEEEECTTSCEEEEET--------
T ss_pred EEEEcCCEEEEEEC---------CEEEEEECCccCCCCceEhhHhccCCCC---CccEEEEeCCCcEEEecC--------
Confidence 56678999999977 368888643100 0 111 23343 222232 4678888854
Q ss_pred CeEEEEECCCCce---EecC----CCccCcCceeEEEE--CCEEEEEeCcccCCCCceeeeeEEEECCCCceEEcCCccc
Q 018336 203 SSAWAYDLIKDEW---TELA----RMTQERDECEAVVI--GSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRAENAWK 273 (358)
Q Consensus 203 ~~~~~yd~~t~~W---~~~~----~~p~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~~~p~ 273 (358)
+..+.|+..+... +.+. .+|.... -++... ++++|++-|. ..++||..+++-. ..-|
T Consensus 70 ~~yw~~~~~~~~~gyPk~I~~~~~glP~~~I-DAA~~~~~~g~~yfFkG~----------~yw~yd~~~~~v~--~gyP- 135 (196)
T 3c7x_A 70 DKHWVFDEASLEPGYPKHIKELGRGLPTDKI-DAALFWMPNGKTYFFRGN----------KYYRFNEELRAVD--SEYP- 135 (196)
T ss_dssp TEEEEEETTEECTTCSEEGGGTCBSCCSSCC-SEEEEETTTTEEEEEETT----------EEEEEETTTTEEC--TTCS-
T ss_pred CEEEEEeCCcccCCCCeEhhhcCCCCCCCcc-cEEEEEccCCEEEEEECC----------EEEEEeCCccccc--CCCC-
Confidence 3578887542110 1222 2332222 123333 6899999764 3478998775321 1111
Q ss_pred cCCCCCceeeeeecCccCceeccccceeeceEEEEeCC-eEEEECCCCCCCCceEEEEECCCCc
Q 018336 274 LSQCPRSNVGVGREGKLFCWAETEAAVQFGTCRVELGG-CTLVTGSGYQGGPQEFYVVEGRNGK 336 (358)
Q Consensus 274 ~~~~~~~~~~~~~d~~~~~W~~lp~~~r~~~~~~~~~~-~i~v~gG~~~~~~~~i~~yd~~~~~ 336 (358)
+. +. .|..+|.. ..++....++ ++|++-| +..|+||..+++
T Consensus 136 -----k~-------i~--~~~gip~~--idaAf~~~~~~~~YfFkg------~~y~r~d~~~~~ 177 (196)
T 3c7x_A 136 -----KN-------IK--VWEGIPES--PRGSFMGSDEVFTYFYKG------NKYWKFNNQKLK 177 (196)
T ss_dssp -----EE-------GG--GSBTCCSS--CSEEEECTTSSEEEEEET------TEEEEEETTTTE
T ss_pred -----cc-------HH--HCCCcCCC--cceeEEecCCCEEEEEEC------CEEEEEECCcce
Confidence 10 01 24444432 2233333344 9999988 489999998764
No 171
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=89.08 E-value=6.1 Score=37.97 Aligned_cols=104 Identities=8% Similarity=0.045 Sum_probs=57.8
Q ss_pred cceeEEEECCCCcEEeCCCCCCCceeeeeEEECCEEEEEcCcCCCCCCCCeEEEEECCCCc---eEecCCCccCcCceeE
Q 018336 154 VSHVFVYDFTTRRWTRGKNMPDNRSFFAAGELNGRVIIAGGHDENKTALSSAWAYDLIKDE---WTELARMTQERDECEA 230 (358)
Q Consensus 154 ~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~---W~~~~~~p~~~~~~~~ 230 (358)
..+++++|..+..++.+..-....... +..++.+|+....+ .....++.+|..+.. |+.+-+..........
T Consensus 251 ~~~l~~~~~~~~~~~~l~~~~~~~~~~--~~~~g~l~~~s~~~---~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~ 325 (695)
T 2bkl_A 251 ENDVYWKRPGEKDFRLLVKGVGAKYEV--HAWKDRFYVLTDEG---APRQRVFEVDPAKPARASWKEIVPEDSSASLLSV 325 (695)
T ss_dssp EEEEEEECTTCSSCEEEEECSSCCEEE--EEETTEEEEEECTT---CTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEE
T ss_pred ceEEEEEcCCCCceEEeecCCCceEEE--EecCCcEEEEECCC---CCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEE
Confidence 457888887777787765322222221 22455566654322 123679999987754 8776532211111223
Q ss_pred EEECCEEEEEeCcccCCCCceeeeeEEEECCCCceEEc
Q 018336 231 VVIGSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRA 268 (358)
Q Consensus 231 ~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~ 268 (358)
...++++++...... ...++.+|+..+.-..+
T Consensus 326 ~~~~~~lv~~~~~dg------~~~l~~~~~~g~~~~~l 357 (695)
T 2bkl_A 326 SIVGGHLSLEYLKDA------TSEVRVATLKGKPVRTV 357 (695)
T ss_dssp EEETTEEEEEEEETT------EEEEEEEETTCCEEEEC
T ss_pred EEECCEEEEEEEECC------EEEEEEEeCCCCeeEEe
Confidence 445888887764431 44678888765433333
No 172
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=88.90 E-value=9.4 Score=35.94 Aligned_cols=117 Identities=19% Similarity=0.197 Sum_probs=67.2
Q ss_pred EEEECCEEEEEcCcCCCCCCCcceeEEEECCCCc--EEeCCCCCCC---c---eeeeeEEECCEEEEEcCcCCCCCCCCe
Q 018336 133 VASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRR--WTRGKNMPDN---R---SFFAAGELNGRVIIAGGHDENKTALSS 204 (358)
Q Consensus 133 ~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~---~---~~~~~~~~~~~iyv~GG~~~~~~~~~~ 204 (358)
.++.++.||+.... ..++.+|..|.+ |+.-...+.. . ...+.++.++.+|+... -..
T Consensus 64 P~v~~g~vyv~~~~--------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~-------dg~ 128 (582)
T 1flg_A 64 AIVSDGVIYVTASY--------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL-------DAS 128 (582)
T ss_dssp CEEETTEEEEEETT--------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET-------TTE
T ss_pred cEEECCEEEEEcCC--------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC-------CCE
Confidence 35679999998752 248999988764 8764332211 1 12344567899988631 246
Q ss_pred EEEEECCCCc--eEecCCCccCc--CceeEEEECC------EEEEEeCcccCCCCceeeeeEEEECCCCc--eEE
Q 018336 205 AWAYDLIKDE--WTELARMTQER--DECEAVVIGS------EFWVVSGYKTERQGIFDESAESYQLGTGE--WKR 267 (358)
Q Consensus 205 ~~~yd~~t~~--W~~~~~~p~~~--~~~~~~~~~~------~lyv~gG~~~~~~~~~~~~i~~yd~~~~~--W~~ 267 (358)
++++|.+|++ |+.-..-+... ...+.++.++ .+|+-...... .....+++||..+++ |+.
T Consensus 129 l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~---~~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 129 VVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEF---GVVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp EEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGG---CCBCEEEEECTTTCCEEEEE
T ss_pred EEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEecccccc---CCCCEEEEEECCCCCEEeec
Confidence 9999998774 87532221111 1122345566 66553211100 124578999998875 864
No 173
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=88.81 E-value=17 Score=34.87 Aligned_cols=147 Identities=12% Similarity=0.046 Sum_probs=79.7
Q ss_pred ceEEEEeCCC------C--CeeecCCCCCCCCCCCceeEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCC---cEEeC
Q 018336 102 YGVTVFDPVS------L--TWDRLGPVPEYPAGLPLFCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTR---RWTRG 170 (358)
Q Consensus 102 ~~~~~~d~~~------~--~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~---~W~~~ 170 (358)
..++.+|..+ . .+..+..... ........-++.||+.+..+. ....++++|..+. .|+.+
T Consensus 259 ~~l~~~d~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~s~dg~~l~~~s~~~~----~~~~l~~~d~~~~~~~~~~~l 329 (710)
T 2xdw_A 259 NRLWYCDLQQESNGITGILKWVKLIDNFE-----GEYDYVTNEGTVFTFKTNRHS----PNYRLINIDFTDPEESKWKVL 329 (710)
T ss_dssp CEEEEEEGGGSSSSSCSSCCCEEEECSSS-----SCEEEEEEETTEEEEEECTTC----TTCEEEEEETTSCCGGGCEEE
T ss_pred cEEEEEECcccccccCCccceEEeeCCCC-----cEEEEEeccCCEEEEEECCCC----CCCEEEEEeCCCCCcccceec
Confidence 4788888865 3 5666644222 112233345778888875432 2357999998875 47776
Q ss_pred CCCCCCceeeeeEEE-CCEEEEEcCcCCCCCCCCeEEEEECCCCc-eEecCCCccCcCceeEEEE--CC-EEEEE-eCcc
Q 018336 171 KNMPDNRSFFAAGEL-NGRVIIAGGHDENKTALSSAWAYDLIKDE-WTELARMTQERDECEAVVI--GS-EFWVV-SGYK 244 (358)
Q Consensus 171 ~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~-W~~~~~~p~~~~~~~~~~~--~~-~lyv~-gG~~ 244 (358)
.+-.....-...+.. ++.+++....+. ...++++|+.+++ .+.+. .+ ......+.. ++ .+++. .+..
T Consensus 330 ~~~~~~~~~~~~~~~~~~~lv~~~~~~g----~~~l~~~~~~~g~~~~~l~-~~--~~~v~~~~~s~d~~~l~~~~ss~~ 402 (710)
T 2xdw_A 330 VPEHEKDVLEWVACVRSNFLVLCYLHDV----KNTLQLHDLATGALLKIFP-LE--VGSVVGYSGQKKDTEIFYQFTSFL 402 (710)
T ss_dssp ECCCSSCEEEEEEEETTTEEEEEEEETT----EEEEEEEETTTCCEEEEEC-CC--SSEEEEEECCTTCSEEEEEEECSS
T ss_pred cCCCCCCeEEEEEEEcCCEEEEEEEECC----EEEEEEEECCCCCEEEecC-CC--CceEEEEecCCCCCEEEEEEeCCC
Confidence 432211122223334 677777654332 3568999986654 34443 22 111122222 34 34333 2222
Q ss_pred cCCCCceeeeeEEEECCCCc--eEEcCC
Q 018336 245 TERQGIFDESAESYQLGTGE--WKRAEN 270 (358)
Q Consensus 245 ~~~~~~~~~~i~~yd~~~~~--W~~~~~ 270 (358)
. ...++.||+.+++ .+.+..
T Consensus 403 --~----P~~i~~~d~~tg~~~~~~l~~ 424 (710)
T 2xdw_A 403 --S----PGIIYHCDLTKEELEPRVFRE 424 (710)
T ss_dssp --C----CCEEEEEETTSSSCCCEEEEE
T ss_pred --C----CCEEEEEECCCCccceEEeee
Confidence 2 4578999999877 665543
No 174
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=88.62 E-value=10 Score=32.13 Aligned_cols=142 Identities=15% Similarity=0.037 Sum_probs=73.0
Q ss_pred ceEEEEeCCCCCeeecCCCCCCCC-----C---------CCceeEEEEE--CCEEEEEcCcCCCCCCCcceeEEEECCCC
Q 018336 102 YGVTVFDPVSLTWDRLGPVPEYPA-----G---------LPLFCQVASS--QGKLVVMGGWDPASYSPVSHVFVYDFTTR 165 (358)
Q Consensus 102 ~~~~~~d~~~~~W~~~~~~~~~~~-----~---------~~~~~~~~~~--~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~ 165 (358)
..+..||+..+.+..+........ + .....+++.. ++.||+.... ..+.++|+.++
T Consensus 40 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~--------~~i~~~d~~~g 111 (322)
T 2fp8_A 40 GRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY--------YHLSVVGSEGG 111 (322)
T ss_dssp SEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT--------TEEEEECTTCE
T ss_pred CeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC--------CCEEEEeCCCC
Confidence 368889998877665432110000 0 0012345444 5789988431 24888998876
Q ss_pred cEEeCCCCCC--Cc-eeeeeEE-E-CCEEEEEcCcCCC-----------CCCCCeEEEEECCCCceEecC-CCccCcCce
Q 018336 166 RWTRGKNMPD--NR-SFFAAGE-L-NGRVIIAGGHDEN-----------KTALSSAWAYDLIKDEWTELA-RMTQERDEC 228 (358)
Q Consensus 166 ~W~~~~~~~~--~~-~~~~~~~-~-~~~iyv~GG~~~~-----------~~~~~~~~~yd~~t~~W~~~~-~~p~~~~~~ 228 (358)
..+.+..... +. ....++. - ++.+|+.-..... ......+++||+.++..+.+. .+. ...
T Consensus 112 ~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~---~p~ 188 (322)
T 2fp8_A 112 HATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELH---VPG 188 (322)
T ss_dssp ECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEES---CCC
T ss_pred EEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCc---cCc
Confidence 5554432111 11 1122233 3 5789987432110 011256999999887765442 111 111
Q ss_pred eEEEE-CC-EEEEEeCcccCCCCceeeeeEEEECCC
Q 018336 229 EAVVI-GS-EFWVVSGYKTERQGIFDESAESYQLGT 262 (358)
Q Consensus 229 ~~~~~-~~-~lyv~gG~~~~~~~~~~~~i~~yd~~~ 262 (358)
.++.- ++ .||+.... ...|.+||+..
T Consensus 189 gia~~~dg~~lyv~d~~--------~~~I~~~~~~~ 216 (322)
T 2fp8_A 189 GAEVSADSSFVLVAEFL--------SHQIVKYWLEG 216 (322)
T ss_dssp EEEECTTSSEEEEEEGG--------GTEEEEEESSS
T ss_pred ceEECCCCCEEEEEeCC--------CCeEEEEECCC
Confidence 23322 34 48887532 34678898875
No 175
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=88.53 E-value=0.56 Score=41.46 Aligned_cols=128 Identities=11% Similarity=0.099 Sum_probs=49.8
Q ss_pred eEEEEeCCCCC--eeecCCCCCCCCCCCceeEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCC--cEEeCCCCCCCce
Q 018336 103 GVTVFDPVSLT--WDRLGPVPEYPAGLPLFCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTR--RWTRGKNMPDNRS 178 (358)
Q Consensus 103 ~~~~~d~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~--~W~~~~~~~~~~~ 178 (358)
.+.++|..+++ |+.-. .+. ....+..++.+|+.+..+ ..++.+|..+. .|+.-...+.. .
T Consensus 20 ~v~a~d~~tG~~~W~~~~---~~~-----~s~p~~~~g~~~v~~s~d-------g~l~a~d~~tG~~~w~~~~~~~~~-~ 83 (369)
T 2hz6_A 20 SLHAVSKRTGSIKWTLKE---DPV-----LQVPTHVEEPAFLPDPND-------GSLYTLGSKNNEGLTKLPFTIPEL-V 83 (369)
T ss_dssp EEEEEETTTCCEEEEEEC---CCS-----CCCC-----CCEEECTTT-------CCEEEC-----CCSEECSCCHHHH-H
T ss_pred EEEEEECCCCCEEEEecC---CCc-----eecceEcCCCEEEEeCCC-------CEEEEEECCCCceeeeeeccCccc-c
Confidence 68899988775 75543 111 112233456677776432 36899998664 46532211100 0
Q ss_pred eeeeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCc--eEecCCCccCcCceeEEEECCEEEEEeCcccCCCCceeeee
Q 018336 179 FFAAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDE--WTELARMTQERDECEAVVIGSEFWVVSGYKTERQGIFDESA 255 (358)
Q Consensus 179 ~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~p~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~~~i 255 (358)
..+.+. .++.+|+ |+. -..++++|..+++ |+.-.... ...+..++.+|+.+ . ...+
T Consensus 84 ~~sp~~~~~~~v~~-g~~------dg~v~a~D~~tG~~~w~~~~~~~-----~~~~p~~~~v~~~~-~--------dg~v 142 (369)
T 2hz6_A 84 QASPCRSSDGILYM-GKK------QDIWYVIDLLTGEKQQTLSSAFA-----DSLSPSTSLLYLGR-T--------EYTI 142 (369)
T ss_dssp TTCSCC-----CCC-CEE------EEEEEEECCC---------------------------EEEEE-E--------EEEE
T ss_pred ccCceEecCCEEEE-EeC------CCEEEEEECCCCcEEEEecCCCc-----ccccccCCEEEEEe-c--------CCEE
Confidence 011111 3444443 321 1358889987654 65322111 01112445555542 2 2467
Q ss_pred EEEECCCCc--eEE
Q 018336 256 ESYQLGTGE--WKR 267 (358)
Q Consensus 256 ~~yd~~~~~--W~~ 267 (358)
.+||+.+++ |+.
T Consensus 143 ~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 143 TMYDTKTRELRWNA 156 (369)
T ss_dssp ECCCSSSSSCCCEE
T ss_pred EEEECCCCCEEEeE
Confidence 889988764 764
No 176
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=88.21 E-value=20 Score=34.81 Aligned_cols=136 Identities=13% Similarity=0.225 Sum_probs=74.1
Q ss_pred eEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCC----CCCCCce
Q 018336 103 GVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGK----NMPDNRS 178 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~----~~~~~~~ 178 (358)
.+..||+.+.++..... ... ..-..+...++.|++... +.+++||+.+++.+... .++....
T Consensus 83 Gl~~yd~~~~~f~~~~~--~~~---~~i~~i~~~~g~lWigt~---------~Gl~~~~~~~~~~~~~~~~~~~l~~~~i 148 (758)
T 3ott_A 83 GILVYNYRADRYEQPET--DFP---TDVRTMALQGDTLWLGAL---------NGLYTYQLQSRKLTSFDTRRNGLPNNTI 148 (758)
T ss_dssp EEEEEETTTTEECCCSC--CCC---SCEEEEEEETTEEEEEET---------TEEEEEETTTCCEEEECHHHHCCSCSCE
T ss_pred CeEEEeCCCCEEECccc--CCC---ceEEEEEecCCcEEEEcC---------CcceeEeCCCCeEEEeccCCCCcCCCeE
Confidence 57899999987754111 111 111223345788887532 26899999998887652 1222111
Q ss_pred eeeeEEE-CCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCcc-CcCc---eeEEEE-CC-EEEEEeCcccCCCCce
Q 018336 179 FFAAGEL-NGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQ-ERDE---CEAVVI-GS-EFWVVSGYKTERQGIF 251 (358)
Q Consensus 179 ~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~-~~~~---~~~~~~-~~-~lyv~gG~~~~~~~~~ 251 (358)
.+.... ++.|++. . . .-+..||+.+++++.+..... .... .++..- ++ .|++-.
T Consensus 149 -~~i~~d~~g~lWig-t-~------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt---------- 209 (758)
T 3ott_A 149 -YSIIRTKDNQIYVG-T-Y------NGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGT---------- 209 (758)
T ss_dssp -EEEEECTTCCEEEE-E-T------TEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEE----------
T ss_pred -EEEEEcCCCCEEEE-e-C------CCHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEE----------
Confidence 122222 5677774 1 1 248899999988876542111 1111 122222 23 466532
Q ss_pred eeeeEEEECCCCceEEcCCc
Q 018336 252 DESAESYQLGTGEWKRAENA 271 (358)
Q Consensus 252 ~~~i~~yd~~~~~W~~~~~~ 271 (358)
...+..||+.++++.....+
T Consensus 210 ~~Gl~~~~~~~~~~~~~~~l 229 (758)
T 3ott_A 210 EGYLFQYFPSTGQIKQTEAF 229 (758)
T ss_dssp EEEEEEEETTTTEEEEEEEE
T ss_pred CCCCeEEcCCCCeEEeccCC
Confidence 12467899999888765433
No 177
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=87.75 E-value=3.1 Score=35.36 Aligned_cols=113 Identities=8% Similarity=0.115 Sum_probs=58.7
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCce-eeeeEEE---CCEEEEEcCcCCCCCCCCeEEEEECCC
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRS-FFAAGEL---NGRVIIAGGHDENKTALSSAWAYDLIK 212 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~-~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~t 212 (358)
++..++.|+.+ ..+.+||..+.....+..+..... -.+++.. ++.+++.|+.+. .+.++|..+
T Consensus 24 ~g~~lasgs~D-------~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~------~v~iWd~~~ 90 (316)
T 3bg1_A 24 YGTRLATCSSD-------RSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDR------KVIIWREEN 90 (316)
T ss_dssp GGCEEEEEETT-------TEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTS------CEEEECCSS
T ss_pred CCCEEEEEeCC-------CeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCC------EEEEEECCC
Confidence 45666666643 368888887765432222211111 1122221 255666666543 488999988
Q ss_pred CceEecCCCccCcCceeEEEE--C--CEEEEEeCcccCCCCceeeeeEEEECCCC-ceEEcCC
Q 018336 213 DEWTELARMTQERDECEAVVI--G--SEFWVVSGYKTERQGIFDESAESYQLGTG-EWKRAEN 270 (358)
Q Consensus 213 ~~W~~~~~~p~~~~~~~~~~~--~--~~lyv~gG~~~~~~~~~~~~i~~yd~~~~-~W~~~~~ 270 (358)
+.|..+..+.........+.+ + +.+++.|+.+ ..+..||..++ .|.....
T Consensus 91 ~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D--------~~i~lwd~~~~~~~~~~~~ 145 (316)
T 3bg1_A 91 GTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSD--------GAISLLTYTGEGQWEVKKI 145 (316)
T ss_dssp SCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSS--------SCEEEEEECSSSCEEECCB
T ss_pred CcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCC--------CCEEEEecCCCCCcceeee
Confidence 877654333222222222332 2 5567777653 24677887765 5754443
No 178
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=87.66 E-value=13 Score=32.19 Aligned_cols=173 Identities=10% Similarity=-0.051 Sum_probs=92.5
Q ss_pred eEEEEeCCCCCeeecCCCCCCCCCCCceeEEEE--ECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCC--CCCCCce
Q 018336 103 GVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVAS--SQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGK--NMPDNRS 178 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~--~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~--~~~~~~~ 178 (358)
.+..+++....-..+....... +. +++. .++.||+.-.. .+.++++++....-+.+. .+..|
T Consensus 96 ~I~r~~~~g~~~~~~~~~~~~~---p~--glavd~~~g~ly~~d~~-------~~~I~~~~~dG~~~~~l~~~~l~~P-- 161 (349)
T 3v64_C 96 RILRANLNGSNVEEVVSTGLES---PG--GLAVDWVHDKLYWTDSG-------TSRIEVANLDGAHRKVLLWQSLEKP-- 161 (349)
T ss_dssp EEEEEETTSCSCEEEECSSCSC---CC--EEEEETTTTEEEEEETT-------TTEEEEEETTSCSCEEEECTTCSCE--
T ss_pred ceEEEecCCCCceEEEeCCCCC---cc--EEEEecCCCeEEEEcCC-------CCeEEEEcCCCCceEEEEeCCCCCc--
Confidence 5677777766544432211110 11 3444 47899998642 357899998765433332 22222
Q ss_pred eeeeEEE--CCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCce-eEEE--ECCEEEEEeCcccCCCCceee
Q 018336 179 FFAAGEL--NGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDEC-EAVV--IGSEFWVVSGYKTERQGIFDE 253 (358)
Q Consensus 179 ~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~-~~~~--~~~~lyv~gG~~~~~~~~~~~ 253 (358)
.+.++. ++.||+.--.. ...++++++....-+.+.. ...... ++++ .+++||+.-.. ..
T Consensus 162 -~~iavdp~~g~ly~td~~~-----~~~I~r~~~dG~~~~~~~~--~~~~~PnGla~d~~~~~lY~aD~~--------~~ 225 (349)
T 3v64_C 162 -RAIALHPMEGTIYWTDWGN-----TPRIEASSMDGSGRRIIAD--THLFWPNGLTIDYAGRRMYWVDAK--------HH 225 (349)
T ss_dssp -EEEEEETTTTEEEEEECSS-----SCEEEEEETTSCSCEESCC--SSCSCEEEEEEETTTTEEEEEETT--------TT
T ss_pred -ceEEEecCcCeEEEeccCC-----CCEEEEEeCCCCCcEEEEE--CCCCCcceEEEeCCCCEEEEEECC--------CC
Confidence 233333 68899984211 3679999987544343321 111222 3333 36789998632 34
Q ss_pred eeEEEECCCCceEEcCCccccCCCCCceeeeeecCccCceeccccceeeceEEEEeCCeEEEECCCCCCCCceEEEEECC
Q 018336 254 SAESYQLGTGEWKRAENAWKLSQCPRSNVGVGREGKLFCWAETEAAVQFGTCRVELGGCTLVTGSGYQGGPQEFYVVEGR 333 (358)
Q Consensus 254 ~i~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~d~~~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~~~~~~i~~yd~~ 333 (358)
.|+++|+....-..+.... . ....+++..++.||+..-.. ..|.++|..
T Consensus 226 ~I~~~~~dG~~~~~~~~~~----~-----------------------~~P~giav~~~~ly~td~~~----~~V~~~~~~ 274 (349)
T 3v64_C 226 VIERANLDGSHRKAVISQG----L-----------------------PHPFAITVFEDSLYWTDWHT----KSINSANKF 274 (349)
T ss_dssp EEEEEETTSCSCEEEECSS----C-----------------------SSEEEEEEETTEEEEEETTT----TEEEEEETT
T ss_pred EEEEEeCCCCceEEEEeCC----C-----------------------CCceEEEEECCEEEEecCCC----CeEEEEEcc
Confidence 7888998753222221110 0 11123455788999985433 577888754
Q ss_pred CCc
Q 018336 334 NGK 336 (358)
Q Consensus 334 ~~~ 336 (358)
+++
T Consensus 275 ~G~ 277 (349)
T 3v64_C 275 TGK 277 (349)
T ss_dssp TCC
T ss_pred CCC
Confidence 443
No 179
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=87.51 E-value=14 Score=32.47 Aligned_cols=132 Identities=5% Similarity=-0.087 Sum_probs=73.7
Q ss_pred eEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEE--CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceee
Q 018336 103 GVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASS--QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFF 180 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~--~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~ 180 (358)
.+..+|+.......+..... ...+++.. ++.||+..-. ...++++++.....+.+....... -.
T Consensus 97 ~I~~i~~~~~~~~~~~~~~~------~~~gl~~d~~~~~ly~~D~~-------~~~I~r~~~~g~~~~~~~~~~~~~-p~ 162 (386)
T 3v65_B 97 DIRQVLPHRSEYTLLLNNLE------NAIALDFHHRRELVFWSDVT-------LDRILRANLNGSNVEEVVSTGLES-PG 162 (386)
T ss_dssp CEEEECTTSCCCEEEECSCS------CEEEEEEETTTTEEEEEETT-------TTEEEEEETTSCCEEEEECSSCSC-CC
T ss_pred cceeeccCCCcEEEEecCCC------ccEEEEEecCCCeEEEEeCC-------CCcEEEEecCCCCcEEEEeCCCCC-cc
Confidence 57778887766655433211 12234433 6889988542 357999999887665542211111 12
Q ss_pred eeEE--ECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecC--CCccCcCceeEEEE--CCEEEEEeCcccCCCCceeee
Q 018336 181 AAGE--LNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELA--RMTQERDECEAVVI--GSEFWVVSGYKTERQGIFDES 254 (358)
Q Consensus 181 ~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~--~~p~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~~~ 254 (358)
+.++ .++.||+.-.. ...++++++....-+.+. .+..+ ..+++- ++.||+..-.. ...
T Consensus 163 glavd~~~g~lY~~d~~------~~~I~~~~~dg~~~~~l~~~~l~~P---~giavdp~~g~ly~td~~~-------~~~ 226 (386)
T 3v65_B 163 GLAVDWVHDKLYWTDSG------TSRIEVANLDGAHRKVLLWQSLEKP---RAIALHPMEGTIYWTDWGN-------TPR 226 (386)
T ss_dssp CEEEETTTTEEEEEETT------TTEEEECBTTSCSCEEEECSSCSCE---EEEEEETTTTEEEEEECSS-------SCE
T ss_pred EEEEEeCCCeEEEEcCC------CCeEEEEeCCCCceEEeecCCCCCC---cEEEEEcCCCeEEEeccCC-------CCE
Confidence 3333 37899998432 346888888654433322 22212 223333 67899885321 247
Q ss_pred eEEEECCCCc
Q 018336 255 AESYQLGTGE 264 (358)
Q Consensus 255 i~~yd~~~~~ 264 (358)
|+++++....
T Consensus 227 I~r~~~dG~~ 236 (386)
T 3v65_B 227 IEASSMDGSG 236 (386)
T ss_dssp EEEEETTSCS
T ss_pred EEEEeCCCCC
Confidence 8899987543
No 180
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=87.35 E-value=4.8 Score=34.44 Aligned_cols=72 Identities=10% Similarity=0.217 Sum_probs=37.0
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCC--CcEEeCCCCCCCceeeeeEEE--CCEEEEEcCcCCCCCCCCeEEEEECCC
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTT--RRWTRGKNMPDNRSFFAAGEL--NGRVIIAGGHDENKTALSSAWAYDLIK 212 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t--~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t 212 (358)
++..++.|+.+ ..+.+||..+ ..++.+..+.........+.. ++.+++.|+.+. .+.++|..+
T Consensus 118 ~g~~las~s~D-------~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~------~i~iW~~~~ 184 (330)
T 2hes_X 118 DGYYLATCSRD-------KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDD------TVRIWKDYD 184 (330)
T ss_dssp TSCEEEEEETT-------SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTS------CEEEEEEET
T ss_pred CCCEEEEEeCC-------CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCC------eEEEEECCC
Confidence 45666666543 3688888743 233332222211111111222 456667766543 488888877
Q ss_pred CceEecCCC
Q 018336 213 DEWTELARM 221 (358)
Q Consensus 213 ~~W~~~~~~ 221 (358)
+.|+.+..+
T Consensus 185 ~~~~~~~~~ 193 (330)
T 2hes_X 185 DDWECVAVL 193 (330)
T ss_dssp TEEEEEEEE
T ss_pred CCeeEEEEc
Confidence 777655433
No 181
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=87.30 E-value=19 Score=33.69 Aligned_cols=104 Identities=14% Similarity=0.178 Sum_probs=55.5
Q ss_pred cceeEEEECCCCcEEeCCCCCCCceeeeeEEE-CC-EEEEEcCcCCCCCCCCeEEEEECCCCceEe---c-CCCccCcCc
Q 018336 154 VSHVFVYDFTTRRWTRGKNMPDNRSFFAAGEL-NG-RVIIAGGHDENKTALSSAWAYDLIKDEWTE---L-ARMTQERDE 227 (358)
Q Consensus 154 ~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~---~-~~~p~~~~~ 227 (358)
...+++.|..+.....+..++..+.-|....- ++ .+|+... ..+.+.++|..+++-.. + ...|.+..+
T Consensus 319 ~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~------~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g 392 (567)
T 1qks_A 319 TGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAAN------ARNKLVVIDTKEGKLVAIEDTGGQTPHPGRG 392 (567)
T ss_dssp TTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEG------GGTEEEEEETTTTEEEEEEECSSSSBCCTTC
T ss_pred CCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeC------CCCeEEEEECCCCcEEEEEeccCcCCCCccc
Confidence 34788899877655444444445555544432 33 4555532 23569999999886432 2 233443233
Q ss_pred eeEEEE--CCEEEEEeCcccCCCCceeeeeEEEECCCCc-----eEEcCCc
Q 018336 228 CEAVVI--GSEFWVVSGYKTERQGIFDESAESYQLGTGE-----WKRAENA 271 (358)
Q Consensus 228 ~~~~~~--~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~-----W~~~~~~ 271 (358)
.. ... .+.+|+.+-.. ...|.++|..+.. |+.+..+
T Consensus 393 ~~-~~~p~~g~v~~t~~~g-------~~~Vsvid~~~~~~~~~~~kvv~~i 435 (567)
T 1qks_A 393 AN-FVHPTFGPVWATSHMG-------DDSVALIGTDPEGHPDNAWKILDSF 435 (567)
T ss_dssp EE-EEETTTEEEEEEEBSS-------SSEEEEEECCTTTCTTTBTSEEEEE
T ss_pred ee-eECCCCCcEEEeCCCC-------CCeEEEecCCCCCCccccCEEEEEE
Confidence 22 223 25577765221 2246667766532 7665543
No 182
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=87.19 E-value=15 Score=32.62 Aligned_cols=109 Identities=9% Similarity=-0.014 Sum_probs=60.5
Q ss_pred ECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEE--ECCEEEEEcCcCCCCCCCCeEEEEECCCC
Q 018336 136 SQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGE--LNGRVIIAGGHDENKTALSSAWAYDLIKD 213 (358)
Q Consensus 136 ~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~t~ 213 (358)
-++.||+.... ...+.++|+.+++-..+.... .. .+ .+. -++.+|+...... ..++.++..++
T Consensus 140 ~~g~lyv~d~~-------~~~I~~id~~~g~~~~~~~~~-~~-~~-ia~~~~g~~l~~~d~~~~-----~~I~~~d~~~~ 204 (409)
T 3hrp_A 140 GNNTVLAYQRD-------DPRVRLISVDDNKVTTVHPGF-KG-GK-PAVTKDKQRVYSIGWEGT-----HTVYVYMKASG 204 (409)
T ss_dssp STTEEEEEETT-------TTEEEEEETTTTEEEEEEETC-CB-CB-CEECTTSSEEEEEBSSTT-----CEEEEEEGGGT
T ss_pred CCCCEEEEecC-------CCcEEEEECCCCEEEEeeccC-CC-Cc-eeEecCCCcEEEEecCCC-----ceEEEEEcCCC
Confidence 36789998752 347999999987766543221 11 12 222 2456777743211 26899998754
Q ss_pred c-eEecCCCc--cCcCceeEEEE--CCEEEEEeCcccCCCCceeeeeEEEECCCCceEEc
Q 018336 214 E-WTELARMT--QERDECEAVVI--GSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRA 268 (358)
Q Consensus 214 ~-W~~~~~~p--~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~ 268 (358)
. ...+.... .......+++. ++.||+... ...+++||+.+.....+
T Consensus 205 ~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~---------~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 205 WAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDS---------NKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp TCEEEEEECCTTSCSCCCBCEECTTSSEEEEECT---------TCEEEEEETTTCCEEEE
T ss_pred ceeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC---------CCcEEEEECCCCCEEEE
Confidence 3 23331111 11111223332 678999432 23688999998875554
No 183
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=87.05 E-value=8 Score=34.67 Aligned_cols=150 Identities=10% Similarity=0.089 Sum_probs=73.3
Q ss_pred CEEEEEcCcCCCCCCCcceeEEEECC--CCcEEe-CCCCCCCceeeeeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCC
Q 018336 138 GKLVVMGGWDPASYSPVSHVFVYDFT--TRRWTR-GKNMPDNRSFFAAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKD 213 (358)
Q Consensus 138 ~~lyv~Gg~~~~~~~~~~~~~~yd~~--t~~W~~-~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~ 213 (358)
..|++.|+.+ ..+.+||.. +..... +.....+..-.+++. -++..+++|+.+ ..++.++..+.
T Consensus 115 ~~l~~~~~~d-------g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~------g~v~~~~~~~~ 181 (450)
T 2vdu_B 115 SRLIACADSD-------KSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKF------GDVYSIDINSI 181 (450)
T ss_dssp SEEEEEEGGG-------TEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT------SEEEEEETTSC
T ss_pred CEEEEEECCC-------CeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCC------CcEEEEecCCc
Confidence 3445777643 368888887 443222 111011111112222 245555665432 45888888765
Q ss_pred ceEe--cCCCccCcCce-eE-EEEC---CEEEEEeCcccCCCCceeeeeEEEECCCCceEEcCCccccCCCCCceeeeee
Q 018336 214 EWTE--LARMTQERDEC-EA-VVIG---SEFWVVSGYKTERQGIFDESAESYQLGTGEWKRAENAWKLSQCPRSNVGVGR 286 (358)
Q Consensus 214 ~W~~--~~~~p~~~~~~-~~-~~~~---~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~ 286 (358)
.-.. ...+....... .+ ..-+ +++++.|+.+ ..|.+||+.+++-...- + ..+..
T Consensus 182 ~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d--------~~i~vwd~~~~~~~~~~-~-----~~h~~----- 242 (450)
T 2vdu_B 182 PEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRD--------EHIKISHYPQCFIVDKW-L-----FGHKH----- 242 (450)
T ss_dssp CCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETT--------SCEEEEEESCTTCEEEE-C-----CCCSS-----
T ss_pred ccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCC--------CcEEEEECCCCceeeee-e-----cCCCC-----
Confidence 4332 11121111111 22 2345 7777777653 35678888766432210 0 00100
Q ss_pred cCccCceeccccceeeceEEEEeCCeEEEECCCCCCCCceEEEEECCCCceE
Q 018336 287 EGKLFCWAETEAAVQFGTCRVELGGCTLVTGSGYQGGPQEFYVVEGRNGKFR 338 (358)
Q Consensus 287 d~~~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~~~~~~i~~yd~~~~~W~ 338 (358)
...+..+. ++++++.|+.+ ..|.+||..+++..
T Consensus 243 --------------~v~~~~~s-d~~~l~s~~~d----~~v~vwd~~~~~~~ 275 (450)
T 2vdu_B 243 --------------FVSSICCG-KDYLLLSAGGD----DKIFAWDWKTGKNL 275 (450)
T ss_dssp --------------CEEEEEEC-STTEEEEEESS----SEEEEEETTTCCEE
T ss_pred --------------ceEEEEEC-CCCEEEEEeCC----CeEEEEECCCCcEe
Confidence 00111233 77888888754 68999999887643
No 184
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=87.05 E-value=14 Score=31.91 Aligned_cols=91 Identities=14% Similarity=0.153 Sum_probs=45.0
Q ss_pred ceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEE----CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEe-CCCCCCC
Q 018336 102 YGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASS----QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTR-GKNMPDN 176 (358)
Q Consensus 102 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~----~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~-~~~~~~~ 176 (358)
..+..||..+.+-......+.. .. .+... ++.+++.|+.+ ..+.+||..+.+-.. +.....+
T Consensus 122 ~~i~iwd~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~-------~~v~~~d~~~~~~~~~~~~~~~~ 188 (408)
T 4a11_B 122 KTLKVWDTNTLQTADVFNFEET-----VY-SHHMSPVSTKHCLVAVGTRG-------PKVQLCDLKSGSCSHILQGHRQE 188 (408)
T ss_dssp SEEEEEETTTTEEEEEEECSSC-----EE-EEEECSSCSSCCEEEEEESS-------SSEEEEESSSSCCCEEECCCCSC
T ss_pred CeEEEeeCCCCccceeccCCCc-----ee-eeEeecCCCCCcEEEEEcCC-------CeEEEEeCCCcceeeeecCCCCc
Confidence 3678888887765444332221 11 22221 33366666532 368999987654321 1111111
Q ss_pred ceeeeeEEE-CC-EEEEEcCcCCCCCCCCeEEEEECCCC
Q 018336 177 RSFFAAGEL-NG-RVIIAGGHDENKTALSSAWAYDLIKD 213 (358)
Q Consensus 177 ~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~yd~~t~ 213 (358)
-.+.+.. ++ .+++.|+.+. .+.+||..+.
T Consensus 189 --v~~~~~~~~~~~ll~~~~~dg------~i~i~d~~~~ 219 (408)
T 4a11_B 189 --ILAVSWSPRYDYILATASADS------RVKLWDVRRA 219 (408)
T ss_dssp --EEEEEECSSCTTEEEEEETTS------CEEEEETTCS
T ss_pred --EEEEEECCCCCcEEEEEcCCC------cEEEEECCCC
Confidence 1122222 33 3677766443 4888988654
No 185
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=86.93 E-value=14 Score=31.80 Aligned_cols=105 Identities=15% Similarity=0.227 Sum_probs=52.9
Q ss_pred CEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCceE
Q 018336 138 GKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDEWT 216 (358)
Q Consensus 138 ~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~ 216 (358)
+.+++.|+.+ ..+.+||..+.+....-...... -.+.+. -++..++.|+.+. .+.+||..++.-.
T Consensus 210 g~~l~sgs~D-------g~v~~wd~~~~~~~~~~~~h~~~-v~~v~~~p~~~~l~s~s~D~------~v~lwd~~~~~~~ 275 (354)
T 2pbi_B 210 GNTFVSGGCD-------KKAMVWDMRSGQCVQAFETHESD-VNSVRYYPSGDAFASGSDDA------TCRLYDLRADREV 275 (354)
T ss_dssp CCEEEEEETT-------SCEEEEETTTCCEEEEECCCSSC-EEEEEECTTSSEEEEEETTS------CEEEEETTTTEEE
T ss_pred CCEEEEEeCC-------CeEEEEECCCCcEEEEecCCCCC-eEEEEEeCCCCEEEEEeCCC------eEEEEECCCCcEE
Confidence 3556666543 36888998877653321111111 111122 2566667766543 4889998876432
Q ss_pred ecCCCccCcCceeEE--EECCEEEEEeCcccCCCCceeeeeEEEECCCCc
Q 018336 217 ELARMTQERDECEAV--VIGSEFWVVSGYKTERQGIFDESAESYQLGTGE 264 (358)
Q Consensus 217 ~~~~~p~~~~~~~~~--~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~ 264 (358)
..-...........+ ..++++.+.|+.+ ..+.+||..+++
T Consensus 276 ~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d--------~~i~vwd~~~~~ 317 (354)
T 2pbi_B 276 AIYSKESIIFGASSVDFSLSGRLLFAGYND--------YTINVWDVLKGS 317 (354)
T ss_dssp EEECCTTCCSCEEEEEECTTSSEEEEEETT--------SCEEEEETTTCS
T ss_pred EEEcCCCcccceeEEEEeCCCCEEEEEECC--------CcEEEEECCCCc
Confidence 211111111122222 2356676666542 357889987654
No 186
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=86.93 E-value=11 Score=32.49 Aligned_cols=74 Identities=8% Similarity=0.166 Sum_probs=39.0
Q ss_pred CC-EEEEEcCcCCCCCCCCeEEEEECCCCceEecCC---CccCcCceeEEEE--CCE-EEEEeCcccCCCCceeeeeEEE
Q 018336 186 NG-RVIIAGGHDENKTALSSAWAYDLIKDEWTELAR---MTQERDECEAVVI--GSE-FWVVSGYKTERQGIFDESAESY 258 (358)
Q Consensus 186 ~~-~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~---~p~~~~~~~~~~~--~~~-lyv~gG~~~~~~~~~~~~i~~y 258 (358)
++ .+|+.+.. ...+.+|+..+++++.+.. .+........+.+ +|+ ||+..... .+.+.+|
T Consensus 221 dg~~l~v~~~~------~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~-------~~~i~v~ 287 (361)
T 3scy_A 221 DGKFAYLINEI------GGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLK-------ADGVAIF 287 (361)
T ss_dssp TSSEEEEEETT------TCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSS-------SCEEEEE
T ss_pred CCCEEEEEcCC------CCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCC-------CCEEEEE
Confidence 44 57776421 2468899988877755442 2222222223333 565 66554220 1245555
Q ss_pred EC--CCCceEEcCCcc
Q 018336 259 QL--GTGEWKRAENAW 272 (358)
Q Consensus 259 d~--~~~~W~~~~~~p 272 (358)
+. .+++++.+...+
T Consensus 288 ~~~~~~g~~~~~~~~~ 303 (361)
T 3scy_A 288 KVDETNGTLTKVGYQL 303 (361)
T ss_dssp EECTTTCCEEEEEEEE
T ss_pred EEcCCCCcEEEeeEec
Confidence 55 577777766553
No 187
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=86.85 E-value=12 Score=30.93 Aligned_cols=94 Identities=9% Similarity=0.023 Sum_probs=44.0
Q ss_pred ECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCc
Q 018336 136 SQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDE 214 (358)
Q Consensus 136 ~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~ 214 (358)
.++..++.|+.+ ..+.+||..+..-........... .+++. -++..++.|+.+. .+.+|+.....
T Consensus 27 ~~~~~l~s~~~d-------g~v~vw~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~dg------~i~~~~~~~~~ 92 (313)
T 3odt_A 27 VDDSKVASVSRD-------GTVRLWSKDDQWLGTVVYTGQGFL-NSVCYDSEKELLLFGGKDT------MINGVPLFATS 92 (313)
T ss_dssp EETTEEEEEETT-------SEEEEEEESSSEEEEEEEECSSCE-EEEEEETTTTEEEEEETTS------CEEEEETTCCT
T ss_pred cCCCEEEEEEcC-------CcEEEEECCCCEEEEEeecCCccE-EEEEECCCCCEEEEecCCC------eEEEEEeeecC
Confidence 455555666532 368899987665433211111111 12222 2566666665443 47777775432
Q ss_pred -eEecCCCccCcCceeEEEECCEEEEEeCc
Q 018336 215 -WTELARMTQERDECEAVVIGSEFWVVSGY 243 (358)
Q Consensus 215 -W~~~~~~p~~~~~~~~~~~~~~lyv~gG~ 243 (358)
.+.+..+.........+..++.+++.|+.
T Consensus 93 ~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~ 122 (313)
T 3odt_A 93 GEDPLYTLIGHQGNVCSLSFQDGVVISGSW 122 (313)
T ss_dssp TSCC-CEECCCSSCEEEEEEETTEEEEEET
T ss_pred CCCcccchhhcccCEEEEEecCCEEEEEeC
Confidence 22222222222222333446666666654
No 188
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=86.79 E-value=6.5 Score=33.05 Aligned_cols=103 Identities=10% Similarity=0.053 Sum_probs=50.1
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEe-CCCCCCCceeeeeEEECCEEEEEcCcCCCCCCCCeEEEEECCCCce
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTR-GKNMPDNRSFFAAGELNGRVIIAGGHDENKTALSSAWAYDLIKDEW 215 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~-~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W 215 (358)
++.+.+.|+.+ ..+.+||..+..-.. +.....+ .......-++..++.|+.+ ..+.+||..++.-
T Consensus 24 ~~~~l~s~~~d-------g~v~lWd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~s~s~d------~~i~vwd~~~~~~ 89 (304)
T 2ynn_A 24 TEPWVLTTLYS-------GRVELWNYETQVEVRSIQVTETP-VRAGKFIARKNWIIVGSDD------FRIRVFNYNTGEK 89 (304)
T ss_dssp SSSEEEEEETT-------SEEEEEETTTTEEEEEEECCSSC-EEEEEEEGGGTEEEEEETT------SEEEEEETTTCCE
T ss_pred CCCEEEEEcCC-------CcEEEEECCCCceeEEeeccCCc-EEEEEEeCCCCEEEEECCC------CEEEEEECCCCcE
Confidence 45555566543 368888887765322 1111111 1111112245566666543 3588999987643
Q ss_pred EecCCCccCcCceeEEE--ECCEEEEEeCcccCCCCceeeeeEEEECCCC
Q 018336 216 TELARMTQERDECEAVV--IGSEFWVVSGYKTERQGIFDESAESYQLGTG 263 (358)
Q Consensus 216 ~~~~~~p~~~~~~~~~~--~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~ 263 (358)
.. .+.........+. -++++++.|+.+ ..+..||..++
T Consensus 90 ~~--~~~~h~~~v~~~~~~~~~~~l~sgs~D--------~~v~lWd~~~~ 129 (304)
T 2ynn_A 90 VV--DFEAHPDYIRSIAVHPTKPYVLSGSDD--------LTVKLWNWENN 129 (304)
T ss_dssp EE--EEECCSSCEEEEEECSSSSEEEEEETT--------SCEEEEEGGGT
T ss_pred EE--EEeCCCCcEEEEEEcCCCCEEEEECCC--------CeEEEEECCCC
Confidence 21 1111111112222 245566666543 24677887654
No 189
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=86.71 E-value=23 Score=33.96 Aligned_cols=147 Identities=11% Similarity=0.061 Sum_probs=81.1
Q ss_pred ceEEEEeCCCC--CeeecCCCCCCCCCCCceeEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCC---cEEeCCCCCCC
Q 018336 102 YGVTVFDPVSL--TWDRLGPVPEYPAGLPLFCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTR---RWTRGKNMPDN 176 (358)
Q Consensus 102 ~~~~~~d~~~~--~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~---~W~~~~~~~~~ 176 (358)
..++.+|..+. .|..+..... .........++.+|+....+. ....++++|..+. .|+.+.+-...
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~~~~-----~~~~~~~~~g~~l~~~t~~~~----~~~~l~~~d~~~~~~~~~~~l~~~~~~ 329 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQGDLD-----ADVSLVDNKGSTLYLLTNRDA----PNRRLVTVDAANPGPAHWRDLIPERQQ 329 (693)
T ss_dssp CEEEEEETTSTTCCCEEEECSSS-----SCEEEEEEETTEEEEEECTTC----TTCEEEEEETTSCCGGGCEEEECCCSS
T ss_pred cEEEEEECCCCCCceEEEeCCCC-----ceEEEEeccCCEEEEEECCCC----CCCEEEEEeCCCCCccccEEEecCCCC
Confidence 47788887665 6766644222 112234455788988876432 2357999998764 37765332222
Q ss_pred ceeeeeEEECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEE--ECC-EEEEE-eCcccCCCCcee
Q 018336 177 RSFFAAGELNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVV--IGS-EFWVV-SGYKTERQGIFD 252 (358)
Q Consensus 177 ~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~--~~~-~lyv~-gG~~~~~~~~~~ 252 (358)
.. .....++.|++..-.+ ....++++|...+..+.+. +|.... ...+. -++ .+++. .+.. . .
T Consensus 330 ~~--~~s~~g~~lv~~~~~~----g~~~l~~~d~~g~~~~~l~-~p~~~~-~~~~~~~~d~~~l~~~~ss~~--t----P 395 (693)
T 3iuj_A 330 VL--TVHSGSGYLFAEYMVD----ATARVEQFDYEGKRVREVA-LPGLGS-VSGFNGKHDDPALYFGFENYA--Q----P 395 (693)
T ss_dssp CE--EEEEETTEEEEEEEET----TEEEEEEECTTSCEEEEEC-CSSSSE-EEECCCCTTCSCEEEEEECSS--S----C
T ss_pred EE--EEEEECCEEEEEEEEC----CeeEEEEEECCCCeeEEee-cCCCce-EEeeecCCCCCEEEEEecCCC--C----C
Confidence 22 4444567776653322 1357899998866555543 332211 11111 133 34433 2221 1 4
Q ss_pred eeeEEEECCCCceEEcCCc
Q 018336 253 ESAESYQLGTGEWKRAENA 271 (358)
Q Consensus 253 ~~i~~yd~~~~~W~~~~~~ 271 (358)
..++.||+.+++.+.+...
T Consensus 396 ~~l~~~d~~~g~~~~l~~~ 414 (693)
T 3iuj_A 396 PTLYRFEPKSGAISLYRAS 414 (693)
T ss_dssp CEEEEECTTTCCEEEEECC
T ss_pred CEEEEEECCCCeEEEEEeC
Confidence 5789999999888777654
No 190
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=86.67 E-value=20 Score=33.19 Aligned_cols=27 Identities=11% Similarity=-0.047 Sum_probs=19.5
Q ss_pred CCeEEEECCCCCCCCceEEEEECCCCceEee
Q 018336 310 GGCTLVTGSGYQGGPQEFYVVEGRNGKFRKF 340 (358)
Q Consensus 310 ~~~i~v~gG~~~~~~~~i~~yd~~~~~W~~~ 340 (358)
+++.++.++.+ ..+.+||..+.+-...
T Consensus 263 ~~~~l~~~~~d----~~i~~wd~~~~~~~~~ 289 (615)
T 1pgu_A 263 DSQKFATVGAD----ATIRVWDVTTSKCVQK 289 (615)
T ss_dssp SSSEEEEEETT----SEEEEEETTTTEEEEE
T ss_pred CCCEEEEEcCC----CcEEEEECCCCcEEEE
Confidence 77777887764 5788999987764433
No 191
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=86.63 E-value=15 Score=31.69 Aligned_cols=92 Identities=11% Similarity=0.224 Sum_probs=47.8
Q ss_pred ceeEEEECCCCcEEe-CCCCCCCceeeeeEE-E--CCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeE
Q 018336 155 SHVFVYDFTTRRWTR-GKNMPDNRSFFAAGE-L--NGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEA 230 (358)
Q Consensus 155 ~~~~~yd~~t~~W~~-~~~~~~~~~~~~~~~-~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~ 230 (358)
..+.+||..+.+-.. +..-.... .+... . ++..++.|+.+. .+.+||..+++....- .........
T Consensus 176 ~~v~lwd~~~~~~~~~~~~h~~~v--~~~~~~~~~~g~~l~sgs~Dg------~v~~wd~~~~~~~~~~--~~h~~~v~~ 245 (354)
T 2pbi_B 176 GTCALWDVESGQLLQSFHGHGADV--LCLDLAPSETGNTFVSGGCDK------KAMVWDMRSGQCVQAF--ETHESDVNS 245 (354)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCE--EEEEECCCSSCCEEEEEETTS------CEEEEETTTCCEEEEE--CCCSSCEEE
T ss_pred CcEEEEeCCCCeEEEEEcCCCCCe--EEEEEEeCCCCCEEEEEeCCC------eEEEEECCCCcEEEEe--cCCCCCeEE
Confidence 368888988765432 11111111 11111 1 346677776543 4899999887653321 111111222
Q ss_pred EEE--CCEEEEEeCcccCCCCceeeeeEEEECCCCc
Q 018336 231 VVI--GSEFWVVSGYKTERQGIFDESAESYQLGTGE 264 (358)
Q Consensus 231 ~~~--~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~ 264 (358)
+.+ ++.+++.|+.+ ..+..||..++.
T Consensus 246 v~~~p~~~~l~s~s~D--------~~v~lwd~~~~~ 273 (354)
T 2pbi_B 246 VRYYPSGDAFASGSDD--------ATCRLYDLRADR 273 (354)
T ss_dssp EEECTTSSEEEEEETT--------SCEEEEETTTTE
T ss_pred EEEeCCCCEEEEEeCC--------CeEEEEECCCCc
Confidence 333 56677777653 246788987764
No 192
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=86.61 E-value=14 Score=31.40 Aligned_cols=146 Identities=12% Similarity=0.215 Sum_probs=67.2
Q ss_pred eEEEEeCCCCCeeecCCCCCC-CCCCCceeEEEE-ECCEEEEEcCcCCCCCCCcceeEEEECCCC-----cEEeCCCCCC
Q 018336 103 GVTVFDPVSLTWDRLGPVPEY-PAGLPLFCQVAS-SQGKLVVMGGWDPASYSPVSHVFVYDFTTR-----RWTRGKNMPD 175 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~~-~~~~~~~~~~~~-~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~-----~W~~~~~~~~ 175 (358)
.+..||...+....+..+... ... ... +++. -++.+++.|+.+ ..+.+||..+. .+..+..+..
T Consensus 35 ~i~lw~~~~~~~~~~~~~~~~~h~~-~v~-~v~~sp~~~~las~s~D-------~~v~iw~~~~~~~~~~~~~~~~~~~~ 105 (330)
T 2hes_X 35 KIKLVSVKYDDFTLIDVLDETAHKK-AIR-SVAWRPHTSLLAAGSFD-------STVSIWAKEESADRTFEMDLLAIIEG 105 (330)
T ss_dssp CEEEEECSSSCCEEEEEECTTCCCS-CEE-EEEECTTSSEEEEEETT-------SCEEEEEC-------CCCEEEEEEC-
T ss_pred EEEEEEecCCCeEEEEEEecCCccC-CEE-EEEECCCCCEEEEEeCC-------CcEEEEEcccCcCccccceeEEEEcC
Confidence 577788877654433222111 110 111 2222 256666777643 35777877432 1221111111
Q ss_pred CceeeeeEEE--CCEEEEEcCcCCCCCCCCeEEEEECCC--CceEecCCCccCcCceeEEEE--CCEEEEEeCcccCCCC
Q 018336 176 NRSFFAAGEL--NGRVIIAGGHDENKTALSSAWAYDLIK--DEWTELARMTQERDECEAVVI--GSEFWVVSGYKTERQG 249 (358)
Q Consensus 176 ~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t--~~W~~~~~~p~~~~~~~~~~~--~~~lyv~gG~~~~~~~ 249 (358)
....-..+.. ++..++.|+.+. .+.+||..+ ..++.+..+.........+.+ ++.+++.|+.+
T Consensus 106 h~~~V~~v~~sp~g~~las~s~D~------~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D----- 174 (330)
T 2hes_X 106 HENEVKGVAWSNDGYYLATCSRDK------SVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYD----- 174 (330)
T ss_dssp ---CEEEEEECTTSCEEEEEETTS------CEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETT-----
T ss_pred CCCcEEEEEECCCCCEEEEEeCCC------EEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCC-----
Confidence 1111111122 566666666543 488888842 334433322222122222222 56677777653
Q ss_pred ceeeeeEEEECCCCceEEcCCc
Q 018336 250 IFDESAESYQLGTGEWKRAENA 271 (358)
Q Consensus 250 ~~~~~i~~yd~~~~~W~~~~~~ 271 (358)
..+..||..++.|..+..+
T Consensus 175 ---~~i~iW~~~~~~~~~~~~~ 193 (330)
T 2hes_X 175 ---DTVRIWKDYDDDWECVAVL 193 (330)
T ss_dssp ---SCEEEEEEETTEEEEEEEE
T ss_pred ---CeEEEEECCCCCeeEEEEc
Confidence 2467788777777665544
No 193
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=86.59 E-value=26 Score=34.40 Aligned_cols=146 Identities=12% Similarity=-0.029 Sum_probs=82.8
Q ss_pred ECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCC--CCCCCceeeeeEE--ECCEEEEEcCcCCCCCCCCeEEEEECC
Q 018336 136 SQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGK--NMPDNRSFFAAGE--LNGRVIIAGGHDENKTALSSAWAYDLI 211 (358)
Q Consensus 136 ~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~--~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~ 211 (358)
.++.||+.-.. ...++++++....-+.+. .+..|+ ++++ .++.||+.-- .....|+++++.
T Consensus 481 ~~~~LY~tD~~-------~~~I~v~~ldG~~~~~l~~~~l~~P~---gIaVDp~~g~LYwtD~-----g~~~~I~~~~~d 545 (791)
T 3m0c_C 481 IHSNIYWTDSV-------LGTVSVADTKGVKRKTLFRENGSKPR---AIVVDPVHGFMYWTDW-----GTPAKIKKGGLN 545 (791)
T ss_dssp TTTEEEEEETT-------TTEEEEEETTSSSEEEEEECTTCCEE---EEEEETTTTEEEEEEC-----SSSCEEEEEETT
T ss_pred cCCcEEEEecC-------CCeEEEEeCCCCeEEEEEeCCCCCcc---eEEEecCCCCEEEecC-----CCCCeEEEEecC
Confidence 47799998642 457999998876655542 222222 3333 3589999841 112568999887
Q ss_pred CCceEecCCCccCcCce-eEEE--ECCEEEEEeCcccCCCCceeeeeEEEECCCCceEEcCCccccCCCCCceeeeeecC
Q 018336 212 KDEWTELARMTQERDEC-EAVV--IGSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRAENAWKLSQCPRSNVGVGREG 288 (358)
Q Consensus 212 t~~W~~~~~~p~~~~~~-~~~~--~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~d~ 288 (358)
...-+.+..- ..... ++++ .+++||+.-.. ...|+++|+....=..+...... .
T Consensus 546 G~~~~~lv~~--~l~~P~GLavD~~~~~LYwaD~~--------~~~I~~~d~dG~~~~~v~~~~~~--l----------- 602 (791)
T 3m0c_C 546 GVDIYSLVTE--NIQWPNGITLDLLSGRLYWVDSK--------LHSISSIDVNGGNRKTILEDEKR--L----------- 602 (791)
T ss_dssp SCCEEEEECS--SCSCEEEEEEETTTTEEEEEETT--------TTEEEEEETTSCSCEEEEECTTT--T-----------
T ss_pred CCceEEEEeC--CCCCceEEEEecCCCeEEEEeCC--------CCcEEEEecCCCceEEEecCCCc--c-----------
Confidence 5443333211 11222 2333 36889999632 34788999875433222211000 0
Q ss_pred ccCceeccccceeeceEEEEeCCeEEEECCCCCCCCceEEEEECCCC
Q 018336 289 KLFCWAETEAAVQFGTCRVELGGCTLVTGSGYQGGPQEFYVVEGRNG 335 (358)
Q Consensus 289 ~~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~~~~~~i~~yd~~~~ 335 (358)
....+++..+++||+.-... ..|+++|..++
T Consensus 603 ------------~~P~glav~~~~lYwtD~~~----~~I~~~dk~tG 633 (791)
T 3m0c_C 603 ------------AHPFSLAVFEDKVFWTDIIN----EAIFSANRLTG 633 (791)
T ss_dssp ------------SSEEEEEEETTEEEEEETTT----TEEEEEETTTC
T ss_pred ------------CCCCEEEEeCCEEEEEECCC----CEEEEEeCCCC
Confidence 11234566889999986543 67888876554
No 194
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=86.37 E-value=13 Score=30.85 Aligned_cols=55 Identities=16% Similarity=0.193 Sum_probs=32.8
Q ss_pred eEEEEeCCCCCeeecCCCCCCCCCCCceeEEEE-ECCEEEEEcCcCCCCCCCcceeEEEECCCCcE
Q 018336 103 GVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVAS-SQGKLVVMGGWDPASYSPVSHVFVYDFTTRRW 167 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W 167 (358)
.+..+|..+++-..+-....... .. .+++. -++..++.|+.+ ..+.+||..+++-
T Consensus 46 tV~iWd~~tg~~~~~~~~~~~~~--~V-~~v~~~~~~~~l~sgs~D-------g~v~iw~~~~~~~ 101 (318)
T 4ggc_A 46 SVYLWSASSGDILQLLQMEQPGE--YI-SSVAWIKEGNYLAVGTSS-------AEVQLWDVQQQKR 101 (318)
T ss_dssp EEEEEETTTCCEEEEEECCSTTC--CE-EEEEECTTSSEEEEEETT-------SEEEEEETTTTEE
T ss_pred EEEEEECCCCCEEEEEEecCCCC--eE-EEEEECCCCCEEEEEECC-------CcEEEeecCCcee
Confidence 68899999987665433322111 11 12222 256677777643 3688999988764
No 195
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=86.07 E-value=21 Score=32.98 Aligned_cols=103 Identities=13% Similarity=0.069 Sum_probs=56.3
Q ss_pred CEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEEE--CCEEEEEcCcCCCCCCCCeEEEEECCCCce
Q 018336 138 GKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGEL--NGRVIIAGGHDENKTALSSAWAYDLIKDEW 215 (358)
Q Consensus 138 ~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W 215 (358)
+..++.|+.. ...+.+||..+.+... ..+...........+ ++.+++.|+.+ ..+.+||..+..-
T Consensus 456 ~~~l~~~~~~------d~~i~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~~d------g~i~iw~~~~~~~ 522 (615)
T 1pgu_A 456 QNYVAVGLEE------GNTIQVFKLSDLEVSF-DLKTPLRAKPSYISISPSETYIAAGDVM------GKILLYDLQSREV 522 (615)
T ss_dssp SSEEEEEETT------TSCEEEEETTEEEEEE-ECSSCCSSCEEEEEECTTSSEEEEEETT------SCEEEEETTTTEE
T ss_pred CCEEEEeecC------CCeEEEEECCCccccc-cccCCccCceEEEEECCCCCEEEEcCCC------CeEEEeeCCCCcc
Confidence 5555555530 1368999998876542 222211111222222 66777777654 3499999987654
Q ss_pred EecCCCcc-CcCceeEEEE------------CCEEEEEeCcccCCCCceeeeeEEEECCCC
Q 018336 216 TELARMTQ-ERDECEAVVI------------GSEFWVVSGYKTERQGIFDESAESYQLGTG 263 (358)
Q Consensus 216 ~~~~~~p~-~~~~~~~~~~------------~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~ 263 (358)
.. .+.. .......+.+ ++++++.|+.+ ..+..||..+.
T Consensus 523 ~~--~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~d--------g~i~iw~~~~~ 573 (615)
T 1pgu_A 523 KT--SRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLD--------TNIFIYSVKRP 573 (615)
T ss_dssp EE--CCSCCCSSCEEEEEECCCC------CCSCCEEEEEETT--------SCEEEEESSCT
T ss_pred ee--EeecCCCCceeEEEEcCccccccccccCCCEEEEEcCC--------CcEEEEECCCC
Confidence 32 2221 1122223333 67777777653 35788999875
No 196
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=86.04 E-value=5 Score=34.19 Aligned_cols=106 Identities=10% Similarity=0.109 Sum_probs=51.8
Q ss_pred EEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEEE-C---CEEEEEcCcCCCCCCCCeEEEEECCCCc
Q 018336 139 KLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGEL-N---GRVIIAGGHDENKTALSSAWAYDLIKDE 214 (358)
Q Consensus 139 ~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~---~~iyv~GG~~~~~~~~~~~~~yd~~t~~ 214 (358)
.+++.|+.+.. -..+.+||..+++............-.+++.. + +.+++.|+.+ ..+.+||..++.
T Consensus 32 ~l~~~~s~~~~----d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~ 101 (357)
T 3i2n_A 32 KFVTMGNFARG----TGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG------GNLHIWNLEAPE 101 (357)
T ss_dssp EEEEEEC--CC----CEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT------SCEEEECTTSCS
T ss_pred eEEEecCccCC----CcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCC------CeEEEEeCCCCC
Confidence 56666653111 24788999888776543221111111122221 2 4666666544 348889988764
Q ss_pred --eEecCCCccCcCceeEE-------EECCEEEEEeCcccCCCCceeeeeEEEECCCCc
Q 018336 215 --WTELARMTQERDECEAV-------VIGSEFWVVSGYKTERQGIFDESAESYQLGTGE 264 (358)
Q Consensus 215 --W~~~~~~p~~~~~~~~~-------~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~ 264 (358)
-..+....... ..+. .-++++++.|+.+ ..+..||+.++.
T Consensus 102 ~~~~~~~~~~~~v--~~~~~~~~~~~s~~~~~l~~~~~d--------~~i~vwd~~~~~ 150 (357)
T 3i2n_A 102 MPVYSVKGHKEII--NAIDGIGGLGIGEGAPEIVTGSRD--------GTVKVWDPRQKD 150 (357)
T ss_dssp SCSEEECCCSSCE--EEEEEESGGGCC-CCCEEEEEETT--------SCEEEECTTSCS
T ss_pred ccEEEEEecccce--EEEeeccccccCCCccEEEEEeCC--------CeEEEEeCCCCC
Confidence 22222111111 1111 1356666666543 356788988764
No 197
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=85.93 E-value=16 Score=31.53 Aligned_cols=61 Identities=13% Similarity=0.208 Sum_probs=33.7
Q ss_pred EEEEEcCcCCCCCCCcceeEEEECCCCc------EEeCCCCCCC---ceeeeeEEE-----CCEE-EEEcCcCCCCCCCC
Q 018336 139 KLVVMGGWDPASYSPVSHVFVYDFTTRR------WTRGKNMPDN---RSFFAAGEL-----NGRV-IIAGGHDENKTALS 203 (358)
Q Consensus 139 ~lyv~Gg~~~~~~~~~~~~~~yd~~t~~------W~~~~~~~~~---~~~~~~~~~-----~~~i-yv~GG~~~~~~~~~ 203 (358)
.+++.|+.+ ..+.+||..+.. +..+...+.. ..-.+++.. ++.. ++.|+.+ .
T Consensus 82 ~~l~s~~~d-------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d------g 148 (397)
T 1sq9_A 82 CLVATTSFS-------GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK------G 148 (397)
T ss_dssp EEEEEEETT-------SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT------S
T ss_pred cEEEEEcCC-------CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC------C
Confidence 677776643 368888888776 6666544311 111222222 4455 6666544 3
Q ss_pred eEEEEECCC
Q 018336 204 SAWAYDLIK 212 (358)
Q Consensus 204 ~~~~yd~~t 212 (358)
.+.+||..+
T Consensus 149 ~i~iwd~~~ 157 (397)
T 1sq9_A 149 TTYIWKFHP 157 (397)
T ss_dssp CEEEEEEES
T ss_pred cEEEEeCCc
Confidence 488888766
No 198
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=85.91 E-value=18 Score=32.08 Aligned_cols=136 Identities=11% Similarity=-0.032 Sum_probs=71.0
Q ss_pred ceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCCc-EEeCCCCC--CCce
Q 018336 102 YGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRR-WTRGKNMP--DNRS 178 (358)
Q Consensus 102 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~-W~~~~~~~--~~~~ 178 (358)
..+..+|+.++.-..+...... +. .+....++.||+..... ...++++|+.+.. ...+...+ ....
T Consensus 152 ~~I~~id~~~g~~~~~~~~~~~----~~-ia~~~~g~~l~~~d~~~------~~~I~~~d~~~~~~~~~~g~~~~~~~~~ 220 (409)
T 3hrp_A 152 PRVRLISVDDNKVTTVHPGFKG----GK-PAVTKDKQRVYSIGWEG------THTVYVYMKASGWAPTRIGQLGSTFSGK 220 (409)
T ss_dssp TEEEEEETTTTEEEEEEETCCB----CB-CEECTTSSEEEEEBSST------TCEEEEEEGGGTTCEEEEEECCTTSCSC
T ss_pred CcEEEEECCCCEEEEeeccCCC----Cc-eeEecCCCcEEEEecCC------CceEEEEEcCCCceeEEeeeccchhcCC
Confidence 3677788877655444322111 11 12222245677775421 1279999987653 22331111 1111
Q ss_pred eeeeEEE--CCEEEEEcCcCCCCCCCCeEEEEECCCCceEecC---CCccCcCc-e-eEEEE--CCEEEEEeCcccCCCC
Q 018336 179 FFAAGEL--NGRVIIAGGHDENKTALSSAWAYDLIKDEWTELA---RMTQERDE-C-EAVVI--GSEFWVVSGYKTERQG 249 (358)
Q Consensus 179 ~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~---~~p~~~~~-~-~~~~~--~~~lyv~gG~~~~~~~ 249 (358)
-++++.. ++.||+... ...++.||+.+.....+. ........ . .+++. ++.||+....
T Consensus 221 p~~iav~p~~g~lyv~d~-------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~------ 287 (409)
T 3hrp_A 221 IGAVALDETEEWLYFVDS-------NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN------ 287 (409)
T ss_dssp CCBCEECTTSSEEEEECT-------TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT------
T ss_pred cEEEEEeCCCCeEEEEEC-------CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC------
Confidence 2233332 688999532 247999999887655442 11111122 1 44444 5789998632
Q ss_pred ceeeeeEEEECCCC
Q 018336 250 IFDESAESYQLGTG 263 (358)
Q Consensus 250 ~~~~~i~~yd~~~~ 263 (358)
...|.+||+...
T Consensus 288 --~~~I~~~~~~g~ 299 (409)
T 3hrp_A 288 --LSSVYKITPDGE 299 (409)
T ss_dssp --TTEEEEECTTCC
T ss_pred --CCEEEEEecCCC
Confidence 346888887754
No 199
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=85.88 E-value=17 Score=31.63 Aligned_cols=181 Identities=10% Similarity=0.082 Sum_probs=87.6
Q ss_pred eEEEEeCCCCCeeecCC--CCCCCCCCCceeEEEE--ECCEEEEEcCcCCCCCCCcceeEEEECCCCc--EEeCCCCCCC
Q 018336 103 GVTVFDPVSLTWDRLGP--VPEYPAGLPLFCQVAS--SQGKLVVMGGWDPASYSPVSHVFVYDFTTRR--WTRGKNMPDN 176 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~--~~~~~~~~~~~~~~~~--~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~ 176 (358)
.+..||..+++-...-. .+..... . -..+.. .++.+++.|+.+ ..+.+||..... -..+..-..+
T Consensus 181 ~i~~wd~~~~~~~~~~~~~~~~~h~~-~-v~~~~~~~~~~~~l~sgs~D-------~~v~~wd~~~~~~~~~~~~~h~~~ 251 (380)
T 3iz6_a 181 TCVLWDVTTGQRISIFGSEFPSGHTA-D-VLSLSINSLNANMFISGSCD-------TTVRLWDLRITSRAVRTYHGHEGD 251 (380)
T ss_dssp CEEEECTTTCCEEEEECCCSSSSCCS-C-EEEEEECSSSCCEEEEEETT-------SCEEEEETTTTCCCCEEECCCSSC
T ss_pred cEEEEEcCCCcEEEEeecccCCCCcc-C-eEEEEeecCCCCEEEEEECC-------CeEEEEECCCCCcceEEECCcCCC
Confidence 47778887776543321 1111110 0 111221 256778887754 368888976321 1111110000
Q ss_pred ceeeeeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCceEec-CCCcc----CcCce-eE-EEECCEEEEEeCcccCCC
Q 018336 177 RSFFAAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDEWTEL-ARMTQ----ERDEC-EA-VVIGSEFWVVSGYKTERQ 248 (358)
Q Consensus 177 ~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~-~~~p~----~~~~~-~~-~~~~~~lyv~gG~~~~~~ 248 (358)
. .+++. -++..++.|+.+. .+.+||..++.-... ...+. ..... .+ ...+|++++.|+.+
T Consensus 252 v--~~v~~~p~~~~l~s~s~D~------~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d---- 319 (380)
T 3iz6_a 252 I--NSVKFFPDGQRFGTGSDDG------TCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN---- 319 (380)
T ss_dssp C--CEEEECTTSSEEEEECSSS------CEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT----
T ss_pred e--EEEEEecCCCeEEEEcCCC------eEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECC----
Confidence 0 11222 2566777776543 488999987653322 11111 11111 22 23467777777542
Q ss_pred CceeeeeEEEECCCCceE-EcCCccccCCCCCceeeeeecCccCceeccccceeeceEEEEeCCeEEEECCCCCCCCceE
Q 018336 249 GIFDESAESYQLGTGEWK-RAENAWKLSQCPRSNVGVGREGKLFCWAETEAAVQFGTCRVELGGCTLVTGSGYQGGPQEF 327 (358)
Q Consensus 249 ~~~~~~i~~yd~~~~~W~-~~~~~p~~~~~~~~~~~~~~d~~~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~~~~~~i 327 (358)
..+.+||..+.+-. .+..+.. .+.. ...+..+..+++.++.|+.+ ..|
T Consensus 320 ----g~i~vwd~~~~~~~~~~~~~~~----~h~~-------------------~v~~l~~s~dg~~l~sgs~D----~~i 368 (380)
T 3iz6_a 320 ----GDCYVWDTLLAEMVLNLGTLQN----SHEG-------------------RISCLGLSSDGSALCTGSWD----KNL 368 (380)
T ss_dssp ----SCEEEEETTTCCEEEEECCSCS----SCCC-------------------CCCEEEECSSSSEEEEECTT----SCE
T ss_pred ----CCEEEEECCCCceEEEEecccC----CCCC-------------------ceEEEEECCCCCEEEEeeCC----CCE
Confidence 35788998776543 2222211 1110 01122344577888888875 567
Q ss_pred EEEECCCC
Q 018336 328 YVVEGRNG 335 (358)
Q Consensus 328 ~~yd~~~~ 335 (358)
.+||....
T Consensus 369 ~iW~~~~~ 376 (380)
T 3iz6_a 369 KIWAFSGH 376 (380)
T ss_dssp EEEECCSS
T ss_pred EEEecCCC
Confidence 77776654
No 200
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=85.65 E-value=11 Score=31.51 Aligned_cols=107 Identities=9% Similarity=0.006 Sum_probs=57.7
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCce
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDEW 215 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W 215 (358)
++.||+.... ...+++||+.++....... +. . -.+.+. -++.+|+.. ...+..||++++++
T Consensus 24 ~~~l~~~d~~-------~~~i~~~d~~~~~~~~~~~-~~-~-~~~i~~~~dG~l~v~~--------~~~l~~~d~~~g~~ 85 (297)
T 3g4e_A 24 SNSLLFVDIP-------AKKVCRWDSFTKQVQRVTM-DA-P-VSSVALRQSGGYVATI--------GTKFCALNWKEQSA 85 (297)
T ss_dssp TTEEEEEETT-------TTEEEEEETTTCCEEEEEC-SS-C-EEEEEEBTTSSEEEEE--------TTEEEEEETTTTEE
T ss_pred CCEEEEEECC-------CCEEEEEECCCCcEEEEeC-CC-c-eEEEEECCCCCEEEEE--------CCeEEEEECCCCcE
Confidence 4678887643 3479999999876644321 11 1 122222 256666652 14699999999988
Q ss_pred EecCCCccC--cCceeEEEE--CCEEEEEeCcccCC---CCceeeeeEEEECC
Q 018336 216 TELARMTQE--RDECEAVVI--GSEFWVVSGYKTER---QGIFDESAESYQLG 261 (358)
Q Consensus 216 ~~~~~~p~~--~~~~~~~~~--~~~lyv~gG~~~~~---~~~~~~~i~~yd~~ 261 (358)
+.+...... ......+.+ +|++|+..-..... .......++.+|+.
T Consensus 86 ~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~ 138 (297)
T 3g4e_A 86 VVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD 138 (297)
T ss_dssp EEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT
T ss_pred EEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC
Confidence 876543221 111222233 67888753211100 00113467888875
No 201
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=85.56 E-value=12 Score=35.90 Aligned_cols=150 Identities=11% Similarity=0.018 Sum_probs=76.5
Q ss_pred ceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCCc---EEeCCCCCCCce
Q 018336 102 YGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRR---WTRGKNMPDNRS 178 (358)
Q Consensus 102 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~---W~~~~~~~~~~~ 178 (358)
..++.+|..+..+..+..... ... ..+..++.+|+....+. ....++++|..+.. |+.+-+......
T Consensus 252 ~~l~~~~~~~~~~~~l~~~~~-----~~~-~~~~~~g~l~~~s~~~~----~~~~l~~~d~~~~~~~~~~~l~~~~~~~~ 321 (695)
T 2bkl_A 252 NDVYWKRPGEKDFRLLVKGVG-----AKY-EVHAWKDRFYVLTDEGA----PRQRVFEVDPAKPARASWKEIVPEDSSAS 321 (695)
T ss_dssp EEEEEECTTCSSCEEEEECSS-----CCE-EEEEETTEEEEEECTTC----TTCEEEEEBTTBCSGGGCEEEECCCSSCE
T ss_pred eEEEEEcCCCCceEEeecCCC-----ceE-EEEecCCcEEEEECCCC----CCCEEEEEeCCCCCccCCeEEecCCCCCe
Confidence 356666766667776654222 111 22234555666654321 23579999987755 776643221111
Q ss_pred eeeeEEECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeE-EEECCEEEEEeCcccCCCCceeeeeEE
Q 018336 179 FFAAGELNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEA-VVIGSEFWVVSGYKTERQGIFDESAES 257 (358)
Q Consensus 179 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~-~~~~~~lyv~gG~~~~~~~~~~~~i~~ 257 (358)
-...+..++.+++....+. ...++.+++....-+.+. ++........ ..-+++.+++...+.. ....++.
T Consensus 322 l~~~~~~~~~lv~~~~~dg----~~~l~~~~~~g~~~~~l~-~~~~~~v~~~~~s~d~~~l~~~~ss~~----~P~~v~~ 392 (695)
T 2bkl_A 322 LLSVSIVGGHLSLEYLKDA----TSEVRVATLKGKPVRTVQ-LPGVGAASNLMGLEDLDDAYYVFTSFT----TPRQIYK 392 (695)
T ss_dssp EEEEEEETTEEEEEEEETT----EEEEEEEETTCCEEEECC-CSSSSEECCCBSCTTCSEEEEEEEETT----EEEEEEE
T ss_pred EEEEEEECCEEEEEEEECC----EEEEEEEeCCCCeeEEec-CCCCeEEEEeecCCCCCEEEEEEcCCC----CCCEEEE
Confidence 1223334888887764332 356888887654444443 2211110011 1114433333222222 2567899
Q ss_pred EECCCCceEEcCC
Q 018336 258 YQLGTGEWKRAEN 270 (358)
Q Consensus 258 yd~~~~~W~~~~~ 270 (358)
||+.+++.+.+..
T Consensus 393 ~d~~~g~~~~l~~ 405 (695)
T 2bkl_A 393 TSVSTGKSELWAK 405 (695)
T ss_dssp EETTTCCEEEEEE
T ss_pred EECCCCcEEEEec
Confidence 9999988766654
No 202
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=85.52 E-value=15 Score=30.57 Aligned_cols=81 Identities=9% Similarity=0.109 Sum_probs=43.5
Q ss_pred ceeEEEECCCCcEEeCCCCCCCcee-eeeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEE
Q 018336 155 SHVFVYDFTTRRWTRGKNMPDNRSF-FAAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVV 232 (358)
Q Consensus 155 ~~~~~yd~~t~~W~~~~~~~~~~~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~ 232 (358)
+.+.+||..+++....-.+...... .+++. -+++.++.|+.+ ..+.++|.++++-.... ...........
T Consensus 45 ~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~D------g~v~iw~~~~~~~~~~~--~~h~~~~~~~~ 116 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS------AEVQLWDVQQQKRLRNM--TSHSARVGSLS 116 (318)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT------SEEEEEETTTTEEEEEE--ECCSSCEEEEE
T ss_pred CEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECC------CcEEEeecCCceeEEEe--cCccceEEEee
Confidence 3689999998876554322222111 22222 256677777654 35889999887543221 11112223345
Q ss_pred ECCEEEEEeCc
Q 018336 233 IGSEFWVVSGY 243 (358)
Q Consensus 233 ~~~~lyv~gG~ 243 (358)
.++.+.+.|+.
T Consensus 117 ~~~~~l~s~~~ 127 (318)
T 4ggc_A 117 WNSYILSSGSR 127 (318)
T ss_dssp EETTEEEEEET
T ss_pred cCCCEEEEEec
Confidence 55666666654
No 203
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=85.48 E-value=13 Score=29.94 Aligned_cols=152 Identities=14% Similarity=0.213 Sum_probs=80.0
Q ss_pred eeEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCCc-E--EeC----CCCCCCceeeeeEE---ECCEEEEEcCcCCCC
Q 018336 130 FCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRR-W--TRG----KNMPDNRSFFAAGE---LNGRVIIAGGHDENK 199 (358)
Q Consensus 130 ~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~-W--~~~----~~~~~~~~~~~~~~---~~~~iyv~GG~~~~~ 199 (358)
..+++...+.+|++-| +.+|+++..... . ..+ +.+|. ...+|. .++++|++-|
T Consensus 33 ~DAi~~~~g~~~fFkg---------~~~Wr~~~~~~~~~~P~~I~~~wp~lp~---~IDAA~~~~~~~k~yfFkG----- 95 (218)
T 1gen_A 33 FDGIAQIRGEIFFFKD---------RFIWRTVTPRDKPMGPLLVATFWPELPE---KIDAVYEAPQEEKAVFFAG----- 95 (218)
T ss_dssp CSEEEEETTEEEEEET---------TEEEEESSTTSCCEEEEEGGGTCTTSCS---CCSEEEEETTTTEEEEEET-----
T ss_pred EeEEEeCCCcEEEEEC---------CEEEEEeCCCCccCCCEEHHHhcCCCCC---CccEEEEECCCCEEEEEeC-----
Confidence 4466677999999977 256776654321 1 112 22332 222332 2688999955
Q ss_pred CCCCeEEEEECCCCc---eEecC--CCccCcCceeEE-E--ECCEEEEEeCcccCCCCceeeeeEEEECCCCceEEcCCc
Q 018336 200 TALSSAWAYDLIKDE---WTELA--RMTQERDECEAV-V--IGSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRAENA 271 (358)
Q Consensus 200 ~~~~~~~~yd~~t~~---W~~~~--~~p~~~~~~~~~-~--~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~~~ 271 (358)
+..++|+..+-. =+.+. .+|.......++ . .++++|++-|. ..++||..+++-. ..-
T Consensus 96 ---~~yW~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG~----------~ywr~d~~~~~v~--~gy 160 (218)
T 1gen_A 96 ---NEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAGD----------KFWRYNEVKKKMD--PGF 160 (218)
T ss_dssp ---TEEEEEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEETT----------EEEEEETTTTEEC--SSC
T ss_pred ---CEEEEEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEECC----------EEEEEECcccccc--CCC
Confidence 458888853100 01121 122221122233 3 36899999764 3578998776321 111
Q ss_pred cccCCCCCceeeeeecCccCceeccccceeeceEEEEe--CCeEEEECCCCCCCCceEEEEECCCCc
Q 018336 272 WKLSQCPRSNVGVGREGKLFCWAETEAAVQFGTCRVEL--GGCTLVTGSGYQGGPQEFYVVEGRNGK 336 (358)
Q Consensus 272 p~~~~~~~~~~~~~~d~~~~~W~~lp~~~r~~~~~~~~--~~~i~v~gG~~~~~~~~i~~yd~~~~~ 336 (358)
++. -.+.|..+|..+ . ++... ++.+|++-| +..|+||..+.+
T Consensus 161 ------Pr~--------i~~~w~g~p~~i--d-aAf~~~~~g~~YfFkg------~~y~~~~~~~~~ 204 (218)
T 1gen_A 161 ------PKL--------IADAWNAIPDNL--D-AVVDLQGGGHSYFFKG------AYYLKLENQSLK 204 (218)
T ss_dssp ------CEE--------HHHHSSSCCSSC--S-EEEECTTTCEEEEEET------TEEEEEETTEEE
T ss_pred ------Ccc--------hhhccCCCCCCC--C-EEEEEcCCCcEEEEEC------CEEEEEECCcee
Confidence 110 012344444332 2 23333 489999988 479999987654
No 204
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=85.48 E-value=9.2 Score=39.43 Aligned_cols=177 Identities=11% Similarity=0.087 Sum_probs=86.3
Q ss_pred eEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeee
Q 018336 103 GVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAA 182 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~ 182 (358)
.+..||..+++......-... ........-++..++.|+.+ ..+.+||..+.....+...... -...
T Consensus 984 ~i~i~d~~~~~~~~~~~~h~~----~v~~l~~s~dg~~l~s~~~d-------g~i~vwd~~~~~~~~~~~~~~~--v~~~ 1050 (1249)
T 3sfz_A 984 AIKIIELPNNRVFSSGVGHKK----AVRHIQFTADGKTLISSSED-------SVIQVWNWQTGDYVFLQAHQET--VKDF 1050 (1249)
T ss_dssp CCEEEETTTTSCEEECCCCSS----CCCCEEECSSSSCEEEECSS-------SBEEEEETTTTEEECCBCCSSC--EEEE
T ss_pred CEEEEEcCCCceeeecccCCC----ceEEEEECCCCCEEEEEcCC-------CEEEEEECCCCceEEEecCCCc--EEEE
Confidence 466777776654332211110 11112223355666666643 3689999998877644322211 1222
Q ss_pred EEECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEEECCEEEEEeCcccCCCCceeeeeEEEECCC
Q 018336 183 GELNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVVIGSEFWVVSGYKTERQGIFDESAESYQLGT 262 (358)
Q Consensus 183 ~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~ 262 (358)
+...+..++.|+.+ ..+.+||..+++-...-.............-++++++.|+.+ ..+..||..+
T Consensus 1051 ~~~~~~~l~~~~~d------g~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d--------~~v~iwd~~~ 1116 (1249)
T 3sfz_A 1051 RLLQDSRLLSWSFD------GTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSAD--------KTAKIWSFDL 1116 (1249)
T ss_dssp EECSSSEEEEEESS------SEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCS--------SCCCEECSSS
T ss_pred EEcCCCcEEEEECC------CcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCC--------CcEEEEECCC
Confidence 22333334454433 358999998765322111111111112223466677777653 2456788776
Q ss_pred CceEEcCCccccCCCCCceeeeeecCccCceeccccceeeceEEEEeCCeEEEECCCCCCCCceEEEEECCCCc
Q 018336 263 GEWKRAENAWKLSQCPRSNVGVGREGKLFCWAETEAAVQFGTCRVELGGCTLVTGSGYQGGPQEFYVVEGRNGK 336 (358)
Q Consensus 263 ~~W~~~~~~p~~~~~~~~~~~~~~d~~~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~~~~~~i~~yd~~~~~ 336 (358)
++ .+..+. .+... ..+.....++++++.|+.+ ..|.+||..+++
T Consensus 1117 ~~--~~~~l~-----~h~~~-------------------v~~~~~s~dg~~lat~~~d----g~i~vwd~~~~~ 1160 (1249)
T 3sfz_A 1117 LS--PLHELK-----GHNGC-------------------VRCSAFSLDGILLATGDDN----GEIRIWNVSDGQ 1160 (1249)
T ss_dssp SS--CSBCCC-----CCSSC-------------------EEEEEECSSSSEEEEEETT----SCCCEEESSSSC
T ss_pred cc--eeeeec-----cCCCc-------------------EEEEEECCCCCEEEEEeCC----CEEEEEECCCCc
Confidence 53 122221 11100 1112234467788888764 467888887655
No 205
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=85.43 E-value=16 Score=30.98 Aligned_cols=139 Identities=12% Similarity=0.092 Sum_probs=68.0
Q ss_pred eEEEEeCCCCCee-ecCCCCCCCCCCCceeEEEEEC----CEEEEEcCcCCCCCCCcceeEEEECCCCcEEe-CCCCCCC
Q 018336 103 GVTVFDPVSLTWD-RLGPVPEYPAGLPLFCQVASSQ----GKLVVMGGWDPASYSPVSHVFVYDFTTRRWTR-GKNMPDN 176 (358)
Q Consensus 103 ~~~~~d~~~~~W~-~~~~~~~~~~~~~~~~~~~~~~----~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~-~~~~~~~ 176 (358)
.+..||..++... .+.....+.............+ +.+++.|+.+ ..+.+||..+.+-.. +.....
T Consensus 45 ~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d-------g~i~v~d~~~~~~~~~~~~~~~- 116 (366)
T 3k26_A 45 RVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSR-------GIIRIINPITMQCIKHYVGHGN- 116 (366)
T ss_dssp EEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETT-------CEEEEECTTTCCEEEEEESCCS-
T ss_pred EEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCC-------CEEEEEEchhceEeeeecCCCC-
Confidence 5778888765432 2222111111111222222333 4677777643 378999988765322 211111
Q ss_pred ceeeeeEEE--CCEEEEEcCcCCCCCCCCeEEEEECCCCceEec-CCCccCcCceeEEEE--CCEEEEEeCcccCCCCce
Q 018336 177 RSFFAAGEL--NGRVIIAGGHDENKTALSSAWAYDLIKDEWTEL-ARMTQERDECEAVVI--GSEFWVVSGYKTERQGIF 251 (358)
Q Consensus 177 ~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~-~~~p~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~ 251 (358)
.-.+++.. ++.+++.|+.+ ..+.+||..+++-... ..+.........+.+ +++.++.|+.+
T Consensus 117 -~i~~~~~~~~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------- 182 (366)
T 3k26_A 117 -AINELKFHPRDPNLLLSVSKD------HALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMD------- 182 (366)
T ss_dssp -CEEEEEECSSCTTEEEEEETT------SCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETT-------
T ss_pred -cEEEEEECCCCCCEEEEEeCC------CeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCC-------
Confidence 11122221 55677776654 3599999987754332 111222222222322 46666666543
Q ss_pred eeeeEEEECCCCc
Q 018336 252 DESAESYQLGTGE 264 (358)
Q Consensus 252 ~~~i~~yd~~~~~ 264 (358)
..+..||..+.+
T Consensus 183 -g~i~i~d~~~~~ 194 (366)
T 3k26_A 183 -HSLKLWRINSKR 194 (366)
T ss_dssp -SCEEEEESCSHH
T ss_pred -CCEEEEECCCCc
Confidence 356788887653
No 206
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=85.35 E-value=8.1 Score=32.92 Aligned_cols=107 Identities=10% Similarity=0.047 Sum_probs=51.3
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEe-CCCCCCCceeeeeEEE-CCEEEEEcCcCCCCCCCCeEEEEECCCCc
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTR-GKNMPDNRSFFAAGEL-NGRVIIAGGHDENKTALSSAWAYDLIKDE 214 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~-~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~ 214 (358)
++.+++.|+.+ ..+.+||..+.+-.. +..-..+ -.+++.. ++..++.|+.+ ..+.+||..+++
T Consensus 43 ~~~~l~~~~~d-------g~i~vwd~~~~~~~~~~~~h~~~--v~~~~~~~~~~~l~s~~~d------g~i~iwd~~~~~ 107 (369)
T 3zwl_B 43 EGDLLFSCSKD-------SSASVWYSLNGERLGTLDGHTGT--IWSIDVDCFTKYCVTGSAD------YSIKLWDVSNGQ 107 (369)
T ss_dssp TSCEEEEEESS-------SCEEEEETTTCCEEEEECCCSSC--EEEEEECTTSSEEEEEETT------TEEEEEETTTCC
T ss_pred CCCEEEEEeCC-------CEEEEEeCCCchhhhhhhhcCCc--EEEEEEcCCCCEEEEEeCC------CeEEEEECCCCc
Confidence 45555555532 368889987765432 2211111 1122222 45566666543 369999998876
Q ss_pred eEecCCCccCcCceeEE-EECCEEEEEeCcccCCCCceeeeeEEEECCCC
Q 018336 215 WTELARMTQERDECEAV-VIGSEFWVVSGYKTERQGIFDESAESYQLGTG 263 (358)
Q Consensus 215 W~~~~~~p~~~~~~~~~-~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~ 263 (358)
-...-..+.. ...+. .-+++.++.++..... ....+..||..+.
T Consensus 108 ~~~~~~~~~~--v~~~~~~~~~~~l~~~~~~~~~---~~g~i~~~d~~~~ 152 (369)
T 3zwl_B 108 CVATWKSPVP--VKRVEFSPCGNYFLAILDNVMK---NPGSINIYEIERD 152 (369)
T ss_dssp EEEEEECSSC--EEEEEECTTSSEEEEEECCBTT---BCCEEEEEEEEEC
T ss_pred EEEEeecCCC--eEEEEEccCCCEEEEecCCccC---CCCEEEEEEecCC
Confidence 5433222111 11222 2245555555432111 1245677776543
No 207
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=85.22 E-value=16 Score=30.76 Aligned_cols=90 Identities=13% Similarity=0.087 Sum_probs=46.4
Q ss_pred eEEEEeCCCCC----eeecCCCCCCCCCCCceeEEEEECCE-EEEEcCcCCCCCCCcceeEEEEC-CCCcEEeCCC--CC
Q 018336 103 GVTVFDPVSLT----WDRLGPVPEYPAGLPLFCQVASSQGK-LVVMGGWDPASYSPVSHVFVYDF-TTRRWTRGKN--MP 174 (358)
Q Consensus 103 ~~~~~d~~~~~----W~~~~~~~~~~~~~~~~~~~~~~~~~-lyv~Gg~~~~~~~~~~~~~~yd~-~t~~W~~~~~--~~ 174 (358)
.+..||..+.. -..+..... ........-++. .++.|+.+ ..+.+||. .+.+...+.. ..
T Consensus 34 ~v~iw~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~l~~~~~d-------g~i~~wd~~~~~~~~~~~~~~~~ 101 (342)
T 1yfq_A 34 SLTVYKFDIQAKNVDLLQSLRYKH-----PLLCCNFIDNTDLQIYVGTVQ-------GEILKVDLIGSPSFQALTNNEAN 101 (342)
T ss_dssp EEEEEEEETTTTEEEEEEEEECSS-----CEEEEEEEESSSEEEEEEETT-------SCEEEECSSSSSSEEECBSCCCC
T ss_pred eEEEEEeCCCCccccceeeeecCC-----ceEEEEECCCCCcEEEEEcCC-------CeEEEEEeccCCceEeccccCCC
Confidence 56777776665 322221111 122222233566 66666643 36999999 8887766544 22
Q ss_pred CCceeeeeEEECCEEEEEcCcCCCCCCCCeEEEEECCC
Q 018336 175 DNRSFFAAGELNGRVIIAGGHDENKTALSSAWAYDLIK 212 (358)
Q Consensus 175 ~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t 212 (358)
.+.. +++...+..++.|+.+ ..+.+||..+
T Consensus 102 ~~v~--~l~~~~~~~l~s~~~d------~~i~iwd~~~ 131 (342)
T 1yfq_A 102 LGIC--RICKYGDDKLIAASWD------GLIEVIDPRN 131 (342)
T ss_dssp SCEE--EEEEETTTEEEEEETT------SEEEEECHHH
T ss_pred CceE--EEEeCCCCEEEEEcCC------CeEEEEcccc
Confidence 2222 2222224455555433 3588888764
No 208
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=85.16 E-value=22 Score=32.30 Aligned_cols=48 Identities=10% Similarity=0.077 Sum_probs=31.3
Q ss_pred eEEEEeCCCCCeeec--CCCCCCCCCCCceeEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCCc
Q 018336 103 GVTVFDPVSLTWDRL--GPVPEYPAGLPLFCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRR 166 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~--~~~~~~~~~~~~~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~ 166 (358)
..+.||..+++.... +.+|. -.++....+++|++-| +..|+||+.+++
T Consensus 168 ~yw~yd~~~~~~~~~~w~gi~~-------iDAA~~~~g~~YfFkG---------~~y~rfd~~~~~ 217 (460)
T 1qhu_A 168 RKWFWDLTTGTKKERSWPAVGN-------CTSALRWLGRYYCFQG---------NQFLRFNPVSGE 217 (460)
T ss_dssp EEEEEETTTTEEEEECCTTSCC-------CSEEEEETTEEEEEET---------TEEEEECTTTCC
T ss_pred cEEEEecccceeecccCCCCCc-------cchheeeCCceEEEEC---------CEEEEEcCccCc
Confidence 578899887754321 22222 1255566799999987 368899887654
No 209
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=85.08 E-value=18 Score=31.23 Aligned_cols=154 Identities=9% Similarity=-0.043 Sum_probs=77.4
Q ss_pred ceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEECC-EEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceee
Q 018336 102 YGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASSQG-KLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFF 180 (358)
Q Consensus 102 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~-~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~ 180 (358)
..++.+|..+++-..+...+... .......-++ .|+.... ...++++|..+.+-+.+...+......
T Consensus 60 ~~l~~~d~~~g~~~~lt~~~~~~----~~~~~~spdg~~l~~~~~--------~~~l~~~d~~~g~~~~~~~~~~~~~~~ 127 (388)
T 3pe7_A 60 WNYYLLDLNTQVATQLTEGRGDN----TFGGFLSPDDDALFYVKD--------GRNLMRVDLATLEENVVYQVPAEWVGY 127 (388)
T ss_dssp CEEEEEETTTCEEEECCCSSCBC----SSSCEECTTSSEEEEEET--------TTEEEEEETTTCCEEEEEECCTTEEEE
T ss_pred ceEEEEeCCCCceEEeeeCCCCC----ccceEEcCCCCEEEEEeC--------CCeEEEEECCCCcceeeeechhhcccc
Confidence 36889999998887776544321 1111223344 4544442 137999999998776655444433222
Q ss_pred eeEE--ECCEEEEEcCcCC----------------CCCCCCeEEEEECCCCceEecCCCccCcCceeEEEE-CCEEEEEe
Q 018336 181 AAGE--LNGRVIIAGGHDE----------------NKTALSSAWAYDLIKDEWTELARMTQERDECEAVVI-GSEFWVVS 241 (358)
Q Consensus 181 ~~~~--~~~~iyv~GG~~~----------------~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~-~~~lyv~g 241 (358)
.... -++..++.--... .......++.+|+.++.-+.+...+.. .......- +|+..++.
T Consensus 128 ~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~-~~~~~~sp~dg~~l~~~ 206 (388)
T 3pe7_A 128 GTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQW-LGHPIYRPYDDSTVAFC 206 (388)
T ss_dssp EEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSC-EEEEEEETTEEEEEEEE
T ss_pred cceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCcc-ccccEECCCCCCEEEEE
Confidence 2211 2333332110000 011236799999998876655422211 11112232 45543333
Q ss_pred CcccCCCCceeeeeEEEECCCCceEEcCC
Q 018336 242 GYKTERQGIFDESAESYQLGTGEWKRAEN 270 (358)
Q Consensus 242 G~~~~~~~~~~~~i~~yd~~~~~W~~~~~ 270 (358)
...... .....++.+|..+.....+..
T Consensus 207 ~~~~~~--~~~~~l~~~d~~~~~~~~l~~ 233 (388)
T 3pe7_A 207 HEGPHD--LVDARMWLINEDGTNMRKVKT 233 (388)
T ss_dssp ECSCTT--TSSCSEEEEETTSCCCEESCC
T ss_pred EecCCC--CCcceEEEEeCCCCceEEeee
Confidence 221111 113478889988776666543
No 210
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=84.86 E-value=21 Score=31.83 Aligned_cols=106 Identities=8% Similarity=0.017 Sum_probs=54.1
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEe--CCCCCCCc-eeeeeE-EEC---CEEEEEcCcCCCCCCCCeEEEEE
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTR--GKNMPDNR-SFFAAG-ELN---GRVIIAGGHDENKTALSSAWAYD 209 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~--~~~~~~~~-~~~~~~-~~~---~~iyv~GG~~~~~~~~~~~~~yd 209 (358)
++..++.|+. ...+++++..+..... +..+.... .-.+++ .-+ +.+++.|+.+ ..+.+||
T Consensus 160 ~~~~l~~~~~-------~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d------~~i~vwd 226 (450)
T 2vdu_B 160 DDTTVIIADK-------FGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRD------EHIKISH 226 (450)
T ss_dssp TSSEEEEEET-------TSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETT------SCEEEEE
T ss_pred CCCEEEEEeC-------CCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCC------CcEEEEE
Confidence 4555555543 2368888887655331 11111111 111222 235 7777777654 3588999
Q ss_pred CCCCceEec--CCCccCcCceeEEEECCEEEEEeCcccCCCCceeeeeEEEECCCCce
Q 018336 210 LIKDEWTEL--ARMTQERDECEAVVIGSEFWVVSGYKTERQGIFDESAESYQLGTGEW 265 (358)
Q Consensus 210 ~~t~~W~~~--~~~p~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W 265 (358)
..+...... ...... ....... ++++++.|+.+ ..+.+||..+++-
T Consensus 227 ~~~~~~~~~~~~~h~~~-v~~~~~s-d~~~l~s~~~d--------~~v~vwd~~~~~~ 274 (450)
T 2vdu_B 227 YPQCFIVDKWLFGHKHF-VSSICCG-KDYLLLSAGGD--------DKIFAWDWKTGKN 274 (450)
T ss_dssp ESCTTCEEEECCCCSSC-EEEEEEC-STTEEEEEESS--------SEEEEEETTTCCE
T ss_pred CCCCceeeeeecCCCCc-eEEEEEC-CCCEEEEEeCC--------CeEEEEECCCCcE
Confidence 877653321 111111 1111123 77777777642 3577888887653
No 211
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=84.70 E-value=28 Score=33.14 Aligned_cols=153 Identities=12% Similarity=0.056 Sum_probs=77.2
Q ss_pred cceeEEEECCCCcEEeCCCCCCCceeeeeEEE--CCE-EEEEcCcCCCCCCCCeEEEEECCCC-ceEecCCCccCcC---
Q 018336 154 VSHVFVYDFTTRRWTRGKNMPDNRSFFAAGEL--NGR-VIIAGGHDENKTALSSAWAYDLIKD-EWTELARMTQERD--- 226 (358)
Q Consensus 154 ~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~yd~~t~-~W~~~~~~p~~~~--- 226 (358)
...++++|..+.+-..+............... +++ |++. ..+.. .....+..+|..++ ..+.+........
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~-~~~~~-~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~ 311 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVA-EVNRA-QNECKVNAYDAETGRFVRTLFVETDKHYVEP 311 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEE-EECTT-SCEEEEEEEETTTCCEEEEEEEEECSSCCCC
T ss_pred eeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEE-EeCCC-CCeeEEEEEECCCCceeeEEEEccCCCeECc
Confidence 46799999998876665432211122222222 454 4443 32221 22357899999988 6665532111110
Q ss_pred -ceeEEEE--CCEEEEEeCcccCCCCceeeeeEEEECCCCceEEcCCccccCCCCCceeeeeecCccCceeccccceeec
Q 018336 227 -ECEAVVI--GSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRAENAWKLSQCPRSNVGVGREGKLFCWAETEAAVQFG 303 (358)
Q Consensus 227 -~~~~~~~--~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~d~~~~~W~~lp~~~r~~ 303 (358)
......- +|++++.+...+ ...++.+|...+....+..-. .... .
T Consensus 312 ~~~~~~sp~~dg~~l~~~~~~g------~~~l~~~~~~~~~~~~l~~~~----~~v~----------------------~ 359 (706)
T 2z3z_A 312 LHPLTFLPGSNNQFIWQSRRDG------WNHLYLYDTTGRLIRQVTKGE----WEVT----------------------N 359 (706)
T ss_dssp CSCCEECTTCSSEEEEEECTTS------SCEEEEEETTSCEEEECCCSS----SCEE----------------------E
T ss_pred cCCceeecCCCCEEEEEEccCC------ccEEEEEECCCCEEEecCCCC----eEEE----------------------e
Confidence 1112233 778665554321 346777887666666654311 0000 0
Q ss_pred eEEEEeCC-eEEEECCCCCCCCceEEEEECCCCceEee
Q 018336 304 TCRVELGG-CTLVTGSGYQGGPQEFYVVEGRNGKFRKF 340 (358)
Q Consensus 304 ~~~~~~~~-~i~v~gG~~~~~~~~i~~yd~~~~~W~~~ 340 (358)
.....-++ .||+.+.........+|.+|..+.+.+.+
T Consensus 360 ~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l 397 (706)
T 2z3z_A 360 FAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTKDL 397 (706)
T ss_dssp EEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCEES
T ss_pred eeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCceec
Confidence 00122233 56555544322225888999888776665
No 212
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=84.69 E-value=18 Score=30.81 Aligned_cols=141 Identities=13% Similarity=0.061 Sum_probs=75.5
Q ss_pred eEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEE-CCEEEEEcCcCCCCCCCcceeEEEECCCC--cEEeCCCC------
Q 018336 103 GVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASS-QGKLVVMGGWDPASYSPVSHVFVYDFTTR--RWTRGKNM------ 173 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~--~W~~~~~~------ 173 (358)
.+..+|+.+++-........ +.....++.. ++.||+.... ...+.+||+... .-..+...
T Consensus 70 ~i~~~d~~~g~~~~~~~~~~----~~~p~gia~d~~g~l~v~d~~-------~~~v~~~~~~g~~~~~~~~~~~~~~g~~ 138 (329)
T 3fvz_A 70 TILVIDPNNAEILQSSGKNL----FYLPHGLSIDTDGNYWVTDVA-------LHQVFKLDPHSKEGPLLILGRSMQPGSD 138 (329)
T ss_dssp CEEEECTTTCCEEEEECTTT----CSSEEEEEECTTSCEEEEETT-------TTEEEEECTTCSSCCSEEESBTTBCCCS
T ss_pred cEEEEECCCCeEEeccCCCc----cCCceEEEECCCCCEEEEECC-------CCEEEEEeCCCCeEEEEEecccCCCCCC
Confidence 68899998777543321111 0112234333 6779988653 347999998765 22222210
Q ss_pred CCCceee-eeEEE--CCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCC-------ccCcCceeEEEE--C-CEEEEE
Q 018336 174 PDNRSFF-AAGEL--NGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARM-------TQERDECEAVVI--G-SEFWVV 240 (358)
Q Consensus 174 ~~~~~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~-------p~~~~~~~~~~~--~-~~lyv~ 240 (358)
....... ..+.. ++.+|+..++. ...+.+||.....-..+... +........+.+ + +.|||.
T Consensus 139 ~~~~~~P~~ia~~~~~g~lyv~d~~~-----~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~ 213 (329)
T 3fvz_A 139 QNHFCQPTDVAVEPSTGAVFVSDGYC-----NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVA 213 (329)
T ss_dssp TTCCSSEEEEEECTTTCCEEEEECSS-----CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEE
T ss_pred ccccCCCcEEEEeCCCCeEEEEeCCC-----CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEE
Confidence 1111122 33333 68899996522 24689999654433333211 111122233333 3 789998
Q ss_pred eCcccCCCCceeeeeEEEECCCCceEE
Q 018336 241 SGYKTERQGIFDESAESYQLGTGEWKR 267 (358)
Q Consensus 241 gG~~~~~~~~~~~~i~~yd~~~~~W~~ 267 (358)
... ...|.+||+.+++...
T Consensus 214 d~~--------~~~I~~~~~~~G~~~~ 232 (329)
T 3fvz_A 214 DRE--------NGRIQCFKTDTKEFVR 232 (329)
T ss_dssp ETT--------TTEEEEEETTTCCEEE
T ss_pred ECC--------CCEEEEEECCCCcEEE
Confidence 743 3468899999776644
No 213
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=84.59 E-value=30 Score=33.40 Aligned_cols=148 Identities=14% Similarity=0.087 Sum_probs=81.0
Q ss_pred ceEEEEeCCCC--C-eeecCCCCCCCCCCCceeEEEEECCEEEEEcCcCCCCCCCcceeEEEECCC--CcEEeCCCCCCC
Q 018336 102 YGVTVFDPVSL--T-WDRLGPVPEYPAGLPLFCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTT--RRWTRGKNMPDN 176 (358)
Q Consensus 102 ~~~~~~d~~~~--~-W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t--~~W~~~~~~~~~ 176 (358)
..++.+|..+. . |..+..... .....+...++.||+....+. ....++++|..+ ..|+.+-+-...
T Consensus 294 ~~l~~~d~~~~~~~~~~~l~~~~~-----~~~~~~~~dg~~l~~~s~~~~----~~~~l~~~d~~~~~~~~~~l~~~~~~ 364 (741)
T 1yr2_A 294 NTVHVARVTNGKIGPVTALIPDLK-----AQWDFVDGVGDQLWFVSGDGA----PLKKIVRVDLSGSTPRFDTVVPESKD 364 (741)
T ss_dssp CEEEEEEEETTEECCCEEEECSSS-----SCEEEEEEETTEEEEEECTTC----TTCEEEEEECSSSSCEEEEEECCCSS
T ss_pred ceEEEEECCCCCCcccEEecCCCC-----ceEEEEeccCCEEEEEECCCC----CCCEEEEEeCCCCccccEEEecCCCC
Confidence 47888888776 6 777654322 112223345777887765321 235799999887 578876432211
Q ss_pred ceeeeeEEECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEE--ECCE-EEEEeCcccCCCCceee
Q 018336 177 RSFFAAGELNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVV--IGSE-FWVVSGYKTERQGIFDE 253 (358)
Q Consensus 177 ~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~--~~~~-lyv~gG~~~~~~~~~~~ 253 (358)
. -......++.+++....+. ...++.++...+.-+.+. +|.... ...+. -+++ |++.. .+.. ...
T Consensus 365 ~-l~~~~~~~~~lv~~~~~dg----~~~l~~~~~~g~~~~~l~-~~~~~~-v~~~~~s~d~~~l~~~~-ss~~----~P~ 432 (741)
T 1yr2_A 365 N-LESVGIAGNRLFASYIHDA----KSQVLAFDLDGKPAGAVS-LPGIGS-ASGLSGRPGDRHAYLSF-SSFT----QPA 432 (741)
T ss_dssp E-EEEEEEEBTEEEEEEEETT----EEEEEEEETTSCEEEECB-CSSSCE-EEEEECCBTCSCEEEEE-EETT----EEE
T ss_pred e-EEEEEEECCEEEEEEEECC----EEEEEEEeCCCCceeecc-CCCCeE-EEEeecCCCCCEEEEEE-cCCC----CCC
Confidence 1 1122334778877754332 356888887554444443 222111 11121 2343 43332 1111 256
Q ss_pred eeEEEECCCCceEEcCC
Q 018336 254 SAESYQLGTGEWKRAEN 270 (358)
Q Consensus 254 ~i~~yd~~~~~W~~~~~ 270 (358)
.++.||..+++.+.+..
T Consensus 433 ~i~~~d~~tg~~~~l~~ 449 (741)
T 1yr2_A 433 TVLALDPATAKTTPWEP 449 (741)
T ss_dssp EEEEEETTTTEEEECSC
T ss_pred EEEEEECCCCcEEEEec
Confidence 78999999988777654
No 214
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=84.43 E-value=17 Score=30.32 Aligned_cols=63 Identities=11% Similarity=0.304 Sum_probs=34.5
Q ss_pred CEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEEE--C--CEEEEEcCcCCCCCCCCeEEEEECCCC
Q 018336 138 GKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGEL--N--GRVIIAGGHDENKTALSSAWAYDLIKD 213 (358)
Q Consensus 138 ~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~yd~~t~ 213 (358)
+.+++.|+.+ ..+.+||..+.+|..+..+.........+.. + +.+++.|+.+ ..+.+||..++
T Consensus 67 g~~l~s~s~D-------~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d------~~v~~wd~~~~ 133 (297)
T 2pm7_B 67 GTILASCSYD-------GKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD------GKVSVVEFKEN 133 (297)
T ss_dssp CSEEEEEETT-------TEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEEBCSS
T ss_pred CCEEEEEcCC-------CEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECC------CcEEEEEecCC
Confidence 5667777643 3688999988777554322211111112222 1 4556666543 35788887654
No 215
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=84.28 E-value=17 Score=30.43 Aligned_cols=126 Identities=14% Similarity=0.202 Sum_probs=61.2
Q ss_pred eEEEEeCC-CCCeeecCCCCCCCCCCCceeEEEEE-CCEEEEEcCcCCCCCCCcceeEEEECCCC-cEEeCCCCCCCcee
Q 018336 103 GVTVFDPV-SLTWDRLGPVPEYPAGLPLFCQVASS-QGKLVVMGGWDPASYSPVSHVFVYDFTTR-RWTRGKNMPDNRSF 179 (358)
Q Consensus 103 ~~~~~d~~-~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~-~W~~~~~~~~~~~~ 179 (358)
.+.+||+. ...|......+. ....+.. ++.||+... ...+++||+... .|..-.+ ... .
T Consensus 118 ~l~~~d~~g~~~~~~~~~~~~-------~~~~~~~~~g~l~vgt~--------~~~l~~~d~~g~~~~~~~~~--~~~-~ 179 (330)
T 3hxj_A 118 HLYAINTDGTEKWRFKTKKAI-------YATPIVSEDGTIYVGSN--------DNYLYAINPDGTEKWRFKTN--DAI-T 179 (330)
T ss_dssp EEEEECTTSCEEEEEECSSCC-------CSCCEECTTSCEEEECT--------TSEEEEECTTSCEEEEEECS--SCC-C
T ss_pred EEEEEcCCCCEEEEEcCCCce-------eeeeEEcCCCEEEEEcC--------CCEEEEECCCCCEeEEEecC--CCc-e
Confidence 57889987 334654332111 1122333 667777432 246888998722 2544321 111 1
Q ss_pred eeeEE-ECCEEEEEcCcCCCCCCCCeEEEEECC-CCceEecCCCccCcCceeEEEE-CCEEEEEeCcccCCCCceeeeeE
Q 018336 180 FAAGE-LNGRVIIAGGHDENKTALSSAWAYDLI-KDEWTELARMTQERDECEAVVI-GSEFWVVSGYKTERQGIFDESAE 256 (358)
Q Consensus 180 ~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~-t~~W~~~~~~p~~~~~~~~~~~-~~~lyv~gG~~~~~~~~~~~~i~ 256 (358)
.+.+. .++.+|+.. ..+++||.. ...|+...... . ....+.. +|.||+... ...+.
T Consensus 180 ~~~~~d~~g~l~v~t---------~~l~~~d~~g~~~~~~~~~~~--~-~~~~~~~~~g~l~v~t~---------~~gl~ 238 (330)
T 3hxj_A 180 SAASIGKDGTIYFGS---------DKVYAINPDGTEKWNFYAGYW--T-VTRPAISEDGTIYVTSL---------DGHLY 238 (330)
T ss_dssp SCCEECTTCCEEEES---------SSEEEECTTSCEEEEECCSSC--C-CSCCEECTTSCEEEEET---------TTEEE
T ss_pred eeeEEcCCCEEEEEe---------CEEEEECCCCcEEEEEccCCc--c-eeceEECCCCeEEEEcC---------CCeEE
Confidence 12223 356777653 348888843 23466443211 1 1122232 457777542 12467
Q ss_pred EEECCCCc-eEE
Q 018336 257 SYQLGTGE-WKR 267 (358)
Q Consensus 257 ~yd~~~~~-W~~ 267 (358)
+||+.... |..
T Consensus 239 ~~~~~g~~~~~~ 250 (330)
T 3hxj_A 239 AINPDGTEKWRF 250 (330)
T ss_dssp EECTTSCEEEEE
T ss_pred EECCCCCEeEEe
Confidence 77765443 543
No 216
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=84.17 E-value=28 Score=32.69 Aligned_cols=72 Identities=22% Similarity=0.330 Sum_probs=46.5
Q ss_pred eeEEECCEEEEEcCcCCCCCCCCeEEEEECCCC--ceEecCCCccCc------CceeEEEECCEEEEEeCcccCCCCcee
Q 018336 181 AAGELNGRVIIAGGHDENKTALSSAWAYDLIKD--EWTELARMTQER------DECEAVVIGSEFWVVSGYKTERQGIFD 252 (358)
Q Consensus 181 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~--~W~~~~~~p~~~------~~~~~~~~~~~lyv~gG~~~~~~~~~~ 252 (358)
+.++.++.+|+.... ..++++|.+++ .|+.-...+... .....++.+++||+... .
T Consensus 63 ~P~v~~g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~---------d 126 (582)
T 1flg_A 63 QAIVSDGVIYVTASY-------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL---------D 126 (582)
T ss_dssp CCEEETTEEEEEETT-------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET---------T
T ss_pred ccEEECCEEEEEcCC-------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC---------C
Confidence 345679999998542 24999999876 488654332210 11234578899988642 2
Q ss_pred eeeEEEECCCCc--eEEc
Q 018336 253 ESAESYQLGTGE--WKRA 268 (358)
Q Consensus 253 ~~i~~yd~~~~~--W~~~ 268 (358)
..++++|.++++ |+.-
T Consensus 127 g~l~AlD~~TG~~~W~~~ 144 (582)
T 1flg_A 127 ASVVALNKNTGKVVWKKK 144 (582)
T ss_dssp TEEEEEESSSCCEEEEEE
T ss_pred CEEEEEECCCCCEEeeec
Confidence 367899998875 8753
No 217
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=84.04 E-value=17 Score=30.38 Aligned_cols=100 Identities=8% Similarity=0.006 Sum_probs=50.4
Q ss_pred cceeEEEECCCCcEEeCCCCCCCceeeeeEEE-CC-EEEEEcCcCCCCCCCCeEEEEECCCCceEe---cCCCccCcCce
Q 018336 154 VSHVFVYDFTTRRWTRGKNMPDNRSFFAAGEL-NG-RVIIAGGHDENKTALSSAWAYDLIKDEWTE---LARMTQERDEC 228 (358)
Q Consensus 154 ~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~---~~~~p~~~~~~ 228 (358)
...+++||+.+++.+.+. .... ..+.+.. ++ .+|+....... .....+++|+...+.... +...+... ..
T Consensus 168 ~~~v~~~d~~~g~~~~~~--~~~~-p~gl~~spdg~~lyv~~~~~~~-~~~~~i~~~~~~~~~l~~~~~~~~~~~~~-pd 242 (305)
T 3dr2_A 168 HHSVYRLPPDGSPLQRMA--DLDH-PNGLAFSPDEQTLYVSQTPEQG-HGSVEITAFAWRDGALHDRRHFASVPDGL-PD 242 (305)
T ss_dssp CEEEEEECSSSCCCEEEE--EESS-EEEEEECTTSSEEEEEECCC----CCCEEEEEEEETTEEEEEEEEECCSSSC-CC
T ss_pred CCeEEEEcCCCCcEEEEe--cCCC-CcceEEcCCCCEEEEEecCCcC-CCCCEEEEEEecCCCccCCeEEEECCCCC-CC
Confidence 357999999888876653 1111 1222322 34 58887432110 112578999887654221 11111111 11
Q ss_pred eEE-EECCEEEEEeCcccCCCCceeeeeEEEECCCCceEEc
Q 018336 229 EAV-VIGSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRA 268 (358)
Q Consensus 229 ~~~-~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~ 268 (358)
.++ --+|+||+..+ ..|.+||+....-..+
T Consensus 243 gi~~d~~G~lwv~~~----------~gv~~~~~~g~~~~~~ 273 (305)
T 3dr2_A 243 GFCVDRGGWLWSSSG----------TGVCVFDSDGQLLGHI 273 (305)
T ss_dssp SEEECTTSCEEECCS----------SEEEEECTTSCEEEEE
T ss_pred eEEECCCCCEEEecC----------CcEEEECCCCCEEEEE
Confidence 222 23567777641 2478899966544444
No 218
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=83.86 E-value=31 Score=33.01 Aligned_cols=62 Identities=3% Similarity=-0.148 Sum_probs=32.5
Q ss_pred eEEEEECCC-CceEecCCC-ccCcC-ceeEEEECCEEEEEeCcccCCCCceeeeeEEEECCCCceEEcC
Q 018336 204 SAWAYDLIK-DEWTELARM-TQERD-ECEAVVIGSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRAE 269 (358)
Q Consensus 204 ~~~~yd~~t-~~W~~~~~~-p~~~~-~~~~~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~ 269 (358)
.++++|..+ +.-+.+... ..... ..... -||+..+++...... ....++.+|+.+++...+.
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~---~~~~i~~~d~~~g~~~~~~ 328 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQ---KKLDLVEVTLASNQQRVLA 328 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTS---SEEEEEEEETTTCCEEEEE
T ss_pred EEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccC---CeEEEEEEECCCCceEEEE
Confidence 788889887 765544321 11111 11122 455544443322111 1467899999988776554
No 219
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=83.82 E-value=28 Score=32.57 Aligned_cols=92 Identities=11% Similarity=-0.106 Sum_probs=49.1
Q ss_pred ceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEE--CCEEEEEcCcCCCCCCCcceeEEEECC--CCcEEeCCCCCCCc
Q 018336 102 YGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASS--QGKLVVMGGWDPASYSPVSHVFVYDFT--TRRWTRGKNMPDNR 177 (358)
Q Consensus 102 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~--~~~lyv~Gg~~~~~~~~~~~~~~yd~~--t~~W~~~~~~~~~~ 177 (358)
..+.++|..+++-...-+.... .+.++.. +..+|+.+. ...+.+||.. +.+ .+..++...
T Consensus 177 ~~V~viD~~t~~v~~~i~~g~~------p~~v~~SpDGr~lyv~~~--------dg~V~viD~~~~t~~--~v~~i~~G~ 240 (567)
T 1qks_A 177 GQIALIDGSTYEIKTVLDTGYA------VHISRLSASGRYLFVIGR--------DGKVNMIDLWMKEPT--TVAEIKIGS 240 (567)
T ss_dssp TEEEEEETTTCCEEEEEECSSC------EEEEEECTTSCEEEEEET--------TSEEEEEETTSSSCC--EEEEEECCS
T ss_pred CeEEEEECCCCeEEEEEeCCCC------ccceEECCCCCEEEEEcC--------CCeEEEEECCCCCCc--EeEEEecCC
Confidence 4789999998864432222211 1233332 456787653 2479999996 443 233333332
Q ss_pred eeeeeEEE-----CC-EEEEEcCcCCCCCCCCeEEEEECCCCce
Q 018336 178 SFFAAGEL-----NG-RVIIAGGHDENKTALSSAWAYDLIKDEW 215 (358)
Q Consensus 178 ~~~~~~~~-----~~-~iyv~GG~~~~~~~~~~~~~yd~~t~~W 215 (358)
.-..++.. ++ .+|+..- ....+.++|..+.+=
T Consensus 241 ~P~~ia~s~~~~pDGk~l~v~n~------~~~~v~ViD~~t~~~ 278 (567)
T 1qks_A 241 EARSIETSKMEGWEDKYAIAGAY------WPPQYVIMDGETLEP 278 (567)
T ss_dssp EEEEEEECCSTTCTTTEEEEEEE------ETTEEEEEETTTCCE
T ss_pred CCceeEEccccCCCCCEEEEEEc------cCCeEEEEECCCCcE
Confidence 22233333 44 5776632 135688889777543
No 220
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=83.66 E-value=9.8 Score=35.45 Aligned_cols=99 Identities=13% Similarity=0.062 Sum_probs=52.9
Q ss_pred EEEEeCCCCCeeecCCCCCCCCCCCceeEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeE
Q 018336 104 VTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAG 183 (358)
Q Consensus 104 ~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~ 183 (358)
...||..+++-..+...+. ......-+++..+++..+... ...++++|..+.+++.+..-+... ...+
T Consensus 134 ~~l~d~~~g~~~~l~~~~~-------~~~~~spDG~~la~~~~~~~~---~~~i~~~d~~~g~~~~l~~~~~~~--~~~~ 201 (582)
T 3o4h_A 134 VALYALDGGGLRELARLPG-------FGFVSDIRGDLIAGLGFFGGG---RVSLFTSNLSSGGLRVFDSGEGSF--SSAS 201 (582)
T ss_dssp EEEEEEETTEEEEEEEESS-------CEEEEEEETTEEEEEEEEETT---EEEEEEEETTTCCCEEECCSSCEE--EEEE
T ss_pred ceEEEccCCcEEEeecCCC-------ceEEECCCCCEEEEEEEcCCC---CeEEEEEcCCCCCceEeecCCCcc--ccce
Confidence 3467888777666543222 112333445444443322111 246999999999888764432221 2222
Q ss_pred E-ECCEEEEEcCcCCCCCCCCeEEEEECCCCceEec
Q 018336 184 E-LNGRVIIAGGHDENKTALSSAWAYDLIKDEWTEL 218 (358)
Q Consensus 184 ~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~ 218 (358)
. -+++.++.+..+. ...++++|..++..+.+
T Consensus 202 ~SpDG~~l~~~~~~~----~~~i~~~d~~~~~~~~~ 233 (582)
T 3o4h_A 202 ISPGMKVTAGLETAR----EARLVTVDPRDGSVEDL 233 (582)
T ss_dssp ECTTSCEEEEEECSS----CEEEEEECTTTCCEEEC
T ss_pred ECCCCCEEEEccCCC----eeEEEEEcCCCCcEEEc
Confidence 2 2555444332211 24799999999887733
No 221
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=83.59 E-value=20 Score=30.55 Aligned_cols=134 Identities=14% Similarity=0.232 Sum_probs=62.6
Q ss_pred eEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCCcE--EeCCCCCCCc-ee
Q 018336 103 GVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRRW--TRGKNMPDNR-SF 179 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W--~~~~~~~~~~-~~ 179 (358)
.+..||..+.+-...-+.... ........-++.+++.|+.+ ..+.+||..+..- +....+.... .-
T Consensus 78 ~v~iWd~~~~~~~~~~~~~~~----~v~~~~~s~~~~~l~s~~~d-------~~v~iw~~~~~~~~~~~~~~~~~h~~~v 146 (340)
T 1got_B 78 KLIIWDSYTTNKVHAIPLRSS----WVMTCAYAPSGNYVACGGLD-------NICSIYNLKTREGNVRVSRELAGHTGYL 146 (340)
T ss_dssp EEEEEETTTCCEEEEEECSSS----CEEEEEECTTSSEEEEEETT-------CEEEEEETTTCSBSCEEEEEEECCSSCE
T ss_pred cEEEEECCCCCcceEeecCCc----cEEEEEECCCCCEEEEEeCC-------CeEEEEECccCCCcceeEEEecCCCccE
Confidence 577788776653322111110 11111122255666666643 3688888876431 1111111100 01
Q ss_pred eeeE-EECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEE--ECCEEEEEeCcccCCCCceeeeeE
Q 018336 180 FAAG-ELNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVV--IGSEFWVVSGYKTERQGIFDESAE 256 (358)
Q Consensus 180 ~~~~-~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~--~~~~lyv~gG~~~~~~~~~~~~i~ 256 (358)
.+.. .-++. ++.|+.+ ..+.+||..++.-... +.........+. -++++++.|+.+ ..+.
T Consensus 147 ~~~~~~~~~~-l~s~s~d------~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~sg~~d--------~~v~ 209 (340)
T 1got_B 147 SCCRFLDDNQ-IVTSSGD------TTCALWDIETGQQTTT--FTGHTGDVMSLSLAPDTRLFVSGACD--------ASAK 209 (340)
T ss_dssp EEEEEEETTE-EEEEETT------SCEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETT--------SCEE
T ss_pred EEEEECCCCc-EEEEECC------CcEEEEECCCCcEEEE--EcCCCCceEEEEECCCCCEEEEEeCC--------CcEE
Confidence 1111 23555 4444433 3588999988754321 111111112222 256677777653 3567
Q ss_pred EEECCCCc
Q 018336 257 SYQLGTGE 264 (358)
Q Consensus 257 ~yd~~~~~ 264 (358)
.||+.++.
T Consensus 210 ~wd~~~~~ 217 (340)
T 1got_B 210 LWDVREGM 217 (340)
T ss_dssp EEETTTCS
T ss_pred EEECCCCe
Confidence 88987764
No 222
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=83.41 E-value=19 Score=30.30 Aligned_cols=65 Identities=14% Similarity=0.267 Sum_probs=34.7
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEe-CCCCCCCceeeeeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCc
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTR-GKNMPDNRSFFAAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDE 214 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~-~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~ 214 (358)
++..++.|+.+ ..+.+||..+++-.. +..-..+ -.+.+. -++.+++.|+.+. .+.+||.....
T Consensus 76 dg~~l~s~s~D-------~~v~~wd~~~~~~~~~~~~h~~~--v~~~~~~~~~~~l~s~s~D~------~i~vwd~~~~~ 140 (319)
T 3frx_A 76 DGAYALSASWD-------KTLRLWDVATGETYQRFVGHKSD--VMSVDIDKKASMIISGSRDK------TIKVWTIKGQC 140 (319)
T ss_dssp TSSEEEEEETT-------SEEEEEETTTTEEEEEEECCSSC--EEEEEECTTSCEEEEEETTS------CEEEEETTSCE
T ss_pred CCCEEEEEeCC-------CEEEEEECCCCCeeEEEccCCCc--EEEEEEcCCCCEEEEEeCCC------eEEEEECCCCe
Confidence 55666666643 378999998875322 2111111 111112 2456667766543 48888887554
Q ss_pred eE
Q 018336 215 WT 216 (358)
Q Consensus 215 W~ 216 (358)
-.
T Consensus 141 ~~ 142 (319)
T 3frx_A 141 LA 142 (319)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 223
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=83.13 E-value=33 Score=32.81 Aligned_cols=103 Identities=9% Similarity=0.080 Sum_probs=58.4
Q ss_pred ceeEEEECCCC--cEEeCCCCCCCceeeeeEEECCEEEEEcCcCCCCCCCCeEEEEECCCC---ceEecCCCccCcCcee
Q 018336 155 SHVFVYDFTTR--RWTRGKNMPDNRSFFAAGELNGRVIIAGGHDENKTALSSAWAYDLIKD---EWTELARMTQERDECE 229 (358)
Q Consensus 155 ~~~~~yd~~t~--~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~---~W~~~~~~p~~~~~~~ 229 (358)
++++++|..+. .|+.+..-...... .....++.+|+....+. ....++..|+.+. .|+.+.+-.... ..
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~~~~~~~~-~~~~~g~~l~~~t~~~~---~~~~l~~~d~~~~~~~~~~~l~~~~~~~--~~ 332 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQGDLDADVS-LVDNKGSTLYLLTNRDA---PNRRLVTVDAANPGPAHWRDLIPERQQV--LT 332 (693)
T ss_dssp CEEEEEETTSTTCCCEEEECSSSSCEE-EEEEETTEEEEEECTTC---TTCEEEEEETTSCCGGGCEEEECCCSSC--EE
T ss_pred cEEEEEECCCCCCceEEEeCCCCceEE-EEeccCCEEEEEECCCC---CCCEEEEEeCCCCCccccEEEecCCCCE--EE
Confidence 57888887665 56665432222222 23446788998865432 2357899998763 488764333222 23
Q ss_pred EEEECCEEEEEeCcccCCCCceeeeeEEEECCCCceEEcC
Q 018336 230 AVVIGSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRAE 269 (358)
Q Consensus 230 ~~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~ 269 (358)
....++.|++..... . ...++.+|...+....+.
T Consensus 333 ~s~~g~~lv~~~~~~-g-----~~~l~~~d~~g~~~~~l~ 366 (693)
T 3iuj_A 333 VHSGSGYLFAEYMVD-A-----TARVEQFDYEGKRVREVA 366 (693)
T ss_dssp EEEETTEEEEEEEET-T-----EEEEEEECTTSCEEEEEC
T ss_pred EEEECCEEEEEEEEC-C-----eeEEEEEECCCCeeEEee
Confidence 334555555543221 1 347888998866555443
No 224
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=83.07 E-value=20 Score=30.29 Aligned_cols=63 Identities=5% Similarity=0.084 Sum_probs=36.2
Q ss_pred CEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEEE---CCEEEEEeCcccCCCCceeeeeEEEECCCC
Q 018336 187 GRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVVI---GSEFWVVSGYKTERQGIFDESAESYQLGTG 263 (358)
Q Consensus 187 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~---~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~ 263 (358)
+.+++.|+.+ ..+.+||..++.-.. .+.........+.+ ++++++.|+.+ ..+..||..++
T Consensus 85 ~~~l~~~~~d------g~i~v~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~~l~s~~~d--------g~i~iwd~~~~ 148 (366)
T 3k26_A 85 HPLLAVAGSR------GIIRIINPITMQCIK--HYVGHGNAINELKFHPRDPNLLLSVSKD--------HALRLWNIQTD 148 (366)
T ss_dssp CEEEEEEETT------CEEEEECTTTCCEEE--EEESCCSCEEEEEECSSCTTEEEEEETT--------SCEEEEETTTT
T ss_pred CCEEEEecCC------CEEEEEEchhceEee--eecCCCCcEEEEEECCCCCCEEEEEeCC--------CeEEEEEeecC
Confidence 5677777654 358999988764322 12111112222333 56677777653 35788999877
Q ss_pred ce
Q 018336 264 EW 265 (358)
Q Consensus 264 ~W 265 (358)
+-
T Consensus 149 ~~ 150 (366)
T 3k26_A 149 TL 150 (366)
T ss_dssp EE
T ss_pred eE
Confidence 54
No 225
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=82.98 E-value=22 Score=30.72 Aligned_cols=180 Identities=13% Similarity=0.009 Sum_probs=91.7
Q ss_pred eEEEEeCCCCCeeecCCCCCCCCCCCceeEEEE-ECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeee
Q 018336 103 GVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVAS-SQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFA 181 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~ 181 (358)
.+..+|+.+.+-........ ... .++. -++.+++.++ .+.+.+++..+.................
T Consensus 158 ~i~iwd~~~~~~~~~~~~~~-----~V~-~v~fspdg~~l~s~s--------~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 223 (365)
T 4h5i_A 158 IMRIIDPSDLTEKFEIETRG-----EVK-DLHFSTDGKVVAYIT--------GSSLEVISTVTGSCIARKTDFDKNWSLS 223 (365)
T ss_dssp EEEEEETTTTEEEEEEECSS-----CCC-EEEECTTSSEEEEEC--------SSCEEEEETTTCCEEEEECCCCTTEEEE
T ss_pred EEEEeECCCCcEEEEeCCCC-----ceE-EEEEccCCceEEecc--------ceeEEEEEeccCcceeeeecCCCCCCEE
Confidence 57788888776543322111 112 2332 2566666654 2357788887776543222221221122
Q ss_pred e--EEECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecC--CCccCcCceeEE--EECCEEEEEeCcccCCCCceeeee
Q 018336 182 A--GELNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELA--RMTQERDECEAV--VIGSEFWVVSGYKTERQGIFDESA 255 (358)
Q Consensus 182 ~--~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~--~~p~~~~~~~~~--~~~~~lyv~gG~~~~~~~~~~~~i 255 (358)
. ..-++..++.++.+... ...+..++.......... .+.........+ .-+|++++.|+.+ ..|
T Consensus 224 ~v~fspdg~~l~~~s~d~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D--------~~V 293 (365)
T 4h5i_A 224 KINFIADDTVLIAASLKKGK--GIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASND--------NSI 293 (365)
T ss_dssp EEEEEETTEEEEEEEESSSC--CEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETT--------SCE
T ss_pred EEEEcCCCCEEEEEecCCcc--eeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCC--------CEE
Confidence 2 22477777777655431 234666777665554322 121111112222 2377888888653 357
Q ss_pred EEEECCCCceEEcCCccccCCCCCceeeeeecCccCceeccccceeeceEEEEeCCeEEEECCCCCCCCceEEEEECCCC
Q 018336 256 ESYQLGTGEWKRAENAWKLSQCPRSNVGVGREGKLFCWAETEAAVQFGTCRVELGGCTLVTGSGYQGGPQEFYVVEGRNG 335 (358)
Q Consensus 256 ~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~d~~~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~~~~~~i~~yd~~~~ 335 (358)
..||..+.+-. ..+. ..|... ....++.-++++++.|+.+ ..|-++|+..+
T Consensus 294 ~iwd~~~~~~~--~~~~----~gH~~~-------------------V~~v~fSpdg~~laS~S~D----~tvrvw~ip~~ 344 (365)
T 4h5i_A 294 ALVKLKDLSMS--KIFK----QAHSFA-------------------ITEVTISPDSTYVASVSAA----NTIHIIKLPLN 344 (365)
T ss_dssp EEEETTTTEEE--EEET----TSSSSC-------------------EEEEEECTTSCEEEEEETT----SEEEEEECCTT
T ss_pred EEEECCCCcEE--EEec----CcccCC-------------------EEEEEECCCCCEEEEEeCC----CeEEEEEcCCC
Confidence 88999876532 1111 111111 1112344578888888765 68888887543
No 226
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=82.69 E-value=25 Score=31.09 Aligned_cols=146 Identities=11% Similarity=-0.054 Sum_probs=80.0
Q ss_pred ECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCC--CCCCCceeeeeEE--ECCEEEEEcCcCCCCCCCCeEEEEECC
Q 018336 136 SQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGK--NMPDNRSFFAAGE--LNGRVIIAGGHDENKTALSSAWAYDLI 211 (358)
Q Consensus 136 ~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~--~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~ 211 (358)
.++.||+.-.. ...++++|+....-+.+. .+..| .+.++ .++.||+.--. ....+++++..
T Consensus 169 ~~~~lY~~d~~-------~~~I~~~~~~g~~~~~l~~~~~~~P---~~iavdp~~g~ly~td~~-----~~~~I~~~~~d 233 (400)
T 3p5b_L 169 IHSNIYWTDSV-------LGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWG-----TPAKIKKGGLN 233 (400)
T ss_dssp TTTEEEEEETT-------TTEEEEECTTTCSEEEEEECSSCCE---EEEEEETTTTEEEEEECS-----SSCCEEEEETT
T ss_pred cCCceEEEECC-------CCeEEEEeCCCCceEEEEeCCCCCc---ceEEEecccCeEEEEeCC-----CCCEEEEEeCC
Confidence 37899998642 347889998876554442 22222 23333 36889987421 12468888886
Q ss_pred CCceEecCCCccCcCce-eEEEE--CCEEEEEeCcccCCCCceeeeeEEEECCCCceEEcCCccccCCCCCceeeeeecC
Q 018336 212 KDEWTELARMTQERDEC-EAVVI--GSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRAENAWKLSQCPRSNVGVGREG 288 (358)
Q Consensus 212 t~~W~~~~~~p~~~~~~-~~~~~--~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~d~ 288 (358)
...=+.+.. ...... ++++- +++||+.-.. ...|+++|++...-..+...+.. .
T Consensus 234 G~~~~~~~~--~~l~~P~glavd~~~~~lY~aD~~--------~~~I~~~d~dG~~~~~~~~~~~~--l----------- 290 (400)
T 3p5b_L 234 GVDIYSLVT--ENIQWPNGITLDLLSGRLYWVDSK--------LHSISSIDVNGGNRKTILEDEKR--L----------- 290 (400)
T ss_dssp SCSCEEEEC--SSCSCEEEEEEETTTTEEEEEETT--------TTEEEEEETTSCCCEEEEECSST--T-----------
T ss_pred CCccEEEEE--CCCCceEEEEEEeCCCEEEEEECC--------CCEEEEEeCCCCccEEEEeCCCC--C-----------
Confidence 543232211 111122 33333 6789998532 45788999875433332211000 0
Q ss_pred ccCceeccccceeeceEEEEeCCeEEEECCCCCCCCceEEEEECCCC
Q 018336 289 KLFCWAETEAAVQFGTCRVELGGCTLVTGSGYQGGPQEFYVVEGRNG 335 (358)
Q Consensus 289 ~~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~~~~~~i~~yd~~~~ 335 (358)
....+++..++.||+.--.. ..|+++|..++
T Consensus 291 ------------~~P~gl~v~~~~lywtd~~~----~~V~~~~~~~G 321 (400)
T 3p5b_L 291 ------------AHPFSLAVFEDKVFWTDIIN----EAIFSANRLTG 321 (400)
T ss_dssp ------------SSEEEEEEETTEEEEEESSS----CSEEEEESSSC
T ss_pred ------------CCCEEEEEeCCEEEEecCCC----CeEEEEEcCCC
Confidence 11234566888999886322 46777775544
No 227
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=82.15 E-value=26 Score=30.86 Aligned_cols=107 Identities=15% Similarity=0.053 Sum_probs=54.1
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEe-CCCCCCCceeeeeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCc
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTR-GKNMPDNRSFFAAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDE 214 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~-~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~ 214 (358)
++.+++.|+.+ ..+.+||..+.+-.. +...+....-.+++. -++..++.|+.+ ..+.+||..++.
T Consensus 181 ~~~~l~~~~~d-------~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d------g~i~iwd~~~~~ 247 (437)
T 3gre_A 181 EKSLLVALTNL-------SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR------GIIDIWDIRFNV 247 (437)
T ss_dssp SCEEEEEEETT-------SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT------SCEEEEETTTTE
T ss_pred CCCEEEEEeCC-------CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC------CeEEEEEcCCcc
Confidence 36666666643 479999998766432 211111111112222 256677777654 349999998865
Q ss_pred eEecCCCccCcCceeEEE-----ECCEEEEEeCcccCCCCceeeeeEEEECCCCc
Q 018336 215 WTELARMTQERDECEAVV-----IGSEFWVVSGYKTERQGIFDESAESYQLGTGE 264 (358)
Q Consensus 215 W~~~~~~p~~~~~~~~~~-----~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~ 264 (358)
....-..+....-..++. -++++++.|+. -..+..||..+++
T Consensus 248 ~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~--------dg~i~iwd~~~~~ 294 (437)
T 3gre_A 248 LIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSS--------KTFLTIWNFVKGH 294 (437)
T ss_dssp EEEEEBCTTCEEEEEEEECTTTCTTEEEEEEEST--------TEEEEEEETTTTE
T ss_pred EEEEEecCCCCceEEEEeccccCCCccEEEEEcC--------CCcEEEEEcCCCc
Confidence 432211111111111111 13446666654 2357889988765
No 228
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=81.26 E-value=41 Score=32.54 Aligned_cols=105 Identities=10% Similarity=0.208 Sum_probs=59.4
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEEECCEEEEEcCcCCCCCCCCeEEEEECCCCceE
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGELNGRVIIAGGHDENKTALSSAWAYDLIKDEWT 216 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~ 216 (358)
++.|++... +-+++||+.++++....... ...-......++.|++.- ...+.+||+.+++++
T Consensus 73 ~g~lWigT~---------~Gl~~yd~~~~~f~~~~~~~-~~~i~~i~~~~g~lWigt--------~~Gl~~~~~~~~~~~ 134 (758)
T 3ott_A 73 NTYLYMGTD---------NGILVYNYRADRYEQPETDF-PTDVRTMALQGDTLWLGA--------LNGLYTYQLQSRKLT 134 (758)
T ss_dssp TTEEEEEET---------TEEEEEETTTTEECCCSCCC-CSCEEEEEEETTEEEEEE--------TTEEEEEETTTCCEE
T ss_pred CCcEEEEeC---------CCeEEEeCCCCEEECcccCC-CceEEEEEecCCcEEEEc--------CCcceeEeCCCCeEE
Confidence 577887542 35899999998876521111 111112233477777752 125899999998888
Q ss_pred ecCCCcc--CcCceeEEEE--CCEEEEEeCcccCCCCceeeeeEEEECCCCceEEcC
Q 018336 217 ELARMTQ--ERDECEAVVI--GSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRAE 269 (358)
Q Consensus 217 ~~~~~p~--~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~ 269 (358)
.+...+. +......+.. +|.|++.. ...+.+||+.++++..+.
T Consensus 135 ~~~~~~~~l~~~~i~~i~~d~~g~lWigt----------~~Gl~~~~~~~~~~~~~~ 181 (758)
T 3ott_A 135 SFDTRRNGLPNNTIYSIIRTKDNQIYVGT----------YNGLCRYIPSNGKFEGIP 181 (758)
T ss_dssp EECHHHHCCSCSCEEEEEECTTCCEEEEE----------TTEEEEEETTTTEEEEEC
T ss_pred EeccCCCCcCCCeEEEEEEcCCCCEEEEe----------CCCHhhCccCCCceEEec
Confidence 7632111 1111112222 56787742 124678999888876543
No 229
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=81.21 E-value=34 Score=31.65 Aligned_cols=105 Identities=12% Similarity=0.136 Sum_probs=51.7
Q ss_pred cceeEEEECCCCcEEeCCCCCCCceeeeeEE-ECCE-EEEEcCcCCCCCCCCeEEEEECCCCceEec---CCCccCcCce
Q 018336 154 VSHVFVYDFTTRRWTRGKNMPDNRSFFAAGE-LNGR-VIIAGGHDENKTALSSAWAYDLIKDEWTEL---ARMTQERDEC 228 (358)
Q Consensus 154 ~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~-~~~~-iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~---~~~p~~~~~~ 228 (358)
...++++|..+.+-..+..++..+.-+..+. -+++ +|+.+.. .+.+.++|..+++-... ...|.+..+.
T Consensus 301 ~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~------~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~ 374 (543)
T 1nir_A 301 TGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANN------SNKVAVIDSKDRRLSALVDVGKTPHPGRGA 374 (543)
T ss_dssp TTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGG------GTEEEEEETTTTEEEEEEECSSSBCCTTCE
T ss_pred CCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecC------CCeEEEEECCCCeEEEeeccCCCCCCCCCc
Confidence 3579999987653211111122222222332 2444 5655322 24688899998865432 2233332222
Q ss_pred eEEEE-CCEEEEEeCcccCCCCceeeeeEEEECCCC-----ceEEcCCc
Q 018336 229 EAVVI-GSEFWVVSGYKTERQGIFDESAESYQLGTG-----EWKRAENA 271 (358)
Q Consensus 229 ~~~~~-~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~-----~W~~~~~~ 271 (358)
..+.- ++.+|+.+... ...|.+||..+. .|+.+..+
T Consensus 375 ~~~~p~~g~~~~s~~~~-------d~~V~v~d~~~~~~~~~~~~~v~~l 416 (543)
T 1nir_A 375 NFVHPKYGPVWSTSHLG-------DGSISLIGTDPKNHPQYAWKKVAEL 416 (543)
T ss_dssp EEEETTTEEEEEEEBSS-------SSEEEEEECCTTTCTTTBTSEEEEE
T ss_pred ccCCCCCccEEEeccCC-------CceEEEEEeCCCCCchhcCeEEEEE
Confidence 22111 36788776432 235667777662 26655544
No 230
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=80.95 E-value=28 Score=30.48 Aligned_cols=157 Identities=9% Similarity=0.053 Sum_probs=82.4
Q ss_pred eeEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCCcE--EeC----CCCCCCceeeeeE-E--ECCEEEEEcCcCCCCC
Q 018336 130 FCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRRW--TRG----KNMPDNRSFFAAG-E--LNGRVIIAGGHDENKT 200 (358)
Q Consensus 130 ~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W--~~~----~~~~~~~~~~~~~-~--~~~~iyv~GG~~~~~~ 200 (358)
..+++..++.+|++-| +.+|+++.....- ..+ +.+|.. .-++ . .++++|++-|
T Consensus 183 fDAv~~~~g~~~fFkg---------~~~Wr~~~~~~~~~p~~I~~~wpgLP~~---iDAa~~~~~~g~~~fFkg------ 244 (365)
T 3ba0_A 183 FDAVTTVGNKIFFFKD---------RFFWLKVSERPKTSVNLISSLWPTLPSG---IEAAYEIEARNQVFLFKD------ 244 (365)
T ss_dssp CSCEEEETTEEEEEET---------TEEEECCSSCCCCCEEEHHHHCSSCCSS---CCEEEEEGGGTEEEEEET------
T ss_pred eeeEEEcCCeEEEEeC---------CEEEEEcCCCccCCccchhhhccCCCCC---ccEEEEecCCCEEEEEeC------
Confidence 3456677999999976 2577776544221 111 233422 2222 2 2789999855
Q ss_pred CCCeEEEEECCCCc--e-EecCC--CccCcCce-eEEEE--CCEEEEEeCcccCCCCceeeeeEEEECCCCceEEcCCcc
Q 018336 201 ALSSAWAYDLIKDE--W-TELAR--MTQERDEC-EAVVI--GSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRAENAW 272 (358)
Q Consensus 201 ~~~~~~~yd~~t~~--W-~~~~~--~p~~~~~~-~~~~~--~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~~~p 272 (358)
...++|+..+.. + +.+.. +|...... +++.. ++++|++-|. ..++||..+.+-. ..-
T Consensus 245 --~~yWr~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG~----------~yw~yd~~~~~v~--~gy- 309 (365)
T 3ba0_A 245 --DKYWLISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVDN----------QYWRYDERRQMMD--PGY- 309 (365)
T ss_dssp --TEEEECSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEETT----------EEEEEETTTTEEC--SSC-
T ss_pred --CEEEEEcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEECC----------EEEEEeCCcceec--CCC-
Confidence 346666543211 1 12222 33321122 23333 5789999763 3578988765321 111
Q ss_pred ccCCCCCceeeeeecCccCceeccccceeeceEEEEeCCeEEEECCCCCCCCceEEEEECCCCceEee
Q 018336 273 KLSQCPRSNVGVGREGKLFCWAETEAAVQFGTCRVELGGCTLVTGSGYQGGPQEFYVVEGRNGKFRKF 340 (358)
Q Consensus 273 ~~~~~~~~~~~~~~d~~~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~~~~~~i~~yd~~~~~W~~~ 340 (358)
++.- ...|..+|. +..+++...++++|++-| +..|+||..+++-...
T Consensus 310 -----Pk~I--------~~~f~g~p~--~iDaA~~~~~g~~YfFkg------~~ywr~d~~~~~v~~~ 356 (365)
T 3ba0_A 310 -----PKLI--------TKNFQGIGP--KIDAVFYSKNKYYYFFQG------SNQFEYDFLLQRITKT 356 (365)
T ss_dssp -----CCCH--------HHHSTTCCS--SCSEEEEETTTEEEEEET------TEEEEEETTTTEEEEE
T ss_pred -----Ccch--------hhcCCCCCC--ccceeeEecCCcEEEEeC------CEEEEEECCccEEecc
Confidence 1110 012333332 222333333889999988 4899999988775543
No 231
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=80.91 E-value=5 Score=32.64 Aligned_cols=21 Identities=5% Similarity=-0.107 Sum_probs=17.9
Q ss_pred eCCeEEEECCCCCCCCceEEEEECCCC
Q 018336 309 LGGCTLVTGSGYQGGPQEFYVVEGRNG 335 (358)
Q Consensus 309 ~~~~i~v~gG~~~~~~~~i~~yd~~~~ 335 (358)
.++++|++-| +.-|+||..++
T Consensus 182 ~~g~~YfFkg------~~Ywr~d~~~~ 202 (227)
T 3lp9_A 182 KTNEVYFFKD------DHYARVKVTPX 202 (227)
T ss_dssp STTEEEEEET------TEEEEEECCSS
T ss_pred CCceEEEEEC------CEEEEEECCcc
Confidence 5689999988 48999998876
No 232
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=80.88 E-value=20 Score=34.51 Aligned_cols=138 Identities=12% Similarity=-0.024 Sum_probs=72.6
Q ss_pred ceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEE--ECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCcee
Q 018336 102 YGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVAS--SQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSF 179 (358)
Q Consensus 102 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~--~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~ 179 (358)
..+.++|+....-..+....... +. .+++ .++.||+..-. ....++++++....-+.+.... ...
T Consensus 475 ~~I~v~d~dg~~~~~l~~~~~~~---P~--giavDp~~g~ly~td~~------~~~~I~~~~~dG~~~~~l~~~~--l~~ 541 (699)
T 1n7d_A 475 GTVSVADTKGVKRKTLFREQGSK---PR--AIVVDPVHGFMYWTDWG------TPAKIKKGGLNGVDIYSLVTEN--IQW 541 (699)
T ss_dssp SCEEEEBSSSCCEEEECCCSSCC---CC--CEECCSSSSCCEECCCS------SSCCEEBCCSSSCCCCEESCSS--CSS
T ss_pred CeEEEEecCCCceEEEEeCCCCC---cc--eEEEccCCCcEEEcccC------CCCeEEEEeCCCCCeeEEEeCC--CCC
Confidence 35677777765544442211110 11 2333 36788876421 1246788777543333222111 111
Q ss_pred e-eeEE--ECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCc-cCcCceeEEEECCEEEEEeCcccCCCCceeeee
Q 018336 180 F-AAGE--LNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMT-QERDECEAVVIGSEFWVVSGYKTERQGIFDESA 255 (358)
Q Consensus 180 ~-~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p-~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~~~i 255 (358)
. ++++ .++.||++-. ....|+++++....-+.+.... ......++++..+.||+.... ...|
T Consensus 542 PnGlavd~~~~~LY~aD~------~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~--------~~~V 607 (699)
T 1n7d_A 542 PNGITLDLLSGRLYWVDS------KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDII--------NEAI 607 (699)
T ss_dssp CCCEEECTTTCCEEEEET------TTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECST--------TTCE
T ss_pred ccEEEEeccCCEEEEEec------CCCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCC--------CCeE
Confidence 2 2333 2578999842 2357999998654434333221 112234566778899999732 3467
Q ss_pred EEEECCCCceE
Q 018336 256 ESYQLGTGEWK 266 (358)
Q Consensus 256 ~~yd~~~~~W~ 266 (358)
.++|+.+++-.
T Consensus 608 ~~~d~~~G~~~ 618 (699)
T 1n7d_A 608 FSANRLTGSDV 618 (699)
T ss_dssp EEEETTTEEEE
T ss_pred EEEEccCCCce
Confidence 88998776543
No 233
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=80.81 E-value=27 Score=30.25 Aligned_cols=143 Identities=13% Similarity=0.132 Sum_probs=71.1
Q ss_pred ceeEEEECCCCcEEeCC--CCCCCceee--eeEE--ECCEEEEEcCcCCCCCCCCeEEEEECCCC--ceEecCCCccCcC
Q 018336 155 SHVFVYDFTTRRWTRGK--NMPDNRSFF--AAGE--LNGRVIIAGGHDENKTALSSAWAYDLIKD--EWTELARMTQERD 226 (358)
Q Consensus 155 ~~~~~yd~~t~~W~~~~--~~~~~~~~~--~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~t~--~W~~~~~~p~~~~ 226 (358)
..+.+||..+.+-...- ..+...... +.+. .++.+++.|+.+. .+.+||+... .-..+......
T Consensus 180 ~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~------~v~~wd~~~~~~~~~~~~~h~~~-- 251 (380)
T 3iz6_a 180 QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDT------TVRLWDLRITSRAVRTYHGHEGD-- 251 (380)
T ss_dssp SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTS------CEEEEETTTTCCCCEEECCCSSC--
T ss_pred CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCC------eEEEEECCCCCcceEEECCcCCC--
Confidence 36888898887654321 222222111 1122 2567788877653 4888998632 12222111111
Q ss_pred ceeEE-EECCEEEEEeCcccCCCCceeeeeEEEECCCCceEEc-CCccccCCCCCceeeeeecCccCceeccccceeece
Q 018336 227 ECEAV-VIGSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRA-ENAWKLSQCPRSNVGVGREGKLFCWAETEAAVQFGT 304 (358)
Q Consensus 227 ~~~~~-~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~-~~~p~~~~~~~~~~~~~~d~~~~~W~~lp~~~r~~~ 304 (358)
-..++ .-+++.++.|+.+ ..+..||..++.-... ...+......... ...
T Consensus 252 v~~v~~~p~~~~l~s~s~D--------~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~--------------------v~~ 303 (380)
T 3iz6_a 252 INSVKFFPDGQRFGTGSDD--------GTCRLFDMRTGHQLQVYNREPDRNDNELPI--------------------VTS 303 (380)
T ss_dssp CCEEEECTTSSEEEEECSS--------SCEEEEETTTTEEEEEECCCCSSSCCSSCS--------------------CSE
T ss_pred eEEEEEecCCCeEEEEcCC--------CeEEEEECCCCcEEEEecccccccccccCc--------------------eEE
Confidence 11122 2266777777653 3567899987653322 1111000000000 111
Q ss_pred EEEEeCCeEEEECCCCCCCCceEEEEECCCCce
Q 018336 305 CRVELGGCTLVTGSGYQGGPQEFYVVEGRNGKF 337 (358)
Q Consensus 305 ~~~~~~~~i~v~gG~~~~~~~~i~~yd~~~~~W 337 (358)
.++..++++++.|+.+ ..|.+||..+.+-
T Consensus 304 ~~~s~~g~~l~~g~~d----g~i~vwd~~~~~~ 332 (380)
T 3iz6_a 304 VAFSISGRLLFAGYSN----GDCYVWDTLLAEM 332 (380)
T ss_dssp EEECSSSSEEEEECTT----SCEEEEETTTCCE
T ss_pred EEECCCCCEEEEEECC----CCEEEEECCCCce
Confidence 2344567777777654 5788999876653
No 234
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=80.79 E-value=17 Score=37.45 Aligned_cols=104 Identities=11% Similarity=0.082 Sum_probs=54.2
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEe-CCCCCCCceeeeeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCc
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTR-GKNMPDNRSFFAAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDE 214 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~-~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~ 214 (358)
++.+++.|+.+ ..+.+||..+.+-.. +..-. ..-.+++. -++..++.|+.+ ..+.+||..+++
T Consensus 626 ~~~~l~s~~~d-------~~i~vw~~~~~~~~~~~~~h~--~~v~~~~~s~~~~~l~s~~~d------~~v~vwd~~~~~ 690 (1249)
T 3sfz_A 626 DGQRIASCGAD-------KTLQVFKAETGEKLLDIKAHE--DEVLCCAFSSDDSYIATCSAD------KKVKIWDSATGK 690 (1249)
T ss_dssp TSSEEEEEETT-------SCEEEEETTTCCEEEEECCCS--SCEEEEEECTTSSEEEEEETT------SEEEEEETTTCC
T ss_pred CCCEEEEEeCC-------CeEEEEECCCCCEEEEeccCC--CCEEEEEEecCCCEEEEEeCC------CeEEEEECCCCc
Confidence 56666666643 368999998876432 22111 11112222 256666666543 359999998875
Q ss_pred eEecCCCccCcCceeEEEE----CCEEEEEeCcccCCCCceeeeeEEEECCCCce
Q 018336 215 WTELARMTQERDECEAVVI----GSEFWVVSGYKTERQGIFDESAESYQLGTGEW 265 (358)
Q Consensus 215 W~~~~~~p~~~~~~~~~~~----~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W 265 (358)
-... +.........+.+ ++.+++.|+.+ ..+..||..+++-
T Consensus 691 ~~~~--~~~~~~~v~~~~~~~~~~~~~l~sg~~d--------~~v~vwd~~~~~~ 735 (1249)
T 3sfz_A 691 LVHT--YDEHSEQVNCCHFTNKSNHLLLATGSND--------FFLKLWDLNQKEC 735 (1249)
T ss_dssp EEEE--EECCSSCEEEEEECSSSSCCEEEEEETT--------SCEEEEETTSSSE
T ss_pred eEEE--EcCCCCcEEEEEEecCCCceEEEEEeCC--------CeEEEEECCCcch
Confidence 4322 1111122222333 23355555432 3578899887753
No 235
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=80.72 E-value=45 Score=32.68 Aligned_cols=133 Identities=12% Similarity=-0.044 Sum_probs=72.0
Q ss_pred eEEEEeCCCCCeeecC--CCCCCCCCCCceeEEEE--ECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCce
Q 018336 103 GVTVFDPVSLTWDRLG--PVPEYPAGLPLFCQVAS--SQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRS 178 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~--~~~~~~~~~~~~~~~~~--~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~ 178 (358)
.+.++++....-..+. .+.. -.++++ .++.||+.--. ....++++++....-+.+..-... .
T Consensus 494 ~I~v~~ldG~~~~~l~~~~l~~-------P~gIaVDp~~g~LYwtD~g------~~~~I~~~~~dG~~~~~lv~~~l~-~ 559 (791)
T 3m0c_C 494 TVSVADTKGVKRKTLFRENGSK-------PRAIVVDPVHGFMYWTDWG------TPAKIKKGGLNGVDIYSLVTENIQ-W 559 (791)
T ss_dssp EEEEEETTSSSEEEEEECTTCC-------EEEEEEETTTTEEEEEECS------SSCEEEEEETTSCCEEEEECSSCS-C
T ss_pred eEEEEeCCCCeEEEEEeCCCCC-------cceEEEecCCCCEEEecCC------CCCeEEEEecCCCceEEEEeCCCC-C
Confidence 5566666654444332 1222 124444 36899998521 124789998876554444221111 1
Q ss_pred eeeeEE--ECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCC-ccCcCceeEEEECCEEEEEeCcccCCCCceeeee
Q 018336 179 FFAAGE--LNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARM-TQERDECEAVVIGSEFWVVSGYKTERQGIFDESA 255 (358)
Q Consensus 179 ~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~-p~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~~~i 255 (358)
-.++++ .++.||++-. ....|+++++....=+.+... .......++++.+++||+.-.. ...|
T Consensus 560 P~GLavD~~~~~LYwaD~------~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~--------~~~I 625 (791)
T 3m0c_C 560 PNGITLDLLSGRLYWVDS------KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDII--------NEAI 625 (791)
T ss_dssp EEEEEEETTTTEEEEEET------TTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETT--------TTEE
T ss_pred ceEEEEecCCCeEEEEeC------CCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEECC--------CCEE
Confidence 123333 3689999832 236799999965433333211 1112234566789999999743 3466
Q ss_pred EEEECCCC
Q 018336 256 ESYQLGTG 263 (358)
Q Consensus 256 ~~yd~~~~ 263 (358)
+++|..++
T Consensus 626 ~~~dk~tG 633 (791)
T 3m0c_C 626 FSANRLTG 633 (791)
T ss_dssp EEEETTTC
T ss_pred EEEeCCCC
Confidence 77776554
No 236
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=80.58 E-value=19 Score=28.32 Aligned_cols=99 Identities=12% Similarity=0.167 Sum_probs=55.9
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcE-EeCCC--CCCCceeeeeEE--ECCEEEEEcCcCCCCCCCCeEEEEECC
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRW-TRGKN--MPDNRSFFAAGE--LNGRVIIAGGHDENKTALSSAWAYDLI 211 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W-~~~~~--~~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~ 211 (358)
++++|++-| +.+|+|+..+-.- +.+.. +|.......+|. .++++|++-| +..+.||..
T Consensus 64 ~~~~yfFkG---------~~yw~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg--------~~ywr~d~~ 126 (195)
T 1itv_A 64 SKKLFFFSG---------RQVWVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSG--------RRLWRFDVK 126 (195)
T ss_dssp TCCEEEEET---------TEEEEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEET--------TEEEEEETT
T ss_pred CCeEEEEeC---------CEEEEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeC--------CEEEEEeCC
Confidence 678999977 3688888643111 11222 222111222333 3689999955 458899987
Q ss_pred CCceEe-----c----CCCccCcCceeEEEECCEEEEEeCcccCCCCceeeeeEEEECCCCc
Q 018336 212 KDEWTE-----L----ARMTQERDECEAVVIGSEFWVVSGYKTERQGIFDESAESYQLGTGE 264 (358)
Q Consensus 212 t~~W~~-----~----~~~p~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~ 264 (358)
+++-.. + +.+|. .-.++...+|.+|++-|. ..+.||..+..
T Consensus 127 ~~~~~~gyPr~i~~~w~Gvp~--~idaa~~~~g~~Yffkg~----------~y~~~~~~~~~ 176 (195)
T 1itv_A 127 AQMVDPRSASEVDRMFPGVPL--DTHDVFQFREKAYFCQDR----------FYWRVSSRSEL 176 (195)
T ss_dssp TTEECGGGCEEHHHHSTTSCS--SCSEEEEETTEEEEEETT----------EEEEEECCTTC
T ss_pred cccccCCCccChhhcCCCCCC--CCCEEEEeCCeEEEEeCC----------EEEEEECCccE
Confidence 754221 1 12222 123455678999999764 34678877664
No 237
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=80.26 E-value=25 Score=29.47 Aligned_cols=90 Identities=16% Similarity=0.181 Sum_probs=46.0
Q ss_pred eEEEEeC-CCCCeeecCC--CCCCCCCCCceeEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCCc-------EEeCCC
Q 018336 103 GVTVFDP-VSLTWDRLGP--VPEYPAGLPLFCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRR-------WTRGKN 172 (358)
Q Consensus 103 ~~~~~d~-~~~~W~~~~~--~~~~~~~~~~~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~-------W~~~~~ 172 (358)
.+..||. .+.+-..+.. ... ... +++...+.+++.|+.+ ..+.+||..+.. .+.+..
T Consensus 80 ~i~~wd~~~~~~~~~~~~~~~~~-----~v~-~l~~~~~~~l~s~~~d-------~~i~iwd~~~~~~~~~~~~~~~~~~ 146 (342)
T 1yfq_A 80 EILKVDLIGSPSFQALTNNEANL-----GIC-RICKYGDDKLIAASWD-------GLIEVIDPRNYGDGVIAVKNLNSNN 146 (342)
T ss_dssp CEEEECSSSSSSEEECBSCCCCS-----CEE-EEEEETTTEEEEEETT-------SEEEEECHHHHTTBCEEEEESCSSS
T ss_pred eEEEEEeccCCceEeccccCCCC-----ceE-EEEeCCCCEEEEEcCC-------CeEEEEcccccccccccccCCeeeE
Confidence 6888998 8777655543 221 111 2332325555555532 368888876400 222323
Q ss_pred CCCCceeeeeEEECCEEEEEcCcCCCCCCCCeEEEEECCC
Q 018336 173 MPDNRSFFAAGELNGRVIIAGGHDENKTALSSAWAYDLIK 212 (358)
Q Consensus 173 ~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t 212 (358)
+.....-.+++...+. +++|+.+ ..+.+||..+
T Consensus 147 ~~~~~~v~~~~~~~~~-l~~~~~d------~~i~i~d~~~ 179 (342)
T 1yfq_A 147 TKVKNKIFTMDTNSSR-LIVGMNN------SQVQWFRLPL 179 (342)
T ss_dssp SSSCCCEEEEEECSSE-EEEEEST------TEEEEEESSC
T ss_pred EeeCCceEEEEecCCc-EEEEeCC------CeEEEEECCc
Confidence 3322222333334455 4454332 4699999987
No 238
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=80.20 E-value=25 Score=29.42 Aligned_cols=85 Identities=12% Similarity=0.183 Sum_probs=43.6
Q ss_pred ECCEEEEEcCcCCCCCCCcceeEEEECC-CCcEEeCCCCCCCceeeeeEEE-CCEEEEEcCcCCCCCCCCeEEEEECCC-
Q 018336 136 SQGKLVVMGGWDPASYSPVSHVFVYDFT-TRRWTRGKNMPDNRSFFAAGEL-NGRVIIAGGHDENKTALSSAWAYDLIK- 212 (358)
Q Consensus 136 ~~~~lyv~Gg~~~~~~~~~~~~~~yd~~-t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t- 212 (358)
.++.||+... ...+++||+. ...|+.....+ . ..+.+.. ++.+|+.. . ...++.||+..
T Consensus 106 ~~~~l~v~t~--------~~~l~~~d~~g~~~~~~~~~~~--~-~~~~~~~~~g~l~vgt-~------~~~l~~~d~~g~ 167 (330)
T 3hxj_A 106 FEDILYVTSM--------DGHLYAINTDGTEKWRFKTKKA--I-YATPIVSEDGTIYVGS-N------DNYLYAINPDGT 167 (330)
T ss_dssp ETTEEEEECT--------TSEEEEECTTSCEEEEEECSSC--C-CSCCEECTTSCEEEEC-T------TSEEEEECTTSC
T ss_pred ECCEEEEEec--------CCEEEEEcCCCCEEEEEcCCCc--e-eeeeEEcCCCEEEEEc-C------CCEEEEECCCCC
Confidence 3888887542 2368899987 33465432211 1 1122333 56777642 1 14689999872
Q ss_pred CceEecCCCccCcCceeEEE-ECCEEEEEe
Q 018336 213 DEWTELARMTQERDECEAVV-IGSEFWVVS 241 (358)
Q Consensus 213 ~~W~~~~~~p~~~~~~~~~~-~~~~lyv~g 241 (358)
..|+.-.. .... ...+. -++.||+..
T Consensus 168 ~~~~~~~~--~~~~-~~~~~d~~g~l~v~t 194 (330)
T 3hxj_A 168 EKWRFKTN--DAIT-SAASIGKDGTIYFGS 194 (330)
T ss_dssp EEEEEECS--SCCC-SCCEECTTCCEEEES
T ss_pred EeEEEecC--CCce-eeeEEcCCCEEEEEe
Confidence 23654322 1111 12233 366777654
No 239
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=80.09 E-value=37 Score=31.39 Aligned_cols=139 Identities=16% Similarity=0.145 Sum_probs=74.4
Q ss_pred ceeEEEEC--CCCcEEeCCCCCCCceeeeeEEEC-CEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEE
Q 018336 155 SHVFVYDF--TTRRWTRGKNMPDNRSFFAAGELN-GRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAV 231 (358)
Q Consensus 155 ~~~~~yd~--~t~~W~~~~~~~~~~~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~ 231 (358)
..+|..+. ....- .+...+..+ ......+ +.++++.+... .+.+||..++.-+.+...+. .....
T Consensus 90 ~~l~~~~~~~~g~~~-~l~~~~~~~--~~~~s~dg~~~~~~s~~~~------~~~l~d~~~g~~~~l~~~~~---~~~~~ 157 (582)
T 3o4h_A 90 HALFKVNTSRPGEEQ-RLEAVKPMR--ILSGVDTGEAVVFTGATED------RVALYALDGGGLRELARLPG---FGFVS 157 (582)
T ss_dssp EEEEEEETTSTTCCE-ECTTSCSBE--EEEEEECSSCEEEEEECSS------CEEEEEEETTEEEEEEEESS---CEEEE
T ss_pred eEEEEEeccCCCccc-cccCCCCce--eeeeCCCCCeEEEEecCCC------CceEEEccCCcEEEeecCCC---ceEEE
Confidence 46788887 43332 343333222 2222333 44555543322 24488998887776654333 22334
Q ss_pred EECCEEEEEeCcccCCCCceeeeeEEEECCCCceEEcCCccccCCCCCceeeeeecCccCceeccccceeeceEEEEeCC
Q 018336 232 VIGSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRAENAWKLSQCPRSNVGVGREGKLFCWAETEAAVQFGTCRVELGG 311 (358)
Q Consensus 232 ~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~d~~~~~W~~lp~~~r~~~~~~~~~~ 311 (358)
.-||+..++++..... ...++.+|+.++++..+..-... ...-...-+|
T Consensus 158 spDG~~la~~~~~~~~----~~~i~~~d~~~g~~~~l~~~~~~---------------------------~~~~~~SpDG 206 (582)
T 3o4h_A 158 DIRGDLIAGLGFFGGG----RVSLFTSNLSSGGLRVFDSGEGS---------------------------FSSASISPGM 206 (582)
T ss_dssp EEETTEEEEEEEEETT----EEEEEEEETTTCCCEEECCSSCE---------------------------EEEEEECTTS
T ss_pred CCCCCEEEEEEEcCCC----CeEEEEEcCCCCCceEeecCCCc---------------------------cccceECCCC
Confidence 5577766655543222 34689999999988876533110 0011233456
Q ss_pred eEEEECCCCCCCCceEEEEECCCCceE
Q 018336 312 CTLVTGSGYQGGPQEFYVVEGRNGKFR 338 (358)
Q Consensus 312 ~i~v~gG~~~~~~~~i~~yd~~~~~W~ 338 (358)
+.++.+.. ++...|+++|.++++.+
T Consensus 207 ~~l~~~~~--~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 207 KVTAGLET--AREARLVTVDPRDGSVE 231 (582)
T ss_dssp CEEEEEEC--SSCEEEEEECTTTCCEE
T ss_pred CEEEEccC--CCeeEEEEEcCCCCcEE
Confidence 65553322 21258999999988877
No 240
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=79.88 E-value=27 Score=29.60 Aligned_cols=123 Identities=14% Similarity=0.116 Sum_probs=68.2
Q ss_pred EEEEE--CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCC-------CCCcee-eeeEEE-C-CEEEEEcCcCCCC
Q 018336 132 QVASS--QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNM-------PDNRSF-FAAGEL-N-GRVIIAGGHDENK 199 (358)
Q Consensus 132 ~~~~~--~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~-------~~~~~~-~~~~~~-~-~~iyv~GG~~~~~ 199 (358)
.++.. ++.||+..+.. ...+.+||+....-..+... +..... .+++.- + +.+|+....
T Consensus 147 ~ia~~~~~g~lyv~d~~~------~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~---- 216 (329)
T 3fvz_A 147 DVAVEPSTGAVFVSDGYC------NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE---- 216 (329)
T ss_dssp EEEECTTTCCEEEEECSS------CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT----
T ss_pred EEEEeCCCCeEEEEeCCC------CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC----
Confidence 44444 68899997521 34789999654433333211 111122 233332 4 899998532
Q ss_pred CCCCeEEEEECCCCceEecCCCc-cCcCceeEEEECCEEEEEeCcccCCCCceeeeeEEEECCCCceEE
Q 018336 200 TALSSAWAYDLIKDEWTELARMT-QERDECEAVVIGSEFWVVSGYKTERQGIFDESAESYQLGTGEWKR 267 (358)
Q Consensus 200 ~~~~~~~~yd~~t~~W~~~~~~p-~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~ 267 (358)
...+.+||+.+++....-..+ .......++...+.+|+..|...... .....+.+||..+++...
T Consensus 217 --~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~-~~~~~v~~~~~~~g~~~~ 282 (329)
T 3fvz_A 217 --NGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGD-QEPVQGFVMNFSSGEIID 282 (329)
T ss_dssp --TTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTC-SCCCCEEEEETTTCCEEE
T ss_pred --CCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEecc-CCCcEEEEEEcCCCeEEE
Confidence 257999999977665432211 11122233444577777777543221 124478899988876544
No 241
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=79.74 E-value=27 Score=29.60 Aligned_cols=66 Identities=12% Similarity=-0.010 Sum_probs=41.6
Q ss_pred CCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeE-EEECCEEEEEeCcccCCCCceeeeeEEEECCCCc
Q 018336 186 NGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEA-VVIGSEFWVVSGYKTERQGIFDESAESYQLGTGE 264 (358)
Q Consensus 186 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~-~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~ 264 (358)
++.+|+++... ..++.||+.++..+.+. .+. ....+ ..-+|++|+... ..++.||+.+++
T Consensus 60 ~~~l~~~d~~~------~~i~~~d~~~~~~~~~~-~~~--~v~~i~~~~dg~l~v~~~----------~gl~~~d~~~g~ 120 (326)
T 2ghs_A 60 SGTAWWFNILE------RELHELHLASGRKTVHA-LPF--MGSALAKISDSKQLIASD----------DGLFLRDTATGV 120 (326)
T ss_dssp TTEEEEEEGGG------TEEEEEETTTTEEEEEE-CSS--CEEEEEEEETTEEEEEET----------TEEEEEETTTCC
T ss_pred CCEEEEEECCC------CEEEEEECCCCcEEEEE-CCC--cceEEEEeCCCeEEEEEC----------CCEEEEECCCCc
Confidence 36788885432 46899999887665443 221 11222 245788887641 247899999998
Q ss_pred eEEcCC
Q 018336 265 WKRAEN 270 (358)
Q Consensus 265 W~~~~~ 270 (358)
...+..
T Consensus 121 ~~~~~~ 126 (326)
T 2ghs_A 121 LTLHAE 126 (326)
T ss_dssp EEEEEC
T ss_pred EEEEee
Confidence 876654
No 242
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=79.27 E-value=31 Score=29.91 Aligned_cols=96 Identities=10% Similarity=0.114 Sum_probs=47.2
Q ss_pred ceeEEEECCCCcEE-eCCCCCCCceeeeeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCC--ceEecCCCccCcCceeE
Q 018336 155 SHVFVYDFTTRRWT-RGKNMPDNRSFFAAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKD--EWTELARMTQERDECEA 230 (358)
Q Consensus 155 ~~~~~yd~~t~~W~-~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~--~W~~~~~~p~~~~~~~~ 230 (358)
..+.+||..+..-. .+..+.....-.+++. -++.+++.|+.+ ..+.+||..+. ..+.+..+.........
T Consensus 45 ~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d------g~v~vw~~~~~~~~~~~~~~~~~h~~~v~~ 118 (416)
T 2pm9_A 45 SSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDN------GSLELYSTNEANNAINSMARFSNHSSSVKT 118 (416)
T ss_dssp CCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESS------SCEEEECCSSTTSCCCEEEECCCSSSCCCE
T ss_pred CeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccC------CeEEEeecccccccccchhhccCCccceEE
Confidence 46889998876432 2222222211122222 255666666543 35888988761 11122222211111222
Q ss_pred EEE---CCEEEEEeCcccCCCCceeeeeEEEECCCCc
Q 018336 231 VVI---GSEFWVVSGYKTERQGIFDESAESYQLGTGE 264 (358)
Q Consensus 231 ~~~---~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~ 264 (358)
+.+ ++++++.|+.+ ..+..||..+.+
T Consensus 119 ~~~~~~~~~~l~s~~~d--------g~v~iwd~~~~~ 147 (416)
T 2pm9_A 119 VKFNAKQDNVLASGGNN--------GEIFIWDMNKCT 147 (416)
T ss_dssp EEECSSSTTBEEEECSS--------SCEEBCBTTTTS
T ss_pred EEEcCCCCCEEEEEcCC--------CeEEEEECCCCc
Confidence 222 26677777653 356788888764
No 243
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=79.23 E-value=23 Score=28.54 Aligned_cols=104 Identities=9% Similarity=0.056 Sum_probs=58.2
Q ss_pred EEEE-ECCEEEEEcCcCCCCCCCcceeEEEECCCC----cEEe--------CCCCCCC--ceeeeeEE---ECCEEEEEc
Q 018336 132 QVAS-SQGKLVVMGGWDPASYSPVSHVFVYDFTTR----RWTR--------GKNMPDN--RSFFAAGE---LNGRVIIAG 193 (358)
Q Consensus 132 ~~~~-~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~----~W~~--------~~~~~~~--~~~~~~~~---~~~~iyv~G 193 (358)
++.. .++.+|++-| +.+|+||..++ .... .+.+|.. ...-.+|. .++++|++-
T Consensus 64 Aa~~~~~g~~~fFkg---------~~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA~~~~~~gk~yfFk 134 (225)
T 3oyo_A 64 CSFHTEASEAYVFSG---------NHSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYLFK 134 (225)
T ss_dssp EEEECSTTEEEEEET---------TEEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEEEECSSTTEEEEEE
T ss_pred EEEEcCCCeEEEEcC---------CEEEEEecccccCCCceecCchhhhhcCCCCCCcccccccceEEEECCCCcEEEEe
Confidence 3443 5899999977 36899976432 2211 1223321 01222333 268999996
Q ss_pred CcCCCCCCCCeEEEEECCCCceEe----cC-CCccC-----cCceeEE-E--ECCEEEEEeCcccCCCCceeeeeEEEEC
Q 018336 194 GHDENKTALSSAWAYDLIKDEWTE----LA-RMTQE-----RDECEAV-V--IGSEFWVVSGYKTERQGIFDESAESYQL 260 (358)
Q Consensus 194 G~~~~~~~~~~~~~yd~~t~~W~~----~~-~~p~~-----~~~~~~~-~--~~~~lyv~gG~~~~~~~~~~~~i~~yd~ 260 (358)
| +..++||..+++... +. ..|.. .....++ . .++++|++-|. ..++||.
T Consensus 135 G--------~~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG~----------~ywr~d~ 196 (225)
T 3oyo_A 135 G--------NKYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKGQ----------NYVRIDF 196 (225)
T ss_dssp T--------TEEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEETT----------EEEEEEC
T ss_pred C--------CeEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEECC----------EEEEEeC
Confidence 5 458889877665543 11 12321 1222333 3 37899999764 3478888
Q ss_pred CC
Q 018336 261 GT 262 (358)
Q Consensus 261 ~~ 262 (358)
.+
T Consensus 197 ~~ 198 (225)
T 3oyo_A 197 TP 198 (225)
T ss_dssp CT
T ss_pred Cc
Confidence 73
No 244
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=78.95 E-value=31 Score=29.77 Aligned_cols=134 Identities=5% Similarity=-0.064 Sum_probs=75.8
Q ss_pred eEEEEeCCCCCeeecCCCCCCCCCCCceeEEEE--ECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCC--CCCCce
Q 018336 103 GVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVAS--SQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKN--MPDNRS 178 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~--~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~--~~~~~~ 178 (358)
.+..+++.......+..-.. ...+++. .++.||+..-. ...++++++.....+.+.. +..|
T Consensus 54 ~I~~i~~~g~~~~~~~~~~~------~~~~l~~d~~~~~ly~~D~~-------~~~I~r~~~~g~~~~~~~~~~~~~p-- 118 (349)
T 3v64_C 54 DIRQVLPHRSEYTLLLNNLE------NAIALDFHHRRELVFWSDVT-------LDRILRANLNGSNVEEVVSTGLESP-- 118 (349)
T ss_dssp CEEEECTTSCCEEEEECSCS------CEEEEEEETTTTEEEEEETT-------TTEEEEEETTSCSCEEEECSSCSCC--
T ss_pred ceEEEeCCCCeeEEeecCCC------ceEEEEEeccccEEEEEecc-------CCceEEEecCCCCceEEEeCCCCCc--
Confidence 57778888776655432211 1123433 36889988542 3579999998766544322 2222
Q ss_pred eeeeEE--ECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecC--CCccCcCceeEEEE--CCEEEEEeCcccCCCCcee
Q 018336 179 FFAAGE--LNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELA--RMTQERDECEAVVI--GSEFWVVSGYKTERQGIFD 252 (358)
Q Consensus 179 ~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~--~~p~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~ 252 (358)
.+.++ .++.||+.-.. ...++++++....-+.+. .+..+ ..+++- ++.||+..-.. .
T Consensus 119 -~glavd~~~g~ly~~d~~------~~~I~~~~~dG~~~~~l~~~~l~~P---~~iavdp~~g~ly~td~~~-------~ 181 (349)
T 3v64_C 119 -GGLAVDWVHDKLYWTDSG------TSRIEVANLDGAHRKVLLWQSLEKP---RAIALHPMEGTIYWTDWGN-------T 181 (349)
T ss_dssp -CEEEEETTTTEEEEEETT------TTEEEEEETTSCSCEEEECTTCSCE---EEEEEETTTTEEEEEECSS-------S
T ss_pred -cEEEEecCCCeEEEEcCC------CCeEEEEcCCCCceEEEEeCCCCCc---ceEEEecCcCeEEEeccCC-------C
Confidence 23333 37899998432 357899998765433332 22222 223333 67899886321 2
Q ss_pred eeeEEEECCCCceEEc
Q 018336 253 ESAESYQLGTGEWKRA 268 (358)
Q Consensus 253 ~~i~~yd~~~~~W~~~ 268 (358)
..|+++++....-+.+
T Consensus 182 ~~I~r~~~dG~~~~~~ 197 (349)
T 3v64_C 182 PRIEASSMDGSGRRII 197 (349)
T ss_dssp CEEEEEETTSCSCEES
T ss_pred CEEEEEeCCCCCcEEE
Confidence 5788998876543333
No 245
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=78.54 E-value=20 Score=32.16 Aligned_cols=108 Identities=14% Similarity=0.093 Sum_probs=59.3
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEEEC-CEEEEEcCcCCCCCCCCeEEEEECCCCce
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGELN-GRVIIAGGHDENKTALSSAWAYDLIKDEW 215 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~~yd~~t~~W 215 (358)
++.||+.-.. ..+.++|+.+++...+.. ...+..+.+...+ +.||+....... ....+..++.. +.|
T Consensus 149 ~g~Lyv~d~~--------~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~--~~~~v~~~~~~-g~~ 216 (430)
T 3tc9_A 149 HNHLYLVGEQ--------HPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNN--DRPNNYILTRE-SGF 216 (430)
T ss_dssp EEEEEEEEBT--------EEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCT--TSEEEEEEEGG-GTS
T ss_pred CCeEEEEeCC--------CcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCc--ccceEEEEeCC-Cce
Confidence 5789988541 579999999988776643 1222222222223 459998643321 12345666653 334
Q ss_pred E---ecCCCccCcCceeEEEE--CCEEEEEeCcccCCCCceeeeeEEEECCCCceEE
Q 018336 216 T---ELARMTQERDECEAVVI--GSEFWVVSGYKTERQGIFDESAESYQLGTGEWKR 267 (358)
Q Consensus 216 ~---~~~~~p~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~ 267 (358)
. .+..+..+ +.+++. ++.||+..-. ...|++||+.+..-..
T Consensus 217 ~~~~~l~~~~~p---~giavdp~~g~lyv~d~~--------~~~V~~~~~~~~~~~~ 262 (430)
T 3tc9_A 217 KVITELTKGQNC---NGAETHPINGELYFNSWN--------AGQVFRYDFTTQETTP 262 (430)
T ss_dssp CSEEEEEECSSC---CCEEECTTTCCEEEEETT--------TTEEEEEETTTTEEEE
T ss_pred eeeeeeccCCCc---eEEEEeCCCCEEEEEECC--------CCEEEEEECCCCcEEE
Confidence 3 23322222 233332 6789988532 3468999998775533
No 246
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=76.95 E-value=13 Score=33.04 Aligned_cols=104 Identities=13% Similarity=0.136 Sum_probs=49.4
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCc-EEeCCCCCCCceeeeeEEE---CCEEEEEcCcCCCCCCCCeEEEEECCC
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRR-WTRGKNMPDNRSFFAAGEL---NGRVIIAGGHDENKTALSSAWAYDLIK 212 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~-W~~~~~~~~~~~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~t 212 (358)
++.+++.|+. ...+.+||..+.. .+.+..+............ +..+++.|+.+ ..+.+||..+
T Consensus 243 ~~~~l~s~~~-------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~d------g~v~vwd~~~ 309 (430)
T 2xyi_A 243 HESLFGSVAD-------DQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSAD------KTVALWDLRN 309 (430)
T ss_dssp CTTEEEEEET-------TSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETT------SEEEEEETTC
T ss_pred CCCEEEEEeC-------CCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCC------CeEEEEeCCC
Confidence 4567766653 2478999998652 1111111111111111222 33477777654 3589999876
Q ss_pred CceEecCCCccCcCceeEEEE--CC-EEEEEeCcccCCCCceeeeeEEEECCC
Q 018336 213 DEWTELARMTQERDECEAVVI--GS-EFWVVSGYKTERQGIFDESAESYQLGT 262 (358)
Q Consensus 213 ~~W~~~~~~p~~~~~~~~~~~--~~-~lyv~gG~~~~~~~~~~~~i~~yd~~~ 262 (358)
.. ..+..+.........+.+ ++ .+++.|+.. ..+.+||...
T Consensus 310 ~~-~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d--------~~i~iwd~~~ 353 (430)
T 2xyi_A 310 LK-LKLHSFESHKDEIFQVQWSPHNETILASSGTD--------RRLHVWDLSK 353 (430)
T ss_dssp TT-SCSEEEECCSSCEEEEEECSSCTTEEEEEETT--------SCCEEEEGGG
T ss_pred CC-CCeEEeecCCCCEEEEEECCCCCCEEEEEeCC--------CcEEEEeCCC
Confidence 32 011111111111222222 33 477777653 2467788765
No 247
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=76.67 E-value=54 Score=31.32 Aligned_cols=107 Identities=7% Similarity=-0.057 Sum_probs=52.4
Q ss_pred eEEEEeCCC-CCeeecCCCCCCCCCCCceeEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCc---e
Q 018336 103 GVTVFDPVS-LTWDRLGPVPEYPAGLPLFCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNR---S 178 (358)
Q Consensus 103 ~~~~~d~~~-~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~---~ 178 (358)
.++.+|..+ ++-..+..... ... ........-+..|++...... .....++++|..+.+...+....... .
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~-~~~-~~~~~~~pDg~~l~~~~~~~~---~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~ 338 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKE-QDI-YLARVNWRDPQHLSFQRQSRD---QKKLDLVEVTLASNQQRVLAHETSPTWVPL 338 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSC-SSE-EEEEEEEEETTEEEEEEEETT---SSEEEEEEEETTTCCEEEEEEEECSSCCCC
T ss_pred EEEEEECCCCCceEEecCCCC-cce-EEEEEEeCCCCEEEEEEeccc---CCeEEEEEEECCCCceEEEEEcCCCCcCCc
Confidence 678889887 76554432211 100 111112223444554432111 12468999999998876543211110 0
Q ss_pred eeeeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecC
Q 018336 179 FFAAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELA 219 (358)
Q Consensus 179 ~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~ 219 (358)
....+. -++++++.+..+. ...++.+|.... .+.+.
T Consensus 339 ~~~~~~spdg~~~~~~~~~g----~~~l~~~~~~~~-~~~l~ 375 (741)
T 2ecf_A 339 HNSLRFLDDGSILWSSERTG----FQHLYRIDSKGK-AAALT 375 (741)
T ss_dssp CSCCEECTTSCEEEEECTTS----SCEEEEECSSSC-EEESC
T ss_pred CCceEECCCCeEEEEecCCC----ccEEEEEcCCCC-eeeee
Confidence 011222 2566666654332 256888887665 65554
No 248
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=76.53 E-value=17 Score=30.71 Aligned_cols=67 Identities=12% Similarity=0.149 Sum_probs=36.4
Q ss_pred CEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEEE--CCEEEEEeCcccCCCCceeeeeEEEECCCCc
Q 018336 187 GRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVVI--GSEFWVVSGYKTERQGIFDESAESYQLGTGE 264 (358)
Q Consensus 187 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~ 264 (358)
+..++.|+.+ ..+.+||..+........+.........+.+ ++++++.|+.+ ..+..||..+++
T Consensus 54 g~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d--------g~v~iwd~~~~~ 119 (368)
T 3mmy_A 54 GNFLIAGSWA------NDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD--------KTAKMWDLSSNQ 119 (368)
T ss_dssp SEEEEEEETT------SEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT--------SEEEEEETTTTE
T ss_pred ceEEEEECCC------CcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC--------CcEEEEEcCCCC
Confidence 4777777654 3588888876333321212111112222222 56666666542 357889998876
Q ss_pred eEE
Q 018336 265 WKR 267 (358)
Q Consensus 265 W~~ 267 (358)
-..
T Consensus 120 ~~~ 122 (368)
T 3mmy_A 120 AIQ 122 (368)
T ss_dssp EEE
T ss_pred cee
Confidence 544
No 249
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=75.14 E-value=36 Score=28.63 Aligned_cols=96 Identities=13% Similarity=0.051 Sum_probs=45.7
Q ss_pred eEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEE-CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeee
Q 018336 103 GVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASS-QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFA 181 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~ 181 (358)
.+..||..+++-...- ..... .. .+++.. ++..++.++.+ ..+.+||..+.+-...-..+.+ -..
T Consensus 55 ~i~vwd~~~~~~~~~~--~~h~~--~v-~~~~~~~~~~~l~s~~~d-------g~i~iwd~~~~~~~~~~~~~~~--v~~ 120 (369)
T 3zwl_B 55 SASVWYSLNGERLGTL--DGHTG--TI-WSIDVDCFTKYCVTGSAD-------YSIKLWDVSNGQCVATWKSPVP--VKR 120 (369)
T ss_dssp CEEEEETTTCCEEEEE--CCCSS--CE-EEEEECTTSSEEEEEETT-------TEEEEEETTTCCEEEEEECSSC--EEE
T ss_pred EEEEEeCCCchhhhhh--hhcCC--cE-EEEEEcCCCCEEEEEeCC-------CeEEEEECCCCcEEEEeecCCC--eEE
Confidence 5778888776543321 11110 11 122222 45566666542 3789999988765433222211 112
Q ss_pred eEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCC
Q 018336 182 AGE-LNGRVIIAGGHDENKTALSSAWAYDLIKD 213 (358)
Q Consensus 182 ~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~ 213 (358)
++. -++..+++++.+.. .....+.+||..+.
T Consensus 121 ~~~~~~~~~l~~~~~~~~-~~~g~i~~~d~~~~ 152 (369)
T 3zwl_B 121 VEFSPCGNYFLAILDNVM-KNPGSINIYEIERD 152 (369)
T ss_dssp EEECTTSSEEEEEECCBT-TBCCEEEEEEEEEC
T ss_pred EEEccCCCEEEEecCCcc-CCCCEEEEEEecCC
Confidence 222 24455555443311 12246788877544
No 250
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=73.48 E-value=19 Score=31.99 Aligned_cols=61 Identities=10% Similarity=0.100 Sum_probs=31.2
Q ss_pred EEEEcCcCCCCCCCCeEEEEECCCC---ceEe--cCCCccCcCceeEEEE---CCEEEEEeCcccCCCCceeeeeEEEEC
Q 018336 189 VIIAGGHDENKTALSSAWAYDLIKD---EWTE--LARMTQERDECEAVVI---GSEFWVVSGYKTERQGIFDESAESYQL 260 (358)
Q Consensus 189 iyv~GG~~~~~~~~~~~~~yd~~t~---~W~~--~~~~p~~~~~~~~~~~---~~~lyv~gG~~~~~~~~~~~~i~~yd~ 260 (358)
+++.|+.+ ..+.+||+.+. .+.. ...+.........+.+ ++.+++.++. ...+.+||.
T Consensus 196 ~l~s~~~d------g~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~--------dg~i~i~d~ 261 (430)
T 2xyi_A 196 YLLSASDD------HTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVAD--------DQKLMIWDT 261 (430)
T ss_dssp EEEEECTT------SCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEET--------TSEEEEEET
T ss_pred eEEEEeCC------CeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeC--------CCeEEEEEC
Confidence 66666544 34889998763 2221 1111111111222222 4567777654 235788998
Q ss_pred CCC
Q 018336 261 GTG 263 (358)
Q Consensus 261 ~~~ 263 (358)
.+.
T Consensus 262 ~~~ 264 (430)
T 2xyi_A 262 RNN 264 (430)
T ss_dssp TCS
T ss_pred CCC
Confidence 865
No 251
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=71.16 E-value=56 Score=29.05 Aligned_cols=115 Identities=11% Similarity=0.034 Sum_probs=65.5
Q ss_pred CceeEEEEECCEEEEEcCcCCCCCCCccee-EEEECC------CCcEEeCCC-CCCCceeeeeEEECCEEEEEcCcCCCC
Q 018336 128 PLFCQVASSQGKLVVMGGWDPASYSPVSHV-FVYDFT------TRRWTRGKN-MPDNRSFFAAGELNGRVIIAGGHDENK 199 (358)
Q Consensus 128 ~~~~~~~~~~~~lyv~Gg~~~~~~~~~~~~-~~yd~~------t~~W~~~~~-~~~~~~~~~~~~~~~~iyv~GG~~~~~ 199 (358)
..-|+.+.+++.=|.+|-..+... ..++ .+|-+. .-.-+.++. ....-...+.-.+++.+|+.---....
T Consensus 284 Te~HSFa~i~~~~fa~GyHnGDv~--PRe~G~~yfs~~~~sp~~~vrr~i~sey~~~AsEPCvkyYdgvLyLtTRgt~~~ 361 (670)
T 3ju4_A 284 TEVHSFATIDNNGFAMGYHQGDVA--PREVGLFYFPDAFNSPSNYVRRQIPSEYEPDASEPCIKYYDGVLYLITRGTRGD 361 (670)
T ss_dssp SEEEEEEECSSSCEEEEEEECSSS--SCEEEEEEETTTTTCTTCCEEEECCGGGCTTEEEEEEEEETTEEEEEEEESCTT
T ss_pred eeeeeeeEecCCceEEEeccCCCC--cceeeEEEecccccCCcceeeeechhhhccccccchhhhhCCEEEEEecCcCCC
Confidence 456778888888888875443321 2233 222221 111223332 122234456667899999985333222
Q ss_pred CCCCeEEEEECCCCceEecC-CCccCcCceeEEEECCEEEEEeCcc
Q 018336 200 TALSSAWAYDLIKDEWTELA-RMTQERDECEAVVIGSEFWVVSGYK 244 (358)
Q Consensus 200 ~~~~~~~~yd~~t~~W~~~~-~~p~~~~~~~~~~~~~~lyv~gG~~ 244 (358)
..-+.+..-+..-+.|..+. +-.......-.+.+++.||+||...
T Consensus 362 ~~GS~L~rs~d~Gq~w~slrfp~nvHhtnlPFakvgD~l~mFgsER 407 (670)
T 3ju4_A 362 RLGSSLHRSRDIGQTWESLRFPHNVHHTTLPFAKVGDDLIMFGSER 407 (670)
T ss_dssp SCCCEEEEESSTTSSCEEEECTTCCCSSCCCEEEETTEEEEEEECS
T ss_pred CCcceeeeecccCCchhheeccccccccCCCcceeCCEEEEEeccc
Confidence 33456777777788899775 2222223334568899999999654
No 252
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=70.96 E-value=46 Score=27.97 Aligned_cols=147 Identities=14% Similarity=0.128 Sum_probs=70.4
Q ss_pred cceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEECC-EEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCcee
Q 018336 101 SYGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASSQG-KLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSF 179 (358)
Q Consensus 101 ~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~-~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~ 179 (358)
...++.+|..+++-..+ . .......+-++ .|+......+. ....+|++|..+++.+.+...+. .
T Consensus 42 ~~~l~~~d~~~~~~~~l----~-----~~~~~~~SpDg~~la~~~~~~~~---~~~~l~~~~~~~g~~~~l~~~~~---~ 106 (347)
T 2gop_A 42 ENTIVIENLKNNARRFI----E-----NATMPRISPDGKKIAFMRANEEK---KVSEIWVADLETLSSKKILEAKN---I 106 (347)
T ss_dssp EEEEEEEETTTCCEEEE----E-----SCEEEEECTTSSEEEEEEEETTT---TEEEEEEEETTTTEEEEEEEESE---E
T ss_pred cceEEEEeCCCCceEEc----c-----cCCCeEECCCCCEEEEEEeccCC---CcceEEEEECCCCceEEEEcCCC---c
Confidence 34688899888776655 1 11111222244 44443321110 13469999998887766543332 1
Q ss_pred eeeEE-ECC-EEEEEcCcC-C--------------CC-----CCCCeEEEEECCCCce-EecCCCccCcCceeEEEECCE
Q 018336 180 FAAGE-LNG-RVIIAGGHD-E--------------NK-----TALSSAWAYDLIKDEW-TELARMTQERDECEAVVIGSE 236 (358)
Q Consensus 180 ~~~~~-~~~-~iyv~GG~~-~--------------~~-----~~~~~~~~yd~~t~~W-~~~~~~p~~~~~~~~~~~~~~ 236 (358)
...+. -++ .|++..... . .+ .....++++|+.++.. +.+.. + .........+.
T Consensus 107 ~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~---~~~~~~~spdg 182 (347)
T 2gop_A 107 RSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P---RFSSGIWHRDK 182 (347)
T ss_dssp EEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E---TTCEEEEETTE
T ss_pred cceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C---CcccccCCCCe
Confidence 11222 144 455443110 0 00 0135689999998877 65554 3 22233333333
Q ss_pred EEEEeCcccCCCCce-eeeeEEEECCCCceEEc
Q 018336 237 FWVVSGYKTERQGIF-DESAESYQLGTGEWKRA 268 (358)
Q Consensus 237 lyv~gG~~~~~~~~~-~~~i~~yd~~~~~W~~~ 268 (358)
+++.+.......... ...++.+| ++++..+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l 213 (347)
T 2gop_A 183 IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKM 213 (347)
T ss_dssp EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEE
T ss_pred EEEEEecccccccccccccEEEeC--CCceEEe
Confidence 555553321110001 34677777 6665544
No 253
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=70.91 E-value=25 Score=29.28 Aligned_cols=64 Identities=13% Similarity=0.189 Sum_probs=33.9
Q ss_pred CCEEEEEcCcCCCCCCCCeEEEEECCC--CceEecCCCccCcCceeEEEE----CCEEEEEeCcccCCCCceeeeeEEEE
Q 018336 186 NGRVIIAGGHDENKTALSSAWAYDLIK--DEWTELARMTQERDECEAVVI----GSEFWVVSGYKTERQGIFDESAESYQ 259 (358)
Q Consensus 186 ~~~iyv~GG~~~~~~~~~~~~~yd~~t--~~W~~~~~~p~~~~~~~~~~~----~~~lyv~gG~~~~~~~~~~~~i~~yd 259 (358)
++.+++.|+.+ ..+.+||..+ ..++.+..+.........+.+ ++++++.|+.+ ..+.+||
T Consensus 22 ~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~d--------g~v~vwd 87 (351)
T 3f3f_A 22 YGRHVATCSSD------QHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYD--------KTVKLWE 87 (351)
T ss_dssp SSSEEEEEETT------SEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETT--------SCEEEEE
T ss_pred CCCEEEEeeCC------CeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCC--------CeEEEEe
Confidence 45556666543 3577787764 344444333322222233333 36777777653 2467788
Q ss_pred CCCC
Q 018336 260 LGTG 263 (358)
Q Consensus 260 ~~~~ 263 (358)
..++
T Consensus 88 ~~~~ 91 (351)
T 3f3f_A 88 EDPD 91 (351)
T ss_dssp ECTT
T ss_pred cCCC
Confidence 7654
No 254
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=70.24 E-value=59 Score=28.92 Aligned_cols=128 Identities=9% Similarity=0.105 Sum_probs=69.5
Q ss_pred CCcEEe--CCCCCCCceeeeeEEECCEEEEEcCcCCCCCCCCeE-EEEECC-----CCce-EecCCCccCcCce--eEEE
Q 018336 164 TRRWTR--GKNMPDNRSFFAAGELNGRVIIAGGHDENKTALSSA-WAYDLI-----KDEW-TELARMTQERDEC--EAVV 232 (358)
Q Consensus 164 t~~W~~--~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~-~~yd~~-----t~~W-~~~~~~p~~~~~~--~~~~ 232 (358)
.+.|+. ++.+|..-.-|+.+.+++.-|++|-.+..-. ..++ ..|-+. ...- +.++.- ..+... .+-.
T Consensus 269 ~spW~~t~L~~i~~vTe~HSFa~i~~~~fa~GyHnGDv~-PRe~G~~yfs~~~~sp~~~vrr~i~se-y~~~AsEPCvky 346 (670)
T 3ju4_A 269 KSPWRKTDLGLIPSVTEVHSFATIDNNGFAMGYHQGDVA-PREVGLFYFPDAFNSPSNYVRRQIPSE-YEPDASEPCIKY 346 (670)
T ss_dssp TSCCEEEECCSCTTCSEEEEEEECSSSCEEEEEEECSSS-SCEEEEEEETTTTTCTTCCEEEECCGG-GCTTEEEEEEEE
T ss_pred cCCceecccccccceeeeeeeeEecCCceEEEeccCCCC-cceeeEEEecccccCCcceeeeechhh-hccccccchhhh
Confidence 445654 5556655567888999988888886554322 2222 222221 1111 122211 222222 2337
Q ss_pred ECCEEEEEeCcccCCCCceeeeeEEEECCCCceEEcCCccccCCCCCceeeeeecCccCceeccccceeeceEEEEeCCe
Q 018336 233 IGSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRAENAWKLSQCPRSNVGVGREGKLFCWAETEAAVQFGTCRVELGGC 312 (358)
Q Consensus 233 ~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~d~~~~~W~~lp~~~r~~~~~~~~~~~ 312 (358)
.+|.||++..-..... .-..+..-+.....|+.+.-. ....++... .+-.++.
T Consensus 347 YdgvLyLtTRgt~~~~--~GS~L~rs~d~Gq~w~slrfp---~nvHhtnlP----------------------FakvgD~ 399 (670)
T 3ju4_A 347 YDGVLYLITRGTRGDR--LGSSLHRSRDIGQTWESLRFP---HNVHHTTLP----------------------FAKVGDD 399 (670)
T ss_dssp ETTEEEEEEEESCTTS--CCCEEEEESSTTSSCEEEECT---TCCCSSCCC----------------------EEEETTE
T ss_pred hCCEEEEEecCcCCCC--CcceeeeecccCCchhheecc---ccccccCCC----------------------cceeCCE
Confidence 8999999964332211 123556666667789987643 213333322 3678999
Q ss_pred EEEECCCC
Q 018336 313 TLVTGSGY 320 (358)
Q Consensus 313 i~v~gG~~ 320 (358)
||+||...
T Consensus 400 l~mFgsER 407 (670)
T 3ju4_A 400 LIMFGSER 407 (670)
T ss_dssp EEEEEECS
T ss_pred EEEEeccc
Confidence 99998654
No 255
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=69.93 E-value=50 Score=27.92 Aligned_cols=65 Identities=11% Similarity=0.033 Sum_probs=37.5
Q ss_pred CCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEE-EECCEEEEEeCcccCCCCceeeeeEEEECCCCc
Q 018336 186 NGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAV-VIGSEFWVVSGYKTERQGIFDESAESYQLGTGE 264 (358)
Q Consensus 186 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~-~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~ 264 (358)
++..++.|+.+. .+.+||..++.-..............++ .-++.+++.|+.+ ..+..||..+++
T Consensus 138 ~~~~l~s~s~dg------~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~d--------g~i~iwd~~~~~ 203 (343)
T 3lrv_A 138 NTEYFIWADNRG------TIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPD--------GILDVYNLSSPD 203 (343)
T ss_dssp -CCEEEEEETTC------CEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTT--------SCEEEEESSCTT
T ss_pred CCCEEEEEeCCC------cEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCC--------CEEEEEECCCCC
Confidence 456667676543 4899999887654332222111111222 3367788877653 357889998764
No 256
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=69.53 E-value=48 Score=27.57 Aligned_cols=31 Identities=0% Similarity=-0.224 Sum_probs=18.7
Q ss_pred eEEEEeCCeEEEECCCCCCCCceEEEEECCCCceE
Q 018336 304 TCRVELGGCTLVTGSGYQGGPQEFYVVEGRNGKFR 338 (358)
Q Consensus 304 ~~~~~~~~~i~v~gG~~~~~~~~i~~yd~~~~~W~ 338 (358)
..++...+..++.++.+ ..|.+||..+..-.
T Consensus 260 ~~~~~~~~~~~~~~~~d----~~i~iwd~~~~~~~ 290 (340)
T 4aow_A 260 NALCFSPNRYWLCAATG----PSIKIWDLEGKIIV 290 (340)
T ss_dssp EEEEECSSSSEEEEEET----TEEEEEETTTTEEE
T ss_pred EeeecCCCCceeeccCC----CEEEEEECCCCeEE
Confidence 33444455666666644 77777777766554
No 257
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=68.95 E-value=74 Score=30.16 Aligned_cols=154 Identities=13% Similarity=0.191 Sum_probs=78.5
Q ss_pred eeEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCC-cEE--eC----CCCCCCceeeeeEE-ECCEEEEEcCcCCCCCC
Q 018336 130 FCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTR-RWT--RG----KNMPDNRSFFAAGE-LNGRVIIAGGHDENKTA 201 (358)
Q Consensus 130 ~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~-~W~--~~----~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~ 201 (358)
..+++...+.+|++-| +.+|+++.... ... .+ +.+|.. ...+... .++++|++-|
T Consensus 446 fDAit~~rg~~yfFKg---------~~yWr~~~~~~~~~~P~~Is~~wp~LP~~-IDAA~~~~~~~k~yFFkG------- 508 (631)
T 1ck7_A 446 FDGIAQIRGEIFFFKD---------RFIWRTVTPRDKPMGPLLVATFWPELPEK-IDAVYEAPQEEKAVFFAG------- 508 (631)
T ss_dssp CSEEEECSSSEEEECS---------SEEEEESCTTSCCEEEEEGGGTCTTSCSS-CSBCCEETTTTEEEEEET-------
T ss_pred cceeEecCCcEEEEcC---------CEEEEEcCCCCCCCCceeccccCCCCCcc-ceEEEEECCCCEEEEEec-------
Confidence 4466777899999976 25777766442 111 11 223321 1111111 2578999854
Q ss_pred CCeEEEEECCCC--ce-EecCC--CccCcCceeEE-E--ECCEEEEEeCcccCCCCceeeeeEEEECCCCceEEcCCccc
Q 018336 202 LSSAWAYDLIKD--EW-TELAR--MTQERDECEAV-V--IGSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRAENAWK 273 (358)
Q Consensus 202 ~~~~~~yd~~t~--~W-~~~~~--~p~~~~~~~~~-~--~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~~~p~ 273 (358)
+..++|+..+- -+ +.+.. +|.......++ . .++++|++-|. ..++||..+++- ...-|.
T Consensus 509 -~~yWry~~~~l~~GYPk~Is~~G~P~~~~~IDAAf~~~~~gktYFFkG~----------~ywryd~~~~~v--d~gYPk 575 (631)
T 1ck7_A 509 -NEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAGD----------KFWRYNEVKKKM--DPGFPK 575 (631)
T ss_dssp -TEEEEEETTEECTTCCEEGGGGTCCTTCCCCCBCCCCTTTCEEEEEETT----------EEEEEETTTTEE--CTTCCE
T ss_pred -CEEEEECCCccccCCCccchhcCCCCCCCcceeEEEecCCCeEEEEECC----------EEEEEcCCcccc--cCCCCc
Confidence 45788875310 00 11211 22211111222 2 46899999764 357899776531 111111
Q ss_pred cCCCCCceeeeeecCccCceeccccceeeceEEEEe--CCeEEEECCCCCCCCceEEEEECCCCc
Q 018336 274 LSQCPRSNVGVGREGKLFCWAETEAAVQFGTCRVEL--GGCTLVTGSGYQGGPQEFYVVEGRNGK 336 (358)
Q Consensus 274 ~~~~~~~~~~~~~d~~~~~W~~lp~~~r~~~~~~~~--~~~i~v~gG~~~~~~~~i~~yd~~~~~ 336 (358)
. -.+.|..+|..+ . +++.. ++++|++-| +..|+||..+.+
T Consensus 576 ~--------------i~~~w~G~p~~i--D-AAf~~~~~g~~YFFkG------~~Ywr~d~~~~~ 617 (631)
T 1ck7_A 576 L--------------IADAWNAIPDNL--D-AVVDLQGGGHSYFFKG------AYYLKLENQSLK 617 (631)
T ss_dssp E--------------TTTSCSSCCTTC--C-EEECCTTSCBCEEEET------TEEECCBTTBTT
T ss_pred c--------------hHhhcCCCCCCC--c-EeEEEcCCCeEEEEEC------CEEEEEeCccce
Confidence 0 012454444322 1 22333 489999988 478899887654
No 258
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=68.87 E-value=27 Score=30.84 Aligned_cols=112 Identities=17% Similarity=0.076 Sum_probs=0.0
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCC-------------CCCceeeeeEEECCEEEEE---cCcCCCCC
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNM-------------PDNRSFFAAGELNGRVIIA---GGHDENKT 200 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~-------------~~~~~~~~~~~~~~~iyv~---GG~~~~~~ 200 (358)
+++++...- ...++++|..++.-+.+.+. |......+...-++.+|+. ++...++.
T Consensus 237 dG~~~~vs~--------~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~ 308 (386)
T 3sjl_D 237 AGRLVWPTY--------TGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKT 308 (386)
T ss_dssp TTEEEEEBT--------TSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTS
T ss_pred CCcEEEEeC--------CCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCC
Q ss_pred CCCeEEEEECCCCceEecCCCccCcCceeEEEECC-EEEEEeCcccCCCCceeeeeEEEECCCCc
Q 018336 201 ALSSAWAYDLIKDEWTELARMTQERDECEAVVIGS-EFWVVSGYKTERQGIFDESAESYQLGTGE 264 (358)
Q Consensus 201 ~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~~~-~lyv~gG~~~~~~~~~~~~i~~yd~~~~~ 264 (358)
..+.+.++|.+|.+-..--++.....+.....-+. .||+..+. .+.+.+||..+++
T Consensus 309 ~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~~--------~~~VsViD~~t~k 365 (386)
T 3sjl_D 309 ASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTG--------DKTLYIHDAESGE 365 (386)
T ss_dssp CEEEEEEEETTTCCEEEEEEEEEEECEEEECSSSSCEEEEEETT--------TTEEEEEETTTCC
T ss_pred CCCEEEEEECCCCeEEEEEECCCCcceEEECCCCCeEEEEEcCC--------CCeEEEEECCCCc
No 259
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=68.64 E-value=81 Score=29.86 Aligned_cols=201 Identities=5% Similarity=-0.109 Sum_probs=100.0
Q ss_pred eEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEE--CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceee
Q 018336 103 GVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASS--QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFF 180 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~--~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~ 180 (358)
.+...|..+..-..+.+++.- ....+++.. ++.||+.... ...++++++.....+.+...... .-.
T Consensus 16 ~I~~i~l~~~~~~~~~~~~~~----~~~~~l~~d~~~~~lywtD~~-------~~~I~r~~~~g~~~~~v~~~g~~-~P~ 83 (628)
T 4a0p_A 16 DIRRISLETNNNNVAIPLTGV----KEASALDFDVTDNRIYWTDIS-------LKTISRAFMNGSALEHVVEFGLD-YPE 83 (628)
T ss_dssp EEEEEESSCTTCEEECCCCSC----SCEEEEEEETTTTEEEEEETT-------TTEEEEEETTSCSCEEEECSSCS-CCC
T ss_pred cEEEEECCCCCcceEEEcCCC----CceEEEEEECCCCEEEEEECC-------CCeEEEEECCCCCcEEEEeCCCC-Ccc
Confidence 677888876554333333221 112234333 6899998642 35788999876655544322111 112
Q ss_pred eeEE--ECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecC--CCccCcCceeEEEE--CCEEEEEe-CcccCCCCceee
Q 018336 181 AAGE--LNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELA--RMTQERDECEAVVI--GSEFWVVS-GYKTERQGIFDE 253 (358)
Q Consensus 181 ~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~--~~p~~~~~~~~~~~--~~~lyv~g-G~~~~~~~~~~~ 253 (358)
++|+ .++.||+.-. ....++++++....=+.+. .+..+ ..+++- +|.||+.- |. ..
T Consensus 84 GlAvD~~~~~LY~tD~------~~~~I~v~~~dG~~~~~l~~~~l~~P---~~iavdp~~G~lY~tD~g~--------~~ 146 (628)
T 4a0p_A 84 GMAVDWLGKNLYWADT------GTNRIEVSKLDGQHRQVLVWKDLDSP---RALALDPAEGFMYWTEWGG--------KP 146 (628)
T ss_dssp EEEEETTTTEEEEEET------TTTEEEEEETTSTTCEEEECSSCCCE---EEEEEETTTTEEEEEECSS--------SC
T ss_pred eEEEEeCCCEEEEEEC------CCCEEEEEecCCCcEEEEEeCCCCCc---ccEEEccCCCeEEEeCCCC--------CC
Confidence 3444 4789999832 2367999998654323322 23222 233433 68899885 21 23
Q ss_pred eeEEEECCCCceEEcC-CccccC------CCCCceeee-------eecCccCceeccccceeeceEEEEeCCeEEEECCC
Q 018336 254 SAESYQLGTGEWKRAE-NAWKLS------QCPRSNVGV-------GREGKLFCWAETEAAVQFGTCRVELGGCTLVTGSG 319 (358)
Q Consensus 254 ~i~~yd~~~~~W~~~~-~~p~~~------~~~~~~~~~-------~~d~~~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~ 319 (358)
.|++++++...-+.+. .+..+. ...+-+..- .+|.....=..+........+++..+++||+.--.
T Consensus 147 ~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~~l~~P~glav~~~~ly~tD~~ 226 (628)
T 4a0p_A 147 KIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIADDLPHPFGLTQYQDYIYWTDWS 226 (628)
T ss_dssp EEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECCSCEEEEEEETTEEEEEETT
T ss_pred EEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEeeccCCCceEEEEECCEEEEecCC
Confidence 5667776654433322 110000 000000000 22221111011222223445677788999998533
Q ss_pred CCCCCceEEEEECCCCc
Q 018336 320 YQGGPQEFYVVEGRNGK 336 (358)
Q Consensus 320 ~~~~~~~i~~yd~~~~~ 336 (358)
. ..|+++|..+++
T Consensus 227 ~----~~I~~~dk~tg~ 239 (628)
T 4a0p_A 227 R----RSIERANKTSGQ 239 (628)
T ss_dssp T----TEEEEEETTTCC
T ss_pred C----CEEEEEECCCCC
Confidence 2 578888866543
No 260
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=68.13 E-value=55 Score=27.76 Aligned_cols=140 Identities=14% Similarity=0.065 Sum_probs=70.2
Q ss_pred EEEEeCCCCCeeecCCCCCCCCCCCceeEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCC-CCceeeee
Q 018336 104 VTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMP-DNRSFFAA 182 (358)
Q Consensus 104 ~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~-~~~~~~~~ 182 (358)
++.-.-.-.+|+.+........ .....++...+.+|+.|.. ..+++-.-.-.+|+.+.... .+-.....
T Consensus 58 i~~s~DgG~tW~~~~~~~~~~~--~~~~~i~~~~~~~~~~g~~--------g~i~~S~DgG~tW~~~~~~~~~~~~~~~i 127 (327)
T 2xbg_A 58 LMETRDGGQTWEPRTLVLDHSD--YRFNSVSFQGNEGWIVGEP--------PIMLHTTDGGQSWSQIPLDPKLPGSPRLI 127 (327)
T ss_dssp EEEESSTTSSCEECCCCCSCCC--CEEEEEEEETTEEEEEEET--------TEEEEESSTTSSCEECCCCTTCSSCEEEE
T ss_pred EEEeCCCCCCCeECCCCCCCCC--ccEEEEEecCCeEEEEECC--------CeEEEECCCCCCceECccccCCCCCeEEE
Confidence 4444444568988854221111 2234455557788887631 23454333357899876431 22222233
Q ss_pred E-EECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEEE-CCEEEEEeCcccCCCCceeeeeEEE-E
Q 018336 183 G-ELNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVVI-GSEFWVVSGYKTERQGIFDESAESY-Q 259 (358)
Q Consensus 183 ~-~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~-~~~lyv~gG~~~~~~~~~~~~i~~y-d 259 (358)
+ .-++.+|+.+.. ..++.-+-.-.+|+.+...... ..+.++.. ++++|++|.. ..++.- |
T Consensus 128 ~~~~~~~~~~~~~~-------g~v~~S~DgG~tW~~~~~~~~~-~~~~~~~~~~~~~~~~g~~---------G~~~~S~d 190 (327)
T 2xbg_A 128 KALGNGSAEMITNV-------GAIYRTKDSGKNWQALVQEAIG-VMRNLNRSPSGEYVAVSSR---------GSFYSTWE 190 (327)
T ss_dssp EEEETTEEEEEETT-------CCEEEESSTTSSEEEEECSCCC-CEEEEEECTTSCEEEEETT---------SSEEEEEC
T ss_pred EEECCCCEEEEeCC-------ccEEEEcCCCCCCEEeecCCCc-ceEEEEEcCCCcEEEEECC---------CcEEEEeC
Confidence 3 346788887631 1244433345689987642221 22333332 5567766521 123333 3
Q ss_pred CCCCceEEcCC
Q 018336 260 LGTGEWKRAEN 270 (358)
Q Consensus 260 ~~~~~W~~~~~ 270 (358)
....+|+.+..
T Consensus 191 ~gG~tW~~~~~ 201 (327)
T 2xbg_A 191 PGQTAWEPHNR 201 (327)
T ss_dssp TTCSSCEEEEC
T ss_pred CCCCceeECCC
Confidence 33578998754
No 261
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=68.13 E-value=51 Score=27.33 Aligned_cols=134 Identities=11% Similarity=0.056 Sum_probs=61.2
Q ss_pred eEEEEeCCCCCeeecCCCCCCCCCCCceeEEEE-ECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCC-Cceee
Q 018336 103 GVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVAS-SQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPD-NRSFF 180 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~-~~~~~ 180 (358)
.+..||..+++-... +..... ... +++. -++.+++.|+.+ ..+.+||..++.- ....+.. ...-.
T Consensus 78 ~i~vwd~~~~~~~~~--~~~h~~--~v~-~~~~~~~~~~l~sgs~D-------~~v~lWd~~~~~~-~~~~~~~h~~~v~ 144 (304)
T 2ynn_A 78 RIRVFNYNTGEKVVD--FEAHPD--YIR-SIAVHPTKPYVLSGSDD-------LTVKLWNWENNWA-LEQTFEGHEHFVM 144 (304)
T ss_dssp EEEEEETTTCCEEEE--EECCSS--CEE-EEEECSSSSEEEEEETT-------SCEEEEEGGGTTE-EEEEECCCCSCEE
T ss_pred EEEEEECCCCcEEEE--EeCCCC--cEE-EEEEcCCCCEEEEECCC-------CeEEEEECCCCcc-hhhhhcccCCcEE
Confidence 678888887753221 111110 111 2222 245566666643 3688888876421 1111111 11111
Q ss_pred eeEEE--CCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEEE----CCEEEEEeCcccCCCCceeee
Q 018336 181 AAGEL--NGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVVI----GSEFWVVSGYKTERQGIFDES 254 (358)
Q Consensus 181 ~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~----~~~lyv~gG~~~~~~~~~~~~ 254 (358)
+++.. ++.+++.|+.+ ..+.+||..+..-...-..... .....+.+ ++.+++.|+.+ ..
T Consensus 145 ~v~~~p~~~~~l~sgs~D------~~v~iwd~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~l~s~s~D--------~~ 209 (304)
T 2ynn_A 145 CVAFNPKDPSTFASGCLD------RTVKVWSLGQSTPNFTLTTGQE-RGVNYVDYYPLPDKPYMITASDD--------LT 209 (304)
T ss_dssp EEEECTTCTTEEEEEETT------SEEEEEETTCSSCSEEEECCCT-TCEEEEEECCSTTCCEEEEEETT--------SE
T ss_pred EEEECCCCCCEEEEEeCC------CeEEEEECCCCCccceeccCCc-CcEEEEEEEEcCCCCEEEEEcCC--------Ce
Confidence 22222 34567777654 3588888865421110000011 11112222 45566666542 35
Q ss_pred eEEEECCCCc
Q 018336 255 AESYQLGTGE 264 (358)
Q Consensus 255 i~~yd~~~~~ 264 (358)
+..||..+++
T Consensus 210 i~iWd~~~~~ 219 (304)
T 2ynn_A 210 IKIWDYQTKS 219 (304)
T ss_dssp EEEEETTTTE
T ss_pred EEEEeCCCCc
Confidence 7788988764
No 262
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=66.76 E-value=48 Score=26.56 Aligned_cols=93 Identities=24% Similarity=0.362 Sum_probs=50.1
Q ss_pred EEEEECCEEEEEcCcCCCCCCCcceeEEEECCCC-cEE-----eCC---CCCCC--ceeeeeEEE---CCEEEEEcCcCC
Q 018336 132 QVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTR-RWT-----RGK---NMPDN--RSFFAAGEL---NGRVIIAGGHDE 197 (358)
Q Consensus 132 ~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~-~W~-----~~~---~~~~~--~~~~~~~~~---~~~iyv~GG~~~ 197 (358)
++...++++|++-| +.+|+|+..++ +-. .+. .+|.. ...-.+|.. ++++|++-|
T Consensus 67 AA~~~~~~~yfFkG---------~~yw~~~~~~~~~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG--- 134 (219)
T 1hxn_A 67 AAFSWEDKLYLIQD---------TKVYVFLTKGGYTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAG--- 134 (219)
T ss_dssp EEEEETTEEEEEET---------TEEEEEECSSSCEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEET---
T ss_pred EEEEECCcEEEecC---------CEEEEEeCCCCceecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeC---
Confidence 44455899999976 37999997542 111 111 12222 112333332 578999965
Q ss_pred CCCCCCeEEEEECCCC---ceEecCCCccCcCceeEEE------------ECCEEEEEeCc
Q 018336 198 NKTALSSAWAYDLIKD---EWTELARMTQERDECEAVV------------IGSEFWVVSGY 243 (358)
Q Consensus 198 ~~~~~~~~~~yd~~t~---~W~~~~~~p~~~~~~~~~~------------~~~~lyv~gG~ 243 (358)
+..+.||..+. .|...+.+|.... ++.. .++.+|++-|.
T Consensus 135 -----~~ywr~d~~~~P~~i~~~~~g~p~~vd--Aa~~~~~~~~~~~~~~~~~~~YFFkg~ 188 (219)
T 1hxn_A 135 -----RRLWWLDLKSGAQATWTELPWPHEKVD--GALCMEKPLGPNSCSTSGPNLYLIHGP 188 (219)
T ss_dssp -----TEEEEEEGGGGGGCCCEEECCSCSCCS--EEEEESSCSSSCCSCSSSCEEEEEETT
T ss_pred -----CEEEEEeCCCCceEhhhcCCCCCCCcC--EEEEccccccccceeccCCeEEEEECC
Confidence 45788887542 3443333332222 2222 24678888764
No 263
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=66.71 E-value=65 Score=28.06 Aligned_cols=144 Identities=12% Similarity=0.152 Sum_probs=75.4
Q ss_pred eEEEEeCCC--CCeeecCCCCCCCCCCCceeEEEEE---CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCC---C
Q 018336 103 GVTVFDPVS--LTWDRLGPVPEYPAGLPLFCQVASS---QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNM---P 174 (358)
Q Consensus 103 ~~~~~d~~~--~~W~~~~~~~~~~~~~~~~~~~~~~---~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~---~ 174 (358)
.+..++... .+|..+.+.... ....+++.. .+.||+.+.... .-..+++.+-...+|+.+... +
T Consensus 32 Gl~~~~~~~~g~~W~~~~~~~~~----~~v~~i~~dp~~~~~l~~g~~~g~----~g~gl~~s~D~G~tW~~~~~~~~~~ 103 (394)
T 3b7f_A 32 GAWFLASDPARRTWELRGPVFLG----HTIHHIVQDPREPERMLMAARTGH----LGPTVFRSDDGGGNWTEATRPPAFN 103 (394)
T ss_dssp EEEEEEECTTSCSEEEEEEESTT----SEEEEEEECSSSTTCEEEEEEC------CCEEEEEESSTTSCCEECSBCCCCC
T ss_pred ceEEEECCCCCCCceECCccCCC----CceEEEEECCCCCCeEEEEecCCC----CCccEEEeCCCCCCceECCccccCC
Confidence 356676654 689876321110 112233333 467887654210 012578887778899987532 2
Q ss_pred CC--c-------eeeeeEEE----CCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCC---ccC-------------c
Q 018336 175 DN--R-------SFFAAGEL----NGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARM---TQE-------------R 225 (358)
Q Consensus 175 ~~--~-------~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~---p~~-------------~ 225 (358)
.. + .-.+++.. .+.+|+.+. ...++..+-...+|+.+... |.. .
T Consensus 104 ~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~-------~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~ 176 (394)
T 3b7f_A 104 KAPEGETGRVVDHVFWLTPGHASEPGTWYAGTS-------PQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDG 176 (394)
T ss_dssp CCC----CCCCCEEEEEEECCTTSTTCEEEEEE-------TTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCC
T ss_pred CcccccccccccceeEEEeCCCCCCCEEEEEec-------CCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCC
Confidence 11 1 11122222 466776542 13577877778899987532 210 0
Q ss_pred CceeEEEEC----CEEEEEeCcccCCCCceeeeeEEEECCCCceEEcCC
Q 018336 226 DECEAVVIG----SEFWVVSGYKTERQGIFDESAESYQLGTGEWKRAEN 270 (358)
Q Consensus 226 ~~~~~~~~~----~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~~ 270 (358)
.....+.++ +.||+.... ..+++.+-...+|+.+..
T Consensus 177 ~~i~~i~~d~~~~~~l~vg~~~---------ggl~~s~DgG~tW~~~~~ 216 (394)
T 3b7f_A 177 PKMHSILVDPRDPKHLYIGMSS---------GGVFESTDAGTDWKPLNR 216 (394)
T ss_dssp CEEEEEEECTTCTTCEEEEEET---------BEEEEESSTTSSCEECCT
T ss_pred CceeEEEECCCCCCEEEEEECC---------CCEEEECCCCCCceECCC
Confidence 111223333 567776421 235677777789998864
No 264
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=66.26 E-value=57 Score=27.20 Aligned_cols=137 Identities=7% Similarity=0.006 Sum_probs=69.9
Q ss_pred eEEEEeCCCCCeeecCCCCCCCCCCCceeEEE-EECCEEEEEcCcCCCCCCCcceeEEEECCCCc---EEeCCC----CC
Q 018336 103 GVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVA-SSQGKLVVMGGWDPASYSPVSHVFVYDFTTRR---WTRGKN----MP 174 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~---W~~~~~----~~ 174 (358)
.+..||+.+++...+...+.. ......+ ..++.+|+.... ...+|++|+.+.+ |..-+. .+
T Consensus 96 ~v~~~d~~~g~~~~~~~~~~~----~~~~g~~~~~~~~~~v~d~~-------~g~i~~~d~~~~~~~v~~~~~~~~~~~~ 164 (306)
T 2p4o_A 96 PVVSLVKSDGTVETLLTLPDA----IFLNGITPLSDTQYLTADSY-------RGAIWLIDVVQPSGSIWLEHPMLARSNS 164 (306)
T ss_dssp EEEEEECTTSCEEEEEECTTC----SCEEEEEESSSSEEEEEETT-------TTEEEEEETTTTEEEEEEECGGGSCSST
T ss_pred eEEEEcCCCCeEEEEEeCCCc----cccCcccccCCCcEEEEECC-------CCeEEEEeCCCCcEeEEEECCccccccc
Confidence 477788888877665444321 1122333 235567776421 3479999987642 211110 11
Q ss_pred -CCc-eeeeeEEECCEEEEEcCcCCCCCCCCeEEEEECCC-CceE---ecCCCccCcCceeEE-EECCEEEEEeCcccCC
Q 018336 175 -DNR-SFFAAGELNGRVIIAGGHDENKTALSSAWAYDLIK-DEWT---ELARMTQERDECEAV-VIGSEFWVVSGYKTER 247 (358)
Q Consensus 175 -~~~-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t-~~W~---~~~~~p~~~~~~~~~-~~~~~lyv~gG~~~~~ 247 (358)
... ...+...-++.+|+.-. ....+.+|+... ++.. .+..... ...++ --+|+||+....
T Consensus 165 ~~~~~~pngis~dg~~lyv~d~------~~~~I~~~~~~~~g~~~~~~~~~~~~~---P~gi~vd~dG~l~va~~~---- 231 (306)
T 2p4o_A 165 ESVFPAANGLKRFGNFLYVSNT------EKMLLLRIPVDSTDKPGEPEIFVEQTN---IDDFAFDVEGNLYGATHI---- 231 (306)
T ss_dssp TCCSCSEEEEEEETTEEEEEET------TTTEEEEEEBCTTSCBCCCEEEEESCC---CSSEEEBTTCCEEEECBT----
T ss_pred cCCCCcCCCcCcCCCEEEEEeC------CCCEEEEEEeCCCCCCCccEEEeccCC---CCCeEECCCCCEEEEeCC----
Confidence 111 11122334568998732 236799999865 3221 1111111 11222 236788887532
Q ss_pred CCceeeeeEEEECCCCceEEc
Q 018336 248 QGIFDESAESYQLGTGEWKRA 268 (358)
Q Consensus 248 ~~~~~~~i~~yd~~~~~W~~~ 268 (358)
.+.|.+||+. ++...+
T Consensus 232 ----~~~V~~~~~~-G~~~~~ 247 (306)
T 2p4o_A 232 ----YNSVVRIAPD-RSTTII 247 (306)
T ss_dssp ----TCCEEEECTT-CCEEEE
T ss_pred ----CCeEEEECCC-CCEEEE
Confidence 3467889986 544433
No 265
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=66.00 E-value=3.2 Score=23.75 Aligned_cols=27 Identities=22% Similarity=0.180 Sum_probs=20.7
Q ss_pred cccCCCCCCCcHHHHHHHhccCCcchh
Q 018336 21 AEFGELVPGLPEEISLECLTRLHYSTH 47 (358)
Q Consensus 21 ~~~~~~~~~Lp~d~~~~il~rlp~~~~ 47 (358)
+.+...++.||.|+-+|+|+--....+
T Consensus 15 ~VD~eVF~~LP~dIQ~Ells~~~~e~~ 41 (48)
T 2kwv_A 15 GVDQEVFKQLPADIQEEILSGKSRENL 41 (48)
T ss_dssp TCCGGGTTTSCHHHHHHHTTCCCSCCC
T ss_pred CCCHHHHHHCcHHHHHHHHhcchHHhh
Confidence 345667889999999999987665543
No 266
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=65.75 E-value=62 Score=27.45 Aligned_cols=146 Identities=5% Similarity=-0.132 Sum_probs=79.5
Q ss_pred ECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCC--CCCCCceeeeeEE--ECCEEEEEcCcCCCCCCCCeEEEEECC
Q 018336 136 SQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGK--NMPDNRSFFAAGE--LNGRVIIAGGHDENKTALSSAWAYDLI 211 (358)
Q Consensus 136 ~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~--~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~ 211 (358)
.++.||+.-.. ...++++++....-+.+. .+..| .+.++ .++.||+.--. ....++++++.
T Consensus 89 ~~g~ly~~d~~-------~~~I~~~~~dG~~~~~l~~~~~~~P---~giavdp~~g~ly~td~~-----~~~~I~r~~~d 153 (318)
T 3sov_A 89 LGEKLYWTDSE-------TNRIEVSNLDGSLRKVLFWQELDQP---RAIALDPSSGFMYWTDWG-----EVPKIERAGMD 153 (318)
T ss_dssp TTTEEEEEETT-------TTEEEEEETTSCSCEEEECSSCSSE---EEEEEEGGGTEEEEEECS-----SSCEEEEEETT
T ss_pred CCCeEEEEECC-------CCEEEEEECCCCcEEEEEeCCCCCc---cEEEEeCCCCEEEEEecC-----CCCEEEEEEcC
Confidence 47899998542 357899998764433332 22222 23333 36889987411 13579999886
Q ss_pred CCceEecCCCccCcCceeEEEE--CCEEEEEeCcccCCCCceeeeeEEEECCCCceEEcCCccccCCCCCceeeeeecCc
Q 018336 212 KDEWTELARMTQERDECEAVVI--GSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRAENAWKLSQCPRSNVGVGREGK 289 (358)
Q Consensus 212 t~~W~~~~~~p~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~d~~ 289 (358)
...-+.+..-. .....++++- +++||+.-.. ...|+++|+....-+.+..-. .
T Consensus 154 G~~~~~~~~~~-l~~Pnglavd~~~~~lY~aD~~--------~~~I~~~d~dG~~~~~~~~~~----~------------ 208 (318)
T 3sov_A 154 GSSRFIIINSE-IYWPNGLTLDYEEQKLYWADAK--------LNFIHKSNLDGTNRQAVVKGS----L------------ 208 (318)
T ss_dssp SCSCEEEECSS-CSCEEEEEEETTTTEEEEEETT--------TTEEEEEETTSCSCEEEECSC----C------------
T ss_pred CCCeEEEEECC-CCCccEEEEeccCCEEEEEECC--------CCEEEEEcCCCCceEEEecCC----C------------
Confidence 43322221111 1111233433 6789998642 457888998753323222100 0
Q ss_pred cCceeccccceeeceEEEEeCCeEEEECCCCCCCCceEEEEECCCCc
Q 018336 290 LFCWAETEAAVQFGTCRVELGGCTLVTGSGYQGGPQEFYVVEGRNGK 336 (358)
Q Consensus 290 ~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~~~~~~i~~yd~~~~~ 336 (358)
....+++..++.||+.--.. ..|+++|+.+++
T Consensus 209 -----------~~P~glav~~~~lywtd~~~----~~V~~~~~~~G~ 240 (318)
T 3sov_A 209 -----------PHPFALTLFEDILYWTDWST----HSILACNKYTGE 240 (318)
T ss_dssp -----------SCEEEEEEETTEEEEEETTT----TEEEEEETTTCC
T ss_pred -----------CCceEEEEeCCEEEEEecCC----CeEEEEECCCCC
Confidence 11224556788999883322 578888886554
No 267
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=64.70 E-value=68 Score=27.55 Aligned_cols=143 Identities=8% Similarity=-0.026 Sum_probs=71.8
Q ss_pred ceeEEEECCCCcEEeCCCCCCCceeeeeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCc--eeEE
Q 018336 155 SHVFVYDFTTRRWTRGKNMPDNRSFFAAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDE--CEAV 231 (358)
Q Consensus 155 ~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~--~~~~ 231 (358)
..+.++|+.+.+-......... -..++. -++++++.++. ..+.+++..++.-............ ....
T Consensus 157 ~~i~iwd~~~~~~~~~~~~~~~--V~~v~fspdg~~l~s~s~-------~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~f 227 (365)
T 4h5i_A 157 AIMRIIDPSDLTEKFEIETRGE--VKDLHFSTDGKVVAYITG-------SSLEVISTVTGSCIARKTDFDKNWSLSKINF 227 (365)
T ss_dssp CEEEEEETTTTEEEEEEECSSC--CCEEEECTTSSEEEEECS-------SCEEEEETTTCCEEEEECCCCTTEEEEEEEE
T ss_pred CEEEEeECCCCcEEEEeCCCCc--eEEEEEccCCceEEeccc-------eeEEEEEeccCcceeeeecCCCCCCEEEEEE
Confidence 4688999988765432211111 112222 25666665541 2477778777654432211111111 1122
Q ss_pred EECCEEEEEeCcccCCCCceeeeeEEEECCCCceEEcCCccccCCCCCceeeeeecCccCceeccccceeeceEEEEeCC
Q 018336 232 VIGSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRAENAWKLSQCPRSNVGVGREGKLFCWAETEAAVQFGTCRVELGG 311 (358)
Q Consensus 232 ~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~d~~~~~W~~lp~~~r~~~~~~~~~~ 311 (358)
.-+++.++.++..... ...+..+|................ .... ..+..+.-++
T Consensus 228 spdg~~l~~~s~d~~~----~~~i~~~~~~~~~~~~~~~~~~~~-~~~~---------------------V~~~~~Spdg 281 (365)
T 4h5i_A 228 IADDTVLIAASLKKGK----GIVLTKISIKSGNTSVLRSKQVTN-RFKG---------------------ITSMDVDMKG 281 (365)
T ss_dssp EETTEEEEEEEESSSC----CEEEEEEEEETTEEEEEEEEEEES-SCSC---------------------EEEEEECTTS
T ss_pred cCCCCEEEEEecCCcc----eeEEeecccccceecceeeeeecC-CCCC---------------------eEeEEECCCC
Confidence 4578888887654332 234566776665544332211000 0000 0111234578
Q ss_pred eEEEECCCCCCCCceEEEEECCCCc
Q 018336 312 CTLVTGSGYQGGPQEFYVVEGRNGK 336 (358)
Q Consensus 312 ~i~v~gG~~~~~~~~i~~yd~~~~~ 336 (358)
++++.|+.+ ..|.+||..+.+
T Consensus 282 ~~lasgs~D----~~V~iwd~~~~~ 302 (365)
T 4h5i_A 282 ELAVLASND----NSIALVKLKDLS 302 (365)
T ss_dssp CEEEEEETT----SCEEEEETTTTE
T ss_pred CceEEEcCC----CEEEEEECCCCc
Confidence 888888865 578899988765
No 268
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=64.24 E-value=65 Score=29.43 Aligned_cols=101 Identities=7% Similarity=0.049 Sum_probs=47.5
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCce
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDEW 215 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W 215 (358)
++..++.++.+ ..+.+||.....-..+.....+ -.+++. -++++++.|+.+ ..+.+||.....-
T Consensus 437 d~~~l~~~~~d-------~~v~~w~~~~~~~~~~~~~~~~--v~~~~~spd~~~las~~~d------~~i~iw~~~~~~~ 501 (577)
T 2ymu_A 437 DDQTIASASDD-------KTVKLWNRNGQLLQTLTGHSSS--VRGVAFSPDGQTIASASDD------KTVKLWNRNGQLL 501 (577)
T ss_dssp TSSEEEEEETT-------SEEEEEETTSCEEEEEECCSSC--EEEEEECTTSCEEEEEETT------SEEEEEETTSCEE
T ss_pred CCCEEEEEcCC-------CEEEEEECCCCEEEEEcCCCCC--EEEEEEcCCCCEEEEEeCC------CEEEEEcCCCCEE
Confidence 45555555432 3678888655443333221111 112222 256666666543 3588888644332
Q ss_pred EecCCCccCcCceeEE--EECCEEEEEeCcccCCCCceeeeeEEEECCCC
Q 018336 216 TELARMTQERDECEAV--VIGSEFWVVSGYKTERQGIFDESAESYQLGTG 263 (358)
Q Consensus 216 ~~~~~~p~~~~~~~~~--~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~ 263 (358)
+.+.... .....+ .-++++.+.|+.+ ..+..||....
T Consensus 502 ~~~~~h~---~~v~~l~~s~dg~~l~s~~~d--------g~v~lwd~~~~ 540 (577)
T 2ymu_A 502 QTLTGHS---SSVRGVAFSPDGQTIASASDD--------KTVKLWNRNGQ 540 (577)
T ss_dssp EEEECCS---SCEEEEEECTTSSCEEEEETT--------SEEEEECTTSC
T ss_pred EEEeCCC---CCEEEEEEcCCCCEEEEEECc--------CEEEEEeCCCC
Confidence 3222111 111122 2366666666542 24677886443
No 269
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=62.86 E-value=45 Score=29.22 Aligned_cols=66 Identities=8% Similarity=0.109 Sum_probs=37.3
Q ss_pred CCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEEE--CCEEEEEeCcccCCCCceeeeeEEEECCCC
Q 018336 186 NGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVVI--GSEFWVVSGYKTERQGIFDESAESYQLGTG 263 (358)
Q Consensus 186 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~ 263 (358)
++.+++.|+.+ ..+.+||..+.+-...-..+........+.+ ++++++.|+.+ ..+..||..++
T Consensus 181 ~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d--------g~i~iwd~~~~ 246 (437)
T 3gre_A 181 EKSLLVALTNL------SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR--------GIIDIWDIRFN 246 (437)
T ss_dssp SCEEEEEEETT------SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT--------SCEEEEETTTT
T ss_pred CCCEEEEEeCC------CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC--------CeEEEEEcCCc
Confidence 46677776644 3699999987654322111111112222333 66777777653 35788999876
Q ss_pred ce
Q 018336 264 EW 265 (358)
Q Consensus 264 ~W 265 (358)
+.
T Consensus 247 ~~ 248 (437)
T 3gre_A 247 VL 248 (437)
T ss_dssp EE
T ss_pred cE
Confidence 54
No 270
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=62.34 E-value=59 Score=26.04 Aligned_cols=102 Identities=17% Similarity=0.204 Sum_probs=53.7
Q ss_pred EEEE-ECCEEEEEcCcCCCCCCCcceeEEEECCCCcE--EeC----CCCCCCceeeeeEEECCEEEEEcCcCCCCCCCCe
Q 018336 132 QVAS-SQGKLVVMGGWDPASYSPVSHVFVYDFTTRRW--TRG----KNMPDNRSFFAAGELNGRVIIAGGHDENKTALSS 204 (358)
Q Consensus 132 ~~~~-~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W--~~~----~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~ 204 (358)
+++. .++.+|++-| +.+|+++...... ..+ +.+|... . ++...++++|++-| +.
T Consensus 22 Ai~~~~~g~~yfFkg---------~~~Wr~~~~~~~~~p~~Is~~wpgLP~~I-D-AA~~~~~~~yfFkG--------~~ 82 (219)
T 1hxn_A 22 AMVSDNHGATYVFSG---------SHYWRLDTNRDGWHSWPIAHQWPQGPSTV-D-AAFSWEDKLYLIQD--------TK 82 (219)
T ss_dssp EEEECTTSCEEEEET---------TEEEESSSSSCTTCCEEGGGTCTTSCSSC-S-EEEEETTEEEEEET--------TE
T ss_pred EEEECCCCcEEEEeC---------CEEEEEcCCCCCCCceEhhhhccCCCCCc-c-EEEEECCcEEEecC--------CE
Confidence 4444 5788999976 2577776543221 111 2233221 1 22234899999955 45
Q ss_pred EEEEECCCC-ce-----EecC---CCccC--cCceeEE-EE--CCEEEEEeCcccCCCCceeeeeEEEECCC
Q 018336 205 AWAYDLIKD-EW-----TELA---RMTQE--RDECEAV-VI--GSEFWVVSGYKTERQGIFDESAESYQLGT 262 (358)
Q Consensus 205 ~~~yd~~t~-~W-----~~~~---~~p~~--~~~~~~~-~~--~~~lyv~gG~~~~~~~~~~~~i~~yd~~~ 262 (358)
+++|+..++ +- +.+. .+|.. .....++ .. ++++|++-|. ..+.||..+
T Consensus 83 yw~~~~~~~~~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG~----------~ywr~d~~~ 144 (219)
T 1hxn_A 83 VYVFLTKGGYTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAGR----------RLWWLDLKS 144 (219)
T ss_dssp EEEEECSSSCEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEETT----------EEEEEEGGG
T ss_pred EEEEeCCCCceecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeCC----------EEEEEeCCC
Confidence 888886532 11 1111 23332 1112233 22 6889999864 347788654
No 271
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=60.04 E-value=48 Score=26.70 Aligned_cols=101 Identities=8% Similarity=-0.002 Sum_probs=54.7
Q ss_pred EECCEEEEEcCcCCCCCCCcceeEEEE--CCC-------------CcEEeCCCCCCCceeeeeEE---ECCEEEEEcCcC
Q 018336 135 SSQGKLVVMGGWDPASYSPVSHVFVYD--FTT-------------RRWTRGKNMPDNRSFFAAGE---LNGRVIIAGGHD 196 (358)
Q Consensus 135 ~~~~~lyv~Gg~~~~~~~~~~~~~~yd--~~t-------------~~W~~~~~~~~~~~~~~~~~---~~~~iyv~GG~~ 196 (358)
..++.+|++-| +.+|+|+ +.+ ..|.-++....+. ...+|. .++++|++-|
T Consensus 70 ~~~g~~~fFKg---------~~~Wr~~~~~~~~~~~~~~gP~~I~~~w~gLp~~~~p~-~IDAA~~~~~~~k~yfFkG-- 137 (227)
T 3lp9_A 70 TENNEAFIFYE---------NFCALIDYAPHSKKDKIILGPKKIADVFPFFEGTVFES-GIDAAYRSTRGKEVYLFKG-- 137 (227)
T ss_dssp CSTTEEEEEET---------TEEEEEECCTTTCCCEEEEEEEEHHHHSGGGTTSTTTT-CCSEEEECSSTTEEEEEET--
T ss_pred CCCCEEEEEeC---------CEEEEEeCCCCccccccccCceEHhhhcCCCCCccCCC-cccEEEEECCCCEEEEEEC--
Confidence 36899999977 3689998 321 1122222110011 122222 2689999965
Q ss_pred CCCCCCCeEEEEECCCCceEe-----cC-CCccCc-----CceeEEE---ECCEEEEEeCcccCCCCceeeeeEEEECCC
Q 018336 197 ENKTALSSAWAYDLIKDEWTE-----LA-RMTQER-----DECEAVV---IGSEFWVVSGYKTERQGIFDESAESYQLGT 262 (358)
Q Consensus 197 ~~~~~~~~~~~yd~~t~~W~~-----~~-~~p~~~-----~~~~~~~---~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~ 262 (358)
+..++||..+++-.. +. .+|... ....++. .++++|++-|. .-+.||..+
T Consensus 138 ------~~yw~~d~~~~~~~~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg~----------~Ywr~d~~~ 201 (227)
T 3lp9_A 138 ------DQYARIDYGSNSMVNKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKDD----------HYARVKVTP 201 (227)
T ss_dssp ------TEEEEEETTTTEESSSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEETT----------EEEEEECCS
T ss_pred ------CEEEEEeCCCccccCCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEECC----------EEEEEECCc
Confidence 468899987653221 11 123211 1222333 35899999764 237788776
Q ss_pred C
Q 018336 263 G 263 (358)
Q Consensus 263 ~ 263 (358)
.
T Consensus 202 ~ 202 (227)
T 3lp9_A 202 X 202 (227)
T ss_dssp S
T ss_pred c
Confidence 5
No 272
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=59.95 E-value=63 Score=25.58 Aligned_cols=100 Identities=9% Similarity=0.154 Sum_probs=57.0
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcE---EeCCCCCCCc--eeeeeEEE---CCEEEEEcCcCCCCCCCCeEEEE
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRW---TRGKNMPDNR--SFFAAGEL---NGRVIIAGGHDENKTALSSAWAY 208 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W---~~~~~~~~~~--~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~y 208 (358)
++++|++-| +.+|+|+..+-.- +.|..+..|. ..-.+|.. ++++|++-| +..+.|
T Consensus 79 ~~~iyfFkG---------~~~w~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG--------~~ywr~ 141 (207)
T 1pex_A 79 HDLIFIFRG---------RKFWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSG--------NQVWRY 141 (207)
T ss_dssp TTEEEEEET---------TEEEEESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEET--------TEEEEE
T ss_pred CCcEEEEcc---------CEEEEEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeC--------CEEEEE
Confidence 589999977 3688887432211 2233322222 22333332 489999965 468899
Q ss_pred ECCCCceEe-----c----CCCccCcCceeEEEECCEEEEEeCcccCCCCceeeeeEEEECCCCce
Q 018336 209 DLIKDEWTE-----L----ARMTQERDECEAVVIGSEFWVVSGYKTERQGIFDESAESYQLGTGEW 265 (358)
Q Consensus 209 d~~t~~W~~-----~----~~~p~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W 265 (358)
|..+++-.. + +.+|.. -.++...+|++|++-|. ..++||..+++-
T Consensus 142 d~~~~~~d~gyPr~i~~~~~Gip~~--iDaAf~~~g~~YfFkg~----------~y~rf~~~~~~v 195 (207)
T 1pex_A 142 DDTNHIMDKDYPRLIEEDFPGIGDK--VDAVYEKNGYIYFFNGP----------IQFEYSIWSNRI 195 (207)
T ss_dssp ETTTTEECSSCCCBHHHHSTTSCSC--CSEEEEETTEEEEEETT----------EEEEEETTTTEE
T ss_pred eCcCccccCCCCccHHHcCCCCCCC--ccEEEEcCCcEEEEECC----------EEEEEeCCccEE
Confidence 987653221 1 122221 22344569999999764 346788876653
No 273
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=59.93 E-value=1.2e+02 Score=28.73 Aligned_cols=109 Identities=9% Similarity=-0.058 Sum_probs=50.8
Q ss_pred eEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEECCEEEEEcCcCCCCC--CCcceeEEEECCCCcEEeCCCCCCCc--e
Q 018336 103 GVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASSQGKLVVMGGWDPASY--SPVSHVFVYDFTTRRWTRGKNMPDNR--S 178 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~Gg~~~~~~--~~~~~~~~yd~~t~~W~~~~~~~~~~--~ 178 (358)
.+..+|..+++-..+........ ........+-+++..+++..+.... .....++++|..+.+-+.+....... .
T Consensus 38 ~i~~~d~~~g~~~~~~~~~~~~~-~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~ 116 (723)
T 1xfd_A 38 TVRLWNVETNTSTVLIEGKKIES-LRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKL 116 (723)
T ss_dssp CEEEBCGGGCCCEEEECTTTTTT-TTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCC
T ss_pred CEEEEECCCCcEEEEeccccccc-cccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccc
Confidence 57788888876544432221100 0011122233555444443222111 12368999999988766665433211 1
Q ss_pred eeeeEEECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecC
Q 018336 179 FFAAGELNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELA 219 (358)
Q Consensus 179 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~ 219 (358)
....-.-+++.++++.. ..++++|..++.-..+.
T Consensus 117 ~~~~~SPdG~~la~~~~-------~~i~~~~~~~g~~~~~~ 150 (723)
T 1xfd_A 117 QYAGWGPKGQQLIFIFE-------NNIYYCAHVGKQAIRVV 150 (723)
T ss_dssp SBCCBCSSTTCEEEEET-------TEEEEESSSSSCCEEEE
T ss_pred cccEECCCCCEEEEEEC-------CeEEEEECCCCceEEEe
Confidence 11111123433333221 35777787776655443
No 274
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=59.88 E-value=76 Score=26.54 Aligned_cols=103 Identities=11% Similarity=0.057 Sum_probs=52.2
Q ss_pred cceeEEEECCCCcE-EeCCCCCCCceeeeeEEE-CCEEEEEcCcCCCCC--C-CCeEEEEECCCCceEecCCCccCcCce
Q 018336 154 VSHVFVYDFTTRRW-TRGKNMPDNRSFFAAGEL-NGRVIIAGGHDENKT--A-LSSAWAYDLIKDEWTELARMTQERDEC 228 (358)
Q Consensus 154 ~~~~~~yd~~t~~W-~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~--~-~~~~~~yd~~t~~W~~~~~~p~~~~~~ 228 (358)
...++++|..+++. +.+.. + .....+.. ++ +++.+....... . ...++.+| ++.++.+..- ...
T Consensus 151 ~~~l~~~d~~~~~~~~~l~~-~---~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~----~~~ 219 (347)
T 2gop_A 151 KTTFWIFDTESEEVIEEFEK-P---RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK----VSF 219 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEE-E---TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE----ESE
T ss_pred cceEEEEECCCCeEEeeecC-C---CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCceEEeccC----cce
Confidence 35799999998877 55544 2 11222222 45 555553332111 1 35788888 6777666432 111
Q ss_pred eEEEECCEEEEEeCcccCCCCceeeeeEEEECCCCceEEcC
Q 018336 229 EAVVIGSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRAE 269 (358)
Q Consensus 229 ~~~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~ 269 (358)
....-+|+.+++.+............++.+| ++++..+.
T Consensus 220 ~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~ 258 (347)
T 2gop_A 220 YAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGIL 258 (347)
T ss_dssp EEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESS
T ss_pred eeECCCCCEEEEEEccccCCccccceEEEEC--CCceEecc
Confidence 2225567644443322111111134678888 66666554
No 275
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=59.68 E-value=1.2e+02 Score=28.71 Aligned_cols=105 Identities=10% Similarity=0.154 Sum_probs=51.3
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCC-ceeeeeEEE--CC--EEEEEcCcCCCCCCCCeEEEEECC
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDN-RSFFAAGEL--NG--RVIIAGGHDENKTALSSAWAYDLI 211 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~-~~~~~~~~~--~~--~iyv~GG~~~~~~~~~~~~~yd~~ 211 (358)
++..++.|+.+ ..+.+||.....-..+...... +.....+.. ++ ..++.|+.+ ..+.+||..
T Consensus 483 ~~~~l~s~s~D-------~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d------~~v~vwd~~ 549 (694)
T 3dm0_A 483 DNRQIVSASRD-------RTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWD------KTVKVWNLS 549 (694)
T ss_dssp TSSCEEEEETT-------SCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETT------SCEEEEETT
T ss_pred CCCEEEEEeCC-------CEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCC------CeEEEEECC
Confidence 45555666543 3577888755432222211111 111112222 22 355555544 358999998
Q ss_pred CCceEecCCCccCcCceeEEE--ECCEEEEEeCcccCCCCceeeeeEEEECCCCc
Q 018336 212 KDEWTELARMTQERDECEAVV--IGSEFWVVSGYKTERQGIFDESAESYQLGTGE 264 (358)
Q Consensus 212 t~~W~~~~~~p~~~~~~~~~~--~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~ 264 (358)
+..-... +.........+. -++++++.|+.+ ..|..||..+++
T Consensus 550 ~~~~~~~--~~~h~~~v~~v~~spdg~~l~sg~~D--------g~i~iwd~~~~~ 594 (694)
T 3dm0_A 550 NCKLRST--LAGHTGYVSTVAVSPDGSLCASGGKD--------GVVLLWDLAEGK 594 (694)
T ss_dssp TCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETT--------SBCEEEETTTTE
T ss_pred CCcEEEE--EcCCCCCEEEEEEeCCCCEEEEEeCC--------CeEEEEECCCCc
Confidence 7654321 111111122222 266777777653 356789988764
No 276
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=58.38 E-value=96 Score=27.22 Aligned_cols=131 Identities=7% Similarity=-0.063 Sum_probs=71.1
Q ss_pred eEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEE--CCEEEEEcCcCCCCCCCcceeEEEECCCC----cEEeCCCCCCC
Q 018336 103 GVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASS--QGKLVVMGGWDPASYSPVSHVFVYDFTTR----RWTRGKNMPDN 176 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~--~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~----~W~~~~~~~~~ 176 (358)
.+...|.....+..+..-.. ...+++.. ++.||+.--. ...++++++... ....+.....
T Consensus 93 ~I~~i~l~~~~~~~~~~~~~------~~~~l~~d~~~~~lywsD~~-------~~~I~~~~~~g~~~~~~~~~~~~~~~- 158 (400)
T 3p5b_L 93 EVRKMTLDRSEYTSLIPNLR------NVVALDTEVASNRIYWSDLS-------QRMICSTQLDRAHGVSSYDTVISRDI- 158 (400)
T ss_dssp EEEEECTTSCSCEEEECSCS------CEEEEEEETTTTEEEEEETT-------TTEEEEEEC------CCCEEEECSSC-
T ss_pred eeEEEccCCcceeEeccccC------cceEEeeeeccCceEEEecC-------CCeEEEEEcccCCCCCcceEEEeCCC-
Confidence 67888888877766533211 12234433 6889998542 347888888652 1222211111
Q ss_pred ceeeeeEE--ECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecC--CCccCcCceeEEE--ECCEEEEEeCcccCCCCc
Q 018336 177 RSFFAAGE--LNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELA--RMTQERDECEAVV--IGSEFWVVSGYKTERQGI 250 (358)
Q Consensus 177 ~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~--~~p~~~~~~~~~~--~~~~lyv~gG~~~~~~~~ 250 (358)
..-.++++ .++.||+.-.. ...++++++....-+.+. .+..+ .++++ .++.||+..-..
T Consensus 159 ~~p~glavD~~~~~lY~~d~~------~~~I~~~~~~g~~~~~l~~~~~~~P---~~iavdp~~g~ly~td~~~------ 223 (400)
T 3p5b_L 159 QAPDGLAVDWIHSNIYWTDSV------LGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWGT------ 223 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETT------TTEEEEECTTTCSEEEEEECSSCCE---EEEEEETTTTEEEEEECSS------
T ss_pred CCcccEEEEecCCceEEEECC------CCeEEEEeCCCCceEEEEeCCCCCc---ceEEEecccCeEEEEeCCC------
Confidence 11223444 37899998432 357899999876554443 22222 12333 367899885211
Q ss_pred eeeeeEEEECCCC
Q 018336 251 FDESAESYQLGTG 263 (358)
Q Consensus 251 ~~~~i~~yd~~~~ 263 (358)
...|++++++..
T Consensus 224 -~~~I~~~~~dG~ 235 (400)
T 3p5b_L 224 -PAKIKKGGLNGV 235 (400)
T ss_dssp -SCCEEEEETTSC
T ss_pred -CCEEEEEeCCCC
Confidence 246788888754
No 277
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=57.97 E-value=94 Score=26.98 Aligned_cols=71 Identities=10% Similarity=0.070 Sum_probs=39.5
Q ss_pred CCEEEEEcCcCC---CCCCCCeEEEEECCCCce-EecCCCccCcCcee-EEEECCE-EEEEeCcccCCCCceeeeeEEEE
Q 018336 186 NGRVIIAGGHDE---NKTALSSAWAYDLIKDEW-TELARMTQERDECE-AVVIGSE-FWVVSGYKTERQGIFDESAESYQ 259 (358)
Q Consensus 186 ~~~iyv~GG~~~---~~~~~~~~~~yd~~t~~W-~~~~~~p~~~~~~~-~~~~~~~-lyv~gG~~~~~~~~~~~~i~~yd 259 (358)
++.+|+...... ++...+.+.++|..+.+- .++ +.+..... .+.-+|+ +++++... .+.+.++|
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i---~~g~~p~~i~~s~Dg~~~l~v~~~~-------~~~V~ViD 347 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQI---SLGHDVDAISVAQDGGPDLYALSAG-------TEVLHIYD 347 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEE---ECCCCcCeEEECCCCCeEEEEEcCC-------CCeEEEEE
Confidence 578999754211 112346899999988754 333 22222222 3344566 44444321 35788999
Q ss_pred CCCCceE
Q 018336 260 LGTGEWK 266 (358)
Q Consensus 260 ~~~~~W~ 266 (358)
..+.+=.
T Consensus 348 ~~t~~vv 354 (373)
T 2mad_H 348 AGAGDQD 354 (373)
T ss_pred CCCCCEE
Confidence 9887644
No 278
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=57.60 E-value=78 Score=31.92 Aligned_cols=57 Identities=16% Similarity=0.060 Sum_probs=33.5
Q ss_pred CeEE-EEECCCCceEecCCCccCcCceeEE-EECCEEEEEeCcccCCCCceeeeeEEEECCCCceEEcC
Q 018336 203 SSAW-AYDLIKDEWTELARMTQERDECEAV-VIGSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRAE 269 (358)
Q Consensus 203 ~~~~-~yd~~t~~W~~~~~~p~~~~~~~~~-~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~ 269 (358)
..++ +||..++.-+.+. .........+ .-+|+.++++.. ...+..||+.+++-..+.
T Consensus 358 ~~l~~~~d~~~~~~~~l~--~~~~~~~~~~~SpDG~~la~~~~--------~~~v~~~d~~tg~~~~~~ 416 (1045)
T 1k32_A 358 GDFLGIYDYRTGKAEKFE--ENLGNVFAMGVDRNGKFAVVAND--------RFEIMTVDLETGKPTVIE 416 (1045)
T ss_dssp EEEEEEEETTTCCEEECC--CCCCSEEEEEECTTSSEEEEEET--------TSEEEEEETTTCCEEEEE
T ss_pred CceEEEEECCCCCceEec--CCccceeeeEECCCCCEEEEECC--------CCeEEEEECCCCceEEec
Confidence 4688 8999887766655 1111111222 336666665543 236789999988765543
No 279
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=57.23 E-value=1.4e+02 Score=28.80 Aligned_cols=98 Identities=7% Similarity=-0.002 Sum_probs=52.7
Q ss_pred cceeEEEECCCC--cE--EeCCCCCCCceeeeeE-EECCEEEEEcCcCCCCCCCCeEEEEECCC-CceEe-cCCCccCcC
Q 018336 154 VSHVFVYDFTTR--RW--TRGKNMPDNRSFFAAG-ELNGRVIIAGGHDENKTALSSAWAYDLIK-DEWTE-LARMTQERD 226 (358)
Q Consensus 154 ~~~~~~yd~~t~--~W--~~~~~~~~~~~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~yd~~t-~~W~~-~~~~p~~~~ 226 (358)
.++++++|..+. .+ +.+.+-... ..+... ..++.+|+..-.+. .....++.+|..+ ..|+. +-+......
T Consensus 294 ~~~l~~~d~~~~~~~~~~~~l~~~~~~-~~~s~~~~~g~~l~~~t~~~~--a~~~~L~~~d~~~~~~~~~~li~~~~~~~ 370 (751)
T 2xe4_A 294 TAEVHLLDLRKGNAHNTLEIVRPREKG-VRYDVQMHGTSHLVILTNEGG--AVNHKLLIAPRGQPSDWSHVLVDHSEDVF 370 (751)
T ss_dssp CEEEEEEESSSCTTCCCEEESSCCCTT-CCEEEEEETTTEEEEEECTTT--CTTCEEEEEETTSTTCCCCEEECCCSSEE
T ss_pred CceEEEEECCCCCCCceeEEeecCCCC-ceEEEeeeeCCEEEEEeCCCC--CCCcEEEEEcCCCcccceeeEECCCCCcE
Confidence 457888998765 45 555332111 112222 23778888854431 1235789999876 67876 432211111
Q ss_pred ceeEEEECCEEEEEeCcccCCCCceeeeeEEEEC
Q 018336 227 ECEAVVIGSEFWVVSGYKTERQGIFDESAESYQL 260 (358)
Q Consensus 227 ~~~~~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~ 260 (358)
.......++.|++.....+ ...++++|+
T Consensus 371 l~~~~~~~~~lv~~~~~~g------~~~l~~~dl 398 (751)
T 2xe4_A 371 MESIAVRSNYLVVAGRRAG------LTRIWTMMA 398 (751)
T ss_dssp EEEEEECSSEEEEEEEETT------EEEEEEEEC
T ss_pred EEEEEEECCEEEEEEEeCC------EEEEEEEec
Confidence 1223344666776653321 457788886
No 280
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=56.56 E-value=1.5e+02 Score=28.72 Aligned_cols=151 Identities=12% Similarity=0.112 Sum_probs=76.9
Q ss_pred cceEEEEeCCCC--Ce--eecCCCCCCCCCCCceeEEE-EECCEEEEEcCcCCCCCCCcceeEEEECCC-CcEEe-CCCC
Q 018336 101 SYGVTVFDPVSL--TW--DRLGPVPEYPAGLPLFCQVA-SSQGKLVVMGGWDPASYSPVSHVFVYDFTT-RRWTR-GKNM 173 (358)
Q Consensus 101 ~~~~~~~d~~~~--~W--~~~~~~~~~~~~~~~~~~~~-~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t-~~W~~-~~~~ 173 (358)
...++.+|..+. .+ ..+.+-.. . ..+ ... ..++.||+....++. ....++++|..+ ..|+. +-+-
T Consensus 294 ~~~l~~~d~~~~~~~~~~~~l~~~~~---~-~~~-s~~~~~g~~l~~~t~~~~a---~~~~L~~~d~~~~~~~~~~li~~ 365 (751)
T 2xe4_A 294 TAEVHLLDLRKGNAHNTLEIVRPREK---G-VRY-DVQMHGTSHLVILTNEGGA---VNHKLLIAPRGQPSDWSHVLVDH 365 (751)
T ss_dssp CEEEEEEESSSCTTCCCEEESSCCCT---T-CCE-EEEEETTTEEEEEECTTTC---TTCEEEEEETTSTTCCCCEEECC
T ss_pred CceEEEEECCCCCCCceeEEeecCCC---C-ceE-EEeeeeCCEEEEEeCCCCC---CCcEEEEEcCCCcccceeeEECC
Confidence 356788888765 45 55533221 1 112 222 337788888654311 134799999876 67876 4221
Q ss_pred CCCceeeeeEEECCEEEEEcCcCCCCCCCCeEEEEEC-------CCCc-eEecCCCccCcCceeEE-----EECCE-EEE
Q 018336 174 PDNRSFFAAGELNGRVIIAGGHDENKTALSSAWAYDL-------IKDE-WTELARMTQERDECEAV-----VIGSE-FWV 239 (358)
Q Consensus 174 ~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~-------~t~~-W~~~~~~p~~~~~~~~~-----~~~~~-lyv 239 (358)
.....-......++.|++....+. ...++++|+ .++. -+.+. ++......... ..++. +++
T Consensus 366 ~~~~~l~~~~~~~~~lv~~~~~~g----~~~l~~~dl~~~~~~~~~g~~~~~l~-l~~~~~~~~~~~~~~~~~~~~~l~~ 440 (751)
T 2xe4_A 366 SEDVFMESIAVRSNYLVVAGRRAG----LTRIWTMMADSQDGVFKAGTGLREVV-MEEPIFTVHLVESQMLEYEEPTFRM 440 (751)
T ss_dssp CSSEEEEEEEECSSEEEEEEEETT----EEEEEEEECCTTTSCCCTTTCCEECC-CCCSSCEEEECGGGCCCTTCSCEEE
T ss_pred CCCcEEEEEEEECCEEEEEEEeCC----EEEEEEEecccccccccCCccceEEC-CCCceeEEEeccCcccCCCCCEEEE
Confidence 211121223334677777653322 367888996 3444 44443 33221111110 11333 333
Q ss_pred E-eCcccCCCCceeeeeEEEECCCCceEEcCC
Q 018336 240 V-SGYKTERQGIFDESAESYQLGTGEWKRAEN 270 (358)
Q Consensus 240 ~-gG~~~~~~~~~~~~i~~yd~~~~~W~~~~~ 270 (358)
. .+. . ....++.||+.+++.+.+..
T Consensus 441 ~~ss~--~----~P~~~~~~d~~~~~~~~l~~ 466 (751)
T 2xe4_A 441 EYSSL--A----TPNTWFDVSPQDHSRTAVKV 466 (751)
T ss_dssp EEEET--T----EEEEEEEECTTTCCEEEEEE
T ss_pred EEeCC--C----CCCEEEEEECCCCcEEEEec
Confidence 3 222 1 25578899999888776653
No 281
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=55.88 E-value=1e+02 Score=29.12 Aligned_cols=61 Identities=10% Similarity=-0.082 Sum_probs=32.9
Q ss_pred eEEEEECCCCce-EecCCCccC---cCcee--EEEECCEEEEEeCcccCCCCceeeeeEEEECCCCceEEc
Q 018336 204 SAWAYDLIKDEW-TELARMTQE---RDECE--AVVIGSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRA 268 (358)
Q Consensus 204 ~~~~yd~~t~~W-~~~~~~p~~---~~~~~--~~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~ 268 (358)
.++++|..+++- ..+...... ..... ...-||+++++...... ....++.+|+.+++...+
T Consensus 229 ~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~----~~~~i~~~d~~~g~~~~~ 295 (723)
T 1xfd_A 229 SLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQ----NVSILTLCDATTGVCTKK 295 (723)
T ss_dssp EEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTS----CEEEEEEEETTTCCEEEE
T ss_pred EEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCC----CeEEEEEEeCCCCcceEE
Confidence 788899987763 444422110 11111 12337776555433211 145788899988876544
No 282
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=55.15 E-value=1.1e+02 Score=26.74 Aligned_cols=102 Identities=8% Similarity=0.107 Sum_probs=57.9
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCc--E-EeCCCC--CCCceeeeeEE-E--CCEEEEEcCcCCCCCCCCeEEEE
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRR--W-TRGKNM--PDNRSFFAAGE-L--NGRVIIAGGHDENKTALSSAWAY 208 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~--W-~~~~~~--~~~~~~~~~~~-~--~~~iyv~GG~~~~~~~~~~~~~y 208 (358)
++++|++-| +.+|+|+..... + +.+..+ |.....-.+|. . ++++|++-| +..+.|
T Consensus 236 ~g~~~fFkg---------~~yWr~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG--------~~yw~y 298 (365)
T 3ba0_A 236 RNQVFLFKD---------DKYWLISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVD--------NQYWRY 298 (365)
T ss_dssp GTEEEEEET---------TEEEECSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEET--------TEEEEE
T ss_pred CCEEEEEeC---------CEEEEEcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEEC--------CEEEEE
Confidence 789999976 368888754321 1 123322 22111222333 2 579999954 468899
Q ss_pred ECCCCceEe-----c----CCCccCcCceeEEEE-CCEEEEEeCcccCCCCceeeeeEEEECCCCceEE
Q 018336 209 DLIKDEWTE-----L----ARMTQERDECEAVVI-GSEFWVVSGYKTERQGIFDESAESYQLGTGEWKR 267 (358)
Q Consensus 209 d~~t~~W~~-----~----~~~p~~~~~~~~~~~-~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~ 267 (358)
|..+++-.. + +.+|. .-.+++.. ++++|++-|. ..++||..+.+-..
T Consensus 299 d~~~~~v~~gyPk~I~~~f~g~p~--~iDaA~~~~~g~~YfFkg~----------~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 299 DERRQMMDPGYPKLITKNFQGIGP--KIDAVFYSKNKYYYFFQGS----------NQFEYDFLLQRITK 355 (365)
T ss_dssp ETTTTEECSSCCCCHHHHSTTCCS--SCSEEEEETTTEEEEEETT----------EEEEEETTTTEEEE
T ss_pred eCCcceecCCCCcchhhcCCCCCC--ccceeeEecCCcEEEEeCC----------EEEEEECCccEEec
Confidence 987654321 1 11221 12234445 8999999764 35788888776544
No 283
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=54.62 E-value=1.2e+02 Score=27.34 Aligned_cols=119 Identities=13% Similarity=0.104 Sum_probs=57.9
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCC----cEEe-CC--CC--CCCc-eeeeeEE-ECCEEEEEcCcCCCCCCCCeE
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTR----RWTR-GK--NM--PDNR-SFFAAGE-LNGRVIIAGGHDENKTALSSA 205 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~----~W~~-~~--~~--~~~~-~~~~~~~-~~~~iyv~GG~~~~~~~~~~~ 205 (358)
..++|+-|.. .+.++++|..++ +-.+ +. .+ +... .-|+... -++ |||..--+..++....+
T Consensus 95 r~~l~v~~l~-------s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v 166 (462)
T 2ece_A 95 RRFLIVPGLR-------SSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGI 166 (462)
T ss_dssp SCEEEEEBTT-------TCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEE
T ss_pred CCEEEEccCC-------CCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeE
Confidence 4567777653 468999998876 3222 21 01 1111 2233333 356 77643222223345789
Q ss_pred EEEECCCCceEecCCCccC--cCceeEE-EECCEEEEEe----------CcccCC-CCceeeeeEEEECCCC
Q 018336 206 WAYDLIKDEWTELARMTQE--RDECEAV-VIGSEFWVVS----------GYKTER-QGIFDESAESYQLGTG 263 (358)
Q Consensus 206 ~~yd~~t~~W~~~~~~p~~--~~~~~~~-~~~~~lyv~g----------G~~~~~-~~~~~~~i~~yd~~~~ 263 (358)
.++|.+|.+=..--+.... ...+... .-++++++.. |+.... .+.+.+.|.+||..++
T Consensus 167 ~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~ 238 (462)
T 2ece_A 167 LMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR 238 (462)
T ss_dssp EEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT
T ss_pred EEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCC
Confidence 9999998653321111111 1122222 2244444443 111110 0034678999999976
No 284
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=54.52 E-value=89 Score=25.65 Aligned_cols=107 Identities=17% Similarity=0.245 Sum_probs=52.5
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCC--cEEeCCCCCCCcee-eeeEEE---CCEEEEEcCcCCCCCCCCeEEEEEC
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTR--RWTRGKNMPDNRSF-FAAGEL---NGRVIIAGGHDENKTALSSAWAYDL 210 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~--~W~~~~~~~~~~~~-~~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~ 210 (358)
++.+++.|+.+ ..+.+||..+. .++.+..+...... .+++.. ++.+++.|+.+. .+.+||.
T Consensus 22 ~~~~l~~~~~d-------g~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg------~v~vwd~ 88 (351)
T 3f3f_A 22 YGRHVATCSSD-------QHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDK------TVKLWEE 88 (351)
T ss_dssp SSSEEEEEETT-------SEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTS------CEEEEEE
T ss_pred CCCEEEEeeCC-------CeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCC------eEEEEec
Confidence 45556666532 36777777643 33333222211111 122222 366777776543 4888888
Q ss_pred CCC-------ceEecCCCccCcCceeEEEE--C--CEEEEEeCcccCCCCceeeeeEEEECCCCc
Q 018336 211 IKD-------EWTELARMTQERDECEAVVI--G--SEFWVVSGYKTERQGIFDESAESYQLGTGE 264 (358)
Q Consensus 211 ~t~-------~W~~~~~~p~~~~~~~~~~~--~--~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~ 264 (358)
.++ .|+.+..+.........+.+ + +.+++.|+.+ ..+..||..+.+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d--------g~v~iwd~~~~~ 145 (351)
T 3f3f_A 89 DPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGND--------GILRLYDALEPS 145 (351)
T ss_dssp CTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT--------CEEEEEECSSTT
T ss_pred CCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCC--------CcEEEecCCChH
Confidence 664 23433323222222222333 2 5666666542 357888887653
No 285
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=54.01 E-value=1e+02 Score=26.24 Aligned_cols=16 Identities=0% Similarity=-0.153 Sum_probs=11.5
Q ss_pred ceeEEEECC-CCcEEeC
Q 018336 155 SHVFVYDFT-TRRWTRG 170 (358)
Q Consensus 155 ~~~~~yd~~-t~~W~~~ 170 (358)
+.+++||.. +.+...+
T Consensus 167 ~~v~~~~~~~~g~~~~~ 183 (365)
T 1jof_A 167 NKLWTHRKLASGEVELV 183 (365)
T ss_dssp TEEEEEEECTTSCEEEE
T ss_pred CEEEEEEECCCCCEEEe
Confidence 479999987 6766543
No 286
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=53.22 E-value=99 Score=25.78 Aligned_cols=101 Identities=15% Similarity=0.079 Sum_probs=52.5
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEE---ECCEEEEEcCcCCCCCCCCeEEEEECCCC
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGE---LNGRVIIAGGHDENKTALSSAWAYDLIKD 213 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~---~~~~iyv~GG~~~~~~~~~~~~~yd~~t~ 213 (358)
++..++.|+.+ ..+.+||..+.+...+.....+. .+++. -++.+++.|+.+ ..+.+||..++
T Consensus 97 ~~~~l~s~~~d-------g~v~iwd~~~~~~~~~~~~~~~v--~~~~~~~~~~~~~l~~~~~d------g~i~vwd~~~~ 161 (368)
T 3mmy_A 97 DGSKVFTASCD-------KTAKMWDLSSNQAIQIAQHDAPV--KTIHWIKAPNYSCVMTGSWD------KTLKFWDTRSS 161 (368)
T ss_dssp TSSEEEEEETT-------SEEEEEETTTTEEEEEEECSSCE--EEEEEEECSSCEEEEEEETT------SEEEEECSSCS
T ss_pred CCCEEEEEcCC-------CcEEEEEcCCCCceeeccccCce--EEEEEEeCCCCCEEEEccCC------CcEEEEECCCC
Confidence 45556666532 37899999888765532222211 12222 256677776654 35899998776
Q ss_pred ceEecCCCccCcCceeEEEECCEEEEEeCcccCCCCceeeeeEEEECCCC
Q 018336 214 EWTELARMTQERDECEAVVIGSEFWVVSGYKTERQGIFDESAESYQLGTG 263 (358)
Q Consensus 214 ~W~~~~~~p~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~ 263 (358)
+-... +.............+.+++.++ ...+..||....
T Consensus 162 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~---------~~~i~~~~~~~~ 200 (368)
T 3mmy_A 162 NPMMV--LQLPERCYCADVIYPMAVVATA---------ERGLIVYQLENQ 200 (368)
T ss_dssp SCSEE--EECSSCEEEEEEETTEEEEEEG---------GGCEEEEECSSS
T ss_pred cEEEE--EecCCCceEEEecCCeeEEEeC---------CCcEEEEEeccc
Confidence 42211 1111122223344554444432 234677887754
No 287
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=52.70 E-value=1.7e+02 Score=28.25 Aligned_cols=87 Identities=14% Similarity=0.202 Sum_probs=51.9
Q ss_pred eEEEECCCCcEEeCCCCCCCceeeeeEEE-CCEEEEEcCcCCC---CCCCCeEEEEECCCCceEecCCCccC----cCce
Q 018336 157 VFVYDFTTRRWTRGKNMPDNRSFFAAGEL-NGRVIIAGGHDEN---KTALSSAWAYDLIKDEWTELARMTQE----RDEC 228 (358)
Q Consensus 157 ~~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~---~~~~~~~~~yd~~t~~W~~~~~~p~~----~~~~ 228 (358)
+++=.-.-.+|+.+..+|.....+.++.. ++.+|+..+-... ......++.++-...+|+.+.+.|.. +...
T Consensus 224 v~~S~DgG~tW~~~~~~p~~~~~~~~~~~~~~~l~~~~~d~~g~y~~~~~g~v~~s~d~G~tW~~i~~~~~~~~~~~~~~ 303 (737)
T 2cn3_A 224 IYRSTDGGVTWKAVPGQPKGLLPHHGVLASNGMLYITYGDTCGPYDGNGKGQVWKFNTRTGEWIDITPIPYSSSDNRFCF 303 (737)
T ss_dssp EEEESSTTSCCEECTTCCCSSEEEEEEECTTSEEEEEEESSCCSSCCSCCEEEEEEETTTCCEEECCSSCTTSTTCCSEE
T ss_pred EEEEcCCCCceEECCCCCCcccceEEEECCCCeEEEEecCCCCccccccCceEEEEeCCCCCEEEccCCCCCCccccccc
Confidence 44433334689998877765444444432 6889987542210 11235788999999999998876542 3333
Q ss_pred eEEEEC----CEEEEEeCc
Q 018336 229 EAVVIG----SEFWVVSGY 243 (358)
Q Consensus 229 ~~~~~~----~~lyv~gG~ 243 (358)
..+.++ +.||+.+..
T Consensus 304 ~~i~v~p~~~~~ly~~~~~ 322 (737)
T 2cn3_A 304 AGLAVDRQNPDIIMVTSMN 322 (737)
T ss_dssp EEEEECTTCTTCEEEEEEC
T ss_pred ccEEEcCCCCCEEEEEecc
Confidence 334442 568887643
No 288
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=52.30 E-value=1.3e+02 Score=27.02 Aligned_cols=101 Identities=11% Similarity=0.155 Sum_probs=55.8
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCc--E-EeCC---CCCCCceeeeeEE-E--CCEEEEEcCcCCCCCCCCeEEE
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRR--W-TRGK---NMPDNRSFFAAGE-L--NGRVIIAGGHDENKTALSSAWA 207 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~--W-~~~~---~~~~~~~~~~~~~-~--~~~iyv~GG~~~~~~~~~~~~~ 207 (358)
++++|++-| +.+|+|+..+-. + +.+. -+|.....-.+|. . ++++|++-| +..+.
T Consensus 318 ~g~~~fFKg---------~~~W~~~~~~~~~gyP~~i~~~~g~P~~~~~IDAA~~~~~~~k~yfFkG--------~~yw~ 380 (450)
T 1su3_A 318 RDEVRFFKG---------NKYWAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVA--------NKYWR 380 (450)
T ss_dssp GTEEEEEET---------TEEEEEETTEECTTCSEEHHHHHCCCTTCCCCCEEEEETTTTEEEEEET--------TEEEE
T ss_pred CCeEEEEeC---------CEEEEecCCcccCCCceeeehhhcCCCCCCccceEEEEcCCCeEEEEeC--------CEEEE
Confidence 689999976 368888753210 0 0111 1121111222232 2 589999955 46899
Q ss_pred EECCCCceEe-----c----CCCccCcCceeEEEECCEEEEEeCcccCCCCceeeeeEEEECCCCceE
Q 018336 208 YDLIKDEWTE-----L----ARMTQERDECEAVVIGSEFWVVSGYKTERQGIFDESAESYQLGTGEWK 266 (358)
Q Consensus 208 yd~~t~~W~~-----~----~~~p~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~ 266 (358)
||..+++-.. + +.+|.. --+++..++++|++-|. ..++||..+.+-.
T Consensus 381 yd~~~~~~~~gYPk~I~~~fpgip~~--iDAA~~~~g~~YFFkg~----------~ywr~d~~~~~v~ 436 (450)
T 1su3_A 381 YDEYKRSMDPGYPKMIAHDFPGIGHK--VDAVFMKDGFFYFFHGT----------RQYKFDPKTKRIL 436 (450)
T ss_dssp EETTTTEECSSCSEEHHHHSTTSCSC--CSEEEEETTEEEEEETT----------EEEEEETTTTEEE
T ss_pred EeCCCccccCCCCcchhhcCCCCCCC--ccEEEEcCCeEEEEeCC----------EEEEEECCcceEe
Confidence 9987543221 1 122222 22444578999999764 3478888776544
No 289
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=49.10 E-value=1.2e+02 Score=25.57 Aligned_cols=132 Identities=10% Similarity=0.177 Sum_probs=65.0
Q ss_pred CCCCeeecCCCCCCCCCCCceeEEE-EECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEEE-CC
Q 018336 110 VSLTWDRLGPVPEYPAGLPLFCQVA-SSQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGEL-NG 187 (358)
Q Consensus 110 ~~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~~ 187 (358)
.-.+|..+......+. ..+ .++ .-++.+|+.+.. ..+++-.-.-.+|+.+.... +...+.++.. ++
T Consensus 107 gG~tW~~~~~~~~~~~--~~~-~i~~~~~~~~~~~~~~--------g~v~~S~DgG~tW~~~~~~~-~~~~~~~~~~~~~ 174 (327)
T 2xbg_A 107 GGQSWSQIPLDPKLPG--SPR-LIKALGNGSAEMITNV--------GAIYRTKDSGKNWQALVQEA-IGVMRNLNRSPSG 174 (327)
T ss_dssp TTSSCEECCCCTTCSS--CEE-EEEEEETTEEEEEETT--------CCEEEESSTTSSEEEEECSC-CCCEEEEEECTTS
T ss_pred CCCCceECccccCCCC--CeE-EEEEECCCCEEEEeCC--------ccEEEEcCCCCCCEEeecCC-CcceEEEEEcCCC
Confidence 3468988764321111 112 333 346788887741 13555444456898875422 2222333333 46
Q ss_pred EEEEEcCcCCCCCCCCeEEEEE-CCCCceEecCCCccCcCceeEEE-ECCEEEEEeCcccCCCCceeeeeEEEECC-CCc
Q 018336 188 RVIIAGGHDENKTALSSAWAYD-LIKDEWTELARMTQERDECEAVV-IGSEFWVVSGYKTERQGIFDESAESYQLG-TGE 264 (358)
Q Consensus 188 ~iyv~GG~~~~~~~~~~~~~yd-~~t~~W~~~~~~p~~~~~~~~~~-~~~~lyv~gG~~~~~~~~~~~~i~~yd~~-~~~ 264 (358)
.+|++|.. ..++.-+ ..-.+|+.+... .......++. -++.+|+.+.. + .+...+.. ..+
T Consensus 175 ~~~~~g~~-------G~~~~S~d~gG~tW~~~~~~-~~~~~~~~~~~~~g~~~~~~~~-----G----~~~~s~~D~G~t 237 (327)
T 2xbg_A 175 EYVAVSSR-------GSFYSTWEPGQTAWEPHNRT-TSRRLHNMGFTPDGRLWMIVNG-----G----KIAFSDPDNSEN 237 (327)
T ss_dssp CEEEEETT-------SSEEEEECTTCSSCEEEECC-SSSCEEEEEECTTSCEEEEETT-----T----EEEEEETTEEEE
T ss_pred cEEEEECC-------CcEEEEeCCCCCceeECCCC-CCCccceeEECCCCCEEEEeCC-----c----eEEEecCCCCCe
Confidence 66666521 1244433 235789987532 2222233332 36678877632 1 23333333 457
Q ss_pred eEEcCC
Q 018336 265 WKRAEN 270 (358)
Q Consensus 265 W~~~~~ 270 (358)
|+.+..
T Consensus 238 W~~~~~ 243 (327)
T 2xbg_A 238 WGELLS 243 (327)
T ss_dssp ECCCBC
T ss_pred eEeccC
Confidence 887653
No 290
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=48.20 E-value=1.8e+02 Score=27.40 Aligned_cols=32 Identities=0% Similarity=-0.167 Sum_probs=20.9
Q ss_pred eEEEEeCCeEEEECCCCCCCCceEEEEECCCCceEe
Q 018336 304 TCRVELGGCTLVTGSGYQGGPQEFYVVEGRNGKFRK 339 (358)
Q Consensus 304 ~~~~~~~~~i~v~gG~~~~~~~~i~~yd~~~~~W~~ 339 (358)
.+++...+..+++++.. ..|.+||..+++-..
T Consensus 606 ~~~~~sp~~~~l~~~~~----~~i~iwd~~~~~~~~ 637 (694)
T 3dm0_A 606 HALCFSPNRYWLCAATE----HGIKIWDLESKSIVE 637 (694)
T ss_dssp EEEEECSSSSEEEEEET----TEEEEEETTTTEEEE
T ss_pred EEEEEcCCCcEEEEEcC----CCEEEEECCCCCChh
Confidence 44555556666666654 788888888776644
No 291
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=47.88 E-value=1.1e+02 Score=27.28 Aligned_cols=133 Identities=8% Similarity=0.029 Sum_probs=66.7
Q ss_pred ceEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEE--CCEEEEEcCcCCCCCCCcceeEEEECCCCcEE---eCCCCCCC
Q 018336 102 YGVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASS--QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWT---RGKNMPDN 176 (358)
Q Consensus 102 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~--~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~---~~~~~~~~ 176 (358)
..+..+|+..+....+..... ...+++.. ++.||+.....+. ....+..++... .+. .++.+..
T Consensus 159 ~~I~~id~~~~~v~~~~~~~~------~P~~ia~d~~G~~lyvad~~~~~---~~~~v~~~~~~g-~~~~~~~l~~~~~- 227 (430)
T 3tc9_A 159 HPTRLIDFEKEYVSTVYSGLS------KVRTICWTHEADSMIITNDQNNN---DRPNNYILTRES-GFKVITELTKGQN- 227 (430)
T ss_dssp EEEEEEETTTTEEEEEECCCS------CEEEEEECTTSSEEEEEECCSCT---TSEEEEEEEGGG-TSCSEEEEEECSS-
T ss_pred CcEEEEECCCCEEEEEecCCC------CcceEEEeCCCCEEEEEeCCCCc---ccceEEEEeCCC-ceeeeeeeccCCC-
Confidence 367888988877766543111 11233332 3459998653321 123466676543 232 2222222
Q ss_pred ceeeeeEEE--CCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEE-ECCE-EEEEeCcccCCCCcee
Q 018336 177 RSFFAAGEL--NGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVV-IGSE-FWVVSGYKTERQGIFD 252 (358)
Q Consensus 177 ~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~-~~~~-lyv~gG~~~~~~~~~~ 252 (358)
.+++++. ++.||+.-- ....+++|++.+..-..+...+.......+++ -+++ ||+.... .
T Consensus 228 --p~giavdp~~g~lyv~d~------~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~--------~ 291 (430)
T 3tc9_A 228 --CNGAETHPINGELYFNSW------NAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVN--------Q 291 (430)
T ss_dssp --CCCEEECTTTCCEEEEET------TTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETT--------T
T ss_pred --ceEEEEeCCCCEEEEEEC------CCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECC--------C
Confidence 2233332 678998732 13579999998765533332222111112332 2455 8888532 2
Q ss_pred eeeEEEECC
Q 018336 253 ESAESYQLG 261 (358)
Q Consensus 253 ~~i~~yd~~ 261 (358)
..|.+|+..
T Consensus 292 ~~I~~~~~d 300 (430)
T 3tc9_A 292 HYILRSDYD 300 (430)
T ss_dssp TEEEEEEEE
T ss_pred CEEEEEeCC
Confidence 355665544
No 292
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=46.47 E-value=1.5e+02 Score=25.77 Aligned_cols=22 Identities=18% Similarity=0.163 Sum_probs=16.4
Q ss_pred eEEEECCCCCCCCceEEEEECCCCce
Q 018336 312 CTLVTGSGYQGGPQEFYVVEGRNGKF 337 (358)
Q Consensus 312 ~i~v~gG~~~~~~~~i~~yd~~~~~W 337 (358)
++++.|+.+ ..|.+||..+.+-
T Consensus 240 ~~l~s~~~d----g~i~iwd~~~~~~ 261 (447)
T 3dw8_B 240 NTFVYSSSK----GTIRLCDMRASAL 261 (447)
T ss_dssp TEEEEEETT----SCEEEEETTTCSS
T ss_pred cEEEEEeCC----CeEEEEECcCCcc
Confidence 677777765 5788899887663
No 293
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=46.09 E-value=52 Score=28.44 Aligned_cols=26 Identities=4% Similarity=-0.010 Sum_probs=16.8
Q ss_pred CCEEEEEcCcCCCCCCCCeEEEEECCCCceE
Q 018336 186 NGRVIIAGGHDENKTALSSAWAYDLIKDEWT 216 (358)
Q Consensus 186 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~ 216 (358)
++.+|++.... -..++.|+..++.|+
T Consensus 55 ~~~~~vv~p~~-----dG~l~a~~~~~G~~~ 80 (339)
T 2be1_A 55 TYETLIIEPFG-----DGNIYYFNAHQGLQK 80 (339)
T ss_dssp SSEEEEECCST-----TTEEEEEETTTEEEE
T ss_pred CCcEEEEEECC-----CCEEEEEECCCCcEE
Confidence 45677664222 246899999887765
No 294
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=45.06 E-value=1.6e+02 Score=25.84 Aligned_cols=82 Identities=11% Similarity=0.018 Sum_probs=45.6
Q ss_pred CCEEEEEe-CcccCCC---C---ceeeeeEEEECCCC--ceEEcCCccccCCCCCceeeeeecCccCceeccccceeece
Q 018336 234 GSEFWVVS-GYKTERQ---G---IFDESAESYQLGTG--EWKRAENAWKLSQCPRSNVGVGREGKLFCWAETEAAVQFGT 304 (358)
Q Consensus 234 ~~~lyv~g-G~~~~~~---~---~~~~~i~~yd~~~~--~W~~~~~~p~~~~~~~~~~~~~~d~~~~~W~~lp~~~r~~~ 304 (358)
.|+|+|+- |...... - ....++.+||+.++ +=.+.-.+|.....+.+...-
T Consensus 97 ~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~d-------------------- 156 (381)
T 3q6k_A 97 CRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGG-------------------- 156 (381)
T ss_dssp TCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEE--------------------
T ss_pred CCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccce--------------------
Confidence 47788885 4322100 0 12457899999999 655444454332122222111
Q ss_pred EEEEe---------CCeEEEECCCCCCCCceEEEEECCCCc-eEee
Q 018336 305 CRVEL---------GGCTLVTGSGYQGGPQEFYVVEGRNGK-FRKF 340 (358)
Q Consensus 305 ~~~~~---------~~~i~v~gG~~~~~~~~i~~yd~~~~~-W~~~ 340 (358)
+++- ++.+||.--. ...+.+||..+++ |+.+
T Consensus 157 -i~VD~~~~~~~c~~~~aYItD~~----~~gLIVydl~~~~swRv~ 197 (381)
T 3q6k_A 157 -FAVDVANPKGDCSETFVYITNFL----RGALFIYDHKKQDSWNVT 197 (381)
T ss_dssp -EEEEESCTTTTSCSEEEEEEETT----TTEEEEEETTTTEEEEEE
T ss_pred -EEEecccCCCCCCccEEEEEcCC----CCcEEEEECCCCcEEEEc
Confidence 1211 3556765321 1699999999877 8876
No 295
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=45.02 E-value=49 Score=28.59 Aligned_cols=55 Identities=13% Similarity=0.120 Sum_probs=29.3
Q ss_pred CeEEEEECCCC--ceEecCC--Ccc--CcCceeEEEECCEEEEEeCcccCCCCceeeeeEEEECCCCceE
Q 018336 203 SSAWAYDLIKD--EWTELAR--MTQ--ERDECEAVVIGSEFWVVSGYKTERQGIFDESAESYQLGTGEWK 266 (358)
Q Consensus 203 ~~~~~yd~~t~--~W~~~~~--~p~--~~~~~~~~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~ 266 (358)
..++.+|.+++ .|+.-.. .|. .+.. ....++.+|++.... -..++.||..++.|.
T Consensus 20 G~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~--~~~~~~~~~vv~p~~-------dG~l~a~~~~~G~~~ 80 (339)
T 2be1_A 20 GGLHAVDRRNGHIIWSIEPENFQPLIEIQEP--SRLETYETLIIEPFG-------DGNIYYFNAHQGLQK 80 (339)
T ss_dssp SCEEEEETTTTEEEEEECGGGSCCSEECCCS--CTTTSSEEEEECCST-------TTEEEEEETTTEEEE
T ss_pred CeEEEEECCCCcEEEEecCCccCCcEEecCC--ccccCCcEEEEEECC-------CCEEEEEECCCCcEE
Confidence 35888888766 5885432 111 1110 111355666664321 235788888887665
No 296
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=44.37 E-value=1.5e+02 Score=25.22 Aligned_cols=15 Identities=7% Similarity=-0.028 Sum_probs=10.1
Q ss_pred CeEEEEECC-CCceEe
Q 018336 203 SSAWAYDLI-KDEWTE 217 (358)
Q Consensus 203 ~~~~~yd~~-t~~W~~ 217 (358)
..+.+|+.. +++.+.
T Consensus 282 ~~i~v~~~~~~g~~~~ 297 (365)
T 1jof_A 282 GYIAGFKLRDCGSIEK 297 (365)
T ss_dssp CEEEEEEECTTSCEEE
T ss_pred CeEEEEEECCCCCEEE
Confidence 368888875 566554
No 297
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=44.04 E-value=1.5e+02 Score=25.39 Aligned_cols=63 Identities=14% Similarity=0.146 Sum_probs=37.5
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCc---EEeCCCCCCCceeeee-EEE--CCEEEEEcCcCCCCCCCCeEEEEEC
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRR---WTRGKNMPDNRSFFAA-GEL--NGRVIIAGGHDENKTALSSAWAYDL 210 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~---W~~~~~~~~~~~~~~~-~~~--~~~iyv~GG~~~~~~~~~~~~~yd~ 210 (358)
+|.+||.+... ...++++++.... |-.-.+....+..... +.. +..|++..+ ...+..||.
T Consensus 147 ~GnaYVt~s~~------~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-------~g~L~~fD~ 213 (334)
T 2p9w_A 147 DGNSYVAFALG------MPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-------PRALTAFDV 213 (334)
T ss_dssp TSCEEEEEEES------SCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-------SSSEEEEEC
T ss_pred CCCEEEeCCCC------CCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-------CCeEEEEcC
Confidence 68999986542 1469999997653 4332332333444433 444 446666643 245899998
Q ss_pred CC
Q 018336 211 IK 212 (358)
Q Consensus 211 ~t 212 (358)
.+
T Consensus 214 ~~ 215 (334)
T 2p9w_A 214 SK 215 (334)
T ss_dssp SS
T ss_pred CC
Confidence 74
No 298
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=42.99 E-value=2.1e+02 Score=26.55 Aligned_cols=107 Identities=13% Similarity=0.123 Sum_probs=56.6
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEe-CCC--C---CCCceeeeeEE-ECCEEEEEcCcCCCCCCCCeEEEEE
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTR-GKN--M---PDNRSFFAAGE-LNGRVIIAGGHDENKTALSSAWAYD 209 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~-~~~--~---~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd 209 (358)
++.+++.|+.+ ..+.+||..+.+-.. +.. + .....-.+++. -++..++.|+.+ ..+.++|
T Consensus 201 dg~~las~s~D-------~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D------~~v~lWd 267 (611)
T 1nr0_A 201 DGSLFASTGGD-------GTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD------KTIKIWN 267 (611)
T ss_dssp TSSEEEEEETT-------SCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETT------SEEEEEE
T ss_pred CCCEEEEEECC-------CcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCC------CeEEEEe
Confidence 56677777643 368899988776533 211 0 11111112222 256666776644 3589999
Q ss_pred CCCCceEecCCCccC-cCceeEEEECCEEEEEeCcccCCCCceeeeeEEEECCCCc
Q 018336 210 LIKDEWTELARMTQE-RDECEAVVIGSEFWVVSGYKTERQGIFDESAESYQLGTGE 264 (358)
Q Consensus 210 ~~t~~W~~~~~~p~~-~~~~~~~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~ 264 (358)
..+.+....-..... ......+..++..++.++.+ ..+..||+.+++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d--------~~i~~~~~~~~~ 315 (611)
T 1nr0_A 268 VATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISAN--------GFINFVNPELGS 315 (611)
T ss_dssp TTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETT--------CCEEEEETTTTE
T ss_pred CCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCC--------CcEEEEeCCCCC
Confidence 988766432222111 11122334466666666543 245678877664
No 299
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=42.68 E-value=1.5e+02 Score=24.93 Aligned_cols=107 Identities=10% Similarity=-0.105 Sum_probs=60.6
Q ss_pred ECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEEE--CCEEEEEcCcCCCCCCCCeEEEEECCCC
Q 018336 136 SQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGEL--NGRVIIAGGHDENKTALSSAWAYDLIKD 213 (358)
Q Consensus 136 ~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~ 213 (358)
.++.||+.--. ....++++++....-+.+..-... .-.+.+.- ++.||+.-. ....++++|....
T Consensus 132 ~~g~ly~td~~------~~~~I~r~~~dG~~~~~~~~~~l~-~Pnglavd~~~~~lY~aD~------~~~~I~~~d~dG~ 198 (318)
T 3sov_A 132 SSGFMYWTDWG------EVPKIERAGMDGSSRFIIINSEIY-WPNGLTLDYEEQKLYWADA------KLNFIHKSNLDGT 198 (318)
T ss_dssp GGTEEEEEECS------SSCEEEEEETTSCSCEEEECSSCS-CEEEEEEETTTTEEEEEET------TTTEEEEEETTSC
T ss_pred CCCEEEEEecC------CCCEEEEEEcCCCCeEEEEECCCC-CccEEEEeccCCEEEEEEC------CCCEEEEEcCCCC
Confidence 36889987521 134799998864332322111111 11233332 689999832 2467999998754
Q ss_pred ceEecCCCccCcCceeEEEECCEEEEEeCcccCCCCceeeeeEEEECCCCc
Q 018336 214 EWTELARMTQERDECEAVVIGSEFWVVSGYKTERQGIFDESAESYQLGTGE 264 (358)
Q Consensus 214 ~W~~~~~~p~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~ 264 (358)
.-+.+..-. .....++++.++.+|+..-. ...|.++|+.+++
T Consensus 199 ~~~~~~~~~-~~~P~glav~~~~lywtd~~--------~~~V~~~~~~~G~ 240 (318)
T 3sov_A 199 NRQAVVKGS-LPHPFALTLFEDILYWTDWS--------THSILACNKYTGE 240 (318)
T ss_dssp SCEEEECSC-CSCEEEEEEETTEEEEEETT--------TTEEEEEETTTCC
T ss_pred ceEEEecCC-CCCceEEEEeCCEEEEEecC--------CCeEEEEECCCCC
Confidence 333332211 11224566778899998422 3478899997664
No 300
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=42.14 E-value=2.1e+02 Score=26.46 Aligned_cols=111 Identities=12% Similarity=0.060 Sum_probs=56.7
Q ss_pred EEEEcCcCCCCCCCCeEEEEECCCCceEecCCCccCcCceeEEE--ECCEEEEEeCcccCCCCceeeeeEEEECCCCceE
Q 018336 189 VIIAGGHDENKTALSSAWAYDLIKDEWTELARMTQERDECEAVV--IGSEFWVVSGYKTERQGIFDESAESYQLGTGEWK 266 (358)
Q Consensus 189 iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~--~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~ 266 (358)
.++.|+.+. .+.+||..+.+... .+.........+. -++++++.|+.+ ..+..||..+++-.
T Consensus 162 ~l~s~s~D~------~v~lwd~~~~~~~~--~l~~H~~~V~~v~fspdg~~las~s~D--------~~i~lwd~~~g~~~ 225 (611)
T 1nr0_A 162 RIISGSDDN------TVAIFEGPPFKFKS--TFGEHTKFVHSVRYNPDGSLFASTGGD--------GTIVLYNGVDGTKT 225 (611)
T ss_dssp EEEEEETTS------CEEEEETTTBEEEE--EECCCSSCEEEEEECTTSSEEEEEETT--------SCEEEEETTTCCEE
T ss_pred EEEEEeCCC------eEEEEECCCCeEee--eeccccCceEEEEECCCCCEEEEEECC--------CcEEEEECCCCcEe
Confidence 466665543 48888876654322 2222111122222 267777877653 25678898776543
Q ss_pred EcC-CccccCCCCCceeeeeecCccCceeccccceeeceEEEEeCCeEEEECCCCCCCCceEEEEECCCCceEe
Q 018336 267 RAE-NAWKLSQCPRSNVGVGREGKLFCWAETEAAVQFGTCRVELGGCTLVTGSGYQGGPQEFYVVEGRNGKFRK 339 (358)
Q Consensus 267 ~~~-~~p~~~~~~~~~~~~~~d~~~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~~~~~~i~~yd~~~~~W~~ 339 (358)
..- ...... ..+... .......-+++.++.|+.+ ..|.+||..+.+...
T Consensus 226 ~~~~~~~~~~-~~h~~~-------------------V~~v~~spdg~~l~s~s~D----~~v~lWd~~~~~~~~ 275 (611)
T 1nr0_A 226 GVFEDDSLKN-VAHSGS-------------------VFGLTWSPDGTKIASASAD----KTIKIWNVATLKVEK 275 (611)
T ss_dssp EECBCTTSSS-CSSSSC-------------------EEEEEECTTSSEEEEEETT----SEEEEEETTTTEEEE
T ss_pred eeeccccccc-cccCCC-------------------EEEEEECCCCCEEEEEeCC----CeEEEEeCCCCceee
Confidence 211 100000 011110 0111233467777777765 678889988776543
No 301
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=41.69 E-value=2.5e+02 Score=27.05 Aligned_cols=103 Identities=8% Similarity=0.031 Sum_probs=54.8
Q ss_pred ceeEEEECCC--CcEEeCCCCCCCceeeeeEEECCEEEEEcCcCC----CCCCCCeEEEEECCC--------CceEe-cC
Q 018336 155 SHVFVYDFTT--RRWTRGKNMPDNRSFFAAGELNGRVIIAGGHDE----NKTALSSAWAYDLIK--------DEWTE-LA 219 (358)
Q Consensus 155 ~~~~~yd~~t--~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~----~~~~~~~~~~yd~~t--------~~W~~-~~ 219 (358)
+++++.|... ..|..+ ..++........++.+|+....+- .......+...+..+ ..|+. +.
T Consensus 269 ~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 345 (711)
T 4hvt_A 269 YDNYILDTKYKNLKLQKI---NMPSDATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFT 345 (711)
T ss_dssp EEEEEEECSSSSCEEEEC---CSCTTCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEEC
T ss_pred eeEEEEcCCCCCCcceEe---ecCCcceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEEC
Confidence 4455555432 456555 222222223456889998753320 001245688888754 46887 33
Q ss_pred CCccCcCceeEEEECCEEEEEeCcccCCCCceeeeeEEEECCCCceEE
Q 018336 220 RMTQERDECEAVVIGSEFWVVSGYKTERQGIFDESAESYQLGTGEWKR 267 (358)
Q Consensus 220 ~~p~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~ 267 (358)
+-. ...-......++.+|+..-... ...+.++|+.+++|..
T Consensus 346 ~~~-~~~l~~~~~~~~~l~~~~~~~~------~~~l~~~~~~~g~~~~ 386 (711)
T 4hvt_A 346 PTA-NEVFNFISTTKDRVFLATYDNV------VAKVVTFTLENEQWTK 386 (711)
T ss_dssp CCT-TEEEEEEEECSSCEEEEEEETT------EEEEEEECEETTEECC
T ss_pred CCC-CCeEEEEEEECCEEEEEEEECC------EEEEEEEECCCCceEE
Confidence 222 2222234455677776653221 4467889988887743
No 302
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=41.59 E-value=1.9e+02 Score=25.68 Aligned_cols=104 Identities=13% Similarity=0.158 Sum_probs=56.2
Q ss_pred CEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCceE
Q 018336 138 GKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDEWT 216 (358)
Q Consensus 138 ~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~ 216 (358)
+.||+.-.. ..+.++|+.+++...+.. ...+. .+.+. .++.||+...... .....+..++.. ..|.
T Consensus 153 g~Lyv~D~~--------~~I~~id~~~g~v~~~~~-~~~~P-~giavd~dG~lyVad~~~~--~~~~gv~~~~~~-~~~~ 219 (433)
T 4hw6_A 153 DDLYWVGQR--------DAFRHVDFVNQYVDIKTT-NIGQC-ADVNFTLNGDMVVVDDQSS--DTNTGIYLFTRA-SGFT 219 (433)
T ss_dssp CEEEEECBT--------SCEEEEETTTTEEEEECC-CCSCE-EEEEECTTCCEEEEECCSC--TTSEEEEEECGG-GTTC
T ss_pred CEEEEEeCC--------CCEEEEECCCCEEEEeec-CCCCc-cEEEECCCCCEEEEcCCCC--cccceEEEEECC-CCee
Confidence 789998541 579999998888877643 11111 22222 3556998853221 112235555543 2232
Q ss_pred ---ecCCCccCcCceeEEEE--CCEEEEEeCcccCCCCceeeeeEEEECCCCce
Q 018336 217 ---ELARMTQERDECEAVVI--GSEFWVVSGYKTERQGIFDESAESYQLGTGEW 265 (358)
Q Consensus 217 ---~~~~~p~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W 265 (358)
.++.+..+ ..+++. ++.||+.... ...+++||+.+++-
T Consensus 220 ~~~~~~~~~~P---~giavd~~~G~lyv~d~~--------~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 220 ERLSLCNARGA---KTCAVHPQNGKIYYTRYH--------HAMISSYDPATGTL 262 (433)
T ss_dssp CEEEEEECSSB---CCCEECTTTCCEEECBTT--------CSEEEEECTTTCCE
T ss_pred ccccccccCCC---CEEEEeCCCCeEEEEECC--------CCEEEEEECCCCeE
Confidence 22222111 223322 6778887532 34688999987765
No 303
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=40.85 E-value=52 Score=30.90 Aligned_cols=164 Identities=13% Similarity=0.033 Sum_probs=88.6
Q ss_pred eEEEEeCCCCCeee-cCCCCCCCCCCCceeEEEEE--CCEEEEEcCcCCCCCCCcceeEEEECCCCc-E---------Ee
Q 018336 103 GVTVFDPVSLTWDR-LGPVPEYPAGLPLFCQVASS--QGKLVVMGGWDPASYSPVSHVFVYDFTTRR-W---------TR 169 (358)
Q Consensus 103 ~~~~~d~~~~~W~~-~~~~~~~~~~~~~~~~~~~~--~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~-W---------~~ 169 (358)
.+.+.|..+.+... +..+|.+.. + |++... +..+|+.+.. .+.+.+||..+.+ + ..
T Consensus 255 ~V~VID~~~~~~~~~~~~Ipvg~~--P--hGv~~sPDGk~v~V~~~~-------s~~VsVid~~~~~~~~~~~l~~~~~v 323 (595)
T 1fwx_A 255 GVKVVDGRKEASSLFTRYIPIANN--P--HGCNMAPDKKHLCVAGKL-------SPTVTVLDVTRFDAVFYENADPRSAV 323 (595)
T ss_dssp TEEEEECSGGGCCSSEEEEEEESS--C--CCEEECTTSSEEEEECTT-------SSBEEEEEGGGHHHHHHSCCCGGGGE
T ss_pred cEEEEeCcccCCceeEEEEecCCC--c--eEEEEcCCCCEEEEeCCC-------CCeEEEEECcccccccccccCcccce
Confidence 57889998833222 112222111 1 133333 4567777653 5689999998652 1 01
Q ss_pred CCCCCC-CceeeeeEEECCEEEEEcCcCCCCCCCCeEEEEECCC--------CceEecCCCccCcC-ceeEE------EE
Q 018336 170 GKNMPD-NRSFFAAGELNGRVIIAGGHDENKTALSSAWAYDLIK--------DEWTELARMTQERD-ECEAV------VI 233 (358)
Q Consensus 170 ~~~~~~-~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t--------~~W~~~~~~p~~~~-~~~~~------~~ 233 (358)
...++. .+-.|.+-.-++.+|+.-.. .+.+.++|.++ ..+..+..++.... +|..+ .-
T Consensus 324 ~~~v~vG~gP~h~aF~~dG~aY~t~~l------dsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~ 397 (595)
T 1fwx_A 324 VAEPELGLGPLHTAFDGRGNAYTSLFL------DSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDA 397 (595)
T ss_dssp EECCBCCSCEEEEEECTTSEEEEEETT------TTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTC
T ss_pred EEEcCCCCCcceEEECCCCeEEEEEec------CCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCC
Confidence 112222 23334443345688887432 35678888766 22444443333211 11111 23
Q ss_pred CCE-EEEEeCcccCCC----CceeeeeEEEECCCCceEEcCCccccCCCCCceeee
Q 018336 234 GSE-FWVVSGYKTERQ----GIFDESAESYQLGTGEWKRAENAWKLSQCPRSNVGV 284 (358)
Q Consensus 234 ~~~-lyv~gG~~~~~~----~~~~~~i~~yd~~~~~W~~~~~~p~~~~~~~~~~~~ 284 (358)
||+ ||+.-+++...- ......-+.||...++-+.+...|. ...||.+...
T Consensus 398 DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~m~lv~d~p~-~~ePh~~~i~ 452 (595)
T 1fwx_A 398 TNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDKMVLVHDGPT-FAEPHDAIAV 452 (595)
T ss_dssp CSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSSCEEEEEEEE-SSCCCCEEEE
T ss_pred CCCEEEEcCCCCccccccCCCCCCCcceEEEcCCCcEEEEEEEcC-CCCCCceEEc
Confidence 555 777777664321 1123344889998889888888776 5588887766
No 304
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=40.44 E-value=1.6e+02 Score=24.43 Aligned_cols=24 Identities=21% Similarity=0.068 Sum_probs=16.8
Q ss_pred EEeCCeEEEECCCCCCCCceEEEEECCC
Q 018336 307 VELGGCTLVTGSGYQGGPQEFYVVEGRN 334 (358)
Q Consensus 307 ~~~~~~i~v~gG~~~~~~~~i~~yd~~~ 334 (358)
...+++.++.|+.+ ..|.+||..+
T Consensus 294 ~spdg~~l~sg~~D----g~i~vWd~~t 317 (319)
T 3frx_A 294 WSADGQTLFAGYTD----NVIRVWQVMT 317 (319)
T ss_dssp ECTTSSEEEEEETT----SCEEEEEEEE
T ss_pred ECCCCCEEEEeecC----ceEEEEEEee
Confidence 44578888888765 5677777654
No 305
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=39.33 E-value=1.7e+02 Score=24.66 Aligned_cols=24 Identities=25% Similarity=0.101 Sum_probs=16.5
Q ss_pred EeCCeEEEECCCCCCCCceEEEEECCCC
Q 018336 308 ELGGCTLVTGSGYQGGPQEFYVVEGRNG 335 (358)
Q Consensus 308 ~~~~~i~v~gG~~~~~~~~i~~yd~~~~ 335 (358)
..++++++.|+.+ ..+.+||....
T Consensus 249 s~~~~~l~s~s~d----~~v~iw~~~~~ 272 (355)
T 3vu4_A 249 STDGSKLAVVSDK----WTLHVFEIFND 272 (355)
T ss_dssp CTTSCEEEEEETT----CEEEEEESSCC
T ss_pred CCCCCEEEEEECC----CEEEEEEccCC
Confidence 3467777777764 57888887654
No 306
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=38.80 E-value=1.3e+02 Score=28.36 Aligned_cols=71 Identities=13% Similarity=0.008 Sum_probs=44.7
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEE----ECCEEEEEcCcCC-----------CCCC
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGE----LNGRVIIAGGHDE-----------NKTA 201 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~----~~~~iyv~GG~~~-----------~~~~ 201 (358)
+..+|+.... ...+.+.|..+.+-..+-.+|....-|+.+. -++.+|+.+.... ...+
T Consensus 101 G~~lfVnd~~-------~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~ 173 (595)
T 1fwx_A 101 GRFLFMNDKA-------NTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANY 173 (595)
T ss_dssp EEEEEEEETT-------TTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGE
T ss_pred CCEEEEEcCC-------CCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCccccccccc
Confidence 4567885431 4579999999988665445665555566664 2567888753211 1123
Q ss_pred CCeEEEEECCCCc
Q 018336 202 LSSAWAYDLIKDE 214 (358)
Q Consensus 202 ~~~~~~yd~~t~~ 214 (358)
.+.+-+.|.++.+
T Consensus 174 ~~~vtvID~~t~~ 186 (595)
T 1fwx_A 174 VNVFTAVDADKWE 186 (595)
T ss_dssp EEEEEEEETTTTE
T ss_pred CceEEEEECCCCe
Confidence 4578888998753
No 307
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=36.82 E-value=2.4e+02 Score=25.49 Aligned_cols=100 Identities=8% Similarity=0.106 Sum_probs=47.5
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCce
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDEW 215 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W 215 (358)
++..++.++.+ ..+.+||..+..-..+.....+ -.+++. -++..++.|+.+ ..+.+||.....-
T Consensus 314 ~~~~l~t~~~d-------~~i~~w~~~~~~~~~~~~~~~~--v~~~~~s~~g~~l~~~~~d------g~v~~~~~~~~~~ 378 (577)
T 2ymu_A 314 DGQTIASASDD-------KTVKLWNRNGQHLQTLTGHSSS--VWGVAFSPDGQTIASASDD------KTVKLWNRNGQLL 378 (577)
T ss_dssp TSSEEEEEETT-------SCEEEEETTSCEEEEECCCSSC--EEEEEECTTSSEEEEEETT------SEEEEEETTCCEE
T ss_pred CCCEEEEEeCC-------CeEEEEeCCCCeeEEEeCCCCC--EEEEEECCCCCEEEEEeCC------CEEEEEcCCCCEE
Confidence 45555555532 2577788766554443322111 112222 255566666533 3578888655443
Q ss_pred EecCCCccCcCceeEE--EECCEEEEEeCcccCCCCceeeeeEEEECCC
Q 018336 216 TELARMTQERDECEAV--VIGSEFWVVSGYKTERQGIFDESAESYQLGT 262 (358)
Q Consensus 216 ~~~~~~p~~~~~~~~~--~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~ 262 (358)
..+.... .....+ .-+++.++.|+.+ ..+..||...
T Consensus 379 ~~~~~~~---~~v~~~~~s~dg~~l~~~~~d--------~~v~~~~~~~ 416 (577)
T 2ymu_A 379 QTLTGHS---SSVRGVAFSPDGQTIASASDD--------KTVKLWNRNG 416 (577)
T ss_dssp EEEECCS---SCEEEEEECTTSSCEEEEETT--------SEEEEECTTC
T ss_pred EEecCCC---CCeEEEEECCCCCEEEEEeCC--------CEEEEEeCCC
Confidence 3332211 111222 2256666666542 2456777543
No 308
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=36.68 E-value=2e+02 Score=25.66 Aligned_cols=71 Identities=14% Similarity=0.161 Sum_probs=39.8
Q ss_pred CCEEEEEcCcCC---CCCCCCeEEEEECCCCceEecCCCccCcCceeEE-EECCE--EEEEeCcccCCCCceeeeeEEEE
Q 018336 186 NGRVIIAGGHDE---NKTALSSAWAYDLIKDEWTELARMTQERDECEAV-VIGSE--FWVVSGYKTERQGIFDESAESYQ 259 (358)
Q Consensus 186 ~~~iyv~GG~~~---~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~-~~~~~--lyv~gG~~~~~~~~~~~~i~~yd 259 (358)
++++|+.-.... ++...+.+.++|..+.+= +..++.+....+++ .-+++ +|+.... .+.+.++|
T Consensus 330 g~rlyVa~~~~~~gthk~~s~~VsVID~~T~kv--v~~I~vg~~P~gia~spDg~~~lyv~n~~--------s~~VsVID 399 (426)
T 3c75_H 330 SDRIYLLVDQRDEWKHKAASRFVVVLNAETGER--INKIELGHEIDSINVSQDAEPLLYALSAG--------TQTLHIYD 399 (426)
T ss_dssp GTEEEEEEEECCTTCTTSCEEEEEEEETTTCCE--EEEEEEEEEECEEEECCSSSCEEEEEETT--------TTEEEEEE
T ss_pred CCEEEEEecccccccccCCCCEEEEEECCCCeE--EEEEECCCCcCeEEEccCCCEEEEEEcCC--------CCeEEEEE
Confidence 578999743211 111246799999988653 33333332222232 33454 6665532 34788999
Q ss_pred CCCCceE
Q 018336 260 LGTGEWK 266 (358)
Q Consensus 260 ~~~~~W~ 266 (358)
..+.+-.
T Consensus 400 ~~t~kvv 406 (426)
T 3c75_H 400 AATGEEL 406 (426)
T ss_dssp TTTCCEE
T ss_pred CCCCCEE
Confidence 9887643
No 309
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=35.82 E-value=3e+02 Score=26.40 Aligned_cols=62 Identities=13% Similarity=0.159 Sum_probs=38.6
Q ss_pred CCceEecCCCccCcCceeEEEE-CCEEEEEeCccc-CCCCceeeeeEEEECCCCceEEcCCccc
Q 018336 212 KDEWTELARMTQERDECEAVVI-GSEFWVVSGYKT-ERQGIFDESAESYQLGTGEWKRAENAWK 273 (358)
Q Consensus 212 t~~W~~~~~~p~~~~~~~~~~~-~~~lyv~gG~~~-~~~~~~~~~i~~yd~~~~~W~~~~~~p~ 273 (358)
-.+|+.+..+|.....+.++.. ++.+|+..+-.. ...+.....+++++-...+|+.+...|.
T Consensus 231 G~tW~~~~~~p~~~~~~~~~~~~~~~l~~~~~d~~g~y~~~~~g~v~~s~d~G~tW~~i~~~~~ 294 (737)
T 2cn3_A 231 GVTWKAVPGQPKGLLPHHGVLASNGMLYITYGDTCGPYDGNGKGQVWKFNTRTGEWIDITPIPY 294 (737)
T ss_dssp TSCCEECTTCCCSSEEEEEEECTTSEEEEEEESSCCSSCCSCCEEEEEEETTTCCEEECCSSCT
T ss_pred CCceEECCCCCCcccceEEEECCCCeEEEEecCCCCccccccCceEEEEeCCCCCEEEccCCCC
Confidence 4579999877764433333322 778998754211 0001024568889999999999987653
No 310
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=35.17 E-value=1.6e+02 Score=22.93 Aligned_cols=102 Identities=13% Similarity=0.105 Sum_probs=54.1
Q ss_pred ECCEEEEEcCcCCCCCCCcceeEEEECCCCcE---EeCCC----CCCCceeeeeEE-ECCEEEEEcCcCCCCCCCCeEEE
Q 018336 136 SQGKLVVMGGWDPASYSPVSHVFVYDFTTRRW---TRGKN----MPDNRSFFAAGE-LNGRVIIAGGHDENKTALSSAWA 207 (358)
Q Consensus 136 ~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W---~~~~~----~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~ 207 (358)
.++++|++-| +.+|+|+..+... +.+.. +|......+... .++++|++-| +..+.
T Consensus 60 ~~g~~yfFkg---------~~yw~~~~~~~~~gyPk~I~~~~~glP~~~IDAA~~~~~~g~~yfFkG--------~~yw~ 122 (196)
T 3c7x_A 60 KDGKFVFFKG---------DKHWVFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRG--------NKYYR 122 (196)
T ss_dssp TTSCEEEEET---------TEEEEEETTEECTTCSEEGGGTCBSCCSSCCSEEEEETTTTEEEEEET--------TEEEE
T ss_pred CCCcEEEecC---------CEEEEEeCCcccCCCCeEhhhcCCCCCCCcccEEEEEccCCEEEEEEC--------CEEEE
Confidence 4688999976 3689998642110 11221 332222222211 2689999955 45888
Q ss_pred EECCCCceEe-----cCCCcc-CcCceeEEEE-CC-EEEEEeCcccCCCCceeeeeEEEECCCCc
Q 018336 208 YDLIKDEWTE-----LARMTQ-ERDECEAVVI-GS-EFWVVSGYKTERQGIFDESAESYQLGTGE 264 (358)
Q Consensus 208 yd~~t~~W~~-----~~~~p~-~~~~~~~~~~-~~-~lyv~gG~~~~~~~~~~~~i~~yd~~~~~ 264 (358)
||..+++-.. +...+. +..-.++... ++ ++|++-|. ..+.||..+.+
T Consensus 123 yd~~~~~v~~gyPk~i~~~~gip~~idaAf~~~~~~~~YfFkg~----------~y~r~d~~~~~ 177 (196)
T 3c7x_A 123 FNEELRAVDSEYPKNIKVWEGIPESPRGSFMGSDEVFTYFYKGN----------KYWKFNNQKLK 177 (196)
T ss_dssp EETTTTEECTTCSEEGGGSBTCCSSCSEEEECTTSSEEEEEETT----------EEEEEETTTTE
T ss_pred EeCCcccccCCCCccHHHCCCcCCCcceeEEecCCCEEEEEECC----------EEEEEECCcce
Confidence 9987754321 111111 1111233333 44 89999764 34788887764
No 311
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=34.58 E-value=2.2e+02 Score=24.50 Aligned_cols=60 Identities=15% Similarity=-0.019 Sum_probs=30.6
Q ss_pred ceEEEEeCCCCCeeecCCCC-CCC---CCCCceeEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCCcEE
Q 018336 102 YGVTVFDPVSLTWDRLGPVP-EYP---AGLPLFCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWT 168 (358)
Q Consensus 102 ~~~~~~d~~~~~W~~~~~~~-~~~---~~~~~~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~ 168 (358)
..+..||+.+.+-..--+++ .++ ...+....+..-+..||+.... ..+.+.++| .+++-.
T Consensus 97 ~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~------~~~~v~viD-~t~~~~ 160 (373)
T 2mad_H 97 DYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFA------AGPAVGLVV-QGGSSD 160 (373)
T ss_pred CeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecC------CCCeEEEEE-CCCCEE
Confidence 46789999876432211121 000 0001222222345678887531 135799999 887653
No 312
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=32.26 E-value=2.2e+02 Score=23.72 Aligned_cols=62 Identities=11% Similarity=0.304 Sum_probs=32.4
Q ss_pred CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEe-CCCCCCCceeeeeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCC
Q 018336 137 QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTR-GKNMPDNRSFFAAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKD 213 (358)
Q Consensus 137 ~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~-~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~ 213 (358)
++.+.+.|+.+ ..+.+||..+.+... +..-.. .-.+++. -++..++.||.+ ..+.+||....
T Consensus 87 ~~~~l~s~s~D-------~~v~lwd~~~~~~~~~~~~h~~--~v~~v~~sp~~~~l~s~~~d------~~i~~wd~~~~ 150 (343)
T 2xzm_R 87 ENCFAISSSWD-------KTLRLWDLRTGTTYKRFVGHQS--EVYSVAFSPDNRQILSAGAE------REIKLWNILGE 150 (343)
T ss_dssp STTEEEEEETT-------SEEEEEETTSSCEEEEEECCCS--CEEEEEECSSTTEEEEEETT------SCEEEEESSSC
T ss_pred CCCEEEEEcCC-------CcEEEEECCCCcEEEEEcCCCC--cEEEEEECCCCCEEEEEcCC------CEEEEEeccCC
Confidence 45556666543 378899998765422 211111 1111222 245566666644 34888888644
No 313
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=31.28 E-value=3.6e+02 Score=25.89 Aligned_cols=150 Identities=13% Similarity=0.117 Sum_probs=77.7
Q ss_pred ceEEEEeCCC--CCeeecCCCCCCCCCCCceeEEEEECCEEEEEcCcC--CC-CCCCcceeEEEECCC--------CcEE
Q 018336 102 YGVTVFDPVS--LTWDRLGPVPEYPAGLPLFCQVASSQGKLVVMGGWD--PA-SYSPVSHVFVYDFTT--------RRWT 168 (358)
Q Consensus 102 ~~~~~~d~~~--~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~Gg~~--~~-~~~~~~~~~~yd~~t--------~~W~ 168 (358)
..++..|... ..|..+ ..|.. ...+...++.+|+....+ .. ..-+...+.++|..+ ..|+
T Consensus 269 ~~~~~~~~~~~~~~~~~l-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 341 (711)
T 4hvt_A 269 YDNYILDTKYKNLKLQKI-NMPSD------ATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLK 341 (711)
T ss_dssp EEEEEEECSSSSCEEEEC-CSCTT------CEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCE
T ss_pred eeEEEEcCCCCCCcceEe-ecCCc------ceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccce
Confidence 4455555442 557666 22321 112456689999976432 10 001245788888764 4688
Q ss_pred e-CCCCCCCceeeeeEEECCEEEEEcCcCCCCCCCCeEEEEECCCCceEec--CCCccCcCceeEEE--ECC-EEEEE-e
Q 018336 169 R-GKNMPDNRSFFAAGELNGRVIIAGGHDENKTALSSAWAYDLIKDEWTEL--ARMTQERDECEAVV--IGS-EFWVV-S 241 (358)
Q Consensus 169 ~-~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~--~~~p~~~~~~~~~~--~~~-~lyv~-g 241 (358)
. +++-. .+.--.....++.+|+..-.+ ....+.++|+.++.|... ..+|.. ....... .++ .+++. .
T Consensus 342 ~~~~~~~-~~~l~~~~~~~~~l~~~~~~~----~~~~l~~~~~~~g~~~~~~~i~lp~~-~~~~~~~~~~~~~~~~~~~s 415 (711)
T 4hvt_A 342 ILFTPTA-NEVFNFISTTKDRVFLATYDN----VVAKVVTFTLENEQWTKPVVLKLPYQ-NAIFGMSSYEEEEEALITIE 415 (711)
T ss_dssp EEECCCT-TEEEEEEEECSSCEEEEEEET----TEEEEEEECEETTEECCCEEECCCST-TCEEEEECCTTCSCEEEEEE
T ss_pred EEECCCC-CCeEEEEEEECCEEEEEEEEC----CEEEEEEEECCCCceEEEeccCCCCC-eEEEEEeecCcCCEEEEEEe
Confidence 6 43322 222223334566777653222 235788999888888432 234432 1122222 223 33333 3
Q ss_pred CcccCCCCceeeeeEEEECCCCceEEcCCc
Q 018336 242 GYKTERQGIFDESAESYQLGTGEWKRAENA 271 (358)
Q Consensus 242 G~~~~~~~~~~~~i~~yd~~~~~W~~~~~~ 271 (358)
+.. . ...++.||.. ++++.+...
T Consensus 416 s~~--~----P~~~~~~d~~-~~~~~l~~~ 438 (711)
T 4hvt_A 416 NSI--V----PPTIYLWVKT-HELKIIRKA 438 (711)
T ss_dssp CSS--S----CCEEEEECTT-SCEEEEECC
T ss_pred cCC--C----CCEEEEEeCC-CcEEEEecC
Confidence 332 2 4577889988 777776654
No 314
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=28.28 E-value=3.2e+02 Score=24.29 Aligned_cols=61 Identities=20% Similarity=0.161 Sum_probs=33.7
Q ss_pred ceEEEEeCCCCCeeecCCCC-CCC---CCCCceeEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCCcEE
Q 018336 102 YGVTVFDPVSLTWDRLGPVP-EYP---AGLPLFCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWT 168 (358)
Q Consensus 102 ~~~~~~d~~~~~W~~~~~~~-~~~---~~~~~~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~ 168 (358)
..+.++|+.+++-..--+++ .++ ...+....+..-+..+|+.... ..+.+.++|..+++-.
T Consensus 149 ~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~------~~~~VsVID~~t~kvv 213 (426)
T 3c75_H 149 DYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS------PAPAVGVVDLEGKTFD 213 (426)
T ss_dssp EEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS------SSCEEEEEETTTTEEE
T ss_pred CEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC------CCCeEEEEECCCCeEE
Confidence 46899999998753321122 000 0002222333335678887531 1357999999987753
No 315
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=28.15 E-value=2.9e+02 Score=23.77 Aligned_cols=143 Identities=13% Similarity=0.121 Sum_probs=76.9
Q ss_pred eEEEEeCCCCCeeecCCCCC-CCC-C------CCceeEEEEE----CCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeC
Q 018336 103 GVTVFDPVSLTWDRLGPVPE-YPA-G------LPLFCQVASS----QGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRG 170 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~-~~~-~------~~~~~~~~~~----~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~ 170 (358)
.++..+....+|..+...+. +.. . ...-.+++.. .+.||+.+. ...+++.+-...+|+.+
T Consensus 82 gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~--------~ggl~~S~DgG~tW~~~ 153 (394)
T 3b7f_A 82 TVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTS--------PQGLFRSTDHGASWEPV 153 (394)
T ss_dssp EEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEE--------TTEEEEESSTTSBCEEC
T ss_pred cEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEec--------CCcEEEEcCCCCCeEEC
Confidence 46777777889998864211 110 0 0011123332 467777643 23588888888899987
Q ss_pred CCC---CC--------------CceeeeeEEE---CCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCC-C-----ccC
Q 018336 171 KNM---PD--------------NRSFFAAGEL---NGRVIIAGGHDENKTALSSAWAYDLIKDEWTELAR-M-----TQE 224 (358)
Q Consensus 171 ~~~---~~--------------~~~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~-~-----p~~ 224 (358)
... |. ....+.++.. .+.||+.... ..++..+-...+|+.+.. + |..
T Consensus 154 ~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~-------ggl~~s~DgG~tW~~~~~~~~~~~~p~~ 226 (394)
T 3b7f_A 154 AGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSS-------GGVFESTDAGTDWKPLNRGCAANFLPDP 226 (394)
T ss_dssp HHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEET-------BEEEEESSTTSSCEECCTTCCCTTSSSS
T ss_pred cCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECC-------CCEEEECCCCCCceECCCCccccccCCC
Confidence 431 21 1112233332 2567775321 247777777789998753 1 211
Q ss_pred -----cCceeEEEEC---CEEEEEeCcccCCCCceeeeeEEEECCCCceEEcCC
Q 018336 225 -----RDECEAVVIG---SEFWVVSGYKTERQGIFDESAESYQLGTGEWKRAEN 270 (358)
Q Consensus 225 -----~~~~~~~~~~---~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~~ 270 (358)
...+.++... +.||+... ..+++.+-...+|+.+..
T Consensus 227 ~~~~g~~~~~i~~~~~~~~~l~vg~~----------~gl~~s~D~G~tW~~~~~ 270 (394)
T 3b7f_A 227 NVEFGHDPHCVVQHPAAPDILYQQNH----------CGIYRMDRREGVWKRIGD 270 (394)
T ss_dssp SSSSCBCEEEEEECSSSTTEEEEEET----------TEEEEEETTTTEEECGGG
T ss_pred ccccCcceeEEEECCCCCCEEEEEcC----------CeEEEeCCCCCcceECCC
Confidence 1112233221 56777431 246778888889998864
No 316
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=26.02 E-value=5.1e+02 Score=25.91 Aligned_cols=112 Identities=11% Similarity=0.051 Sum_probs=58.3
Q ss_pred eEEEEeCCCCCeeecCCCCCCCCCCCceeEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCc---ee
Q 018336 103 GVTVFDPVSLTWDRLGPVPEYPAGLPLFCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNR---SF 179 (358)
Q Consensus 103 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~---~~ 179 (358)
.++.+|...+.-..+...+. .......+-++...++....+.. .....++++|..+.+-+.+...+... ..
T Consensus 34 ~l~~~~~~gg~~~~lt~~~~-----~v~~~~~SPDG~~la~~s~~~~~-~~~~~i~~~d~~~g~~~~lt~~~~~~~~~~~ 107 (1045)
T 1k32_A 34 DLWEHDLKSGSTRKIVSNLG-----VINNARFFPDGRKIAIRVMRGSS-LNTADLYFYNGENGEIKRITYFSGKSTGRRM 107 (1045)
T ss_dssp EEEEEETTTCCEEEEECSSS-----EEEEEEECTTSSEEEEEEEESTT-CCEEEEEEEETTTTEEEECCCCCEEEETTEE
T ss_pred cEEEEECCCCcEEEeeeCCC-----cccCeEECCCCCEEEEEEeeccC-CCCCeEEEEECCCCCeEEcccCCCccccccc
Confidence 68889988887766654322 11112222255544443221000 01357999999888766664432111 00
Q ss_pred --eeeEE-ECCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCC
Q 018336 180 --FAAGE-LNGRVIIAGGHDENKTALSSAWAYDLIKDEWTELAR 220 (358)
Q Consensus 180 --~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~ 220 (358)
...+. -++++++.+..+........++.+|..++.-+.+..
T Consensus 108 ~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~ 151 (1045)
T 1k32_A 108 FTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNL 151 (1045)
T ss_dssp CSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCS
T ss_pred ccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEecC
Confidence 12222 256666665543222233568888888777665543
No 317
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=25.64 E-value=3.7e+02 Score=24.23 Aligned_cols=69 Identities=12% Similarity=0.009 Sum_probs=36.3
Q ss_pred CCEEEEEcCcCCCCCCCCeEEEEECCCC----ceEecC---CC----ccCcCceeEE-EECCEEEEEeCcccCCCCceee
Q 018336 186 NGRVIIAGGHDENKTALSSAWAYDLIKD----EWTELA---RM----TQERDECEAV-VIGSEFWVVSGYKTERQGIFDE 253 (358)
Q Consensus 186 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~----~W~~~~---~~----p~~~~~~~~~-~~~~~lyv~gG~~~~~~~~~~~ 253 (358)
..++|+-|..+ +.++++|..++ +-.+.- .+ ...+ .|.+. .-+| |||..--+.. |....
T Consensus 95 r~~l~v~~l~s------~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~-Ph~~~~~pdG-i~Vs~~g~~~--g~~~g 164 (462)
T 2ece_A 95 RRFLIVPGLRS------SRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSR-LHTVHCGPDA-IYISALGNEE--GEGPG 164 (462)
T ss_dssp SCEEEEEBTTT------CCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEE-EEEEEECSSC-EEEEEEEETT--SCSCC
T ss_pred CCEEEEccCCC------CeEEEEECCCCCCCceeeeeechhhcccccCCCc-ccceeECCCe-EEEEcCCCcC--CCCCC
Confidence 45677776543 56999999877 222211 11 1111 22233 3345 8775422211 12256
Q ss_pred eeEEEECCCCc
Q 018336 254 SAESYQLGTGE 264 (358)
Q Consensus 254 ~i~~yd~~~~~ 264 (358)
.+..+|.++.+
T Consensus 165 ~v~vlD~~T~~ 175 (462)
T 2ece_A 165 GILMLDHYSFE 175 (462)
T ss_dssp EEEEECTTTCC
T ss_pred eEEEEECCCCe
Confidence 78889988754
No 318
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=25.61 E-value=3e+02 Score=23.07 Aligned_cols=126 Identities=9% Similarity=0.016 Sum_probs=60.8
Q ss_pred CCEEEEEcCcCCCCCCCCeEEEEECCCCceEecCCC---c-cCcCceeEEEE--CCEEEEEeCcccCCCCceeeeeEEEE
Q 018336 186 NGRVIIAGGHDENKTALSSAWAYDLIKDEWTELARM---T-QERDECEAVVI--GSEFWVVSGYKTERQGIFDESAESYQ 259 (358)
Q Consensus 186 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~---p-~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~~~i~~yd 259 (358)
++++|+.......+. ..+..++ +++-...+.. + ........+.+ +|+||++.-.... .....+.+||
T Consensus 27 ~g~~~v~~~~~~~~~--~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~---~~~~~i~~~d 99 (343)
T 2qe8_A 27 DGRLFLSLHQFYQPE--MQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQS---KSVPKLVAWD 99 (343)
T ss_dssp TSCEEEEECGGGCCS--CSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHH---TSCCEEEEEE
T ss_pred CCCEEEEeCCCCCCc--eEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCc---CCCCeEEEEE
Confidence 678888853211111 4567777 4444433321 1 11122333444 4789998632100 0024688999
Q ss_pred CCCCceEEcCCccccCCCCCceeeeeecCccCceeccccceeeceEEEEe--CCeEEEECCCCCCCCceEEEEECCCCc-
Q 018336 260 LGTGEWKRAENAWKLSQCPRSNVGVGREGKLFCWAETEAAVQFGTCRVEL--GGCTLVTGSGYQGGPQEFYVVEGRNGK- 336 (358)
Q Consensus 260 ~~~~~W~~~~~~p~~~~~~~~~~~~~~d~~~~~W~~lp~~~r~~~~~~~~--~~~i~v~gG~~~~~~~~i~~yd~~~~~- 336 (358)
+.+++-...-.++.....+.. +...++.. ++.+||...... ....|.+||+.+++
T Consensus 100 ~~tg~~~~~~~~~~~~~~~~~---------------------~~~~v~vd~~~g~~yvtd~~~~-~~~~i~v~d~~~g~~ 157 (343)
T 2qe8_A 100 TLNNQLSRVIYLPPPITLSNS---------------------FVNDLAVDLIHNFVYISDPAPD-DKAALIRVDLQTGLA 157 (343)
T ss_dssp TTTTEEEEEEECCTTTSCTTC---------------------CCCEEEEETTTTEEEEEECCSG-GGCEEEEEETTTCCE
T ss_pred CCCCeEEEEEECChhhccccc---------------------ccceEEEecCCCEEEEEcCccC-CCCeEEEEECCCCCE
Confidence 998874332222211000000 01122332 578888743100 11689999998765
Q ss_pred eEee
Q 018336 337 FRKF 340 (358)
Q Consensus 337 W~~~ 340 (358)
|+.+
T Consensus 158 ~r~~ 161 (343)
T 2qe8_A 158 ARVL 161 (343)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 5544
No 319
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=25.37 E-value=2.3e+02 Score=24.12 Aligned_cols=72 Identities=18% Similarity=0.234 Sum_probs=41.1
Q ss_pred CCEEEEEcCcC---CCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEEE--CCEEEEEcCcCCCCCCCCeEEEEECC
Q 018336 137 QGKLVVMGGWD---PASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGEL--NGRVIIAGGHDENKTALSSAWAYDLI 211 (358)
Q Consensus 137 ~~~lyv~Gg~~---~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~ 211 (358)
++.+|+....+ +........++++|..+.+- +..++... ..+++.- +..+|+.++ +.+.+||.+
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~--v~~i~~~~-p~~ia~spdg~~l~v~n~--------~~v~v~D~~ 333 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQR--VARIPGRD-ALSMTIDQQRNLMLTLDG--------GNVNVYDIS 333 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEE--EEEEECTT-CCEEEEETTTTEEEEECS--------SCEEEEECS
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCcE--EEEEecCC-eeEEEECCCCCEEEEeCC--------CeEEEEECC
Confidence 57899875411 11111245899999988753 33333333 3333332 456776642 569999998
Q ss_pred CCceEecC
Q 018336 212 KDEWTELA 219 (358)
Q Consensus 212 t~~W~~~~ 219 (358)
+++-+.+.
T Consensus 334 t~~l~~~~ 341 (361)
T 2oiz_A 334 QPEPKLLR 341 (361)
T ss_dssp SSSCEEEE
T ss_pred CCcceeeE
Confidence 87324433
No 320
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=24.89 E-value=3.3e+02 Score=23.36 Aligned_cols=29 Identities=10% Similarity=0.012 Sum_probs=18.9
Q ss_pred ECCEEEEEeCcccCCCCceeeeeEEEECCCCceEEcC
Q 018336 233 IGSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRAE 269 (358)
Q Consensus 233 ~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~ 269 (358)
-+++.++.|+.+ ..+..||..+++-..+.
T Consensus 352 ~~~~~l~s~s~d--------g~v~iwd~~~~~~~~~~ 380 (447)
T 3dw8_B 352 GSDSVVMTGSYN--------NFFRMFDRNTKRDITLE 380 (447)
T ss_dssp TTSSEEEEECST--------TEEEEEETTTCCEEEEE
T ss_pred CCCCEEEEeccC--------CEEEEEEcCCCcceeee
Confidence 356666777643 35788999988765443
No 321
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=24.15 E-value=3.7e+02 Score=23.62 Aligned_cols=60 Identities=13% Similarity=0.121 Sum_probs=31.9
Q ss_pred CEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEEE--CCEEEEEcCcCCCCCCCCeEEEEECCC
Q 018336 138 GKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGEL--NGRVIIAGGHDENKTALSSAWAYDLIK 212 (358)
Q Consensus 138 ~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t 212 (358)
+.+++.|+.+ ..+.+||..+..-.. .... .......+.. +++.++.|+.+ ..+.+||+..
T Consensus 162 ~~~las~s~D-------g~v~iwD~~~~~~~~-~~~~-~~~~v~~v~wspdg~~lasgs~d------g~v~iwd~~~ 223 (434)
T 2oit_A 162 PSMVAVCLAD-------GSIAVLQVTETVKVC-ATLP-STVAVTSVCWSPKGKQLAVGKQN------GTVVQYLPTL 223 (434)
T ss_dssp TTEEEEEETT-------SCEEEEEESSSEEEE-EEEC-GGGCEEEEEECTTSSCEEEEETT------SCEEEECTTC
T ss_pred CCEEEEEECC-------CeEEEEEcCCCccee-eccC-CCCceeEEEEcCCCCEEEEEcCC------CcEEEEccCC
Confidence 5667766643 368899988763211 1111 1111122222 56666666644 3488999873
No 322
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=22.25 E-value=5.1e+02 Score=24.58 Aligned_cols=57 Identities=2% Similarity=-0.069 Sum_probs=31.7
Q ss_pred eEEEEECCC---C---ceEecCCCc----cCcCceeE-EEECCEEEEEeCcccCCCCceeeeeEEEECCCCc
Q 018336 204 SAWAYDLIK---D---EWTELARMT----QERDECEA-VVIGSEFWVVSGYKTERQGIFDESAESYQLGTGE 264 (358)
Q Consensus 204 ~~~~yd~~t---~---~W~~~~~~p----~~~~~~~~-~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~ 264 (358)
.++++|..+ + +...+.... ........ ..-||+++++.-.... ....+..+|+.+++
T Consensus 229 ~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~----~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 229 KFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQ----NYSVMDICDYDESS 296 (740)
T ss_dssp EEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESST----TEEEEEEEEEETTT
T ss_pred EEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCC----CEEEEEEEECCCCc
Confidence 688899998 7 676664211 11111122 2558886554322211 13468888988776
No 323
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=21.73 E-value=5.8e+02 Score=25.09 Aligned_cols=158 Identities=6% Similarity=-0.019 Sum_probs=0.0
Q ss_pred CceeEEEEECCEEEEEcCcCCCCCCCcceeEEEECCCCcEEeCCCCCCCceeeeeEEECCEEEEEcCcCCCCCCCCeEEE
Q 018336 128 PLFCQVASSQGKLVVMGGWDPASYSPVSHVFVYDFTTRRWTRGKNMPDNRSFFAAGELNGRVIIAGGHDENKTALSSAWA 207 (358)
Q Consensus 128 ~~~~~~~~~~~~lyv~Gg~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 207 (358)
.....+..-++.+.+.|+.++ .+.+||..+..-.....-..+........ +..++.|+.+.. +.+
T Consensus 19 ~V~~lafspdg~~lAsgs~Dg-------~I~lw~~~~~~~~~~~~~~~~V~~l~fsp--g~~L~S~s~D~~------v~l 83 (902)
T 2oaj_A 19 KPIAAAFDFTQNLLAIATVTG-------EVHIYGQQQVEVVIKLEDRSAIKEMRFVK--GIYLVVINAKDT------VYV 83 (902)
T ss_dssp CEEEEEEETTTTEEEEEETTS-------EEEEECSTTCEEEEECSSCCCEEEEEEET--TTEEEEEETTCE------EEE
T ss_pred CcEEEEECCCCCEEEEEeCCC-------EEEEEeCCCcEEEEEcCCCCCEEEEEEcC--CCEEEEEECcCe------EEE
Q ss_pred EECCCCceEecCCCccCcCceeEEEECCEEEEEeCcccCCCCceeeeeEEEECCCCceEEcC--------CccccCCCCC
Q 018336 208 YDLIKDEWTELARMTQERDECEAVVIGSEFWVVSGYKTERQGIFDESAESYQLGTGEWKRAE--------NAWKLSQCPR 279 (358)
Q Consensus 208 yd~~t~~W~~~~~~p~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~~~i~~yd~~~~~W~~~~--------~~p~~~~~~~ 279 (358)
+|..+++-...-..+ .........-+++..+.|+. ...+..||..+++-.... ..+.....+.
T Consensus 84 Wd~~~~~~~~~~~~~-~~V~~v~~sp~g~~l~sgs~--------dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V 154 (902)
T 2oaj_A 84 LSLYSQKVLTTVFVP-GKITSIDTDASLDWMLIGLQ--------NGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPI 154 (902)
T ss_dssp EETTTCSEEEEEECS-SCEEEEECCTTCSEEEEEET--------TSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCC
T ss_pred EECCCCcEEEEEcCC-CCEEEEEECCCCCEEEEEcC--------CCcEEEEECCCCccccceeccccccccccccCCCCe
Q ss_pred ceeeeeecCccCceeccccceeeceEEEEeCCeEEEECCCCCCCCceEEEEECCCCc
Q 018336 280 SNVGVGREGKLFCWAETEAAVQFGTCRVELGGCTLVTGSGYQGGPQEFYVVEGRNGK 336 (358)
Q Consensus 280 ~~~~~~~d~~~~~W~~lp~~~r~~~~~~~~~~~i~v~gG~~~~~~~~i~~yd~~~~~ 336 (358)
..+.. ...++.++++|+.+ ..+ +||..+++
T Consensus 155 ~sl~~----------------------sp~~~~~l~~g~~d----g~v-lWd~~~~~ 184 (902)
T 2oaj_A 155 VSIQW----------------------NPRDIGTVLISYEY----VTL-TYSLVENE 184 (902)
T ss_dssp CEEEE----------------------ETTEEEEEEEECSS----CEE-EEETTTTE
T ss_pred EEEEE----------------------ccCCCCEEEEEeCC----CcE-EEECCCCc
Done!