Query 018337
Match_columns 357
No_of_seqs 153 out of 758
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 13:41:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018337.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018337hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3v7d_A Suppressor of kinetocho 100.0 1.2E-44 4E-49 323.0 13.5 149 11-160 2-163 (169)
2 2p1m_A SKP1-like protein 1A; F 100.0 3E-42 1E-46 304.1 2.6 142 14-160 3-155 (160)
3 2ast_A S-phase kinase-associat 100.0 1.7E-40 5.9E-45 291.7 12.3 144 16-160 2-156 (159)
4 1fs1_B SKP1, cyclin A/CDK2-ass 100.0 3.5E-40 1.2E-44 285.5 10.5 130 15-150 2-141 (141)
5 2fnj_C Transcription elongatio 99.9 1.6E-24 5.5E-29 176.6 5.3 94 16-115 2-96 (96)
6 1vcb_B Protein (elongin C); tu 99.9 2.4E-24 8.1E-29 180.8 6.1 96 14-115 16-112 (112)
7 1hv2_A Elongin C, ELC1; protei 99.9 2.1E-24 7.2E-29 177.0 5.2 94 14-115 3-99 (99)
8 4ajy_C Transcription elongatio 99.8 1.3E-21 4.3E-26 159.0 6.1 94 16-115 3-97 (97)
9 2vkp_A BTB/POZ domain-containi 98.3 3.5E-06 1.2E-10 67.1 9.7 97 14-129 8-108 (109)
10 2yy9_A Zinc finger and BTB dom 98.2 1.2E-06 4.2E-11 73.4 5.4 99 15-136 26-125 (135)
11 1buo_A POZ domain, protein (pr 98.1 1.7E-05 5.9E-10 64.8 9.7 92 15-130 29-121 (121)
12 3htm_A Speckle-type POZ protei 98.1 2.3E-05 7.7E-10 66.8 10.8 104 16-138 36-140 (172)
13 2if5_A Zinc finger and BTB dom 98.0 3.7E-05 1.3E-09 62.4 10.5 94 14-126 25-119 (120)
14 1r29_A B-cell lymphoma 6 prote 98.0 4.5E-05 1.5E-09 62.6 10.6 94 14-127 29-124 (127)
15 2vpk_A Myoneurin; transcriptio 97.9 7.3E-05 2.5E-09 60.4 10.5 92 15-127 23-115 (116)
16 2q81_A MIZ-1 protein; BTB/POZ 97.9 6.5E-05 2.2E-09 61.3 9.6 89 15-127 28-117 (119)
17 2ppi_A Gigaxonin; BTB domain, 97.9 4.4E-05 1.5E-09 64.8 8.5 94 15-126 48-143 (144)
18 4eoz_A Speckle-type POZ protei 97.9 1.5E-05 5E-10 66.1 5.4 101 15-134 26-127 (145)
19 3ga1_A Nucleus accumbens-assoc 97.9 2.3E-05 7.9E-10 64.8 6.5 92 15-128 34-126 (129)
20 3b84_A Zinc finger and BTB dom 97.8 4E-05 1.4E-09 62.6 7.6 90 15-127 25-115 (119)
21 2z8h_A Transcription regulator 97.8 7.1E-05 2.4E-09 62.6 7.9 97 15-131 37-134 (138)
22 3hve_A Gigaxonin; ubiquitin, c 97.6 0.00013 4.5E-09 66.6 8.0 107 14-138 31-139 (256)
23 3hqi_A Speckle-type POZ protei 97.6 0.00026 8.9E-09 66.3 9.9 105 15-138 175-280 (312)
24 3ohu_A Transcription regulator 97.6 3.1E-05 1.1E-09 63.4 2.9 90 15-124 33-123 (125)
25 3i3n_A Kelch-like protein 11; 97.5 0.00012 4.1E-09 67.8 6.9 108 15-139 33-148 (279)
26 3m5b_A Zinc finger and BTB dom 97.5 0.00014 4.9E-09 60.0 5.6 86 15-128 31-117 (119)
27 2ihc_A Transcription regulator 97.3 0.00012 4E-09 60.2 3.6 92 15-126 30-122 (124)
28 3fkc_A Transcriptional regulat 97.2 0.00081 2.8E-08 54.8 7.1 83 15-120 32-115 (116)
29 3drz_A BTB/POZ domain-containi 76.8 11 0.00038 30.2 8.1 96 14-127 5-105 (107)
30 3drx_A BTB/POZ domain-containi 47.5 23 0.00078 32.2 5.1 98 14-129 11-113 (202)
31 1s1g_A Potassium voltage-gated 31.2 45 0.0015 27.6 4.0 93 14-125 12-107 (124)
32 2k9n_A MYB24; R2R3 domain, DNA 26.4 35 0.0012 27.0 2.4 35 124-158 25-66 (107)
33 2dim_A Cell division cycle 5-l 21.8 37 0.0013 24.9 1.6 30 124-153 33-69 (70)
34 1wgx_A KIAA1903 protein; MYB D 21.2 49 0.0017 25.4 2.2 40 100-143 15-54 (73)
35 1gv2_A C-MYB, MYB proto-oncoge 21.1 34 0.0012 26.8 1.3 36 123-158 27-69 (105)
36 3mkl_A HTH-type transcriptiona 20.8 2.7E+02 0.0091 21.6 6.7 79 63-146 4-85 (120)
No 1
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=100.00 E-value=1.2e-44 Score=323.02 Aligned_cols=149 Identities=24% Similarity=0.444 Sum_probs=130.0
Q ss_pred CCC-CceEEEEeCCCCEEEecHHHHHHcHHHHHHHhhcCCCC---CCCcccccCCCCCHHHHHHHHHHHhhcCCCCC---
Q 018337 11 PEM-KSYIWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGS---SKNYAISLPQRVNPAIFGLVLDYCRFHQVPGR--- 83 (357)
Q Consensus 11 ~~~-s~~IkL~SsDG~iF~Vs~eaA~qS~tIr~mLed~g~g~---~~~~~IPLP~nVsS~iLkkIIEYCe~Hk~~~~--- 83 (357)
|.| +++|+|+|+||++|.|+..+|++|++|++||.+.|... ....+|||| +|++.+|++||+||+||+..+.
T Consensus 2 ~~m~~~~i~L~SsDG~~F~V~~~vA~~S~tIk~ml~~~~~~~~~~~~~~~Iplp-nV~s~iL~kVieyc~~h~~~~~~~~ 80 (169)
T 3v7d_A 2 AHMVTSNVVLVSGEGERFTVDKKIAERSLLLKNYLNDMGDDDDEDDDEIVMPVP-NVRSSVLQKVIEWAEHHRDSNFPDE 80 (169)
T ss_dssp ----CCEEEEECTTCCEEEEEHHHHTTSHHHHHHHHC-----------CEEECT-TCCHHHHHHHHHHHHHTTTCCCCC-
T ss_pred CCCCCCeEEEEeCCCCEEEecHHHHHHhHHHHHHHHhcCcccccccCCCceeeC-CCCHHHHHHHHHHHHHcccCCCccc
Confidence 344 67999999999999999999999999999999776421 123789999 8999999999999999997531
Q ss_pred ------CccccccccccccccChHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCHHHHHhHcCCCCCCChHhhhccc
Q 018337 84 ------SNKERKMFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPL 157 (357)
Q Consensus 84 ------s~~ei~~WD~eFL~iD~~~L~eLI~AAnyLdIk~LldL~c~~VA~~IkGKTpEEIRk~FgI~eD~TpEEE~Eil 157 (357)
....++.||++|++++..+||+||.|||||+|++|+++||++||++|+||||+|||++|||++||||||+++++
T Consensus 81 ~~~~~~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ikgktpeeiR~~f~I~nd~t~eEe~~ir 160 (169)
T 3v7d_A 81 DDDDSRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVNDFTPEEEAAIR 160 (169)
T ss_dssp -------CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCHHHHHHHHTCCCCCCHHHHHHHH
T ss_pred ccccccccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHHHHHHHH
Confidence 23468999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccc
Q 018337 158 NNV 160 (357)
Q Consensus 158 k~~ 160 (357)
+++
T Consensus 161 ~en 163 (169)
T 3v7d_A 161 REN 163 (169)
T ss_dssp TTC
T ss_pred Hhc
Confidence 865
No 2
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=100.00 E-value=3e-42 Score=304.07 Aligned_cols=142 Identities=35% Similarity=0.561 Sum_probs=83.2
Q ss_pred CceEEEEeCCCCEEEecHHHHHHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHhhcCCCC-----------
Q 018337 14 KSYIWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPG----------- 82 (357)
Q Consensus 14 s~~IkL~SsDG~iF~Vs~eaA~qS~tIr~mLed~g~g~~~~~~IPLP~nVsS~iLkkIIEYCe~Hk~~~----------- 82 (357)
+++|+|+|+||++|.|++.+|++|++|++|+.+.+ ...+|||| +|++.+|++||+||+||+..+
T Consensus 3 ~~~v~L~SsDg~~f~v~~~vA~~S~~ik~ml~~~~----~~~~Ipl~-~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~ 77 (160)
T 2p1m_A 3 AKKIVLKSSDGESFEVEEAVALESQTIAHMVEDDC----VDNGVPLP-NVTSKILAKVIEYCKRHVEAAASKAEAVEGAA 77 (160)
T ss_dssp -----CCC---------CHHHHTCTTTC----------------CCT-TSCHHHHHHHHHC-------------------
T ss_pred CCEEEEEcCCCCEEEECHHHHHHhHHHHHHHHccC----CCCceeCC-cCcHHHHHHHHHHHHHcccCCCcccccccccc
Confidence 46899999999999999999999999999998754 24589999 899999999999999999642
Q ss_pred CCccccccccccccccChHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCHHHHHhHcCCCCCCChHhhhcccccc
Q 018337 83 RSNKERKMFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLNNV 160 (357)
Q Consensus 83 ~s~~ei~~WD~eFL~iD~~~L~eLI~AAnyLdIk~LldL~c~~VA~~IkGKTpEEIRk~FgI~eD~TpEEE~Eilk~~ 160 (357)
.....++.||++|++++..+||+||.||+||+|++|+++||++||++|+||||+|||++|||++||||||++++++++
T Consensus 78 ~~~~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeir~~f~I~nd~t~eEe~~ir~en 155 (160)
T 2p1m_A 78 TSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRREN 155 (160)
T ss_dssp -----------------------CHHHHHHTTCHHHHHHHHHHHHHTTTTCCHHHHHHHTTCCCCCCHHHHHHHHHHH
T ss_pred cccchhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHHHHHHHHHhC
Confidence 234568899999999999999999999999999999999999999999999999999999999999999999998854
No 3
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=100.00 E-value=1.7e-40 Score=291.71 Aligned_cols=144 Identities=35% Similarity=0.572 Sum_probs=128.7
Q ss_pred eEEEEeCCCCEEEecHHHHHHcHHHHHHHhhcCCC-CCCCcccccCCCCCHHHHHHHHHHHhhcCCCC----------CC
Q 018337 16 YIWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMG-SSKNYAISLPQRVNPAIFGLVLDYCRFHQVPG----------RS 84 (357)
Q Consensus 16 ~IkL~SsDG~iF~Vs~eaA~qS~tIr~mLed~g~g-~~~~~~IPLP~nVsS~iLkkIIEYCe~Hk~~~----------~s 84 (357)
.|+|+|+||++|.|++.+|.+|++|++|+.+.|+. .....+|||| +|++.+|++||+||+||+..+ ..
T Consensus 2 ~v~L~ssDg~~f~v~~~vA~~S~~i~~m~~~~~~~~e~~~~~Ipl~-~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~~ 80 (159)
T 2ast_A 2 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLP-NVNAAILKKVIQWCTHHKDDPPPPEDDENKEKR 80 (159)
T ss_dssp EEEEECTTSCEEEEEHHHHHTCHHHHHHTTSSCSS------CEECT-TSCHHHHHHHHHHHHHTTTCCC-----------
T ss_pred eEEEEcCCCCEEEeCHHHHHHhHHHHHHHHhcCCcccccCCCcCCC-CccHHHHHHHHHHHHHcCcCCCCcccccccccc
Confidence 49999999999999999999999999999876654 3345789999 899999999999999999643 12
Q ss_pred ccccccccccccccChHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCHHHHHhHcCCCCCCChHhhhcccccc
Q 018337 85 NKERKMFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLNNV 160 (357)
Q Consensus 85 ~~ei~~WD~eFL~iD~~~L~eLI~AAnyLdIk~LldL~c~~VA~~IkGKTpEEIRk~FgI~eD~TpEEE~Eilk~~ 160 (357)
...++.||++|++++...|++|+.||+||+|++|+++||++||++|+||||+|||++|||++||||||++++++++
T Consensus 81 ~~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt~eeir~~f~I~~d~t~eEe~~ir~en 156 (159)
T 2ast_A 81 TDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKEN 156 (159)
T ss_dssp CCCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCCHHHHHHHTTCCCCSCTTHHHHHHHHT
T ss_pred hhhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHHHHHHHHHhC
Confidence 4568999999999999999999999999999999999999999999999999999999999999999999998865
No 4
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=100.00 E-value=3.5e-40 Score=285.46 Aligned_cols=130 Identities=36% Similarity=0.598 Sum_probs=110.4
Q ss_pred ceEEEEeCCCCEEEecHHHHHHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHhhcCCCC----------CC
Q 018337 15 SYIWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPG----------RS 84 (357)
Q Consensus 15 ~~IkL~SsDG~iF~Vs~eaA~qS~tIr~mLed~g~g~~~~~~IPLP~nVsS~iLkkIIEYCe~Hk~~~----------~s 84 (357)
+.|+|+|+||++|.|++.+|++|++|++|+++.| +.+|||| +|++.+|++||+||+||+..+ ..
T Consensus 2 ~~v~L~SsDg~~f~v~~~vA~~S~~ik~ml~~~~-----~~~Ipl~-~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~ 75 (141)
T 1fs1_B 2 PSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLG-----MDPVPLP-NVNAAILKKVIQWCTHHKDDPPPPEDDENKEKR 75 (141)
T ss_dssp CEEEEECTTSCEEEEEGGGGGTCHHHHHHHHHTC-----CSSEECT-TCCHHHHHHHHHHHHHHTTCC------------
T ss_pred CeEEEEeCCCCEEEecHHHHHHhHHHHHHHHhcC-----CCceecC-CcCHHHHHHHHHHHHHhccCCCccccccccccc
Confidence 4699999999999999999999999999999864 4589999 899999999999999999643 12
Q ss_pred ccccccccccccccChHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCHHHHHhHcCCCCCCCh
Q 018337 85 NKERKMFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTE 150 (357)
Q Consensus 85 ~~ei~~WD~eFL~iD~~~L~eLI~AAnyLdIk~LldL~c~~VA~~IkGKTpEEIRk~FgI~eD~Tp 150 (357)
...+++||++|++++...||+||.||+||+|++|+++||++||++|+||||+|||++|||++||||
T Consensus 76 ~~~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeiR~~f~I~~d~tp 141 (141)
T 1fs1_B 76 TDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTE 141 (141)
T ss_dssp -----HHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCHHHHHHHTC-------
T ss_pred hhhhhHHHHHHHhCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCC
Confidence 456899999999999999999999999999999999999999999999999999999999999997
No 5
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=99.90 E-value=1.6e-24 Score=176.64 Aligned_cols=94 Identities=19% Similarity=0.221 Sum_probs=79.9
Q ss_pred eEEEEeCCCCEEEecHHHHHHcHHHHHHHhhcCC-CCCCCcccccCCCCCHHHHHHHHHHHhhcCCCCCCcccccccccc
Q 018337 16 YIWVQTTDGSIQQVEEEVAMFCPMICREIIQTGM-GSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFDEK 94 (357)
Q Consensus 16 ~IkL~SsDG~iF~Vs~eaA~qS~tIr~mLed~g~-g~~~~~~IPLP~nVsS~iLkkIIEYCe~Hk~~~~s~~ei~~WD~e 94 (357)
+|+|+|+||++|.|++++|++|++|++|+.+.|. .+....+|||| +|++.+|++||+||+||+..+.+..++++|
T Consensus 2 ~v~L~SsDg~~f~V~~~~A~~S~~ik~ml~~~~~~~e~~~~~Ipl~-~V~~~iL~kVieyc~~h~~~~~~~~~i~~w--- 77 (96)
T 2fnj_C 2 YVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFR-EIPSHVLSKVCMYFTYKVRYTNSSTEIPEF--- 77 (96)
T ss_dssp EEEEECTTSCEEEEEHHHHTTSHHHHHHHHCC--------CEEECS-SCCHHHHHHHHHHHHHHHHHHSCCSCCCCC---
T ss_pred eEEEEecCCCEEEeCHHHHHHhHHHHHHHHccCCcccccCCceeCC-CCCHHHHHHHHHHHHHccccCCCcccCCCc---
Confidence 7999999999999999999999999999998664 23234689999 899999999999999999654345568888
Q ss_pred ccccChHHHHHHHhhcccCCC
Q 018337 95 FIRMDTKKLCELTSAADSLQL 115 (357)
Q Consensus 95 FL~iD~~~L~eLI~AAnyLdI 115 (357)
++|..+||+||.|||||+|
T Consensus 78 --~vd~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 78 --PIAPEIALELLMAANFLDC 96 (96)
T ss_dssp --CCCTTTHHHHHHHHHHHTC
T ss_pred --ccCHHHHHHHHHHHHHhCc
Confidence 6899999999999999997
No 6
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=99.90 E-value=2.4e-24 Score=180.84 Aligned_cols=96 Identities=19% Similarity=0.210 Sum_probs=81.4
Q ss_pred CceEEEEeCCCCEEEecHHHHHHcHHHHHHHhhcCC-CCCCCcccccCCCCCHHHHHHHHHHHhhcCCCCCCcccccccc
Q 018337 14 KSYIWVQTTDGSIQQVEEEVAMFCPMICREIIQTGM-GSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFD 92 (357)
Q Consensus 14 s~~IkL~SsDG~iF~Vs~eaA~qS~tIr~mLed~g~-g~~~~~~IPLP~nVsS~iLkkIIEYCe~Hk~~~~s~~ei~~WD 92 (357)
+++|+|+|+||++|.|++++|++|++|++||.+.|. .+....+|||| +|++.+|++||+||+||+....+..++++|
T Consensus 16 ~~~v~L~SsDG~~F~V~~~~A~~S~tIk~ml~~~~~~~e~~~~~Iplp-nV~s~iL~kVieyc~~h~~~~~~~~~i~~w- 93 (112)
T 1vcb_B 16 AMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFR-EIPSHVLSKVCMYFTYKVRYTNSSTEIPEF- 93 (112)
T ss_dssp -CEEEEECTTSCEEEEEHHHHHTSHHHHHHSSCC--------CEEECS-SCCHHHHHHHHHHHHHHHHHSSCSSCCCCC-
T ss_pred CCEEEEEcCCCCEEEECHHHHHHhHHHHHHHHhcCCcccccCCceeCC-CCCHHHHHHHHHHHHHhhhccCCcCCCCCc-
Confidence 779999999999999999999999999999997654 22234689999 899999999999999999754455678888
Q ss_pred ccccccChHHHHHHHhhcccCCC
Q 018337 93 EKFIRMDTKKLCELTSAADSLQL 115 (357)
Q Consensus 93 ~eFL~iD~~~L~eLI~AAnyLdI 115 (357)
+++..+||+||.|||||+|
T Consensus 94 ----~vd~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 94 ----PIAPEIALELLMAANFLDC 112 (112)
T ss_dssp ----CCCHHHHHHHHHHHHHHTC
T ss_pred ----ccCHHHHHHHHHHHHHhCc
Confidence 6899999999999999997
No 7
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=99.89 E-value=2.1e-24 Score=177.00 Aligned_cols=94 Identities=19% Similarity=0.279 Sum_probs=82.2
Q ss_pred CceEEEEeCCCCEEEecHHHHHHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHhhcCCCC---CCcccccc
Q 018337 14 KSYIWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPG---RSNKERKM 90 (357)
Q Consensus 14 s~~IkL~SsDG~iF~Vs~eaA~qS~tIr~mLed~g~g~~~~~~IPLP~nVsS~iLkkIIEYCe~Hk~~~---~s~~ei~~ 90 (357)
+.+|+|+|+||++|.|++++|++|++|++|+++ |+ .+...+|||| +|++.+|++||+||+||+.++ .....+++
T Consensus 3 ~~~v~L~SsDg~~f~V~~~vA~~S~~ik~ml~~-~~-e~~~~~Iplp-~V~~~iL~kVieyc~~h~~~~~~~~~~~~i~~ 79 (99)
T 1hv2_A 3 QDFVTLVSKDDKEYEISRSAAMISPTLKAMIEG-PF-RESKGRIELK-QFDSHILEKAVEYLNYNLKYSGVSEDDDEIPE 79 (99)
T ss_dssp CSEEEEEETTTEEEEEEHHHHTTCHHHHHHHHS-ST-TTCTTEEEET-TSCHHHHHHHHHHHHHHHHHHHHCSSCSSCCC
T ss_pred CcEEEEEecCCCEEEECHHHHHHhHHHHHHHhc-cc-ccCCCceecC-CcCHHHHHHHHHHHHHhcccCCCccccccCCC
Confidence 579999999999999999999999999999998 54 2245789999 899999999999999999632 22356788
Q ss_pred ccccccccChHHHHHHHhhcccCCC
Q 018337 91 FDEKFIRMDTKKLCELTSAADSLQL 115 (357)
Q Consensus 91 WD~eFL~iD~~~L~eLI~AAnyLdI 115 (357)
| ++|..+||+||.|||||+|
T Consensus 80 w-----~vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 80 F-----EIPTEMSLELLLAADYLSI 99 (99)
T ss_dssp C-----CCCHHHHHHHHHHHHHHCC
T ss_pred c-----cCCHHHHHHHHHHHHHhCc
Confidence 8 6899999999999999997
No 8
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.84 E-value=1.3e-21 Score=158.97 Aligned_cols=94 Identities=19% Similarity=0.221 Sum_probs=79.6
Q ss_pred eEEEEeCCCCEEEecHHHHHHcHHHHHHHhhcCC-CCCCCcccccCCCCCHHHHHHHHHHHhhcCCCCCCcccccccccc
Q 018337 16 YIWVQTTDGSIQQVEEEVAMFCPMICREIIQTGM-GSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFDEK 94 (357)
Q Consensus 16 ~IkL~SsDG~iF~Vs~eaA~qS~tIr~mLed~g~-g~~~~~~IPLP~nVsS~iLkkIIEYCe~Hk~~~~s~~ei~~WD~e 94 (357)
+|+|+|+||++|.|++.+|.+|++|++|+.+.|. .+....+|||| +|++.+|++||+||+||+..+.+..++++|
T Consensus 3 ~v~L~SsDg~~F~v~r~vA~~S~~ik~m~~~~~~~~E~~~~~I~l~-~V~~~iL~kViey~~~h~~~~~~~~~i~~~--- 78 (97)
T 4ajy_C 3 YVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFR-EIPSHVLSKVCMYFTYKVRYTNSSTEIPEF--- 78 (97)
T ss_dssp EEEEECTTCCEEEEEHHHHTTSHHHHHHHCCC--------CEEECT-TSCHHHHHHHHHHHHHHHHHTTCCSCCCCC---
T ss_pred EEEEEecCCcEEEecHHHHHHhHHHHHHHHhCCCccccCCCceECC-CCCHHHHHHHHHHHHHhcccCCCcCCCCcC---
Confidence 7999999999999999999999999999987542 22246789999 899999999999999998765455678999
Q ss_pred ccccChHHHHHHHhhcccCCC
Q 018337 95 FIRMDTKKLCELTSAADSLQL 115 (357)
Q Consensus 95 FL~iD~~~L~eLI~AAnyLdI 115 (357)
+++.+.||+|+.||+||+.
T Consensus 79 --~i~~~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 79 --PIAPEIALELLMAANFLDC 97 (97)
T ss_dssp --CCCGGGHHHHHHHHHHHTC
T ss_pred --cCCHHHHHHHHHHHhhhCC
Confidence 4899999999999999984
No 9
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=98.31 E-value=3.5e-06 Score=67.11 Aligned_cols=97 Identities=14% Similarity=0.134 Sum_probs=77.8
Q ss_pred CceEEEEeCCC---CEEEecHHHHH-HcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHhhcCCCCCCccccc
Q 018337 14 KSYIWVQTTDG---SIQQVEEEVAM-FCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERK 89 (357)
Q Consensus 14 s~~IkL~SsDG---~iF~Vs~eaA~-qS~tIr~mLed~g~g~~~~~~IPLP~nVsS~iLkkIIEYCe~Hk~~~~s~~ei~ 89 (357)
-+.|+|+..+| +.|.+.+.++. .|+.++.|+.... .... ..|.|| .+++.+++.+++|+..-..+
T Consensus 8 ~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~-~e~~-~~i~l~-~~~~~~f~~~l~~iYt~~~~-------- 76 (109)
T 2vkp_A 8 MADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDL-AEVK-SEIHIP-DVEPAAFLILLKYMYSDEID-------- 76 (109)
T ss_dssp TCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC-------C-CEEEET-TSCHHHHHHHHHHHHHCCCC--------
T ss_pred cccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCc-ccCC-CeEEeC-CCCHHHHHHHHHHHcCCCcc--------
Confidence 45788888886 99999999985 7999999887532 2222 679999 79999999999999875432
Q ss_pred cccccccccChHHHHHHHhhcccCCCchHHHHHHHHHHHH
Q 018337 90 MFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARI 129 (357)
Q Consensus 90 ~WD~eFL~iD~~~L~eLI~AAnyLdIk~LldL~c~~VA~~ 129 (357)
++.+.+.+|+.||++|+++.|.++|++.+...
T Consensus 77 --------~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~ 108 (109)
T 2vkp_A 77 --------LEADTVLATLYAAKKYIVPALAKACVNFLETS 108 (109)
T ss_dssp --------CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred --------CCHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 34567899999999999999999999998764
No 10
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=98.21 E-value=1.2e-06 Score=73.43 Aligned_cols=99 Identities=17% Similarity=0.181 Sum_probs=73.1
Q ss_pred ceEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHhhcCCCCCCccccccccc
Q 018337 15 SYIWVQTTDGSIQQVEEEVAM-FCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFDE 93 (357)
Q Consensus 15 ~~IkL~SsDG~iF~Vs~eaA~-qS~tIr~mLed~g~g~~~~~~IPLP~nVsS~iLkkIIEYCe~Hk~~~~s~~ei~~WD~ 93 (357)
+.|+|+. +|+.|.+.+.++. .|+.++.|+.... ...|.|| .|+..+|+.|++||.....
T Consensus 26 ~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~mf~~~~-----~~~i~l~-~~~~~~f~~lL~fiYtg~~------------- 85 (135)
T 2yy9_A 26 CDATLDV-GGLVFKAHWSVLACCSHFFQRIYGDGT-----GGSVVLP-AGFAEIFGLLLDFFYTGHL------------- 85 (135)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHTCC---------CCEEEC-GGGHHHHHHHHHHHHHSCC-------------
T ss_pred cceEEEE-CCEEEehHHHHHHHhCHHHHHHHcCCC-----CCeEEeC-CCCHHHHHHHHHHHhCCCC-------------
Confidence 4577775 6899999999765 6999998876432 4568998 7999999999999987543
Q ss_pred cccccChHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCHH
Q 018337 94 KFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPE 136 (357)
Q Consensus 94 eFL~iD~~~L~eLI~AAnyLdIk~LldL~c~~VA~~IkGKTpE 136 (357)
.++.+.+.+|+.||++|+|+.|.++|++.+...+.|+++.
T Consensus 86 ---~i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~~~~~ 125 (135)
T 2yy9_A 86 ---ALTSGNRDQVLLAAKELRVPEAVELCQSFQPQTSVGQAQS 125 (135)
T ss_dssp ---CCCTTTHHHHHHHHHHTTCHHHHHHHHHCCC---------
T ss_pred ---CCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccCCCCC
Confidence 2345679999999999999999999999999988887654
No 11
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=98.09 E-value=1.7e-05 Score=64.84 Aligned_cols=92 Identities=17% Similarity=0.196 Sum_probs=76.0
Q ss_pred ceEEEEeCCCCEEEecHHHH-HHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHhhcCCCCCCccccccccc
Q 018337 15 SYIWVQTTDGSIQQVEEEVA-MFCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFDE 93 (357)
Q Consensus 15 ~~IkL~SsDG~iF~Vs~eaA-~qS~tIr~mLed~g~g~~~~~~IPLP~nVsS~iLkkIIEYCe~Hk~~~~s~~ei~~WD~ 93 (357)
+.|+|.. +|+.|.+.+.++ ..|+.++.|+... ...|.|+ .+++.+++.+++|+..-..+
T Consensus 29 ~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~------~~~i~l~-~~~~~~f~~ll~~~Ytg~~~------------ 88 (121)
T 1buo_A 29 CDVVIMV-DSQEFHAHRTVLACTSKMFEILFHRN------SQHYTLD-FLSPKTFQQILEYAYTATLQ------------ 88 (121)
T ss_dssp CCEEEEE-SSCEEEECHHHHHHHCHHHHHHTTSC------CSEEEEC-SSCHHHHHHHHHHHHHSCCC------------
T ss_pred CCEEEEE-CCEEEehhHHHHhhcCHHHHHHHcCC------CcEEEeC-CCCHHHHHHHHHhhcCCCcC------------
Confidence 4577776 689999999987 5799999987642 4578898 79999999999999875432
Q ss_pred cccccChHHHHHHHhhcccCCCchHHHHHHHHHHHHH
Q 018337 94 KFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARII 130 (357)
Q Consensus 94 eFL~iD~~~L~eLI~AAnyLdIk~LldL~c~~VA~~I 130 (357)
++.+.+.+|+.||++|+|+.|.+.|+..+..+|
T Consensus 89 ----~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~I 121 (121)
T 1buo_A 89 ----AKAEDLDDLLYAAEILEIEYLEEQCLKMLETIQ 121 (121)
T ss_dssp ----CCGGGHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred ----CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhC
Confidence 344678999999999999999999999987764
No 12
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=98.09 E-value=2.3e-05 Score=66.81 Aligned_cols=104 Identities=20% Similarity=0.231 Sum_probs=82.3
Q ss_pred eEEEEeCCCCEEEecHHHH-HHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHhhcCCCCCCcccccccccc
Q 018337 16 YIWVQTTDGSIQQVEEEVA-MFCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFDEK 94 (357)
Q Consensus 16 ~IkL~SsDG~iF~Vs~eaA-~qS~tIr~mLed~g~g~~~~~~IPLP~nVsS~iLkkIIEYCe~Hk~~~~s~~ei~~WD~e 94 (357)
.|+|+. +|+.|.+.+.++ ..|+.++.|+... ........|.|| .+++.++..+++|+.....+
T Consensus 36 Dv~l~v-~~~~~~~Hk~iL~~~S~~F~~~f~~~-~~e~~~~~i~l~-~~~~~~f~~~l~~~Yt~~~~------------- 99 (172)
T 3htm_A 36 DCCLCV-AGQEFQAHKAILAARSPVFSAMFEHE-MEESKKNRVEIN-DVEPEVFKEMMCFIYTGKAP------------- 99 (172)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHHHHSC-CCGGGTTEEEEC-SSCHHHHHHHHHHHHHSCCT-------------
T ss_pred ceEEEE-CCEEEEeeHHHHHHcCHHHHHHHccC-ccccCCCeEEec-CCCHHHHHHHHHHHhCCCCC-------------
Confidence 577776 689999999987 4699999998853 222234679999 79999999999999865532
Q ss_pred ccccChHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCHHHH
Q 018337 95 FIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEI 138 (357)
Q Consensus 95 FL~iD~~~L~eLI~AAnyLdIk~LldL~c~~VA~~IkGKTpEEI 138 (357)
++...+.+|+.||++|+|+.|.+.|+..+...+...+.-++
T Consensus 100 ---~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~ 140 (172)
T 3htm_A 100 ---NLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEI 140 (172)
T ss_dssp ---TGGGTHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTTHHHH
T ss_pred ---CcHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhCCHHHHHHH
Confidence 23466889999999999999999999999876666555444
No 13
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=98.03 E-value=3.7e-05 Score=62.36 Aligned_cols=94 Identities=11% Similarity=0.137 Sum_probs=73.8
Q ss_pred CceEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHhhcCCCCCCcccccccc
Q 018337 14 KSYIWVQTTDGSIQQVEEEVAM-FCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFD 92 (357)
Q Consensus 14 s~~IkL~SsDG~iF~Vs~eaA~-qS~tIr~mLed~g~g~~~~~~IPLP~nVsS~iLkkIIEYCe~Hk~~~~s~~ei~~WD 92 (357)
-+.|+|.. +|+.|.+.+.++. .|+.++.|+... ........|.|| .+++.+++.+++|+.....+
T Consensus 25 ~~Dv~l~v-~~~~~~aHk~vLaa~S~~F~~~f~~~-~~e~~~~~i~l~-~~~~~~f~~ll~~~Yt~~~~----------- 90 (120)
T 2if5_A 25 LCDVVILV-EGREFPTHRSVLAACSQYFKKLFTSG-AVVDQQNVYEID-FVSAEALTALMDFAYTATLT----------- 90 (120)
T ss_dssp SCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHC------CCSEEECC-SSCHHHHHHHHHHHHHSCCC-----------
T ss_pred CCCeEEEE-CCEEEeHHHHHHHHhCHHHHHHhcCC-ccccCCceEEeC-CCCHHHHHHHHHHHcCCCCc-----------
Confidence 34677776 5899999999986 699999988743 222235678998 79999999999999865432
Q ss_pred ccccccChHHHHHHHhhcccCCCchHHHHHHHHH
Q 018337 93 EKFIRMDTKKLCELTSAADSLQLKPLVDLTSRAL 126 (357)
Q Consensus 93 ~eFL~iD~~~L~eLI~AAnyLdIk~LldL~c~~V 126 (357)
++.+.+.+|+.||++|+|++|.++|.+.+
T Consensus 91 -----~~~~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 91 -----VSTANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp -----CCGGGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred -----cCHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 34567999999999999999999998765
No 14
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=98.00 E-value=4.5e-05 Score=62.58 Aligned_cols=94 Identities=15% Similarity=0.224 Sum_probs=75.4
Q ss_pred CceEEEEeCCCCEEEecHHHH-HHcHHHHHHHhhcCCCCCCCccccc-CCCCCHHHHHHHHHHHhhcCCCCCCccccccc
Q 018337 14 KSYIWVQTTDGSIQQVEEEVA-MFCPMICREIIQTGMGSSKNYAISL-PQRVNPAIFGLVLDYCRFHQVPGRSNKERKMF 91 (357)
Q Consensus 14 s~~IkL~SsDG~iF~Vs~eaA-~qS~tIr~mLed~g~g~~~~~~IPL-P~nVsS~iLkkIIEYCe~Hk~~~~s~~ei~~W 91 (357)
-+.|+|.. +|+.|.+.+.++ ..|+.++.|+..... . ....|.| + .+++.+++.+++|+..-...
T Consensus 29 ~~Dv~l~v-~~~~~~aHk~iLaa~S~~F~~~f~~~~~-e-~~~~i~l~~-~~~~~~f~~ll~~~Ytg~~~---------- 94 (127)
T 1r29_A 29 LTDVVIVV-SREQFRAHKTVLMACSGLFYSIFTDQLK-R-NLSVINLDP-EINPEGFNILLDFMYTSRLN---------- 94 (127)
T ss_dssp SCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTSTTT-T-TCSEEECCT-TSCHHHHHHHHHHHHHSCCC----------
T ss_pred CCCEEEEE-CCEEEehHHHHHHHhCHHHHHHhcCCcc-C-CCCEEEeCC-CCCHHHHHHHHHHHcCCCcC----------
Confidence 34677776 588999999988 479999998875322 1 3567889 6 79999999999999764431
Q ss_pred cccccccChHHHHHHHhhcccCCCchHHHHHHHHHH
Q 018337 92 DEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALA 127 (357)
Q Consensus 92 D~eFL~iD~~~L~eLI~AAnyLdIk~LldL~c~~VA 127 (357)
++.+.+.+|+.||++|+|+.|.+.|+..+.
T Consensus 95 ------~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~ 124 (127)
T 1r29_A 95 ------LREGNIMAVMATAMYLQMEHVVDTCRKFIK 124 (127)
T ss_dssp ------CCTTTHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ------cCHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 345678999999999999999999998875
No 15
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=97.93 E-value=7.3e-05 Score=60.37 Aligned_cols=92 Identities=15% Similarity=0.141 Sum_probs=71.8
Q ss_pred ceEEEEeCCCCEEEecHHHH-HHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHhhcCCCCCCccccccccc
Q 018337 15 SYIWVQTTDGSIQQVEEEVA-MFCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFDE 93 (357)
Q Consensus 15 ~~IkL~SsDG~iF~Vs~eaA-~qS~tIr~mLed~g~g~~~~~~IPLP~nVsS~iLkkIIEYCe~Hk~~~~s~~ei~~WD~ 93 (357)
+.|+|+. +|+.|.+.+.++ ..|+.++.|+.... ...-.|++| ++++.+++.+++|+..-..+
T Consensus 23 ~Dv~l~v-~~~~~~aHk~vLaa~S~yF~~~f~~~~---~~~i~l~~~-~~~~~~f~~ll~~~Yt~~~~------------ 85 (116)
T 2vpk_A 23 CDCTIVI-GEFQFKAHRNVLASFSEYFGAIYRSTS---ENNVFLDQS-QVKADGFQKLLEFIYTGTLN------------ 85 (116)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTCC---CSCEECCTT-TCCHHHHHHHHHHHHHSCCC------------
T ss_pred CcEEEEE-CCEEEeccHHHHhhcCHHHHHHHcCCC---CCeEEeecC-CCCHHHHHHHHHHHcCCCcc------------
Confidence 4577766 589999999997 57999999887541 122335555 69999999999999864431
Q ss_pred cccccChHHHHHHHhhcccCCCchHHHHHHHHHH
Q 018337 94 KFIRMDTKKLCELTSAADSLQLKPLVDLTSRALA 127 (357)
Q Consensus 94 eFL~iD~~~L~eLI~AAnyLdIk~LldL~c~~VA 127 (357)
++.+.+.+|+.||++|+|+.|.+.|++.+.
T Consensus 86 ----~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 86 ----LDSWNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp ----CCTTTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred ----cCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 345678999999999999999999998763
No 16
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=97.89 E-value=6.5e-05 Score=61.30 Aligned_cols=89 Identities=13% Similarity=0.155 Sum_probs=73.3
Q ss_pred ceEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHhhcCCCCCCccccccccc
Q 018337 15 SYIWVQTTDGSIQQVEEEVAM-FCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFDE 93 (357)
Q Consensus 15 ~~IkL~SsDG~iF~Vs~eaA~-qS~tIr~mLed~g~g~~~~~~IPLP~nVsS~iLkkIIEYCe~Hk~~~~s~~ei~~WD~ 93 (357)
+.|+|+. +|+.|.+.+.++. .|+.++.|+... ...|.++ .+++.+++.+++|+..-..
T Consensus 28 ~Dv~l~v-~~~~~~aHk~vLaa~S~yF~~~f~~~------~~~i~l~-~~~~~~f~~ll~~~Ytg~~------------- 86 (119)
T 2q81_A 28 CDCTFVV-DGVHFKAHKAVLAACSEYFKMLFVDQ------KDVVHLD-ISNAAGLGQVLEFMYTAKL------------- 86 (119)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHHC------CSGGGGG-GCCHHHHHHHHHHHHHSCC-------------
T ss_pred cceEEEE-CCEEEehhHHHHHHcCHHHHHHHcCC------CCEEEeC-CCCHHHHHHHHHHHcCCCC-------------
Confidence 4677775 6899999999875 699999998852 4568888 6999999999999986543
Q ss_pred cccccChHHHHHHHhhcccCCCchHHHHHHHHHH
Q 018337 94 KFIRMDTKKLCELTSAADSLQLKPLVDLTSRALA 127 (357)
Q Consensus 94 eFL~iD~~~L~eLI~AAnyLdIk~LldL~c~~VA 127 (357)
.++.+.+.+|+.||++|+|+.|.+.|+..++
T Consensus 87 ---~i~~~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 87 ---SLSPENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp ---CCCTTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred ---ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 1344568999999999999999999998874
No 17
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=97.87 E-value=4.4e-05 Score=64.78 Aligned_cols=94 Identities=22% Similarity=0.295 Sum_probs=73.4
Q ss_pred ceEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCC-CCCCcccccCCCCCHHHHHHHHHHHhhcCCCCCCcccccccc
Q 018337 15 SYIWVQTTDGSIQQVEEEVAM-FCPMICREIIQTGMG-SSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFD 92 (357)
Q Consensus 15 ~~IkL~SsDG~iF~Vs~eaA~-qS~tIr~mLed~g~g-~~~~~~IPLP~nVsS~iLkkIIEYCe~Hk~~~~s~~ei~~WD 92 (357)
+.|+|+. +|+.|.+.+.++. .|+.++.|+...... ......|.|| +|++.+|+.+++|+..-..
T Consensus 48 ~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~-~v~~~~f~~lL~fiYtg~~------------ 113 (144)
T 2ppi_A 48 CDAHLVL-DGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELE-GISVMVMREILDYIFSGQI------------ 113 (144)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECC-SSCHHHHHHHHHHHTTSCC------------
T ss_pred cceEEEE-CCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeC-CCCHHHHHHHHHHHhCCCC------------
Confidence 4577776 6899999999886 699999998754221 1235679998 7999999999999974332
Q ss_pred ccccccChHHHHHHHhhcccCCCchHHHHHHHHH
Q 018337 93 EKFIRMDTKKLCELTSAADSLQLKPLVDLTSRAL 126 (357)
Q Consensus 93 ~eFL~iD~~~L~eLI~AAnyLdIk~LldL~c~~V 126 (357)
.++.+.+.+|+.||++|+|+.|.++|++.+
T Consensus 114 ----~i~~~~v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 114 ----RLNEDTIQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp ----CCCTTTHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred ----CCCHHHHHHHHHHHHHhCcHHHHHHHHHHh
Confidence 134567899999999999999999998754
No 18
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=97.86 E-value=1.5e-05 Score=66.14 Aligned_cols=101 Identities=19% Similarity=0.216 Sum_probs=73.3
Q ss_pred ceEEEEeCCCCEEEecHHHH-HHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHhhcCCCCCCccccccccc
Q 018337 15 SYIWVQTTDGSIQQVEEEVA-MFCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFDE 93 (357)
Q Consensus 15 ~~IkL~SsDG~iF~Vs~eaA-~qS~tIr~mLed~g~g~~~~~~IPLP~nVsS~iLkkIIEYCe~Hk~~~~s~~ei~~WD~ 93 (357)
+.|+|+. +|+.|.+.+.++ ..|+.++.|+... ........|.|| .+++.+++.+++|+.....+
T Consensus 26 ~Dv~l~v-~~~~~~~Hk~iL~~~S~~F~~~f~~~-~~e~~~~~i~l~-~~~~~~~~~~l~~~Y~~~~~------------ 90 (145)
T 4eoz_A 26 TDCCLCV-AGQEFQAHKAILAARSPVFSAMFEHE-MEESKKNRVEIN-DVEPEVFKEMMCFIYTGKAP------------ 90 (145)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHSS-SHHHHHTEEEEC-SSCHHHHHHHHHHHHHSCCT------------
T ss_pred cceEEEE-CCEEEEeehHHHHHcCHHHHHHHcCC-CcCCCCceEEec-CCCHHHHHHHHHhhccCccC------------
Confidence 4577776 688999999998 4699999988742 211123578998 79999999999999875532
Q ss_pred cccccChHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCC
Q 018337 94 KFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKT 134 (357)
Q Consensus 94 eFL~iD~~~L~eLI~AAnyLdIk~LldL~c~~VA~~IkGKT 134 (357)
++.+.+.+|+.||++|+|+.|.+.|+..+...+...+
T Consensus 91 ----~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n 127 (145)
T 4eoz_A 91 ----NLDKMADDLLAAADKYALERLKVMCEDALCSNLSVEN 127 (145)
T ss_dssp ----TGGGTHHHHHHHHHHTTCHHHHHHHHCC---------
T ss_pred ----CcHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCHHH
Confidence 2345688999999999999999999998876654443
No 19
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=97.86 E-value=2.3e-05 Score=64.76 Aligned_cols=92 Identities=16% Similarity=0.252 Sum_probs=70.0
Q ss_pred ceEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHhhcCCCCCCccccccccc
Q 018337 15 SYIWVQTTDGSIQQVEEEVAM-FCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFDE 93 (357)
Q Consensus 15 ~~IkL~SsDG~iF~Vs~eaA~-qS~tIr~mLed~g~g~~~~~~IPLP~nVsS~iLkkIIEYCe~Hk~~~~s~~ei~~WD~ 93 (357)
+.|+|.. +|+.|.+.+.++. .|+.++.|+... ....|.||.++++.+++.+++|+.....
T Consensus 34 ~Dv~l~v-~~~~~~~Hk~vLaa~S~~F~~~f~~~-----~~~~i~l~~~~~~~~f~~ll~~iYtg~~------------- 94 (129)
T 3ga1_A 34 CDVSVVV-KGHAFKAHRAVLAASSSYFRDLFNNS-----RSAVVELPAAVQPQSFQQILSFCYTGRL------------- 94 (129)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHBHHHHHHHHHC-----CCSEEECCTTCCHHHHHHHHHHHHHSEE-------------
T ss_pred cceEEEE-CCEEEEehHHHHHHcCHHHHHHHcCC-----CCCEEEECCCCCHHHHHHHHHHHhCCcc-------------
Confidence 4577776 7999999999886 699999998864 2567888746999999999999976432
Q ss_pred cccccChHHHHHHHhhcccCCCchHHHHHHHHHHH
Q 018337 94 KFIRMDTKKLCELTSAADSLQLKPLVDLTSRALAR 128 (357)
Q Consensus 94 eFL~iD~~~L~eLI~AAnyLdIk~LldL~c~~VA~ 128 (357)
.++.+.+.+|+.||++|+|+.|.+.|+..+..
T Consensus 95 ---~i~~~~~~~ll~~A~~~~i~~l~~~C~~~L~~ 126 (129)
T 3ga1_A 95 ---SMNVGDQDLLMYTAGFLQIQEIMEKGTEFFLK 126 (129)
T ss_dssp ---ECCTTTHHHHHHHHHHTTBTTSSCC-------
T ss_pred ---ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 24556689999999999999999999988754
No 20
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=97.84 E-value=4e-05 Score=62.58 Aligned_cols=90 Identities=17% Similarity=0.162 Sum_probs=72.6
Q ss_pred ceEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHhhcCCCCCCccccccccc
Q 018337 15 SYIWVQTTDGSIQQVEEEVAM-FCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFDE 93 (357)
Q Consensus 15 ~~IkL~SsDG~iF~Vs~eaA~-qS~tIr~mLed~g~g~~~~~~IPLP~nVsS~iLkkIIEYCe~Hk~~~~s~~ei~~WD~ 93 (357)
+.|+|.. +|+.|.+.+.++. .|+.++.|+.... ...|.|| ++++.+++.+++|+..-...
T Consensus 25 ~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~-----~~~i~l~-~~~~~~f~~ll~~iYtg~~~------------ 85 (119)
T 3b84_A 25 CDATLDV-GGLVFKAHWSVLACCSHFFQSLYGDGS-----GGSVVLP-AGFAEIFGLLLDFFYTGHLA------------ 85 (119)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTTT-----CCCEEEC-GGGHHHHHHHHHHHHHSCCC------------
T ss_pred cceEEEE-CCEEEEeeHHHHhhcCHHHHHHHCCCC-----CCeEEeC-CCCHHHHHHHHHHHcCCCCc------------
Confidence 4577765 6899999999875 6999999887532 4578998 79999999999999865432
Q ss_pred cccccChHHHHHHHhhcccCCCchHHHHHHHHHH
Q 018337 94 KFIRMDTKKLCELTSAADSLQLKPLVDLTSRALA 127 (357)
Q Consensus 94 eFL~iD~~~L~eLI~AAnyLdIk~LldL~c~~VA 127 (357)
++.+.+.+|+.||++|+|+.|.++|+..+.
T Consensus 86 ----~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (119)
T 3b84_A 86 ----LTSGNRDQVLLAARELRVPEAVELCQSFKP 115 (119)
T ss_dssp ----CCTTTHHHHHHHHHHTTCHHHHHHHHHCC-
T ss_pred ----cCHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 344568899999999999999999998764
No 21
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=97.76 E-value=7.1e-05 Score=62.60 Aligned_cols=97 Identities=11% Similarity=0.154 Sum_probs=76.7
Q ss_pred ceEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHhhcCCCCCCccccccccc
Q 018337 15 SYIWVQTTDGSIQQVEEEVAM-FCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFDE 93 (357)
Q Consensus 15 ~~IkL~SsDG~iF~Vs~eaA~-qS~tIr~mLed~g~g~~~~~~IPLP~nVsS~iLkkIIEYCe~Hk~~~~s~~ei~~WD~ 93 (357)
+.|+|+. +|+.|.+.+.++. .|+.++.|+..... +...|.+|..|+...++.|++|+..-...
T Consensus 37 ~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~~---e~~~i~l~~~v~~~~~~~lL~~~Ytg~~~------------ 100 (138)
T 2z8h_A 37 CDVTVLV-EGQRFRAHRSVLAACSSYFHSRIVGQTD---AELTVTLPEEVTVKGFEPLIQFAYTAKLI------------ 100 (138)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTCCC---TTEEEECCTTSCHHHHHHHHHHHHHSCCC------------
T ss_pred cCeEEEE-CCEEEechHHHHHHcCHHHHHHHhcCCC---CCceEEeCCCCCHHHHHHHHHHhcCCCcc------------
Confidence 3577776 5899999999985 69999998875322 24568886569999999999999875432
Q ss_pred cccccChHHHHHHHhhcccCCCchHHHHHHHHHHHHHh
Q 018337 94 KFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIE 131 (357)
Q Consensus 94 eFL~iD~~~L~eLI~AAnyLdIk~LldL~c~~VA~~Ik 131 (357)
++.+.+.+|+.||++|+|+.|.+.|++.+...+.
T Consensus 101 ----i~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~l~ 134 (138)
T 2z8h_A 101 ----LSKDNVDEVCRCVEFLSVHNIEESCFQFLKFKFL 134 (138)
T ss_dssp ----CCTTTHHHHHHHHHHHTCGGGHHHHHHHTTCCCS
T ss_pred ----cCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhcc
Confidence 3456689999999999999999999998865443
No 22
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=97.61 E-value=0.00013 Score=66.57 Aligned_cols=107 Identities=21% Similarity=0.241 Sum_probs=78.5
Q ss_pred CceEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCC-CCCCCcccccCCCCCHHHHHHHHHHHhhcCCCCCCccccccc
Q 018337 14 KSYIWVQTTDGSIQQVEEEVAM-FCPMICREIIQTGM-GSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMF 91 (357)
Q Consensus 14 s~~IkL~SsDG~iF~Vs~eaA~-qS~tIr~mLed~g~-g~~~~~~IPLP~nVsS~iLkkIIEYCe~Hk~~~~s~~ei~~W 91 (357)
-+.|+|.. +|+.|.+.+.++. .|+.++.|+..... .......|.|| +|++.+|+.+++|+..-...
T Consensus 31 ~~Dv~l~v-~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~-~v~~~~f~~ll~~~Yt~~~~---------- 98 (256)
T 3hve_A 31 FCDAHLVL-DGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELE-GISVMVMREILDYIFSGQIR---------- 98 (256)
T ss_dssp CCCEEEEE-TTEEEEECHHHHHTTCHHHHHTC-----------CEEECS-SCCHHHHHHHHHHHHHSCCC----------
T ss_pred CcceEEEE-CCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeC-CCCHHHHHHHHhhccCCCCc----------
Confidence 34677776 6899999999987 59999998764321 11234679999 79999999999999865431
Q ss_pred cccccccChHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCHHHH
Q 018337 92 DEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEI 138 (357)
Q Consensus 92 D~eFL~iD~~~L~eLI~AAnyLdIk~LldL~c~~VA~~IkGKTpEEI 138 (357)
++.+.+.+|+.||++|+|+.|.+.|+..+...+.-.+.-.|
T Consensus 99 ------i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l~~~n~~~i 139 (256)
T 3hve_A 99 ------LNEDTIQDVVQAADLLLLTDLKTLCCEFLEGCIAAENCIGI 139 (256)
T ss_dssp ------CC-CCHHHHHHHHHHHTCHHHHHHHHHHHHHTCCSSTTHHH
T ss_pred ------ccHhHHHHHHHHHHHHChHHHHHHHHHHHHhhCCHhhHHHH
Confidence 34556899999999999999999999999876655544443
No 23
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=97.59 E-value=0.00026 Score=66.29 Aligned_cols=105 Identities=20% Similarity=0.233 Sum_probs=80.2
Q ss_pred ceEEEEeCCCCEEEecHHHH-HHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHhhcCCCCCCccccccccc
Q 018337 15 SYIWVQTTDGSIQQVEEEVA-MFCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFDE 93 (357)
Q Consensus 15 ~~IkL~SsDG~iF~Vs~eaA-~qS~tIr~mLed~g~g~~~~~~IPLP~nVsS~iLkkIIEYCe~Hk~~~~s~~ei~~WD~ 93 (357)
+.|+|.. +|+.|.+.+.++ ..|+.++.|+... +.......|.|+ .+++.+++.+++|+.....+
T Consensus 175 ~Dv~l~v-~~~~f~~Hk~vLaa~S~~F~~~f~~~-~~e~~~~~i~l~-~~~~~~f~~~L~~iYt~~~~------------ 239 (312)
T 3hqi_A 175 TDCCLCV-AGQEFQAHKAILAARSPVFSAMFEHE-MEESKKNRVEIN-DVEPEVFKEMMCFIYTGKAP------------ 239 (312)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHTTC------CCSEEEEC-SSCHHHHHHHHHHHHHSCCT------------
T ss_pred CceEEEE-CCEEEeHHHHHHHHcCHHHHHHhccC-ccccCCceEEec-CCCHHHHHHHHHhhcCCCCC------------
Confidence 4677776 689999999988 5699999987642 222245679998 79999999999999875532
Q ss_pred cccccChHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCHHHH
Q 018337 94 KFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEI 138 (357)
Q Consensus 94 eFL~iD~~~L~eLI~AAnyLdIk~LldL~c~~VA~~IkGKTpEEI 138 (357)
+....+.+|+.||++|+++.|..+|...+...+.-.++-++
T Consensus 240 ----~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~n~~~~ 280 (312)
T 3hqi_A 240 ----NLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEI 280 (312)
T ss_dssp ----THHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTTTHHHH
T ss_pred ----ChHHHHHHHHHHHHHhCHHHHHHHHHHHHHccCCHHHHHHH
Confidence 12378899999999999999999999998766555554443
No 24
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=97.57 E-value=3.1e-05 Score=63.36 Aligned_cols=90 Identities=14% Similarity=0.235 Sum_probs=71.1
Q ss_pred ceEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHhhcCCCCCCccccccccc
Q 018337 15 SYIWVQTTDGSIQQVEEEVAM-FCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFDE 93 (357)
Q Consensus 15 ~~IkL~SsDG~iF~Vs~eaA~-qS~tIr~mLed~g~g~~~~~~IPLP~nVsS~iLkkIIEYCe~Hk~~~~s~~ei~~WD~ 93 (357)
+.|+|+. +|+.|.+.+.++. .|+.++.|+..... +...|.+|..++..+++.+++|+..-..
T Consensus 33 ~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~~---e~~~i~l~~~~~~~~f~~~l~~iYtg~~------------- 95 (125)
T 3ohu_A 33 CDVTLIV-ERKEFRAHRAVLAACSEYFWQALVGQTK---NDLVVSLPEEVTARGFGPLLQFAYTAKL------------- 95 (125)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHBHHHHHHHTTCCC---SSCEEECCTTCCHHHHHHHHHHHTTSEE-------------
T ss_pred cceEEEE-CCEEEechHHHHHHcCHHHHHHhcCCCC---CCcEEEeCCCCCHHHHHHHHHhHcCCce-------------
Confidence 4577775 6899999999986 69999998875322 2567889833999999999999875321
Q ss_pred cccccChHHHHHHHhhcccCCCchHHHHHHH
Q 018337 94 KFIRMDTKKLCELTSAADSLQLKPLVDLTSR 124 (357)
Q Consensus 94 eFL~iD~~~L~eLI~AAnyLdIk~LldL~c~ 124 (357)
.++.+.+.+|+.||++|+|+.|.+.|++
T Consensus 96 ---~~~~~~v~~ll~~A~~l~i~~L~~~C~~ 123 (125)
T 3ohu_A 96 ---LLSRENIREVIRCAEFLRMHNLEDSCFS 123 (125)
T ss_dssp ---EECTTTHHHHHHHHHHHTBSSCTTSSCC
T ss_pred ---EECHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 2455678999999999999999998864
No 25
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=97.55 E-value=0.00012 Score=67.78 Aligned_cols=108 Identities=15% Similarity=0.150 Sum_probs=79.0
Q ss_pred ceEEEEeC--CCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCcccccCC-----CCCHHHHHHHHHHHhhcCCCCCCcc
Q 018337 15 SYIWVQTT--DGSIQQVEEEVAM-FCPMICREIIQTGMGSSKNYAISLPQ-----RVNPAIFGLVLDYCRFHQVPGRSNK 86 (357)
Q Consensus 15 ~~IkL~Ss--DG~iF~Vs~eaA~-qS~tIr~mLed~g~g~~~~~~IPLP~-----nVsS~iLkkIIEYCe~Hk~~~~s~~ 86 (357)
+.|+|... ||+.|.+.+.++. .|+.++.|+.. +........|.||. .|++.++..+++|+.....
T Consensus 33 ~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~-~~~e~~~~~i~l~~~~~~~~v~~~~f~~ll~~~Ytg~~------ 105 (279)
T 3i3n_A 33 CDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSG-QFSESRSGRVEMRKWSSEPGPEPDTVEAVIEYMYTGRI------ 105 (279)
T ss_dssp CCEEEECC----CEEEECHHHHHHHCTTSGGGCCC---------EEECCCCSSTTCSCHHHHHHHHHHHHHSEE------
T ss_pred CCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcC-CCccccCCeEEeccccccCCCCHHHHHHHHHhhCcCCc------
Confidence 46788876 7999999999987 59999987753 22222345677762 5999999999999986442
Q ss_pred ccccccccccccChHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCHHHHH
Q 018337 87 ERKMFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIR 139 (357)
Q Consensus 87 ei~~WD~eFL~iD~~~L~eLI~AAnyLdIk~LldL~c~~VA~~IkGKTpEEIR 139 (357)
.++...+.+|+.||++|+|+.|.+.|+..+...+.-.+.-.|.
T Consensus 106 ----------~i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l~~~n~~~i~ 148 (279)
T 3i3n_A 106 ----------RVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIH 148 (279)
T ss_dssp ----------EEETTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTTHHHHH
T ss_pred ----------ccCHHHHHHHHHHHHHHCcHHHHHHHHHHHHHcCCcchHHHHH
Confidence 2344668999999999999999999999998877666655553
No 26
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=97.46 E-value=0.00014 Score=60.01 Aligned_cols=86 Identities=16% Similarity=0.145 Sum_probs=68.1
Q ss_pred ceEEEEeCCCCEEEecHHHHHH-cHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHhhcCCCCCCccccccccc
Q 018337 15 SYIWVQTTDGSIQQVEEEVAMF-CPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFDE 93 (357)
Q Consensus 15 ~~IkL~SsDG~iF~Vs~eaA~q-S~tIr~mLed~g~g~~~~~~IPLP~nVsS~iLkkIIEYCe~Hk~~~~s~~ei~~WD~ 93 (357)
+.|+|.. +|+.|.+.+.++.. |+.++. ....|.|+ .|++.+|+.+++|+..-..
T Consensus 31 ~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~----------~~~~i~l~-~v~~~~f~~ll~fiYtg~~------------- 85 (119)
T 3m5b_A 31 CDTLITV-GSQEFPAHSLVLAGVSQQLGR----------RGQWALGE-GISPSTFAQLLNFVYGESV------------- 85 (119)
T ss_dssp CCEEEEE-TTEEEEECHHHHHTTCGGGCC----------CEEEECCS-SCCHHHHHHHHHHHTTCCE-------------
T ss_pred cceEEEE-CCEEEeeEHHHHHHcCHHHhc----------CCCEEEeC-CCCHHHHHHHHHHHcCCCc-------------
Confidence 4577776 69999999998865 767652 24568898 7999999999999875331
Q ss_pred cccccChHHHHHHHhhcccCCCchHHHHHHHHHHH
Q 018337 94 KFIRMDTKKLCELTSAADSLQLKPLVDLTSRALAR 128 (357)
Q Consensus 94 eFL~iD~~~L~eLI~AAnyLdIk~LldL~c~~VA~ 128 (357)
.++.+.+.+|+.||++|+|+.|.+.|++++.+
T Consensus 86 ---~i~~~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 86 ---ELQPGELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp ---EECGGGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred ---CcCHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 34667799999999999999999999998754
No 27
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=97.34 E-value=0.00012 Score=60.20 Aligned_cols=92 Identities=12% Similarity=0.192 Sum_probs=71.8
Q ss_pred ceEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHhhcCCCCCCccccccccc
Q 018337 15 SYIWVQTTDGSIQQVEEEVAM-FCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFDE 93 (357)
Q Consensus 15 ~~IkL~SsDG~iF~Vs~eaA~-qS~tIr~mLed~g~g~~~~~~IPLP~nVsS~iLkkIIEYCe~Hk~~~~s~~ei~~WD~ 93 (357)
+.|+|+. +|+.|.+.+.++. .|+.++.|+..... +...|.+|..|+...++.+++|+..-..
T Consensus 30 ~Dv~l~v-~~~~~~aHk~vLaa~S~yF~~mf~~~~~---e~~~i~l~~~v~~~~f~~lL~~iYtg~~------------- 92 (124)
T 2ihc_A 30 CDVTIFV-EGQRFRAHRSVLAACSSYFHSRIVGQAD---GELNITLPEEVTVKGFEPLIQFAYTAKL------------- 92 (124)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHBHHHHHHHTTC------CEEEECCTTSCHHHHHHHHHHHHHSEE-------------
T ss_pred cCEEEEE-CCEEEecHHHHHHHcCHHHHHHHcCCCC---CCceEeecCCcCHHHHHHHHHHhcCCCc-------------
Confidence 4577766 5899999999885 69999998874321 2356888657999999999999986432
Q ss_pred cccccChHHHHHHHhhcccCCCchHHHHHHHHH
Q 018337 94 KFIRMDTKKLCELTSAADSLQLKPLVDLTSRAL 126 (357)
Q Consensus 94 eFL~iD~~~L~eLI~AAnyLdIk~LldL~c~~V 126 (357)
.++.+.+.+|+.||++|+|+.|.+.|++.+
T Consensus 93 ---~i~~~~v~~ll~~A~~~~~~~L~~~C~~~l 122 (124)
T 2ihc_A 93 ---ILSKENVDEVCKCVEFLSVHNIEESCFQFL 122 (124)
T ss_dssp ---EEETTTHHHHHHHHHHHTBSSCCGGGGGTC
T ss_pred ---ccCHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 234566999999999999999999998654
No 28
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=97.19 E-value=0.00081 Score=54.79 Aligned_cols=83 Identities=14% Similarity=0.187 Sum_probs=66.8
Q ss_pred ceEEEEeCCCCEEEecHHHH-HHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHhhcCCCCCCccccccccc
Q 018337 15 SYIWVQTTDGSIQQVEEEVA-MFCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFDE 93 (357)
Q Consensus 15 ~~IkL~SsDG~iF~Vs~eaA-~qS~tIr~mLed~g~g~~~~~~IPLP~nVsS~iLkkIIEYCe~Hk~~~~s~~ei~~WD~ 93 (357)
+.|+|.. +|+.|.+.+.++ ..|+.++.|+... ...|.|| ++++.+++.+++|+..-..+
T Consensus 32 ~Dv~l~v-~~~~f~aHk~vLaa~S~~F~~~f~~~------~~~i~l~-~~~~~~f~~~l~~~Ytg~~~------------ 91 (116)
T 3fkc_A 32 CDVTVIV-EDRKFRAHKNILSASSTYFHQLFSVA------GQVVELS-FIRAEIFAEILNYIYSSKIV------------ 91 (116)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHTTSC------CSEEEEC-SSCHHHHHHHHHHHTTSCCC------------
T ss_pred eeEEEEE-CCEEEehhHHHHHHcCHHHHHHHcCC------CCEEEeC-CCCHHHHHHHHHhhcCCCcC------------
Confidence 4577775 689999999988 4699999987642 4578898 79999999999998754321
Q ss_pred cccccChHHHHHHHhhcccCCCchHHH
Q 018337 94 KFIRMDTKKLCELTSAADSLQLKPLVD 120 (357)
Q Consensus 94 eFL~iD~~~L~eLI~AAnyLdIk~Lld 120 (357)
.++.+.+.+|+.||++|+|+.|.+
T Consensus 92 ---~~~~~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 92 ---RVRSDLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp ---SCCHHHHHHHHHHHHHHTCHHHHT
T ss_pred ---CCCHHHHHHHHHHHHHhCccccCc
Confidence 246678999999999999999975
No 29
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=76.77 E-value=11 Score=30.15 Aligned_cols=96 Identities=15% Similarity=0.234 Sum_probs=64.8
Q ss_pred CceEEEEeCCCCEEEecHHHHHHcH--HHHHHHhhcC-CC--CCCCcccccCCCCCHHHHHHHHHHHhhcCCCCCCcccc
Q 018337 14 KSYIWVQTTDGSIQQVEEEVAMFCP--MICREIIQTG-MG--SSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKER 88 (357)
Q Consensus 14 s~~IkL~SsDG~iF~Vs~eaA~qS~--tIr~mLed~g-~g--~~~~~~IPLP~nVsS~iLkkIIEYCe~Hk~~~~s~~ei 88 (357)
+..|+|.= .|+.|.++...+..-+ .+..|+.... .. ......+=+ +-++.++..|+.|++.-+-.-+
T Consensus 5 ~~~v~LNV-GG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi--DRdp~~F~~IL~~lr~g~l~~p----- 76 (107)
T 3drz_A 5 SKWVRLNV-GGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI--DRDPTYFGPVLNYLRHGKLVIN----- 76 (107)
T ss_dssp CCEEEEEE-TTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE--CSCHHHHHHHHHHHHHSCCCCC-----
T ss_pred CCEEEEEE-CCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe--cCChHHHHHHHHHhCCCeeCCC-----
Confidence 44566555 4999999999997643 6777654321 10 112334555 5899999999999998654211
Q ss_pred ccccccccccChHHHHHHHhhcccCCCchHHHHHHHHHH
Q 018337 89 KMFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALA 127 (357)
Q Consensus 89 ~~WD~eFL~iD~~~L~eLI~AAnyLdIk~LldL~c~~VA 127 (357)
. .+. ...|...|.|.+|.+|+.++-..|.
T Consensus 77 -~------~~~---~~~l~~Ea~fy~l~~L~~~l~~~i~ 105 (107)
T 3drz_A 77 -K------DLA---EEGVLEEAEFYNITSLIKLVKDKIR 105 (107)
T ss_dssp -T------TSC---HHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred -C------CCC---HHHHHHHHHHCCCHHHHHHHHHHHh
Confidence 1 011 2457889999999999999987764
No 30
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=47.49 E-value=23 Score=32.19 Aligned_cols=98 Identities=14% Similarity=0.230 Sum_probs=65.4
Q ss_pred CceEEEEeCCCCEEEecHHHHHHcH--HHHHHHhhc-CCC--CCCCcccccCCCCCHHHHHHHHHHHhhcCCCCCCcccc
Q 018337 14 KSYIWVQTTDGSIQQVEEEVAMFCP--MICREIIQT-GMG--SSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKER 88 (357)
Q Consensus 14 s~~IkL~SsDG~iF~Vs~eaA~qS~--tIr~mLed~-g~g--~~~~~~IPLP~nVsS~iLkkIIEYCe~Hk~~~~s~~ei 88 (357)
+..|+|-= .|..|.+....+..-+ .+..|+... .+. .+....+=+ +-++.++..|+.|++.-.-+-
T Consensus 11 ~~~V~LNV-GG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI--DRDP~~F~~ILnyLRtG~L~l------ 81 (202)
T 3drx_A 11 SKWVRLNV-GGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI--DRDPTYFGPVLNYLRHGKLVI------ 81 (202)
T ss_dssp CCEEEEEE-TTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE--CSCSTTHHHHHHHHHHSCCCC------
T ss_pred CCEEEEEE-CCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe--cCChHHHHHHHHHhcCCccCC------
Confidence 55666655 4999999988887643 566665422 111 112334555 578999999999999755321
Q ss_pred ccccccccccChHHHHHHHhhcccCCCchHHHHHHHHHHHH
Q 018337 89 KMFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARI 129 (357)
Q Consensus 89 ~~WD~eFL~iD~~~L~eLI~AAnyLdIk~LldL~c~~VA~~ 129 (357)
+. .+. ...|...|.|.+|.+|+.++-..+...
T Consensus 82 P~------~~~---~~~l~eEA~FygL~~Lv~~l~~~i~er 113 (202)
T 3drx_A 82 NK------DLA---EEGVLEEAEFYNITSLIKLVKDKIRER 113 (202)
T ss_dssp CT------TSC---HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CC------CCC---HHHHHHHHHHCCcHHHHHHHHHHHHHH
Confidence 11 011 135788999999999999998888653
No 31
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=31.19 E-value=45 Score=27.64 Aligned_cols=93 Identities=11% Similarity=0.072 Sum_probs=57.9
Q ss_pred CceEEEEeCCCCEEEecHHHHHHcH--HHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHhhcCCCCCCccccccc
Q 018337 14 KSYIWVQTTDGSIQQVEEEVAMFCP--MICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKMF 91 (357)
Q Consensus 14 s~~IkL~SsDG~iF~Vs~eaA~qS~--tIr~mLed~g~g~~~~~~IPLP~nVsS~iLkkIIEYCe~Hk~~~~s~~ei~~W 91 (357)
...|+| --.|..|.++...+..-+ ++.. .............+-+ +-++..++.|+.|++.-+-. ++.
T Consensus 12 ~~~V~L-NVGG~~F~t~~~TL~~~p~S~L~~-~~~~~~~~~~~g~~Fi--DRdp~~F~~ILnflR~G~l~------~p~- 80 (124)
T 1s1g_A 12 DELIVL-NVSGRRFQTWRTTLERYPDTLLGS-TEKEFFFNEDTKEYFF--DRDPEVFRCVLNFYRTGKLH------YPR- 80 (124)
T ss_dssp CCEEEE-EETTEEEEEEHHHHTTSTTSSTTS-SGGGGTBCSSSCSEEE--CSCHHHHHHHHHHHHHSCBC------CCT-
T ss_pred CCEEEE-EeCCEEEEEeHHHHhcCCCceecc-cCCcccccCCCCcEEE--cCChHHHHHHHHHHhcCCCC------CCC-
Confidence 445554 445999999998886532 1111 0000011112344555 47999999999999985432 111
Q ss_pred cccccccChHHHHHHHhhcccCCCchH-HHHHHHH
Q 018337 92 DEKFIRMDTKKLCELTSAADSLQLKPL-VDLTSRA 125 (357)
Q Consensus 92 D~eFL~iD~~~L~eLI~AAnyLdIk~L-ldL~c~~ 125 (357)
.+ .+-.|...|.|.+|.+| ++.||..
T Consensus 81 -----~~---~~~~l~~Ea~fy~i~~l~l~~cC~~ 107 (124)
T 1s1g_A 81 -----YE---CISAYDDELAFYGILPEIIGDCCYE 107 (124)
T ss_dssp -----TS---CHHHHHHHHHHTTCCGGGBCHHHHH
T ss_pred -----Cc---CHHHHHHHHHHcCCChHHHHHHHHH
Confidence 01 25778999999999998 4888854
No 32
>2k9n_A MYB24; R2R3 domain, DNA-binding, nucleus, DNA binding protein; NMR {Trichomonas vaginalis} PDB: 2kdz_A
Probab=26.38 E-value=35 Score=27.04 Aligned_cols=35 Identities=20% Similarity=0.374 Sum_probs=26.5
Q ss_pred HHHHHHHhCCCHHHHHhHcC------C-CCCCChHhhhcccc
Q 018337 124 RALARIIEGKTPEEIRETFH------L-PDDLTEEEKLEPLN 158 (357)
Q Consensus 124 ~~VA~~IkGKTpEEIRk~Fg------I-~eD~TpEEE~Eilk 158 (357)
..||..+.|+|+.++|+.+. | ...+|+||...++.
T Consensus 25 ~~Ia~~~~~Rt~~qcr~Rw~~~L~p~i~~~~WT~eEd~~L~~ 66 (107)
T 2k9n_A 25 IRISQLMITRNPRQCRERWNNYINPALRTDPWSPEEDMLLDQ 66 (107)
T ss_dssp HHHHHHTTTSCHHHHHHHHHHHSSSCCTTCCCCHHHHHHHHH
T ss_pred HHHhhhcCCCCHHHHHHHHHHHHcccccccccCHHHHHHHHH
Confidence 56888889999999999653 2 34799999875543
No 33
>2dim_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.83 E-value=37 Score=24.91 Aligned_cols=30 Identities=7% Similarity=0.275 Sum_probs=22.9
Q ss_pred HHHHHHHhCCCHHHHHhHcC------CC-CCCChHhh
Q 018337 124 RALARIIEGKTPEEIRETFH------LP-DDLTEEEK 153 (357)
Q Consensus 124 ~~VA~~IkGKTpEEIRk~Fg------I~-eD~TpEEE 153 (357)
..||..+.|+|+.++|..+. |. ..+|+||.
T Consensus 33 ~~Ia~~l~~Rt~~qcr~Rw~~~L~p~i~~~~wt~eEd 69 (70)
T 2dim_A 33 SRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSGPSS 69 (70)
T ss_dssp HHHHHHSTTCCHHHHHHHHHHTSCSSSCCCCSCCSCC
T ss_pred HHHHHHhcCCCHHHHHHHHHHHcCCcccCCCCChHhc
Confidence 67888899999999999652 22 35888774
No 34
>1wgx_A KIAA1903 protein; MYB DNA-binding domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=21.17 E-value=49 Score=25.41 Aligned_cols=40 Identities=13% Similarity=0.131 Sum_probs=26.9
Q ss_pred hHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCHHHHHhHcC
Q 018337 100 TKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFH 143 (357)
Q Consensus 100 ~~~L~eLI~AAnyLdIk~LldL~c~~VA~~IkGKTpEEIRk~Fg 143 (357)
...+|+-..|..-.+-+.-. ..||..+-|||++|+++.|.
T Consensus 15 E~k~fe~ALa~~~~~tp~rW----e~IA~~V~gKT~eE~~~hY~ 54 (73)
T 1wgx_A 15 ELQKLHCAFASLPKHKPGFW----SEVAAAVGSRSPEECQRKYM 54 (73)
T ss_dssp HHHHHHHHHHHSCSSSSSHH----HHHHHHTTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCccHH----HHHHHHcCCCCHHHHHHHHH
Confidence 44566666665544444433 56888889999999987654
No 35
>1gv2_A C-MYB, MYB proto-oncogene protein; transcription, DNA binding, ION binding; 1.68A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 PDB: 1mse_C* 1msf_C* 1a5j_A 1idy_A 1idz_A 1mbj_A 1mbk_A
Probab=21.10 E-value=34 Score=26.81 Aligned_cols=36 Identities=25% Similarity=0.380 Sum_probs=26.7
Q ss_pred HHHHHHHHhCCCHHHHHhHcC------C-CCCCChHhhhcccc
Q 018337 123 SRALARIIEGKTPEEIRETFH------L-PDDLTEEEKLEPLN 158 (357)
Q Consensus 123 c~~VA~~IkGKTpEEIRk~Fg------I-~eD~TpEEE~Eilk 158 (357)
=..||..+.|+|+.++|..+. | ...+|+||...++.
T Consensus 27 W~~Ia~~l~~Rt~~qcr~Rw~~~l~p~~~~~~Wt~eEd~~L~~ 69 (105)
T 1gv2_A 27 WSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQ 69 (105)
T ss_dssp HHHHHTTSTTCCHHHHHHHHHHTTCCCCCCCCCCHHHHHHHHH
T ss_pred HHHHhhhhcCCCHHHHHHHHHhccCCcccccCCCHHHHHHHHH
Confidence 356888889999999999653 2 24699998875544
No 36
>3mkl_A HTH-type transcriptional regulator GADX; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.15A {Escherichia coli}
Probab=20.78 E-value=2.7e+02 Score=21.55 Aligned_cols=79 Identities=9% Similarity=0.017 Sum_probs=48.5
Q ss_pred CCHHHHHHHHHHHhhcCCCCCCccccccccccccccChHHHHHHHhhcccCCCchHHHHH-HHHHHHHHh--CCCHHHHH
Q 018337 63 VNPAIFGLVLDYCRFHQVPGRSNKERKMFDEKFIRMDTKKLCELTSAADSLQLKPLVDLT-SRALARIIE--GKTPEEIR 139 (357)
Q Consensus 63 VsS~iLkkIIEYCe~Hk~~~~s~~ei~~WD~eFL~iD~~~L~eLI~AAnyLdIk~LldL~-c~~VA~~Ik--GKTpEEIR 139 (357)
+....+.+|++|+..|.....+ +..+ .+.+.+....|..++... -+.+..++... ......++. +.++.||-
T Consensus 4 ~~~~~~~~~~~~i~~~~~~~~~---~~~l-A~~~~~S~~~l~r~fk~~-G~s~~~~~~~~Rl~~A~~lL~~~~~si~eIA 78 (120)
T 3mkl_A 4 LQPNMRTRVCTVINNNIAHEWT---LARI-ASELLMSPSLLKKKLREE-ETSYSQLLTECRMQRALQLIVIHGFSIKRVA 78 (120)
T ss_dssp -CCCHHHHHHHHHHTSTTSCCC---HHHH-HHHTTCCHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHHTSTTCCHHHHH
T ss_pred ccHHHHHHHHHHHHHhccCCCC---HHHH-HHHHCcCHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHcCCCCHHHHH
Confidence 5567889999999988764322 2222 233567788888888763 33333333333 233334443 67888988
Q ss_pred hHcCCCC
Q 018337 140 ETFHLPD 146 (357)
Q Consensus 140 k~FgI~e 146 (357)
..+|..+
T Consensus 79 ~~~Gf~~ 85 (120)
T 3mkl_A 79 VSCGYHS 85 (120)
T ss_dssp HHTTCSC
T ss_pred HHHCCCC
Confidence 8888664
Done!