Query 018339
Match_columns 357
No_of_seqs 206 out of 1824
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 13:43:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018339.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018339hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1hyo_A Fumarylacetoacetate hyd 100.0 5.1E-75 1.7E-79 583.3 22.2 355 3-357 64-419 (421)
2 3lzk_A Fumarylacetoacetate hyd 100.0 7.9E-62 2.7E-66 478.7 20.0 291 5-356 53-357 (359)
3 3r6o_A 2-hydroxyhepta-2,4-dien 100.0 1.9E-54 6.4E-59 421.4 18.6 229 45-356 85-322 (329)
4 4dbf_A 2-hydroxyhepta-2,4-dien 100.0 6.5E-54 2.2E-58 411.3 17.8 219 45-355 63-288 (288)
5 3rr6_A Putative uncharacterize 100.0 4.3E-53 1.5E-57 401.6 16.4 214 45-355 47-263 (265)
6 2dfu_A Probable 2-hydroxyhepta 100.0 8.6E-50 2.9E-54 379.2 18.9 218 46-356 31-260 (264)
7 3l53_A Putative fumarylacetoac 100.0 1E-49 3.6E-54 370.3 18.0 199 52-309 3-210 (224)
8 1wzo_A HPCE; structural genomi 100.0 2.3E-49 7.8E-54 372.5 19.9 217 45-355 26-245 (246)
9 3s52_A Putative fumarylacetoac 100.0 1.9E-49 6.6E-54 367.8 17.4 212 48-353 7-221 (221)
10 1saw_A Hypothetical protein FL 100.0 2.6E-46 9E-51 347.5 17.3 196 69-356 26-224 (225)
11 1gtt_A 4-hydroxyphenylacetate 100.0 1.8E-46 6E-51 378.3 17.0 215 46-355 207-425 (429)
12 2q18_X 2-keto-3-deoxy-D-arabin 100.0 1.6E-44 5.4E-49 347.6 17.4 221 47-356 58-290 (293)
13 1nkq_A Hypothetical 28.8 kDa p 100.0 8.8E-44 3E-48 337.0 15.7 174 70-298 18-223 (259)
14 1gtt_A 4-hydroxyphenylacetate 100.0 9.1E-43 3.1E-47 351.3 19.6 189 69-315 10-200 (429)
15 2eb4_A 2-OXO-HEPT-3-ENE-1,7-di 100.0 1.5E-37 5.2E-42 295.3 9.2 191 69-353 64-267 (267)
16 2wqt_A 2-keto-4-pentenoate hyd 100.0 5.4E-36 1.8E-40 285.1 15.6 193 65-355 60-263 (270)
17 1tyg_B YJBS; alpha beta barrel 43.5 30 0.001 26.6 4.5 14 321-334 69-82 (87)
18 2cu3_A Unknown function protei 40.6 57 0.002 22.9 5.5 54 251-333 5-58 (64)
19 3l53_A Putative fumarylacetoac 35.4 22 0.00076 32.0 3.0 13 322-334 197-209 (224)
20 2k52_A Uncharacterized protein 34.9 47 0.0016 24.4 4.4 53 279-334 1-56 (80)
21 2k9x_A Tburm1, uncharacterized 32.8 27 0.00092 28.0 2.8 62 265-333 35-96 (110)
No 1
>1hyo_A Fumarylacetoacetate hydrolase; beta-sandwich roll; HET: HBU; 1.30A {Mus musculus} SCOP: b.34.8.1 d.177.1.1 PDB: 1qcn_A 2hzy_A* 1qco_A 1qqj_A
Probab=100.00 E-value=5.1e-75 Score=583.27 Aligned_cols=355 Identities=57% Similarity=1.078 Sum_probs=313.6
Q ss_pred cCcccHHHHHhCCchHHHHHHHHHHHHHhcCchhhhhhhhhccCccccCCCceecCCeeccccccccccHHHHHHhcccc
Q 018339 3 SWQPNLNKFLSLGRPAWKEARDMLQKLLSSNEATLRDNANLRQKSLVPMGKVEMLLPMEIGDYTDFFSSMHHAKNCGTIF 82 (357)
Q Consensus 3 ~~~~~l~~f~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ll~P~~~~~~~~~~~~~~H~~~~g~~~ 82 (357)
|.+++|+.|++.|++.|..+|..++.+++...+.|+++..+.....+++++|+|++|+.+++|++|++|.+|++|+++.+
T Consensus 64 ~~~~tL~~~l~~g~~~~~~~r~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~v~ll~P~~~~~y~df~~~~~Ha~~~g~~~ 143 (421)
T 1hyo_A 64 FDETTLNNFMGLGQAAWKEARASLQNLLSASQARLRDDKELRQRAFTSQASATMHLPATIGDYTDFYSSRQHATNVGIMF 143 (421)
T ss_dssp GGSSSSHHHHHHCHHHHHHHHHHHHHHHTTSSTHHHHCHHHHHHHEEESTTCEEECSSCCSCEEEECCCHHHHHHHHHHH
T ss_pred cCCcCHHHHHhcChHHHHHHHHHHHHHhhccCccccccccccccccccHhHCeEcCCcccCcEEEEechHHHHHHHHhhh
Confidence 67899999999999999999999998877544444444333344568999999999999999999999999999999877
Q ss_pred CCCCCCCCCCCCCCceeeecCCcceecCCCeeecCCCCCCCCCCCCCCCCCCCCceeceEEEEEEcCCCCCCCCCCHHHH
Q 018339 83 RGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPSGNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEA 162 (357)
Q Consensus 83 ~~~~~~~~p~~~~~P~~f~k~~ssv~~~g~~I~~P~~~~~~~~~~~~~~~~~~~ld~E~ELavVIgk~~~~g~~i~~e~A 162 (357)
+++.++.+|+|.+.|++|+|+++|++++|++|.+|.+++.+.+...|.+.++.++|||+||||||||+++.|++|++++|
T Consensus 144 r~~~~~~~p~~~~~Pv~f~k~~ssvv~~g~~I~~P~~~~~~~~~~~p~~~~s~~lD~E~ELavvIG~~~~~g~~v~~~~A 223 (421)
T 1hyo_A 144 RGKENALLPNWLHLPVGYHGRASSIVVSGTPIRRPMGQMRPDNSKPPVYGACRLLDMELEMAFFVGPGNRFGEPIPISKA 223 (421)
T ss_dssp HCGGGCSCTTTTTSCCEEECCSTTEEETTCCEECCEEEECSCTTSCCEEEECSCEECBEEEEEEECSCCCTTCCCCHHHH
T ss_pred ccccccCCCCcCCCCEEEEcccceEEcCCCeEECCCCcccCccccccccccccCceEEEEEEEEECcccccCCCCCHHHH
Confidence 66666678899999999999999999999999999876544444446666789999999999999999777899999999
Q ss_pred hhceeEEEEeecCchhhhhhhhhcCCCCcccccCCCccCCccccccccCCccCCCCCCCCCCCccccccCCcceeEEEEE
Q 018339 163 ADHIFGVMLMNDWSARDIQAWEYVPLGPFLGKSFGTTLSPWIVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEV 242 (357)
Q Consensus 163 ~~~I~Gy~l~nD~saRd~q~~~~~~l~~~~aK~fdt~lGP~ivt~d~l~~~~~~~~~~~~~~~~~~~~~~~~~l~i~l~v 242 (357)
++||+||+++||||+||+|.|++.+++|+++|+|+|++||||||.|++++++...+++||+.++||.++++..+.|.|++
T Consensus 224 ~~~I~Gy~l~ND~SaRdiQ~~e~~plg~~~aK~f~t~iGPwivt~d~l~p~~~~~~~~~~~~l~~l~~~~~~~~~l~l~~ 303 (421)
T 1hyo_A 224 HEHIFGMVLMNDWSARDIQQWEYVPLGPFLGKSFGTTISPWVVPMDALMPFVVPNPKQDPKPLPYLCHSQPYTFDINLSV 303 (421)
T ss_dssp GGGEEEEEEEECCEEHHHHHHHCTTTCCCHHHHTCEEECSCBEEHHHHGGGEECCCCCSSCCCGGGCCCSCCEECCEEEE
T ss_pred HHhhcEEEEEEeccHHhhhhhhcccCCCccccCcCCCCCCeecchhhcccccccccccCCcccccccccCCCccceEEEE
Confidence 99999999999999999999998889999999999999999999999999998889999999999998877766777777
Q ss_pred EEeeCCCCCCeEEEecchhhhhcCHHHHHHHHHHcCcccCCCCEEEcCCCCCCccCCCCceEEEEecCcccccc-CCCCC
Q 018339 243 QIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTINGCNLRSGDLLGTGTISGPEPESLGCLLELTWNGQKPLSL-DGFTR 321 (357)
Q Consensus 243 ~i~~~~~~NGe~~q~~~t~~M~~~~~~lIa~~~S~~~tL~pGDvI~TGTp~Gv~~~~~G~~~e~~i~g~~~l~~-~~~~~ 321 (357)
++|.+.+.||+++|++++++|+|++++||+|++|++++|+|||||+||||+|+++.+.||.+|++++|++++++ .+.++
T Consensus 304 ~vN~~~~~~Ge~~q~~~~~~m~~~~~~lIa~lss~g~tL~pGDlI~TGTpsG~~~~~~G~~lE~~~~G~~~v~l~~g~~~ 383 (421)
T 1hyo_A 304 SLKGEGMSQAATICRSNFKHMYWTMLQQLTHHSVNGCNLRPGDLLASGTISGSDPESFGSMLELSWKGTKAIDVGQGQTR 383 (421)
T ss_dssp EEECTTCSSCEEEEEEETTCCSSCHHHHHHHHHTTSCCCCTTCEEECCCCCCSSGGGCCBHHHHTTTTTSCEECSTTCEE
T ss_pred EEecCCCCCCEEEEecCHHhhcCCHHHHHHHHHHCCCccCCCCEEEcCCCCCCCCCCCcceEEEEecCcceeeccCCCCC
Confidence 66322222399999999999999999999998668999999999999999999999999999999999999988 56678
Q ss_pred cCCCCCCEEEEEEEEeCCCceeeeeeeeeeEeeCCC
Q 018339 322 KFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPSTP 357 (357)
Q Consensus 322 ~~L~~GD~V~~~~~~~~~~~~~~~G~~~~~v~~~~~ 357 (357)
+|||+||+|++++.+..||++||||+|+|+|+++.+
T Consensus 384 ~fL~~GD~V~~~~~~~~~g~~igfG~~~~~V~~a~~ 419 (421)
T 1hyo_A 384 TFLLDGDEVIITGHCQGDGYRVGFGQCAGKVLPALS 419 (421)
T ss_dssp SSCCTTCEEEEEEEEECSSCEEEEEEEEEEEECCC-
T ss_pred ccCCCCCEEEEEEEECCCCceeeeeeeEEEEecCCC
Confidence 999999999999888789999999999999999853
No 2
>3lzk_A Fumarylacetoacetate hydrolase family protein; structural genomics, PSI-2, protein structure initiative; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=7.9e-62 Score=478.68 Aligned_cols=291 Identities=20% Similarity=0.225 Sum_probs=234.5
Q ss_pred cccHHHHHhCCchHHHHHHHHHHHHHhcCchhhhhhhhhccCccccCCCceecCCeecc-ccccccccHHHHHHhccccC
Q 018339 5 QPNLNKFLSLGRPAWKEARDMLQKLLSSNEATLRDNANLRQKSLVPMGKVEMLLPMEIG-DYTDFFSSMHHAKNCGTIFR 83 (357)
Q Consensus 5 ~~~l~~f~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ll~P~~~~-~~~~~~~~~~H~~~~g~~~~ 83 (357)
.++|+.|++.+......+++... .+.. .....+++++++|++|++++ .|.++++|.+|++|+++.+
T Consensus 53 ~~~l~~~l~~w~~~~~~l~~l~~-~l~~-----------~~~~~~~~~~v~ll~Pv~~~~~~~~g~NY~~Ha~e~~~~~- 119 (359)
T 3lzk_A 53 ARTLQAALDDWAHAGPRLERVAE-GIET-----------GAQPTMRFHEHDAASPLPRAFQWADGSAYVNHVELVRKAR- 119 (359)
T ss_dssp CSSHHHHHHTHHHHHHHHHHHHH-HHHH-----------TCSCCEECCGGGBCCSSSSCSCEEEECCCHHHHHHHHHHT-
T ss_pred CcCHHHHHhccHhhHHHHHHHHH-HHhc-----------CCCCCCcCccceEcCCCCCCCEEEEEcCHHHHHHHHHHhc-
Confidence 57999999985543333332111 1111 12345689999999999754 5777788999999998652
Q ss_pred CCCCCCCCCCCCCceeeecCCcceecCCCeeecCCCCCCCCCCCCCCCCCCCCceeceEEEEEEcCCCCCCCCCCHHHHh
Q 018339 84 GPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPSGNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAA 163 (357)
Q Consensus 84 ~~~~~~~p~~~~~P~~f~k~~ssv~~~g~~I~~P~~~~~~~~~~~~~~~~~~~ld~E~ELavVIgk~~~~g~~i~~e~A~ 163 (357)
+ ++.|++|.+.|++|+|+++|+++++++|.+|.. +.++|||+||||||||. |++|++++|+
T Consensus 120 g--~~~p~~~~~~P~~F~k~~ssv~g~~~~I~~P~~--------------s~~lD~E~ELavVIGk~---~~~v~~e~A~ 180 (359)
T 3lzk_A 120 N--AEMPASFWTDPLIYQGGSDSFLGPRDPILMADD--------------AWGIDMEGEAAVIVDDV---PMGATLDEAK 180 (359)
T ss_dssp T--CCCCGGGGTSCCEEEECCSSCBCTTSCEEESCT--------------TSCEECCEEEEEEECCB---CTTCCHHHHH
T ss_pred C--CCCCCcccCccEEEECCCceEECCCCCEECCCC--------------CCCeeEEEEEEEEECCC---CCCCCHHHHH
Confidence 2 235778888999999999999999999999976 78999999999999998 9999999999
Q ss_pred hceeEEEEeecCchhhhhhhhhcC-CCCcccccCCCccCCccccccccCCccCCCCCCCCCCCccccccCCcceeEEEEE
Q 018339 164 DHIFGVMLMNDWSARDIQAWEYVP-LGPFLGKSFGTTLSPWIVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEV 242 (357)
Q Consensus 164 ~~I~Gy~l~nD~saRd~q~~~~~~-l~~~~aK~fdt~lGP~ivt~d~l~~~~~~~~~~~~~~~~~~~~~~~~~l~i~l~v 242 (357)
+||+|||++||||+||+|.+++.+ ++|+++|+| +++||||||+|++++++.. ...++.|+++|
T Consensus 181 ~~I~Gytl~ND~SaRD~Q~~~~~~g~~~~~~K~~-~~~gP~iVt~del~~~~~~---------------~~~~L~l~~~v 244 (359)
T 3lzk_A 181 AAIRLVMLVNDVSLRGLIPGELAKGFGFYQSKPS-SAFSPVAVTPEELGEAWDG---------------GKLHLPLHVDL 244 (359)
T ss_dssp HTEEEEEEEECCEETTTHHHHHHHTSCCSTTSCC-CEECSCEECHHHHGGGBCS---------------SCBCSBEEEEE
T ss_pred hhhcEEEEEEeccHHHhhhhhhccCCCccccccc-cccCCccccHHHcCccccC---------------CccceEEEEEE
Confidence 999999999999999999998754 799999995 6799999999999765421 11357777777
Q ss_pred EEeeCCCCCCeEEEecc-hhhhhcCHHHHHHHHHHcCcccCCCCEEEcCCCCCCccC-----------CCCceEEEEecC
Q 018339 243 QIKPAGKEDSCVVTRSN-FKYLYWTLTQQLAHHTINGCNLRSGDLLGTGTISGPEPE-----------SLGCLLELTWNG 310 (357)
Q Consensus 243 ~i~~~~~~NGe~~q~~~-t~~M~~~~~~lIa~~~S~~~tL~pGDvI~TGTp~Gv~~~-----------~~G~~~e~~i~g 310 (357)
||+++|+++ +++|+|++++||+|+ |+++||+|||||+||||+|+.+- ..||.+|.. +
T Consensus 245 --------NGe~~q~~~~t~~Mif~~~~lIa~l-S~~~tL~pGDvI~TGTpsGv~~~~~~~~~~~~~~G~~~l~E~~--~ 313 (359)
T 3lzk_A 245 --------NGEPFGRANAGIDMTFDFPQLIVHA-ARTRPLSAGTIIGSGTVSNKLEGGPGRPVSEGGAGYSCIAELR--M 313 (359)
T ss_dssp --------TTEEEECCBTTSSCSSCHHHHHHHH-TTTSCBCTTEEEECCSCCCCBTTBCCCCGGGTSCBCSSHHHHH--H
T ss_pred --------CCEEEEcCcCcccccCCHHHHHHHH-hCCCCcCCCCEEEcCCcCCCCcccccccccccccccccchhhh--h
Confidence 999999999 999999999999998 89999999999999999999542 267888763 2
Q ss_pred ccccccCCCCCcCCCCCCEEEEEEEEeCCCceeeeeeeeeeEeeCC
Q 018339 311 QKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPST 356 (357)
Q Consensus 311 ~~~l~~~~~~~~~L~~GD~V~~~~~~~~~~~~~~~G~~~~~v~~~~ 356 (357)
...+..+..+++|||+||+|++++. ..|| .++||+|+|+|+++.
T Consensus 314 ~~~~~~g~~~~~fL~~GD~V~i~~~-~~~g-~~~~G~l~n~V~~~~ 357 (359)
T 3lzk_A 314 IETIEGGAPKTQFLKFGDVVRIEMK-DRTG-HSIFGAIEQKVGKYE 357 (359)
T ss_dssp HHHHHHSSCCSCCBCTTCEEEEEEB-CTTS-CBSSCCEEEEEEECC
T ss_pred hhhhccCCCCCCcCCCCCEEEEEEE-cCCC-cccccceEEEEEeCC
Confidence 3333333334579999999999943 4566 568999999999864
No 3
>3r6o_A 2-hydroxyhepta-2,4-diene-1, 7-dioateisomerase; ssgcid, struc genomics, seattle structural genomics center for infectious isomerase; 1.95A {Mycobacterium abscessus}
Probab=100.00 E-value=1.9e-54 Score=421.40 Aligned_cols=229 Identities=22% Similarity=0.308 Sum_probs=188.5
Q ss_pred cCccccCCCceecCCeeccc--cccccccHHHHHHhccccCCCCCCCCCCCCCCceeeecCCcceecCCCeeecCCCCCC
Q 018339 45 QKSLVPMGKVEMLLPMEIGD--YTDFFSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFA 122 (357)
Q Consensus 45 ~~~~~~~~~v~ll~P~~~~~--~~~~~~~~~H~~~~g~~~~~~~~~~~p~~~~~P~~f~k~~ssv~~~g~~I~~P~~~~~ 122 (357)
.+..+++++++|++|+..+. +....+|.+|++ ++.. .|. .+.|++|+|+++|+++++++|.+|..
T Consensus 85 ~~~~~~~~~v~llaPv~~p~kI~cvG~NY~~H~~-~g~~--------~P~-~~~P~~F~K~~~s~~g~~~~I~~P~~--- 151 (329)
T 3r6o_A 85 SFEPVPLDSVALGAPIPEPGQVIALGFNYPTHSD-TDSP--------LPK-MADPVVFMKSPTSISGPRDAVIAPRT--- 151 (329)
T ss_dssp ----CBGGGSCBCCSSSSCSCEEEEESCSTTC---------------------CCEEEEECGGGEECTTCCEEECTT---
T ss_pred CCCCccCccceEcCCCCCCCeEEEEcccHHHHHH-hCCC--------CCC-ccCCEEEEcccceEECCCCceECCCC---
Confidence 44568999999999998553 222345889988 5432 232 24899999999999999999999986
Q ss_pred CCCCCCCCCCCCCCceeceEEEEEEcCCCCCCCCCCHHHHhhceeEEEEeecCchhhhhhh---hhc--CCCCcccccCC
Q 018339 123 PSGNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAW---EYV--PLGPFLGKSFG 197 (357)
Q Consensus 123 ~~~~~~~~~~~~~~ld~E~ELavVIgk~~~~g~~i~~e~A~~~I~Gy~l~nD~saRd~q~~---~~~--~l~~~~aK~fd 197 (357)
+.++|||+||||||||. ++++++++|++||+||+++||||+||+|.. .+. ..+|+++|+||
T Consensus 152 -----------~~~~d~E~ELavVIGk~---~~~v~~e~A~~~I~Gytv~NDvSaRd~q~~~g~~~~~~~~~w~~aK~fd 217 (329)
T 3r6o_A 152 -----------SHALDYEIEIAVVIGKP---GYRIERSQAIKHVAGYMLANDITARDVALPFGFGGSPLQAQVVRGKGYP 217 (329)
T ss_dssp -----------CSCEECCEEEEEEECSC---BSSCCGGGGGGGEEEEEEEECCEEHHHHCTTC------CCCHHHHHCST
T ss_pred -----------CCCccEEEEEEEEECCC---CCCCCHHHHHhhheEEEEEEEeEHHHHhhhhcccccccCCccccccCcC
Confidence 78999999999999999 999999999999999999999999999863 111 24689999999
Q ss_pred Cc--cCCccccccccCCccCCCCCCCCCCCccccccCCcceeEEEEEEEeeCCCCCCeEEEecchhhhhcCHHHHHHHHH
Q 018339 198 TT--LSPWIVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHT 275 (357)
Q Consensus 198 t~--lGP~ivt~d~l~~~~~~~~~~~~~~~~~~~~~~~~~l~i~l~v~i~~~~~~NGe~~q~~~t~~M~~~~~~lIa~~~ 275 (357)
++ +|||+||+|++.+ +.++.|+++| ||+++|++++++|+|++++||+|+
T Consensus 218 ~~~plGP~ivt~del~d--------------------~~~l~l~l~v--------NGe~~q~g~t~dMif~~~~lIa~l- 268 (329)
T 3r6o_A 218 TFCPTGPWLFTTGSDTT--------------------FETFDFELRI--------NGELRQSGSTVDMTLGFAEVVETV- 268 (329)
T ss_dssp TSEEBCSCEEECTTCSS--------------------CCCCEEEEEE--------TTEEEEEEEGGGCSSCHHHHHHHH-
T ss_pred cCcccCCeEcChhhcCC--------------------hhhcEEEEEE--------CCEEEEecCHHHhcCCHHHHHHHH-
Confidence 96 9999999999854 3568888888 999999999999999999999998
Q ss_pred HcCcccCCCCEEEcCCCCCCccCCCCceEEEEecCccccccCCCCCcCCCCCCEEEEEEEEeCCCceeeeeeeeeeEeeC
Q 018339 276 INGCNLRSGDLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPS 355 (357)
Q Consensus 276 S~~~tL~pGDvI~TGTp~Gv~~~~~G~~~e~~i~g~~~l~~~~~~~~~L~~GD~V~~~~~~~~~~~~~~~G~~~~~v~~~ 355 (357)
|++++|+|||||+||||+|++.. +.+++||++||+|+++ |. |||+|+|+|+..
T Consensus 269 S~~~tL~pGDvI~TGTp~GvG~~-------------------~~p~~~l~~GD~V~~e--i~------glG~l~n~V~~~ 321 (329)
T 3r6o_A 269 SATIALRAGDIILTGTPGGCGFQ-------------------FDPPRYLRPGDVIEAH--SA------KLGKMRLPVHDE 321 (329)
T ss_dssp HTTSCBCTTCEEECCCCSCCGGG-------------------SSSCCCCCTTCEEEEE--ET------TTEEEEEEEEEC
T ss_pred HcCCCcCCCCEEEcCCccccCCC-------------------CCCCccCCCCCEEEEE--Ec------CceEEEEEEEeC
Confidence 89999999999999999998641 3467899999999999 66 999999999876
Q ss_pred C
Q 018339 356 T 356 (357)
Q Consensus 356 ~ 356 (357)
.
T Consensus 322 ~ 322 (329)
T 3r6o_A 322 K 322 (329)
T ss_dssp C
T ss_pred C
Confidence 4
No 4
>4dbf_A 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; oxaloacetate decarboxylase; 1.90A {Corynebacterium glutamicum} PDB: 4dbh_A
Probab=100.00 E-value=6.5e-54 Score=411.28 Aligned_cols=219 Identities=22% Similarity=0.267 Sum_probs=183.7
Q ss_pred cCccccCCCceecCCeeccccc-cccccHHHHHHhccccCCCCCCCCCCCCCCceeeecCCcceecCCCeeecCCCCCCC
Q 018339 45 QKSLVPMGKVEMLLPMEIGDYT-DFFSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAP 123 (357)
Q Consensus 45 ~~~~~~~~~v~ll~P~~~~~~~-~~~~~~~H~~~~g~~~~~~~~~~~p~~~~~P~~f~k~~ssv~~~g~~I~~P~~~~~~ 123 (357)
++..+++++++|++|+.+.... ...+|.+|++|+++. ++ . ++.|++|+|+++|+++++++|.+|..
T Consensus 63 ~g~~~~~~~v~ll~Pv~p~ki~cvG~NY~~H~~E~~~~-----~~-~---p~~P~~F~K~~~sv~g~~~~I~~P~~---- 129 (288)
T 4dbf_A 63 TGREWPLKDVRLLAPMLPSKVVAIGRNYADHVAEVFKK-----SA-E---SLPPTLFLKPPTAVTGPESPIRIPSF---- 129 (288)
T ss_dssp EEEEEEGGGSEEECSCCCSCEEEEESCBCC--------------------CCCCEEEEECGGGEECTTCCEEECTT----
T ss_pred CCceeecccCeEcCCCCCceEEEEeccHHHHHHHhccC-----CC-C---CCCCEEEEeCcceeeCCCCceECCCC----
Confidence 4567899999999999864321 123488999999841 01 2 26799999999999999999999976
Q ss_pred CCCCCCCCCCCCCceeceEEEEEEcCCCCCCCCCCHHHHhhceeEEEEeecCchhhhhhhhhcCCCCcccccCCCc--cC
Q 018339 124 SGNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYVPLGPFLGKSFGTT--LS 201 (357)
Q Consensus 124 ~~~~~~~~~~~~~ld~E~ELavVIgk~~~~g~~i~~e~A~~~I~Gy~l~nD~saRd~q~~~~~~l~~~~aK~fdt~--lG 201 (357)
+.++|||+|||+||||+ |+++++++|++||+||+++||||+||+|.++. +|+++|+||++ +|
T Consensus 130 ----------~~~~d~E~ELavVIGk~---~~~v~~~~A~~~I~Gytv~nDvsaRd~Q~~~~---~w~~aK~fd~~~plG 193 (288)
T 4dbf_A 130 ----------ATKVEFEGELAVVIGKP---CKNVKADDWKSVVLGFTIINDVSSRDLQFADG---QWARAKGIDTFGPIG 193 (288)
T ss_dssp ----------CCSEECCEEEEEEECSC---BSSCCGGGGGGGEEEEEEEECCEEHHHHHHHS---SSHHHHHSTTCEEEE
T ss_pred ----------CCceeEEEEEEEEECCC---cCCCCHHHHhhheeEEEEEEEeEhHHhhhccC---CccccccCCCCceeC
Confidence 78999999999999999 99999999999999999999999999998764 79999999997 99
Q ss_pred CccccccccCCccCCCCCCCCCCCccccccCCcceeEEEEEEEeeCCCCCC----eEEEecchhhhhcCHHHHHHHHHHc
Q 018339 202 PWIVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDS----CVVTRSNFKYLYWTLTQQLAHHTIN 277 (357)
Q Consensus 202 P~ivt~d~l~~~~~~~~~~~~~~~~~~~~~~~~~l~i~l~v~i~~~~~~NG----e~~q~~~t~~M~~~~~~lIa~~~S~ 277 (357)
|||+|..++.+ +.++.|+++| || +++|++++++|+|++++||+|+ |+
T Consensus 194 P~ivt~~~~~d--------------------~~~l~i~~~v--------NG~~~~e~~Q~~~t~~mi~~~~~lIa~l-S~ 244 (288)
T 4dbf_A 194 PWIETDINSID--------------------LDNLPIKARL--------THDGETQLKQDSNSNQMIMKMGEIIEFI-TA 244 (288)
T ss_dssp EEEECCGGGSC--------------------TTSCEEEEEE--------EETTEEEEEEEEEGGGBSSCHHHHHHHH-HT
T ss_pred CccccccccCC--------------------ccccEEEEEE--------cCCcceEEEEecCHHHhcCCHHHHHHHH-hC
Confidence 99998644322 3568888888 99 9999999999999999999998 89
Q ss_pred CcccCCCCEEEcCCCCCCccCCCCceEEEEecCccccccCCCCCcCCCCCCEEEEEEEEeCCCceeeeeeeeeeEeeC
Q 018339 278 GCNLRSGDLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPS 355 (357)
Q Consensus 278 ~~tL~pGDvI~TGTp~Gv~~~~~G~~~e~~i~g~~~l~~~~~~~~~L~~GD~V~~~~~~~~~~~~~~~G~~~~~v~~~ 355 (357)
++||+|||||+||||.|++ +|++||+|+++ |+ |+|+|+|+|+.+
T Consensus 245 ~~tL~pGDvI~TGTP~Gvg--------------------------~l~~GD~v~v~--ie------giG~L~n~v~~~ 288 (288)
T 4dbf_A 245 SMTLLPGDVIATGSPAGTE--------------------------AMVDGDYIEIE--IP------GIGKLGNPVVDA 288 (288)
T ss_dssp TSCBCTTCEEECCCCSCCC--------------------------BCCTTCEEEEE--ET------TTEEEEEEEEEC
T ss_pred CCCcCCCCEEEcCCCCCCe--------------------------ecCCCCEEEEE--EC------CcEEEEEEEEeC
Confidence 9999999999999999874 37999999999 66 999999999875
No 5
>3rr6_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.58A {Mycobacterium abscessus} PDB: 3qdf_A
Probab=100.00 E-value=4.3e-53 Score=401.61 Aligned_cols=214 Identities=29% Similarity=0.364 Sum_probs=188.2
Q ss_pred cCccccCCCceecCCeecccccc-ccccHHHHHHhccccCCCCCCCCCCCCCCceeeecCCcceecCCCeeecCCCCCCC
Q 018339 45 QKSLVPMGKVEMLLPMEIGDYTD-FFSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAP 123 (357)
Q Consensus 45 ~~~~~~~~~v~ll~P~~~~~~~~-~~~~~~H~~~~g~~~~~~~~~~~p~~~~~P~~f~k~~ssv~~~g~~I~~P~~~~~~ 123 (357)
++..+++++++|++|+.+....+ ..+|.+|++|++.. .| +.|++|+|+++|+++++++|.+|..
T Consensus 47 ~~~~~~~~~v~ll~P~~p~ki~cvG~NY~~h~~e~g~~--------~P---~~P~~F~K~~~s~~g~~~~I~~P~~---- 111 (265)
T 3rr6_A 47 TGRQWPLADVRLLAPILASKVVAMGKNYAAHAAEMGGD--------PP---ESPVIFIKPNTSIIGPGLPIQLPPS---- 111 (265)
T ss_dssp EEEEEEGGGSEECCSSCCSCEEEESCCBCSSGGGTTSS--------CC---CCCCEEEECGGGEECTTSCEECCTT----
T ss_pred CCcEeecccCeEcCCCCCceEEEEEcCHHHHHHHhCCC--------CC---CCCEEEEeCcceEeCCCCceECCCC----
Confidence 56678999999999998643211 23478899998753 22 5799999999999999999999976
Q ss_pred CCCCCCCCCCCCCceeceEEEEEEcCCCCCCCCCCHHHHhhceeEEEEeecCchhhhhhhhhcCCCCcccccCCCc--cC
Q 018339 124 SGNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYVPLGPFLGKSFGTT--LS 201 (357)
Q Consensus 124 ~~~~~~~~~~~~~ld~E~ELavVIgk~~~~g~~i~~e~A~~~I~Gy~l~nD~saRd~q~~~~~~l~~~~aK~fdt~--lG 201 (357)
+.++|||+|||+||||+ ++++++++|++||+||+++||+|+||+|.+.. +|.++|+||++ +|
T Consensus 112 ----------~~~~d~E~ELavVIGk~---~~~v~~~~A~~~V~Gyt~~nDvsaRd~q~~~~---~w~~aK~fd~~~plG 175 (265)
T 3rr6_A 112 ----------ATEVHHEGELAIVIGRP---CKDVPAARAAENILGYTIGNDVSARDHQRADG---QWTRAKGHDTFCPLG 175 (265)
T ss_dssp ----------CSCEEECEEEEEEECSC---BSSCCGGGTGGGEEEEEEEECCEEHHHHHHHS---SSHHHHHSTTCEEEE
T ss_pred ----------CCceeEEEEEEEEECCc---CCCCCHHHHHhheeEEEEEEEeEhHHhhhccC---CcceecccCCCcccC
Confidence 68999999999999999 99999999999999999999999999998653 79999999997 99
Q ss_pred CccccccccCCccCCCCCCCCCCCccccccCCcceeEEEEEEEeeCCCCCCeEEEecchhhhhcCHHHHHHHHHHcCccc
Q 018339 202 PWIVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTINGCNL 281 (357)
Q Consensus 202 P~ivt~d~l~~~~~~~~~~~~~~~~~~~~~~~~~l~i~l~v~i~~~~~~NGe~~q~~~t~~M~~~~~~lIa~~~S~~~tL 281 (357)
||++|. ++ +.++.|+++| ||+++|++++++|+|+++++|+|+ |+++||
T Consensus 176 P~ivt~--~d---------------------~~~l~i~~~v--------NGe~~q~g~t~~mi~~~~~lIa~l-S~~~tL 223 (265)
T 3rr6_A 176 PWIVTD--LD---------------------PADLEIRTEV--------NGQVRQRSRTSLLLHDVGAIVEWV-SAVMTL 223 (265)
T ss_dssp EEEESS--CC---------------------GGGCEEEEEE--------TTEEEEEEEGGGBSSCHHHHHHHH-HHHSCB
T ss_pred CcCcCC--CC---------------------cccCEEEEEE--------CCEEEEEECHHhhcCCHHHHHHHH-hcCCCc
Confidence 999973 43 2568888888 999999999999999999999998 899999
Q ss_pred CCCCEEEcCCCCCCccCCCCceEEEEecCccccccCCCCCcCCCCCCEEEEEEEEeCCCceeeeeeeeeeEeeC
Q 018339 282 RSGDLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPS 355 (357)
Q Consensus 282 ~pGDvI~TGTp~Gv~~~~~G~~~e~~i~g~~~l~~~~~~~~~L~~GD~V~~~~~~~~~~~~~~~G~~~~~v~~~ 355 (357)
+|||||+||||+|++ +|++||+|+++ |+ |+|+|+|+|+..
T Consensus 224 ~pGDvI~TGTp~Gvg--------------------------~l~~GD~v~v~--i~------giG~l~n~v~~~ 263 (265)
T 3rr6_A 224 LPGDVILTGTPEGVG--------------------------PIVDGDTVSVT--IE------GIGTLSNPVVRK 263 (265)
T ss_dssp CTTCEEECCCCSCCE--------------------------ECCTTCEEEEE--ET------TTEEEEEEEECC
T ss_pred CCCCEEEeCCCCCce--------------------------eCCCCCEEEEE--EC------CcEEEEEEEEeC
Confidence 999999999999874 37999999999 66 999999999865
No 6
>2dfu_A Probable 2-hydroxyhepta-2,4-diene-1,7-dioate ISOM; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase, structural GE NPPSFA; 2.20A {Thermus thermophilus}
Probab=100.00 E-value=8.6e-50 Score=379.18 Aligned_cols=218 Identities=22% Similarity=0.283 Sum_probs=179.7
Q ss_pred CccccCCCceecCCeeccccccc-cccHHHHHHhccccCCCCCCCCCCCCCCceeeecCCcceecCC---------Ceee
Q 018339 46 KSLVPMGKVEMLLPMEIGDYTDF-FSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISG---------TDIV 115 (357)
Q Consensus 46 ~~~~~~~~v~ll~P~~~~~~~~~-~~~~~H~~~~g~~~~~~~~~~~p~~~~~P~~f~k~~ssv~~~g---------~~I~ 115 (357)
+..+++++++|++|+.+..+.++ .+|.+|++|++..+. ++ .| +.|++|+|+++|++++| ++|.
T Consensus 31 ~~~~~~~~~~ll~P~~p~~i~~~g~Ny~~H~~e~~~~~~---~~-~p---~~P~~f~k~~~s~~~~~~~~rp~g~~~~i~ 103 (264)
T 2dfu_A 31 GRRYDLASVTLLPPATPTKIVCVGRNYREHIREMGHDFG---ED-LP---KEPGLFLKGPNALARPGNPRDPWGTAEPVP 103 (264)
T ss_dssp EEEEEGGGSCEECSCCCSCEEEECSCBC-----------------CC---SSCCEEEECGGGEECCCBTTBHHHHSCCEE
T ss_pred CCccccccCeEcCCccCCeEEEEeCcHHHHHHHhccccc---CC-CC---CCCEEEEeccceEEccCCcccccCCCccee
Confidence 45689999999999975543222 348999999986421 11 22 47999999999999999 8888
Q ss_pred cCCCCCCCCCCCCCCCCCCCCceeceEEEEEEcCCCCCCCCCCHHHHhhceeEEEEeecCchhhhhhhhhcCCCCccccc
Q 018339 116 RPRGQFAPSGNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYVPLGPFLGKS 195 (357)
Q Consensus 116 ~P~~~~~~~~~~~~~~~~~~~ld~E~ELavVIgk~~~~g~~i~~e~A~~~I~Gy~l~nD~saRd~q~~~~~~l~~~~aK~ 195 (357)
+|.. +.++|||+||||||||+ ++++++++|++||+||+++||+|+||+|.++ .+|.++|+
T Consensus 104 ~p~~--------------~~~~d~E~ELavvig~~---~~~v~~~~a~~~I~gy~~~nDvt~Rd~q~~~---~~~~~aK~ 163 (264)
T 2dfu_A 104 YPFF--------------TEELHYEGELAVVVGDR---MRHVPPEKALDHVLGYTVAVDITARDVQKKD---LQWVRAKS 163 (264)
T ss_dssp ECSS--------------CSCEECCEEEEEEECSC---BSSCCHHHHGGGEEEEEEEECCEEHHHHHHS---SSSHHHHC
T ss_pred cCCC--------------CCceeEEEEEEEEECCC---CCCCCHHHHHHHhhEeEEEEEeEhhhhhhcc---CCCceeec
Confidence 8865 67899999999999999 8999999999999999999999999999875 48999999
Q ss_pred CCCc--cCCccccccccCCccCCCCCCCCCCCccccccCCcceeEEEEEEEeeCCCCCCeEEEecchhhhhcCHHHHHHH
Q 018339 196 FGTT--LSPWIVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAH 273 (357)
Q Consensus 196 fdt~--lGP~ivt~d~l~~~~~~~~~~~~~~~~~~~~~~~~~l~i~l~v~i~~~~~~NGe~~q~~~t~~M~~~~~~lIa~ 273 (357)
||++ +|||+++ +++ +.++.|+++| ||+++|++++++|+|+++++|+|
T Consensus 164 ~d~~~plGp~i~~--~~d---------------------~~~l~i~~~v--------NGe~~q~g~t~~mi~~~~~lia~ 212 (264)
T 2dfu_A 164 ADKFLPLGPWLET--DLN---------------------PQDTWVRTYV--------NGTLRQEGHTSQMIFSVAEILSY 212 (264)
T ss_dssp STTCEEEEEEEES--SCC---------------------TTSCEEEEEE--------TTEEEEEEEGGGBSSCHHHHHHH
T ss_pred CCCCEEECCcCcc--ccC---------------------CCccEEEEEE--------CCEEEEEecHHHhhcCHHHHHHH
Confidence 9995 9999998 453 2568888888 99999999999999999999999
Q ss_pred HHHcCcccCCCCEEEcCCCCCCccCCCCceEEEEecCccccccCCCCCcCCCCCCEEEEEEEEeCCCceeeeeeeeeeEe
Q 018339 274 HTINGCNLRSGDLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIV 353 (357)
Q Consensus 274 ~~S~~~tL~pGDvI~TGTp~Gv~~~~~G~~~e~~i~g~~~l~~~~~~~~~L~~GD~V~~~~~~~~~~~~~~~G~~~~~v~ 353 (357)
+ |++++|+|||||+||||+|++ +|++||+|+++ |. |+|+|+|+|+
T Consensus 213 l-s~~~tL~pGDvI~TGTp~Gvg--------------------------~l~~GD~v~~~--i~------glG~l~~~v~ 257 (264)
T 2dfu_A 213 I-STFMTLEPLDVVLTGTPEGVG--------------------------ALRPGDRLEVA--VE------GVGTLFTLIG 257 (264)
T ss_dssp H-HTTSCBCTTCEEECCCCSCCC--------------------------BCCTTCEEEEE--ET------TTEEEEEEEE
T ss_pred H-hcCCCcCCCCEEEeCCCCCcc--------------------------ccCCCCEEEEE--Ee------CcEEEEEEEE
Confidence 8 899999999999999999873 37999999999 56 9999999998
Q ss_pred eCC
Q 018339 354 PST 356 (357)
Q Consensus 354 ~~~ 356 (357)
+..
T Consensus 258 ~~~ 260 (264)
T 2dfu_A 258 PKE 260 (264)
T ss_dssp EEC
T ss_pred ecC
Confidence 764
No 7
>3l53_A Putative fumarylacetoacetate isomerase/hydrolase; structural genomics, PSI-2, protein structure initiative; HET: TAR; 2.10A {Oleispira antarctica} PDB: 3v77_A*
Probab=100.00 E-value=1e-49 Score=370.32 Aligned_cols=199 Identities=22% Similarity=0.239 Sum_probs=170.4
Q ss_pred CCceecCCeecccccccc----ccHHHHHHhccccCCCCCCCCCCCCCCceeeecCCcceecCCCeeecCCCCCCCCCCC
Q 018339 52 GKVEMLLPMEIGDYTDFF----SSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPSGNS 127 (357)
Q Consensus 52 ~~v~ll~P~~~~~~~~~~----~~~~H~~~~g~~~~~~~~~~~p~~~~~P~~f~k~~ssv~~~g~~I~~P~~~~~~~~~~ 127 (357)
..|+|++|++.+- .+++ +|.+|++|+|.. .| +.|++|+|++++++++|++|.+|..
T Consensus 3 ~~~~~~~P~p~~~-~ki~cvG~Ny~~h~~e~g~~--------~p---~~P~~F~K~~~s~~~~g~~I~~P~~-------- 62 (224)
T 3l53_A 3 ELILNQRPYPRDL-GKIVCVGRNYAAHAKELNNP--------IP---SSPILFIKPASSAVPFGPVFSIPKD-------- 62 (224)
T ss_dssp CCEETTEECSSCC-CEEEEEECCSHHHHHHTTCC--------CC---SSCEEEEEEGGGEEESCSEECCCSS--------
T ss_pred ccceecCCCCCCC-CeEEEEccCHHHHHHHhCCC--------CC---CCCEEEecCCceEECCCCeEecCCC--------
Confidence 4688899987531 2333 389999999853 23 6899999999999999999999976
Q ss_pred CCCCCCCCCceeceEEEEEEcCCCCCCCCCCHHHHhhceeEEEEeecCchhhhhhhhhc-CCCCcccccCCCc--cCCcc
Q 018339 128 PPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYV-PLGPFLGKSFGTT--LSPWI 204 (357)
Q Consensus 128 ~~~~~~~~~ld~E~ELavVIgk~~~~g~~i~~e~A~~~I~Gy~l~nD~saRd~q~~~~~-~l~~~~aK~fdt~--lGP~i 204 (357)
+.++|||+||||||||+ |+++++++|++||+||+++||||+||+|.+++. .++|.++|+||++ +|||
T Consensus 63 ------~~~~d~E~ELavvIgk~---~~~i~~~~A~~~I~Gy~~~nDvs~Rd~q~~~~~~g~~w~~aK~fd~~~plGp~- 132 (224)
T 3l53_A 63 ------QGSVHHELEIAILIGKA---LSRASTEQVAESIAGIGLGLDLTLRDVQDQLKEKGHPWERAKSFDGACPLTEF- 132 (224)
T ss_dssp ------SSCEEECEEEEEEECSC---BSSCCHHHHHHHEEEEEEEECCEEHHHHHHHHHTTCCSHHHHSSTTSEEECCB-
T ss_pred ------CCCcceEEEEEEEECCC---CCCCCHHHHHhhccEEEEEEEeEhHHhhhhhhhcCCCcceeeccCCCcccCCc-
Confidence 67999999999999999 999999999999999999999999999998764 4679999999995 9997
Q ss_pred cccc--ccCCccCCCCCCCCCCCccccccCCcceeEEEEEEEeeCCCCCCeEEEecchhhhhcCHHHHHHHHHHcCcccC
Q 018339 205 VTLD--ALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTINGCNLR 282 (357)
Q Consensus 205 vt~d--~l~~~~~~~~~~~~~~~~~~~~~~~~~l~i~l~v~i~~~~~~NGe~~q~~~t~~M~~~~~~lIa~~~S~~~tL~ 282 (357)
++.+ ++.+ +.++.++++| ||+++|++++++|+|+++++|+|+ |++++|+
T Consensus 133 v~~~~~~~~d--------------------~~~l~i~l~v--------NGe~~q~g~t~~mi~~~~~lia~l-S~~~tL~ 183 (224)
T 3l53_A 133 VAVNLASEDE--------------------WQAIGLTLEK--------NGQFQQQGSSAEMLFPILPLIAHM-SEHFSLQ 183 (224)
T ss_dssp BCCCCSSGGG--------------------GGGEEEEEEE--------TTEEEEEEEGGGCSSCHHHHHHHH-HHHSCBC
T ss_pred EeCchhhcCC--------------------hhccEEEEEE--------CCEEEEEEcHHHhcCCHHHHHHHH-HCCCCcC
Confidence 5666 6643 3668888888 999999999999999999999998 8999999
Q ss_pred CCCEEEcCCCCCCccCCCCceEEEEec
Q 018339 283 SGDLLGTGTISGPEPESLGCLLELTWN 309 (357)
Q Consensus 283 pGDvI~TGTp~Gv~~~~~G~~~e~~i~ 309 (357)
|||||+||||+|++++++||.++++++
T Consensus 184 pGDvI~TGTp~Gvg~l~~GD~v~~~i~ 210 (224)
T 3l53_A 184 PGDVILTGTPAGVGPLEVGDSLSAKLS 210 (224)
T ss_dssp TTCEEECCCCSCCEECCTTCEEEEEEE
T ss_pred CCCEEEcCCCCCCEEcCCCCEEEEEEE
Confidence 999999999999876655555555555
No 8
>1wzo_A HPCE; structural genomics, riken structural genomics/proteom initiative, RSGI, NPPSFA, isomerase; 1.90A {Thermus thermophilus}
Probab=100.00 E-value=2.3e-49 Score=372.53 Aligned_cols=217 Identities=22% Similarity=0.320 Sum_probs=180.6
Q ss_pred cCccccCCCceecCCeeccccc-cccccHHHHHHhccccCCCCCCCCCCCCCCceeeecCCcceecCCCeeecCCCCCCC
Q 018339 45 QKSLVPMGKVEMLLPMEIGDYT-DFFSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAP 123 (357)
Q Consensus 45 ~~~~~~~~~v~ll~P~~~~~~~-~~~~~~~H~~~~g~~~~~~~~~~~p~~~~~P~~f~k~~ssv~~~g~~I~~P~~~~~~ 123 (357)
.+..+++++++|++|+.+.... ...+|.+|++|+|.. .| +.|++|+|++++++++|++|.+|..
T Consensus 26 ~~~~~~~~~~~~l~P~~p~~i~~vG~ny~~h~~e~g~~--------~P---~~P~~f~k~~~~~~~~g~~i~~p~~---- 90 (246)
T 1wzo_A 26 AGEAHRPEDVTWLLPFTPGKILGVALNYADHAEELGLS--------RP---EEPALFWKPNTSLLPHKGVVLYPKG---- 90 (246)
T ss_dssp TCCEECGGGSEECCSSCCCCEEEEESCBC------CCC--------CC---SSCEEEEECGGGEECTTCCEEECTT----
T ss_pred CCCccccccCEEcCCCCCCeEEEEEcChHHHHHHhCCC--------CC---CCCEEEEECcccEeCCCCeEECCCC----
Confidence 3456899999999999554321 223478899999753 23 5799999999999999999999975
Q ss_pred CCCCCCCCCCCCCceeceEEEEEEcCCCCCCCCCCHHHHhhceeEEEEeecCchhhhhhhhhcCCCCcccccCCCc--cC
Q 018339 124 SGNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYVPLGPFLGKSFGTT--LS 201 (357)
Q Consensus 124 ~~~~~~~~~~~~~ld~E~ELavVIgk~~~~g~~i~~e~A~~~I~Gy~l~nD~saRd~q~~~~~~l~~~~aK~fdt~--lG 201 (357)
+.++|||+||||||||+ ++++++++|++||+||+++||+|+||+|...+ .+|.++|+|+++ +|
T Consensus 91 ----------~~~~~~E~ELavvig~~---~~~v~~~~a~~~i~g~~~~nD~s~rd~q~~~~--~~~~~~K~~d~~~~lG 155 (246)
T 1wzo_A 91 ----------ARFVHYEVELAVVVGRP---MKRVRAKDALDYVLGYTIANDLVARDYVTNTF--RPPIRAKGRDTFLPLG 155 (246)
T ss_dssp ----------CSCEECCEEEEEEECSC---BSSCCHHHHGGGEEEEEEEECCEEGGGC------CCCHHHHCSTTCEEEE
T ss_pred ----------CCceeEEEEEEEEECCC---CCCCCHHHHHhheeEEEEEEECchHHhccccc--CCceeeccCCCCEEEC
Confidence 67899999999999999 89999999999999999999999999998764 479999999985 99
Q ss_pred CccccccccCCccCCCCCCCCCCCccccccCCcceeEEEEEEEeeCCCCCCeEEEecchhhhhcCHHHHHHHHHHcCccc
Q 018339 202 PWIVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTINGCNL 281 (357)
Q Consensus 202 P~ivt~d~l~~~~~~~~~~~~~~~~~~~~~~~~~l~i~l~v~i~~~~~~NGe~~q~~~t~~M~~~~~~lIa~~~S~~~tL 281 (357)
||++ .+++.+ +.+++|+++| ||+++|++++++|+|++.++|+|+ |++++|
T Consensus 156 p~i~-~~~i~d--------------------~~~l~i~~~v--------NGe~~q~g~t~~mi~~~~~lia~l-s~~~tL 205 (246)
T 1wzo_A 156 PFLV-VEEVED--------------------PQDLWLRAYV--------NGELRQEGHTSRMLYSVAELLEFI-SEFMTL 205 (246)
T ss_dssp EEEE-CSCCSC--------------------TTSCEEEEEE--------TTEEEEEEEGGGBSSCHHHHHHHH-HTTSCB
T ss_pred CcCc-HHHcCC--------------------CcccEEEEEE--------CCEEEEeeCHHHhCCCHHHHHHHH-hCCCCc
Confidence 9999 777743 2568888888 999999999999999999999998 899999
Q ss_pred CCCCEEEcCCCCCCccCCCCceEEEEecCccccccCCCCCcCCCCCCEEEEEEEEeCCCceeeeeeeeeeEeeC
Q 018339 282 RSGDLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPS 355 (357)
Q Consensus 282 ~pGDvI~TGTp~Gv~~~~~G~~~e~~i~g~~~l~~~~~~~~~L~~GD~V~~~~~~~~~~~~~~~G~~~~~v~~~ 355 (357)
+|||||+||||+|+++ |++||+|+++ |. |+|+|+|+|+..
T Consensus 206 ~pGDvI~TGTp~gvg~--------------------------l~~GD~v~~~--i~------glG~l~~~v~~~ 245 (246)
T 1wzo_A 206 EPYDVLLTGTPKGISQ--------------------------VRPGDVMRLE--IE------GLGALENPIEEE 245 (246)
T ss_dssp CTTCEEECCCCCCSCE--------------------------ECTTCEEEEE--ET------TSCEEEEEEEEC
T ss_pred CCCCEEEeCCCCCceE--------------------------CCCCCEEEEE--Ec------CcEEEEEEEEeC
Confidence 9999999999998743 7999999999 56 999999999864
No 9
>3s52_A Putative fumarylacetoacetate hydrolase family Pro; csgid, structural genomics, center for structural genomics O infectious diseases; 2.01A {Yersinia pestis} SCOP: d.177.1.1 PDB: 1nr9_A
Probab=100.00 E-value=1.9e-49 Score=367.81 Aligned_cols=212 Identities=18% Similarity=0.221 Sum_probs=179.1
Q ss_pred cccCCCceecCCeeccccccccccHHHHHHhccccCCCCCCCCCCCCCCceeeecCCcceecCCCeeecCCCCCCCCCCC
Q 018339 48 LVPMGKVEMLLPMEIGDYTDFFSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPSGNS 127 (357)
Q Consensus 48 ~~~~~~v~ll~P~~~~~~~~~~~~~~H~~~~g~~~~~~~~~~~p~~~~~P~~f~k~~ssv~~~g~~I~~P~~~~~~~~~~ 127 (357)
.+++.+-....|... -+....+|.+|++|+|.. .| +.|++|+|++++++++|++|.+|..
T Consensus 7 ~~~~~~~~~~~p~~k-i~~vG~Ny~~h~~e~g~~--------~p---~~P~~F~K~~~~~~~~g~~i~~p~~-------- 66 (221)
T 3s52_A 7 HRDWQGALLDFPVNK-VVCVGSNYAEHIKEMGST--------AS---VEPVLFIKPETALCDIRQPVSIPKD-------- 66 (221)
T ss_dssp CBBTTSCBCCSCCCE-EEEEESCBHHHHHHTTCC--------CC---SSCEEEEEEGGGEEETTSCBCCCSS--------
T ss_pred EEeeCCCcccCCCCc-EEEEeCCHHHHHHHhCCC--------CC---CceEEEEcCCceEeCCCCeEECCCC--------
Confidence 356666555555321 122234489999999853 23 6899999999999999999999976
Q ss_pred CCCCCCCCCceeceEEEEEEcCCCCCCCCCCHHHHhhceeEEEEeecCchhhhhhhhhc-CCCCcccccCCCc--cCCcc
Q 018339 128 PPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYV-PLGPFLGKSFGTT--LSPWI 204 (357)
Q Consensus 128 ~~~~~~~~~ld~E~ELavVIgk~~~~g~~i~~e~A~~~I~Gy~l~nD~saRd~q~~~~~-~l~~~~aK~fdt~--lGP~i 204 (357)
+.++|||+||||||||+ +++++++||++||+||+++||||+||+|.+.+. .++|.++|+||++ +|||+
T Consensus 67 ------~~~~d~E~ELavvig~~---~~~v~~~~A~~~I~Gy~~~nDvs~Rd~q~~~~~~~~~~~~aK~~d~~~plGp~i 137 (221)
T 3s52_A 67 ------FGSVHHEIELAVLIGTP---LKQASEDRVARAIAGYGVALDLTLRELQAGFKKAGQPWEKAKAFDGSCPISGFI 137 (221)
T ss_dssp ------SSCEEECEEEEEEECSC---BSSCCHHHHHHHEEEEEEEECCEEHHHHHHHHHHTCCSHHHHSSTTCEEECCBE
T ss_pred ------CCCccEEEEEEEEECCC---CCCCCHHHHHhhheEEEEEEEeEHHHHhhhhhccCCCcceeecCCCCccccCce
Confidence 67999999999999999 899999999999999999999999999987653 4789999999996 99998
Q ss_pred ccccccCCccCCCCCCCCCCCccccccCCcceeEEEEEEEeeCCCCCCeEEEecchhhhhcCHHHHHHHHHHcCcccCCC
Q 018339 205 VTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTINGCNLRSG 284 (357)
Q Consensus 205 vt~d~l~~~~~~~~~~~~~~~~~~~~~~~~~l~i~l~v~i~~~~~~NGe~~q~~~t~~M~~~~~~lIa~~~S~~~tL~pG 284 (357)
+.+++.+ +.+++++++| ||+++|++++++|+|+++++|+|+ |++++|+||
T Consensus 138 -~~~~~~d--------------------~~~l~i~l~v--------NGe~~q~g~t~~mi~~~~~lia~l-S~~~tL~pG 187 (221)
T 3s52_A 138 -PVAEFGD--------------------AQQADLSLTI--------NGEIRQQGNTRDMITPIIPLISYM-SRFFTLRAG 187 (221)
T ss_dssp -EHHHHCC--------------------GGGCEEEEEE--------TTEEEEEEEGGGBSSCHHHHHHHH-HHHSCBCTT
T ss_pred -ehhhcCC--------------------ccceEEEEEE--------CCEEEEEEcHHHccCCHHHHHHHH-hCCCCcCCC
Confidence 4676643 3568888888 999999999999999999999998 899999999
Q ss_pred CEEEcCCCCCCccCCCCceEEEEecCccccccCCCCCcCCCCCCEEEEEEEEeCCCceeeeeeeeeeEe
Q 018339 285 DLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIV 353 (357)
Q Consensus 285 DvI~TGTp~Gv~~~~~G~~~e~~i~g~~~l~~~~~~~~~L~~GD~V~~~~~~~~~~~~~~~G~~~~~v~ 353 (357)
|||+||||+|+++ |++||+|+++ |+ |+| ++|+|+
T Consensus 188 DvI~TGTp~Gvg~--------------------------l~~GD~v~~~--i~------glG-l~~~v~ 221 (221)
T 3s52_A 188 DIVLTGTPQGVGP--------------------------MQSGDMLKIM--LN------GKT-VNTRII 221 (221)
T ss_dssp CEEECCCCSCCEE--------------------------ECTTCEEEEE--ET------TEE-EEEEBC
T ss_pred CEEEeCCCCccee--------------------------cCCCCEEEEE--Ee------CeE-EEEEEC
Confidence 9999999998743 6889999888 56 899 999874
No 10
>1saw_A Hypothetical protein FLJ36880; structural genomics, fumarylacetoacetatehydrolase family, unknown function; 2.20A {Homo sapiens} SCOP: d.177.1.1
Probab=100.00 E-value=2.6e-46 Score=347.47 Aligned_cols=196 Identities=20% Similarity=0.283 Sum_probs=164.6
Q ss_pred cccHHHHHHhccccCCCCCCCCCCCCCCceeeecCCcceecCCCeeecCCCCCCCCCCCCCCCCCCCCceeceEEEEEEc
Q 018339 69 FSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPSGNSPPPFGPSQKLDFELEMAAVVG 148 (357)
Q Consensus 69 ~~~~~H~~~~g~~~~~~~~~~~p~~~~~P~~f~k~~ssv~~~g~~I~~P~~~~~~~~~~~~~~~~~~~ld~E~ELavVIg 148 (357)
.+|.+|++|+|.. .| +.|++|.|++++++++|++|.+|.. +.++|||+|||||||
T Consensus 26 ~ny~~h~~e~g~~--------~P---~~P~~f~k~~~~~~~~g~~i~~p~~--------------~~~~~~E~ELavvig 80 (225)
T 1saw_A 26 RNYADHVREMRSA--------VL---SEPVLFLKPSTAYAPEGSPILMPAY--------------TRNLHHELELGVVMG 80 (225)
T ss_dssp CCBC----------------------CCCCEEEEEGGGEEETTSCEECCTT--------------CSCEEECEEEEEEES
T ss_pred eCcHHHHHHhCCC--------CC---CCCEEEECCcceeeCCCCeEECCCC--------------CCCccEEEEEEEEEC
Confidence 3478999999753 23 4699999999999999999999975 678999999999999
Q ss_pred CCCCCCCCCCHHHHhhceeEEEEeecCchhhhhhhhhc-CCCCcccccCCCc--cCCccccccccCCccCCCCCCCCCCC
Q 018339 149 PGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYV-PLGPFLGKSFGTT--LSPWIVTLDALEPFACDSPKQDPQPL 225 (357)
Q Consensus 149 k~~~~g~~i~~e~A~~~I~Gy~l~nD~saRd~q~~~~~-~l~~~~aK~fdt~--lGP~ivt~d~l~~~~~~~~~~~~~~~ 225 (357)
|. |+++++++|++||+||+++||||+||+|.+.+. .++|.++|+|+++ +|||+ +.+++.+
T Consensus 81 ~~---~~~v~~~~a~~~i~g~~~~nDvt~r~~q~~~~~~~~~~~~aK~~d~~~plGp~v-~~~~~~d------------- 143 (225)
T 1saw_A 81 KR---CRAVPEAAAMDYVGGYALCLDMTARDVQDECKKKGLPWTLAKSFTASCPVSAFV-PKEKIPD------------- 143 (225)
T ss_dssp SC---BCSCCTTTGGGSEEEEEEEECCEEHHHHHHHHHHTCCSHHHHCSTTCEEECCCE-ETTSCSC-------------
T ss_pred CC---CCCCCHHHHHHhheEEEecccccHHHHhhhhhccCCCceEeecCCCCEecCCcc-cHHHcCC-------------
Confidence 98 999999999999999999999999999998643 3689999999996 99996 5666632
Q ss_pred ccccccCCcceeEEEEEEEeeCCCCCCeEEEecchhhhhcCHHHHHHHHHHcCcccCCCCEEEcCCCCCCccCCCCceEE
Q 018339 226 PYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTINGCNLRSGDLLGTGTISGPEPESLGCLLE 305 (357)
Q Consensus 226 ~~~~~~~~~~l~i~l~v~i~~~~~~NGe~~q~~~t~~M~~~~~~lIa~~~S~~~tL~pGDvI~TGTp~Gv~~~~~G~~~e 305 (357)
+.++.++++| ||+++|++++++|+|++.++|+|+ |++++|+|||||+||||+|+++
T Consensus 144 -------~~~l~l~l~v--------NGe~~q~g~~~~mi~~~~~lia~l-s~~~tL~~GDvI~TGTp~Gvg~-------- 199 (225)
T 1saw_A 144 -------PHKLKLWLKV--------NGELRQEGETSSMIFSIPYIISYV-SKIITLEEGDIILTGTPKGVGP-------- 199 (225)
T ss_dssp -------TTSCEEEEEE--------TTEEEEEEEGGGBSSCHHHHHHHH-HTTSCBCTTCEEECCCCSCCEE--------
T ss_pred -------CceeEEEEEE--------CCEEEEEEcHHHcCCCHHHHHHHH-hCCCCcCCCCEEEcCCCCCcee--------
Confidence 3568888888 999999999999999999999998 8999999999999999998743
Q ss_pred EEecCccccccCCCCCcCCCCCCEEEEEEEEeCCCceeeeeeeeeeEeeCC
Q 018339 306 LTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPST 356 (357)
Q Consensus 306 ~~i~g~~~l~~~~~~~~~L~~GD~V~~~~~~~~~~~~~~~G~~~~~v~~~~ 356 (357)
|++||+|+++ |. |+|+|+|+|+.+.
T Consensus 200 ------------------l~~Gd~v~~~--i~------glG~l~~~v~~~~ 224 (225)
T 1saw_A 200 ------------------VKENDEIEAG--IH------GLVSMTFKVEKPE 224 (225)
T ss_dssp ------------------ECTTCEEEEE--ET------TTEEEEEEEECCC
T ss_pred ------------------CCCCCEEEEE--EC------CcEEEEEEEEEee
Confidence 6899999999 56 9999999998653
No 11
>1gtt_A 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase; lyase, bifunctional enzyme, multifunctional enzyme decarboxylase; 1.7A {Escherichia coli} SCOP: d.177.1.1 d.177.1.1 PDB: 1i7o_A
Probab=100.00 E-value=1.8e-46 Score=378.32 Aligned_cols=215 Identities=20% Similarity=0.291 Sum_probs=182.6
Q ss_pred CccccCCCceecCCeeccc-cccccccHHHHHHhccccCCCCCCCCCCCCCCceeeecCCcceecCCCeeecCCCCCCCC
Q 018339 46 KSLVPMGKVEMLLPMEIGD-YTDFFSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPS 124 (357)
Q Consensus 46 ~~~~~~~~v~ll~P~~~~~-~~~~~~~~~H~~~~g~~~~~~~~~~~p~~~~~P~~f~k~~ssv~~~g~~I~~P~~~~~~~ 124 (357)
...+++++++|++|+. .. +....+|.+|++|+|.. .| +.|++|.|++++++++|++|.+|..
T Consensus 207 ~~~~~~~~~~~~~p~~-~~i~~vG~ny~~h~~e~g~~--------~p---~~P~~f~k~~~~~~~~g~~i~~p~~----- 269 (429)
T 1gtt_A 207 REVTTRKSFPTLPHPH-GTLFALGLNYADHASELEFK--------PP---EEPLVFLKAPNTLTGDNQTSVRPNN----- 269 (429)
T ss_dssp GGCCSCCCCCCCSSSC-SCEEEESSCBCCC----------------C---CSCCEEEECGGGEECTTEEEEECTT-----
T ss_pred ccccccccceecCCCC-CcEEEEEeCHHHHHHHhCCC--------CC---CCCEEEEcCcceEeCCCCeEEcCCC-----
Confidence 3567999999999998 32 22234488999999753 23 5799999999999999999999976
Q ss_pred CCCCCCCCCCCCceeceEEEEEEcCCCCCCCCCCHHHHhhceeEEEEeecCchhh-hhhhhhcCCCCcccccCCCc--cC
Q 018339 125 GNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARD-IQAWEYVPLGPFLGKSFGTT--LS 201 (357)
Q Consensus 125 ~~~~~~~~~~~~ld~E~ELavVIgk~~~~g~~i~~e~A~~~I~Gy~l~nD~saRd-~q~~~~~~l~~~~aK~fdt~--lG 201 (357)
+.++|||+|||+||||+ |+++++++|++||+||+++||+|+|| +|... .+|.++|+||++ +|
T Consensus 270 ---------~~~~~~E~Elavvig~~---~~~v~~~~a~~~i~g~~~~nD~t~Rd~lq~~~---~~w~~~K~~d~~~~lG 334 (429)
T 1gtt_A 270 ---------IEYMHYEAELVVVIGKQ---ARNVSEADAMDYVAGYTVCNDYAIRDYLENYY---RPNLRVKSRDGLTPML 334 (429)
T ss_dssp ---------CSCEECCEEEEEEECSC---BSSCCTTTGGGGEEEEEEEECCEEGGGCCSSS---SSCHHHHSCTTCEEBC
T ss_pred ---------CCCccEEEEEEEEECCC---CCCCCHHHHHhhheEEEEEEEcccchhhhhhc---CCccccccCCCCEEEC
Confidence 67899999999999999 99999999999999999999999999 58643 478999999996 99
Q ss_pred CccccccccCCccCCCCCCCCCCCccccccCCcceeEEEEEEEeeCCCCCCeEEEecchhhhhcCHHHHHHHHHHcCccc
Q 018339 202 PWIVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTINGCNL 281 (357)
Q Consensus 202 P~ivt~d~l~~~~~~~~~~~~~~~~~~~~~~~~~l~i~l~v~i~~~~~~NGe~~q~~~t~~M~~~~~~lIa~~~S~~~tL 281 (357)
||+++++++.+ +.++.|+++| ||+++|++++++|+|++.++|+|+ |++++|
T Consensus 335 p~iv~~~~~~d--------------------~~~l~i~l~v--------NGe~~q~g~~~~mi~~~~~lia~l-s~~~tL 385 (429)
T 1gtt_A 335 STIVPKEAIPD--------------------PHNLTLRTFV--------NGELRQQGTTADLIFSVPFLIAYL-SEFMTL 385 (429)
T ss_dssp SCCEEGGGCSC--------------------TTSCEEEEEE--------TTEEEEEEEGGGBSSCHHHHHHHH-HTTSCB
T ss_pred CcccCHHHcCC--------------------CccceEEEEE--------CCEEEEEeCHHHcCCCHHHHHHHH-hCCCCc
Confidence 99999998853 2568888888 999999999999999999999998 899999
Q ss_pred CCCCEEEcCCCCCCccCCCCceEEEEecCccccccCCCCCcCCCCCCEEEEEEEEeCCCceeeeeeeeeeEeeC
Q 018339 282 RSGDLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPS 355 (357)
Q Consensus 282 ~pGDvI~TGTp~Gv~~~~~G~~~e~~i~g~~~l~~~~~~~~~L~~GD~V~~~~~~~~~~~~~~~G~~~~~v~~~ 355 (357)
+|||||+||||+|++ +|++||+|+++ |. |||+|+|+|+..
T Consensus 386 ~~GDvI~TGTp~gvg--------------------------~l~~GD~v~~~--i~------glG~l~~~v~~~ 425 (429)
T 1gtt_A 386 NPGDMIATGTPKGLS--------------------------DVVPGDEVVVE--VE------GVGRLVNRIVSE 425 (429)
T ss_dssp CTTCEEECCCCSCCC--------------------------BCCTTCEEEEE--ET------TTEEEEEEEEEH
T ss_pred CCCCEEEcCCCCCCe--------------------------ECCCCCEEEEE--Ec------CcEEEEEEEEec
Confidence 999999999999863 58999999999 56 999999999863
No 12
>2q18_X 2-keto-3-deoxy-D-arabinonate dehydratase; FAH-family fold, lyase; 2.10A {Sulfolobus solfataricus} PDB: 2q19_X 2q1a_X 2q1c_X 2q1d_X 3bqb_A
Probab=100.00 E-value=1.6e-44 Score=347.63 Aligned_cols=221 Identities=23% Similarity=0.244 Sum_probs=171.9
Q ss_pred ccccCCCceecCCeecccccc-ccccHH----HHHHhccccCCCCCCCCCC--CCCCceeeecC-CcceecCCCeeecCC
Q 018339 47 SLVPMGKVEMLLPMEIGDYTD-FFSSMH----HAKNCGTIFRGPANAVPAN--WFHLPIAYHGR-ASSVVISGTDIVRPR 118 (357)
Q Consensus 47 ~~~~~~~v~ll~P~~~~~~~~-~~~~~~----H~~~~g~~~~~~~~~~~p~--~~~~P~~f~k~-~ssv~~~g~~I~~P~ 118 (357)
..+++++++|++|+.++...+ ..+|.+ |++|++..-.+ .+.++. .++.|++|+|+ +++++++|++|.+|.
T Consensus 58 ~~~~~~~v~ll~Pv~p~~i~~vG~NY~~~~~~h~~e~~~~~~~--~~~~~~~~~~~~P~~F~k~~~~~~~g~~~~i~~p~ 135 (293)
T 2q18_X 58 KSFQINDIRITKPIDPPEVWGSGISYEMARERYSEENVAKILG--KTIYEKVYDAVRPEIFFKATPNRCVGHGEAIAVRS 135 (293)
T ss_dssp HHSEETTEEECCSSCCSCEEEEESCBC---------CCCEETT--EEHHHHHHHSSSCEEEEEECGGGEECTTSCEEECT
T ss_pred CCCCcccceEeCCcCcceEEEEEechhhhhHHHHHHhcccccc--ccccccccCCCCCEEEECCCCCeEecCCCEEEcCC
Confidence 357899999999998653222 233665 78887621000 000000 13579999996 699999999999997
Q ss_pred CCCCCCCCCCCCCCCCCCceeceEEEEEEcCCCCCCCCCCHHHHhhceeEEEEeecCchhhhhhhhhcCCCCcccccCCC
Q 018339 119 GQFAPSGNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYVPLGPFLGKSFGT 198 (357)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~ld~E~ELavVIgk~~~~g~~i~~e~A~~~I~Gy~l~nD~saRd~q~~~~~~l~~~~aK~fdt 198 (357)
. +.++|||+||||||||+ + +|+||+++||+|+||+|... +.+|.++|+||+
T Consensus 136 ~--------------~~~~d~E~ELavvIg~~---~----------~i~Gyt~~nDvs~Rd~q~~~--~~~~~~aK~~d~ 186 (293)
T 2q18_X 136 D--------------SEWTLPEPELAVVLDSN---G----------KILGYTIMDDVSARDLEAEN--PLYLPQSKIYAG 186 (293)
T ss_dssp T--------------CSCEECCEEEEEEECTT---C----------CEEEEEEEEECEEHHHHHHC--GGGHHHHHCSTT
T ss_pred C--------------CCCcceEEEEEEEECCC---C----------cCceEEEEEEeEeehhhhhc--ccCccccccCCC
Confidence 6 67899999999999998 6 39999999999999999863 234679999999
Q ss_pred c--cCCccccccccCCccCCCCCCCCCCCccccccCCcceeEEEEEEEeeCCCCCCeEEEec--chhhhhcCHHHHHHHH
Q 018339 199 T--LSPWIVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRS--NFKYLYWTLTQQLAHH 274 (357)
Q Consensus 199 ~--lGP~ivt~d~l~~~~~~~~~~~~~~~~~~~~~~~~~l~i~l~v~i~~~~~~NGe~~q~~--~t~~M~~~~~~lIa~~ 274 (357)
+ +|||++|.|++.+ +.++.|+|+|++ ||+++|++ ++++|+|++++||+|+
T Consensus 187 ~~plGP~ivt~dei~d--------------------~~~l~i~l~v~~------NGe~~q~g~~~t~~mi~~~~~li~~l 240 (293)
T 2q18_X 187 CCAFGPVIVTSDEIKN--------------------PYSLDITLKIVR------EGRVFFEGSVNTNKMRRKIEEQIQYL 240 (293)
T ss_dssp CEEEEEEEECGGGCSC--------------------TTSCEEEEEEEE------TTEEEEEEEEEGGGBCSCHHHHHHHH
T ss_pred CEEECCcEeCHHHcCC--------------------cceeEEEEEEEE------CCEEEEECCCCHHHhccCHHHHHHHH
Confidence 6 9999999988753 356888888765 99999998 6999999999999998
Q ss_pred HHcCcccCCCCEEEcCCCCCCccCCCCceEEEEecCccccccCCCCCcCCCCCCEEEEEEEEeCCCceeeeeeeeeeEee
Q 018339 275 TINGCNLRSGDLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVP 354 (357)
Q Consensus 275 ~S~~~tL~pGDvI~TGTp~Gv~~~~~G~~~e~~i~g~~~l~~~~~~~~~L~~GD~V~~~~~~~~~~~~~~~G~~~~~v~~ 354 (357)
|++++|+|||||+||| |.++ ....||++||+|+++ |. |||+|+|+|+.
T Consensus 241 -s~~~tL~pGDvI~TGT--g~~p---------------------~~~~~l~~GD~v~~~--i~------glG~l~n~v~~ 288 (293)
T 2q18_X 241 -IRDNPIPDGTILTTGT--AIVP---------------------GRDKGLKDEDIVEIT--IS------NIGTLITPVKK 288 (293)
T ss_dssp -HTTCCCCTTEEEECCC--SCCC---------------------CTTCCCCTTCEEEEE--ET------TTEEEEEEEEE
T ss_pred -HcCCCCCCCCEEECCC--CCCC---------------------CCCcccCCCCEEEEE--Ec------CcEEEEEEEEe
Confidence 8999999999999999 2211 125799999999999 56 99999999997
Q ss_pred CC
Q 018339 355 ST 356 (357)
Q Consensus 355 ~~ 356 (357)
.+
T Consensus 289 ~~ 290 (293)
T 2q18_X 289 RR 290 (293)
T ss_dssp CC
T ss_pred ee
Confidence 64
No 13
>1nkq_A Hypothetical 28.8 kDa protein in PSD1-SKO1 intergenic region; dimer, PSI, protein structure initiative; 2.20A {Saccharomyces cerevisiae} SCOP: d.177.1.1
Probab=100.00 E-value=8.8e-44 Score=336.97 Aligned_cols=174 Identities=24% Similarity=0.294 Sum_probs=146.6
Q ss_pred ccHHHHHHhccccCCCCCCCCCCCCCCceeeecCCcceecC------------------------C-CeeecCCCCCCCC
Q 018339 70 SSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVIS------------------------G-TDIVRPRGQFAPS 124 (357)
Q Consensus 70 ~~~~H~~~~g~~~~~~~~~~~p~~~~~P~~f~k~~ssv~~~------------------------g-~~I~~P~~~~~~~ 124 (357)
+|.+|++|++.. .| +.|++|+|++++++++ + ++|.+|..
T Consensus 18 Ny~~H~~E~g~~--------~p---~~P~~F~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~p~~----- 81 (259)
T 1nkq_A 18 NYAAHIKELNNS--------TP---KQPFFFLKPTSSIVTPLSSSLVKTTRPANSTFNGLNEDGTNPGPIFIPRG----- 81 (259)
T ss_dssp CBCSSGGGGGC---------------CCCEEEECGGGEEBCTTCC------CCSCSCCCCCTTSCCBCCEEECTT-----
T ss_pred CHHHHHHHhCCC--------CC---CCCEEEeeChhhEecccccccccccccccccccccccccCCCCcEEcCCC-----
Confidence 378999999753 22 5799999999999998 4 88888864
Q ss_pred CCCCCCCCCCCCceeceEEEEEEcCCCCCCCCCCH---HHHhhceeEEEEeecCchhhhhhhhhc-CCCCcccccCCCc-
Q 018339 125 GNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDV---NEAADHIFGVMLMNDWSARDIQAWEYV-PLGPFLGKSFGTT- 199 (357)
Q Consensus 125 ~~~~~~~~~~~~ld~E~ELavVIgk~~~~g~~i~~---e~A~~~I~Gy~l~nD~saRd~q~~~~~-~l~~~~aK~fdt~- 199 (357)
+ ++|||+||||||||+ ++++++ ++|++||+||+++||||+||+|.+++. .++|.++|+||++
T Consensus 82 ---------~-~~d~E~ELavvIg~~---~~~v~~~t~~ea~~~I~g~~~~nDvt~Rd~q~~~~~~~~~~~~aK~~d~~~ 148 (259)
T 1nkq_A 82 ---------V-KVHHEIELALIVSKH---LSNVTKMKPEEVYDSISGVALALDLTARNVQDEAKKKGLPWTISKGFDTFM 148 (259)
T ss_dssp ---------C-CEEECEEEEEEECSC---BCSCCCCCGGGTGGGEEEEEEEECCEEHHHHHHHHHHTCCSHHHHHSTTCE
T ss_pred ---------C-cccEEEEEEEEECCC---CCCCCcCCHHHHHhhhhEEEEEEeeeHHHhhhhhhhcCCCcceeeccCcCC
Confidence 4 699999999999999 888887 999999999999999999999986543 5789999999995
Q ss_pred -cCCccccccccCCccCCCCCCCCCCCccccccCC-cceeEEEEEEEeeCCCCCCeEEEecchhhhhcCHHHHHHHHHHc
Q 018339 200 -LSPWIVTLDALEPFACDSPKQDPQPLPYLAEKIS-KNYDISLEVQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTIN 277 (357)
Q Consensus 200 -lGP~ivt~d~l~~~~~~~~~~~~~~~~~~~~~~~-~~l~i~l~v~i~~~~~~NGe~~q~~~t~~M~~~~~~lIa~~~S~ 277 (357)
+|||+ +.+++.+.+. +. .++.|+++| ||+++|++++++|+|++.+||+|+ |+
T Consensus 149 p~Gp~V-~~~~~~d~~~----------------dl~~~l~l~l~v--------NGe~~q~g~t~~m~~~~~~Lia~l-S~ 202 (259)
T 1nkq_A 149 PISAIV-SREKFSSYKS----------------NLQDIFRVKCSV--------NGQLRQDGGTNLMLHPLHKILQHI-ST 202 (259)
T ss_dssp EBCCCE-EGGGGGGGTT----------------CCTTTEEEEEEE--------TTEEEEEEEGGGBSSCHHHHHHHH-HT
T ss_pred CcceEE-ECccccCccc----------------ccccceEEEEEE--------CCEEEEEEcHHHcCCCHHHHHHHH-hC
Confidence 99997 4566643211 12 457888888 999999999999999999999998 89
Q ss_pred CcccCCCCEEEcCCCCCCccC
Q 018339 278 GCNLRSGDLLGTGTISGPEPE 298 (357)
Q Consensus 278 ~~tL~pGDvI~TGTp~Gv~~~ 298 (357)
+++|+|||||+||||+|++++
T Consensus 203 ~~tL~pGDvI~TGTp~Gvg~l 223 (259)
T 1nkq_A 203 MISLEPGDIILTGTPAGVGEL 223 (259)
T ss_dssp TSCBCTTCEEECCCCSCCEEE
T ss_pred CCCcCCCCEEEeCCCCCcEec
Confidence 999999999999999987543
No 14
>1gtt_A 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase; lyase, bifunctional enzyme, multifunctional enzyme decarboxylase; 1.7A {Escherichia coli} SCOP: d.177.1.1 d.177.1.1 PDB: 1i7o_A
Probab=100.00 E-value=9.1e-43 Score=351.26 Aligned_cols=189 Identities=19% Similarity=0.145 Sum_probs=158.7
Q ss_pred cccHHHHHHhccccCCCCCCCCCCCCCCceeeecCCcceecCCCeeecCCCCCCCCCCCCCCCCCCCCceeceEEEEEEc
Q 018339 69 FSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPSGNSPPPFGPSQKLDFELEMAAVVG 148 (357)
Q Consensus 69 ~~~~~H~~~~g~~~~~~~~~~~p~~~~~P~~f~k~~ssv~~~g~~I~~P~~~~~~~~~~~~~~~~~~~ld~E~ELavVIg 148 (357)
.+|.+|++|++..+..+. ....++.|++|+|++++++++|++|.+|.. ++ +|||+|||+|||
T Consensus 10 ~Ny~~H~~e~~~~~~~~~---~~~~p~~P~~f~k~~~~~~~~g~~i~~p~~--------------~~-~~~E~Elavvig 71 (429)
T 1gtt_A 10 LNHRSQLDAWQEAFQQSP---YKAPPKTAVWFIKPRNTVIGCGEPIPFPQG--------------EK-VLSGATVALIVG 71 (429)
T ss_dssp SCBHHHHHHHTTGGGSTT---TCSCCSSCEEEEECGGGEECTTCCEEECTT--------------CC-EECCEEEEEEEC
T ss_pred chHHHHHHHhhccccccc---cCCCCCCCEEEEcCcceEEcCCCeeecCCC--------------CC-ccEEEEEEEEEC
Confidence 348999999986432111 111247899999999999999999999975 56 999999999999
Q ss_pred CCCCCCCCCCHHHHhhceeEEEEeecCchhhhhhhhhcCCCCcccccCCCc--cCCccccccccCCccCCCCCCCCCCCc
Q 018339 149 PGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYVPLGPFLGKSFGTT--LSPWIVTLDALEPFACDSPKQDPQPLP 226 (357)
Q Consensus 149 k~~~~g~~i~~e~A~~~I~Gy~l~nD~saRd~q~~~~~~l~~~~aK~fdt~--lGP~ivt~d~l~~~~~~~~~~~~~~~~ 226 (357)
|+ |+++++++|++||+||+++||+|+||+|.. .+|.++|+||++ +||| +++.+
T Consensus 72 ~~---~~~v~~~~a~~~i~gy~~~nD~s~Rd~~~~----~~~~~aK~fd~~~~lGp~----~~~~d-------------- 126 (429)
T 1gtt_A 72 KT---ATKVREEDAAEYIAGYALANDVSLPEESFY----RPAIKAKCRDGFCPIGET----VALSN-------------- 126 (429)
T ss_dssp SC---BSSCCGGGGGGGEEEEEEEECCBSCCCCSS----SCCHHHHCSTTCEEBCCC----BCCSC--------------
T ss_pred CC---CCCCCHHHHHhHhhEEEEEEEeeehhhhcc----CCccccCCCCCCEEECCh----hhcCC--------------
Confidence 99 999999999999999999999999997643 378999999996 9999 44532
Q ss_pred cccccCCcceeEEEEEEEeeCCCCCCeEEEecchhhhhcCHHHHHHHHHHcCcccCCCCEEEcCCCCCCccCCCCceEEE
Q 018339 227 YLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTINGCNLRSGDLLGTGTISGPEPESLGCLLEL 306 (357)
Q Consensus 227 ~~~~~~~~~l~i~l~v~i~~~~~~NGe~~q~~~t~~M~~~~~~lIa~~~S~~~tL~pGDvI~TGTp~Gv~~~~~G~~~e~ 306 (357)
+.++.|+++| ||+++|++++++|+|+++++|+|+ |++++|+|||||+||||+|++++++||.+++
T Consensus 127 ------~~~l~i~~~v--------NGe~~q~g~t~~mi~~~~~li~~l-s~~~tL~~GDvI~TGTp~g~~~l~~GD~v~~ 191 (429)
T 1gtt_A 127 ------VDNLTIYTEI--------NGRPADHWNTADLQRNAAQLLSAL-SEFATLNPGDAILLGTPQARVEIQPGDRVRV 191 (429)
T ss_dssp ------CTTCEEEEEE--------TTEEEEEEEGGGBSSCHHHHHHHH-HTTSCBCTTCEEECCCCSCCCEECTTCEEEE
T ss_pred ------ccccEEEEEE--------CCEEEEeCCHHHhcCCHHHHHHHH-hcCCCcCCCCEEEEeccCcceecCCCCEEEE
Confidence 3568888888 999999999999999999999998 8999999999999999999876666666666
Q ss_pred EecCccccc
Q 018339 307 TWNGQKPLS 315 (357)
Q Consensus 307 ~i~g~~~l~ 315 (357)
+++|++.++
T Consensus 192 ~i~glG~l~ 200 (429)
T 1gtt_A 192 LAEGFPPLE 200 (429)
T ss_dssp EETTSCCEE
T ss_pred EECCcceeE
Confidence 666665544
No 15
>2eb4_A 2-OXO-HEPT-3-ENE-1,7-dioate hydratase; lyase; 1.60A {Escherichia coli} PDB: 2eb5_A 2eb6_A
Probab=100.00 E-value=1.5e-37 Score=295.28 Aligned_cols=191 Identities=14% Similarity=0.070 Sum_probs=154.4
Q ss_pred cccHHHHHHhccccCCCCCCCCCCCCCCceeeecCCcceecCCCeeecCCCCCCCCCCCCCCCCCCCCceeceEEEEEEc
Q 018339 69 FSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPSGNSPPPFGPSQKLDFELEMAAVVG 148 (357)
Q Consensus 69 ~~~~~H~~~~g~~~~~~~~~~~p~~~~~P~~f~k~~ssv~~~g~~I~~P~~~~~~~~~~~~~~~~~~~ld~E~ELavVIg 148 (357)
.+|..|.+++|.. .|.++.+++++++++|++|.+|.. .++|||+|||||||
T Consensus 64 l~~~~~~~~~g~~--------------~P~~~~l~~~~~~~~g~~i~~p~~---------------~~~~~E~ELa~vig 114 (267)
T 2eb4_A 64 LTSKAMQASSQIS--------------EPDYGALLDDMFFHDGSDIPTDRF---------------IVPRIEVELAFVLA 114 (267)
T ss_dssp CHHHHHCSSCCCC--------------SCEEEEEEGGGEECTTEEECGGGC---------------SSCEEEEEEEEEES
T ss_pred cCCHHHHHHhCCC--------------CCcEEEEechheecCCCeecCCcc---------------CcccEeeEEEEEEC
Confidence 3467777776642 355556667899999999988763 36899999999999
Q ss_pred CCCCCCCCCCHHHHhhceeEEEEeecCchhhhhhhhhc-----CCCCccccc-CCCc--cCCccccccccCCccCCCCCC
Q 018339 149 PGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYV-----PLGPFLGKS-FGTT--LSPWIVTLDALEPFACDSPKQ 220 (357)
Q Consensus 149 k~~~~g~~i~~e~A~~~I~Gy~l~nD~saRd~q~~~~~-----~l~~~~aK~-fdt~--lGP~ivt~d~l~~~~~~~~~~ 220 (357)
|+++ |+++++++|++||+||+++||++.|+++.|... ...|..+|+ ++++ +|||++++++++
T Consensus 115 ~~l~-~~~vt~~~a~~~v~g~~~~~ei~d~r~~~~~~~~~~~~~~~~~~Ad~~~~~~~~lGp~~v~~~~~d--------- 184 (267)
T 2eb4_A 115 KPLR-GPNCTLFDVYNATDYVIPALELIDARCHNIDPETQRPRKVFDTISDNAANAGVILGGRPIKPDELD--------- 184 (267)
T ss_dssp SCBC-CSSCCHHHHHHHEEEEEEEEEEECCSBCCC------CCHHHHHHHTGGGEEEEEECSCCBCTTSSC---------
T ss_pred CCCC-CCCCCHHHHHHhhceEEEEEEeecccccccccccccccCccceeecccccccEEECCCcCCcccCC---------
Confidence 9976 789999999999999999999998888776541 123456664 4444 999999988763
Q ss_pred CCCCCccccccCCcceeEEEEEEEeeCCCCCCeEEEecchhhhhcCHHHHHHHHHHcC-----cccCCCCEEEcCCCCCC
Q 018339 221 DPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTING-----CNLRSGDLLGTGTISGP 295 (357)
Q Consensus 221 ~~~~~~~~~~~~~~~l~i~l~v~i~~~~~~NGe~~q~~~t~~M~~~~~~lIa~~~S~~-----~tL~pGDvI~TGTp~Gv 295 (357)
+.++.++|++ ||+++|+|++++|+|++.++|+|+ |+. ++|+|||||+||||.|+
T Consensus 185 ------------~~~l~~~l~v--------NGe~~q~g~t~~ml~~p~~~i~~l-s~~l~~~g~tL~~GDvI~TGT~~g~ 243 (267)
T 2eb4_A 185 ------------LRWISALMYR--------NGVIEETGVAAGVLNHPANGVAWL-ANKLAPYDVQLEAGQIILGGSFTRP 243 (267)
T ss_dssp ------------GGGCEEEEEE--------TTEEEEEEEGGGTTTSTTHHHHHH-HHHHGGGTCCBCTTCEEECCCSSCC
T ss_pred ------------hhhCeEEEEE--------CCEEEEEecHHhcccCHHHHHHHH-HHHHHHcCCCCCCCCEEECCCCCCC
Confidence 2568899998 999999999999999999999998 554 59999999999999864
Q ss_pred ccCCCCceEEEEecCccccccCCCCCcCCCCCCEEEEEEEEeCCCceeeeeeeeeeEe
Q 018339 296 EPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIV 353 (357)
Q Consensus 296 ~~~~~G~~~e~~i~g~~~l~~~~~~~~~L~~GD~V~~~~~~~~~~~~~~~G~~~~~v~ 353 (357)
.+|++||+|+++ |+ |+|+++++++
T Consensus 244 --------------------------~~l~~GD~v~~~--i~------glG~l~~~~~ 267 (267)
T 2eb4_A 244 --------------------------VPARKGDTFHVD--YG------NMGSISCRFV 267 (267)
T ss_dssp --------------------------EECCTTCEEEEE--CG------GGCEEEEEEC
T ss_pred --------------------------EECCCCCEEEEE--Ec------CCCeEEEEEC
Confidence 567889999888 66 8999988873
No 16
>2wqt_A 2-keto-4-pentenoate hydratase; lyase, dodecahedral form, aromatic hydrocarbons catabolism; 2.80A {Escherichia coli} PDB: 1sv6_A
Probab=100.00 E-value=5.4e-36 Score=285.08 Aligned_cols=193 Identities=13% Similarity=0.086 Sum_probs=158.6
Q ss_pred cccccccHHHHHHhccccCCCCCCCCCCCCCCceeeecCCcceecCCCeeecCCCCCCCCCCCCCCCCCCCCceeceEEE
Q 018339 65 YTDFFSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPSGNSPPPFGPSQKLDFELEMA 144 (357)
Q Consensus 65 ~~~~~~~~~H~~~~g~~~~~~~~~~~p~~~~~P~~f~k~~ssv~~~g~~I~~P~~~~~~~~~~~~~~~~~~~ld~E~ELa 144 (357)
|....+|..|++++|.. .| ..|.+|.| +++++|++|.+|.. .++|||+|||
T Consensus 60 ~KiGln~~~h~~e~g~~--------~P---~~~~lf~~---~~~~~g~~i~~p~~---------------~~~~~E~ELa 110 (270)
T 2wqt_A 60 RKVGLTHPKVQQQLGVD--------QP---DFGTLFAD---MCYGDNEIIPFSRV---------------LQPRIEAEIA 110 (270)
T ss_dssp EEEECCSHHHHHTTTCS--------SC---EEEEEEGG---GEEETTEEECGGGS---------------SSCEEEEEEE
T ss_pred eEecCCCHHHHHHhCCC--------CC---CEEEEech---heeCCCCeeecCcc---------------CccceeeEEE
Confidence 33455689999999853 23 46888876 78999999988863 4799999999
Q ss_pred EEEcCCCCCCCCCCHHHHhh---ceeEEEEeecCchhhhhhhhhcCCCCcccccCCC---ccCCccccccccCCccCCCC
Q 018339 145 AVVGPGNELGKPIDVNEAAD---HIFGVMLMNDWSARDIQAWEYVPLGPFLGKSFGT---TLSPWIVTLDALEPFACDSP 218 (357)
Q Consensus 145 vVIgk~~~~g~~i~~e~A~~---~I~Gy~l~nD~saRd~q~~~~~~l~~~~aK~fdt---~lGP~ivt~d~l~~~~~~~~ 218 (357)
|||||+++ |++++++||++ ||++|+..||++.|+||... ....+||+.+ .+|||++++++++
T Consensus 111 ~vig~~~~-g~~vt~~~a~~ai~~v~~~~ei~D~~~~~~~~k~----~d~~aDn~s~~~~~lGp~~v~~~~~d------- 178 (270)
T 2wqt_A 111 LVLNRDLP-ATDITFDELYNAIEWVLPALEVVGSRIRDWSIQF----VDTVADNASCGVYVIGGPAQRPAGLD------- 178 (270)
T ss_dssp EEESSCBC-CTTCCHHHHHTTEEEEEEEEEEECCSBGGGCCCH----HHHHHTGGGCCEEEECBCCBCSTTCC-------
T ss_pred EEECCCCC-CCCCCHHHHHHhhCeEEEEEEEEcCcccccCCCh----hcEEccCccCCCEeECcCcCCcccCC-------
Confidence 99999976 78999999998 78899999999999987321 1234555544 4999999988773
Q ss_pred CCCCCCCccccccCCcceeEEEEEEEeeCCCCCCeEEEecchhhhhcCHHHHHHHHHHc-----CcccCCCCEEEcCCCC
Q 018339 219 KQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTIN-----GCNLRSGDLLGTGTIS 293 (357)
Q Consensus 219 ~~~~~~~~~~~~~~~~~l~i~l~v~i~~~~~~NGe~~q~~~t~~M~~~~~~lIa~~~S~-----~~tL~pGDvI~TGTp~ 293 (357)
+.++.++|++ ||+++|+|++++|+|++.++|+|+ |+ +++|+|||||+||||.
T Consensus 179 --------------~~~l~i~l~v--------NGe~~q~g~~~~ml~~p~~~v~~l-s~~l~~~g~tL~~GdvI~TGT~~ 235 (270)
T 2wqt_A 179 --------------LKNCAMKMTR--------NNEEVSSGRGSECLGHPLNAAVWL-ARKMASLGEPLRTGDIILTGALG 235 (270)
T ss_dssp --------------CSSCEEEEEE--------TTEEEEEEEGGGTTTSHHHHHHHH-HHHHHHTTCCBCTTCEEEEEESS
T ss_pred --------------hhhCeEEEEE--------CCEEEEEEchhhccCCHHHHHHHH-HHHHHhcCCCcCCCCEEEcCCCC
Confidence 2568888988 999999999999999999999998 55 7999999999999997
Q ss_pred CCccCCCCceEEEEecCccccccCCCCCcCCCCCCEEEEEEEEeCCCceeeeeeeeeeEeeC
Q 018339 294 GPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPS 355 (357)
Q Consensus 294 Gv~~~~~G~~~e~~i~g~~~l~~~~~~~~~L~~GD~V~~~~~~~~~~~~~~~G~~~~~v~~~ 355 (357)
|+ .+|++||+|+++ |+ |+|+++|+|+..
T Consensus 236 g~--------------------------~~l~~GD~v~~~--i~------glG~l~~~v~~~ 263 (270)
T 2wqt_A 236 PM--------------------------VAVNAGDRFEAH--IE------GIGSVAATFSSA 263 (270)
T ss_dssp CC--------------------------EECCTTCEEEEE--ET------TTEEEEEEECC-
T ss_pred CC--------------------------eeCCCCCEEEEE--Ec------CCceEEEEEEeC
Confidence 64 568999999888 56 899999998754
No 17
>1tyg_B YJBS; alpha beta barrel, protein-protein complex, THis, BIOS protein; 3.15A {Bacillus subtilis} SCOP: d.15.3.2
Probab=43.53 E-value=30 Score=26.62 Aligned_cols=14 Identities=21% Similarity=0.119 Sum_probs=11.3
Q ss_pred CcCCCCCCEEEEEE
Q 018339 321 RKFLEDGDEVTFTG 334 (357)
Q Consensus 321 ~~~L~~GD~V~~~~ 334 (357)
...|++||+|++--
T Consensus 69 ~~~L~dGD~Vei~~ 82 (87)
T 1tyg_B 69 EVELCDRDVIEIVH 82 (87)
T ss_dssp TSBCCSSSEEEEEE
T ss_pred CcCCCCCCEEEEEc
Confidence 35699999998763
No 18
>2cu3_A Unknown function protein; thermus thermophilus HB8, structural genomics, riken structu genomics/proteomics initiative, RSGI, NPPSFA; 1.70A {Thermus thermophilus} SCOP: d.15.3.2 PDB: 2htm_E
Probab=40.59 E-value=57 Score=22.91 Aligned_cols=54 Identities=17% Similarity=0.049 Sum_probs=30.8
Q ss_pred CCeEEEecchhhhhcCHHHHHHHHHHcCcccCCCCEEEcCCCCCCccCCCCceEEEEecCccccccCCCCCcCCCCCCEE
Q 018339 251 DSCVVTRSNFKYLYWTLTQQLAHHTINGCNLRSGDLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEV 330 (357)
Q Consensus 251 NGe~~q~~~t~~M~~~~~~lIa~~~S~~~tL~pGDvI~TGTp~Gv~~~~~G~~~e~~i~g~~~l~~~~~~~~~L~~GD~V 330 (357)
||+.++- . . -++.++++++ . +. + ..+-+.++|.- +.........|++||+|
T Consensus 5 Ng~~~~~-~--~--~tv~~ll~~l-~----~~---------~---------~~v~vavN~~~-v~~~~~~~~~L~dgD~v 55 (64)
T 2cu3_A 5 NGEPRPL-E--G--KTLKEVLEEM-G----VE---------L---------KGVAVLLNEEA-FLGLEVPDRPLRDGDVV 55 (64)
T ss_dssp TTEEECC-T--T--CCHHHHHHHH-T----BC---------G---------GGEEEEETTEE-EEGGGCCCCCCCTTCEE
T ss_pred CCEEEEc-C--C--CcHHHHHHHc-C----CC---------C---------CcEEEEECCEE-CCccccCCcCCCCCCEE
Confidence 9988864 2 1 3788999886 2 11 1 12234444421 11112234679999999
Q ss_pred EEE
Q 018339 331 TFT 333 (357)
Q Consensus 331 ~~~ 333 (357)
++-
T Consensus 56 ~i~ 58 (64)
T 2cu3_A 56 EVV 58 (64)
T ss_dssp EEE
T ss_pred EEE
Confidence 876
No 19
>3l53_A Putative fumarylacetoacetate isomerase/hydrolase; structural genomics, PSI-2, protein structure initiative; HET: TAR; 2.10A {Oleispira antarctica} PDB: 3v77_A*
Probab=35.37 E-value=22 Score=31.96 Aligned_cols=13 Identities=31% Similarity=0.207 Sum_probs=11.2
Q ss_pred cCCCCCCEEEEEE
Q 018339 322 KFLEDGDEVTFTG 334 (357)
Q Consensus 322 ~~L~~GD~V~~~~ 334 (357)
..|++||+|++++
T Consensus 197 g~l~~GD~v~~~i 209 (224)
T 3l53_A 197 GPLEVGDSLSAKL 209 (224)
T ss_dssp EECCTTCEEEEEE
T ss_pred EEcCCCCEEEEEE
Confidence 4699999999994
No 20
>2k52_A Uncharacterized protein MJ1198; metal-binding, zinc, zinc-finger, structural genomics, PSI-2, protein structure initiative; NMR {Methanocaldococcus jannaschii}
Probab=34.93 E-value=47 Score=24.38 Aligned_cols=53 Identities=19% Similarity=0.281 Sum_probs=31.8
Q ss_pred cccCCCCEEEcCCCCCCccCCCCceEEEE--ecCcccccc-CCCCCcCCCCCCEEEEEE
Q 018339 279 CNLRSGDLLGTGTISGPEPESLGCLLELT--WNGQKPLSL-DGFTRKFLEDGDEVTFTG 334 (357)
Q Consensus 279 ~tL~pGDvI~TGTp~Gv~~~~~G~~~e~~--i~g~~~l~~-~~~~~~~L~~GD~V~~~~ 334 (357)
|.++.||+ ..|+..++.+ -|..+++. ++|+-.++- .......++.||.|++.+
T Consensus 1 m~~~~G~i-v~G~V~~v~~--~G~fV~l~~~~~Gllh~sel~~~~~~~~~~Gd~V~v~V 56 (80)
T 2k52_A 1 MDVEPGKF-YKGVVTRIEK--YGAFINLNEQVRGLLRPRDMISLRLENLNVGDEIIVQA 56 (80)
T ss_dssp CCCCTTCE-EEEEEEEEET--TEEEEEEETTEEEEECGGGCSSCCGGGCCTTCEEEEEE
T ss_pred CCCCCCCE-EEEEEEEEeC--CEEEEEECCCCEEEEEHHHCCcccceeeCCCCEEEEEE
Confidence 45788888 6788877654 46666553 333322221 111113699999999985
No 21
>2k9x_A Tburm1, uncharacterized protein; unknown function; NMR {Trypanosoma brucei}
Probab=32.78 E-value=27 Score=28.03 Aligned_cols=62 Identities=24% Similarity=0.157 Sum_probs=34.5
Q ss_pred cCHHHHHHHHHHcCcccCCCCEEEcCCCCCCccCCCCceEEEEecCccccccCCCCCcCCCCCCEEEEE
Q 018339 265 WTLTQQLAHHTINGCNLRSGDLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFT 333 (357)
Q Consensus 265 ~~~~~lIa~~~S~~~tL~pGDvI~TGTp~Gv~~~~~G~~~e~~i~g~~~l~~~~~~~~~L~~GD~V~~~ 333 (357)
+++.++|+|+.+++..+ ..+++..+-+ ..+++| +-+-++|.. .+.-+.-..-|++||+|.+-
T Consensus 35 ~TV~dLl~~L~~~~~~~-r~~lf~~~g~---~~lrpg--IlVLVNg~d-~e~l~gldt~L~dgD~V~fi 96 (110)
T 2k9x_A 35 TNLNGLVQLLKTNYVKE-RPDLLVDQTG---QTLRPG--ILVLVNSCD-AEVVGGMDYVLNDGDTVEFI 96 (110)
T ss_dssp CCHHHHHHHHTTTTCCS-CHHHHBCSSS---SSBCTT--EEEEESSSB-HHHHTSSCCCCCSSCEEEEE
T ss_pred ccHHHHHHHHHHHcccc-chhhEecCCC---cccCCC--eEEEECCee-eeccCCcccCCCCcCEEEEe
Confidence 68999999995544455 3344432211 124556 445566532 11112223559999998775
Done!