Your job contains 1 sequence.
>018341
MSEGAMAVVKPEMKSYIWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYAISLP
QRVNPAIFGLVLDYCRFHQVPGRSNKERKMFDEKFIRMDTKKLCELTSAADSLQLKPLVD
LTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLNNVTDDPRIRLLNRLYARKRKEL
KEREKLKNVEVEEEHVDERSVDDLLSFINGGNGDSKGIKTNKNKKKNRRRKDQLKDSSTN
NLNGNHKEFNSLHSAFHNGGLNDIAVSTPHKTSKLQCSTAVTCSPKMEFDDGEIDDDLDP
AMKEELDREVEDFARRLNSDWPQRMQEILSLGQDRRLVQVSMNGNCSSRRCTSLDSR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 018341
(357 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:505006407 - symbol:SK21 "AT3G61415" species:37... 1032 3.2e-104 1
TAIR|locus:2050709 - symbol:SK20 "AT2G45950" species:3702... 979 1.3e-98 1
DICTYBASE|DDB_G0269230 - symbol:fpaA "ubiquitin ligase su... 213 2.0e-17 1
DICTYBASE|DDB_G0273615 - symbol:fpaB-2 "ubiquitin ligase ... 212 2.5e-17 1
DICTYBASE|DDB_G0273251 - symbol:fpaB-1 "ubiquitin ligase ... 212 2.5e-17 1
TAIR|locus:2093084 - symbol:SK9 "AT3G21850" species:3702 ... 212 2.5e-17 1
UNIPROTKB|Q5ZKF5 - symbol:SKP1 "S-phase kinase-associated... 210 4.1e-17 1
UNIPROTKB|Q3ZCF3 - symbol:SKP1 "S-phase kinase-associated... 210 4.1e-17 1
UNIPROTKB|F8W8N3 - symbol:SKP1 "S-phase kinase-associated... 210 4.1e-17 1
UNIPROTKB|P63208 - symbol:SKP1 "S-phase kinase-associated... 210 4.1e-17 1
UNIPROTKB|P63209 - symbol:SKP1 "S-phase kinase-associated... 210 4.1e-17 1
UNIPROTKB|Q4R5B9 - symbol:SKP1 "S-phase kinase-associated... 210 4.1e-17 1
UNIPROTKB|Q5R512 - symbol:SKP1 "S-phase kinase-associated... 210 4.1e-17 1
UNIPROTKB|Q71U00 - symbol:skp1 "S-phase kinase-associated... 210 4.1e-17 1
MGI|MGI:103575 - symbol:Skp1a "S-phase kinase-associated ... 210 4.1e-17 1
RGD|1359648 - symbol:Skp1 "S-phase kinase-associated prot... 210 4.1e-17 1
ZFIN|ZDB-GENE-040426-1707 - symbol:skp1 "S-phase kinase-a... 207 9.0e-17 1
UNIPROTKB|E2RRW0 - symbol:SKP1 "Uncharacterized protein" ... 204 2.1e-16 1
TAIR|locus:2165825 - symbol:ASK2 "AT5G42190" species:3702... 168 4.1e-16 2
UNIPROTKB|E5RJR5 - symbol:SKP1 "S-phase kinase-associated... 196 1.9e-15 1
UNIPROTKB|G4N3J5 - symbol:MGG_04978 "E3 ubiquitin ligase ... 187 2.1e-14 1
TAIR|locus:2124281 - symbol:SK11 "AT4G34210" species:3702... 186 2.7e-14 1
UNIPROTKB|G3MZV0 - symbol:G3MZV0 "Uncharacterized protein... 184 4.6e-14 1
UNIPROTKB|E7ERH2 - symbol:SKP1 "S-phase kinase-associated... 182 7.9e-14 1
TAIR|locus:2204435 - symbol:SKP1 "AT1G75950" species:3702... 182 7.9e-14 1
TAIR|locus:2198621 - symbol:SK4 "AT1G20140" species:3702 ... 179 1.7e-13 1
TAIR|locus:2139504 - symbol:SK12 "AT4G34470" species:3702... 179 1.7e-13 1
TAIR|locus:2050281 - symbol:SK3 "AT2G25700" species:3702 ... 178 2.2e-13 1
TAIR|locus:2056956 - symbol:SK14 "AT2G03170" species:3702... 177 2.9e-13 1
FB|FBgn0025637 - symbol:skpA "skpA" species:7227 "Drosoph... 174 6.5e-13 1
FB|FBgn0026174 - symbol:skpD "skpD" species:7227 "Drosoph... 172 1.1e-12 1
TAIR|locus:2093064 - symbol:SK8 "AT3G21830" species:3702 ... 172 1.1e-12 1
ASPGD|ASPL0000044827 - symbol:sconC species:162425 "Emeri... 169 2.3e-12 1
TAIR|locus:2080542 - symbol:SK5 "AT3G60020" species:3702 ... 167 4.0e-12 1
WB|WBGene00004807 - symbol:skr-1 species:6239 "Caenorhabd... 166 5.1e-12 1
UNIPROTKB|G5ECU1 - symbol:skr-1 "Protein SKR-1" species:6... 166 5.1e-12 1
WB|WBGene00004808 - symbol:skr-2 species:6239 "Caenorhabd... 165 6.7e-12 1
UNIPROTKB|G5EDD8 - symbol:skr-2 "SKR-2" species:6239 "Cae... 165 6.7e-12 1
FB|FBgn0026175 - symbol:skpC "skpC" species:7227 "Drosoph... 164 8.6e-12 1
TAIR|locus:2093094 - symbol:SK10 "AT3G21860" species:3702... 162 1.4e-11 1
FB|FBgn0026176 - symbol:skpB "skpB" species:7227 "Drosoph... 161 1.9e-11 1
POMBASE|SPBC409.05 - symbol:skp1 "SCF ubiquitin ligase co... 161 1.9e-11 1
DICTYBASE|DDB_G0284889 - symbol:DDB_G0284889 species:4468... 135 3.3e-10 3
WB|WBGene00004809 - symbol:skr-3 species:6239 "Caenorhabd... 149 4.1e-10 1
TAIR|locus:2080532 - symbol:SK13 "AT3G60010" species:3702... 148 5.3e-10 1
FB|FBgn0034863 - symbol:skpF "skpF" species:7227 "Drosoph... 144 1.5e-09 1
FB|FBgn0031074 - symbol:skpE "skpE" species:7227 "Drosoph... 143 1.9e-09 1
SGD|S000002736 - symbol:SKP1 "Evolutionarily conserved ki... 143 1.9e-09 1
TAIR|locus:2061709 - symbol:MEO "AT2G20160" species:3702 ... 138 6.7e-09 1
TAIR|locus:2056966 - symbol:SK19 "AT2G03160" species:3702... 126 1.1e-08 2
WB|WBGene00004811 - symbol:skr-5 species:6239 "Caenorhabd... 134 1.9e-08 1
CGD|CAL0001786 - symbol:SKP1 species:5476 "Candida albica... 133 2.4e-08 1
TAIR|locus:2102370 - symbol:SK15 "AT3G25650" species:3702... 118 3.7e-08 2
WB|WBGene00004821 - symbol:skr-15 species:6239 "Caenorhab... 133 7.2e-08 1
WB|WBGene00004810 - symbol:skr-4 species:6239 "Caenorhabd... 126 1.4e-07 1
WB|WBGene00004812 - symbol:skr-6 species:6239 "Caenorhabd... 121 5.0e-07 1
TAIR|locus:2093074 - symbol:SK7 "AT3G21840" species:3702 ... 108 1.3e-05 1
WB|WBGene00004826 - symbol:skr-20 species:6239 "Caenorhab... 116 2.7e-05 1
UNIPROTKB|G5EE98 - symbol:skr-20 "Protein SKR-20" species... 116 2.7e-05 1
TAIR|locus:2056931 - symbol:SK16 "AT2G03190" species:3702... 99 7.3e-05 2
WB|WBGene00004822 - symbol:skr-16 species:6239 "Caenorhab... 112 0.00014 1
WB|WBGene00004813 - symbol:skr-7 species:6239 "Caenorhabd... 109 0.00048 1
WB|WBGene00004814 - symbol:skr-8 species:6239 "Caenorhabd... 107 0.00083 1
>TAIR|locus:505006407 [details] [associations]
symbol:SK21 "AT3G61415" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132962
GO:GO:0016567 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0006511 GO:GO:0019005 HSSP:P63208 eggNOG:COG5201
PANTHER:PTHR11165 SUPFAM:SSF81382 HOGENOM:HOG000034103
ProtClustDB:CLSN2689298 EMBL:AY084971 IPI:IPI00527962
IPI:IPI00892309 RefSeq:NP_001118876.1 RefSeq:NP_567113.1
UniGene:At.34286 ProteinModelPortal:Q8LF97 SMR:Q8LF97
EnsemblPlants:AT3G61415.1 GeneID:825314 KEGG:ath:AT3G61415
TAIR:At3g61415 InParanoid:Q8LF97 OMA:MEDDIFT PhylomeDB:Q8LF97
Genevestigator:Q8LF97 Uniprot:Q8LF97
Length = 351
Score = 1032 (368.3 bits), Expect = 3.2e-104, P = 3.2e-104
Identities = 218/353 (61%), Positives = 246/353 (69%)
Query: 1 MSEGAMAVVKPEM-KSYIWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYAISL 59
MSEG MA++KPEM KSYIW++T DGSIQQVE+EVAMFCPMIC+E+IQ G+GSSKNYAISL
Sbjct: 1 MSEGEMAIIKPEMMKSYIWLETADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNYAISL 60
Query: 60 PQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFDEKFIRMDTKKLCELTSAADSLQLKPLV 119
PQRVNPA+ L+ DYCRFHQVPGRSNKERK++DEKFIRMDTK+LCELTSAADSLQLKPLV
Sbjct: 61 PQRVNPAMLSLIFDYCRFHQVPGRSNKERKVYDEKFIRMDTKRLCELTSAADSLQLKPLV 120
Query: 120 DLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLNNVTDDPRIRLLNRLYAXXXXX 179
DLTSRALARIIEGKTPEEIRE FHLPDDLTEEEKLEPL N DDPRIRLLNRLYA
Sbjct: 121 DLTSRALARIIEGKTPEEIREIFHLPDDLTEEEKLEPLKNTMDDPRIRLLNRLYAKKRKE 180
Query: 180 XXXXXXXXXXXXXXXHVDERSVDDLLSFINGGNGDSKGIKTXXXXXXXXXXXDQLKDSST 239
HVDERSVDDLLSFING D K +KT +Q SS
Sbjct: 181 LKEREKLKSVEVEE-HVDERSVDDLLSFINGR--DPKVVKTSKSKKKNKKRKEQKNGSSN 237
Query: 240 NNLNGNHKEFNSLHSAFHNGGLNDIAVSTPHKTSKLQCSTAVTCSPKMEFXXXXXXXXXX 299
K+ ++L S + + D S S L +PK EF
Sbjct: 238 GTCEALEKDLHNLDSKSQSAEIVDNTASCLGDVSNLPSMEDDIFTPKTEFEDGYIDDEID 297
Query: 300 PAMKEELDREVEDFARRLNSDWPQRMQEILSLGQDRRLVQVSMNGNCSSRRCT 352
PA+KE LDREVEDFARRLNS W +LS+GQ+R+ V S+NGN +SRR T
Sbjct: 298 PALKELLDREVEDFARRLNSSW------VLSIGQERQPVNFSINGNGTSRRLT 344
>TAIR|locus:2050709 [details] [associations]
symbol:SK20 "AT2G45950" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
GO:GO:0019005 eggNOG:COG5201 PANTHER:PTHR11165 SUPFAM:SSF81382
EMBL:AC004665 EMBL:AF370493 EMBL:AY081697 IPI:IPI00524579
IPI:IPI00846808 IPI:IPI00877396 PIR:T02452 RefSeq:NP_001078065.1
RefSeq:NP_566058.2 UniGene:At.12716 UniGene:At.49380
ProteinModelPortal:A8MQG7 SMR:A8MQG7 IntAct:A8MQG7
EnsemblPlants:AT2G45950.2 GeneID:819203 KEGG:ath:AT2G45950
TAIR:At2g45950 HOGENOM:HOG000034103 InParanoid:A8MQG7 OMA:DEIDPAM
PhylomeDB:A8MQG7 ProtClustDB:CLSN2689298 Genevestigator:A8MQG7
Uniprot:A8MQG7
Length = 352
Score = 979 (349.7 bits), Expect = 1.3e-98, P = 1.3e-98
Identities = 215/357 (60%), Positives = 250/357 (70%)
Query: 1 MSEGAMAVVKPE-MKSYIWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYAISL 59
MSEG +AV+KPE MKSYIW+QT DGSIQQVE+EVAMFCPMIC+E+IQ G+GSSKN+AISL
Sbjct: 1 MSEGDLAVMKPETMKSYIWLQTADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNHAISL 60
Query: 60 PQRVNPAIFGLVLDYCRFHQVPGRSNKERKMFDEKFIRMDTKKLCELTSAADSLQLKPLV 119
PQRVNPA+F L+LDYCRFHQ+PGRSNKERK +DE+FIRMDTK+LCELTSAADSLQLKPLV
Sbjct: 61 PQRVNPAMFSLILDYCRFHQLPGRSNKERKTYDERFIRMDTKRLCELTSAADSLQLKPLV 120
Query: 120 DLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLNNVTDDPRIRLLNRLYAXXXXX 179
DLTSRALARIIEGK PEEIRE FHLPDDLTEEEKLEPL N DDPRIRLLNRLYA
Sbjct: 121 DLTSRALARIIEGKNPEEIREIFHLPDDLTEEEKLEPLKNSMDDPRIRLLNRLYAKKRKE 180
Query: 180 XXXXXXXXXXXXXXXHVDERSVDDLLSFINGGNGDSKGIKTXXXXXXXXXXXDQLKDSST 239
HVDERSVDDLLSFING D K +K DQ K S+
Sbjct: 181 LKERERLKNVEVEE-HVDERSVDDLLSFINGR--DHKAVKMSKGKKKKKKKKDQ-KIVSS 236
Query: 240 NNLNGNHKEFNSLHSAFHNGGLNDIAVSTPHKTSKLQCSTAVTCSPKMEFXXXXXXXXXX 299
NN++ KE + L S + +I S + L ++ +P
Sbjct: 237 NNIHD--KESHDLRSK--QQCVEEIGSSMREVPNLLSAEDDIS-TPNAGSEDEDIDDEID 291
Query: 300 PAMKEELDREVEDFARRLNSDWPQRMQEILSLGQDRRLVQVSMNGNCSSRRCTSLDS 356
PAM+E LDREVEDFA+RLNS+W + SLG++RR V S+NGN ++RR T + S
Sbjct: 292 PAMRELLDREVEDFAQRLNSNW------VRSLGKERRPVHFSINGNGTTRRHTGMVS 342
>DICTYBASE|DDB_G0269230 [details] [associations]
symbol:fpaA "ubiquitin ligase subunit SKP1"
species:44689 "Dictyostelium discoideum" [GO:0005515 "protein
binding" evidence=IPI] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0005938 "cell cortex" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016567 "protein ubiquitination"
evidence=TAS] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 dictyBase:DDB_G0269230
GO:GO:0005938 GO:GO:0005634 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0030587 GO:GO:0006511
GO:GO:0019005 eggNOG:COG5201 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 EMBL:U18063
EMBL:U73685 PIR:A55969 RefSeq:XP_646453.1 ProteinModelPortal:P52285
SMR:P52285 IntAct:P52285 GlycoSuiteDB:P52285 PRIDE:P52285
EnsemblProtists:DDB0191107 GeneID:8617413 KEGG:ddi:DDB_G0269230
OMA:KNWDADF ProtClustDB:CLSZ2729221 Uniprot:P52285
Length = 162
Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 58/161 (36%), Positives = 91/161 (56%)
Query: 15 SYIWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDY 74
S + ++++D + ++E+E+A I + +I+ +G S + I LP V I VLDY
Sbjct: 2 SLVKLESSDEKVFEIEKEIACMSVTI-KNMIED-IGESDS-PIPLPN-VTSTILEKVLDY 57
Query: 75 CRFH-QVP---GRSNKERKM------FDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSR 124
CR H Q P G K+ K +D F ++D L EL AA+ L +KPL+D+T +
Sbjct: 58 CRHHHQHPSPQGDDKKDEKRLDDIPPYDRDFCKVDQPTLFELILAANYLDIKPLLDVTCK 117
Query: 125 ALARIIEGKTPEEIRETFHLPDDLT--EEEKLEPLNNVTDD 163
+A +I GKTPEEIR+ F++ +D T EEE++ N +D
Sbjct: 118 TVANMIRGKTPEEIRKIFNIKNDFTPEEEEQIRKENEWCED 158
>DICTYBASE|DDB_G0273615 [details] [associations]
symbol:fpaB-2 "ubiquitin ligase subunit SKP1"
species:44689 "Dictyostelium discoideum" [GO:0030587 "sorocarp
development" evidence=IMP] [GO:0005938 "cell cortex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0016567 "protein
ubiquitination" evidence=TAS] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 dictyBase:DDB_G0273615
dictyBase:DDB_G0273251 GO:GO:0005938 GO:GO:0005634
GenomeReviews:CM000151_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0030587 EMBL:AAFI02000011
EMBL:AAFI02000009 GO:GO:0006511 GO:GO:0019005 HSSP:P63208
eggNOG:COG5201 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 PIR:A55969
ProtClustDB:CLSZ2729221 EMBL:U73686 RefSeq:XP_644424.1
RefSeq:XP_644826.1 ProteinModelPortal:Q557E4 SMR:Q557E4
PRIDE:Q557E4 EnsemblProtists:DDB0185043 EnsemblProtists:DDB0266780
GeneID:8618928 GeneID:8619049 KEGG:ddi:DDB_G0273251
KEGG:ddi:DDB_G0273615 OMA:VIQWCTY Uniprot:Q557E4
Length = 162
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 58/161 (36%), Positives = 91/161 (56%)
Query: 15 SYIWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDY 74
S + ++++D + ++E+E+A I + +I+ +G S + I LP V I VLDY
Sbjct: 2 SLVKLESSDEKVFEIEKEIACMSVTI-KNMIED-IGES-DAPIPLPN-VTSTILEKVLDY 57
Query: 75 CRFH-QVP---GRSNKERKM------FDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSR 124
CR H Q P G K+ K +D F ++D L EL AA+ L +KPL+D+T +
Sbjct: 58 CRHHHQHPSPQGDDKKDEKRLDDIPPYDRDFCKVDQPTLFELILAANYLDIKPLLDVTCK 117
Query: 125 ALARIIEGKTPEEIRETFHLPDDLT--EEEKLEPLNNVTDD 163
+A +I GKTPEEIR+ F++ +D T EEE++ N +D
Sbjct: 118 TVANMIRGKTPEEIRKIFNIKNDFTPEEEEQIRKENEWCED 158
>DICTYBASE|DDB_G0273251 [details] [associations]
symbol:fpaB-1 "ubiquitin ligase subunit SKP1"
species:44689 "Dictyostelium discoideum" [GO:0030587 "sorocarp
development" evidence=IMP] [GO:0005938 "cell cortex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0016567 "protein
ubiquitination" evidence=TAS] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 dictyBase:DDB_G0273615
dictyBase:DDB_G0273251 GO:GO:0005938 GO:GO:0005634
GenomeReviews:CM000151_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0030587 EMBL:AAFI02000011
EMBL:AAFI02000009 GO:GO:0006511 GO:GO:0019005 HSSP:P63208
eggNOG:COG5201 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 PIR:A55969
ProtClustDB:CLSZ2729221 EMBL:U73686 RefSeq:XP_644424.1
RefSeq:XP_644826.1 ProteinModelPortal:Q557E4 SMR:Q557E4
PRIDE:Q557E4 EnsemblProtists:DDB0185043 EnsemblProtists:DDB0266780
GeneID:8618928 GeneID:8619049 KEGG:ddi:DDB_G0273251
KEGG:ddi:DDB_G0273615 OMA:VIQWCTY Uniprot:Q557E4
Length = 162
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 58/161 (36%), Positives = 91/161 (56%)
Query: 15 SYIWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDY 74
S + ++++D + ++E+E+A I + +I+ +G S + I LP V I VLDY
Sbjct: 2 SLVKLESSDEKVFEIEKEIACMSVTI-KNMIED-IGES-DAPIPLPN-VTSTILEKVLDY 57
Query: 75 CRFH-QVP---GRSNKERKM------FDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSR 124
CR H Q P G K+ K +D F ++D L EL AA+ L +KPL+D+T +
Sbjct: 58 CRHHHQHPSPQGDDKKDEKRLDDIPPYDRDFCKVDQPTLFELILAANYLDIKPLLDVTCK 117
Query: 125 ALARIIEGKTPEEIRETFHLPDDLT--EEEKLEPLNNVTDD 163
+A +I GKTPEEIR+ F++ +D T EEE++ N +D
Sbjct: 118 TVANMIRGKTPEEIRKIFNIKNDFTPEEEEQIRKENEWCED 158
>TAIR|locus:2093084 [details] [associations]
symbol:SK9 "AT3G21850" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051510
"regulation of unidimensional cell growth" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 GO:GO:0007346 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0016567 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
EMBL:AB025634 GO:GO:0006511 HSSP:P63208 eggNOG:COG5201
HOGENOM:HOG000172184 KO:K03094 ProtClustDB:CLSN2688652
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 EMBL:DQ446683 EMBL:DQ653099 IPI:IPI00543724
RefSeq:NP_566694.1 UniGene:At.70382 ProteinModelPortal:Q9LSX9
SMR:Q9LSX9 IntAct:Q9LSX9 STRING:Q9LSX9 PaxDb:Q9LSX9 PRIDE:Q9LSX9
EnsemblPlants:AT3G21850.1 GeneID:821739 KEGG:ath:AT3G21850
TAIR:At3g21850 InParanoid:Q9LSX9 OMA:ARQCQII Genevestigator:Q9LSX9
Uniprot:Q9LSX9
Length = 153
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 51/140 (36%), Positives = 79/140 (56%)
Query: 17 IWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCR 76
I ++++DG +VEEE A C +I I + I LP V I +V++YC
Sbjct: 6 IILKSSDGHSFEVEEEAARQCQII---IAHMSENDCTDNGIPLPN-VTGKILAMVIEYCN 61
Query: 77 FHQVPGR---SNKERKMFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGK 133
H V S+ + K +D++F+ DT + +L AA+ L +K L DL + +A II+G
Sbjct: 62 KHHVDAANPCSDDDLKKWDKEFMEKDTSTIFDLIKAANYLNIKSLFDLACQTVAEIIKGN 121
Query: 134 TPEEIRETFHLPDDLTEEEK 153
TPE+IRE F++ +DLT EE+
Sbjct: 122 TPEQIREFFNIENDLTPEEE 141
>UNIPROTKB|Q5ZKF5 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9031 "Gallus gallus" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0031519 "PcG protein complex"
evidence=IEA] [GO:0035518 "histone H2A monoubiquitination"
evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=ISS] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
UniPathway:UPA00143 GO:GO:0005829 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 GO:GO:0019005
GO:GO:0004842 HSSP:P63208 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GO:GO:0035518 GO:GO:0031519 OMA:VIQWCTY CTD:6500
GeneTree:ENSGT00390000012652 HOVERGEN:HBG057008 OrthoDB:EOG498V26
EMBL:AJ720129 IPI:IPI00591045 RefSeq:NP_001006153.1
UniGene:Gga.1718 ProteinModelPortal:Q5ZKF5 SMR:Q5ZKF5 STRING:Q5ZKF5
PRIDE:Q5ZKF5 Ensembl:ENSGALT00000010461 GeneID:416319
KEGG:gga:416319 InParanoid:Q5ZKF5 NextBio:20819793 Uniprot:Q5ZKF5
Length = 163
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 54/150 (36%), Positives = 89/150 (59%)
Query: 17 IWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSS-KNYAISLPQRVNPAIFGLVLDYC 75
I +Q++DG I +V+ E+A I + GM + + LP VN AI V+ +C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPN-VNAAILKKVIQWC 62
Query: 76 RFHQ---VPGRS--NKERK-----MFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRA 125
H+ P NKE++ ++D++F+++D L EL AA+ L +K L+D+T +
Sbjct: 63 THHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKT 122
Query: 126 LARIIEGKTPEEIRETFHLPDDLTEEEKLE 155
+A +I+GKTPEEIR+TF++ +D TEEE+ +
Sbjct: 123 VANMIKGKTPEEIRKTFNIKNDFTEEEEAQ 152
>UNIPROTKB|Q3ZCF3 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9913 "Bos taurus" [GO:0005829 "cytosol" evidence=ISS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA] [GO:0031519 "PcG protein complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
UniPathway:UPA00143 GO:GO:0005829 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0019005 GO:GO:0004842
HSSP:P63208 eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GO:GO:0035518 GO:GO:0031519 GO:GO:0031146
OMA:VIQWCTY EMBL:BT029901 EMBL:BC102435 IPI:IPI00699118
RefSeq:NP_001029953.1 UniGene:Bt.87240 ProteinModelPortal:Q3ZCF3
SMR:Q3ZCF3 STRING:Q3ZCF3 PRIDE:Q3ZCF3 Ensembl:ENSBTAT00000035306
GeneID:615427 KEGG:bta:615427 CTD:6500 GeneTree:ENSGT00390000012652
HOVERGEN:HBG057008 InParanoid:Q3ZCF3 OrthoDB:EOG498V26
NextBio:20899611 Uniprot:Q3ZCF3
Length = 163
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 54/150 (36%), Positives = 89/150 (59%)
Query: 17 IWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSS-KNYAISLPQRVNPAIFGLVLDYC 75
I +Q++DG I +V+ E+A I + GM + + LP VN AI V+ +C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPN-VNAAILKKVIQWC 62
Query: 76 RFHQ---VPGRS--NKERK-----MFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRA 125
H+ P NKE++ ++D++F+++D L EL AA+ L +K L+D+T +
Sbjct: 63 THHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKT 122
Query: 126 LARIIEGKTPEEIRETFHLPDDLTEEEKLE 155
+A +I+GKTPEEIR+TF++ +D TEEE+ +
Sbjct: 123 VANMIKGKTPEEIRKTFNIKNDFTEEEEAQ 152
>UNIPROTKB|F8W8N3 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0006511 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 HGNC:HGNC:10899 ChiTaRS:SKP1
EMBL:AC104109 EMBL:AC011336 IPI:IPI00985006
ProteinModelPortal:F8W8N3 SMR:F8W8N3 Ensembl:ENST00000328392
ArrayExpress:F8W8N3 Bgee:F8W8N3 Uniprot:F8W8N3
Length = 158
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 54/150 (36%), Positives = 89/150 (59%)
Query: 17 IWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSS-KNYAISLPQRVNPAIFGLVLDYC 75
I +Q++DG I +V+ E+A I + GM + + LP VN AI V+ +C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPN-VNAAILKKVIQWC 62
Query: 76 RFHQ---VPGRS--NKERK-----MFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRA 125
H+ P NKE++ ++D++F+++D L EL AA+ L +K L+D+T +
Sbjct: 63 THHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKT 122
Query: 126 LARIIEGKTPEEIRETFHLPDDLTEEEKLE 155
+A +I+GKTPEEIR+TF++ +D TEEE+ +
Sbjct: 123 VANMIKGKTPEEIRKTFNIKNDFTEEEEAQ 152
>UNIPROTKB|P63208 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9606 "Homo sapiens" [GO:0005515 "protein binding"
evidence=IPI] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0035518
"histone H2A monoubiquitination" evidence=IDA] [GO:0031519 "PcG
protein complex" evidence=IDA] [GO:0000080 "G1 phase of mitotic
cell cycle" evidence=TAS] [GO:0000082 "G1/S transition of mitotic
cell cycle" evidence=TAS] [GO:0000084 "S phase of mitotic cell
cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0007219 "Notch signaling pathway" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0051437 "positive regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051439
"regulation of ubiquitin-protein ligase activity involved in
mitotic cell cycle" evidence=TAS] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005829
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0016032 EMBL:CH471062
GO:GO:0000082 GO:GO:0007219 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0019005 GO:GO:0004842 GO:GO:0000084
GO:GO:0031145 GO:GO:0051437 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GO:GO:0000080 GO:GO:0035518 Reactome:REACT_24941
GO:GO:0031146 PDB:2AST PDBsum:2AST PDB:2ASS PDBsum:2ASS PDB:1P22
PDBsum:1P22 PDB:1LDK PDBsum:1LDK PDB:2E31 PDB:2E32 PDBsum:2E31
PDBsum:2E32 PDB:3L2O PDBsum:3L2O PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR OMA:VIQWCTY CTD:6500
HOVERGEN:HBG057008 OrthoDB:EOG498V26 EMBL:U33760 EMBL:Z47087
EMBL:BC009839 EMBL:BC020798 EMBL:BC025673 EMBL:BC065730 EMBL:U37558
IPI:IPI00172421 IPI:IPI00301364 PIR:I39170 RefSeq:NP_008861.2
RefSeq:NP_733779.1 UniGene:Hs.171626 PDB:1FQV PDB:1FS1 PDB:1FS2
PDBsum:1FQV PDBsum:1FS1 PDBsum:1FS2 ProteinModelPortal:P63208
SMR:P63208 DIP:DIP-31606N IntAct:P63208 MINT:MINT-5001195
STRING:P63208 PhosphoSite:P63208 DMDM:52783797 SWISS-2DPAGE:P63208
PaxDb:P63208 PeptideAtlas:P63208 PRIDE:P63208 DNASU:6500
Ensembl:ENST00000353411 Ensembl:ENST00000517625
Ensembl:ENST00000522552 Ensembl:ENST00000522855 GeneID:6500
KEGG:hsa:6500 UCSC:uc003kzc.4 UCSC:uc003kzd.4 GeneCards:GC05M133521
H-InvDB:HIX0129723 HGNC:HGNC:10899 HPA:CAB012982 MIM:601434
neXtProt:NX_P63208 PharmGKB:PA162403424 InParanoid:P63208
PhylomeDB:P63208 ChiTaRS:SKP1 EvolutionaryTrace:P63208
GenomeRNAi:6500 NextBio:25267 ArrayExpress:P63208 Bgee:P63208
CleanEx:HS_SKP1 Genevestigator:P63208 GermOnline:ENSG00000113558
Uniprot:P63208
Length = 163
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 54/150 (36%), Positives = 89/150 (59%)
Query: 17 IWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSS-KNYAISLPQRVNPAIFGLVLDYC 75
I +Q++DG I +V+ E+A I + GM + + LP VN AI V+ +C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPN-VNAAILKKVIQWC 62
Query: 76 RFHQ---VPGRS--NKERK-----MFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRA 125
H+ P NKE++ ++D++F+++D L EL AA+ L +K L+D+T +
Sbjct: 63 THHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKT 122
Query: 126 LARIIEGKTPEEIRETFHLPDDLTEEEKLE 155
+A +I+GKTPEEIR+TF++ +D TEEE+ +
Sbjct: 123 VANMIKGKTPEEIRKTFNIKNDFTEEEEAQ 152
>UNIPROTKB|P63209 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:10141 "Cavia porcellus" [GO:0005829 "cytosol" evidence=ISS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0019005
eggNOG:COG5201 HOGENOM:HOG000172184 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 GO:GO:0031146
CTD:6500 HOVERGEN:HBG057008 OrthoDB:EOG498V26 EMBL:Z35481
PIR:A57630 RefSeq:NP_001166486.1 ProteinModelPortal:P63209
SMR:P63209 MINT:MINT-108497 STRING:P63209 PRIDE:P63209
GeneID:100135616 InParanoid:P63209 Uniprot:P63209
Length = 163
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 54/150 (36%), Positives = 89/150 (59%)
Query: 17 IWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSS-KNYAISLPQRVNPAIFGLVLDYC 75
I +Q++DG I +V+ E+A I + GM + + LP VN AI V+ +C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPN-VNAAILKKVIQWC 62
Query: 76 RFHQ---VPGRS--NKERK-----MFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRA 125
H+ P NKE++ ++D++F+++D L EL AA+ L +K L+D+T +
Sbjct: 63 THHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKT 122
Query: 126 LARIIEGKTPEEIRETFHLPDDLTEEEKLE 155
+A +I+GKTPEEIR+TF++ +D TEEE+ +
Sbjct: 123 VANMIKGKTPEEIRKTFNIKNDFTEEEEAQ 152
>UNIPROTKB|Q4R5B9 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9541 "Macaca fascicularis" [GO:0005829 "cytosol"
evidence=ISS] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=ISS] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005829 GO:GO:0016567 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0019005 HSSP:P63208 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 GO:GO:0031146
HOVERGEN:HBG057008 EMBL:AB169346 EMBL:AB169625
ProteinModelPortal:Q4R5B9 SMR:Q4R5B9 PRIDE:Q4R5B9 Uniprot:Q4R5B9
Length = 163
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 54/150 (36%), Positives = 89/150 (59%)
Query: 17 IWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSS-KNYAISLPQRVNPAIFGLVLDYC 75
I +Q++DG I +V+ E+A I + GM + + LP VN AI V+ +C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPN-VNAAILKKVIQWC 62
Query: 76 RFHQ---VPGRS--NKERK-----MFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRA 125
H+ P NKE++ ++D++F+++D L EL AA+ L +K L+D+T +
Sbjct: 63 THHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKT 122
Query: 126 LARIIEGKTPEEIRETFHLPDDLTEEEKLE 155
+A +I+GKTPEEIR+TF++ +D TEEE+ +
Sbjct: 123 VANMIKGKTPEEIRKTFNIKNDFTEEEEAQ 152
>UNIPROTKB|Q5R512 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9601 "Pongo abelii" [GO:0005829 "cytosol" evidence=ISS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0019005
HSSP:P63208 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 GO:GO:0031146 OMA:VIQWCTY
CTD:6500 GeneTree:ENSGT00390000012652 HOVERGEN:HBG057008
EMBL:CR860371 EMBL:CR861073 RefSeq:NP_001127637.1 UniGene:Pab.18558
ProteinModelPortal:Q5R512 SMR:Q5R512 PRIDE:Q5R512
Ensembl:ENSPPYT00000018360 GeneID:100174716 KEGG:pon:100174716
InParanoid:Q5R512 Uniprot:Q5R512
Length = 163
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 54/150 (36%), Positives = 89/150 (59%)
Query: 17 IWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSS-KNYAISLPQRVNPAIFGLVLDYC 75
I +Q++DG I +V+ E+A I + GM + + LP VN AI V+ +C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPN-VNAAILKKVIQWC 62
Query: 76 RFHQ---VPGRS--NKERK-----MFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRA 125
H+ P NKE++ ++D++F+++D L EL AA+ L +K L+D+T +
Sbjct: 63 THHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKT 122
Query: 126 LARIIEGKTPEEIRETFHLPDDLTEEEKLE 155
+A +I+GKTPEEIR+TF++ +D TEEE+ +
Sbjct: 123 VANMIKGKTPEEIRKTFNIKNDFTEEEEAQ 152
>UNIPROTKB|Q71U00 [details] [associations]
symbol:skp1 "S-phase kinase-associated protein 1"
species:8355 "Xenopus laevis" [GO:0005515 "protein binding"
evidence=IPI] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=ISS] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
UniPathway:UPA00143 GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 GO:GO:0019005
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 CTD:6500 HOVERGEN:HBG057008 EMBL:AF176352
EMBL:AF169342 EMBL:BC054184 RefSeq:NP_001080844.1 UniGene:Xl.57174
ProteinModelPortal:Q71U00 SMR:Q71U00 IntAct:Q71U00 PRIDE:Q71U00
GeneID:380538 KEGG:xla:380538 Xenbase:XB-GENE-919643 Uniprot:Q71U00
Length = 163
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 54/150 (36%), Positives = 89/150 (59%)
Query: 17 IWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSS-KNYAISLPQRVNPAIFGLVLDYC 75
I +Q++DG I +V+ E+A I + GM + + LP VN AI V+ +C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPN-VNAAILKKVIQWC 62
Query: 76 RFHQ---VPGRS--NKERK-----MFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRA 125
H+ P NKE++ ++D++F+++D L EL AA+ L +K L+D+T +
Sbjct: 63 THHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKT 122
Query: 126 LARIIEGKTPEEIRETFHLPDDLTEEEKLE 155
+A +I+GKTPEEIR+TF++ +D TEEE+ +
Sbjct: 123 VANMIKGKTPEEIRKTFNIKNDFTEEEEAQ 152
>MGI|MGI:103575 [details] [associations]
symbol:Skp1a "S-phase kinase-associated protein 1A"
species:10090 "Mus musculus" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISO;IC] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=ISO;IC] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO;IDA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO;IDA]
[GO:0035518 "histone H2A monoubiquitination" evidence=ISO]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
MGI:MGI:103575 GO:GO:0005829 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0019005 GO:GO:0004842 eggNOG:COG5201
HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 GO:GO:0035518 GO:GO:0031519
GO:GO:0031146 OMA:VIQWCTY GeneTree:ENSGT00390000012652
HOVERGEN:HBG057008 OrthoDB:EOG498V26 ChiTaRS:SKP1 EMBL:AF083214
EMBL:AK002983 EMBL:AK010628 EMBL:AK012498 EMBL:AK014245
EMBL:AK027909 EMBL:AK078330 EMBL:AK088339 EMBL:BC002115
IPI:IPI00331163 RefSeq:NP_035673.3 UniGene:Mm.42944
ProteinModelPortal:Q9WTX5 SMR:Q9WTX5 IntAct:Q9WTX5 STRING:Q9WTX5
PhosphoSite:Q9WTX5 REPRODUCTION-2DPAGE:Q9WTX5 PaxDb:Q9WTX5
PRIDE:Q9WTX5 Ensembl:ENSMUST00000037324 Ensembl:ENSMUST00000109072
GeneID:21402 KEGG:mmu:21402 CTD:21402 InParanoid:Q9WTX5
NextBio:300668 Bgee:Q9WTX5 CleanEx:MM_SKP1A Genevestigator:Q9WTX5
GermOnline:ENSMUSG00000036309 Uniprot:Q9WTX5
Length = 163
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 54/150 (36%), Positives = 89/150 (59%)
Query: 17 IWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSS-KNYAISLPQRVNPAIFGLVLDYC 75
I +Q++DG I +V+ E+A I + GM + + LP VN AI V+ +C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPN-VNAAILKKVIQWC 62
Query: 76 RFHQ---VPGRS--NKERK-----MFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRA 125
H+ P NKE++ ++D++F+++D L EL AA+ L +K L+D+T +
Sbjct: 63 THHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKT 122
Query: 126 LARIIEGKTPEEIRETFHLPDDLTEEEKLE 155
+A +I+GKTPEEIR+TF++ +D TEEE+ +
Sbjct: 123 VANMIKGKTPEEIRKTFNIKNDFTEEEEAQ 152
>RGD|1359648 [details] [associations]
symbol:Skp1 "S-phase kinase-associated protein 1" species:10116
"Rattus norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=ISO;ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;ISS]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;ISS] [GO:0031519 "PcG protein
complex" evidence=IEA;ISO] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA;ISO] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 RGD:1359648 GO:GO:0005829
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0019005
GO:GO:0004842 eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GO:GO:0035518 GO:GO:0031519 GO:GO:0031146
OMA:VIQWCTY CTD:6500 GeneTree:ENSGT00390000012652
HOVERGEN:HBG057008 OrthoDB:EOG498V26 EMBL:BC058152 IPI:IPI00369350
RefSeq:NP_001007609.1 UniGene:Rn.3477 ProteinModelPortal:Q6PEC4
SMR:Q6PEC4 DIP:DIP-29863N IntAct:Q6PEC4 STRING:Q6PEC4
PhosphoSite:Q6PEC4 PRIDE:Q6PEC4 Ensembl:ENSRNOT00000007676
GeneID:287280 KEGG:rno:287280 UCSC:RGD:1359648 InParanoid:Q6PEC4
NextBio:625795 ArrayExpress:Q6PEC4 Genevestigator:Q6PEC4
GermOnline:ENSRNOG00000005828 Uniprot:Q6PEC4
Length = 163
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 54/150 (36%), Positives = 89/150 (59%)
Query: 17 IWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSS-KNYAISLPQRVNPAIFGLVLDYC 75
I +Q++DG I +V+ E+A I + GM + + LP VN AI V+ +C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPN-VNAAILKKVIQWC 62
Query: 76 RFHQ---VPGRS--NKERK-----MFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRA 125
H+ P NKE++ ++D++F+++D L EL AA+ L +K L+D+T +
Sbjct: 63 THHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKT 122
Query: 126 LARIIEGKTPEEIRETFHLPDDLTEEEKLE 155
+A +I+GKTPEEIR+TF++ +D TEEE+ +
Sbjct: 123 VANMIKGKTPEEIRKTFNIKNDFTEEEEAQ 152
>ZFIN|ZDB-GENE-040426-1707 [details] [associations]
symbol:skp1 "S-phase kinase-associated protein 1"
species:7955 "Danio rerio" [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0016310 "phosphorylation"
evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 ZFIN:ZDB-GENE-040426-1707
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0016301
GO:GO:0006511 eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 OMA:KNWDADF CTD:6500 GeneTree:ENSGT00390000012652
HOVERGEN:HBG057008 OrthoDB:EOG498V26 EMBL:FP017197 EMBL:BC059536
EMBL:AY648843 IPI:IPI00501108 RefSeq:NP_957037.1 UniGene:Dr.83245
SMR:Q6PBY8 STRING:Q6PBY8 Ensembl:ENSDART00000008454 GeneID:393716
KEGG:dre:393716 InParanoid:Q6PBY8 NextBio:20814718 Uniprot:Q6PBY8
Length = 163
Score = 207 (77.9 bits), Expect = 9.0e-17, P = 9.0e-17
Identities = 53/150 (35%), Positives = 89/150 (59%)
Query: 17 IWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSS-KNYAISLPQRVNPAIFGLVLDYC 75
I +Q++DG + +V+ E+A I + GM + + LP VN AI V+ +C
Sbjct: 4 IKLQSSDGEMFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPN-VNAAILKKVIQWC 62
Query: 76 RFHQ---VPGRS--NKERK-----MFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRA 125
H+ P NKE++ ++D++F+++D L EL AA+ L +K L+D+T +
Sbjct: 63 THHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKT 122
Query: 126 LARIIEGKTPEEIRETFHLPDDLTEEEKLE 155
+A +I+GKTPEEIR+TF++ +D TEEE+ +
Sbjct: 123 VANMIKGKTPEEIRKTFNIKNDFTEEEEAQ 152
>UNIPROTKB|E2RRW0 [details] [associations]
symbol:SKP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035518 "histone H2A monoubiquitination"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=IEA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
GO:GO:0005829 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0006511 GO:GO:0019005 GO:GO:0004842 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 GO:GO:0035518
GO:GO:0031519 GeneTree:ENSGT00390000012652 OMA:IMNILEV
EMBL:AAEX03007782 Ensembl:ENSCAFT00000001535 Uniprot:E2RRW0
Length = 163
Score = 204 (76.9 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 53/150 (35%), Positives = 88/150 (58%)
Query: 17 IWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSS-KNYAISLPQRVNPAIFGLVLDYC 75
I + ++DG I +V+ E+A I + GM + + LP VN AI V+ +C
Sbjct: 4 IKLPSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPN-VNAAILKKVIQWC 62
Query: 76 RFHQ---VPGRS--NKERK-----MFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRA 125
H+ P NKE++ ++D++F+++D L EL AA+ L +K L+D+T +
Sbjct: 63 THHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKT 122
Query: 126 LARIIEGKTPEEIRETFHLPDDLTEEEKLE 155
+A +I+GKTPEEIR+TF++ +D TEEE+ +
Sbjct: 123 VANMIKGKTPEEIRKTFNIKNDFTEEEEAQ 152
>TAIR|locus:2165825 [details] [associations]
symbol:ASK2 "AT5G42190" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0005737
"cytoplasm" evidence=NAS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA;RCA;TAS] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009793 "embryo development ending in seed
dormancy" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0042752 "regulation of circadian rhythm"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0019048 GO:GO:0007059 GO:GO:0009734
GO:GO:0009873 GO:GO:0009793 GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 EMBL:AB017067 GO:GO:0006511
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
UniGene:At.23304 OMA:KNWDADF EMBL:U97021 EMBL:AF059295
EMBL:BT004798 EMBL:AK227773 IPI:IPI00540947 RefSeq:NP_568603.1
UniGene:At.71056 ProteinModelPortal:Q9FHW7 SMR:Q9FHW7
DIP:DIP-31326N IntAct:Q9FHW7 STRING:Q9FHW7 PaxDb:Q9FHW7
PRIDE:Q9FHW7 EnsemblPlants:AT5G42190.1 GeneID:834224
KEGG:ath:AT5G42190 GeneFarm:4982 TAIR:At5g42190 InParanoid:Q9FHW7
PhylomeDB:Q9FHW7 ProtClustDB:CLSN2917730 Genevestigator:Q9FHW7
GermOnline:AT5G42190 Uniprot:Q9FHW7
Length = 171
Score = 168 (64.2 bits), Expect = 4.1e-16, Sum P(2) = 4.1e-16
Identities = 34/74 (45%), Positives = 54/74 (72%)
Query: 82 GRSNKERKMFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRET 141
G S+++ K +D +FI++D L +L AA+ L +K L+DLT + +A +I+GKTPEEIR+T
Sbjct: 88 GSSDEDLKTWDSEFIKVDQGTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKT 147
Query: 142 FHLPDDLTEEEKLE 155
F++ +D T EE+ E
Sbjct: 148 FNIKNDFTPEEEEE 161
Score = 54 (24.1 bits), Expect = 4.1e-16, Sum P(2) = 4.1e-16
Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 17 IWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCR 76
I ++++DG +++E VA+ I + +I+ + I LP V I V++YC+
Sbjct: 7 ITLKSSDGENFEIDEAVALESQTI-KHMIEDDCTDN---GIPLPN-VTSKILSKVIEYCK 61
Query: 77 FH 78
H
Sbjct: 62 RH 63
>UNIPROTKB|E5RJR5 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0006511 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 HGNC:HGNC:10899 ChiTaRS:SKP1
EMBL:AC104109 EMBL:AC011336 IPI:IPI00974176
ProteinModelPortal:E5RJR5 SMR:E5RJR5 Ensembl:ENST00000521216
ArrayExpress:E5RJR5 Bgee:E5RJR5 Uniprot:E5RJR5
Length = 163
Score = 196 (74.1 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 51/150 (34%), Positives = 86/150 (57%)
Query: 17 IWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSS-KNYAISLPQRVNPAIFGLVLDYC 75
I +Q++DG I +V+ E+A I + GM + + LP VN AI V+ +C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPN-VNAAILKKVIQWC 62
Query: 76 RFHQ---VPGRS--NKERK-----MFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRA 125
H+ P NKE++ ++D++F++ +K AA+ L +K L+D+T +
Sbjct: 63 THHKDDPPPPEDDENKEKRTDDIPVWDQEFLKYTLRKTTVSLQAANYLDIKGLLDVTCKT 122
Query: 126 LARIIEGKTPEEIRETFHLPDDLTEEEKLE 155
+A +I+GKTPEEIR+TF++ +D TEEE+ +
Sbjct: 123 VANMIKGKTPEEIRKTFNIKNDFTEEEEAQ 152
>UNIPROTKB|G4N3J5 [details] [associations]
symbol:MGG_04978 "E3 ubiquitin ligase complex SCF subunit
scon-3" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
EMBL:CM001233 GO:GO:0016874 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0006511 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
RefSeq:XP_003712477.1 ProteinModelPortal:G4N3J5 SMR:G4N3J5
EnsemblFungi:MGG_04978T0 GeneID:2675549 KEGG:mgr:MGG_04978
Uniprot:G4N3J5
Length = 168
Score = 187 (70.9 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 50/160 (31%), Positives = 91/160 (56%)
Query: 19 VQTTDGSIQQVEEEVAMFC-PMICREII-QTGMGSSKNYAISLPQRVNPAIFGLVLDYCR 76
+Q+ DG Q +E + A+ C + +++I G + I +P V+ A+ VL++C
Sbjct: 11 LQSNDG--QSIEVDRAVACRSRLIKDLIGDLGEEMVASTPIPIPN-VSEAVLRKVLEWCE 67
Query: 77 FH-----QVPGRSNKERKM------FDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRA 125
H Q ++ RK +D+KF+++D + L E+ A++ L +KPL+D+ +
Sbjct: 68 HHRNDPVQTSDEDSESRKKTTDIDEWDQKFMQVDQEMLFEIILASNYLDIKPLLDVGCKT 127
Query: 126 LARIIEGKTPEEIRETFHLPDDLT--EEEKLEPLNNVTDD 163
+A +I+GK+PEEIR+TF++ +D T EEE++ N +D
Sbjct: 128 VANMIKGKSPEEIRKTFNITNDFTPEEEEQIRRENEWAED 167
>TAIR|locus:2124281 [details] [associations]
symbol:SK11 "AT4G34210" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 EMBL:AL021961
EMBL:AL161585 HSSP:P63208 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 EMBL:DQ446893 EMBL:DQ653243 IPI:IPI00541308
PIR:T05415 RefSeq:NP_567959.1 UniGene:At.54598
ProteinModelPortal:O49484 SMR:O49484 IntAct:O49484 STRING:O49484
EnsemblPlants:AT4G34210.1 GeneID:829569 KEGG:ath:AT4G34210
TAIR:At4g34210 InParanoid:O49484 OMA:HHVDEAN PhylomeDB:O49484
ProtClustDB:CLSN2689755 Genevestigator:O49484 Uniprot:O49484
Length = 152
Score = 186 (70.5 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 50/141 (35%), Positives = 77/141 (54%)
Query: 17 IWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYAISLP-QRVNPAIFGLVLDYC 75
I + ++DG +VEE VA+ I M A +P V I V++YC
Sbjct: 6 IVLMSSDGQSFEVEEAVAIQSQTIAH------MVEDDCVADGIPLANVESKILVKVIEYC 59
Query: 76 RFHQVPGR---SNKERKMFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEG 132
+ H V S ++ +DEKF+ ++ + EL AA+ L +K L+DLT + +A +I+G
Sbjct: 60 KKHHVDEANPISEEDLNNWDEKFMDLEQSTIFELILAANYLNIKSLLDLTCQTVADMIKG 119
Query: 133 KTPEEIRETFHLPDDLTEEEK 153
KTPEEIR TF++ +D T EE+
Sbjct: 120 KTPEEIRSTFNIENDFTPEEE 140
>UNIPROTKB|G3MZV0 [details] [associations]
symbol:G3MZV0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GeneTree:ENSGT00390000012652 OMA:IMNILEV
EMBL:DAAA02025649 PRIDE:G3MZV0 Ensembl:ENSBTAT00000063619
NextBio:20927407 Uniprot:G3MZV0
Length = 160
Score = 184 (69.8 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 52/150 (34%), Positives = 87/150 (58%)
Query: 17 IWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSS-KNYAISLPQRVNPAIFGLVLDYC 75
I +Q++DG I +V+ E+A I + GM + + LP VN AI + +C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTVLEDLGMDDEGDDDPVPLPN-VNAAI---LKKWC 59
Query: 76 RFHQ---VPGRS--NKERK-----MFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRA 125
H+ P NKE++ ++D++F+++D L EL AA+ L +K L+D+T +
Sbjct: 60 THHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKT 119
Query: 126 LARIIEGKTPEEIRETFHLPDDLTEEEKLE 155
+A +I+GKT EEIR+TF++ +D TEEE+ +
Sbjct: 120 VANMIKGKTREEIRKTFNIKNDFTEEEEAQ 149
>UNIPROTKB|E7ERH2 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9606 "Homo sapiens" [GO:0005829 "cytosol" evidence=IEA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 GO:GO:0005829 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0006511 GO:GO:0019005 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 HGNC:HGNC:10899
ChiTaRS:SKP1 EMBL:AC104109 EMBL:AC011336 IPI:IPI00979610
ProteinModelPortal:E7ERH2 SMR:E7ERH2 Ensembl:ENST00000519321
ArrayExpress:E7ERH2 Bgee:E7ERH2 Uniprot:E7ERH2
Length = 142
Score = 182 (69.1 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 49/139 (35%), Positives = 81/139 (58%)
Query: 17 IWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSS-KNYAISLPQRVNPAIFGLVLDYC 75
I +Q++DG I +V+ E+A I + GM + + LP VN AI V+ +C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPN-VNAAILKKVIQWC 62
Query: 76 RFHQ---VPGRS--NKERK-----MFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRA 125
H+ P NKE++ ++D++F+++D L EL AA+ L +K L+D+T +
Sbjct: 63 THHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKT 122
Query: 126 LARIIEGKTPEEIRETFHL 144
+A +I+GKTPEEIR+TF++
Sbjct: 123 VANMIKGKTPEEIRKTFNI 141
>TAIR|locus:2204435 [details] [associations]
symbol:SKP1 "AT1G75950" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA;NAS]
[GO:0005737 "cytoplasm" evidence=NAS] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007140 "male meiosis" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=TAS] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0045910 "negative regulation of DNA recombination"
evidence=IMP] [GO:0046686 "response to cadmium ion" evidence=IEP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0000226 "microtubule cytoskeleton organization"
evidence=IMP] [GO:0007067 "mitosis" evidence=RCA;TAS] [GO:0042023
"DNA endoreduplication" evidence=RCA] [GO:0042752 "regulation of
circadian rhythm" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051510
"regulation of unidimensional cell growth" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0007275 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005634 GO:GO:0046686 GO:GO:0019048
GO:GO:0007059 GO:GO:0000226 GO:GO:0009734 GO:GO:0009873
GO:GO:0005819 EMBL:AC007396 GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 eggNOG:COG5201
HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 GO:GO:0009524 GO:GO:0045910
PDB:3OGK PDB:3OGL PDB:3OGM PDBsum:3OGK PDBsum:3OGL PDBsum:3OGM
PDB:2P1N PDB:2P1O PDB:2P1Q PDBsum:2P1N PDBsum:2P1O PDBsum:2P1Q
EMBL:U60981 EMBL:U97020 EMBL:AF059294 EMBL:AY080884 EMBL:AY113971
EMBL:U70034 IPI:IPI00540205 PIR:T51309 RefSeq:NP_565123.1
UniGene:At.23531 PDB:2P1M PDB:2P1P PDB:3C6N PDB:3C6O PDB:3C6P
PDBsum:2P1M PDBsum:2P1P PDBsum:3C6N PDBsum:3C6O PDBsum:3C6P
ProteinModelPortal:Q39255 SMR:Q39255 DIP:DIP-31325N IntAct:Q39255
STRING:Q39255 PaxDb:Q39255 PRIDE:Q39255 EnsemblPlants:AT1G75950.1
GeneID:843928 KEGG:ath:AT1G75950 GeneFarm:4981 TAIR:At1g75950
InParanoid:Q39255 OMA:DDLKAWD PhylomeDB:Q39255
EvolutionaryTrace:Q39255 Genevestigator:Q39255 GermOnline:AT1G75950
Uniprot:Q39255
Length = 160
Score = 182 (69.1 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 52/150 (34%), Positives = 82/150 (54%)
Query: 17 IWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCR 76
I ++++DG +VEE VA+ I + + + + LP V I V++YC+
Sbjct: 6 IVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNG----VPLPN-VTSKILAKVIEYCK 60
Query: 77 FH---------QVPGR--SNKERKMFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRA 125
H V G S+ + K +D F+++D L EL AA+ L +K L+DLT +
Sbjct: 61 RHVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQT 120
Query: 126 LARIIEGKTPEEIRETFHLPDDLTEEEKLE 155
+A +I+GKTPEEIR TF++ +D T EE+ E
Sbjct: 121 VADMIKGKTPEEIRTTFNIKNDFTPEEEEE 150
>TAIR|locus:2198621 [details] [associations]
symbol:SK4 "AT1G20140" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005737 GO:GO:0005730
GO:GO:0016567 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0006511 GO:GO:0019005 EMBL:AC022472 HSSP:P63208
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
UniGene:At.26484 ProtClustDB:CLSN2687877 EMBL:AY058205
EMBL:AY098980 IPI:IPI00526578 PIR:B86335 RefSeq:NP_564105.1
UniGene:At.26612 ProteinModelPortal:Q9LNT9 SMR:Q9LNT9 IntAct:Q9LNT9
STRING:Q9LNT9 PRIDE:Q9LNT9 EnsemblPlants:AT1G20140.1 GeneID:838604
KEGG:ath:AT1G20140 TAIR:At1g20140 InParanoid:Q9LNT9 OMA:SAENDEL
Genevestigator:Q9LNT9 Uniprot:Q9LNT9
Length = 163
Score = 179 (68.1 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 52/159 (32%), Positives = 85/159 (53%)
Query: 12 EMKSYIWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLV 71
E K I ++++DG ++EE VA+ I + +I+ + I LP V AI V
Sbjct: 3 ETKKMIILKSSDGESFEIEEAVAVKSQTI-KHMIEDDCADN---GIPLPN-VTGAILAKV 57
Query: 72 LDYCRFH-----QVPG-------RSNKERKMFDEKFIRMDTKKLCELTSAADSLQLKPLV 119
++YC+ H + G N E K +D +F+++D L +L AA+ L + L+
Sbjct: 58 IEYCKKHVEAAAEAGGDKDFYGSAENDELKNWDSEFVKVDQPTLFDLILAANYLNIGGLL 117
Query: 120 DLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLN 158
DLT +A+A + GKTPE++R F++ +D T EE+ E N
Sbjct: 118 DLTCKAVADQMRGKTPEQMRAHFNIKNDYTPEEEAEVRN 156
>TAIR|locus:2139504 [details] [associations]
symbol:SK12 "AT4G34470" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISS]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 EMBL:AL161585
EMBL:AL023094 HSSP:P63208 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 ProtClustDB:CLSN2689755 IPI:IPI00526402 PIR:T05267
RefSeq:NP_567967.1 UniGene:At.65453 ProteinModelPortal:O65674
SMR:O65674 IntAct:O65674 STRING:O65674 EnsemblPlants:AT4G34470.1
GeneID:829598 KEGG:ath:AT4G34470 TAIR:At4g34470 InParanoid:O65674
OMA:IRRAFNI PhylomeDB:O65674 Genevestigator:O65674 Uniprot:O65674
Length = 152
Score = 179 (68.1 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 49/141 (34%), Positives = 76/141 (53%)
Query: 17 IWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYAISLP-QRVNPAIFGLVLDYC 75
I + ++DG +VEE VA+ I M A +P V I V++YC
Sbjct: 6 IVLMSSDGQSFEVEEAVAIQSQTIAH------MVEDDCVADGIPLANVESKILVKVIEYC 59
Query: 76 RFHQVPGR---SNKERKMFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEG 132
+ + V S ++ +DEKF+ ++ + EL AA+ L +K L DLT + +A +I+G
Sbjct: 60 KKYHVDEANPISEEDLNKWDEKFMDLEQSTIFELILAANYLNIKSLFDLTCQTVADMIKG 119
Query: 133 KTPEEIRETFHLPDDLTEEEK 153
KTPEEIR TF++ +D T EE+
Sbjct: 120 KTPEEIRSTFNIENDFTPEEE 140
>TAIR|locus:2050281 [details] [associations]
symbol:SK3 "AT2G25700" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 HSSP:P63208
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 EMBL:AC006053
EMBL:AY052700 EMBL:AY139806 IPI:IPI00526397 PIR:F84651
RefSeq:NP_565604.1 UniGene:At.26484 ProteinModelPortal:Q9SL93
SMR:Q9SL93 IntAct:Q9SL93 STRING:Q9SL93 EnsemblPlants:AT2G25700.1
GeneID:817111 KEGG:ath:AT2G25700 TAIR:At2g25700 InParanoid:Q9SL93
OMA:CCKTIAN ProtClustDB:CLSN2687877 Genevestigator:Q9SL93
Uniprot:Q9SL93
Length = 163
Score = 178 (67.7 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 53/159 (33%), Positives = 84/159 (52%)
Query: 12 EMKSYIWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLV 71
E K I ++++DG +VEE VA+ I + +I+ + I LP V AI V
Sbjct: 3 ETKKMIILKSSDGESFEVEEAVAVESQTI-KHMIEDDCVDN---GIPLPN-VTGAILAKV 57
Query: 72 LDYCRFH-----QVPG-------RSNKERKMFDEKFIRMDTKKLCELTSAADSLQLKPLV 119
++YC+ H + G N E K +D F+++D L +L AA+ L + L+
Sbjct: 58 IEYCKKHVEAAAEAGGDKDFYGSTENHELKTWDNDFVKVDHPTLFDLLRAANYLNISGLL 117
Query: 120 DLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLN 158
DLT +A+A + GKTP ++RE F++ +D T EE+ E N
Sbjct: 118 DLTCKAVADQMRGKTPAQMREHFNIKNDYTPEEEAEVRN 156
>TAIR|locus:2056956 [details] [associations]
symbol:SK14 "AT2G03170" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 HSSP:P63208
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 EMBL:AC005313
EMBL:DQ056526 IPI:IPI00517714 PIR:T02709 RefSeq:NP_565296.1
UniGene:At.52615 ProteinModelPortal:O81057 SMR:O81057 IntAct:O81057
STRING:O81057 PaxDb:O81057 PRIDE:O81057 EnsemblPlants:AT2G03170.1
GeneID:814846 KEGG:ath:AT2G03170 TAIR:At2g03170 InParanoid:O81057
OMA:KTWDEEF PhylomeDB:O81057 ProtClustDB:CLSN2687939
Genevestigator:O81057 Uniprot:O81057
Length = 149
Score = 177 (67.4 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 48/138 (34%), Positives = 82/138 (59%)
Query: 17 IWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCR 76
I + ++DG +VEE VA ++ +I+ ++ + L Q V I +V++YC+
Sbjct: 6 IVLSSSDGESFEVEEAVARKLKIV-EHMIEDDCVVTE---VPL-QNVTGKILSIVVEYCK 60
Query: 77 FHQVPGRSNKERKMFDEKFIR-MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTP 135
H V S+ E K +DE+F++ D + +L AA+ L +K L+DL+++ +A I+ KTP
Sbjct: 61 KHVVDEESD-EFKTWDEEFMKKFDQPTVFQLLLAANYLNIKGLLDLSAQTVADRIKDKTP 119
Query: 136 EEIRETFHLPDDLTEEEK 153
EEIRE F++ +D T EE+
Sbjct: 120 EEIREIFNIENDFTPEEE 137
>FB|FBgn0025637 [details] [associations]
symbol:skpA "skpA" species:7227 "Drosophila melanogaster"
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0051298 "centrosome duplication" evidence=IMP]
[GO:0030261 "chromosome condensation" evidence=IMP] [GO:0042023
"DNA endoreduplication" evidence=IMP] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IDA;NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0005819 "spindle"
evidence=IDA] [GO:0005813 "centrosome" evidence=IDA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0010824
"regulation of centrosome duplication" evidence=IMP] [GO:0007067
"mitosis" evidence=IMP] [GO:0031647 "regulation of protein
stability" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007095 "mitotic G2 DNA damage checkpoint"
evidence=IGI] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 GO:GO:0005813 GO:GO:0005875
GO:GO:0007095 GO:GO:0007067 GO:GO:0051298 GO:GO:0022008
GO:GO:0005819 GO:GO:0045931 EMBL:AE014298 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0031647 GO:GO:0006511
GO:GO:0019005 GO:GO:0030261 eggNOG:COG5201 KO:K03094
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GO:GO:0042023 EMBL:AL031581 GO:GO:0010824
OMA:VIQWCTY GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:AF220066
EMBL:AY069297 EMBL:BT099582 EMBL:BT099610 PIR:T13390
RefSeq:NP_001033818.1 RefSeq:NP_477390.1 RefSeq:NP_726690.1
RefSeq:NP_726691.1 RefSeq:NP_726692.1 RefSeq:NP_726693.1
RefSeq:NP_726694.1 RefSeq:NP_726695.1 UniGene:Dm.7039 SMR:O77430
DIP:DIP-18869N IntAct:O77430 MINT:MINT-318247 STRING:O77430
EnsemblMetazoa:FBtr0070123 EnsemblMetazoa:FBtr0070124
EnsemblMetazoa:FBtr0070125 EnsemblMetazoa:FBtr0070126
EnsemblMetazoa:FBtr0070127 EnsemblMetazoa:FBtr0070128
EnsemblMetazoa:FBtr0070129 EnsemblMetazoa:FBtr0100530 GeneID:31016
KEGG:dme:Dmel_CG16983 UCSC:CG16983-RA CTD:31016 FlyBase:FBgn0025637
InParanoid:O77430 OrthoDB:EOG4BG7CC GenomeRNAi:31016 NextBio:771500
Uniprot:O77430
Length = 162
Score = 174 (66.3 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 50/154 (32%), Positives = 83/154 (53%)
Query: 17 IWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCR 76
I +Q++D I + ++A I + GM +N + LP VN I VL +
Sbjct: 4 IKLQSSDEEIFDTDIQIAKCSGTIKTMLEDCGMEDDENAIVPLPN-VNSTILRKVLTWAH 62
Query: 77 FHQ---VPGRSN--KERKM-----FDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRAL 126
+H+ P + KE++ +D F+++D L EL AA+ L +K L++LT + +
Sbjct: 63 YHKDDPQPTEDDESKEKRTDDIISWDADFLKVDQGTLFELILAANYLDIKGLLELTCKTV 122
Query: 127 ARIIEGKTPEEIRETFHLPDDLT--EEEKLEPLN 158
A +I+GKTPEEIR+TF++ D + EEE++ N
Sbjct: 123 ANMIKGKTPEEIRKTFNIKKDFSPAEEEQVRKEN 156
>FB|FBgn0026174 [details] [associations]
symbol:skpD "skpD" species:7227 "Drosophila melanogaster"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 HSSP:P34991 EMBL:AY070797 ProteinModelPortal:Q8T976
STRING:Q8T976 FlyBase:FBgn0026174 InParanoid:Q8T976
OrthoDB:EOG4K6DMM Bgee:Q8T976 Uniprot:Q8T976
Length = 182
Score = 172 (65.6 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 49/151 (32%), Positives = 80/151 (52%)
Query: 10 KPEMKS-YIWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYAISLPQRVNPAIF 68
KP+M + I ++++DG I E + A I + + + + +N + LP +VN I
Sbjct: 22 KPKMDAPTIKLESSDGVIFSTEVKAAKLSETIKTMLEVSAVENDENAVVPLP-KVNAFIL 80
Query: 69 GLVLDYCRFH-----------QVPGRSNKERKMFDEKFIRMDTKKLCELTSAADSLQLKP 117
+L + H ++ +S + +D FI +D L E+T AA+ L++K
Sbjct: 81 DKILTWAYHHKDDDDQAAEGEELTPQSPHDISPWDANFINVDQPILFEITVAANYLEIKG 140
Query: 118 LVDLTSRALARIIEGKTPEEIRETFHLPDDL 148
L DL + LA +I GKTPEEIR+TF++ DDL
Sbjct: 141 LEDLCCKTLANMIRGKTPEEIRQTFNIEDDL 171
>TAIR|locus:2093064 [details] [associations]
symbol:SK8 "AT3G21830" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 EMBL:AB025634
GO:GO:0006511 GO:GO:0019005 HSSP:P63208 eggNOG:COG5201
HOGENOM:HOG000172184 KO:K03094 ProtClustDB:CLSN2688652
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 EMBL:DQ056601 IPI:IPI00519509 RefSeq:NP_566692.1
UniGene:At.62404 ProteinModelPortal:Q9LSY1 SMR:Q9LSY1 IntAct:Q9LSY1
EnsemblPlants:AT3G21830.1 GeneID:821737 KEGG:ath:AT3G21830
TAIR:At3g21830 InParanoid:Q9LSY1 OMA:HNEALNE Genevestigator:Q9LSY1
Uniprot:Q9LSY1
Length = 152
Score = 172 (65.6 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 42/140 (30%), Positives = 80/140 (57%)
Query: 17 IWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCR 76
I +++++G ++EEE A C I +I+ + N + L ++ I +V++YC
Sbjct: 6 IMLKSSEGKTFEIEEETARQCQTIAH-MIEAEC--TDNVILVL--KMTSEILEMVIEYCN 60
Query: 77 FHQVPGR---SNKERKMFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGK 133
H V S+ + + +D++F+ D + LT+AA+ L K L+ L + +A +I+G
Sbjct: 61 KHHVDAANPCSDDDLEKWDKEFMEKDKSTIFALTNAANFLNNKSLLHLAGQTVADMIKGN 120
Query: 134 TPEEIRETFHLPDDLTEEEK 153
TP+++RE F++ +DLT EE+
Sbjct: 121 TPKQMREFFNIENDLTPEEE 140
>ASPGD|ASPL0000044827 [details] [associations]
symbol:sconC species:162425 "Emericella nidulans"
[GO:0006790 "sulfur compound metabolic process" evidence=IEP]
[GO:0045116 "protein neddylation" evidence=IEA] [GO:0007095
"mitotic G2 DNA damage checkpoint" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0007035 "vacuolar acidification" evidence=IEA] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045841 "negative regulation of mitotic metaphase/anaphase
transition" evidence=IEA] [GO:0000920 "cytokinetic cell separation"
evidence=IEA] [GO:0000921 "septin ring assembly" evidence=IEA]
[GO:0006998 "nuclear envelope organization" evidence=IEA]
[GO:0051382 "kinetochore assembly" evidence=IEA] [GO:0042493
"response to drug" evidence=IEA] [GO:0043254 "regulation of protein
complex assembly" evidence=IEA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0007096 "regulation of exit
from mitosis" evidence=IEA] [GO:0003688 "DNA replication origin
binding" evidence=IEA] [GO:0043295 "glutathione binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043291 "RAVE
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031518 "CBF3 complex" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
UniPathway:UPA00143 EMBL:BN001307 GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 EMBL:AACD01000038 GO:GO:0006511
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 EMBL:U75874
RefSeq:XP_659906.1 HSSP:P34991 ProteinModelPortal:Q5BAX8 SMR:Q5BAX8
STRING:Q5BAX8 GeneID:2874613 KEGG:ani:AN2302.2 OMA:IMNILEV
OrthoDB:EOG4T1MX2 Uniprot:Q5BAX8
Length = 161
Score = 169 (64.5 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 48/152 (31%), Positives = 88/152 (57%)
Query: 13 MKSYIWVQTT-DGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLV 71
M + V T+ DG +V +VA +I + +++ +G I +P V+ + V
Sbjct: 1 MAEKMLVMTSNDGKNIEVPRDVAERSLLI-KNMLED-LGDPTE-PIPIPN-VSENVLSKV 56
Query: 72 LDYCRFHQ--VPGRSNKE---RKM-----FDEKFIRMDTKKLCELTSAADSLQLKPLVDL 121
L++C H+ P ++ + RK +D+KF+++D + L E+ AA+ L +KPL+D+
Sbjct: 57 LEWCAHHRNDPPSSADDDDSRRKTTDIEEWDQKFMQVDQEMLFEIILAANYLDIKPLLDI 116
Query: 122 TSRALARIIEGKTPEEIRETFHLPDDLTEEEK 153
+ +A +I+GK+PEEIR+TF++ +D T EE+
Sbjct: 117 GCKTVANMIKGKSPEEIRKTFNIQNDFTPEEE 148
>TAIR|locus:2080542 [details] [associations]
symbol:SK5 "AT3G60020" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
EMBL:AL138647 HSSP:P63208 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 EMBL:DQ056631 IPI:IPI00544108 PIR:T47826
RefSeq:NP_567091.1 UniGene:At.62418 ProteinModelPortal:Q9M1X4
SMR:Q9M1X4 IntAct:Q9M1X4 STRING:Q9M1X4 PRIDE:Q9M1X4
EnsemblPlants:AT3G60020.1 GeneID:825172 KEGG:ath:AT3G60020
TAIR:At3g60020 InParanoid:Q9M1X4 OMA:EWDADFM
ProtClustDB:CLSN2917466 Genevestigator:Q9M1X4 Uniprot:Q9M1X4
Length = 153
Score = 167 (63.8 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 45/146 (30%), Positives = 83/146 (56%)
Query: 13 MKSYIWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVL 72
M + I ++++DG +++E+VA I +++ G + I L + V I +V+
Sbjct: 1 MSTKIMLKSSDGKSFEIDEDVARKSIAI-NHMVEDGCATD---VIPL-RNVTSKILKIVI 55
Query: 73 DYCRFHQVPGRSNKERKMFDEKFIR-MDTKKLCELTSAADSLQLKPLVDLTSRAL----- 126
DYC H V + ++ K +D F++ ++T L ++ AA+ L ++ L+DLT + +
Sbjct: 56 DYCEKH-VKSKEEEDLKEWDADFMKTIETTILFDVMMAANYLNIQSLLDLTCKTVSDLLQ 114
Query: 127 ARIIEGKTPEEIRETFHLPDDLTEEE 152
A ++ GKTP+EIR F++ +DLT EE
Sbjct: 115 ADLLSGKTPDEIRAHFNIENDLTAEE 140
>WB|WBGene00004807 [details] [associations]
symbol:skr-1 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0002009 "morphogenesis of an epithelium"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0008406 "gonad development"
evidence=IMP] [GO:0016477 "cell migration" evidence=IMP]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 GO:GO:0008340 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0016477 GO:GO:0008406 GO:GO:0002119 GO:GO:0016246
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0040035
GO:GO:0006511 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 OMA:VIQWCTY
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:Z81072 EMBL:Z81084
PIR:T21573 RefSeq:NP_492513.1 ProteinModelPortal:G5ECU1 SMR:G5ECU1
IntAct:G5ECU1 EnsemblMetazoa:F46A9.5.1 EnsemblMetazoa:F46A9.5.2
EnsemblMetazoa:F46A9.5.3 GeneID:172775 KEGG:cel:CELE_F46A9.5
CTD:172775 WormBase:F46A9.5 NextBio:876957 Uniprot:G5ECU1
Length = 176
Score = 166 (63.5 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 48/161 (29%), Positives = 82/161 (50%)
Query: 17 IWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNY-AISLP-QRVNPAIFGLVLDY 74
I + ++D I V V I ++ G+ + A +P Q V +I V+ +
Sbjct: 16 IKISSSDNEIFLVPRNVIRLSNTINTLLMDLGLDDEEGTNAEPIPVQNVTASILKKVISW 75
Query: 75 CRFHQ-----VPGRSNKERKM-----FDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSR 124
C H N+E++ +D +F+++D L EL AA+ L +K L+D+T +
Sbjct: 76 CNHHHSDPISTEDSDNREKRTDDIGSWDVEFLKVDQGTLFELILAANYLDIKGLLDVTCK 135
Query: 125 ALARIIEGKTPEEIRETFHLPDDLT--EEEKLEPLNNVTDD 163
+A +I+GK+PEEIR TF++ +D T EEE++ N +D
Sbjct: 136 TVANMIKGKSPEEIRRTFNIKNDFTPEEEEQIRKENAWCED 176
>UNIPROTKB|G5ECU1 [details] [associations]
symbol:skr-1 "Protein SKR-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 GO:GO:0008340 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0016477 GO:GO:0008406 GO:GO:0002119 GO:GO:0016246
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0040035
GO:GO:0006511 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 OMA:VIQWCTY
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:Z81072 EMBL:Z81084
PIR:T21573 RefSeq:NP_492513.1 ProteinModelPortal:G5ECU1 SMR:G5ECU1
IntAct:G5ECU1 EnsemblMetazoa:F46A9.5.1 EnsemblMetazoa:F46A9.5.2
EnsemblMetazoa:F46A9.5.3 GeneID:172775 KEGG:cel:CELE_F46A9.5
CTD:172775 WormBase:F46A9.5 NextBio:876957 Uniprot:G5ECU1
Length = 176
Score = 166 (63.5 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 48/161 (29%), Positives = 82/161 (50%)
Query: 17 IWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNY-AISLP-QRVNPAIFGLVLDY 74
I + ++D I V V I ++ G+ + A +P Q V +I V+ +
Sbjct: 16 IKISSSDNEIFLVPRNVIRLSNTINTLLMDLGLDDEEGTNAEPIPVQNVTASILKKVISW 75
Query: 75 CRFHQ-----VPGRSNKERKM-----FDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSR 124
C H N+E++ +D +F+++D L EL AA+ L +K L+D+T +
Sbjct: 76 CNHHHSDPISTEDSDNREKRTDDIGSWDVEFLKVDQGTLFELILAANYLDIKGLLDVTCK 135
Query: 125 ALARIIEGKTPEEIRETFHLPDDLT--EEEKLEPLNNVTDD 163
+A +I+GK+PEEIR TF++ +D T EEE++ N +D
Sbjct: 136 TVANMIKGKSPEEIRRTFNIKNDFTPEEEEQIRKENAWCED 176
>WB|WBGene00004808 [details] [associations]
symbol:skr-2 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0007126 "meiosis" evidence=IMP]
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IMP] [GO:0000239 "pachytene" evidence=IMP] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IPI]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 GO:GO:0008340 GO:GO:0009792
GO:GO:0000132 GO:GO:0040007 GO:GO:0018991 GO:GO:0040010
GO:GO:0008285 GO:GO:0008406 GO:GO:0002119 GO:GO:0040011
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0040035
GO:GO:0006511 GO:GO:0019005 GO:GO:0045132 KO:K03094
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 OMA:IRRAFNI GO:GO:0000239
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:Z81084 EMBL:AF440506
PIR:T22268 RefSeq:NP_492512.1 UniGene:Cel.193 SMR:G5EDD8
IntAct:G5EDD8 EnsemblMetazoa:F46A9.4 GeneID:172773
KEGG:cel:CELE_F46A9.4 CTD:172773 WormBase:F46A9.4 NextBio:876949
Uniprot:G5EDD8
Length = 174
Score = 165 (63.1 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 43/147 (29%), Positives = 80/147 (54%)
Query: 17 IWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNY-AISLP-QRVNPAIFGLVLDY 74
I + ++D I V V + ++ G+ + A +P Q V +I V+++
Sbjct: 16 IKISSSDDEIFLVPRNVIRLSNTLNTLLVDLGLDDDEGTNAEPIPVQNVTASILKKVINW 75
Query: 75 CRFHQ---VPGRSNKER-----KMFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRAL 126
C HQ +P ++++ + +D+KF+ +D L EL AA+ L +K L+D+ +++
Sbjct: 76 CTKHQSDPIPTEDSEKKTDGSIQDWDKKFLDIDQGTLFELILAANYLDIKGLLDVACQSV 135
Query: 127 ARIIEGKTPEEIRETFHLPDDLTEEEK 153
A +I+GK+P+EIR F++ DD T EE+
Sbjct: 136 ANMIKGKSPDEIRRAFNIKDDFTAEER 162
>UNIPROTKB|G5EDD8 [details] [associations]
symbol:skr-2 "SKR-2" species:6239 "Caenorhabditis elegans"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 GO:GO:0008340 GO:GO:0009792 GO:GO:0000132
GO:GO:0040007 GO:GO:0018991 GO:GO:0040010 GO:GO:0008285
GO:GO:0008406 GO:GO:0002119 GO:GO:0040011 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0040035 GO:GO:0006511
GO:GO:0019005 GO:GO:0045132 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 OMA:IRRAFNI
GO:GO:0000239 GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:Z81084
EMBL:AF440506 PIR:T22268 RefSeq:NP_492512.1 UniGene:Cel.193
SMR:G5EDD8 IntAct:G5EDD8 EnsemblMetazoa:F46A9.4 GeneID:172773
KEGG:cel:CELE_F46A9.4 CTD:172773 WormBase:F46A9.4 NextBio:876949
Uniprot:G5EDD8
Length = 174
Score = 165 (63.1 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 43/147 (29%), Positives = 80/147 (54%)
Query: 17 IWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNY-AISLP-QRVNPAIFGLVLDY 74
I + ++D I V V + ++ G+ + A +P Q V +I V+++
Sbjct: 16 IKISSSDDEIFLVPRNVIRLSNTLNTLLVDLGLDDDEGTNAEPIPVQNVTASILKKVINW 75
Query: 75 CRFHQ---VPGRSNKER-----KMFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRAL 126
C HQ +P ++++ + +D+KF+ +D L EL AA+ L +K L+D+ +++
Sbjct: 76 CTKHQSDPIPTEDSEKKTDGSIQDWDKKFLDIDQGTLFELILAANYLDIKGLLDVACQSV 135
Query: 127 ARIIEGKTPEEIRETFHLPDDLTEEEK 153
A +I+GK+P+EIR F++ DD T EE+
Sbjct: 136 ANMIKGKSPDEIRRAFNIKDDFTAEER 162
>FB|FBgn0026175 [details] [associations]
symbol:skpC "skpC" species:7227 "Drosophila melanogaster"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
EMBL:AE014298 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0006511 eggNOG:COG5201 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
GeneTree:ENSGT00390000012652 HSSP:P34991 OrthoDB:EOG4K6DMM
EMBL:AF220068 EMBL:BT120007 RefSeq:NP_608358.1 UniGene:Dm.26675
SMR:Q9VWC4 IntAct:Q9VWC4 MINT:MINT-763311 STRING:Q9VWC4
EnsemblMetazoa:FBtr0074797 GeneID:32996 KEGG:dme:Dmel_CG11941
UCSC:CG11941-RA CTD:32996 FlyBase:FBgn0026175 InParanoid:Q9VWC4
OMA:HMIEESS GenomeRNAi:32996 NextBio:781428 Uniprot:Q9VWC4
Length = 158
Score = 164 (62.8 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 44/143 (30%), Positives = 74/143 (51%)
Query: 17 IWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCR 76
I ++++DG I E A I + + + + +N + LP +VN I +L +
Sbjct: 6 IKLESSDGMIFSTEVRAAKLSETIKTMLEVSAVENDENAIVPLP-KVNAFILSKILTWIY 64
Query: 77 FH-----------QVPGRSNKERKMFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRA 125
H ++ +S + +D FI +D L E+ AA+ L++K LVDL +
Sbjct: 65 HHKDDDAHGAEGVELSPQSPHDISAWDANFINVDQPTLFEIILAANYLEIKGLVDLCCKT 124
Query: 126 LARIIEGKTPEEIRETFHLPDDL 148
+A +I GKTPEEIR TF++PD++
Sbjct: 125 VANMIRGKTPEEIRHTFNIPDEI 147
>TAIR|locus:2093094 [details] [associations]
symbol:SK10 "AT3G21860" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051510
"regulation of unidimensional cell growth" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 EMBL:AB025634
GO:GO:0006511 GO:GO:0019005 EMBL:DQ056602 IPI:IPI00548110
RefSeq:NP_566695.1 UniGene:At.70381 HSSP:P63208
ProteinModelPortal:Q9LSX8 SMR:Q9LSX8 IntAct:Q9LSX8 STRING:Q9LSX8
EnsemblPlants:AT3G21860.1 GeneID:821740 KEGG:ath:AT3G21860
TAIR:At3g21860 eggNOG:COG5201 HOGENOM:HOG000172184
InParanoid:Q9LSX8 KO:K03094 OMA:IFDLIMA ProtClustDB:CLSN2688652
Genevestigator:Q9LSX8 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 Uniprot:Q9LSX8
Length = 152
Score = 162 (62.1 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 43/140 (30%), Positives = 75/140 (53%)
Query: 17 IWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCR 76
I ++++DG +VEEE A C C+ I + I LP+ V I +V++YC
Sbjct: 6 IILKSSDGHSFEVEEEAA--CQ--CQTIAHMSEDDCTDNGIPLPE-VTGKILEMVIEYCN 60
Query: 77 FHQVPGR---SNKERKMFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGK 133
H V S+++ K +D++F+ + +L AA+ L +K L+DL + +A +I+
Sbjct: 61 KHHVDAANPCSDEDLKKWDKEFMEKYQSTIFDLIMAANYLNIKSLLDLACQTVADMIKDN 120
Query: 134 TPEEIRETFHLPDDLTEEEK 153
T E R+ F++ +D T EE+
Sbjct: 121 TVEHTRKFFNIENDYTHEEE 140
>FB|FBgn0026176 [details] [associations]
symbol:skpB "skpB" species:7227 "Drosophila melanogaster"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
EMBL:AE013599 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0006511 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 GeneTree:ENSGT00390000012652
HSSP:P34991 EMBL:AF220067 EMBL:BT023253 RefSeq:NP_610729.1
UniGene:Dm.7613 SMR:Q7KJ69 DIP:DIP-18873N IntAct:Q7KJ69
STRING:Q7KJ69 EnsemblMetazoa:FBtr0088020 GeneID:36298
KEGG:dme:Dmel_CG8881 UCSC:CG8881-RA CTD:36298 FlyBase:FBgn0026176
InParanoid:Q7KJ69 OMA:MPIIRLE OrthoDB:EOG4ZCRMP GenomeRNAi:36298
NextBio:797800 Uniprot:Q7KJ69
Length = 161
Score = 161 (61.7 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 49/159 (30%), Positives = 83/159 (52%)
Query: 17 IWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCR 76
I +++ D I ++E+A C R I+ S N + LP VN I VL +
Sbjct: 4 IRLESADKEIFDTDQEIAK-CSETIRIAIEDLGDESDNSVLPLPN-VNSLILKKVLHWAT 61
Query: 77 FHQ----VPGR-SNKERKM-----FDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRAL 126
+H+ V NKE++ +D F+++D L EL AA+ L ++ L+D+T + +
Sbjct: 62 YHKDDPVVTEEVENKEKRTDDISSWDADFLKVDQGTLFELILAANYLNIQGLLDVTCKTV 121
Query: 127 ARIIEGKTPEEIRETFHLPDDLT--EEEKLEPLNNVTDD 163
A +I+GK+P+ IR+TF + +D EEE++ N +D
Sbjct: 122 ANMIKGKSPQAIRDTFAIQNDFLPQEEEQVRKENEWCED 160
>POMBASE|SPBC409.05 [details] [associations]
symbol:skp1 "SCF ubiquitin ligase complex subunit Skp1"
species:4896 "Schizosaccharomyces pombe" [GO:0000920 "cytokinetic
cell separation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006998 "nuclear envelope organization"
evidence=IMP] [GO:0007035 "vacuolar acidification" evidence=ISO]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IMP]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IGI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0042493
"response to drug" evidence=IGI] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IC] [GO:0043291 "RAVE complex" evidence=IPI]
[GO:0045841 "negative regulation of mitotic metaphase/anaphase
transition" evidence=IMP] [GO:0070072 "vacuolar proton-transporting
V-type ATPase complex assembly" evidence=TAS] [GO:2000060 "positive
regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 PomBase:SPBC409.05
GO:GO:0005829 GO:GO:0005634 GO:GO:0005773 GO:GO:0007095
GO:GO:0007067 GO:GO:0042493 EMBL:CU329671 GenomeReviews:CU329671_GR
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006998
GO:GO:0030163 GO:GO:0000920 GO:GO:0006511 GO:GO:0019005
GO:GO:0070072 HSSP:P63208 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GO:GO:2000060 GO:GO:0007035 GO:GO:0045841
EMBL:AB027472 GO:GO:0043291 OMA:VIQWCTY OrthoDB:EOG4T1MX2
EMBL:AB067633 EMBL:AF071066 PIR:T45459 RefSeq:NP_595455.1
ProteinModelPortal:Q9Y709 SMR:Q9Y709 IntAct:Q9Y709 STRING:Q9Y709
EnsemblFungi:SPBC409.05.1 GeneID:2540917 KEGG:spo:SPBC409.05
NextBio:20802032 Uniprot:Q9Y709
Length = 161
Score = 161 (61.7 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 41/124 (33%), Positives = 68/124 (54%)
Query: 54 NYAISLPQRVNPAIFGLVLDYCRFHQVPGRSNKERKM------------FDEKFIRMDTK 101
N I LP V+ + VL++C H+ S E + +D KF+ +D +
Sbjct: 38 NVPIPLPN-VSSNVLRKVLEWCEHHKNDLYSGTEEESDIRLKKSTDIDEWDRKFMAVDQE 96
Query: 102 KLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLT--EEEKLEPLNN 159
L E+ A++ L +KPL+D + +A +I GK+PE+IR+TF++P+D T EEE++ N
Sbjct: 97 MLFEIVLASNYLDIKPLLDTGCKTVANMIRGKSPEDIRKTFNIPNDFTPEEEEQIRKENE 156
Query: 160 VTDD 163
+D
Sbjct: 157 WAED 160
>DICTYBASE|DDB_G0284889 [details] [associations]
symbol:DDB_G0284889 species:44689 "Dictyostelium
discoideum" [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
Pfam:PF01466 dictyBase:DDB_G0284889 EMBL:AAFI02000073
Gene3D:3.30.710.10 InterPro:IPR011333 GO:GO:0006511 eggNOG:COG5201
PANTHER:PTHR11165 SUPFAM:SSF81382 RefSeq:XP_639912.1
ProteinModelPortal:Q54P05 EnsemblProtists:DDB0186240 GeneID:8624824
KEGG:ddi:DDB_G0284889 InParanoid:Q54P05 OMA:TEPRDEN Uniprot:Q54P05
Length = 404
Score = 135 (52.6 bits), Expect = 3.3e-10, Sum P(3) = 3.3e-10
Identities = 30/80 (37%), Positives = 44/80 (55%)
Query: 63 VNPAIFGLVLDYCRFHQVPGRSNKERKMFDEKFIRMDTKKLCELTSAADSLQLKPLVDLT 122
+ + +L++C+FH S FD FI+ LCEL SA+ L +K LV LT
Sbjct: 128 IRGCVLNSILEFCKFHST-NTSPILATQFDFNFIQKKPLNLCELASASYFLDIKSLVSLT 186
Query: 123 SRALARIIEGKTPEEIRETF 142
S+ +A I K+ EE+R+TF
Sbjct: 187 SKEIATQISQKSAEELRQTF 206
Score = 57 (25.1 bits), Expect = 3.3e-10, Sum P(3) = 3.3e-10
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 197 DERSVDDLLSFINGGNGDSKGIKTXXXXXXXXXXXDQLKDSSTNNLNGNHKEFNSLHSAF 256
+ +S+D++L FI G + K K+ K ++T N+N NH + N ++S
Sbjct: 251 ENKSLDEILEFI--GEDEKKSKKSKKS-----------KSNNTKNINSNHFDNNKINSKS 297
Query: 257 HN 258
N
Sbjct: 298 KN 299
Score = 55 (24.4 bits), Expect = 3.3e-10, Sum P(3) = 3.3e-10
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 300 PAMKEELDREVEDFARRLNS 319
P ++EE+DRE+ F RL S
Sbjct: 369 PVLQEEIDREIAIFKERLES 388
>WB|WBGene00004809 [details] [associations]
symbol:skr-3 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IMP]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 GO:GO:0006952
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 OMA:ENDFTHE EMBL:Z83109
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:AF440507 PIR:T22198
RefSeq:NP_507059.1 UniGene:Cel.192 ProteinModelPortal:G5EE67
SMR:G5EE67 EnsemblMetazoa:F44G3.6.1 EnsemblMetazoa:F44G3.6.2
GeneID:180081 KEGG:cel:CELE_F44G3.6 CTD:180081 WormBase:F44G3.6
NextBio:908014 Uniprot:G5EE67
Length = 167
Score = 149 (57.5 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 34/111 (30%), Positives = 66/111 (59%)
Query: 50 GSSKNYAISLPQRVNPAIFGLVLDYCRFH--QVPGRSNKERKM-----FDEKFIRMDTKK 102
GS+ I L Q+V I ++ +C H P + ++ +K +D +F+++D
Sbjct: 46 GSTSEDTIPL-QKVTSTILEKIITWCEHHADDEPKKVDENKKTVDISEWDAEFMKVDQGT 104
Query: 103 LCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEK 153
L E+ AA+ L ++ L+D+T++ +A +++GKTP +IR F++ +D +EEE+
Sbjct: 105 LFEIILAANYLDIRGLLDVTTQNVANMMKGKTPSQIRTLFNIENDFSEEER 155
>TAIR|locus:2080532 [details] [associations]
symbol:SK13 "AT3G60010" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051510
"regulation of unidimensional cell growth" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
EMBL:AL138647 HSSP:P63208 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 IPI:IPI00542124 PIR:T47825 RefSeq:NP_567090.1
UniGene:At.65295 ProteinModelPortal:Q9M1X5 SMR:Q9M1X5 IntAct:Q9M1X5
STRING:Q9M1X5 PaxDb:Q9M1X5 PRIDE:Q9M1X5 EnsemblPlants:AT3G60010.1
GeneID:825171 KEGG:ath:AT3G60010 TAIR:At3g60010 InParanoid:Q9M1X5
OMA:AVQSQTI PhylomeDB:Q9M1X5 ProtClustDB:CLSN2917465
Genevestigator:Q9M1X5 Uniprot:Q9M1X5
Length = 154
Score = 148 (57.2 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 46/149 (30%), Positives = 74/149 (49%)
Query: 13 MKSYIWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVL 72
M + + ++DG QVEE VA+ I I + + A V I V+
Sbjct: 1 MSKMVMLLSSDGESFQVEEAVAVQSQTIAHMIEDDCVANGVPIA-----NVTGVILSKVI 55
Query: 73 DYCRFHQV---PGRSNK-ERKMFDEKFIRM--DTKKLCELTSAADSLQLKPLVDLTSRAL 126
+YC+ H V P +K E K +D +F++ + L ++ AA+ L +K L+DL + +
Sbjct: 56 EYCKKHVVSDSPTEESKDELKKWDAEFMKALEQSSTLFDVMLAANYLNIKDLLDLGCQTV 115
Query: 127 ARIIEGKTPEEIRETFHLPDDLTEEEKLE 155
A +I GK P+EIR + +D T EE+ E
Sbjct: 116 ADMITGKKPDEIRALLGIENDFTPEEEEE 144
>FB|FBgn0034863 [details] [associations]
symbol:skpF "skpF" species:7227 "Drosophila melanogaster"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0000152 "nuclear ubiquitin ligase complex" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
EMBL:AE013599 GO:GO:0016567 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0006511 GO:GO:0004842 eggNOG:COG5201
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GeneTree:ENSGT00390000012652 HSSP:P34991
EMBL:AY118610 RefSeq:NP_611796.1 UniGene:Dm.18854 SMR:Q9W1Q0
IntAct:Q9W1Q0 MINT:MINT-783087 STRING:Q9W1Q0
EnsemblMetazoa:FBtr0072022 GeneID:37713 KEGG:dme:Dmel_CG12227
UCSC:CG12227-RA CTD:37713 FlyBase:FBgn0034863 InParanoid:Q9W1Q0
OMA:PVEAEND OrthoDB:EOG45QFWH GenomeRNAi:37713 NextBio:805037
Uniprot:Q9W1Q0
Length = 171
Score = 144 (55.7 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 44/148 (29%), Positives = 75/148 (50%)
Query: 17 IWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYA-ISLPQRVNPAIFGLVLDYC 75
I +Q++DG I + + E A C + +++ ++N I LP VN I VL +
Sbjct: 4 IKLQSSDGEIFETDIETAK-CSSTIKTLLEDCPVEAENDTLIPLPN-VNSTILKKVLIWA 61
Query: 76 RFHQVP-GRSNKERKM---------FDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRA 125
+ H+ N+E +D +F+ MD L EL AA+ L + L++
Sbjct: 62 KHHREDIAEENEEEAAKSVAVQITPWDAEFLSMDQGTLFELILAANYLDIPNLLNAACMT 121
Query: 126 LARIIEGKTPEEIRETFHLPDDLTEEEK 153
+A +I+G+T EEIR+TFH+ +D + E+
Sbjct: 122 VANMIKGRTTEEIRQTFHITNDFSPSEE 149
>FB|FBgn0031074 [details] [associations]
symbol:skpE "skpE" species:7227 "Drosophila melanogaster"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 GO:GO:0022008 EMBL:AE014298
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GeneTree:ENSGT00390000012652 HSSP:P34991
OrthoDB:EOG4K6DMM EMBL:AY752578 EMBL:AY752581 RefSeq:NP_608359.1
UniGene:Dm.17269 SMR:Q9VWC3 IntAct:Q9VWC3 STRING:Q9VWC3
EnsemblMetazoa:FBtr0074806 GeneID:32997 KEGG:dme:Dmel_CG11942
UCSC:CG11942-RA CTD:32997 FlyBase:FBgn0031074 InParanoid:Q9VWC3
OMA:QNDENAI GenomeRNAi:32997 NextBio:781433 Uniprot:Q9VWC3
Length = 167
Score = 143 (55.4 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 42/144 (29%), Positives = 73/144 (50%)
Query: 17 IWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCR 76
I +++++G I E VAM I + + + +N + L V+ G +L +
Sbjct: 6 IKLESSEGVIFPTEVRVAMVSETIKTMLDHFAVQNDENAIVPL-HSVSTFTLGKILAWAN 64
Query: 77 FHQ------VPGRSNKERKMF-----DEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRA 125
H+ G K R+ + D F+ +++ L E+ AA LQ+K L++LT
Sbjct: 65 HHKDDDDQSTEGEELKPRRPYAISPWDAIFLMVNSTTLLEIILAAKQLQIKGLLELTYNV 124
Query: 126 LARIIEGKTPEEIRETFHLPDDLT 149
+A +I GKTPEEIR F++P+D++
Sbjct: 125 VANMIRGKTPEEIRFIFNIPEDVS 148
>SGD|S000002736 [details] [associations]
symbol:SKP1 "Evolutionarily conserved kinetochore protein"
species:4932 "Saccharomyces cerevisiae" [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0000086 "G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0000921 "septin ring assembly" evidence=IMP] [GO:0000776
"kinetochore" evidence=IEA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006461 "protein complex assembly" evidence=IDA]
[GO:0003688 "DNA replication origin binding" evidence=IPI]
[GO:0045116 "protein neddylation" evidence=IGI;IMP] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0031518 "CBF3 complex" evidence=IGI;IDA;IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA;IPI]
[GO:0000777 "condensed chromosome kinetochore" evidence=IEA]
[GO:0043291 "RAVE complex" evidence=IPI] [GO:0051382 "kinetochore
assembly" evidence=IMP;IDA] [GO:0043254 "regulation of protein
complex assembly" evidence=IPI] [GO:0007035 "vacuolar
acidification" evidence=IGI;IMP] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0007096 "regulation of
exit from mitosis" evidence=IMP;IPI] [GO:0000910 "cytokinesis"
evidence=IMP] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
UniPathway:UPA00143 SGD:S000002736 GO:GO:0005634 GO:GO:0005773
GO:GO:0000086 GO:GO:0000776 GO:GO:0000082 EMBL:BK006938
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0003688
GO:GO:0000910 GO:GO:0019005 GO:GO:0007096 GO:GO:0000921
GO:GO:0042787 GO:GO:0051382 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 EMBL:U32517 GO:GO:0000777 GO:GO:0007035
GO:GO:0031518 GO:GO:0031146 PDB:1NEX PDB:3MKS PDB:3V7D PDBsum:1NEX
PDBsum:3MKS PDBsum:3V7D GO:GO:0045116 GO:GO:0043254
RefSeq:NP_010619.3 GeneID:851932 KEGG:sce:YDR332W
RefSeq:NP_010615.3 GeneID:851928 KEGG:sce:YDR328C GO:GO:0043291
GeneTree:ENSGT00390000012652 OrthoDB:EOG4T1MX2 EMBL:U43179
EMBL:U61764 EMBL:AY557730 PIR:S59793 ProteinModelPortal:P52286
SMR:P52286 DIP:DIP-1236N IntAct:P52286 MINT:MINT-384072
STRING:P52286 PaxDb:P52286 PeptideAtlas:P52286 PRIDE:P52286
EnsemblFungi:YDR328C OMA:PVEIANG EvolutionaryTrace:P52286
NextBio:969983 Genevestigator:P52286 GermOnline:YDR328C
Uniprot:P52286
Length = 194
Score = 143 (55.4 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 26/63 (41%), Positives = 45/63 (71%)
Query: 91 FDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTE 150
+D +F+++D + L E+ AA+ L +KPL+D + +A +I G++PEEIR TF++ +D T
Sbjct: 119 WDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVNDFTP 178
Query: 151 EEK 153
EE+
Sbjct: 179 EEE 181
>TAIR|locus:2061709 [details] [associations]
symbol:MEO "AT2G20160" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 HSSP:P63208
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 EMBL:AC006081
IPI:IPI00536504 PIR:G84585 RefSeq:NP_565467.1 UniGene:At.66224
ProteinModelPortal:Q9SL65 SMR:Q9SL65 IntAct:Q9SL65 STRING:Q9SL65
EnsemblPlants:AT2G20160.1 GeneID:816536 KEGG:ath:AT2G20160
TAIR:At2g20160 InParanoid:Q9SL65 OMA:LAIIIEY PhylomeDB:Q9SL65
Genevestigator:Q9SL65 Uniprot:Q9SL65
Length = 150
Score = 138 (53.6 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 42/140 (30%), Positives = 71/140 (50%)
Query: 17 IWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCR 76
I + ++D +++E VA M+ I + AI L Q V I ++++YC+
Sbjct: 6 IVLTSSDDECFEIDEAVARKMQMVAHMIDD----DCADKAIRL-QNVTGKILAIIIEYCK 60
Query: 77 FHQVPGRSNKERKMFDEKFIR-MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTP 135
H + E +D +F++ +D L +L AAD L + L +L ++A+A KT
Sbjct: 61 KHVDDVEAKNEFVTWDAEFVKNIDMDTLFKLLDAADYLIVIGLKNLIAQAIADYTADKTV 120
Query: 136 EEIRETFHLPDDLTEEEKLE 155
EIRE F++ +D T EE+ E
Sbjct: 121 NEIRELFNIENDYTPEEEEE 140
>TAIR|locus:2056966 [details] [associations]
symbol:SK19 "AT2G03160" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 HSSP:P63208
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 EMBL:AC005313
EMBL:DQ056525 IPI:IPI00531321 PIR:T02710 RefSeq:NP_565295.1
UniGene:At.52614 ProteinModelPortal:O81058 SMR:O81058 IntAct:O81058
STRING:O81058 PaxDb:O81058 PRIDE:O81058 EnsemblPlants:AT2G03160.1
GeneID:814845 KEGG:ath:AT2G03160 TAIR:At2g03160 InParanoid:O81058
OMA:VVETHES PhylomeDB:O81058 ProtClustDB:CLSN2917045
Genevestigator:O81058 Uniprot:O81058
Length = 200
Score = 126 (49.4 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 29/78 (37%), Positives = 50/78 (64%)
Query: 85 NKERKM--FDEKFIR-MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRET 141
+K+ K+ +D KF++ D K + ++ AA+ L ++ L DL S+ +A I+ TPEE+RE
Sbjct: 107 DKKEKLNEWDAKFMKDFDIKTIFDIILAANYLNVQGLFDLCSKTIADYIKDMTPEEVREL 166
Query: 142 FHLPDDLTEEEKLEPLNN 159
F++ +D T EE+ E + N
Sbjct: 167 FNIENDFTPEEE-EAIRN 183
Score = 56 (24.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 17 IWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCR 76
I + ++DG +VEE VA ++ II+ ++K I +P V I V++YC+
Sbjct: 6 IVLTSSDGESFKVEEVVARKLQIV-GHIIEDDCATNK---IPIPN-VTGEILAKVIEYCK 60
Query: 77 FH 78
H
Sbjct: 61 KH 62
>WB|WBGene00004811 [details] [associations]
symbol:skr-5 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 GeneTree:ENSGT00390000012652
HSSP:P34991 EMBL:Z92786 PIR:T22373 RefSeq:NP_507393.1
ProteinModelPortal:Q9XU27 SMR:Q9XU27 STRING:Q9XU27
EnsemblMetazoa:F47H4.10 GeneID:180148 KEGG:cel:CELE_F47H4.10
UCSC:F47H4.10 CTD:180148 WormBase:F47H4.10 InParanoid:Q9XU27
NextBio:908236 ArrayExpress:Q9XU27 Uniprot:Q9XU27
Length = 145
Score = 134 (52.2 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 34/100 (34%), Positives = 56/100 (56%)
Query: 61 QRVNPAIFGLVLDYCRFH--QVPGR-SNKERKMFDE------KFIRMDTKKLCELTSAAD 111
+ V IF V+++C +H +P N E K D+ +F+++D L EL AA
Sbjct: 46 KNVTSEIFKKVIEWCEYHAEDIPKPPDNVEEKRTDDIGEWDVEFLKVDKGTLFELVLAAT 105
Query: 112 SLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEE 151
L +K L ++T +++A I+GK+PEEIR F+L ++ E
Sbjct: 106 YLDIKGLFNVTCKSIANSIKGKSPEEIRAVFNLGNETNME 145
>CGD|CAL0001786 [details] [associations]
symbol:SKP1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0043291 "RAVE complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0031518 "CBF3 complex"
evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0045116 "protein neddylation" evidence=IEA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IEA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0007035 "vacuolar acidification"
evidence=IEA] [GO:0000920 "cytokinetic cell separation"
evidence=IEA] [GO:0045841 "negative regulation of mitotic
metaphase/anaphase transition" evidence=IEA] [GO:0000921 "septin
ring assembly" evidence=IEA] [GO:0006998 "nuclear envelope
organization" evidence=IEA] [GO:0051382 "kinetochore assembly"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0043254 "regulation of protein complex assembly" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0007096 "regulation of exit from mitosis" evidence=IEA]
[GO:0003688 "DNA replication origin binding" evidence=IEA]
[GO:0019237 "centromeric DNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 CGD:CAL0001786
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
EMBL:AACQ01000115 EMBL:AACQ01000111 RefSeq:XP_713872.1
RefSeq:XP_714072.1 ProteinModelPortal:Q59WE2 SMR:Q59WE2
STRING:Q59WE2 GeneID:3644272 GeneID:3644485 KEGG:cal:CaO19.11905
KEGG:cal:CaO19.4427 Uniprot:Q59WE2
Length = 164
Score = 133 (51.9 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 32/113 (28%), Positives = 63/113 (55%)
Query: 50 GSSKNYAISLPQRVNPAIFGLVLDYCRFHQ---VPGRSNKERKM------FDEKFIRMDT 100
G +++ I P V + VL++C H+ +++ K +D F+++D
Sbjct: 40 GLEEDFEIPTPN-VRANVLCKVLEWCEHHKNTVFQDDEDEDAKKSVPVEEWDRNFLKVDQ 98
Query: 101 KKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEK 153
+ L E+ AA+ L +KPL++ + +A +I+ K+PEE+R TF++ +D + EE+
Sbjct: 99 EMLYEIILAANYLNIKPLLESGCKMVAEMIKSKSPEELRRTFNIINDFSPEEE 151
>TAIR|locus:2102370 [details] [associations]
symbol:SK15 "AT3G25650" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
GO:GO:0019005 EMBL:AP001313 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 EMBL:DQ446700 IPI:IPI00519031 IPI:IPI00759250
RefSeq:NP_566773.1 UniGene:At.66493 ProteinModelPortal:Q1PEL7
SMR:Q1PEL7 IntAct:Q1PEL7 STRING:Q1PEL7 EnsemblPlants:AT3G25650.1
GeneID:822152 KEGG:ath:AT3G25650 TAIR:At3g25650 OMA:ENDFTHE
PhylomeDB:Q1PEL7 Genevestigator:Q1PEL7 Uniprot:Q1PEL7
Length = 177
Score = 118 (46.6 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 25/68 (36%), Positives = 46/68 (67%)
Query: 91 FDEKFIR-MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLT 149
+D +F++ +D + + +L AA+ L ++ L+ LT + +A I+ KTPEE+RE F++ +D T
Sbjct: 91 WDAEFMKNIDMETIFKLILAANYLNVEGLLGLTCQTVADYIKDKTPEEVRELFNIENDFT 150
Query: 150 EEEKLEPL 157
EE+ E +
Sbjct: 151 HEEEEEAI 158
Score = 55 (24.4 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 17 IWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCR 76
I + ++DG QVEE VA ++ + +++ ++ I L Q V I +VL+YC+
Sbjct: 6 IVLTSSDGESFQVEEVVARKLQIV-KHLLEDDCVINE---IPL-QNVTGNILSIVLEYCK 60
Query: 77 FH 78
H
Sbjct: 61 KH 62
>WB|WBGene00004821 [details] [associations]
symbol:skr-15 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
GO:GO:0040010 GO:GO:0006974 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0006511 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:AF440516
EMBL:FO080579 PIR:T33615 RefSeq:NP_494662.1 UniGene:Cel.185
ProteinModelPortal:G5EE88 SMR:G5EE88 EnsemblMetazoa:F54D10.1
GeneID:173729 KEGG:cel:CELE_F54D10.1 CTD:173729 WormBase:F54D10.1
OMA:YSIESND NextBio:880833 Uniprot:G5EE88
Length = 184
Score = 133 (51.9 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 38/149 (25%), Positives = 75/149 (50%)
Query: 16 YIWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYAISLP---QRVNPAIFGLVL 72
Y +++ D + ++ E+ + I G S++N +P ++VN LV+
Sbjct: 20 YYSIESNDRVVLKISEQAIKQSATLSNSITNLGY-SAENAESMVPIPIEKVNGKTLKLVV 78
Query: 73 DYCRFHQ---VPGR---SNKERKMFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRAL 126
++C H+ VP N ++D KF+ ++ L +L +A++ L++ L+ + +
Sbjct: 79 EWCEHHKADPVPEAYPSGNTVLPVWDRKFVDIEHDALTDLVNASNFLEVMTLLTYCCKFI 138
Query: 127 ARIIEGKTPEEIRETFHLPDDLTEEEKLE 155
A + +G +PEE+R F +P D E+EK E
Sbjct: 139 AGLAKGMSPEEMRVFFCIPTD-EEDEKAE 166
>WB|WBGene00004810 [details] [associations]
symbol:skr-4 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 OMA:EWDADFM
EMBL:AL117207 GeneTree:ENSGT00390000012652 HSSP:P34991
RefSeq:NP_507857.1 ProteinModelPortal:Q9U1Y9 SMR:Q9U1Y9
STRING:Q9U1Y9 PaxDb:Q9U1Y9 EnsemblMetazoa:Y60A3A.18 GeneID:191762
KEGG:cel:CELE_Y60A3A.18 UCSC:Y60A3A.18 CTD:191762
WormBase:Y60A3A.18 InParanoid:Q9U1Y9 NextBio:950246 Uniprot:Q9U1Y9
Length = 159
Score = 126 (49.4 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 39/132 (29%), Positives = 73/132 (55%)
Query: 40 ICREII---QTGMGSSKNYAISLPQRVNPAIFGLVLDYCRFH--QVPGR------SNK-- 86
+ R++I +T G + I LP +V AI ++ +C H P + NK
Sbjct: 22 VSRKVISQSKTISGFTSEDTIPLP-KVTSAILEKIITWCEHHADDEPKKVEKIEKGNKKT 80
Query: 87 -ERKMFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLP 145
E +D +F+++D L E+ AA+ L ++ L+++T++ +A +++GKTP ++R F +
Sbjct: 81 VEISEWDAEFMKVDQGTLFEIILAANYLDIRGLLEVTTQNVANMMKGKTPSQVRTLFKI- 139
Query: 146 DDLTEEEKLEPL 157
D+ +EEE LE +
Sbjct: 140 DNFSEEE-LEAM 150
>WB|WBGene00004812 [details] [associations]
symbol:skr-6 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 Gene3D:3.30.710.10
InterPro:IPR011333 GO:GO:0006511 eggNOG:COG5201
HOGENOM:HOG000172184 KO:K03094 PANTHER:PTHR11165 SUPFAM:SSF81382
GeneTree:ENSGT00390000012652 EMBL:AL023837 RefSeq:NP_507574.2
UniGene:Cel.36626 ProteinModelPortal:Q9U2N1 SMR:Q9U2N1
STRING:Q9U2N1 EnsemblMetazoa:Y37H2C.2 GeneID:191763
KEGG:cel:CELE_Y37H2C.2 UCSC:Y37H2C.2 CTD:191763 WormBase:Y37H2C.2
InParanoid:Q9U2N1 OMA:DHIMAAN NextBio:950250 Uniprot:Q9U2N1
Length = 106
Score = 121 (47.7 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 30/89 (33%), Positives = 52/89 (58%)
Query: 56 AISLPQRVNPAIFGLVLDYCRFHQVPGRS--NKERKMFDEKFIRMDTKKLCELTSAADSL 113
AI L +V+ IF +++YC HQ R N E +D +F+++D L +L AA+ L
Sbjct: 3 AIPLT-KVDAKIFEKIIEYCE-HQGTPRPLLNGEIGEWDSEFLKLDQNTLFDLVLAANYL 60
Query: 114 QLKPLVDLTSRALARIIEGKTPEEIRETF 142
++ L D+T++ +A +++ TP +IR F
Sbjct: 61 NIENLFDVTTQFIANMMKNNTPSQIRARF 89
>TAIR|locus:2093074 [details] [associations]
symbol:SK7 "AT3G21840" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 EMBL:AB025634
GO:GO:0006511 GO:GO:0019005 HSSP:P63208 eggNOG:COG5201
HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 EMBL:BX841469 IPI:IPI00538513
RefSeq:NP_566693.1 UniGene:At.70383 ProteinModelPortal:Q9LSY0
SMR:Q9LSY0 IntAct:Q9LSY0 STRING:Q9LSY0 EnsemblPlants:AT3G21840.1
GeneID:821738 KEGG:ath:AT3G21840 TAIR:At3g21840 InParanoid:Q9LSY0
OMA:LMIIACK Genevestigator:Q9LSY0 Uniprot:Q9LSY0
Length = 125
Score = 108 (43.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 31/117 (26%), Positives = 58/117 (49%)
Query: 17 IWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCR 76
I ++++DG + ++EEE A C I I + I + V I +V++YC
Sbjct: 6 IMLKSSDGKMFEIEEETARQCQTIAHMI----EAECTDNVIPV-SNVTSEILEMVIEYCN 60
Query: 77 FHQVPGR---SNKERKMFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARII 130
H V S+++ K +D++F+ D + L +AA L +K L+ L + +A ++
Sbjct: 61 KHHVDAANPCSDEDLKKWDKEFMEKDQYTIFHLMNAAYDLHIKSLLALAYQTVADMV 117
>WB|WBGene00004826 [details] [associations]
symbol:skr-20 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GeneTree:ENSGT00390000012652 HSSP:P34991
EMBL:Z50755 EMBL:AF440519 PIR:T24207 RefSeq:NP_510192.1
UniGene:Cel.183 SMR:G5EE98 IntAct:G5EE98 EnsemblMetazoa:R12H7.5
GeneID:181445 KEGG:cel:CELE_R12H7.5 CTD:181445 WormBase:R12H7.5
OMA:FINQKFI NextBio:913974 Uniprot:G5EE98
Length = 173
Score = 116 (45.9 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 41/150 (27%), Positives = 78/150 (52%)
Query: 19 VQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYAISLPQRV--NPAIFGLVLDYCR 76
+++ DG I VE FC I ++ I G+ + +N + P V + +I V+++
Sbjct: 12 LKSEDGQIFNVERGPMKFCAFINQKFIDHGV-NDRNCERADPILVPFHSSIVQAVIEWLY 70
Query: 77 FHQ---VPGRSNKER----KMFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARI 129
+Q + R +K R +D++F +++ L L +A+ +L ++ L+++ A A +
Sbjct: 71 HYQDNPLARRDSKIRYHDFSEWDKQFFNVESGVLFALLNASHALGVEDLMNMGCAAAAEL 130
Query: 130 IEGKTPEEIRETFHLPDDLTEEEKLEPLNN 159
I GK+ EEIR+ + + D EE+ E L N
Sbjct: 131 IRGKSTEEIRKIYGIRSD--EEQMEEALAN 158
>UNIPROTKB|G5EE98 [details] [associations]
symbol:skr-20 "Protein SKR-20" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 KO:K03094
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GeneTree:ENSGT00390000012652 HSSP:P34991
EMBL:Z50755 EMBL:AF440519 PIR:T24207 RefSeq:NP_510192.1
UniGene:Cel.183 SMR:G5EE98 IntAct:G5EE98 EnsemblMetazoa:R12H7.5
GeneID:181445 KEGG:cel:CELE_R12H7.5 CTD:181445 WormBase:R12H7.5
OMA:FINQKFI NextBio:913974 Uniprot:G5EE98
Length = 173
Score = 116 (45.9 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 41/150 (27%), Positives = 78/150 (52%)
Query: 19 VQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYAISLPQRV--NPAIFGLVLDYCR 76
+++ DG I VE FC I ++ I G+ + +N + P V + +I V+++
Sbjct: 12 LKSEDGQIFNVERGPMKFCAFINQKFIDHGV-NDRNCERADPILVPFHSSIVQAVIEWLY 70
Query: 77 FHQ---VPGRSNKER----KMFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARI 129
+Q + R +K R +D++F +++ L L +A+ +L ++ L+++ A A +
Sbjct: 71 HYQDNPLARRDSKIRYHDFSEWDKQFFNVESGVLFALLNASHALGVEDLMNMGCAAAAEL 130
Query: 130 IEGKTPEEIRETFHLPDDLTEEEKLEPLNN 159
I GK+ EEIR+ + + D EE+ E L N
Sbjct: 131 IRGKSTEEIRKIYGIRSD--EEQMEEALAN 158
>TAIR|locus:2056931 [details] [associations]
symbol:SK16 "AT2G03190" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 GO:GO:0019005
HSSP:P63208 eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 EMBL:AC005313 EMBL:BT015070 EMBL:BT015726
IPI:IPI00519862 PIR:T02707 RefSeq:NP_565297.1 UniGene:At.50066
ProteinModelPortal:O81055 SMR:O81055 IntAct:O81055 STRING:O81055
PaxDb:O81055 PRIDE:O81055 EnsemblPlants:AT2G03190.1 GeneID:814848
KEGG:ath:AT2G03190 TAIR:At2g03190 InParanoid:O81055 OMA:CADKAIP
PhylomeDB:O81055 ProtClustDB:CLSN2917046 Genevestigator:O81055
Uniprot:O81055
Length = 170
Score = 99 (39.9 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 21/71 (29%), Positives = 44/71 (61%)
Query: 84 SNKERKMFDEKFIR-MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETF 142
+ E + +D +F++ D + + +L A + L ++ L+ LT + +A ++ +PEE+RE F
Sbjct: 85 AKNELRTWDAEFMKEFDMETVMKLILAVNYLNVQDLLGLTCQTVADHMKDMSPEEVRELF 144
Query: 143 HLPDDLTEEEK 153
++ +D T EE+
Sbjct: 145 NIENDYTPEEE 155
Score = 49 (22.3 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 17 IWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYAISLPQRVNPAIFGLVLDYCR 76
I + ++D +VEE VA +I I + AI L + V I LV++YC+
Sbjct: 6 IVLTSSDDESFEVEEAVARKLKVIAHMIDD----DCADKAIPL-ENVTGNILALVIEYCK 60
Query: 77 FH 78
H
Sbjct: 61 KH 62
>WB|WBGene00004822 [details] [associations]
symbol:skr-16 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
eggNOG:COG5201 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 GeneTree:ENSGT00390000012652
EMBL:FO080771 PIR:T34158 RefSeq:NP_501128.2
ProteinModelPortal:Q18567 SMR:Q18567 STRING:Q18567 PaxDb:Q18567
EnsemblMetazoa:C42D4.6 GeneID:191765 KEGG:cel:CELE_C42D4.6
UCSC:C42D4.6 CTD:191765 WormBase:C42D4.6 HOGENOM:HOG000018058
InParanoid:Q18567 OMA:NMAKGKN NextBio:950258 Uniprot:Q18567
Length = 181
Score = 112 (44.5 bits), Expect = 0.00014, P = 0.00014
Identities = 27/102 (26%), Positives = 58/102 (56%)
Query: 61 QRVNPAIFGLVLDYCRFHQVPGR------SNKERKMFDEKFIR-MDTKKLCELTSAADSL 113
++V VL++C H+ G+ + +D ++++ +D ++L +L +A++ L
Sbjct: 72 EKVQGDTLNRVLEWCNNHRDDGKYVSQCGPSLRLPQWDFRWLKDLDNQELVDLINASNDL 131
Query: 114 QLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLE 155
Q++ L+D + +A + +GK P ++RE F + LT+EE+ E
Sbjct: 132 QMQQLMDYACKTVANMAKGKNPAQLRELFGI---LTDEEEAE 170
>WB|WBGene00004813 [details] [associations]
symbol:skr-7 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0010171 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0006511 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:FO081134
EMBL:AF440509 RefSeq:NP_504221.1 UniGene:Cel.190
ProteinModelPortal:G5EDY3 SMR:G5EDY3 IntAct:G5EDY3
EnsemblMetazoa:Y47D7A.1 GeneID:178840 KEGG:cel:CELE_Y47D7A.1
CTD:178840 WormBase:Y47D7A.1 OMA:QANEAPI NextBio:902772
Uniprot:G5EDY3
Length = 194
Score = 109 (43.4 bits), Expect = 0.00048, P = 0.00048
Identities = 34/146 (23%), Positives = 70/146 (47%)
Query: 19 VQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYAISLP-QRVNPAIFGLVLDYCRF 77
V+++DG + ++ +E + +I T + + +P V I +V+++C
Sbjct: 25 VESSDGQVYEISDEAVKQSNTLSN-LISTCVANDVASMDPIPITNVTGNIMKMVIEWCEK 83
Query: 78 HQ---VPGRSNKERKM-----FDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARI 129
H+ +P + K +D F+++D L +L A++ L + L+ + +A +
Sbjct: 84 HKGETLPVEDDSVPKNITVPEWDTNFLKIDNDVLFDLIVASNFLDVPGLMSYACKMVANM 143
Query: 130 IEGKTPEEIRETFHLPDDLTEEEKLE 155
GK+P+E+R F +P D E+E E
Sbjct: 144 AIGKSPDEMRVLFAIPTD-EEDEAAE 168
>WB|WBGene00004814 [details] [associations]
symbol:skr-8 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0010171
"body morphogenesis" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0000003 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0006511 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:CU457737
EMBL:AF440510 RefSeq:NP_503044.1 UniGene:Cel.189
ProteinModelPortal:G5ECY4 SMR:G5ECY4 EnsemblMetazoa:C52D10.9
GeneID:178495 KEGG:cel:CELE_C52D10.9 CTD:178495 WormBase:C52D10.9
OMA:NINVPEW NextBio:901360 Uniprot:G5ECY4
Length = 194
Score = 107 (42.7 bits), Expect = 0.00083, P = 0.00083
Identities = 40/157 (25%), Positives = 74/157 (47%)
Query: 8 VVKPEMKSYIWVQTTDGSIQQVEEEVAMFCPMICREIIQTGMGSSKNYAISLP-QRVNPA 66
VV P M V++ DG + ++ +E A+ I +I T +P V
Sbjct: 17 VVAPIMYK---VESNDGKVFEISDE-AVKQSNILSNLISTCAPEDVASMDPIPITNVTGN 72
Query: 67 IFGLVLDYCRFHQ---VPGRSNKERKM-----FDEKFIRMDTKKLCELTSAADSLQLKPL 118
I +V+++C H+ +P + K +D F+++D + L +L A + L + L
Sbjct: 73 ILKMVIEWCEKHKGEALPVEDDSVPKNINVPEWDTNFLKIDNEVLFDLIVACNYLDVPGL 132
Query: 119 VDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLE 155
++ + +A + GK+P+E+R F +P D E+E E
Sbjct: 133 MNYGCKMVANMAIGKSPDELRIIFAIPTD-EEDEAAE 168
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.132 0.382 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 357 316 0.00082 116 3 11 22 0.42 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 63
No. of states in DFA: 610 (65 KB)
Total size of DFA: 214 KB (2119 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.78u 0.09s 26.87t Elapsed: 00:00:01
Total cpu time: 26.79u 0.09s 26.88t Elapsed: 00:00:01
Start: Sat May 11 08:39:46 2013 End: Sat May 11 08:39:47 2013