BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018343
(357 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8S9H7|DIV_ANTMA Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA
PE=2 SV=1
Length = 307
Score = 126 bits (316), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 80/111 (72%), Gaps = 3/111 (2%)
Query: 84 HLTDGYLSDDPAHGSGSSNRR---CERKKGVPWTEEEHRLFLIGLQKLGKGDWRGIARNY 140
H DG+ G SS+ R ERKKGVPWTEEEH+LFL+GL+K GKGDWR I+RN+
Sbjct: 102 HGFDGFKQSYGTGGRKSSSGRPSEQERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNF 161
Query: 141 VMSRTPTQVASHAQKYFIRQSNATRRKRRSSLFDMVADDMATDTPPVPEEQ 191
V++RTPTQVASHAQKYFIRQ + + KRR+S+ D+ +++ + P P+ +
Sbjct: 162 VITRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVNLSDNQTPSPDNK 212
>sp|Q2V9B0|MY1R1_SOLTU Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1
Length = 297
Score = 121 bits (304), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 86/176 (48%), Positives = 118/176 (67%), Gaps = 16/176 (9%)
Query: 18 CPTRGGGSSPGVGG-LKLFGVRLTDGSIIKKSASMGNLSALHYHSSSSAAASPNPDSPLS 76
P GG G GG + LFGVR+ + +KS S+ +LS + H +++ + ++ S
Sbjct: 12 TPAVTGG---GFGGEIMLFGVRVKVDPM-RKSVSLNDLSQ-YEHPNANNNNNGGDNNESS 66
Query: 77 DHVRDPNHLTDGYLSDDPAHGSGSSNRRCERKKGVPWTEEEHRLFLIGLQKLGKGDWRGI 136
+D +GY S D A S++ R ERK+GVPWTEEEH+LFL+GLQK+GKGDWRGI
Sbjct: 67 KVAQD-----EGYASADDAVQHQSNSGR-ERKRGVPWTEEEHKLFLLGLQKVGKGDWRGI 120
Query: 137 ARNYVMSRTPTQVASHAQKYFIRQSNATRRKRRSSLFDMVADDMATDTPPVPEEQV 192
+RN+V +RTPTQVASHAQKYF+R+SN RR+RRSSLFD+ D ++ +P E+V
Sbjct: 121 SRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDSVSV----MPIEEV 172
>sp|Q869R9|MYBJ_DICDI Myb-like protein J OS=Dictyostelium discoideum GN=mybJ PE=3 SV=1
Length = 734
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 54/81 (66%), Gaps = 5/81 (6%)
Query: 103 RRCERKKGVPWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIRQSN 162
++ K+G WT+EEH FL G+Q GKG W+ IA+ +V +RTPTQ+ SHAQKY++RQ
Sbjct: 371 KKTSLKQG--WTKEEHIRFLNGIQIHGKGAWKEIAQ-FVGTRTPTQIQSHAQKYYLRQKQ 427
Query: 163 ATRRKRRSSLFDMVADDMATD 183
T+ KR S+ D+ D+ D
Sbjct: 428 ETKNKR--SIHDLSLQDLIDD 446
>sp|Q54HX6|MYBI_DICDI Myb-like protein I OS=Dictyostelium discoideum GN=mybI PE=3 SV=1
Length = 977
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 106 ERKKGVPWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIRQSNATR 165
++K+ WT EEH F+ L K G D + I++ YV +R PTQV +HAQKYF+R
Sbjct: 168 KKKQSRYWTPEEHSRFIEALSKYGHKDVKSISQ-YVSTRNPTQVRTHAQKYFLRIDRERG 226
Query: 166 RKRRS 170
RK S
Sbjct: 227 RKLES 231
>sp|Q54Z40|MYBH_DICDI Myb-like protein H OS=Dictyostelium discoideum GN=mybH PE=3 SV=1
Length = 1217
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 110 GVPWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYF--IRQSNA 163
PW+ EEH LFL ++K G+G+W+ I+ + SR Q+ +HA+ YF I Q N
Sbjct: 229 NTPWSNEEHELFLKAIEKYGRGNWKLIS-TLIKSRNTLQIKNHARIYFDKISQQNG 283
Score = 37.0 bits (84), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 113 WTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIR 159
WT+EE RLF + KL D + I + +V ++T QV SHAQK+ ++
Sbjct: 153 WTKEEERLF-VEAYKLYDKDNKKI-QEHVKTKTILQVRSHAQKFALK 197
>sp|Q6R0H0|ASG4_ARATH Transcription factor ASG4 OS=Arabidopsis thaliana GN=ASG4 PE=2 SV=1
Length = 287
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Query: 113 WTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIR-QSNATR 165
WTE+EH FL L L DW+ I + +V S+T Q+ SHAQKYF++ Q N T+
Sbjct: 64 WTEQEHDKFLEALH-LFDRDWKKI-KAFVGSKTVIQIRSHAQKYFLKVQKNGTK 115
>sp|Q54IF9|MYBG_DICDI Myb-like protein G OS=Dictyostelium discoideum GN=mybG PE=3 SV=1
Length = 423
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 40/66 (60%), Gaps = 10/66 (15%)
Query: 113 WTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIR-QSNAT------- 164
WT+EEH+ FL L + DW+ I ++V S+T Q+ SHAQKYFI+ Q N T
Sbjct: 44 WTDEEHQKFLEALTLFDR-DWKKI-ESFVGSKTVIQIRSHAQKYFIKVQKNNTGERIPPP 101
Query: 165 RRKRRS 170
R KR+S
Sbjct: 102 RPKRKS 107
>sp|P92973|CCA1_ARATH Protein CCA1 OS=Arabidopsis thaliana GN=CCA1 PE=1 SV=1
Length = 608
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 113 WTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIR 159
WTEEEH F+ L+ G+ W+ I +V ++T Q+ SHAQK+F +
Sbjct: 27 WTEEEHNRFIEALRLYGRA-WQKI-EEHVATKTAVQIRSHAQKFFSK 71
>sp|Q86HX9|MYBK_DICDI Myb-like protein K OS=Dictyostelium discoideum GN=mybK PE=3 SV=1
Length = 894
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 113 WTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIRQSNA 163
WT EEH FL +Q+ G D+ IA+ +V +R QV +H Y Q A
Sbjct: 657 WTSEEHNKFLEAVQQFGIKDYHAIAK-FVQTRNHHQVRTHVNTYLKNQKKA 706
>sp|Q6R0H1|LHY_ARATH Protein LHY OS=Arabidopsis thaliana GN=LHY PE=1 SV=2
Length = 645
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 113 WTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIR 159
WTE+EH FL L+ G+ W+ I ++ ++T Q+ SHAQK+F +
Sbjct: 27 WTEDEHERFLEALRLYGRA-WQRIEE-HIGTKTAVQIRSHAQKFFTK 71
>sp|Q69Z66|MYSM1_MOUSE Histone H2A deubiquitinase MYSM1 OS=Mus musculus GN=Mysm1 PE=2 SV=2
Length = 819
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 111 VPWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYF 157
V WT EE LF GL K G+ W IA + SRT QV S+A++YF
Sbjct: 116 VKWTVEEKELFEQGLAKFGRR-WTKIA-TLLKSRTVLQVKSYARQYF 160
>sp|Q5VVJ2|MYSM1_HUMAN Histone H2A deubiquitinase MYSM1 OS=Homo sapiens GN=MYSM1 PE=1 SV=1
Length = 828
Score = 40.8 bits (94), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 111 VPWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYF 157
V WT EE LF GL K G+ W I++ + SRT QV S+A++YF
Sbjct: 119 VKWTIEEKELFEQGLAKFGRR-WTKISK-LIGSRTVLQVKSYARQYF 163
>sp|Q6NRB5|TAD2B_XENLA Transcriptional adapter 2-beta OS=Xenopus laevis GN=tada2b PE=2
SV=1
Length = 420
Score = 40.8 bits (94), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 113 WTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFI 158
WT E +L L +++ G G+W +A + SRTPT+V H +I
Sbjct: 70 WTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPTEVMEHYVTMYI 115
>sp|Q5F3F2|MYSM1_CHICK Histone H2A deubiquitinase MYSM1 OS=Gallus gallus GN=MYSM1 PE=2
SV=1
Length = 832
Score = 40.4 bits (93), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 111 VPWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYF 157
+ WT EE LF GL K G+ W IA+ + SRT QV S+A++YF
Sbjct: 120 LKWTSEEKELFEQGLVKYGR-RWTKIAK-LIGSRTVLQVKSYARQYF 164
>sp|Q5RGA4|MYSM1_DANRE Histone H2A deubiquitinase MYSM1 OS=Danio rerio GN=mysm1 PE=2 SV=2
Length = 822
Score = 40.0 bits (92), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 113 WTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYF 157
W EEE LF GL + G+ W IA+ + +RT QV S+A++YF
Sbjct: 102 WAEEEKELFEKGLAQFGRR-WTKIAK-LIGTRTVLQVKSYAKQYF 144
>sp|A0JMR6|MYSM1_XENLA Histone H2A deubiquitinase MYSM1 OS=Xenopus laevis GN=mysm1 PE=2
SV=1
Length = 818
Score = 39.3 bits (90), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 111 VPWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYF 157
V WT+EE LF GL G+ W IAR + SR+ QV ++A+ YF
Sbjct: 110 VKWTKEEKNLFEQGLATFGRR-WTSIAR-LIGSRSVLQVKNYARHYF 154
>sp|Q5RBN9|TAD2B_PONAB Transcriptional adapter 2-beta OS=Pongo abelii GN=TADA2B PE=2 SV=1
Length = 420
Score = 38.9 bits (89), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 113 WTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFI 158
WT E +L L +++ G G+W +A + SRTP +V H +I
Sbjct: 70 WTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHYVSMYI 115
>sp|Q86TJ2|TAD2B_HUMAN Transcriptional adapter 2-beta OS=Homo sapiens GN=TADA2B PE=1 SV=2
Length = 420
Score = 38.9 bits (89), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 113 WTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFI 158
WT E +L L +++ G G+W +A + SRTP +V H +I
Sbjct: 70 WTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHYVSMYI 115
>sp|Q9C9F6|APRR6_ARATH Putative two-component response regulator-like APRR6 OS=Arabidopsis
thaliana GN=APRR6 PE=3 SV=2
Length = 755
Score = 38.1 bits (87), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Query: 94 PAHGSGSSNRRCERKKGV-----PWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSR---T 145
P++ N+R E KK V W E H F+ + LG+ D+R + +M+ T
Sbjct: 203 PSYAIEIENKRKEWKKSVGRRKSLWNSERHMKFIAAISILGEEDFRPKSILEIMNDPNLT 262
Query: 146 PTQVASHAQKY 156
QV SH QKY
Sbjct: 263 HRQVGSHLQKY 273
>sp|Q9LYP5|ARR21_ARATH Putative two-component response regulator ARR21 OS=Arabidopsis
thaliana GN=ARR21 PE=2 SV=3
Length = 613
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 99 GSSNRRCERKKGVPWTEEEHRLFLIGLQKLGKGDW---RGIARNYVMSRTPTQVASHAQK 155
G S + +KK + WT+ H LFL ++ +G + +A V T VASH QK
Sbjct: 213 GESMSQPAKKKKIQWTDSLHDLFLQAIRHIGLDKAVPKKILAFMSVPYLTRENVASHLQK 272
Query: 156 YFIRQSNATRRKRRSSLFDMVAD 178
Y I RR L+ M++D
Sbjct: 273 YRI----FLRRVAEQGLYSMLSD 291
>sp|Q15554|TERF2_HUMAN Telomeric repeat-binding factor 2 OS=Homo sapiens GN=TERF2 PE=1
SV=2
Length = 500
Score = 36.6 bits (83), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 109 KGVPWTEEEHRLFLIGLQKLGKGDWRGIARNY-VMSRTPTQV 149
K WT EE G+QK G+G+W I++NY ++RT +
Sbjct: 446 KKQKWTVEESEWVKAGVQKYGEGNWAAISKNYPFVNRTAVMI 487
>sp|Q9SIV3|GLK1_ARATH Transcription activator GLK1 OS=Arabidopsis thaliana GN=GLK1 PE=2
SV=2
Length = 420
Score = 35.4 bits (80), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 10/83 (12%)
Query: 101 SNRRCERKKGVPWTEEEHRLFLIGLQKLGKGDW---RGIARNYVMSRTPTQVASHAQKY- 156
SN +RK V WT E HR F+ +++LG R + V T VASH QKY
Sbjct: 146 SNNEGKRKVKVDWTPELHRRFVEAVEQLGVDKAVPSRILELMGVHCLTRHNVASHLQKYR 205
Query: 157 ------FIRQSNATRRKRRSSLF 173
R++ A R+ ++
Sbjct: 206 SHRKHLLAREAEAANWTRKRHIY 228
>sp|Q02336|ADA2_YEAST Transcriptional adapter 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=ADA2 PE=1 SV=1
Length = 434
Score = 35.4 bits (80), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 113 WTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFI 158
W +E + G Q LG G+W+ IA +++ SR +V H KY++
Sbjct: 65 WGADEELQLIKGAQTLGLGNWQDIA-DHIGSRGKEEVKEHYLKYYL 109
>sp|Q503N9|TAD2B_DANRE Transcriptional adapter 2-beta OS=Danio rerio GN=tada2b PE=2 SV=1
Length = 486
Score = 35.0 bits (79), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 113 WTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFI 158
WT E + L +++ G G+W +A + SRTP +V H +I
Sbjct: 70 WTSREEQSLLDAIEQYGFGNWEDMAAHVGASRTPQEVMDHYVSMYI 115
>sp|Q7Y0W5|EHD1_ORYSJ Two-component response regulator EHD1 OS=Oryza sativa subsp.
japonica GN=EHD1 PE=1 SV=1
Length = 341
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 17/101 (16%)
Query: 61 SSSSAAASPNPDSPLSDHVRDPNHLTDGYLSDDPAHGSGSSNRRCERKKGVPWTEEEHRL 120
+++ + A+ +PL + VRD +G ++D G K + WT + HR
Sbjct: 161 ATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLG----------KSRLTWTTQLHRQ 210
Query: 121 FLIGLQKLGKG-----DWRGIARNYVMSRTPTQVASHAQKY 156
F+ + LG+ GI + V T QVASH QKY
Sbjct: 211 FIAAVNHLGEDKAVPKKILGIMK--VKHLTREQVASHLQKY 249
>sp|Q7Y0W3|EHD1_ORYSI Two-component response regulator EHD1 OS=Oryza sativa subsp. indica
PE=2 SV=1
Length = 341
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 17/101 (16%)
Query: 61 SSSSAAASPNPDSPLSDHVRDPNHLTDGYLSDDPAHGSGSSNRRCERKKGVPWTEEEHRL 120
+++ + A+ +PL + VRD +G ++D G K + WT + HR
Sbjct: 161 ATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLG----------KSRLTWTTQLHRQ 210
Query: 121 FLIGLQKLGKG-----DWRGIARNYVMSRTPTQVASHAQKY 156
F+ + LG+ GI + V T QVASH QKY
Sbjct: 211 FIAAVNHLGEDKAVPKKILGIMK--VKHLTREQVASHLQKY 249
>sp|Q9FFH0|GLK2_ARATH Transcription activator GLK2 OS=Arabidopsis thaliana GN=GLK2 PE=2
SV=1
Length = 386
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 100 SSNRRCERKKGVPWTEEEHRLFLIGLQKLGKGDW---RGIARNYVMSRTPTQVASHAQKY 156
S ++K V WT E HR F+ +++LG R + V S T VASH QKY
Sbjct: 139 SDENDIKKKPKVDWTPELHRKFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASHLQKY 198
Query: 157 FIRQSNATRRKRRSSLFDM 175
+ + R+ ++ +++
Sbjct: 199 RSHRKHLLAREAEAASWNL 217
>sp|Q8IYH5|ZZZ3_HUMAN ZZ-type zinc finger-containing protein 3 OS=Homo sapiens GN=ZZZ3
PE=1 SV=1
Length = 903
Score = 33.5 bits (75), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 113 WTEEEHR---LFLIGL--QKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIRQSNA 163
WT EE + LI +++ W+ IA + + +RT QVAS QKYFI+ + A
Sbjct: 655 WTVEEQKKLEQLLIKYPPEEVESRRWQKIA-DELGNRTAKQVASRVQKYFIKLTKA 709
>sp|Q9PU53|TERF2_CHICK Telomeric repeat-binding factor 2 OS=Gallus gallus GN=TERF2 PE=1
SV=2
Length = 718
Score = 33.5 bits (75), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 87 DGYLSDDPAHGSGSSNRRCERKKGVPWTEEEHRLFLIGLQKLGKGDWRGIARNY-VMSRT 145
D +D + S+N K WT +E G++K G+G W+ I+ Y +RT
Sbjct: 642 DELFTDAALTETSSNNSTVYGSKKQKWTVQESEWIKDGVRKYGEGRWKTISEKYPFQNRT 701
Query: 146 PTQV 149
Q+
Sbjct: 702 SVQI 705
>sp|P70371|TERF1_MOUSE Telomeric repeat-binding factor 1 OS=Mus musculus GN=Terf1 PE=1
SV=1
Length = 421
Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 107 RKKGVPWTEEEHRLFLIGLQKLGKGDWRGIARNY 140
R+K W EE R+ G++K G+G+W I +Y
Sbjct: 364 RRKRQTWLWEEDRILKCGVKKYGEGNWAKILSHY 397
>sp|Q54FL0|MYBO_DICDI Myb-like protein O OS=Dictyostelium discoideum GN=mybO PE=3 SV=1
Length = 1327
Score = 33.1 bits (74), Expect = 3.0, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 96 HGSGSSNRRCERKKGVPWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQK 155
H S S N R + + +T E L L+G+++ G +WR I + Y ++T Q+ H K
Sbjct: 888 HFSESYNYRNVKLNQLKFTGGEDLLLLMGVKRFGTFNWRIIQKRYFPNKTDDQLF-HRYK 946
Query: 156 YFIRQSNATRRKRR 169
+ S+A + ++
Sbjct: 947 NLLSHSSANNQLKQ 960
>sp|Q9ZVD3|ARR13_ARATH Putative two-component response regulator ARR13 OS=Arabidopsis
thaliana GN=ARR13 PE=2 SV=2
Length = 572
Score = 33.1 bits (74), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Query: 107 RKKGVPWTEEEHRLFLIGLQKLGKGDW---RGIARNYVMSRTPTQVASHAQKYFIRQSNA 163
+KK + WT LFL +Q +G + +A V T VASH QKY +
Sbjct: 224 KKKKIWWTNPLQDLFLQAIQHIGYDKVVPKKILAIMNVPYLTRENVASHLQKYRLFVKRV 283
Query: 164 TRRKRRSSLFDMVADDMATDT 184
+ R S L D D M T
Sbjct: 284 VHQGRFSMLSDRGKDSMFRQT 304
>sp|Q3SZP8|TAD2A_BOVIN Transcriptional adapter 2-alpha OS=Bos taurus GN=TADA2A PE=2 SV=1
Length = 443
Score = 33.1 bits (74), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 113 WTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFI 158
WT +E L + G G+W+ +A N + ++T + H K+FI
Sbjct: 75 WTAQEEMALLEAVMDCGFGNWQDVA-NQMCTKTKEECEKHYMKHFI 119
>sp|O75478|TAD2A_HUMAN Transcriptional adapter 2-alpha OS=Homo sapiens GN=TADA2A PE=1 SV=3
Length = 443
Score = 32.7 bits (73), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 113 WTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFI 158
WT +E L + G G+W+ +A N + ++T + H K+FI
Sbjct: 75 WTAQEEMALLEAVMDCGFGNWQDVA-NQMCTKTKEECEKHYMKHFI 119
>sp|Q6AYE3|TAD2A_RAT Transcriptional adapter 2-alpha OS=Rattus norvegicus GN=Tada2a PE=2
SV=1
Length = 443
Score = 32.7 bits (73), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 113 WTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFI 158
WT +E L + G G+W+ +A N + ++T + H K+FI
Sbjct: 75 WTAQEEMALLEAVMDCGFGNWQDVA-NQMCTKTKEECEKHYMKHFI 119
>sp|Q7XBH4|MYB4_ORYSJ Myb-related protein Myb4 OS=Oryza sativa subsp. japonica GN=MYB4
PE=2 SV=2
Length = 257
Score = 32.7 bits (73), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Query: 105 CER---KKGVPWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSR 144
CE+ KKG PWT EE ++ + +Q+ G G+WR + + + R
Sbjct: 7 CEKMGLKKG-PWTPEEDKVLVAHIQRHGHGNWRALPKQAGLLR 48
>sp|Q8CHV6|TAD2A_MOUSE Transcriptional adapter 2-alpha OS=Mus musculus GN=Tada2a PE=1 SV=1
Length = 443
Score = 32.7 bits (73), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 113 WTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFI 158
WT +E L + G G+W+ +A N + ++T + H K+FI
Sbjct: 75 WTAQEEMALLEAVMDCGFGNWQDVA-NQMCTKTKEECEKHYMKHFI 119
>sp|F4IEY4|TRB5_ARATH Telomere repeat-binding factor 5 OS=Arabidopsis thaliana
GN=At1g72740 PE=2 SV=1
Length = 287
Score = 32.3 bits (72), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 111 VPWTEEEHRLFLIGLQKLGKGDWRGIARN 139
+ WT EE L G++K G G W+ I R+
Sbjct: 6 LKWTAEEEEALLAGIRKHGPGKWKNILRD 34
>sp|Q9FGT7|ARR18_ARATH Two-component response regulator ARR18 OS=Arabidopsis thaliana
GN=ARR18 PE=2 SV=2
Length = 635
Score = 32.3 bits (72), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 17/101 (16%)
Query: 97 GSGSSNRRCERKKGVPWTEEEHRLFLIGLQKLGKGDW---RGIARNYVMSRTPTQVASHA 153
G GS R+ R V W++E H+ F+ +Q+LG + + + T VASH
Sbjct: 186 GDGSGTRKKPR---VVWSQELHQKFVSAVQQLGLDKAVPKKILDLMSIEGLTRENVASHL 242
Query: 154 QKYFI--------RQSNAT---RRKRRSSLFDMVADDMATD 183
QKY + +Q N T R SS F M D D
Sbjct: 243 QKYRLYLKKIDEGQQQNMTPDAFGTRDSSYFQMAQLDGLRD 283
>sp|Q55DP9|MYBP_DICDI Myb-like protein P OS=Dictyostelium discoideum GN=mybP PE=3 SV=1
Length = 1448
Score = 32.0 bits (71), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 9/72 (12%)
Query: 97 GSGSSNRRCERKKGVPWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKY 156
G N + + + + WTE E LF I +QK G + IA +YV S+T Q S Y
Sbjct: 1349 GDKEYNNKDKESENLRWTEHERELFNIAVQKHG-TQFNLIA-DYVQSKTGAQCRSF---Y 1403
Query: 157 FIRQSNATRRKR 168
+ N+ R+ R
Sbjct: 1404 Y----NSKRKSR 1411
>sp|Q8I8V0|TAD2B_DROME Transcriptional adapter 2B OS=Drosophila melanogaster GN=Ada2b PE=1
SV=1
Length = 555
Score = 32.0 bits (71), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 23/156 (14%)
Query: 98 SGSSNRRCERKKGVPWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYF 157
+G+S R KG WT E L +++ G G+W I++ ++ +++ F
Sbjct: 60 TGTSILSVFRGKGA-WTAREEIRLLDAIEQYGFGNWEDISK-HIETKSAEDAKEEYVNKF 117
Query: 158 I-----RQSNATRRKRRSSLFDMVADDMA--------TDTPPVP---EEQVMLP-----S 196
+ R + + +R L D DD A + PP+ +E + L
Sbjct: 118 VNGTIGRATWTPAQSQRPRLIDHTGDDDAGPLGTNALSTLPPLEINSDEAMQLGYMPNRD 177
Query: 197 PLARESDNTSSQPSLNLSLSTEFEPMEAVCKETEKD 232
RE D T+ Q N+SLS+E ++ + K D
Sbjct: 178 SFEREYDPTAEQLISNISLSSEDTEVDVMLKLAHVD 213
>sp|P81392|MYB06_ANTMA Myb-related protein 306 OS=Antirrhinum majus GN=MYB306 PE=2 SV=1
Length = 316
Score = 31.6 bits (70), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 105 CERKKGV---PWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSR 144
C K GV PWT EE + + +Q+ G G+WR I N + R
Sbjct: 6 CCDKIGVKKGPWTPEEDIILVSYIQEHGPGNWRAIPSNTGLLR 48
>sp|Q0JIC2|GAM1_ORYSJ Transcription factor GAMYB OS=Oryza sativa subsp. japonica GN=GAM1
PE=2 SV=1
Length = 553
Score = 31.6 bits (70), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 7/59 (11%)
Query: 92 DDPAHGSGSSNRRCER------KKGVPWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSR 144
D P GSS R KKG PWT E + + ++K G+G+W + +N + R
Sbjct: 19 DSPVADDGSSGGSPHRGGGPPLKKG-PWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFR 76
>sp|A2WW87|GAM1_ORYSI Transcription factor GAMYB OS=Oryza sativa subsp. indica GN=GAM1
PE=2 SV=1
Length = 553
Score = 31.6 bits (70), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 15/73 (20%)
Query: 72 DSPLSDHVRDPNHLTDGYLSDDPAHGSGSSNRRCERKKGVPWTEEEHRLFLIGLQKLGKG 131
DSP++D DG P G G KKG PWT E + + ++K G+G
Sbjct: 19 DSPVAD---------DGSSGGSPHRGGGP-----PLKKG-PWTSAEDAILVDYVKKHGEG 63
Query: 132 DWRGIARNYVMSR 144
+W + +N + R
Sbjct: 64 NWNAVQKNTGLFR 76
>sp|Q9CZU3|SK2L2_MOUSE Superkiller viralicidic activity 2-like 2 OS=Mus musculus
GN=Skiv2l2 PE=2 SV=1
Length = 1040
Score = 31.6 bits (70), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 203 DNTSSQPSLNLSLSTEFEPMEAVCKETEKDSEEPVIDLNEFTPMVSSFFPAYMPVPYTY 261
+N+S P L L+ M+ K K S E ++++E T + SSF P M V YT+
Sbjct: 914 ENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTW 971
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.129 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 141,549,349
Number of Sequences: 539616
Number of extensions: 6267474
Number of successful extensions: 13156
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 66
Number of HSP's that attempted gapping in prelim test: 13086
Number of HSP's gapped (non-prelim): 123
length of query: 357
length of database: 191,569,459
effective HSP length: 119
effective length of query: 238
effective length of database: 127,355,155
effective search space: 30310526890
effective search space used: 30310526890
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)