Query 018346
Match_columns 357
No_of_seqs 481 out of 4759
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 13:49:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018346.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018346hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hem_A Cyclopropane-fatty-acyl 100.0 1.7E-36 6E-41 278.7 28.1 265 75-354 18-302 (302)
2 1kpg_A CFA synthase;, cyclopro 100.0 2.4E-33 8.1E-38 255.8 28.9 264 76-354 11-287 (287)
3 2fk8_A Methoxy mycolic acid sy 100.0 1.4E-31 4.9E-36 247.7 26.0 265 77-356 38-315 (318)
4 3bus_A REBM, methyltransferase 100.0 1.5E-26 5.1E-31 209.0 24.0 258 76-355 8-273 (273)
5 2o57_A Putative sarcosine dime 99.9 3.1E-23 1E-27 189.7 27.5 258 76-356 22-295 (297)
6 3ujc_A Phosphoethanolamine N-m 99.9 9.9E-22 3.4E-26 176.3 19.9 218 117-355 43-266 (266)
7 2b3t_A Protein methyltransfera 99.9 2E-21 7E-26 175.9 15.7 191 25-234 19-239 (276)
8 3vc1_A Geranyl diphosphate 2-C 99.9 1E-20 3.4E-25 174.3 17.3 211 78-302 68-284 (312)
9 3kkz_A Uncharacterized protein 99.8 2.5E-20 8.5E-25 167.7 16.0 198 120-331 36-245 (267)
10 1nv8_A HEMK protein; class I a 99.8 2.8E-20 9.5E-25 168.9 13.7 202 13-235 20-251 (284)
11 1nkv_A Hypothetical protein YJ 99.8 5E-19 1.7E-23 157.9 20.4 120 117-237 24-144 (256)
12 4gek_A TRNA (CMO5U34)-methyltr 99.8 5.1E-19 1.8E-23 158.5 16.0 117 118-236 60-181 (261)
13 3f4k_A Putative methyltransfer 99.8 4.1E-18 1.4E-22 152.1 20.4 115 120-236 36-153 (257)
14 3mgg_A Methyltransferase; NYSG 99.8 4.6E-19 1.6E-23 160.1 13.7 129 109-237 17-146 (276)
15 1pjz_A Thiopurine S-methyltran 99.8 2.2E-18 7.6E-23 148.7 16.5 114 120-235 13-142 (203)
16 1vl5_A Unknown conserved prote 99.8 5.7E-19 1.9E-23 158.1 12.4 119 117-237 25-144 (260)
17 3iv6_A Putative Zn-dependent a 99.8 1E-18 3.4E-23 155.8 13.2 152 118-273 34-210 (261)
18 3g5l_A Putative S-adenosylmeth 99.8 1E-19 3.4E-24 162.3 5.9 185 119-316 34-220 (253)
19 3dh0_A SAM dependent methyltra 99.8 2.1E-18 7.1E-23 150.2 14.0 119 120-238 28-148 (219)
20 3bkx_A SAM-dependent methyltra 99.8 3.6E-18 1.2E-22 154.0 15.8 131 108-238 22-164 (275)
21 3fpf_A Mtnas, putative unchara 99.8 1.6E-18 5.6E-23 156.0 13.0 155 76-234 68-223 (298)
22 3dlc_A Putative S-adenosyl-L-m 99.8 4.6E-18 1.6E-22 147.6 14.4 117 117-235 32-150 (219)
23 1xxl_A YCGJ protein; structura 99.8 6.2E-18 2.1E-22 149.6 14.4 118 118-237 10-128 (239)
24 1dl5_A Protein-L-isoaspartate 99.8 7.7E-19 2.6E-23 162.1 8.3 177 116-303 62-244 (317)
25 3dtn_A Putative methyltransfer 99.8 8.1E-18 2.8E-22 148.1 14.2 118 119-238 33-153 (234)
26 3jwh_A HEN1; methyltransferase 99.8 9.8E-18 3.3E-22 145.9 14.4 115 119-233 19-141 (217)
27 3gu3_A Methyltransferase; alph 99.7 8.3E-18 2.8E-22 152.7 13.5 117 118-235 10-128 (284)
28 3hnr_A Probable methyltransfer 99.7 6.6E-18 2.3E-22 147.1 12.4 105 127-237 43-149 (220)
29 1u2z_A Histone-lysine N-methyl 99.7 6.5E-18 2.2E-22 160.5 13.2 209 17-234 123-360 (433)
30 3e05_A Precorrin-6Y C5,15-meth 99.7 4.2E-17 1.4E-21 140.6 17.2 117 117-236 28-145 (204)
31 4htf_A S-adenosylmethionine-de 99.7 6.1E-18 2.1E-22 153.5 12.2 117 118-237 58-177 (285)
32 3jwg_A HEN1, methyltransferase 99.7 1.1E-17 3.9E-22 145.6 13.3 115 118-232 18-140 (219)
33 2xvm_A Tellurite resistance pr 99.7 2.2E-17 7.5E-22 141.3 14.9 114 121-236 24-139 (199)
34 1af7_A Chemotaxis receptor met 99.7 1.4E-17 4.7E-22 149.7 12.9 182 22-233 28-252 (274)
35 3p9n_A Possible methyltransfer 99.7 4E-17 1.4E-21 139.0 15.2 110 128-238 43-158 (189)
36 2p35_A Trans-aconitate 2-methy 99.7 9.7E-18 3.3E-22 149.7 11.6 115 118-237 22-136 (259)
37 3ou2_A SAM-dependent methyltra 99.7 8.5E-17 2.9E-21 139.6 16.8 105 127-237 44-150 (218)
38 3dli_A Methyltransferase; PSI- 99.7 9.1E-18 3.1E-22 148.5 10.6 162 128-309 40-219 (240)
39 4fsd_A Arsenic methyltransfera 99.7 1.1E-17 3.8E-22 158.3 11.7 111 127-237 81-207 (383)
40 3dxy_A TRNA (guanine-N(7)-)-me 99.7 1.7E-17 5.9E-22 144.7 11.6 108 129-236 34-153 (218)
41 2gb4_A Thiopurine S-methyltran 99.7 2E-17 7E-22 147.3 12.2 107 127-235 66-193 (252)
42 3g89_A Ribosomal RNA small sub 99.7 4.5E-17 1.5E-21 144.9 14.2 102 128-233 79-184 (249)
43 3hm2_A Precorrin-6Y C5,15-meth 99.7 5.7E-17 2E-21 136.2 14.1 115 117-236 13-130 (178)
44 3ofk_A Nodulation protein S; N 99.7 2.3E-17 7.8E-22 143.4 11.8 110 123-236 45-157 (216)
45 3ccf_A Cyclopropane-fatty-acyl 99.7 3.4E-17 1.2E-21 148.1 13.0 111 121-238 49-159 (279)
46 1wzn_A SAM-dependent methyltra 99.7 8.3E-17 2.9E-21 143.2 14.6 118 115-235 27-147 (252)
47 1dus_A MJ0882; hypothetical pr 99.7 1.2E-16 4.2E-21 135.8 15.0 116 119-236 42-160 (194)
48 3g5t_A Trans-aconitate 3-methy 99.7 9.1E-17 3.1E-21 146.8 15.1 108 128-236 35-152 (299)
49 3h2b_A SAM-dependent methyltra 99.7 5.6E-17 1.9E-21 139.5 12.6 138 78-238 6-146 (203)
50 3m70_A Tellurite resistance pr 99.7 1.9E-16 6.5E-21 143.7 16.5 105 129-236 120-226 (286)
51 1ve3_A Hypothetical protein PH 99.7 1.4E-16 4.8E-21 139.2 15.1 118 114-236 25-145 (227)
52 2p7i_A Hypothetical protein; p 99.7 2.6E-17 8.9E-22 145.7 10.2 105 128-238 41-146 (250)
53 1yzh_A TRNA (guanine-N(7)-)-me 99.7 1.4E-16 4.7E-21 138.5 14.5 106 129-234 41-157 (214)
54 3i9f_A Putative type 11 methyl 99.7 4.6E-17 1.6E-21 136.0 10.8 106 123-238 11-117 (170)
55 4hg2_A Methyltransferase type 99.7 2.6E-17 9.1E-22 146.9 9.7 110 117-237 29-139 (257)
56 3lbf_A Protein-L-isoaspartate 99.7 1.2E-16 4.2E-21 138.1 13.7 111 117-235 65-176 (210)
57 1y8c_A S-adenosylmethionine-de 99.7 5.6E-17 1.9E-21 143.4 11.6 105 129-236 37-145 (246)
58 3lcc_A Putative methyl chlorid 99.7 4.2E-17 1.4E-21 143.7 10.6 115 120-237 58-175 (235)
59 3mti_A RRNA methylase; SAM-dep 99.7 1.2E-16 4.2E-21 135.3 13.1 108 126-235 19-137 (185)
60 2yqz_A Hypothetical protein TT 99.7 1E-16 3.6E-21 143.2 13.3 104 126-232 36-140 (263)
61 3njr_A Precorrin-6Y methylase; 99.7 3.7E-16 1.3E-20 134.9 16.0 110 120-236 46-157 (204)
62 2ex4_A Adrenal gland protein A 99.7 3.3E-17 1.1E-21 144.9 9.3 108 129-237 79-189 (241)
63 3g07_A 7SK snRNA methylphospha 99.7 6.7E-17 2.3E-21 147.3 11.5 106 129-234 46-221 (292)
64 3ege_A Putative methyltransfer 99.7 6.8E-17 2.3E-21 144.8 11.3 113 117-238 22-135 (261)
65 1xtp_A LMAJ004091AAA; SGPP, st 99.7 1.2E-16 4.1E-21 142.2 12.7 121 112-235 76-199 (254)
66 2r3s_A Uncharacterized protein 99.7 4.2E-16 1.4E-20 144.6 16.7 119 118-237 152-275 (335)
67 3ocj_A Putative exported prote 99.7 3.9E-17 1.3E-21 149.7 9.6 112 127-238 116-232 (305)
68 1jsx_A Glucose-inhibited divis 99.7 2.7E-16 9.3E-21 135.6 14.0 102 129-234 65-166 (207)
69 3l8d_A Methyltransferase; stru 99.7 1.9E-16 6.4E-21 139.9 13.3 106 128-238 52-158 (242)
70 2fca_A TRNA (guanine-N(7)-)-me 99.7 1.7E-16 5.8E-21 137.9 12.8 106 129-234 38-154 (213)
71 2p8j_A S-adenosylmethionine-de 99.7 1.6E-16 5.5E-21 137.1 12.4 110 128-239 22-134 (209)
72 3pfg_A N-methyltransferase; N, 99.7 1.9E-16 6.7E-21 141.8 13.0 139 78-236 11-154 (263)
73 2gs9_A Hypothetical protein TT 99.7 2.4E-16 8.2E-21 136.4 13.0 106 121-237 29-136 (211)
74 3fzg_A 16S rRNA methylase; met 99.7 4.9E-17 1.7E-21 136.0 8.0 112 116-231 38-150 (200)
75 3evz_A Methyltransferase; NYSG 99.7 7.7E-16 2.6E-20 135.0 16.1 109 126-236 52-182 (230)
76 3bkw_A MLL3908 protein, S-aden 99.7 1.9E-16 6.4E-21 139.9 12.2 111 121-236 35-147 (243)
77 3thr_A Glycine N-methyltransfe 99.7 1.3E-16 4.4E-21 145.2 11.0 107 128-236 56-178 (293)
78 3e23_A Uncharacterized protein 99.7 2.4E-16 8.2E-21 136.4 11.9 102 128-237 42-145 (211)
79 3sm3_A SAM-dependent methyltra 99.7 2.5E-16 8.6E-21 138.1 12.2 108 128-237 29-145 (235)
80 3uwp_A Histone-lysine N-methyl 99.7 3.6E-16 1.2E-20 145.9 13.7 122 114-236 158-291 (438)
81 3b3j_A Histone-arginine methyl 99.7 1.2E-16 4E-21 155.0 10.9 198 51-267 88-302 (480)
82 1zx0_A Guanidinoacetate N-meth 99.7 2.5E-17 8.4E-22 145.4 5.4 154 78-234 7-171 (236)
83 3eey_A Putative rRNA methylase 99.7 3.2E-16 1.1E-20 134.2 12.2 111 126-236 19-142 (197)
84 3mq2_A 16S rRNA methyltransfer 99.7 6.5E-17 2.2E-21 140.8 8.0 108 126-234 24-141 (218)
85 3lpm_A Putative methyltransfer 99.7 3.3E-16 1.1E-20 140.2 12.8 113 122-235 41-178 (259)
86 3dmg_A Probable ribosomal RNA 99.7 4.8E-16 1.6E-20 146.4 14.4 119 115-236 217-343 (381)
87 4dcm_A Ribosomal RNA large sub 99.7 4.8E-16 1.7E-20 146.2 14.4 115 121-235 214-336 (375)
88 3d2l_A SAM-dependent methyltra 99.7 1E-15 3.6E-20 135.1 15.6 111 120-236 26-140 (243)
89 2ift_A Putative methylase HI07 99.7 1.1E-16 3.6E-21 137.9 8.8 107 129-237 53-167 (201)
90 2esr_A Methyltransferase; stru 99.7 2E-16 6.9E-21 133.0 10.3 119 119-239 20-144 (177)
91 3mcz_A O-methyltransferase; ad 99.7 7.5E-16 2.5E-20 144.0 15.1 118 120-238 169-292 (352)
92 2kw5_A SLR1183 protein; struct 99.7 9.1E-16 3.1E-20 131.8 14.2 108 128-239 29-137 (202)
93 3gwz_A MMCR; methyltransferase 99.7 2.3E-15 7.7E-20 141.7 18.1 120 117-238 190-312 (369)
94 2qe6_A Uncharacterized protein 99.7 1E-15 3.5E-20 138.1 15.1 122 113-236 60-199 (274)
95 3g2m_A PCZA361.24; SAM-depende 99.7 2.4E-16 8.3E-21 144.0 11.1 117 119-238 73-195 (299)
96 2yxe_A Protein-L-isoaspartate 99.7 5.4E-16 1.8E-20 134.6 12.7 115 117-237 65-181 (215)
97 1xdz_A Methyltransferase GIDB; 99.7 2.8E-16 9.5E-21 139.0 10.8 102 128-233 69-174 (240)
98 4dzr_A Protein-(glutamine-N5) 99.7 4.6E-17 1.6E-21 140.8 5.6 118 116-234 16-166 (215)
99 3i53_A O-methyltransferase; CO 99.7 8.5E-16 2.9E-20 142.5 14.6 115 121-237 161-278 (332)
100 2aot_A HMT, histamine N-methyl 99.7 4.2E-16 1.4E-20 142.0 12.0 109 128-236 51-175 (292)
101 2fhp_A Methylase, putative; al 99.7 5.1E-16 1.7E-20 131.5 11.4 118 120-239 34-160 (187)
102 2ozv_A Hypothetical protein AT 99.7 4.7E-16 1.6E-20 139.3 11.6 115 122-236 29-173 (260)
103 1ri5_A MRNA capping enzyme; me 99.7 1E-15 3.4E-20 139.4 13.9 109 127-236 62-177 (298)
104 3tma_A Methyltransferase; thum 99.6 1.4E-15 4.9E-20 142.3 14.5 120 117-236 191-320 (354)
105 3bxo_A N,N-dimethyltransferase 99.6 1.6E-15 5.6E-20 133.5 14.0 103 128-237 39-145 (239)
106 1x19_A CRTF-related protein; m 99.6 3.1E-15 1.1E-19 140.2 16.7 118 118-237 179-299 (359)
107 3p2e_A 16S rRNA methylase; met 99.6 1.9E-16 6.5E-21 138.7 7.8 107 128-234 23-140 (225)
108 3bgv_A MRNA CAP guanine-N7 met 99.6 1.2E-15 4.2E-20 140.2 13.3 108 128-236 33-158 (313)
109 2fpo_A Methylase YHHF; structu 99.6 6.2E-16 2.1E-20 133.2 10.5 108 129-238 54-165 (202)
110 3e8s_A Putative SAM dependent 99.6 2.3E-16 8E-21 137.5 7.8 159 126-315 49-212 (227)
111 2vdw_A Vaccinia virus capping 99.6 8.1E-16 2.8E-20 140.6 11.7 108 129-237 48-173 (302)
112 1nt2_A Fibrillarin-like PRE-rR 99.6 2E-15 6.9E-20 130.8 13.6 106 125-234 53-162 (210)
113 1qzz_A RDMB, aclacinomycin-10- 99.6 2.2E-15 7.4E-20 142.0 14.9 114 119-234 172-288 (374)
114 1vbf_A 231AA long hypothetical 99.6 1.4E-15 4.8E-20 133.4 12.6 111 117-237 58-169 (231)
115 1ws6_A Methyltransferase; stru 99.6 3.4E-16 1.2E-20 130.5 8.2 106 129-239 41-153 (171)
116 1o9g_A RRNA methyltransferase; 99.6 6.3E-16 2.2E-20 137.6 10.4 117 116-232 38-213 (250)
117 3gdh_A Trimethylguanosine synt 99.6 2.1E-17 7.3E-22 146.2 0.6 103 129-233 78-181 (241)
118 3dp7_A SAM-dependent methyltra 99.6 2.7E-15 9.1E-20 140.9 14.9 109 128-237 178-291 (363)
119 3dr5_A Putative O-methyltransf 99.6 2.1E-15 7.2E-20 131.7 13.1 118 114-234 41-164 (221)
120 2yxd_A Probable cobalt-precorr 99.6 4.1E-15 1.4E-19 125.1 14.1 111 117-236 23-134 (183)
121 3mb5_A SAM-dependent methyltra 99.6 2.4E-15 8.1E-20 134.1 13.3 113 119-236 83-197 (255)
122 2pxx_A Uncharacterized protein 99.6 1E-15 3.5E-20 132.4 10.5 107 128-237 41-163 (215)
123 2ip2_A Probable phenazine-spec 99.6 2.6E-15 9E-20 139.3 13.9 117 118-237 157-276 (334)
124 3ggd_A SAM-dependent methyltra 99.6 1.4E-15 4.9E-20 134.6 11.5 106 127-237 54-167 (245)
125 3u81_A Catechol O-methyltransf 99.6 2.4E-15 8.1E-20 131.3 12.6 107 129-236 58-173 (221)
126 3ckk_A TRNA (guanine-N(7)-)-me 99.6 1.6E-15 5.4E-20 133.7 11.5 108 128-235 45-170 (235)
127 1yb2_A Hypothetical protein TA 99.6 1.5E-15 5.2E-20 137.1 11.4 112 120-236 101-214 (275)
128 2pjd_A Ribosomal RNA small sub 99.6 1.2E-15 4E-20 142.3 10.9 113 121-235 188-305 (343)
129 1jg1_A PIMT;, protein-L-isoasp 99.6 1.7E-15 5.8E-20 133.5 11.4 114 117-237 79-193 (235)
130 3ntv_A MW1564 protein; rossman 99.6 1.5E-15 5.2E-20 133.6 11.0 103 129-234 71-177 (232)
131 3orh_A Guanidinoacetate N-meth 99.6 4.2E-16 1.5E-20 137.6 7.4 103 128-232 59-169 (236)
132 3htx_A HEN1; HEN1, small RNA m 99.6 2.7E-15 9.3E-20 149.8 13.7 118 118-236 710-837 (950)
133 1fbn_A MJ fibrillarin homologu 99.6 2E-15 7E-20 132.6 11.4 107 122-232 67-177 (230)
134 2a14_A Indolethylamine N-methy 99.6 1.6E-15 5.3E-20 136.1 10.5 107 126-234 52-198 (263)
135 1tw3_A COMT, carminomycin 4-O- 99.6 6E-15 2E-19 138.3 14.6 115 119-235 173-290 (360)
136 3grz_A L11 mtase, ribosomal pr 99.6 2.5E-15 8.4E-20 129.5 10.9 105 127-236 58-162 (205)
137 3a27_A TYW2, uncharacterized p 99.6 3.8E-15 1.3E-19 134.2 12.1 106 127-236 117-222 (272)
138 2h00_A Methyltransferase 10 do 99.6 6.8E-16 2.3E-20 137.6 7.1 117 116-232 50-191 (254)
139 4e2x_A TCAB9; kijanose, tetron 99.6 4.7E-16 1.6E-20 148.7 6.5 122 109-236 87-211 (416)
140 3cgg_A SAM-dependent methyltra 99.6 7.2E-15 2.5E-19 124.8 13.1 103 127-236 44-150 (195)
141 3duw_A OMT, O-methyltransferas 99.6 7.5E-15 2.6E-19 128.1 13.5 104 129-235 58-169 (223)
142 2pwy_A TRNA (adenine-N(1)-)-me 99.6 6.7E-15 2.3E-19 131.2 13.4 113 119-236 86-201 (258)
143 1l3i_A Precorrin-6Y methyltran 99.6 6.3E-15 2.1E-19 124.9 12.5 113 119-236 23-137 (192)
144 2frn_A Hypothetical protein PH 99.6 2.7E-15 9.4E-20 135.6 10.8 104 128-236 124-228 (278)
145 2y1w_A Histone-arginine methyl 99.6 4.1E-15 1.4E-19 138.8 12.2 115 119-235 40-157 (348)
146 3ajd_A Putative methyltransfer 99.6 3.7E-15 1.3E-19 134.5 11.5 112 125-236 79-214 (274)
147 2igt_A SAM dependent methyltra 99.6 5.6E-15 1.9E-19 136.7 12.6 108 128-237 152-276 (332)
148 3tfw_A Putative O-methyltransf 99.6 1.2E-14 3.9E-19 129.3 14.0 105 129-236 63-173 (248)
149 2pbf_A Protein-L-isoaspartate 99.6 7.1E-15 2.4E-19 128.6 12.4 104 126-235 77-195 (227)
150 2fyt_A Protein arginine N-meth 99.6 1.1E-14 3.9E-19 135.3 14.1 109 120-230 55-168 (340)
151 3r0q_C Probable protein argini 99.6 7.3E-15 2.5E-19 138.5 12.9 113 120-234 54-170 (376)
152 2avn_A Ubiquinone/menaquinone 99.6 8.3E-15 2.8E-19 131.0 12.6 100 129-236 54-155 (260)
153 4df3_A Fibrillarin-like rRNA/T 99.6 5E-15 1.7E-19 129.3 10.8 108 123-234 71-183 (233)
154 3tr6_A O-methyltransferase; ce 99.6 8.8E-15 3E-19 127.8 12.4 104 129-235 64-176 (225)
155 3giw_A Protein of unknown func 99.6 9.4E-15 3.2E-19 130.0 12.3 152 85-237 25-204 (277)
156 2gpy_A O-methyltransferase; st 99.6 8.1E-15 2.8E-19 128.9 11.7 104 128-234 53-161 (233)
157 2ipx_A RRNA 2'-O-methyltransfe 99.6 8.5E-15 2.9E-19 128.8 11.7 108 123-234 71-183 (233)
158 2nxc_A L11 mtase, ribosomal pr 99.6 8.7E-15 3E-19 130.6 11.7 102 127-234 118-219 (254)
159 2i62_A Nicotinamide N-methyltr 99.6 4.8E-15 1.6E-19 132.5 9.9 108 126-234 53-199 (265)
160 2vdv_E TRNA (guanine-N(7)-)-me 99.6 1.5E-14 5.1E-19 128.4 13.0 107 128-234 48-174 (246)
161 1i9g_A Hypothetical protein RV 99.6 1.5E-14 5E-19 130.7 13.0 114 118-236 88-206 (280)
162 3q7e_A Protein arginine N-meth 99.6 9.9E-15 3.4E-19 136.2 12.1 103 128-232 65-172 (349)
163 1o54_A SAM-dependent O-methylt 99.6 1.4E-14 4.8E-19 130.8 12.7 113 119-236 102-216 (277)
164 3r3h_A O-methyltransferase, SA 99.6 4.1E-15 1.4E-19 131.7 8.8 117 115-237 49-174 (242)
165 3cc8_A Putative methyltransfer 99.6 8.4E-15 2.9E-19 127.8 10.6 107 121-237 25-134 (230)
166 1sui_A Caffeoyl-COA O-methyltr 99.6 2.3E-14 7.8E-19 127.3 13.4 113 116-234 69-191 (247)
167 2g72_A Phenylethanolamine N-me 99.6 5.6E-15 1.9E-19 134.2 9.3 104 129-233 71-215 (289)
168 3lst_A CALO1 methyltransferase 99.6 1.1E-14 3.7E-19 136.0 11.3 115 118-237 173-290 (348)
169 1i1n_A Protein-L-isoaspartate 99.6 4.4E-14 1.5E-18 123.5 14.4 110 121-236 67-185 (226)
170 3kr9_A SAM-dependent methyltra 99.6 2E-14 6.8E-19 124.9 11.9 105 128-234 14-120 (225)
171 1ixk_A Methyltransferase; open 99.6 1.8E-14 6.2E-19 132.5 12.3 114 123-236 112-249 (315)
172 1g8a_A Fibrillarin-like PRE-rR 99.6 2.4E-14 8.1E-19 125.3 12.3 107 123-233 67-178 (227)
173 3bzb_A Uncharacterized protein 99.6 5.7E-14 1.9E-18 127.2 14.8 117 117-234 67-206 (281)
174 2yvl_A TRMI protein, hypotheti 99.5 6.9E-14 2.4E-18 123.8 14.7 111 119-236 81-193 (248)
175 4a6d_A Hydroxyindole O-methylt 99.5 7.7E-14 2.6E-18 130.4 15.4 116 119-236 169-286 (353)
176 3q87_B N6 adenine specific DNA 99.5 1.5E-14 5.1E-19 121.0 9.5 96 128-236 22-126 (170)
177 1vlm_A SAM-dependent methyltra 99.5 3E-14 1E-18 124.0 11.4 94 130-236 48-142 (219)
178 3lec_A NADB-rossmann superfami 99.5 4.2E-14 1.4E-18 123.0 12.1 105 128-234 20-126 (230)
179 1r18_A Protein-L-isoaspartate( 99.5 3.6E-14 1.2E-18 124.2 11.7 110 120-235 73-196 (227)
180 1fp1_D Isoliquiritigenin 2'-O- 99.5 3.9E-14 1.3E-18 133.4 12.6 111 118-237 197-310 (372)
181 3c3p_A Methyltransferase; NP_9 99.5 3.7E-14 1.2E-18 122.6 11.3 102 129-234 56-161 (210)
182 1ej0_A FTSJ; methyltransferase 99.5 2.8E-14 9.5E-19 119.1 10.2 108 119-237 11-140 (180)
183 3gnl_A Uncharacterized protein 99.5 4.3E-14 1.5E-18 124.0 11.5 105 128-234 20-126 (244)
184 1g6q_1 HnRNP arginine N-methyl 99.5 5.5E-14 1.9E-18 130.0 12.8 103 127-231 36-143 (328)
185 4azs_A Methyltransferase WBDD; 99.5 3.7E-14 1.3E-18 140.7 12.2 110 128-239 65-179 (569)
186 3c3y_A Pfomt, O-methyltransfer 99.5 8.7E-14 3E-18 122.7 13.2 113 116-234 60-182 (237)
187 1uwv_A 23S rRNA (uracil-5-)-me 99.5 6.7E-14 2.3E-18 134.3 13.1 132 93-233 253-389 (433)
188 2plw_A Ribosomal RNA methyltra 99.5 6.3E-14 2.1E-18 120.1 11.5 106 120-236 12-157 (201)
189 2hnk_A SAM-dependent O-methylt 99.5 4.2E-14 1.4E-18 124.8 10.7 103 129-234 60-182 (239)
190 2qm3_A Predicted methyltransfe 99.5 1.1E-13 3.7E-18 130.4 13.9 105 128-234 171-279 (373)
191 3reo_A (ISO)eugenol O-methyltr 99.5 8.4E-14 2.9E-18 130.9 13.1 111 118-237 191-304 (368)
192 3cbg_A O-methyltransferase; cy 99.5 8.1E-14 2.8E-18 122.5 11.8 104 129-235 72-184 (232)
193 3p9c_A Caffeic acid O-methyltr 99.5 1.2E-13 4.1E-18 129.6 13.7 111 118-237 189-302 (364)
194 3adn_A Spermidine synthase; am 99.5 3.8E-14 1.3E-18 128.9 9.9 109 128-236 82-201 (294)
195 3id6_C Fibrillarin-like rRNA/T 99.5 2.2E-13 7.7E-18 119.1 14.2 105 125-234 72-182 (232)
196 4hc4_A Protein arginine N-meth 99.5 7.1E-14 2.4E-18 130.7 11.7 102 129-232 83-188 (376)
197 2avd_A Catechol-O-methyltransf 99.5 5.1E-14 1.7E-18 123.2 10.2 104 128-234 68-180 (229)
198 2b25_A Hypothetical protein; s 99.5 1.1E-13 3.6E-18 128.6 12.8 113 119-236 95-222 (336)
199 1p91_A Ribosomal RNA large sub 99.5 8.1E-14 2.8E-18 125.1 11.3 99 128-238 84-183 (269)
200 3k6r_A Putative transferase PH 99.5 5.1E-14 1.7E-18 126.4 9.8 105 127-236 123-228 (278)
201 3m33_A Uncharacterized protein 99.5 4.5E-14 1.6E-18 123.5 8.9 90 128-230 47-139 (226)
202 2f8l_A Hypothetical protein LM 99.5 1.2E-13 4.1E-18 128.6 12.2 109 127-236 128-259 (344)
203 1fp2_A Isoflavone O-methyltran 99.5 8E-14 2.7E-18 130.2 10.6 102 127-237 186-292 (352)
204 2b78_A Hypothetical protein SM 99.5 1.3E-13 4.5E-18 130.2 12.1 109 128-237 211-335 (385)
205 1zq9_A Probable dimethyladenos 99.5 1.2E-13 4.1E-18 125.2 11.3 112 116-230 15-144 (285)
206 3bwc_A Spermidine synthase; SA 99.5 7.9E-14 2.7E-18 127.6 9.8 109 127-235 93-212 (304)
207 3gjy_A Spermidine synthase; AP 99.5 1.4E-13 4.8E-18 125.4 10.7 107 130-236 90-203 (317)
208 4dmg_A Putative uncharacterize 99.5 1.1E-13 3.8E-18 130.7 10.3 107 128-237 213-330 (393)
209 3m6w_A RRNA methylase; rRNA me 99.5 1.2E-13 4E-18 132.6 10.5 112 124-236 96-232 (464)
210 2frx_A Hypothetical protein YE 99.5 2.7E-13 9.3E-18 131.1 12.9 112 125-236 111-249 (479)
211 2yxl_A PH0851 protein, 450AA l 99.5 3.5E-13 1.2E-17 129.9 13.6 115 122-236 252-392 (450)
212 3sso_A Methyltransferase; macr 99.5 1.2E-13 4E-18 128.7 9.7 109 117-236 205-327 (419)
213 3tm4_A TRNA (guanine N2-)-meth 99.5 3E-13 1E-17 127.3 12.7 111 121-234 210-330 (373)
214 1wxx_A TT1595, hypothetical pr 99.5 1.1E-13 3.7E-18 130.8 9.7 106 129-236 209-328 (382)
215 2bm8_A Cephalosporin hydroxyla 99.5 9.2E-14 3.1E-18 122.5 8.3 98 129-234 81-188 (236)
216 1yub_A Ermam, rRNA methyltrans 99.5 9.6E-15 3.3E-19 129.6 1.8 114 117-235 17-147 (245)
217 3m4x_A NOL1/NOP2/SUN family pr 99.5 1.5E-13 5E-18 131.7 10.1 113 124-236 100-237 (456)
218 3c0k_A UPF0064 protein YCCW; P 99.5 3.5E-13 1.2E-17 127.9 12.2 108 128-236 219-342 (396)
219 1xj5_A Spermidine synthase 1; 99.4 1.8E-13 6E-18 126.6 9.5 108 127-234 118-236 (334)
220 2as0_A Hypothetical protein PH 99.4 2E-13 7E-18 129.5 10.0 109 128-237 216-339 (396)
221 3lcv_B Sisomicin-gentamicin re 99.4 1.9E-13 6.6E-18 119.5 8.7 111 117-231 122-234 (281)
222 1wy7_A Hypothetical protein PH 99.4 2.8E-12 9.6E-17 110.3 15.9 99 126-230 46-146 (207)
223 2h1r_A Dimethyladenosine trans 99.4 7.6E-13 2.6E-17 120.7 12.9 109 117-228 30-154 (299)
224 3k0b_A Predicted N6-adenine-sp 99.4 1.1E-12 3.8E-17 123.9 14.0 121 117-237 189-354 (393)
225 3ldu_A Putative methylase; str 99.4 9.1E-13 3.1E-17 124.2 13.4 120 117-236 183-347 (385)
226 1sqg_A SUN protein, FMU protei 99.4 4.5E-13 1.6E-17 128.4 11.5 114 122-236 239-377 (429)
227 2pt6_A Spermidine synthase; tr 99.4 1.7E-13 5.7E-18 126.3 7.9 108 128-235 115-232 (321)
228 1ne2_A Hypothetical protein TA 99.4 1E-12 3.5E-17 112.5 12.4 96 126-232 48-145 (200)
229 3ldg_A Putative uncharacterize 99.4 1.6E-12 5.5E-17 122.2 14.7 121 117-237 182-347 (384)
230 1inl_A Spermidine synthase; be 99.4 2.3E-13 7.8E-18 124.0 8.6 108 128-235 89-207 (296)
231 2i7c_A Spermidine synthase; tr 99.4 2.4E-13 8.3E-18 123.0 8.6 109 127-235 76-194 (283)
232 1iy9_A Spermidine synthase; ro 99.4 2.6E-13 9E-18 122.3 8.7 108 128-235 74-191 (275)
233 1zg3_A Isoflavanone 4'-O-methy 99.4 4.6E-13 1.6E-17 125.4 10.5 102 127-237 191-297 (358)
234 2jjq_A Uncharacterized RNA met 99.4 2E-12 6.8E-17 123.4 15.0 108 116-233 280-387 (425)
235 3v97_A Ribosomal RNA large sub 99.4 4.3E-13 1.5E-17 135.6 11.0 106 129-235 539-659 (703)
236 2o07_A Spermidine synthase; st 99.4 2.7E-13 9.1E-18 123.9 8.4 109 127-235 93-211 (304)
237 2yx1_A Hypothetical protein MJ 99.4 5.4E-13 1.8E-17 123.8 10.5 101 128-237 194-295 (336)
238 3dou_A Ribosomal RNA large sub 99.4 8E-13 2.7E-17 112.6 10.7 108 117-237 12-143 (191)
239 1uir_A Polyamine aminopropyltr 99.4 2.5E-13 8.6E-18 124.8 7.9 108 128-235 76-197 (314)
240 2nyu_A Putative ribosomal RNA 99.4 1.3E-12 4.3E-17 111.3 11.2 99 127-236 20-148 (196)
241 2b2c_A Spermidine synthase; be 99.4 2.7E-13 9.3E-18 124.3 7.1 106 128-233 107-222 (314)
242 1mjf_A Spermidine synthase; sp 99.4 4.9E-13 1.7E-17 120.9 8.5 106 128-235 74-195 (281)
243 2zfu_A Nucleomethylin, cerebra 99.4 4.5E-13 1.5E-17 116.0 7.2 87 128-235 66-153 (215)
244 2okc_A Type I restriction enzy 99.4 8.2E-13 2.8E-17 127.2 9.1 120 117-236 159-310 (445)
245 3frh_A 16S rRNA methylase; met 99.4 2.2E-12 7.5E-17 111.8 10.7 102 128-234 104-206 (253)
246 2ih2_A Modification methylase 99.4 1.2E-12 4.2E-17 125.1 9.7 111 117-236 27-167 (421)
247 3hp7_A Hemolysin, putative; st 99.4 1.1E-12 3.9E-17 118.1 8.0 107 117-232 72-184 (291)
248 2wa2_A Non-structural protein 99.3 3.7E-13 1.3E-17 121.1 4.4 113 117-235 70-195 (276)
249 2oxt_A Nucleoside-2'-O-methylt 99.3 4.5E-13 1.5E-17 119.9 4.2 111 118-235 63-187 (265)
250 2ld4_A Anamorsin; methyltransf 99.3 5.8E-13 2E-17 111.7 4.3 90 125-234 8-102 (176)
251 3gru_A Dimethyladenosine trans 99.3 2.4E-11 8.2E-16 110.0 15.1 90 116-209 37-127 (295)
252 3bt7_A TRNA (uracil-5-)-methyl 99.3 4.1E-12 1.4E-16 119.3 10.3 112 115-235 200-328 (369)
253 2xyq_A Putative 2'-O-methyl tr 99.3 1.1E-11 3.8E-16 111.8 12.3 97 125-236 59-174 (290)
254 2cmg_A Spermidine synthase; tr 99.3 2.1E-12 7E-17 115.4 7.3 99 128-235 71-173 (262)
255 3opn_A Putative hemolysin; str 99.3 3.8E-13 1.3E-17 118.1 2.4 109 117-233 24-137 (232)
256 2dul_A N(2),N(2)-dimethylguano 99.3 7.9E-12 2.7E-16 117.4 11.0 101 129-233 47-164 (378)
257 1qam_A ERMC' methyltransferase 99.3 2E-11 6.9E-16 108.0 12.2 88 116-208 17-106 (244)
258 2p41_A Type II methyltransfera 99.3 1.4E-12 4.9E-17 119.0 4.9 113 118-236 71-194 (305)
259 2b9e_A NOL1/NOP2/SUN domain fa 99.3 2.9E-11 1E-15 110.4 13.5 112 124-236 97-237 (309)
260 3axs_A Probable N(2),N(2)-dime 99.3 8.5E-12 2.9E-16 117.2 8.5 102 128-233 51-158 (392)
261 3fut_A Dimethyladenosine trans 99.2 4.6E-11 1.6E-15 106.9 11.3 87 117-209 35-123 (271)
262 1m6y_A S-adenosyl-methyltransf 99.2 2.9E-11 9.8E-16 109.9 8.8 89 118-207 15-109 (301)
263 3tqs_A Ribosomal RNA small sub 99.2 5E-11 1.7E-15 105.9 9.5 86 117-207 17-107 (255)
264 3v97_A Ribosomal RNA large sub 99.2 1.3E-10 4.6E-15 117.4 13.7 121 117-237 178-351 (703)
265 2qfm_A Spermine synthase; sper 99.2 3.6E-11 1.2E-15 110.8 7.8 108 128-236 187-317 (364)
266 2ar0_A M.ecoki, type I restric 99.2 3E-11 1E-15 118.7 7.3 118 119-236 159-315 (541)
267 2r6z_A UPF0341 protein in RSP 99.1 9.1E-11 3.1E-15 104.5 7.6 81 126-208 80-173 (258)
268 3uzu_A Ribosomal RNA small sub 99.1 3.7E-10 1.3E-14 101.6 9.3 87 117-207 30-125 (279)
269 3ftd_A Dimethyladenosine trans 99.1 8.7E-10 3E-14 97.6 11.6 88 116-208 18-107 (249)
270 3lkd_A Type I restriction-modi 99.0 3.8E-09 1.3E-13 103.5 16.3 109 128-236 220-361 (542)
271 3khk_A Type I restriction-modi 99.0 3.7E-10 1.3E-14 110.8 9.1 119 117-236 233-398 (544)
272 3ll7_A Putative methyltransfer 99.0 3E-10 1E-14 106.9 8.0 78 129-208 93-175 (410)
273 3s1s_A Restriction endonucleas 99.0 2.1E-09 7E-14 107.7 11.9 110 128-237 320-469 (878)
274 2oyr_A UPF0341 protein YHIQ; a 99.0 3.2E-10 1.1E-14 100.6 5.0 103 121-226 78-193 (258)
275 1qyr_A KSGA, high level kasuga 99.0 5.4E-10 1.8E-14 99.0 5.6 87 117-207 9-101 (252)
276 4gqb_A Protein arginine N-meth 98.9 4.4E-09 1.5E-13 104.0 11.9 127 103-230 327-464 (637)
277 1wg8_A Predicted S-adenosylmet 98.9 4.8E-09 1.6E-13 92.9 9.8 83 117-205 10-98 (285)
278 3cvo_A Methyltransferase-like 98.9 2.1E-08 7E-13 85.3 13.0 97 129-233 30-154 (202)
279 3o4f_A Spermidine synthase; am 98.9 9.3E-09 3.2E-13 92.3 10.9 109 128-236 82-201 (294)
280 3ua3_A Protein arginine N-meth 98.8 1.1E-08 3.6E-13 101.1 10.9 118 112-230 391-531 (745)
281 4fzv_A Putative methyltransfer 98.8 1.6E-08 5.4E-13 93.8 10.7 113 124-236 143-287 (359)
282 3evf_A RNA-directed RNA polyme 98.8 3.2E-09 1.1E-13 93.5 5.6 117 117-235 62-186 (277)
283 3b5i_A S-adenosyl-L-methionine 98.7 7E-08 2.4E-12 89.9 11.8 125 115-239 33-231 (374)
284 3ufb_A Type I restriction-modi 98.7 1.7E-07 5.7E-12 91.8 12.8 121 116-236 204-365 (530)
285 3gcz_A Polyprotein; flavivirus 98.7 1.3E-08 4.4E-13 89.8 4.2 116 117-235 78-203 (282)
286 3tka_A Ribosomal RNA small sub 98.6 8.3E-08 2.8E-12 86.9 9.1 86 117-206 45-138 (347)
287 2k4m_A TR8_protein, UPF0146 pr 98.6 1.7E-07 5.8E-12 74.3 8.8 98 117-238 25-126 (153)
288 2efj_A 3,7-dimethylxanthine me 98.5 2.1E-07 7.1E-12 86.8 8.1 107 130-239 53-231 (384)
289 2wk1_A NOVP; transferase, O-me 98.5 4.3E-07 1.5E-11 81.3 9.7 118 115-234 91-245 (282)
290 2qy6_A UPF0209 protein YFCK; s 98.5 2.4E-07 8.3E-12 82.1 7.0 104 128-231 59-211 (257)
291 3c6k_A Spermine synthase; sper 98.4 6.2E-07 2.1E-11 83.0 7.3 106 128-234 204-332 (381)
292 1m6e_X S-adenosyl-L-methionnin 98.3 6.8E-07 2.3E-11 82.7 6.0 111 129-239 51-215 (359)
293 3eld_A Methyltransferase; flav 98.3 7.7E-07 2.6E-11 78.9 5.9 116 117-235 69-193 (300)
294 3p8z_A Mtase, non-structural p 98.2 1.1E-06 3.7E-11 75.1 5.2 120 116-238 65-191 (267)
295 3lkz_A Non-structural protein 98.2 6E-06 2.1E-10 72.9 10.0 118 116-236 81-207 (321)
296 4auk_A Ribosomal RNA large sub 98.2 4.4E-06 1.5E-10 76.9 9.3 87 127-226 209-296 (375)
297 2px2_A Genome polyprotein [con 98.1 1.7E-06 5.8E-11 75.1 4.3 117 116-235 60-185 (269)
298 2zig_A TTHA0409, putative modi 98.1 1.4E-05 4.9E-10 72.3 9.5 58 116-176 223-280 (297)
299 2oo3_A Protein involved in cat 97.8 7.3E-06 2.5E-10 72.7 3.2 103 129-235 91-200 (283)
300 3r24_A NSP16, 2'-O-methyl tran 97.8 0.00014 4.6E-09 64.2 9.9 108 117-238 92-222 (344)
301 1i4w_A Mitochondrial replicati 97.7 7.2E-05 2.5E-09 69.0 8.4 73 116-191 39-117 (353)
302 1g60_A Adenine-specific methyl 97.6 0.00014 4.6E-09 64.5 7.8 59 116-177 200-258 (260)
303 2vz8_A Fatty acid synthase; tr 97.3 8.3E-05 2.8E-09 84.8 2.7 104 129-235 1240-1350(2512)
304 1rjd_A PPM1P, carboxy methyl t 97.1 0.012 4.2E-07 53.7 14.5 104 129-234 97-233 (334)
305 3g7u_A Cytosine-specific methy 96.9 0.0056 1.9E-07 57.0 10.7 72 131-209 3-84 (376)
306 1g55_A DNA cytosine methyltran 96.9 0.0014 4.9E-08 60.3 6.3 75 130-209 2-81 (343)
307 2c7p_A Modification methylase 96.8 0.0029 1E-07 57.7 7.9 71 130-209 11-84 (327)
308 2py6_A Methyltransferase FKBM; 96.6 0.0058 2E-07 57.6 8.9 64 127-190 224-293 (409)
309 2dph_A Formaldehyde dismutase; 96.6 0.008 2.7E-07 56.3 9.4 102 123-232 179-298 (398)
310 1f8f_A Benzyl alcohol dehydrog 96.5 0.012 4.1E-07 54.5 10.4 99 121-232 182-288 (371)
311 3two_A Mannitol dehydrogenase; 96.5 0.0056 1.9E-07 56.2 7.9 95 122-232 169-264 (348)
312 1kol_A Formaldehyde dehydrogen 96.5 0.016 5.4E-07 54.2 11.1 102 123-232 179-299 (398)
313 2uyo_A Hypothetical protein ML 96.5 0.03 1E-06 50.6 12.3 103 130-236 103-221 (310)
314 3s2e_A Zinc-containing alcohol 96.5 0.016 5.3E-07 53.0 10.6 96 122-232 159-262 (340)
315 1pl8_A Human sorbitol dehydrog 96.5 0.018 6.2E-07 53.0 11.0 97 123-232 165-272 (356)
316 3tos_A CALS11; methyltransfera 96.4 0.016 5.4E-07 50.8 9.4 106 130-237 70-221 (257)
317 4ej6_A Putative zinc-binding d 96.2 0.04 1.4E-06 51.0 11.8 96 123-233 176-284 (370)
318 1e3j_A NADP(H)-dependent ketos 96.2 0.024 8.2E-07 52.1 10.2 97 123-232 162-270 (352)
319 1boo_A Protein (N-4 cytosine-s 96.2 0.00095 3.3E-08 60.9 0.4 59 117-178 241-299 (323)
320 3m6i_A L-arabinitol 4-dehydrog 96.2 0.017 5.8E-07 53.3 8.9 100 123-233 173-283 (363)
321 1pqw_A Polyketide synthase; ro 96.1 0.041 1.4E-06 45.8 10.5 94 123-232 32-136 (198)
322 3ubt_Y Modification methylase 96.1 0.029 1E-06 51.0 10.2 71 131-209 1-74 (331)
323 2qrv_A DNA (cytosine-5)-methyl 96.1 0.018 6.1E-07 51.6 8.4 75 128-209 14-96 (295)
324 2zig_A TTHA0409, putative modi 95.9 0.0044 1.5E-07 55.7 3.4 57 179-235 20-99 (297)
325 1eg2_A Modification methylase 95.9 0.016 5.5E-07 52.6 7.1 58 117-177 231-291 (319)
326 3goh_A Alcohol dehydrogenase, 95.8 0.021 7.1E-07 51.6 7.7 92 123-232 136-228 (315)
327 3gms_A Putative NADPH:quinone 95.8 0.03 1E-06 51.1 8.9 98 120-233 135-243 (340)
328 1rjw_A ADH-HT, alcohol dehydro 95.8 0.093 3.2E-06 47.8 12.2 95 123-232 158-260 (339)
329 1cdo_A Alcohol dehydrogenase; 95.8 0.025 8.4E-07 52.5 8.3 96 122-232 185-293 (374)
330 3fpc_A NADP-dependent alcohol 95.7 0.031 1E-06 51.3 8.6 100 122-234 159-267 (352)
331 1uuf_A YAHK, zinc-type alcohol 95.7 0.0092 3.2E-07 55.3 5.1 96 122-232 187-287 (369)
332 3jv7_A ADH-A; dehydrogenase, n 95.7 0.022 7.4E-07 52.2 7.4 95 126-233 168-270 (345)
333 1p0f_A NADP-dependent alcohol 95.7 0.025 8.4E-07 52.4 7.7 100 121-233 183-293 (373)
334 1v3u_A Leukotriene B4 12- hydr 95.6 0.045 1.5E-06 49.7 9.2 96 121-232 137-243 (333)
335 1e3i_A Alcohol dehydrogenase, 95.6 0.032 1.1E-06 51.7 8.2 97 122-233 188-297 (376)
336 3uog_A Alcohol dehydrogenase; 95.6 0.034 1.2E-06 51.3 8.3 98 123-234 183-288 (363)
337 2h6e_A ADH-4, D-arabinose 1-de 95.6 0.031 1.1E-06 51.1 8.0 94 126-232 168-268 (344)
338 3qv2_A 5-cytosine DNA methyltr 95.5 0.025 8.7E-07 51.4 7.0 75 129-209 9-89 (327)
339 4h0n_A DNMT2; SAH binding, tra 95.5 0.025 8.5E-07 51.7 6.9 74 131-209 4-82 (333)
340 2fzw_A Alcohol dehydrogenase c 95.5 0.051 1.7E-06 50.2 9.2 97 122-233 183-292 (373)
341 2jhf_A Alcohol dehydrogenase E 95.5 0.054 1.8E-06 50.1 9.3 96 122-232 184-292 (374)
342 1zkd_A DUF185; NESG, RPR58, st 95.5 0.1 3.5E-06 48.4 10.9 81 124-209 75-162 (387)
343 4b7c_A Probable oxidoreductase 95.4 0.049 1.7E-06 49.5 8.7 101 118-233 138-248 (336)
344 2j3h_A NADP-dependent oxidored 95.3 0.058 2E-06 49.2 9.0 97 121-232 147-254 (345)
345 3vyw_A MNMC2; tRNA wobble urid 95.3 0.04 1.4E-06 49.4 7.5 123 108-231 73-224 (308)
346 4dvj_A Putative zinc-dependent 95.3 0.027 9.2E-07 52.0 6.5 96 123-232 160-269 (363)
347 3uko_A Alcohol dehydrogenase c 95.2 0.025 8.7E-07 52.5 6.0 100 121-233 185-295 (378)
348 3fbg_A Putative arginate lyase 95.1 0.04 1.4E-06 50.5 7.1 97 121-232 136-247 (346)
349 2c0c_A Zinc binding alcohol de 95.1 0.18 6.2E-06 46.4 11.5 97 123-233 157-261 (362)
350 2hcy_A Alcohol dehydrogenase 1 95.0 0.059 2E-06 49.3 8.0 97 122-233 162-269 (347)
351 3qwb_A Probable quinone oxidor 95.0 0.19 6.6E-06 45.5 11.4 95 125-233 144-247 (334)
352 4eye_A Probable oxidoreductase 94.9 0.026 9E-07 51.6 5.3 96 123-233 153-257 (342)
353 1jvb_A NAD(H)-dependent alcoho 94.9 0.12 4.2E-06 47.1 9.8 96 123-232 164-270 (347)
354 2b5w_A Glucose dehydrogenase; 94.9 0.06 2.1E-06 49.5 7.7 95 123-233 160-273 (357)
355 4eez_A Alcohol dehydrogenase 1 94.9 0.045 1.5E-06 50.0 6.7 102 122-233 156-263 (348)
356 1qor_A Quinone oxidoreductase; 94.8 0.17 5.7E-06 45.8 10.3 94 124-233 135-239 (327)
357 4dup_A Quinone oxidoreductase; 94.7 0.15 5.2E-06 46.7 9.9 95 123-233 161-265 (353)
358 2d8a_A PH0655, probable L-thre 94.7 0.15 5E-06 46.6 9.7 95 123-233 162-267 (348)
359 1yb5_A Quinone oxidoreductase; 94.6 0.28 9.6E-06 44.9 11.4 95 123-233 164-269 (351)
360 1vj0_A Alcohol dehydrogenase, 94.6 0.094 3.2E-06 48.6 8.2 97 123-232 188-297 (380)
361 3jyn_A Quinone oxidoreductase; 94.5 0.2 6.9E-06 45.2 10.1 97 123-233 134-239 (325)
362 3ip1_A Alcohol dehydrogenase, 94.4 0.3 1E-05 45.6 11.3 100 126-233 210-318 (404)
363 1piw_A Hypothetical zinc-type 94.4 0.069 2.4E-06 49.1 6.8 100 123-233 173-276 (360)
364 2eih_A Alcohol dehydrogenase; 94.4 0.19 6.4E-06 45.8 9.6 92 125-232 162-264 (343)
365 1wly_A CAAR, 2-haloacrylate re 94.4 0.36 1.2E-05 43.6 11.4 94 124-233 140-244 (333)
366 3nx4_A Putative oxidoreductase 94.3 0.14 4.6E-06 46.3 8.4 98 123-233 139-241 (324)
367 3gaz_A Alcohol dehydrogenase s 94.3 0.18 6E-06 46.0 9.2 93 123-232 144-245 (343)
368 4a2c_A Galactitol-1-phosphate 94.2 0.7 2.4E-05 41.9 13.2 101 121-233 152-260 (346)
369 2zb4_A Prostaglandin reductase 94.1 0.28 9.7E-06 44.8 10.3 97 121-232 150-259 (357)
370 1boo_A Protein (N-4 cytosine-s 94.1 0.031 1.1E-06 50.8 3.6 57 180-236 14-87 (323)
371 4fs3_A Enoyl-[acyl-carrier-pro 94.0 0.54 1.9E-05 40.8 11.5 76 129-206 5-96 (256)
372 2j8z_A Quinone oxidoreductase; 93.9 0.46 1.6E-05 43.4 11.3 95 123-233 156-261 (354)
373 3fwz_A Inner membrane protein 93.8 0.27 9.3E-06 38.3 8.2 92 130-233 7-105 (140)
374 2dq4_A L-threonine 3-dehydroge 93.7 0.014 4.6E-07 53.5 0.5 92 124-232 160-261 (343)
375 2cdc_A Glucose dehydrogenase g 93.7 0.19 6.5E-06 46.2 8.2 87 130-233 181-278 (366)
376 3me5_A Cytosine-specific methy 93.6 0.063 2.1E-06 51.5 4.8 76 130-209 88-182 (482)
377 1iz0_A Quinone oxidoreductase; 93.5 0.19 6.5E-06 44.8 7.7 89 127-232 123-217 (302)
378 3o26_A Salutaridine reductase; 93.5 0.85 2.9E-05 40.3 12.0 77 129-206 11-101 (311)
379 4dcm_A Ribosomal RNA large sub 93.4 0.4 1.4E-05 44.4 10.0 99 129-235 38-138 (375)
380 3oig_A Enoyl-[acyl-carrier-pro 93.3 1.2 4E-05 38.6 12.4 104 129-234 6-148 (266)
381 3tjr_A Short chain dehydrogena 93.2 0.79 2.7E-05 40.8 11.4 76 129-206 30-118 (301)
382 3tqh_A Quinone oxidoreductase; 93.2 0.54 1.8E-05 42.2 10.3 93 123-232 146-244 (321)
383 3krt_A Crotonyl COA reductase; 93.2 0.48 1.6E-05 45.0 10.4 94 125-232 224-343 (456)
384 1yqd_A Sinapyl alcohol dehydro 93.1 0.19 6.4E-06 46.3 7.2 98 122-233 179-282 (366)
385 1wma_A Carbonyl reductase [NAD 93.1 0.51 1.7E-05 40.8 9.8 103 129-233 3-138 (276)
386 3pxx_A Carveol dehydrogenase; 93.1 1 3.6E-05 39.4 11.9 102 129-233 9-153 (287)
387 3ucx_A Short chain dehydrogena 93.0 1 3.4E-05 39.1 11.4 74 129-205 10-97 (264)
388 4f3n_A Uncharacterized ACR, CO 92.9 0.28 9.7E-06 46.0 8.1 46 130-175 138-188 (432)
389 3grk_A Enoyl-(acyl-carrier-pro 92.9 1.9 6.4E-05 38.1 13.2 102 129-234 30-170 (293)
390 3llv_A Exopolyphosphatase-rela 92.7 0.74 2.5E-05 35.6 9.3 91 130-233 6-103 (141)
391 4g81_D Putative hexonate dehyd 92.7 0.76 2.6E-05 40.0 10.1 75 129-206 8-96 (255)
392 1pjc_A Protein (L-alanine dehy 92.7 0.11 3.9E-06 47.8 5.0 99 130-233 167-267 (361)
393 3o38_A Short chain dehydrogena 92.7 1.1 3.7E-05 38.8 11.3 76 129-206 21-111 (266)
394 1xa0_A Putative NADPH dependen 92.6 0.078 2.7E-06 48.0 3.7 97 123-232 142-245 (328)
395 2cf5_A Atccad5, CAD, cinnamyl 92.3 0.17 5.8E-06 46.4 5.7 99 122-232 172-274 (357)
396 4eso_A Putative oxidoreductase 92.3 0.73 2.5E-05 39.9 9.6 101 129-234 7-139 (255)
397 3k31_A Enoyl-(acyl-carrier-pro 92.2 1.1 3.9E-05 39.6 10.9 102 129-234 29-169 (296)
398 3iht_A S-adenosyl-L-methionine 92.2 0.38 1.3E-05 38.2 6.6 48 113-161 25-72 (174)
399 3is3_A 17BETA-hydroxysteroid d 92.2 1.6 5.4E-05 38.0 11.6 104 129-234 17-153 (270)
400 2eez_A Alanine dehydrogenase; 92.1 0.15 5.2E-06 47.1 5.1 100 129-233 165-266 (369)
401 4da9_A Short-chain dehydrogena 92.1 2 6.9E-05 37.6 12.3 75 129-206 28-117 (280)
402 2vhw_A Alanine dehydrogenase; 92.0 0.11 3.9E-06 48.1 4.1 100 129-233 167-268 (377)
403 1tt7_A YHFP; alcohol dehydroge 91.9 0.21 7.3E-06 45.1 5.8 96 124-232 144-246 (330)
404 3v2g_A 3-oxoacyl-[acyl-carrier 91.8 2.4 8.2E-05 36.9 12.4 103 129-234 30-166 (271)
405 4a0s_A Octenoyl-COA reductase/ 91.5 0.63 2.2E-05 43.9 8.9 96 125-233 216-336 (447)
406 3pvc_A TRNA 5-methylaminomethy 91.4 0.16 5.5E-06 51.0 4.8 103 129-231 58-209 (689)
407 1lss_A TRK system potassium up 91.3 2.4 8.3E-05 32.2 10.8 90 130-231 4-100 (140)
408 1ja9_A 4HNR, 1,3,6,8-tetrahydr 91.3 1.4 4.9E-05 38.0 10.4 76 129-206 20-109 (274)
409 3edm_A Short chain dehydrogena 91.3 1.1 3.6E-05 38.9 9.5 102 129-233 7-143 (259)
410 1zsy_A Mitochondrial 2-enoyl t 91.3 1.2 4.1E-05 40.6 10.3 98 124-232 162-269 (357)
411 3ijr_A Oxidoreductase, short c 91.3 1.9 6.3E-05 38.1 11.2 103 129-233 46-182 (291)
412 3lf2_A Short chain oxidoreduct 91.2 3.1 0.00011 35.9 12.5 76 129-206 7-97 (265)
413 3p2y_A Alanine dehydrogenase/p 91.2 0.1 3.6E-06 48.2 2.9 95 129-231 183-300 (381)
414 3r1i_A Short-chain type dehydr 91.1 1.5 5E-05 38.4 10.2 76 129-206 31-119 (276)
415 3r3s_A Oxidoreductase; structu 91.0 1.6 5.6E-05 38.5 10.6 104 129-234 48-186 (294)
416 3ius_A Uncharacterized conserv 91.0 2.7 9.3E-05 36.5 12.0 68 131-208 6-75 (286)
417 1g60_A Adenine-specific methyl 90.9 0.097 3.3E-06 45.8 2.3 53 181-233 5-74 (260)
418 1zem_A Xylitol dehydrogenase; 90.9 2 6.8E-05 37.1 10.9 76 129-206 6-94 (262)
419 4fgs_A Probable dehydrogenase 90.9 1.5 5E-05 38.6 9.9 99 129-233 28-159 (273)
420 4egf_A L-xylulose reductase; s 90.8 2.4 8.2E-05 36.7 11.3 76 129-206 19-108 (266)
421 4dio_A NAD(P) transhydrogenase 90.7 0.17 5.9E-06 47.2 3.8 42 129-171 189-231 (405)
422 3u5t_A 3-oxoacyl-[acyl-carrier 90.6 2.3 7.7E-05 37.0 11.0 102 129-233 26-161 (267)
423 3ek2_A Enoyl-(acyl-carrier-pro 90.6 1.3 4.3E-05 38.3 9.3 105 128-234 12-154 (271)
424 3ce6_A Adenosylhomocysteinase; 90.5 0.95 3.3E-05 43.4 9.0 90 127-233 271-361 (494)
425 3pgx_A Carveol dehydrogenase; 90.5 2.4 8.2E-05 37.0 11.1 75 129-206 14-115 (280)
426 3ioy_A Short-chain dehydrogena 90.4 2.6 9E-05 37.6 11.5 77 129-206 7-97 (319)
427 3ftp_A 3-oxoacyl-[acyl-carrier 90.3 2 6.9E-05 37.4 10.4 76 129-206 27-115 (270)
428 3tsc_A Putative oxidoreductase 90.3 3.2 0.00011 36.1 11.7 75 129-206 10-111 (277)
429 1l7d_A Nicotinamide nucleotide 90.2 0.22 7.5E-06 46.3 4.2 41 129-170 171-212 (384)
430 3e8x_A Putative NAD-dependent 90.2 1.7 6E-05 36.6 9.7 71 129-207 20-95 (236)
431 3ps9_A TRNA 5-methylaminomethy 90.1 0.36 1.2E-05 48.3 6.0 104 129-232 66-218 (676)
432 4imr_A 3-oxoacyl-(acyl-carrier 90.1 2 6.8E-05 37.5 10.2 76 129-206 32-119 (275)
433 1eg2_A Modification methylase 90.1 0.17 5.7E-06 45.9 3.1 57 180-236 38-109 (319)
434 3swr_A DNA (cytosine-5)-methyl 90.1 0.66 2.3E-05 48.3 7.9 74 129-209 539-631 (1002)
435 4fn4_A Short chain dehydrogena 90.0 1.3 4.6E-05 38.4 8.8 74 129-205 6-93 (254)
436 3gqv_A Enoyl reductase; medium 89.8 4 0.00014 37.3 12.5 92 128-233 163-263 (371)
437 3uve_A Carveol dehydrogenase ( 89.8 2.9 9.8E-05 36.6 11.1 75 129-206 10-114 (286)
438 3f1l_A Uncharacterized oxidore 89.8 3.8 0.00013 35.0 11.7 77 129-206 11-102 (252)
439 1x13_A NAD(P) transhydrogenase 89.7 0.22 7.6E-06 46.6 3.8 40 129-169 171-211 (401)
440 3oec_A Carveol dehydrogenase ( 89.5 3.3 0.00011 37.0 11.4 76 129-206 45-145 (317)
441 3sx2_A Putative 3-ketoacyl-(ac 89.4 2.4 8.4E-05 36.8 10.3 77 129-207 12-113 (278)
442 3svt_A Short-chain type dehydr 89.3 3.6 0.00012 35.8 11.3 77 129-206 10-101 (281)
443 3tox_A Short chain dehydrogena 89.3 1.3 4.5E-05 38.9 8.4 76 129-206 7-95 (280)
444 1xg5_A ARPG836; short chain de 89.3 4.7 0.00016 35.0 12.0 77 129-206 31-121 (279)
445 1geg_A Acetoin reductase; SDR 89.3 3.8 0.00013 35.1 11.3 75 130-206 2-89 (256)
446 1gu7_A Enoyl-[acyl-carrier-pro 89.2 0.56 1.9E-05 42.9 6.1 98 125-232 162-274 (364)
447 3h2s_A Putative NADH-flavin re 89.2 2.9 0.0001 34.7 10.3 93 132-232 2-103 (224)
448 1y1p_A ARII, aldehyde reductas 89.1 5.2 0.00018 35.5 12.5 78 129-207 10-94 (342)
449 3oid_A Enoyl-[acyl-carrier-pro 89.1 4.1 0.00014 35.0 11.4 75 129-205 3-91 (258)
450 2vn8_A Reticulon-4-interacting 89.1 1.4 5E-05 40.3 8.9 91 127-232 181-279 (375)
451 3i1j_A Oxidoreductase, short c 89.0 5.1 0.00018 33.9 11.9 77 129-206 13-104 (247)
452 3ggo_A Prephenate dehydrogenas 88.9 2.6 8.9E-05 37.7 10.2 88 130-230 33-125 (314)
453 3ic5_A Putative saccharopine d 88.8 1.9 6.5E-05 31.6 8.0 69 130-207 5-80 (118)
454 3qiv_A Short-chain dehydrogena 88.7 1.7 5.8E-05 37.2 8.6 76 129-206 8-96 (253)
455 1id1_A Putative potassium chan 88.7 2.8 9.5E-05 32.8 9.2 95 130-233 3-105 (153)
456 3l77_A Short-chain alcohol deh 88.5 4.1 0.00014 34.2 10.8 75 130-206 2-90 (235)
457 3t4x_A Oxidoreductase, short c 88.4 3.7 0.00012 35.5 10.6 77 129-206 9-95 (267)
458 1g0o_A Trihydroxynaphthalene r 88.3 4.7 0.00016 35.1 11.3 104 129-234 28-164 (283)
459 1fmc_A 7 alpha-hydroxysteroid 88.2 1.6 5.6E-05 37.2 8.1 76 129-206 10-98 (255)
460 3gvc_A Oxidoreductase, probabl 88.1 4.4 0.00015 35.4 11.0 72 129-206 28-113 (277)
461 2hwk_A Helicase NSP2; rossman 88.1 0.48 1.6E-05 41.6 4.4 53 185-237 195-258 (320)
462 1ae1_A Tropinone reductase-I; 88.0 2.4 8.2E-05 36.8 9.2 76 129-206 20-109 (273)
463 3ew7_A LMO0794 protein; Q8Y8U8 87.9 3.9 0.00014 33.7 10.2 92 132-232 2-101 (221)
464 3ado_A Lambda-crystallin; L-gu 87.9 1.1 3.9E-05 40.3 7.0 101 130-236 6-126 (319)
465 3l9w_A Glutathione-regulated p 87.9 1.8 6E-05 40.5 8.6 95 130-236 4-105 (413)
466 4e6p_A Probable sorbitol dehyd 87.9 3 0.0001 35.8 9.7 73 129-206 7-92 (259)
467 2g1u_A Hypothetical protein TM 87.7 1.8 6.1E-05 34.1 7.5 94 128-232 17-117 (155)
468 1xhl_A Short-chain dehydrogena 87.7 4.5 0.00015 35.6 10.9 77 129-206 25-116 (297)
469 3l4b_C TRKA K+ channel protien 87.6 1.8 6.2E-05 36.2 7.9 91 132-233 2-99 (218)
470 3ksu_A 3-oxoacyl-acyl carrier 87.5 2.2 7.4E-05 36.9 8.5 103 129-233 10-147 (262)
471 4dmm_A 3-oxoacyl-[acyl-carrier 87.5 4.9 0.00017 34.8 10.9 76 129-206 27-116 (269)
472 2jah_A Clavulanic acid dehydro 87.2 2.7 9.2E-05 35.9 8.9 76 129-206 6-94 (247)
473 2ae2_A Protein (tropinone redu 87.0 2.7 9.1E-05 36.2 8.8 76 129-206 8-97 (260)
474 1zcj_A Peroxisomal bifunctiona 87.0 8.9 0.0003 36.3 13.1 95 130-231 37-148 (463)
475 2gdz_A NAD+-dependent 15-hydro 86.9 4.5 0.00015 34.8 10.3 78 129-207 6-97 (267)
476 1spx_A Short-chain reductase f 86.8 2.1 7.3E-05 37.2 8.1 77 129-206 5-96 (278)
477 2x9g_A PTR1, pteridine reducta 86.7 4.5 0.00015 35.3 10.3 75 129-206 22-116 (288)
478 1gee_A Glucose 1-dehydrogenase 86.6 5 0.00017 34.2 10.4 76 129-206 6-95 (261)
479 3d4o_A Dipicolinate synthase s 86.4 2.9 0.0001 36.9 8.9 87 129-231 154-242 (293)
480 3osu_A 3-oxoacyl-[acyl-carrier 86.3 6 0.00021 33.6 10.7 75 130-206 4-92 (246)
481 4ft4_B DNA (cytosine-5)-methyl 86.2 1.5 5.1E-05 44.6 7.7 45 129-173 211-260 (784)
482 2i6t_A Ubiquitin-conjugating e 86.0 5.8 0.0002 35.3 10.6 98 129-232 13-124 (303)
483 2a4k_A 3-oxoacyl-[acyl carrier 85.7 7.4 0.00025 33.5 11.0 73 129-206 5-90 (263)
484 4a27_A Synaptic vesicle membra 85.7 0.35 1.2E-05 44.1 2.4 96 122-233 135-238 (349)
485 3sc4_A Short chain dehydrogena 85.7 3.7 0.00013 35.9 9.1 76 129-206 8-103 (285)
486 4dkj_A Cytosine-specific methy 85.7 1.1 3.7E-05 41.8 5.8 46 130-175 10-60 (403)
487 3f9i_A 3-oxoacyl-[acyl-carrier 85.4 5.2 0.00018 33.9 9.8 74 128-206 12-94 (249)
488 2bd0_A Sepiapterin reductase; 85.3 6.7 0.00023 33.0 10.4 75 130-206 2-96 (244)
489 2dpo_A L-gulonate 3-dehydrogen 85.3 3.5 0.00012 37.0 8.8 95 131-231 7-121 (319)
490 3h7a_A Short chain dehydrogena 85.2 2.4 8.3E-05 36.4 7.5 75 129-206 6-93 (252)
491 4e3z_A Putative oxidoreductase 84.9 7.8 0.00027 33.4 10.8 76 129-206 25-114 (272)
492 3ai3_A NADPH-sorbose reductase 84.9 4 0.00014 35.1 8.8 76 129-206 6-95 (263)
493 3c85_A Putative glutathione-re 84.8 4.7 0.00016 32.5 8.8 91 130-232 39-138 (183)
494 3zwc_A Peroxisomal bifunctiona 84.7 14 0.00046 37.3 13.6 101 131-236 317-432 (742)
495 3av4_A DNA (cytosine-5)-methyl 84.5 1.8 6.1E-05 46.5 7.4 74 129-209 850-942 (1330)
496 2h7i_A Enoyl-[acyl-carrier-pro 84.5 2.2 7.5E-05 37.0 7.0 74 129-206 6-97 (269)
497 2rir_A Dipicolinate synthase, 84.3 3.7 0.00013 36.3 8.6 87 129-231 156-244 (300)
498 3gaf_A 7-alpha-hydroxysteroid 84.2 4.1 0.00014 35.0 8.6 75 129-206 11-99 (256)
499 3iei_A Leucine carboxyl methyl 84.2 23 0.0008 31.8 16.1 105 129-234 90-231 (334)
500 3e03_A Short chain dehydrogena 84.2 6.6 0.00023 34.0 10.0 75 129-206 5-100 (274)
No 1
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=100.00 E-value=1.7e-36 Score=278.72 Aligned_cols=265 Identities=25% Similarity=0.420 Sum_probs=228.6
Q ss_pred hhhhhhcCCChHHHHHhhcCCCCccccccCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCc
Q 018346 75 KAKEQHYELPTSFFKLVLGKYFKYSCCYFSDASKTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNC 154 (357)
Q Consensus 75 ~~~~~~y~~~~~~~~~~l~~~~~y~~~~f~~~~~~l~~~~~~~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~ 154 (357)
+.+..|||..+++|+.++++.+.|++++|..+..++.+++...+..+++.+.+.++.+|||||||+|.++..+++.++ +
T Consensus 18 ~~i~~~Yd~~~~~y~~~l~~~~~y~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~ 96 (302)
T 3hem_A 18 EAVRSHYDKSNEFFKLWLDPSMTYSCAYFERPDMTLEEAQYAKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD-V 96 (302)
T ss_dssp HHHHHHHTSCHHHHHHHSCTTCCCSCCCCSSTTCCHHHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC-C
T ss_pred HHHHHhcCCCHHHHHHhcCCCCceeeEEecCCCCCHHHHHHHHHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC-C
Confidence 345789999999999999999999999999989999999999999999999889999999999999999999999874 8
Q ss_pred EEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCccccCccEEEEcccccchhh---------HHHHHHHHHHhcc
Q 018346 155 KITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEMEASYDRIYSIEMFEHMKN---------YQNLLKKISKWMK 224 (357)
Q Consensus 155 ~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~fD~Ii~~~~~~~~~~---------~~~~l~~~~~~Lk 224 (357)
+|+|+|+|+.+++.|++++...+++ +++++.+|+.++ .++||+|+++.+++|+++ ...+++++.++||
T Consensus 97 ~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~Lk 174 (302)
T 3hem_A 97 NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF--DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTP 174 (302)
T ss_dssp EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC--CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSC
T ss_pred EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc--CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcC
Confidence 9999999999999999999998885 899999999876 578999999999999944 4899999999999
Q ss_pred cCceEEEEeccCCCCCcccccC--------CccchhhhcccCCCCCCCHHHHHhhc--CCcEEEEeEEecCccHHHHHHH
Q 018346 225 EDTLLFVHHFCHKTFAYHFEDT--------NDDDWITKYFFTGGTMPSANLLLYFQ--DDVSVVDHWLVNGKHYAQTSEE 294 (357)
Q Consensus 225 pgG~l~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~p~~~~~~~~~--~~~~~~~~w~~~g~~y~~tl~~ 294 (357)
|||++++.+++........... ....|+.++++|++.+|+...+.... .++.+++. ...+.+|.+|+..
T Consensus 175 pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~s~~~~~~~l~~aGf~~~~~-~~~~~~y~~tl~~ 253 (302)
T 3hem_A 175 DDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPGGRLPRISQVDYYSSNAGWKVERY-HRIGANYVPTLNA 253 (302)
T ss_dssp TTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTTCCCCCHHHHHHHHHHHTCEEEEE-EECGGGHHHHHHH
T ss_pred CCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCCCCCCCCHHHHHHHHHhCCcEEEEE-EeCchhHHHHHHH
Confidence 9999999988766432111000 01278999999999999887766654 35665554 5668999999999
Q ss_pred HHHHHHhcHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHhcCCCCceEEEEEEEEee
Q 018346 295 WLKRMDNNLASIKPIMESTYGKDQAVKWTVYWRTFFIAVAELFGYNNGEEWMVTHFLFRK 354 (357)
Q Consensus 295 w~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 354 (357)
|.+++.++..++.++ |++ .+++.|+.|+.+|+.+|+.|. .++.|++++|
T Consensus 254 w~~~~~~~~~~~~~~----~~~----~~~~~w~~yl~~~~~~f~~~~---~~~~q~~~~~ 302 (302)
T 3hem_A 254 WADALQAHKDEAIAL----KGQ----ETCDIYMHYLRGCSDLFRDKY---TDVCQFTLVK 302 (302)
T ss_dssp HHHHHHHTHHHHHHH----HCH----HHHHHHHHHHHHHHHHHHTTS---SEEEEEEEEC
T ss_pred HHHHHHHhHHHHHHH----hCH----HHHHHHHHHHHHHHHHHhCCC---CeEEEEEEEC
Confidence 999999998888775 554 688999999999999999999 6688999886
No 2
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=100.00 E-value=2.4e-33 Score=255.80 Aligned_cols=264 Identities=26% Similarity=0.456 Sum_probs=224.5
Q ss_pred hhhhhcCCChHHHHHhhcCCCCccccccCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcE
Q 018346 76 AKEQHYELPTSFFKLVLGKYFKYSCCYFSDASKTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCK 155 (357)
Q Consensus 76 ~~~~~y~~~~~~~~~~l~~~~~y~~~~f~~~~~~l~~~~~~~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~ 155 (357)
.+..|||..+++|+.++++.+.|++++|..+...+.+++...++.+++.+++.++.+|||||||+|..+..+++.. +.+
T Consensus 11 ~i~~~Yd~~~~~~~~~~~~~~~y~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~ 89 (287)
T 1kpg_A 11 NVQAHYDLSDDFFRLFLDPTQTYSCAYFERDDMTLQEAQIAKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKY-DVN 89 (287)
T ss_dssp HHHHHHTSCHHHHTTTSCTTCCCSCCCCSSTTCCHHHHHHHHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHH-CCE
T ss_pred HHHHhcCCCHHHHHHhcCCCCCcceEEecCCCCCHHHHHHHHHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHc-CCE
Confidence 4578999999999999999999999999988899999999999999999888899999999999999999999665 569
Q ss_pred EEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCccccCccEEEEcccccch--hhHHHHHHHHHHhcccCceEEEE
Q 018346 156 ITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEMEASYDRIYSIEMFEHM--KNYQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 156 v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~fD~Ii~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~~~ 232 (357)
|+|+|+|+.+++.+++++...++. +++++.+|+.+++ ++||+|++..+++|+ +++..+++++.++|||||.+++.
T Consensus 90 v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 167 (287)
T 1kpg_A 90 VVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD--EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLH 167 (287)
T ss_dssp EEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC--CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEE
T ss_pred EEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC--CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEE
Confidence 999999999999999999887764 8999999998765 789999999999999 78999999999999999999999
Q ss_pred eccCCCCCcc--------cccCCccchhhhcccCCCCCCCHHHHHhhc--CCcEEEEeEEecCccHHHHHHHHHHHHHhc
Q 018346 233 HFCHKTFAYH--------FEDTNDDDWITKYFFTGGTMPSANLLLYFQ--DDVSVVDHWLVNGKHYAQTSEEWLKRMDNN 302 (357)
Q Consensus 233 ~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~--~~~~~~~~w~~~g~~y~~tl~~w~~~l~~~ 302 (357)
+++....... ........|+.++++|++.+++...+.... .++.+++ +...+.+|.+|+..|..++.++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~-~~~~~~~y~~~~~~w~~~~~~~ 246 (287)
T 1kpg_A 168 TITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSIPMVQECASANGFTVTR-VQSLQPHYAKTLDLWSAALQAN 246 (287)
T ss_dssp EEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHTTTCEEEE-EEECHHHHHHHHHHHHHHHHHT
T ss_pred EecCCCccccccccccccccccchhhhHHheeCCCCCCCCHHHHHHHHHhCCcEEEE-EEeCcHhHHHHHHHHHHHHHHH
Confidence 8876542210 000123457788899999998887776643 4666555 4566789999999999999988
Q ss_pred HHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHhcCCCCceEEEEEEEEee
Q 018346 303 LASIKPIMESTYGKDQAVKWTVYWRTFFIAVAELFGYNNGEEWMVTHFLFRK 354 (357)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 354 (357)
..++.+. +++ .+++.|+.|+.+|+++|+.|. +++.|++++|
T Consensus 247 ~~~~~~~----~~~----~~~~~~~~~l~~~~~~f~~g~---~~~~~~~~~k 287 (287)
T 1kpg_A 247 KGQAIAL----QSE----EVYERYMKYLTGCAEMFRIGY---IDVNQFTCQK 287 (287)
T ss_dssp HHHHHHH----SCH----HHHHHHHHHHHHHHHHHHTTS---EEEEEEEEEC
T ss_pred HHHHHHh----cCh----HHHHHHHHHHHHHHHHHhCCC---CeEEEEEEEC
Confidence 8777664 443 577889999999999999999 8899999987
No 3
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=100.00 E-value=1.4e-31 Score=247.67 Aligned_cols=265 Identities=23% Similarity=0.397 Sum_probs=224.3
Q ss_pred hhhhcCCChHHHHHhhcCCCCccccccCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEE
Q 018346 77 KEQHYELPTSFFKLVLGKYFKYSCCYFSDASKTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKI 156 (357)
Q Consensus 77 ~~~~y~~~~~~~~~~l~~~~~y~~~~f~~~~~~l~~~~~~~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v 156 (357)
+..+||..+++|+.++++.+.|++++|..+...+.+++...+..+++.+++.++.+|||||||+|.++..+++.+ +++|
T Consensus 38 i~~~Yd~~~~~~~~~~~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~-~~~v 116 (318)
T 2fk8_A 38 IQAHYDVSDDFFALFQDPTRTYSCAYFEPPELTLEEAQYAKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERF-DVNV 116 (318)
T ss_dssp CGGGGCCCHHHHTTTSCTTCCCSCCCCSSTTCCHHHHHHHHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHH-CCEE
T ss_pred HHHhcCCCHHHHHHHcCCCCCcceeeeCCCCCCHHHHHHHHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHC-CCEE
Confidence 468999999999999999999999999988889999999999999999988899999999999999999999886 6799
Q ss_pred EEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCccccCccEEEEcccccch--hhHHHHHHHHHHhcccCceEEEEe
Q 018346 157 TGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEMEASYDRIYSIEMFEHM--KNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 157 ~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~fD~Ii~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
+|+|+|+.+++.|+++....++. +++++.+|+.+++ ++||+|++..+++|+ +++..+++++.++|||||.+++.+
T Consensus 117 ~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 194 (318)
T 2fk8_A 117 IGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA--EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQS 194 (318)
T ss_dssp EEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC--CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC--CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 99999999999999999888774 7999999998765 789999999999999 789999999999999999999998
Q ss_pred ccCCCCCcccc--------cCCccchhhhcccCCCCCCCHHHHHhhc--CCcEEEEeEEecCccHHHHHHHHHHHHHhcH
Q 018346 234 FCHKTFAYHFE--------DTNDDDWITKYFFTGGTMPSANLLLYFQ--DDVSVVDHWLVNGKHYAQTSEEWLKRMDNNL 303 (357)
Q Consensus 234 ~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~p~~~~~~~~~--~~~~~~~~w~~~g~~y~~tl~~w~~~l~~~~ 303 (357)
++......... ......|+.++++|++.+++...+.... .++.+++ +...+.+|.+++..|..++.+..
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~-~~~~~~~y~~~~~~w~~~~~~~~ 273 (318)
T 2fk8_A 195 SVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPSTEMMVEHGEKAGFTVPE-PLSLRPHYIKTLRIWGDTLQSNK 273 (318)
T ss_dssp EECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHHTTCBCCC-CEECHHHHHHHHHHHHHHHHHTH
T ss_pred eccCCchhhhhccccccccccchhhHHHHhcCCCCcCCCHHHHHHHHHhCCCEEEE-EEecchhHHHHHHHHHHHHHHHH
Confidence 87654321000 0012367888889999888877766643 3666554 45567899999999999999887
Q ss_pred HHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHhcCCCCceEEEEEEEEeecC
Q 018346 304 ASIKPIMESTYGKDQAVKWTVYWRTFFIAVAELFGYNNGEEWMVTHFLFRKKM 356 (357)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 356 (357)
.++... +++ .+++.|+.|+..|+++|+.|. .++.||+++|+.
T Consensus 274 ~~~~~~----~~~----~~~~~~~~~l~~~~~~f~~g~---~~~~~~~~~k~~ 315 (318)
T 2fk8_A 274 DKAIEV----TSE----EVYNRYMKYLRGCEHYFTDEM---LDCSLVTYLKPG 315 (318)
T ss_dssp HHHHHH----SCH----HHHHHHHHHHHHHHHHHHTTS---CEEEEEEEECTT
T ss_pred HHHHHh----cCh----HHHHHHHHHHHHHHHHHHCCC---CeEEEEEEEeCC
Confidence 776654 343 588999999999999999999 569999999973
No 4
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.95 E-value=1.5e-26 Score=209.04 Aligned_cols=258 Identities=17% Similarity=0.227 Sum_probs=187.2
Q ss_pred hhhhhcCCChHHHHHhhcCCCCccccccCCCC--CCHHHHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCC
Q 018346 76 AKEQHYELPTSFFKLVLGKYFKYSCCYFSDAS--KTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSN 153 (357)
Q Consensus 76 ~~~~~y~~~~~~~~~~l~~~~~y~~~~f~~~~--~~l~~~~~~~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~ 153 (357)
.+..|||..+++|..++++.+++ ++|.... ..+.+++..+.+.+++.+++.++.+|||||||+|..+..+++.. +
T Consensus 8 ~~~~~Yd~~~~~y~~~~~~~~~~--~y~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~ 84 (273)
T 3bus_A 8 EVRQMYDDFTDPFARIWGENLHF--GYWEDAGADVSVDDATDRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATAR-D 84 (273)
T ss_dssp ---------------CCGGGCCC--CCCCCSSCCCCHHHHHHHHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHS-C
T ss_pred HHHHHHcchHHHHHHHcCCCceE--EecCCCccccCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhc-C
Confidence 34789999999999999987654 8887654 58999999999999999998899999999999999999999876 7
Q ss_pred cEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCccc-cCccEEEEcccccchhhHHHHHHHHHHhcccCceEEE
Q 018346 154 CKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFV 231 (357)
Q Consensus 154 ~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~~~-~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 231 (357)
.+|+|+|+|+.+++.+++++...++. +++++.+|+.+++++ ++||+|++..+++|+++...+++++.++|||||++++
T Consensus 85 ~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i 164 (273)
T 3bus_A 85 VRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAI 164 (273)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEE
T ss_pred CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEE
Confidence 89999999999999999999988874 799999999987765 7899999999999999999999999999999999999
Q ss_pred EeccCCCCCcccccCCccchhhh--cccCCCCCCCHHHHHhh-c-CCcEEEEeEEecCccHHHHHHHHHHHHHhcHHHHH
Q 018346 232 HHFCHKTFAYHFEDTNDDDWITK--YFFTGGTMPSANLLLYF-Q-DDVSVVDHWLVNGKHYAQTSEEWLKRMDNNLASIK 307 (357)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~~~~~~~~-~-~~~~~~~~w~~~g~~y~~tl~~w~~~l~~~~~~~~ 307 (357)
.++......... ...+... ..++....++...+... . .++.+++ +...+.+|.+++..|.+++.+....+.
T Consensus 165 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (273)
T 3bus_A 165 ADFVLLAPVEGA----KKEAVDAFRAGGGVLSLGGIDEYESDVRQAELVVTS-TVDISAQARPSLVKTAEAFENARSQVE 239 (273)
T ss_dssp EEEEESSCCCHH----HHHHHHHHHHHHTCCCCCCHHHHHHHHHHTTCEEEE-EEECHHHHTTHHHHHHHHHHHTHHHHH
T ss_pred EEeeccCCCChh----HHHHHHHHHhhcCccCCCCHHHHHHHHHHcCCeEEE-EEECcHhHHHHHHHHHHHHHHhHHHHH
Confidence 887654322111 0111111 12445566665555443 3 4677654 455577888899999999987755543
Q ss_pred HHHHhcCCccchHHHHHHHHHHHHHHHHHhcCCCCceEEEEEEEEeec
Q 018346 308 PIMESTYGKDQAVKWTVYWRTFFIAVAELFGYNNGEEWMVTHFLFRKK 355 (357)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 355 (357)
. .+|++..+.+...|+.+ +..+. ++.+.++++||
T Consensus 240 ~----~~~~~~~~~~~~~~~~~-------~~~~~---~~~~~~~~~kp 273 (273)
T 3bus_A 240 P----FMGAEGLDRMIATFRGL-------AEVPE---AGYVLIGARKP 273 (273)
T ss_dssp H----HHCHHHHHHHHHHHHHH-------HTCTT---EEEEEEEEECC
T ss_pred h----hcCHHHHHHHHHHHHHH-------hhCCC---eeEEEEEEECC
Confidence 3 45665445566666532 44444 88889999986
No 5
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.92 E-value=3.1e-23 Score=189.68 Aligned_cols=258 Identities=17% Similarity=0.195 Sum_probs=190.4
Q ss_pred hhhhhcCCC--hHHHHHhhc-CCCCccccccCCC--CCCHHHHHHHHHHHHHHHc----CCCCCCEEEEECCcccHHHHH
Q 018346 76 AKEQHYELP--TSFFKLVLG-KYFKYSCCYFSDA--SKTLEDAEKAMLELYCERS----RLEDGHTVLDVGCGWGSLSLY 146 (357)
Q Consensus 76 ~~~~~y~~~--~~~~~~~l~-~~~~y~~~~f~~~--~~~l~~~~~~~l~~l~~~~----~~~~~~~vLDiGcG~G~~~~~ 146 (357)
.+..|||.. .++|+.+++ +.+++ ++|... ...+...+...+..+++.+ .+.++.+|||+|||+|..+..
T Consensus 22 ~~~~~Yd~~~~~~~y~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~ 99 (297)
T 2o57_A 22 NAEIYYDDDDSDRFYFHVWGGEDIHV--GLYKEPVDQDEIREASLRTDEWLASELAMTGVLQRQAKGLDLGAGYGGAARF 99 (297)
T ss_dssp HHHHTHHHHHHHHHHHHHHTTSCCCS--CCCCSSGGGSCHHHHHHHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHH
T ss_pred HHHHHcCCccchhHHHHHhCCCceEE--EecCCCCCCcchHHHHHHHHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHH
Confidence 346889987 489988774 55544 788776 7889999999999999988 778899999999999999999
Q ss_pred HHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCccc-cCccEEEEcccccchhhHHHHHHHHHHhcc
Q 018346 147 IAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMK 224 (357)
Q Consensus 147 la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~~~-~~fD~Ii~~~~~~~~~~~~~~l~~~~~~Lk 224 (357)
+++.+ +++|+|+|+|+.+++.|+++....++. +++++.+|+.+++++ ++||+|++..+++|++++..+++++.++||
T Consensus 100 l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk 178 (297)
T 2o57_A 100 LVRKF-GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLK 178 (297)
T ss_dssp HHHHH-CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEE
T ss_pred HHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecchhhhcCCHHHHHHHHHHHcC
Confidence 99876 579999999999999999999888874 899999999987765 789999999999999999999999999999
Q ss_pred cCceEEEEeccCCCCCcccccCCccchhhhcccCCCCCCCHHHHHh-hc-CCcEEEEeEEec---CccHHHHHHHHHHHH
Q 018346 225 EDTLLFVHHFCHKTFAYHFEDTNDDDWITKYFFTGGTMPSANLLLY-FQ-DDVSVVDHWLVN---GKHYAQTSEEWLKRM 299 (357)
Q Consensus 225 pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~-~~~~~~~~w~~~---g~~y~~tl~~w~~~l 299 (357)
|||++++.++......... ....+......+. .++...+.. +. .|+..++..... ..+|.+++..|..+.
T Consensus 179 pgG~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (297)
T 2o57_A 179 PRGVMAITDPMKEDGIDKS---SIQPILDRIKLHD--MGSLGLYRSLAKECGLVTLRTFSRPDSLVHHYSKVKAELIKRS 253 (297)
T ss_dssp EEEEEEEEEEEECTTCCGG---GGHHHHHHHTCSS--CCCHHHHHHHHHHTTEEEEEEEECHHHHHHHHHHHHHHHHHTH
T ss_pred CCeEEEEEEeccCCCCchH---HHHHHHHHhcCCC--CCCHHHHHHHHHHCCCeEEEEEECchhhHHHHHHHHHHHHHhH
Confidence 9999999988655432111 1122333322222 334433333 22 467766554322 235666666555432
Q ss_pred HhcHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHhcCCCCceEEEEEEEEeecC
Q 018346 300 DNNLASIKPIMESTYGKDQAVKWTVYWRTFFIAVAELFGYNNGEEWMVTHFLFRKKM 356 (357)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 356 (357)
.+ +.+..+ ..++..|...+..+...++.|. ++...|+++|+.
T Consensus 254 ~~--------~~~~~~----~~~~~~~~~~~~~~~~~~~~g~---~~~~~~~a~Kp~ 295 (297)
T 2o57_A 254 SE--------IASFCS----PEFQANMKRGLEHWIEGGRAGK---LTWGGMLFRKSD 295 (297)
T ss_dssp HH--------HTTTSC----HHHHHHHHHHHHHHHHHHHTTS---EEEEEEEEEESS
T ss_pred HH--------HhccCC----HHHHHHHHHHHHHHHHhccCCe---EEEEEEEEECCC
Confidence 21 112233 2466777777777777777776 778899999974
No 6
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.89 E-value=9.9e-22 Score=176.28 Aligned_cols=218 Identities=19% Similarity=0.247 Sum_probs=163.1
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc-c
Q 018346 117 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-A 195 (357)
Q Consensus 117 ~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~ 195 (357)
....+++.+.+.++.+|||+|||+|.++..+++.+ +++|+|+|+|+.+++.|+++.... ++++++++|+.+.+.+ +
T Consensus 43 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~~~~~ 119 (266)
T 3ujc_A 43 ATKKILSDIELNENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGN--NKIIFEANDILTKEFPEN 119 (266)
T ss_dssp HHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSC--TTEEEEECCTTTCCCCTT
T ss_pred HHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcC--CCeEEEECccccCCCCCC
Confidence 45567777778889999999999999999999987 789999999999999999876554 4899999999987664 7
Q ss_pred CccEEEEcccccch--hhHHHHHHHHHHhcccCceEEEEeccCCCCCcccccCCccchhhhcccCC-CCCCCHHHHHhh-
Q 018346 196 SYDRIYSIEMFEHM--KNYQNLLKKISKWMKEDTLLFVHHFCHKTFAYHFEDTNDDDWITKYFFTG-GTMPSANLLLYF- 271 (357)
Q Consensus 196 ~fD~Ii~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~- 271 (357)
+||+|+++.+++|+ +++..+++++.++|||||.+++.++....... .......+..+. ...++...+...
T Consensus 120 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l 193 (266)
T 3ujc_A 120 NFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKEN------WDDEFKEYVKQRKYTLITVEEYADIL 193 (266)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGG------CCHHHHHHHHHHTCCCCCHHHHHHHH
T ss_pred cEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCccc------chHHHHHHHhcCCCCCCCHHHHHHHH
Confidence 89999999999999 89999999999999999999999886654211 111222222222 234454444443
Q ss_pred c-CCcEEEEeEEecCccHHHHHHHHHHHHHhcHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHhcCCCCceEEEEEE
Q 018346 272 Q-DDVSVVDHWLVNGKHYAQTSEEWLKRMDNNLASIKPIMESTYGKDQAVKWTVYWRTFFIAVAELFGYNNGEEWMVTHF 350 (357)
Q Consensus 272 ~-~~~~~~~~w~~~g~~y~~tl~~w~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~ 350 (357)
. .++..++. ...+.+|..++..|.+.+.+....+... ++++....+...|+.++.+|.. +...|++.
T Consensus 194 ~~~Gf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-----g~~~w~~~-- 261 (266)
T 3ujc_A 194 TACNFKNVVS-KDLSDYWNQLLEVEHKYLHENKEEFLKL----FSEKKFISLDDGWSRKIKDSKR-----KMQRWGYF-- 261 (266)
T ss_dssp HHTTCEEEEE-EECHHHHHHHHHHHHHHHHHTHHHHHHH----SCHHHHHHHHHHHHHHHHHHHT-----TSEEEEEE--
T ss_pred HHcCCeEEEE-EeCCHHHHHHHHHHHHHHHhCHHHHHHh----cCHHHHHHHHHHHHHHHHHHHc-----CcccceEE--
Confidence 2 46776654 4456788899999999998887776654 5655555667779988888874 22335554
Q ss_pred EEeec
Q 018346 351 LFRKK 355 (357)
Q Consensus 351 ~~~~~ 355 (357)
.++||
T Consensus 262 ~~~Kp 266 (266)
T 3ujc_A 262 KATKN 266 (266)
T ss_dssp EEECC
T ss_pred EEeCC
Confidence 45665
No 7
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.87 E-value=2e-21 Score=175.86 Aligned_cols=191 Identities=18% Similarity=0.223 Sum_probs=146.5
Q ss_pred CCHHHHHHHHHHHHhhh----hhcCCCCCHHHHHHHHHHHHHHh-ccCCccccchhhhhhhcCCChHHHHHhhcCCCCcc
Q 018346 25 LPDAVIRRLSRLLLGGR----LRSGYKPSAELQLSDLLQFAHSL-REMPIAIQTDKAKEQHYELPTSFFKLVLGKYFKYS 99 (357)
Q Consensus 25 ~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~y~~~~~~~~~~l~~~~~y~ 99 (357)
.|...++.++...+... +.....+..+++...+..++.++ ++.|.+|+.+. ..||+....+.+..+.|+
T Consensus 19 ~~~~~a~~ll~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~g~--~~f~~~~~~~~~~~~ipr---- 92 (276)
T 2b3t_A 19 SPRRDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGV--REFWSLPLFVSPATLIPR---- 92 (276)
T ss_dssp CHHHHHHHHHHHHHTCCHHHHHHTTTCBCCHHHHHHHHHHHHHHHTTCCHHHHSCE--EEETTEEEECCTTSCCCC----
T ss_pred CcHHHHHHHHHHHhCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHcCCChhHeeee--eEECCceEEeCCCCcccC----
Confidence 45666777777766522 23344556677888888888877 89999999987 778876554444444443
Q ss_pred ccccCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCC
Q 018346 100 CCYFSDASKTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ 179 (357)
Q Consensus 100 ~~~f~~~~~~l~~~~~~~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~ 179 (357)
+++ ..+++.+++.+. .++.+|||+|||+|.++..+++..|+.+|+|+|+|+.+++.|++++...+++
T Consensus 93 -----~~t-------e~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~ 159 (276)
T 2b3t_A 93 -----PDT-------ECLVEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIK 159 (276)
T ss_dssp -----TTH-------HHHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCC
T ss_pred -----chH-------HHHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC
Confidence 221 224445555554 5678999999999999999999888899999999999999999999998887
Q ss_pred CeEEEEeccCCCccccCccEEEEcccccch-------------------------hhHHHHHHHHHHhcccCceEEEEec
Q 018346 180 NVEIIVADISTFEMEASYDRIYSIEMFEHM-------------------------KNYQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 180 ~v~~~~~d~~~~~~~~~fD~Ii~~~~~~~~-------------------------~~~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
+++++++|+.+....++||+|++++++... ..+..+++.+.++|+|||+++++..
T Consensus 160 ~v~~~~~d~~~~~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~ 239 (276)
T 2b3t_A 160 NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHG 239 (276)
T ss_dssp SEEEECCSTTGGGTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred ceEEEEcchhhhcccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 899999999874324789999999877543 3567899999999999999999753
No 8
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.86 E-value=1e-20 Score=174.35 Aligned_cols=211 Identities=16% Similarity=0.193 Sum_probs=158.5
Q ss_pred hhhcCCChHHHHHhhcCC-CCccccccCCCCCCHHHHHHHHHHHHHHHcC-CCCCCEEEEECCcccHHHHHHHHHCCCcE
Q 018346 78 EQHYELPTSFFKLVLGKY-FKYSCCYFSDASKTLEDAEKAMLELYCERSR-LEDGHTVLDVGCGWGSLSLYIAQKYSNCK 155 (357)
Q Consensus 78 ~~~y~~~~~~~~~~l~~~-~~y~~~~f~~~~~~l~~~~~~~l~~l~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~p~~~ 155 (357)
..+|+.+.+++..+.++. +.|+...|.. ....+......+++.+. +.++.+|||+|||+|.++..+++.+ +++
T Consensus 68 ~~~y~~~~~~~~~~~~~~~~~y~~~~f~~----~~~~~~~~~~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~-~~~ 142 (312)
T 3vc1_A 68 HHHYGIGPVDRAALGDPEHSEYEKKVIAE----LHRLESAQAEFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRF-GSR 142 (312)
T ss_dssp CCSCCCSCCCHHHHCCTTSTTHHHHHHHH----HHHHHHHHHHHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHH-CCE
T ss_pred hhhcCCchhHHHhhcCCCccccchHHHhh----hhhHHHHHHHHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHc-CCE
Confidence 467888888888888877 8888887773 33344445566777777 7788999999999999999999886 689
Q ss_pred EEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCccc-cCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEe
Q 018346 156 ITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 156 v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~~~-~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
|+|+|+|+.+++.|++++...+++ +++++.+|+.+++++ ++||+|+++.+++++ +...+++++.++|||||++++.+
T Consensus 143 v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 143 VEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNESTMYV-DLHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECCchhhC-CHHHHHHHHHHHcCCCcEEEEEE
Confidence 999999999999999999998885 899999999987755 789999999999999 59999999999999999999988
Q ss_pred ccCCCCCcccccCCccchhhhcccCCCCCCCHHHHHh-hc-CCcEEEEeEEecCccHHHHHHHHHHHHHhc
Q 018346 234 FCHKTFAYHFEDTNDDDWITKYFFTGGTMPSANLLLY-FQ-DDVSVVDHWLVNGKHYAQTSEEWLKRMDNN 302 (357)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~-~~~~~~~~w~~~g~~y~~tl~~w~~~l~~~ 302 (357)
++........ .....++.+..+++ .++...+.. +. .|+..++.... + ..++..|..++.+.
T Consensus 222 ~~~~~~~~~~--~~~~~~~~~~~~~~--~~s~~~~~~~l~~aGf~~~~~~~~-~---~~~~~~w~~~~~~~ 284 (312)
T 3vc1_A 222 GCWNPRYGQP--SKWVSQINAHFECN--IHSRREYLRAMADNRLVPHTIVDL-T---PDTLPYWELRATSS 284 (312)
T ss_dssp EEECTTTCSC--CHHHHHHHHHHTCC--CCBHHHHHHHHHTTTEEEEEEEEC-H---HHHHHHHHHHTTST
T ss_pred ccccccccch--hHHHHHHHhhhcCC--CCCHHHHHHHHHHCCCEEEEEEeC-C---HHHHHHHHHHHHHh
Confidence 7665432111 01122333333332 344444433 33 35665554322 2 46888898877754
No 9
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.84 E-value=2.5e-20 Score=167.73 Aligned_cols=198 Identities=16% Similarity=0.176 Sum_probs=140.5
Q ss_pred HHHHHcC-CCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCccc-cC
Q 018346 120 LYCERSR-LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEME-AS 196 (357)
Q Consensus 120 ~l~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~~~-~~ 196 (357)
.++..+. +.++.+|||||||+|..+..+++. ++++|+|+|+|+.+++.|++++...+++ +++++++|+.+++.+ ++
T Consensus 36 ~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 114 (267)
T 3kkz_A 36 KALSFIDNLTEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEE 114 (267)
T ss_dssp HHHTTCCCCCTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTC
T ss_pred HHHHhcccCCCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCC
Confidence 3455544 567899999999999999999987 6789999999999999999999998884 699999999987754 78
Q ss_pred ccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEeccCCCCCcccccCCccchhhhcccCCCCCCCHHHHHhh--cCC
Q 018346 197 YDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHKTFAYHFEDTNDDDWITKYFFTGGTMPSANLLLYF--QDD 274 (357)
Q Consensus 197 fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~--~~~ 274 (357)
||+|+++.+++++ ++..+++++.++|||||++++.+++......... ....|... ++ .+++...+... ..|
T Consensus 115 fD~i~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~--~~~~~~~~--~~--~~~~~~~~~~~l~~aG 187 (267)
T 3kkz_A 115 LDLIWSEGAIYNI-GFERGLNEWRKYLKKGGYLAVSECSWFTDERPAE--INDFWMDA--YP--EIDTIPNQVAKIHKAG 187 (267)
T ss_dssp EEEEEESSCGGGT-CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHH--HHHHHHHH--CT--TCEEHHHHHHHHHHTT
T ss_pred EEEEEEcCCceec-CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHH--HHHHHHHh--CC--CCCCHHHHHHHHHHCC
Confidence 9999999999999 8899999999999999999998876432211100 01122222 22 33444444332 256
Q ss_pred cEEEEeEEecC----ccHHHHHHHHHHHHHhc---HHHHHHHHHhcCCccchHHHHHHHHHHHH
Q 018346 275 VSVVDHWLVNG----KHYAQTSEEWLKRMDNN---LASIKPIMESTYGKDQAVKWTVYWRTFFI 331 (357)
Q Consensus 275 ~~~~~~w~~~g----~~y~~tl~~w~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (357)
+..++...... .+|..++..|...+.+. ..++.+++. ..+...+.|+.|..
T Consensus 188 f~~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~y~~ 245 (267)
T 3kkz_A 188 YLPVATFILPENCWTDHYFTPKVAAQKIFLTKYAGNKIAEEFSM------LQSIEEELYHKYKE 245 (267)
T ss_dssp EEEEEEEECCGGGTTTTTHHHHHHHHHHHHHHTTTCHHHHHHHH------HHHHHHHHHHHHTT
T ss_pred CEEEEEEECCHhHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH------HHHHHHHHHHHhcc
Confidence 77666543321 57888999998887542 223333321 11234677776653
No 10
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.83 E-value=2.8e-20 Score=168.91 Aligned_cols=202 Identities=13% Similarity=0.093 Sum_probs=142.7
Q ss_pred HHHHHHhHhcCC-CCHHHHHHHHHHHHhhhhhc--CCC--CCHHHHHHHHHHHHHHh-ccCCccccchhhhhhhcCCChH
Q 018346 13 VRLMLSSLERNL-LPDAVIRRLSRLLLGGRLRS--GYK--PSAELQLSDLLQFAHSL-REMPIAIQTDKAKEQHYELPTS 86 (357)
Q Consensus 13 ~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~y~~~~~ 86 (357)
.+.+...+.+.+ .+...++.++...+...... ... ...... ..+.+++.++ ++.|.+|+.+. ..||+....
T Consensus 20 ~~~~~~~l~~~~~~~~~~a~~ll~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~r~~~~p~~yi~g~--~~f~~~~~~ 96 (284)
T 1nv8_A 20 IRDCSGKLEGVTETSVLEVLLIVSRVLGIRKEDLFLKDLGVSPTEE-KRILELVEKRASGYPLHYILGE--KEFMGLSFL 96 (284)
T ss_dssp HHHHHHHTTTTCSCHHHHHHHHHHHHHTCCGGGGCCSSCCCCHHHH-HHHHHHHHHHHTTCCHHHHHTE--EEETTEEEE
T ss_pred HHHHHHHHHhccCChHHHHHHHHHHHcCCCHHHHHhccccccccCH-HHHHHHHHHHHCCCCCeEEeee--eEECCeEEE
Confidence 444444443333 25566777777776632211 111 121122 6788888887 89999999997 788887766
Q ss_pred HHHHhhcCCCCccccccCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHH
Q 018346 87 FFKLVLGKYFKYSCCYFSDASKTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQK 166 (357)
Q Consensus 87 ~~~~~l~~~~~y~~~~f~~~~~~l~~~~~~~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l 166 (357)
+...++.|+ ++++.+.+ .+++.+...++.+|||+|||+|.++..+++. |+.+|+|+|+|+.++
T Consensus 97 v~~~~lipr---------~~te~lv~-------~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al 159 (284)
T 1nv8_A 97 VEEGVFVPR---------PETEELVE-------LALELIRKYGIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAV 159 (284)
T ss_dssp CCTTSCCCC---------TTHHHHHH-------HHHHHHHHHTCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHH
T ss_pred eCCCceecC---------hhHHHHHH-------HHHHHhcccCCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHH
Confidence 555555554 33333332 2333222235679999999999999999999 899999999999999
Q ss_pred HHHHHHHHHcCCC-CeEEEEeccCCCccccCc---cEEEEcccccchhh-------------------HHHHHHHHH-Hh
Q 018346 167 EFIEEQCRVLELQ-NVEIIVADISTFEMEASY---DRIYSIEMFEHMKN-------------------YQNLLKKIS-KW 222 (357)
Q Consensus 167 ~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~f---D~Ii~~~~~~~~~~-------------------~~~~l~~~~-~~ 222 (357)
+.|++|+...+++ +++|+++|+.+.. +++| |+|++|+++....+ ...+++++. +.
T Consensus 160 ~~A~~n~~~~~l~~~v~~~~~D~~~~~-~~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~ 238 (284)
T 1nv8_A 160 EIARKNAERHGVSDRFFVRKGEFLEPF-KEKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRY 238 (284)
T ss_dssp HHHHHHHHHTTCTTSEEEEESSTTGGG-GGGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCCceEEEECcchhhc-ccccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhc
Confidence 9999999999886 5999999998732 3578 99999988753211 126889999 99
Q ss_pred cccCceEEEEecc
Q 018346 223 MKEDTLLFVHHFC 235 (357)
Q Consensus 223 LkpgG~l~~~~~~ 235 (357)
|+|||++++++..
T Consensus 239 l~pgG~l~~e~~~ 251 (284)
T 1nv8_A 239 DTSGKIVLMEIGE 251 (284)
T ss_dssp CCTTCEEEEECCT
T ss_pred CCCCCEEEEEECc
Confidence 9999999997553
No 11
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.83 E-value=5e-19 Score=157.93 Aligned_cols=120 Identities=15% Similarity=0.163 Sum_probs=107.7
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCcccc
Q 018346 117 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEMEA 195 (357)
Q Consensus 117 ~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~ 195 (357)
.+..+++.+.+.++.+|||+|||+|..+..+++.. +.+|+|+|+|+.+++.|++++...+++ +++++++|+.++++.+
T Consensus 24 ~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 102 (256)
T 1nkv_A 24 KYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVANE 102 (256)
T ss_dssp HHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCCSS
T ss_pred HHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCcCC
Confidence 45556777778889999999999999999999887 679999999999999999999988874 8999999999876567
Q ss_pred CccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEeccCC
Q 018346 196 SYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 196 ~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 237 (357)
+||+|++..+++++++...+++++.++|||||.+++..+...
T Consensus 103 ~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~ 144 (256)
T 1nkv_A 103 KCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYWR 144 (256)
T ss_dssp CEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEET
T ss_pred CCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCccc
Confidence 899999999999999999999999999999999999877543
No 12
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.81 E-value=5.1e-19 Score=158.53 Aligned_cols=117 Identities=23% Similarity=0.355 Sum_probs=99.7
Q ss_pred HHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCccc
Q 018346 118 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEME 194 (357)
Q Consensus 118 l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~~~ 194 (357)
+..+++.. ++++.+|||+|||+|..+..+++.+ |+++|+|+|+|+.|++.|++++...+.. +|+++++|+.+++.
T Consensus 60 i~~l~~~~-~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~- 137 (261)
T 4gek_A 60 IGMLAERF-VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAI- 137 (261)
T ss_dssp HHHHHHHH-CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCC-
T ss_pred HHHHHHHh-CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccc-
Confidence 33344432 4688999999999999999999875 5789999999999999999999887764 89999999998765
Q ss_pred cCccEEEEcccccchh--hHHHHHHHHHHhcccCceEEEEeccC
Q 018346 195 ASYDRIYSIEMFEHMK--NYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 195 ~~fD~Ii~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
++||+|+++.++++++ +...+++++.++|||||++++.....
T Consensus 138 ~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~ 181 (261)
T 4gek_A 138 ENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFS 181 (261)
T ss_dssp CSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred cccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccC
Confidence 5799999999999984 45678999999999999999976644
No 13
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.80 E-value=4.1e-18 Score=152.09 Aligned_cols=115 Identities=21% Similarity=0.310 Sum_probs=101.9
Q ss_pred HHHHHc-CCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCccc-cC
Q 018346 120 LYCERS-RLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEME-AS 196 (357)
Q Consensus 120 ~l~~~~-~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~~~-~~ 196 (357)
.++..+ .+.++.+|||+|||+|..+..+++..| .+|+|+|+|+.+++.|++++...+++ +++++++|+.+++.+ ++
T Consensus 36 ~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 114 (257)
T 3f4k_A 36 KAVSFINELTDDAKIADIGCGTGGQTLFLADYVK-GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEE 114 (257)
T ss_dssp HHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCC-SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTC
T ss_pred HHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCC-CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCC
Confidence 344444 456788999999999999999999975 49999999999999999999998885 599999999887755 78
Q ss_pred ccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 197 YDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 197 fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
||+|+++.+++++ +...+++++.++|||||++++.+++.
T Consensus 115 fD~v~~~~~l~~~-~~~~~l~~~~~~L~pgG~l~~~~~~~ 153 (257)
T 3f4k_A 115 LDLIWSEGAIYNI-GFERGMNEWSKYLKKGGFIAVSEASW 153 (257)
T ss_dssp EEEEEEESCSCCC-CHHHHHHHHHTTEEEEEEEEEEEEEE
T ss_pred EEEEEecChHhhc-CHHHHHHHHHHHcCCCcEEEEEEeec
Confidence 9999999999999 78999999999999999999998753
No 14
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.80 E-value=4.6e-19 Score=160.07 Aligned_cols=129 Identities=25% Similarity=0.381 Sum_probs=108.5
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEecc
Q 018346 109 TLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADI 188 (357)
Q Consensus 109 ~l~~~~~~~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~ 188 (357)
.+......+...+.....+.++.+|||||||+|.++..+++..|+.+|+|+|+|+.+++.+++++...+.++++++.+|+
T Consensus 17 ~~~~~~~~l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~ 96 (276)
T 3mgg_A 17 RLSEQAETLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANI 96 (276)
T ss_dssp ------CHHHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCG
T ss_pred hHHHHHHHHHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEccc
Confidence 33333333334444445557889999999999999999999988899999999999999999999998888999999999
Q ss_pred CCCccc-cCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEeccCC
Q 018346 189 STFEME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 189 ~~~~~~-~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 237 (357)
.+++.+ ++||+|+++.++++++++..+++++.++|||||++++..+...
T Consensus 97 ~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 146 (276)
T 3mgg_A 97 FSLPFEDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGDHG 146 (276)
T ss_dssp GGCCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECGG
T ss_pred ccCCCCCCCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEEcCCC
Confidence 987654 7899999999999999999999999999999999999887653
No 15
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.79 E-value=2.2e-18 Score=148.70 Aligned_cols=114 Identities=12% Similarity=0.119 Sum_probs=94.4
Q ss_pred HHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHc------------CCCCeEEEEec
Q 018346 120 LYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL------------ELQNVEIIVAD 187 (357)
Q Consensus 120 ~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~------------~~~~v~~~~~d 187 (357)
.++..+.+.++.+|||+|||+|..+..+++. +.+|+|+|+|+.|++.|+++.... ...+++++++|
T Consensus 13 ~~~~~l~~~~~~~vLD~GCG~G~~~~~la~~--g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d 90 (203)
T 1pjz_A 13 QYWSSLNVVPGARVLVPLCGKSQDMSWLSGQ--GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGD 90 (203)
T ss_dssp HHHHHHCCCTTCEEEETTTCCSHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEEC
T ss_pred HHHHhcccCCCCEEEEeCCCCcHhHHHHHHC--CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECc
Confidence 3445556678899999999999999999988 789999999999999998876421 12489999999
Q ss_pred cCCCccc--cCccEEEEcccccchh--hHHHHHHHHHHhcccCceEEEEecc
Q 018346 188 ISTFEME--ASYDRIYSIEMFEHMK--NYQNLLKKISKWMKEDTLLFVHHFC 235 (357)
Q Consensus 188 ~~~~~~~--~~fD~Ii~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~ 235 (357)
+.++++. ++||+|+++.++++++ +...+++++.++|||||++++.+..
T Consensus 91 ~~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~ 142 (203)
T 1pjz_A 91 FFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLE 142 (203)
T ss_dssp CSSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEES
T ss_pred cccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEe
Confidence 9998764 6899999999999884 4567899999999999996555443
No 16
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.79 E-value=5.7e-19 Score=158.13 Aligned_cols=119 Identities=15% Similarity=0.123 Sum_probs=105.1
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc-c
Q 018346 117 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-A 195 (357)
Q Consensus 117 ~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~ 195 (357)
.+..+++.+...++.+|||+|||+|.++..+++.. .+|+|+|+|+.+++.|++++...+.+++.++.+|+.+++++ +
T Consensus 25 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~ 102 (260)
T 1vl5_A 25 DLAKLMQIAALKGNEEVLDVATGGGHVANAFAPFV--KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDE 102 (260)
T ss_dssp CHHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTT
T ss_pred HHHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCC
Confidence 34456666677788999999999999999999884 59999999999999999999888877899999999987765 7
Q ss_pred CccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEeccCC
Q 018346 196 SYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 196 ~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 237 (357)
+||+|+++.+++|++++..+++++.++|||||++++..+..+
T Consensus 103 ~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~~ 144 (260)
T 1vl5_A 103 RFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNSAP 144 (260)
T ss_dssp CEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEBC
T ss_pred CEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcCCC
Confidence 899999999999999999999999999999999999876543
No 17
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.78 E-value=1e-18 Score=155.84 Aligned_cols=152 Identities=11% Similarity=0.057 Sum_probs=112.3
Q ss_pred HHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccC-CCccccC
Q 018346 118 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADIS-TFEMEAS 196 (357)
Q Consensus 118 l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~-~~~~~~~ 196 (357)
...+++.+.+.++.+|||||||+|.++..+++. +.+|+|+|+|+.|++.|++++....+ ++.+...+.. .....++
T Consensus 34 ~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~--g~~V~gvD~S~~ml~~Ar~~~~~~~v-~~~~~~~~~~~~~~~~~~ 110 (261)
T 3iv6_A 34 RENDIFLENIVPGSTVAVIGASTRFLIEKALER--GASVTVFDFSQRMCDDLAEALADRCV-TIDLLDITAEIPKELAGH 110 (261)
T ss_dssp HHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTSSSCC-EEEECCTTSCCCGGGTTC
T ss_pred HHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHhccc-eeeeeecccccccccCCC
Confidence 345666777888999999999999999999987 78999999999999999998755411 2222222220 0111368
Q ss_pred ccEEEEcccccch--hhHHHHHHHHHHhcccCceEEEEeccCCCC----------------------CcccccCCccchh
Q 018346 197 YDRIYSIEMFEHM--KNYQNLLKKISKWMKEDTLLFVHHFCHKTF----------------------AYHFEDTNDDDWI 252 (357)
Q Consensus 197 fD~Ii~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~----------------------~~~~~~~~~~~~~ 252 (357)
||+|+++.+++|+ ++...+++++.++| |||+++++....... ...........|+
T Consensus 111 fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~g~~~~d~~~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~i 189 (261)
T 3iv6_A 111 FDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKLGFYDIDLKLIEYGEQSGTLAKFFDPSDKTFHFREAGDVL 189 (261)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEBSCCHHHHHHHHHHHTTTCHHHHEETTTTEEEGGGTTHHH
T ss_pred ccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEeccCcccccHHHHHHHHhcCCeeeeecCcccceehhhhhhHH
Confidence 9999999999987 56778999999999 999999986543110 0000012357899
Q ss_pred hhcccCCCCCCCHHHHHhhcC
Q 018346 253 TKYFFTGGTMPSANLLLYFQD 273 (357)
Q Consensus 253 ~~~~~~~~~~p~~~~~~~~~~ 273 (357)
.+++||+|.+|+...+.....
T Consensus 190 ~~~~~p~g~~~~~~~~~~~~~ 210 (261)
T 3iv6_A 190 DRALVPHGLIDKPTLLEWYRR 210 (261)
T ss_dssp HHHCCCCTTCCHHHHHHHHHH
T ss_pred HhccCCCCcccHHHHHHHHHh
Confidence 999999999999888776553
No 18
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.78 E-value=1e-19 Score=162.35 Aligned_cols=185 Identities=19% Similarity=0.246 Sum_probs=128.6
Q ss_pred HHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc-cCc
Q 018346 119 ELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASY 197 (357)
Q Consensus 119 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~f 197 (357)
..+.+.+...++.+|||+|||+|..+..+++..+ .+|+|+|+|+.+++.|+++.. ..+++++.+|+.+++.+ ++|
T Consensus 34 ~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~~~~~~~f 109 (253)
T 3g5l_A 34 HELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGA-KKVLGIDLSERMLTEAKRKTT---SPVVCYEQKAIEDIAIEPDAY 109 (253)
T ss_dssp HHHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHCC---CTTEEEEECCGGGCCCCTTCE
T ss_pred HHHHHhhhccCCCEEEEECCCCCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHhhc---cCCeEEEEcchhhCCCCCCCe
Confidence 3455556666789999999999999999998842 399999999999999998765 23899999999887764 789
Q ss_pred cEEEEcccccchhhHHHHHHHHHHhcccCceEEEEeccCCCCCcccccCCccchhhhcccCCCCCCCHHHHHhhcCCcEE
Q 018346 198 DRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHKTFAYHFEDTNDDDWITKYFFTGGTMPSANLLLYFQDDVSV 277 (357)
Q Consensus 198 D~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 277 (357)
|+|+++.+++++++...+++++.++|||||.+++.+++....... ...|... ..+.........++..+..
T Consensus 110 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~-----~~~~~~~---~~~~~~~~~~~~~~~~~~~- 180 (253)
T 3g5l_A 110 NVVLSSLALHYIASFDDICKKVYINLKSSGSFIFSVEHPVFTADG-----RQDWYTD---ETGNKLHWPVDRYFNESMR- 180 (253)
T ss_dssp EEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHSSS-----SCSCEEC---SSCCEEEEEECCTTCCCEE-
T ss_pred EEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEEeCCCccccCc-----cccceec---cCCceEEEEeccccccceE-
Confidence 999999999999999999999999999999999987654321110 1112110 0000000000001111111
Q ss_pred EEeEEe-cCccHHHHHHHHHHHHHhcHHHHHHHHHhcCCc
Q 018346 278 VDHWLV-NGKHYAQTSEEWLKRMDNNLASIKPIMESTYGK 316 (357)
Q Consensus 278 ~~~w~~-~g~~y~~tl~~w~~~l~~~~~~~~~~~~~~~~~ 316 (357)
...|.. ....|++|..+|.+.|.++||++.+..++..++
T Consensus 181 ~~~~~~~~~~~~~~t~~~~~~~l~~aGF~~~~~~e~~~~~ 220 (253)
T 3g5l_A 181 TSHFLGEDVQKYHRTVTTYIQTLLKNGFQINSVIEPEPAP 220 (253)
T ss_dssp EEEETTEEEEEECCCHHHHHHHHHHTTEEEEEEECCCCCG
T ss_pred EEeeccccCccEecCHHHHHHHHHHcCCeeeeeecCCCch
Confidence 112211 123455689999999999999998876655543
No 19
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.78 E-value=2.1e-18 Score=150.23 Aligned_cols=119 Identities=21% Similarity=0.294 Sum_probs=106.8
Q ss_pred HHHHHcCCCCCCEEEEECCcccHHHHHHHHHC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc-cCc
Q 018346 120 LYCERSRLEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASY 197 (357)
Q Consensus 120 ~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~f 197 (357)
.+++.+.+.++.+|||+|||+|.++..+++.. |..+|+|+|+|+.+++.+++++...++++++++.+|+.+++.+ ++|
T Consensus 28 ~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~f 107 (219)
T 3dh0_A 28 KVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTV 107 (219)
T ss_dssp HHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCE
T ss_pred HHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCe
Confidence 35555667788999999999999999999986 6789999999999999999999988887899999999887655 789
Q ss_pred cEEEEcccccchhhHHHHHHHHHHhcccCceEEEEeccCCC
Q 018346 198 DRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHKT 238 (357)
Q Consensus 198 D~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 238 (357)
|+|+++.+++++++...+++++.++|+|||.+++..+....
T Consensus 108 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 148 (219)
T 3dh0_A 108 DFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEE 148 (219)
T ss_dssp EEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSC
T ss_pred eEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEecccc
Confidence 99999999999999999999999999999999998776544
No 20
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.78 E-value=3.6e-18 Score=154.02 Aligned_cols=131 Identities=16% Similarity=0.192 Sum_probs=112.0
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHC-CCcEEEEEcCCHH------HHHHHHHHHHHcCC-C
Q 018346 108 KTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKT------QKEFIEEQCRVLEL-Q 179 (357)
Q Consensus 108 ~~l~~~~~~~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~~vD~s~~------~l~~a~~~~~~~~~-~ 179 (357)
..+..++......+++.+.+.++.+|||||||+|.++..+++.+ |..+|+|+|+|+. +++.|++++...++ +
T Consensus 22 ~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~ 101 (275)
T 3bkx_A 22 RTIQRRQTAHRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGD 101 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGG
T ss_pred hHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCC
Confidence 35667778888888988888899999999999999999999985 6689999999997 99999999988776 4
Q ss_pred CeEEEEec-c--CCCccc-cCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEeccCCC
Q 018346 180 NVEIIVAD-I--STFEME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHKT 238 (357)
Q Consensus 180 ~v~~~~~d-~--~~~~~~-~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 238 (357)
+++++.+| . ..++++ ++||+|+++.+++|+++...+++.+..+++|||.+++..+....
T Consensus 102 ~v~~~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~~~ 164 (275)
T 3bkx_A 102 RLTVHFNTNLSDDLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSMQP 164 (275)
T ss_dssp GEEEECSCCTTTCCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECSSC
T ss_pred ceEEEECChhhhccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecCCC
Confidence 89999998 3 333433 78999999999999988888888888888889999998877654
No 21
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.77 E-value=1.6e-18 Score=156.01 Aligned_cols=155 Identities=11% Similarity=0.128 Sum_probs=115.9
Q ss_pred hhhhhcCCChHHHHHhhcCCCCccccccCC-CCCCHHHHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCc
Q 018346 76 AKEQHYELPTSFFKLVLGKYFKYSCCYFSD-ASKTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNC 154 (357)
Q Consensus 76 ~~~~~y~~~~~~~~~~l~~~~~y~~~~f~~-~~~~l~~~~~~~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~ 154 (357)
..+.+|+....+|+..++.++.....-|.. ......+....+.+.-...+.+.++.+|||||||+|.++..++.+.+++
T Consensus 68 ~~~~~y~~~~~~~E~~wa~~l~~~~~p~~~l~~fpy~~~~~~l~~~E~~la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga 147 (298)
T 3fpf_A 68 LIRKFYVNLGMKLEMEKAQEVIESDSPWETLRSFYFYPRYLELLKNEAALGRFRRGERAVFIGGGPLPLTGILLSHVYGM 147 (298)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSSHHHHHHTSTTHHHHHHHHHHHHHHTTCCTTCEEEEECCCSSCHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCChHHhhccCCCcccHHHHHHHHHHHcCCCCcCEEEEECCCccHHHHHHHHHccCC
Confidence 346888888888888777654322110000 0011111223333333456788899999999999998775555555689
Q ss_pred EEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccccCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEec
Q 018346 155 KITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 155 ~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
+|+|+|+|+++++.|+++++..|+++++|+++|+.+++ .++||+|++... .++..++++++.++|||||++++...
T Consensus 148 ~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~-d~~FDvV~~~a~---~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 148 RVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID-GLEFDVLMVAAL---AEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG-GCCCSEEEECTT---CSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred EEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC-CCCcCEEEECCC---ccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 99999999999999999999888889999999998875 578999998655 47889999999999999999998764
No 22
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.77 E-value=4.6e-18 Score=147.62 Aligned_cols=117 Identities=21% Similarity=0.281 Sum_probs=104.2
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCccc-
Q 018346 117 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEME- 194 (357)
Q Consensus 117 ~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~~~- 194 (357)
....+++.+...++ +|||+|||+|.++..+++. |+.+|+|+|+|+.+++.|++++...++. +++++++|+.+++.+
T Consensus 32 ~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 109 (219)
T 3dlc_A 32 IAENIINRFGITAG-TCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIED 109 (219)
T ss_dssp HHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCT
T ss_pred HHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCc
Confidence 44556666666666 9999999999999999988 6889999999999999999999988874 899999999987655
Q ss_pred cCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEecc
Q 018346 195 ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFC 235 (357)
Q Consensus 195 ~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 235 (357)
++||+|+++.+++|+++...+++++.++|+|||.+++....
T Consensus 110 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 150 (219)
T 3dlc_A 110 NYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGF 150 (219)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEecc
Confidence 78999999999999999999999999999999999997643
No 23
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.76 E-value=6.2e-18 Score=149.57 Aligned_cols=118 Identities=18% Similarity=0.269 Sum_probs=106.0
Q ss_pred HHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc-cC
Q 018346 118 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-AS 196 (357)
Q Consensus 118 l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~ 196 (357)
...+++.+.+.++.+|||+|||+|..+..+++.. .+|+|+|+|+.+++.+++++...+.++++++.+|+.+++++ ++
T Consensus 10 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 87 (239)
T 1xxl_A 10 LGLMIKTAECRAEHRVLDIGAGAGHTALAFSPYV--QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDS 87 (239)
T ss_dssp HHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTC
T ss_pred cchHHHHhCcCCCCEEEEEccCcCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCc
Confidence 3456677788899999999999999999999874 59999999999999999999888877899999999887765 78
Q ss_pred ccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEeccCC
Q 018346 197 YDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 197 fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 237 (357)
||+|+++.+++|+++...+++++.++|||||++++..+..+
T Consensus 88 fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 128 (239)
T 1xxl_A 88 FDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYAP 128 (239)
T ss_dssp EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECBC
T ss_pred EEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCCC
Confidence 99999999999999999999999999999999999876554
No 24
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.76 E-value=7.7e-19 Score=162.07 Aligned_cols=177 Identities=14% Similarity=0.113 Sum_probs=130.2
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCC-CcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-
Q 018346 116 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM- 193 (357)
Q Consensus 116 ~~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~- 193 (357)
.....+++.+.+.++.+|||+|||+|.++..+++..+ +.+|+|+|+|+.+++.|++++...++++++++.+|+.+...
T Consensus 62 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~ 141 (317)
T 1dl5_A 62 SLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPE 141 (317)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG
T ss_pred HHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhcccc
Confidence 3556677777888899999999999999999998875 47899999999999999999999888789999999987543
Q ss_pred ccCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEeccCC--CCCcccccCCccchhhhcccCCCCCCCHHHHHhh
Q 018346 194 EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHK--TFAYHFEDTNDDDWITKYFFTGGTMPSANLLLYF 271 (357)
Q Consensus 194 ~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 271 (357)
.++||+|+++.+++++. +.+.+.|||||++++...+.. .............|..++++|.+.+|........
T Consensus 142 ~~~fD~Iv~~~~~~~~~------~~~~~~LkpgG~lvi~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~~~ 215 (317)
T 1dl5_A 142 FSPYDVIFVTVGVDEVP------ETWFTQLKEGGRVIVPINLKLSRRQPAFLFKKKDPYLVGNYKLETRFITAGGNLGNL 215 (317)
T ss_dssp GCCEEEEEECSBBSCCC------HHHHHHEEEEEEEEEEBCBGGGTBCEEEEEEEETTEEEEEEEEECCCCBCCGGGSCH
T ss_pred CCCeEEEEEcCCHHHHH------HHHHHhcCCCcEEEEEECCCCcccceEEEEEEeCCcEEEEEeccEEEEEccCccccc
Confidence 37899999999999886 467889999999999876543 1111111112346888899998888775433221
Q ss_pred c-CCcEEEEeEEecCccHHHHHHHHHH-HHHhcH
Q 018346 272 Q-DDVSVVDHWLVNGKHYAQTSEEWLK-RMDNNL 303 (357)
Q Consensus 272 ~-~~~~~~~~w~~~g~~y~~tl~~w~~-~l~~~~ 303 (357)
. .....+. ...|.+|++.|.. ++.+..
T Consensus 216 ~~~~~~~~~-----~~~y~~tl~~~~~~~f~~~~ 244 (317)
T 1dl5_A 216 LERNRKLLR-----EFPFNREILLVRSHIFVELV 244 (317)
T ss_dssp HHHHHTTCC-----CCCEEEEEECTTHHHHHHHH
T ss_pred cccchhhhh-----cccchhhccCcchhhhhhhh
Confidence 1 1111111 1226677888886 666443
No 25
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.76 E-value=8.1e-18 Score=148.08 Aligned_cols=118 Identities=24% Similarity=0.354 Sum_probs=101.9
Q ss_pred HHHHHHcC-CCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccccCc
Q 018346 119 ELYCERSR-LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASY 197 (357)
Q Consensus 119 ~~l~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~f 197 (357)
..+++.+. ..++.+|||+|||+|..+..+++.+|+.+|+|+|+|+.+++.|++++...+ +++++++|+.+.+++++|
T Consensus 33 ~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~d~~~~~~~~~f 110 (234)
T 3dtn_A 33 GVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL--KVKYIEADYSKYDFEEKY 110 (234)
T ss_dssp HHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT--TEEEEESCTTTCCCCSCE
T ss_pred HHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC--CEEEEeCchhccCCCCCc
Confidence 34444444 456789999999999999999999989999999999999999999876554 899999999987766889
Q ss_pred cEEEEcccccchhhHH--HHHHHHHHhcccCceEEEEeccCCC
Q 018346 198 DRIYSIEMFEHMKNYQ--NLLKKISKWMKEDTLLFVHHFCHKT 238 (357)
Q Consensus 198 D~Ii~~~~~~~~~~~~--~~l~~~~~~LkpgG~l~~~~~~~~~ 238 (357)
|+|+++.+++++++.. .+++++.++|||||.+++.++....
T Consensus 111 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 153 (234)
T 3dtn_A 111 DMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGE 153 (234)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCS
T ss_pred eEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCC
Confidence 9999999999996554 5999999999999999998876654
No 26
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.75 E-value=9.8e-18 Score=145.93 Aligned_cols=115 Identities=19% Similarity=0.293 Sum_probs=96.6
Q ss_pred HHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-----CeEEEEeccCCCcc
Q 018346 119 ELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-----NVEIIVADISTFEM 193 (357)
Q Consensus 119 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~-----~v~~~~~d~~~~~~ 193 (357)
+.+++.+...++.+|||+|||+|.++..+++..|..+|+|+|+|+.+++.|++++...+++ +++++++|+...+.
T Consensus 19 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 98 (217)
T 3jwh_A 19 NGVVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDK 98 (217)
T ss_dssp HHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCG
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccc
Confidence 3344444445678999999999999999999877789999999999999999998777664 79999999976654
Q ss_pred c-cCccEEEEcccccchhhH--HHHHHHHHHhcccCceEEEEe
Q 018346 194 E-ASYDRIYSIEMFEHMKNY--QNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 194 ~-~~fD~Ii~~~~~~~~~~~--~~~l~~~~~~LkpgG~l~~~~ 233 (357)
. ++||+|+++.+++|+++. ..+++++.++|||||.+++..
T Consensus 99 ~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 99 RFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp GGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred cCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 4 789999999999999644 899999999999999666543
No 27
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.75 E-value=8.3e-18 Score=152.68 Aligned_cols=117 Identities=21% Similarity=0.359 Sum_probs=103.9
Q ss_pred HHHHHHHc-CCCCCCEEEEECCcccHHHHHHHHHCC-CcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcccc
Q 018346 118 LELYCERS-RLEDGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEA 195 (357)
Q Consensus 118 l~~l~~~~-~~~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 195 (357)
+..+++.+ .+.++.+|||+|||+|..+..+++.+| +.+|+|+|+|+.+++.|++++...+. +++++++|+.+++.++
T Consensus 10 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~~ 88 (284)
T 3gu3_A 10 VSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY-DSEFLEGDATEIELND 88 (284)
T ss_dssp HHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS-EEEEEESCTTTCCCSS
T ss_pred HHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcchhhcCcCC
Confidence 33344433 456789999999999999999999887 48999999999999999999887766 8999999999877668
Q ss_pred CccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEecc
Q 018346 196 SYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFC 235 (357)
Q Consensus 196 ~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 235 (357)
+||+|+++.+++++++...+++++.++|||||++++..+.
T Consensus 89 ~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 89 KYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp CEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 8999999999999999999999999999999999998876
No 28
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.75 E-value=6.6e-18 Score=147.13 Aligned_cols=105 Identities=21% Similarity=0.285 Sum_probs=93.4
Q ss_pred CCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccccCccEEEEcccc
Q 018346 127 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMF 206 (357)
Q Consensus 127 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~Ii~~~~~ 206 (357)
..++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++.. ++++++.+|+.+++.+++||+|+++.++
T Consensus 43 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~d~~~~~~~~~fD~v~~~~~l 116 (220)
T 3hnr_A 43 NKSFGNVLEFGVGTGNLTNKLLLA--GRTVYGIEPSREMRMIAKEKLP----KEFSITEGDFLSFEVPTSIDTIVSTYAF 116 (220)
T ss_dssp HTCCSEEEEECCTTSHHHHHHHHT--TCEEEEECSCHHHHHHHHHHSC----TTCCEESCCSSSCCCCSCCSEEEEESCG
T ss_pred ccCCCeEEEeCCCCCHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCC----CceEEEeCChhhcCCCCCeEEEEECcch
Confidence 347889999999999999999987 7899999999999999988765 3789999999987655889999999999
Q ss_pred cchhhHHH--HHHHHHHhcccCceEEEEeccCC
Q 018346 207 EHMKNYQN--LLKKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 207 ~~~~~~~~--~l~~~~~~LkpgG~l~~~~~~~~ 237 (357)
+++++... +++++.++|||||.+++.++...
T Consensus 117 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 149 (220)
T 3hnr_A 117 HHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFA 149 (220)
T ss_dssp GGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBS
T ss_pred hcCChHHHHHHHHHHHHhcCCCCEEEEEecccc
Confidence 99987766 99999999999999999876543
No 29
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.75 E-value=6.5e-18 Score=160.55 Aligned_cols=209 Identities=15% Similarity=0.160 Sum_probs=139.2
Q ss_pred HHhHhcCCCCHHHHH---HHHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHhccCCccccchhhhhhhcCCChHH------
Q 018346 17 LSSLERNLLPDAVIR---RLSRLLLGGRLRSGYKPSAELQLSDLLQFAHSLREMPIAIQTDKAKEQHYELPTSF------ 87 (357)
Q Consensus 17 ~~~~~~~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~y~~~~~~------ 87 (357)
.+.++.+..|+..++ ..++..+..++.....+..+........++++++..++..+. ...+.++..+
T Consensus 123 ~~~~~~~~lpd~~~~~~~~~i~~~~~~~l~~~~~~~f~~~~~~~~~~~~~Lr~~~I~~vl----~a~~~vPr~~~e~il~ 198 (433)
T 1u2z_A 123 IEYSCLVFLPSPYAEQLKETILPDLNASFDNSDTKGFVNAINLYNKMIREIPRQRIIDHL----ETIDKIPRSFIHDFLH 198 (433)
T ss_dssp HHHHHHTTCCTTHHHHHHHHTHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCHHHHHHHH----TTCCEEEHHHHHHHHH
T ss_pred HHHHHhcCCChHHHHHHHHHHHHHHHHHhhhhchhhHHHHHHHHHHHHHHHhhccHHHHH----HHHHhCCHHHHHHHHH
Confidence 345566777887776 566777767776666655666666666666666444433221 2223333332
Q ss_pred --HHHhhcCCCCccccc--cCC--CCCCHHHHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcC
Q 018346 88 --FKLVLGKYFKYSCCY--FSD--ASKTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICN 161 (357)
Q Consensus 88 --~~~~l~~~~~y~~~~--f~~--~~~~l~~~~~~~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~ 161 (357)
|...+.|...+...+ |.+ ..+.. ...+..+++.+.+.++.+|||||||+|.++..+++..+..+|+|+|+
T Consensus 199 ~aY~~~l~P~~~~l~~Y~~~s~~~yGet~----p~~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDi 274 (433)
T 1u2z_A 199 IVYTRSIHPQANKLKHYKAFSNYVYGELL----PNFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEI 274 (433)
T ss_dssp HHHHHHTGGGGGGGCSCCSSGGGCCCCBC----HHHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEEC
T ss_pred HHHHhhccccHHHHHHhhhcccccccccc----HHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeC
Confidence 322232211111111 000 01122 23455677777888899999999999999999999876679999999
Q ss_pred CHHHHHHH-------HHHHHHcC--CCCeEEEEeccCCC--cc---ccCccEEEEcccccchhhHHHHHHHHHHhcccCc
Q 018346 162 SKTQKEFI-------EEQCRVLE--LQNVEIIVADISTF--EM---EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDT 227 (357)
Q Consensus 162 s~~~l~~a-------~~~~~~~~--~~~v~~~~~d~~~~--~~---~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG 227 (357)
|+.+++.| ++++...| .++++++++|.... ++ .++||+|+++.++ +.++....++++.+.|||||
T Consensus 275 s~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~~~~~FDvIvvn~~l-~~~d~~~~L~el~r~LKpGG 353 (433)
T 1u2z_A 275 MDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAELIPQCDVILVNNFL-FDEDLNKKVEKILQTAKVGC 353 (433)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHHHGGGCSEEEECCTT-CCHHHHHHHHHHHTTCCTTC
T ss_pred CHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccccccccccccCCCCEEEEeCcc-ccccHHHHHHHHHHhCCCCe
Confidence 99999998 88888888 46899999865432 11 2689999998766 34678888999999999999
Q ss_pred eEEEEec
Q 018346 228 LLFVHHF 234 (357)
Q Consensus 228 ~l~~~~~ 234 (357)
.+++..+
T Consensus 354 ~lVi~d~ 360 (433)
T 1u2z_A 354 KIISLKS 360 (433)
T ss_dssp EEEESSC
T ss_pred EEEEeec
Confidence 9998643
No 30
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.75 E-value=4.2e-17 Score=140.56 Aligned_cols=117 Identities=15% Similarity=0.225 Sum_probs=102.4
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc-c
Q 018346 117 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-A 195 (357)
Q Consensus 117 ~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~ 195 (357)
....++..+.+.++.+|||+|||+|.++..+++..|..+|+++|+|+.+++.|++++...++++++++.+|+.+.... +
T Consensus 28 i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 107 (204)
T 3e05_A 28 VRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLP 107 (204)
T ss_dssp HHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSC
T ss_pred HHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCC
Confidence 334566777888899999999999999999999988899999999999999999999998888899999999765433 6
Q ss_pred CccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 196 SYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 196 ~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
+||+|+++.+++ +...+++++.++|+|||++++..+..
T Consensus 108 ~~D~i~~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~ 145 (204)
T 3e05_A 108 DPDRVFIGGSGG---MLEEIIDAVDRRLKSEGVIVLNAVTL 145 (204)
T ss_dssp CCSEEEESCCTT---CHHHHHHHHHHHCCTTCEEEEEECBH
T ss_pred CCCEEEECCCCc---CHHHHHHHHHHhcCCCeEEEEEeccc
Confidence 799999998876 67899999999999999999976653
No 31
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.75 E-value=6.1e-18 Score=153.48 Aligned_cols=117 Identities=15% Similarity=0.177 Sum_probs=102.5
Q ss_pred HHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEEeccCCCc-c-c
Q 018346 118 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFE-M-E 194 (357)
Q Consensus 118 l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~-~-~ 194 (357)
+..++..+... +.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|++++...++ ++++++++|+.+++ . .
T Consensus 58 l~~~l~~~~~~-~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 134 (285)
T 4htf_A 58 LDRVLAEMGPQ-KLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLE 134 (285)
T ss_dssp HHHHHHHTCSS-CCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCS
T ss_pred HHHHHHhcCCC-CCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcC
Confidence 44556655543 679999999999999999987 78999999999999999999988887 58999999999876 3 3
Q ss_pred cCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEeccCC
Q 018346 195 ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 195 ~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 237 (357)
++||+|+++.+++|++++..+++++.++|||||.+++..++..
T Consensus 135 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 177 (285)
T 4htf_A 135 TPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAH 177 (285)
T ss_dssp SCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEBHH
T ss_pred CCceEEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEeCCc
Confidence 7899999999999999999999999999999999999887653
No 32
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.75 E-value=1.1e-17 Score=145.64 Aligned_cols=115 Identities=21% Similarity=0.323 Sum_probs=95.8
Q ss_pred HHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-----CeEEEEeccCCCc
Q 018346 118 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-----NVEIIVADISTFE 192 (357)
Q Consensus 118 l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~-----~v~~~~~d~~~~~ 192 (357)
++.+.+.+...++.+|||+|||+|.++..+++..|..+|+|+|+|+.+++.|++++...+++ +++++.+|+...+
T Consensus 18 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 97 (219)
T 3jwg_A 18 LGTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRD 97 (219)
T ss_dssp HHHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCC
T ss_pred HHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccc
Confidence 33344444345678999999999999999998877789999999999999999998776653 7999999997765
Q ss_pred cc-cCccEEEEcccccchhhH--HHHHHHHHHhcccCceEEEE
Q 018346 193 ME-ASYDRIYSIEMFEHMKNY--QNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 193 ~~-~~fD~Ii~~~~~~~~~~~--~~~l~~~~~~LkpgG~l~~~ 232 (357)
.. ++||+|+++.+++|+++. ..+++++.++|||||.++..
T Consensus 98 ~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 140 (219)
T 3jwg_A 98 KRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVST 140 (219)
T ss_dssp GGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred cccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEc
Confidence 44 789999999999999754 79999999999999955443
No 33
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.75 E-value=2.2e-17 Score=141.27 Aligned_cols=114 Identities=19% Similarity=0.312 Sum_probs=99.6
Q ss_pred HHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccccCccEE
Q 018346 121 YCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRI 200 (357)
Q Consensus 121 l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~I 200 (357)
+++.+...++.+|||+|||+|..+..+++. +.+|+|+|+|+.+++.+++++...+.++++++.+|+.+.+..++||+|
T Consensus 24 l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v 101 (199)
T 2xvm_A 24 VLEAVKVVKPGKTLDLGCGNGRNSLYLAAN--GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQYDFI 101 (199)
T ss_dssp HHHHTTTSCSCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCCCCCEEEE
T ss_pred HHHHhhccCCCeEEEEcCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCCCCCceEE
Confidence 334445557789999999999999999987 779999999999999999999888877899999999887656789999
Q ss_pred EEcccccchh--hHHHHHHHHHHhcccCceEEEEeccC
Q 018346 201 YSIEMFEHMK--NYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 201 i~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
+++.++++++ +...+++++.++|||||.+++..+..
T Consensus 102 ~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (199)
T 2xvm_A 102 LSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMD 139 (199)
T ss_dssp EEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBC
T ss_pred EEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeec
Confidence 9999999986 88999999999999999988765533
No 34
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.74 E-value=1.4e-17 Score=149.71 Aligned_cols=182 Identities=15% Similarity=0.111 Sum_probs=120.9
Q ss_pred cCCCCHHHHHHHHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHhccCCccccchhhhhhhcCCChHHHHHhhcCCCCcccc
Q 018346 22 RNLLPDAVIRRLSRLLLGGRLRSGYKPSAELQLSDLLQFAHSLREMPIAIQTDKAKEQHYELPTSFFKLVLGKYFKYSCC 101 (357)
Q Consensus 22 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~y~~~~~~~~~~l~~~~~y~~~ 101 (357)
.|+......+.++..++..++....-+.+.+.+..+. ... .++.-..+...+. .+.+
T Consensus 28 ~Gi~~~~~k~~~~~~Rl~~r~~~~~~~~~~~y~~~l~-------~~~-----------~~~e~~~l~~~lt-----~~~t 84 (274)
T 1af7_A 28 AGIVLADHKRDMVYNRLVRRLRALGLDDFGRYLSMLE-------ANQ-----------NSAEWQAFINALT-----TNLT 84 (274)
T ss_dssp HCCCCCGGGHHHHHHHHHHHHHHHTCCCHHHHHHHHH-------HCT-----------TCTHHHHHHHHHC-----CCCC
T ss_pred HCCCCchhhHHHHHHHHHHHHHHcCCCCHHHHHHHHc-------cCC-----------CHHHHHHHHHHHh-----hcCc
Confidence 4777666677777777777776655545544444332 100 0111112222222 2224
Q ss_pred ccCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEECCcccH----HHHHHHHHCC----CcEEEEEcCCHHHHHHHHHHH
Q 018346 102 YFSDASKTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGS----LSLYIAQKYS----NCKITGICNSKTQKEFIEEQC 173 (357)
Q Consensus 102 ~f~~~~~~l~~~~~~~l~~l~~~~~~~~~~~vLDiGcG~G~----~~~~la~~~p----~~~v~~vD~s~~~l~~a~~~~ 173 (357)
.|.++...+......++.. .++.+|||+|||+|. +++.+++..| +.+|+|+|+|+.+++.|++++
T Consensus 85 ~FfRd~~~f~~l~~~llp~-------~~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~ 157 (274)
T 1af7_A 85 AFFREAHHFPILAEHARRR-------HGEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGI 157 (274)
T ss_dssp CTTTTTTHHHHHHHHHHHS-------CSCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTE
T ss_pred cccCChHHHHHHHHHccCC-------CCCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcC
Confidence 5555555555443333322 245799999999998 6677777644 469999999999999999874
Q ss_pred HH-----------------------cC-------C-CCeEEEEeccCCCccc--cCccEEEEcccccchhh--HHHHHHH
Q 018346 174 RV-----------------------LE-------L-QNVEIIVADISTFEME--ASYDRIYSIEMFEHMKN--YQNLLKK 218 (357)
Q Consensus 174 ~~-----------------------~~-------~-~~v~~~~~d~~~~~~~--~~fD~Ii~~~~~~~~~~--~~~~l~~ 218 (357)
.. .+ + ++|.|.++|+.+.+++ ++||+|+|..+++|+++ ..+++++
T Consensus 158 y~~~~~~~~~~~~~~~~f~~~~~~~~~~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~ 237 (274)
T 1af7_A 158 YRLSELKTLSPQQLQRYFMRGTGPHEGLVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRR 237 (274)
T ss_dssp EEGGGGTTSCHHHHHHHEEECCTTSCSEEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHH
T ss_pred CchhhhhcCCHHHHHHHhhccccCCCCceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHH
Confidence 10 01 0 2699999999885433 68999999999999954 4889999
Q ss_pred HHHhcccCceEEEEe
Q 018346 219 ISKWMKEDTLLFVHH 233 (357)
Q Consensus 219 ~~~~LkpgG~l~~~~ 233 (357)
+.+.|+|||++++..
T Consensus 238 ~~~~L~pgG~L~lg~ 252 (274)
T 1af7_A 238 FVPLLKPDGLLFAGH 252 (274)
T ss_dssp HGGGEEEEEEEEECT
T ss_pred HHHHhCCCcEEEEEe
Confidence 999999999999843
No 35
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.74 E-value=4e-17 Score=139.00 Aligned_cols=110 Identities=15% Similarity=0.238 Sum_probs=96.7
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc---ccCccEEEEcc
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM---EASYDRIYSIE 204 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~---~~~fD~Ii~~~ 204 (357)
.++.+|||+|||+|.++..++.. +..+|+|+|+|+.+++.|++++...++++++++++|+.+... .++||+|++++
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~ 121 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR-GAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADP 121 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECC
Confidence 46789999999999999988875 356899999999999999999999888789999999987532 37899999999
Q ss_pred cccch-hhHHHHHHHHHH--hcccCceEEEEeccCCC
Q 018346 205 MFEHM-KNYQNLLKKISK--WMKEDTLLFVHHFCHKT 238 (357)
Q Consensus 205 ~~~~~-~~~~~~l~~~~~--~LkpgG~l~~~~~~~~~ 238 (357)
++++. ++...+++.+.+ +|+|||.++++......
T Consensus 122 p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~~ 158 (189)
T 3p9n_A 122 PYNVDSADVDAILAALGTNGWTREGTVAVVERATTCA 158 (189)
T ss_dssp CTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETTSC
T ss_pred CCCcchhhHHHHHHHHHhcCccCCCeEEEEEecCCCC
Confidence 98885 788999999999 99999999998876544
No 36
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.74 E-value=9.7e-18 Score=149.73 Aligned_cols=115 Identities=21% Similarity=0.275 Sum_probs=102.2
Q ss_pred HHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccccCc
Q 018346 118 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASY 197 (357)
Q Consensus 118 l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~f 197 (357)
...+++.+...++.+|||+|||+|..+..+++.+|+.+|+|+|+|+.+++.++++ .++++++.+|+.+++..++|
T Consensus 22 ~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~~~~f 96 (259)
T 2p35_A 22 ARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR-----LPNTNFGKADLATWKPAQKA 96 (259)
T ss_dssp HHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH-----STTSEEEECCTTTCCCSSCE
T ss_pred HHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh-----CCCcEEEECChhhcCccCCc
Confidence 3456677777788999999999999999999998889999999999999999887 23899999999987744789
Q ss_pred cEEEEcccccchhhHHHHHHHHHHhcccCceEEEEeccCC
Q 018346 198 DRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 198 D~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 237 (357)
|+|+++.+++++++...+++++.++|||||.+++.++...
T Consensus 97 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 136 (259)
T 2p35_A 97 DLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMPDNL 136 (259)
T ss_dssp EEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEECCT
T ss_pred CEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeCCCC
Confidence 9999999999999999999999999999999999987553
No 37
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.73 E-value=8.5e-17 Score=139.64 Aligned_cols=105 Identities=12% Similarity=0.152 Sum_probs=93.3
Q ss_pred CCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccccCccEEEEcccc
Q 018346 127 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMF 206 (357)
Q Consensus 127 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~Ii~~~~~ 206 (357)
..++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++ .+.++++++++|+.++...++||+|+++.++
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~----~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~l 117 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGL--ADRVTALDGSAEMIAEAGR----HGLDNVEFRQQDLFDWTPDRQWDAVFFAHWL 117 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHGG----GCCTTEEEEECCTTSCCCSSCEEEEEEESCG
T ss_pred CCCCCeEEEECCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHh----cCCCCeEEEecccccCCCCCceeEEEEechh
Confidence 456789999999999999999988 7899999999999999887 4556899999999887334889999999999
Q ss_pred cchhhH--HHHHHHHHHhcccCceEEEEeccCC
Q 018346 207 EHMKNY--QNLLKKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 207 ~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~ 237 (357)
+|+++. ..+++++.++|||||.+++.+++.+
T Consensus 118 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 150 (218)
T 3ou2_A 118 AHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDH 150 (218)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred hcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCC
Confidence 999774 8999999999999999999988763
No 38
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.73 E-value=9.1e-18 Score=148.49 Aligned_cols=162 Identities=17% Similarity=0.244 Sum_probs=118.5
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCC--ccc-cCccEEEEcc
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF--EME-ASYDRIYSIE 204 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~--~~~-~~fD~Ii~~~ 204 (357)
.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++ ++++.+|+.+. +++ ++||+|+++.
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~--------~~~~~~d~~~~~~~~~~~~fD~i~~~~ 109 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEE--GIESIGVDINEDMIKFCEGK--------FNVVKSDAIEYLKSLPDKYLDGVMISH 109 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHH--TCCEEEECSCHHHHHHHHTT--------SEEECSCHHHHHHTSCTTCBSEEEEES
T ss_pred cCCCeEEEEeCCCCHHHHHHHhC--CCcEEEEECCHHHHHHHHhh--------cceeeccHHHHhhhcCCCCeeEEEECC
Confidence 46789999999999999999988 67899999999999888764 78888888764 333 7899999999
Q ss_pred cccchh--hHHHHHHHHHHhcccCceEEEEeccCCCCCcccccCCccchhhhcccCCC-CCCCHHHHHhh-c-CCcEEEE
Q 018346 205 MFEHMK--NYQNLLKKISKWMKEDTLLFVHHFCHKTFAYHFEDTNDDDWITKYFFTGG-TMPSANLLLYF-Q-DDVSVVD 279 (357)
Q Consensus 205 ~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~-~-~~~~~~~ 279 (357)
+++|++ +...+++++.++|||||++++.+++.... ..+...+..+.. ...+...+... . .++..++
T Consensus 110 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~ 180 (240)
T 3dli_A 110 FVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSL---------YSLINFYIDPTHKKPVHPETLKFILEYLGFRDVK 180 (240)
T ss_dssp CGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSH---------HHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEEE
T ss_pred chhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchh---------HHHHHHhcCccccccCCHHHHHHHHHHCCCeEEE
Confidence 999997 66999999999999999999998875432 112222233332 23343444333 2 3666555
Q ss_pred eEEec---------CccHHHHHHHHHHH-HHhcHHHHHHH
Q 018346 280 HWLVN---------GKHYAQTSEEWLKR-MDNNLASIKPI 309 (357)
Q Consensus 280 ~w~~~---------g~~y~~tl~~w~~~-l~~~~~~~~~~ 309 (357)
..... +.+ .+++..|.++ +.++...+.++
T Consensus 181 ~~~~~~~~~~~~l~~~~-~~~l~~w~~~~~~~~~~~~~~~ 219 (240)
T 3dli_A 181 IEFFEECEELTKLAKID-SNTVSEEVIRVINENIEKLNRI 219 (240)
T ss_dssp EEEECCCCTTTSCCCCC-CSSSCHHHHHHHHHHHHHHHHH
T ss_pred EEEeccCcccccccccc-cccccHHHHHhhhhhHHHHHhh
Confidence 44332 133 5678899998 77777666655
No 39
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.73 E-value=1.1e-17 Score=158.28 Aligned_cols=111 Identities=22% Similarity=0.269 Sum_probs=98.1
Q ss_pred CCCCCEEEEECCcccHHHHHHHHHC-CCcEEEEEcCCHHHHHHHHHHHHHc-----C-C--CCeEEEEeccCCC------
Q 018346 127 LEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVL-----E-L--QNVEIIVADISTF------ 191 (357)
Q Consensus 127 ~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~~vD~s~~~l~~a~~~~~~~-----~-~--~~v~~~~~d~~~~------ 191 (357)
..++.+|||+|||+|..+..+++.+ |+.+|+|+|+|+.+++.|++++... | . ++++|+++|+.++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 4478899999999999999999886 6789999999999999999988754 3 2 4899999999886
Q ss_pred ccc-cCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEeccCC
Q 018346 192 EME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 192 ~~~-~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 237 (357)
+++ ++||+|+++.++++++++..+++++.++|||||++++..+...
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~ 207 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYAD 207 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEES
T ss_pred CCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEeccc
Confidence 444 7899999999999999999999999999999999999876543
No 40
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.73 E-value=1.7e-17 Score=144.69 Aligned_cols=108 Identities=10% Similarity=0.100 Sum_probs=91.6
Q ss_pred CCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCC-c--c-ccCccEEEEcc
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF-E--M-EASYDRIYSIE 204 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~-~--~-~~~fD~Ii~~~ 204 (357)
++.+|||||||+|.++..+++..|+..|+|+|+|+.+++.|++++...+++|+.++++|+.++ + + +++||.|+++.
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 567999999999999999999999999999999999999999999999988999999998774 2 2 37899999984
Q ss_pred cccch--hhH------HHHHHHHHHhcccCceEEEEeccC
Q 018346 205 MFEHM--KNY------QNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 205 ~~~~~--~~~------~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
+..+. ... ..+++.+.++|||||.+++.+...
T Consensus 114 ~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~ 153 (218)
T 3dxy_A 114 PDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWE 153 (218)
T ss_dssp CCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCH
T ss_pred CCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCH
Confidence 43322 221 259999999999999999987543
No 41
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.73 E-value=2e-17 Score=147.33 Aligned_cols=107 Identities=12% Similarity=0.163 Sum_probs=90.6
Q ss_pred CCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHH-----------------cCCCCeEEEEeccC
Q 018346 127 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRV-----------------LELQNVEIIVADIS 189 (357)
Q Consensus 127 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~-----------------~~~~~v~~~~~d~~ 189 (357)
..++.+|||+|||+|..+..|++. +.+|+|+|+|+.+++.|+++... ....+|+|+++|+.
T Consensus 66 ~~~~~~vLD~GCG~G~~~~~La~~--G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~ 143 (252)
T 2gb4_A 66 GQSGLRVFFPLCGKAIEMKWFADR--GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIF 143 (252)
T ss_dssp TCCSCEEEETTCTTCTHHHHHHHT--TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTT
T ss_pred CCCCCeEEEeCCCCcHHHHHHHHC--CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccc
Confidence 346789999999999999999987 78999999999999999876531 01238999999999
Q ss_pred CCccc--cCccEEEEcccccchh--hHHHHHHHHHHhcccCceEEEEecc
Q 018346 190 TFEME--ASYDRIYSIEMFEHMK--NYQNLLKKISKWMKEDTLLFVHHFC 235 (357)
Q Consensus 190 ~~~~~--~~fD~Ii~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~ 235 (357)
++++. ++||+|+++.++++++ +...+++++.++|||||++++.+..
T Consensus 144 ~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~ 193 (252)
T 2gb4_A 144 DLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLS 193 (252)
T ss_dssp TGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred cCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEe
Confidence 98764 7899999999999883 4678999999999999999766554
No 42
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.72 E-value=4.5e-17 Score=144.91 Aligned_cols=102 Identities=15% Similarity=0.193 Sum_probs=91.1
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc----ccCccEEEEc
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----EASYDRIYSI 203 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~----~~~fD~Ii~~ 203 (357)
.++.+|||||||+|..++.++..+|+.+|+++|+|+.+++.|++++...++++|+++++|+.+++. .++||+|+|+
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 467899999999999999999998999999999999999999999999998789999999987643 2689999997
Q ss_pred ccccchhhHHHHHHHHHHhcccCceEEEEe
Q 018346 204 EMFEHMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 204 ~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
.+ .+...+++.+.++|||||++++..
T Consensus 159 a~----~~~~~ll~~~~~~LkpgG~l~~~~ 184 (249)
T 3g89_A 159 AV----APLCVLSELLLPFLEVGGAAVAMK 184 (249)
T ss_dssp SS----CCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred Cc----CCHHHHHHHHHHHcCCCeEEEEEe
Confidence 54 456889999999999999988754
No 43
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.72 E-value=5.7e-17 Score=136.25 Aligned_cols=115 Identities=13% Similarity=0.078 Sum_probs=97.8
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCC-ccc
Q 018346 117 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTF-EME 194 (357)
Q Consensus 117 ~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~-~~~ 194 (357)
....+++.+...++.+|||+|||+|.++..+++.+|+.+|+++|+|+.+++.|++++...+.+ ++ ++.+|..+. +..
T Consensus 13 ~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~ 91 (178)
T 3hm2_A 13 VRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDV 91 (178)
T ss_dssp HHHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGC
T ss_pred HHHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhcc
Confidence 344566667778889999999999999999999888899999999999999999999988886 88 888888553 222
Q ss_pred -cCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 195 -ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 195 -~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
++||+|+++.++++ ..+++++.++|||||.+++..++.
T Consensus 92 ~~~~D~i~~~~~~~~----~~~l~~~~~~L~~gG~l~~~~~~~ 130 (178)
T 3hm2_A 92 PDNPDVIFIGGGLTA----PGVFAAAWKRLPVGGRLVANAVTV 130 (178)
T ss_dssp CSCCSEEEECC-TTC----TTHHHHHHHTCCTTCEEEEEECSH
T ss_pred CCCCCEEEECCcccH----HHHHHHHHHhcCCCCEEEEEeecc
Confidence 68999999999877 678999999999999999987654
No 44
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.72 E-value=2.3e-17 Score=143.36 Aligned_cols=110 Identities=14% Similarity=0.148 Sum_probs=96.2
Q ss_pred HHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccccCccEEEE
Q 018346 123 ERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYS 202 (357)
Q Consensus 123 ~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~Ii~ 202 (357)
..+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++....+ +++++++|+.+.+..++||+|++
T Consensus 45 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~d~~~~~~~~~fD~v~~ 120 (216)
T 3ofk_A 45 LSLSSGAVSNGLEIGCAAGAFTEKLAPH--CKRLTVIDVMPRAIGRACQRTKRWS--HISWAATDILQFSTAELFDLIVV 120 (216)
T ss_dssp HHTTTSSEEEEEEECCTTSHHHHHHGGG--EEEEEEEESCHHHHHHHHHHTTTCS--SEEEEECCTTTCCCSCCEEEEEE
T ss_pred HHcccCCCCcEEEEcCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHhcccCC--CeEEEEcchhhCCCCCCccEEEE
Confidence 3455567789999999999999999987 5799999999999999999876543 89999999998775588999999
Q ss_pred cccccchhhH---HHHHHHHHHhcccCceEEEEeccC
Q 018346 203 IEMFEHMKNY---QNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 203 ~~~~~~~~~~---~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
+.+++|+++. ..+++++.++|||||.+++.++..
T Consensus 121 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 121 AEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSARD 157 (216)
T ss_dssp ESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred ccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 9999999766 577999999999999999987754
No 45
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.72 E-value=3.4e-17 Score=148.13 Aligned_cols=111 Identities=23% Similarity=0.334 Sum_probs=98.2
Q ss_pred HHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccccCccEE
Q 018346 121 YCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRI 200 (357)
Q Consensus 121 l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~I 200 (357)
+++.+...++.+|||+|||+|..+..+++ ++.+|+|+|+|+.+++.++++. +++.+..+|+.+++++++||+|
T Consensus 49 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~~~~fD~v 121 (279)
T 3ccf_A 49 LLQLLNPQPGEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKARQNY-----PHLHFDVADARNFRVDKPLDAV 121 (279)
T ss_dssp HHHHHCCCTTCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHHC-----TTSCEEECCTTTCCCSSCEEEE
T ss_pred HHHHhCCCCCCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHhhC-----CCCEEEECChhhCCcCCCcCEE
Confidence 44455667889999999999999999998 5889999999999999998765 3789999999987766889999
Q ss_pred EEcccccchhhHHHHHHHHHHhcccCceEEEEeccCCC
Q 018346 201 YSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHKT 238 (357)
Q Consensus 201 i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 238 (357)
+++.++++++++..+++++.++|||||++++..+....
T Consensus 122 ~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~~~~ 159 (279)
T 3ccf_A 122 FSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGGKGN 159 (279)
T ss_dssp EEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECTTT
T ss_pred EEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEecCCcc
Confidence 99999999999999999999999999999998876543
No 46
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.72 E-value=8.3e-17 Score=143.16 Aligned_cols=118 Identities=15% Similarity=0.320 Sum_probs=99.5
Q ss_pred HHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc
Q 018346 115 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME 194 (357)
Q Consensus 115 ~~~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~ 194 (357)
...+..++......++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++....+. +++++++|+.+++.+
T Consensus 27 ~~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~-~v~~~~~d~~~~~~~ 103 (252)
T 1wzn_A 27 IDFVEEIFKEDAKREVRRVLDLACGTGIPTLELAER--GYEVVGLDLHEEMLRVARRKAKERNL-KIEFLQGDVLEIAFK 103 (252)
T ss_dssp HHHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTC-CCEEEESCGGGCCCC
T ss_pred HHHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhcCC-ceEEEECChhhcccC
Confidence 345566666666667789999999999999999987 78999999999999999999988776 899999999987666
Q ss_pred cCccEEEEcc-cccch--hhHHHHHHHHHHhcccCceEEEEecc
Q 018346 195 ASYDRIYSIE-MFEHM--KNYQNLLKKISKWMKEDTLLFVHHFC 235 (357)
Q Consensus 195 ~~fD~Ii~~~-~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~ 235 (357)
++||+|++.. .++++ ++...+++++.++|+|||.+++..++
T Consensus 104 ~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 104 NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 7899999864 33333 56788999999999999999998765
No 47
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.71 E-value=1.2e-16 Score=135.77 Aligned_cols=116 Identities=15% Similarity=0.320 Sum_probs=101.6
Q ss_pred HHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCC--eEEEEeccCCCccccC
Q 018346 119 ELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQN--VEIIVADISTFEMEAS 196 (357)
Q Consensus 119 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~--v~~~~~d~~~~~~~~~ 196 (357)
..+++.+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++...++++ ++++.+|+.+....++
T Consensus 42 ~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 119 (194)
T 1dus_A 42 KILVENVVVDKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVKDRK 119 (194)
T ss_dssp HHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCTTSC
T ss_pred HHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccccCC
Confidence 34566667778899999999999999999987 7899999999999999999999888865 9999999987543478
Q ss_pred ccEEEEcccccc-hhhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 197 YDRIYSIEMFEH-MKNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 197 fD~Ii~~~~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
||+|++++++++ ..+...+++.+.++|+|||.+++.++..
T Consensus 120 ~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 120 YNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp EEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred ceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 999999999887 4678899999999999999999988764
No 48
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.71 E-value=9.1e-17 Score=146.85 Aligned_cols=108 Identities=19% Similarity=0.292 Sum_probs=96.2
Q ss_pred CCCCEEEEECCcccHHHHHHHHHC-CCcEEEEEcCCHHHHHHHHHHHHHc-C-CCCeEEEEeccCCCccc-------cCc
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVL-E-LQNVEIIVADISTFEME-------ASY 197 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~~vD~s~~~l~~a~~~~~~~-~-~~~v~~~~~d~~~~~~~-------~~f 197 (357)
.++.+|||+|||+|..+..+++.+ ++.+|+|+|+|+.+++.|++++... + .++++|+++|+.+++.. ++|
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 114 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKI 114 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCe
Confidence 578899999999999999999876 7899999999999999999998876 2 34999999999987643 489
Q ss_pred cEEEEcccccchhhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 198 DRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 198 D~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
|+|+++.+++++ ++..+++++.++|+|||.+++.....
T Consensus 115 D~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~i~~~~~ 152 (299)
T 3g5t_A 115 DMITAVECAHWF-DFEKFQRSAYANLRKDGTIAIWGYAD 152 (299)
T ss_dssp EEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred eEEeHhhHHHHh-CHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 999999999999 99999999999999999999855543
No 49
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.71 E-value=5.6e-17 Score=139.51 Aligned_cols=138 Identities=17% Similarity=0.233 Sum_probs=107.2
Q ss_pred hhhcCCChHHHHHhhcCCCCccccccCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEE
Q 018346 78 EQHYELPTSFFKLVLGKYFKYSCCYFSDASKTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKIT 157 (357)
Q Consensus 78 ~~~y~~~~~~~~~~l~~~~~y~~~~f~~~~~~l~~~~~~~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~ 157 (357)
..+|+.....|.......... .... ...+..++.. .+.+|||+|||+|.++..+++. +.+|+
T Consensus 6 ~~~y~~~a~~y~~~~~~~~~~--------~~~~----~~~l~~~~~~----~~~~vLDiGcG~G~~~~~l~~~--~~~v~ 67 (203)
T 3h2b_A 6 SKAYSSPTFDAEALLGTVISA--------EDPD----RVLIEPWATG----VDGVILDVGSGTGRWTGHLASL--GHQIE 67 (203)
T ss_dssp HHHHHCTTTCHHHHTCSSCCT--------TCTT----HHHHHHHHHH----CCSCEEEETCTTCHHHHHHHHT--TCCEE
T ss_pred HHHHhhHHHHHHHHhhhhccc--------cHHH----HHHHHHHhcc----CCCeEEEecCCCCHHHHHHHhc--CCeEE
Confidence 566777777776655432111 0111 2233333332 2689999999999999999987 67999
Q ss_pred EEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc-cCccEEEEcccccchh--hHHHHHHHHHHhcccCceEEEEec
Q 018346 158 GICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEMFEHMK--NYQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 158 ~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~Ii~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
|+|+|+.+++.++++. ++++++++|+.+++.+ ++||+|+++.+++|++ +...+++++.++|||||.+++..+
T Consensus 68 gvD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 142 (203)
T 3h2b_A 68 GLEPATRLVELARQTH-----PSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFF 142 (203)
T ss_dssp EECCCHHHHHHHHHHC-----TTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEeCCHHHHHHHHHhC-----CCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 9999999999998862 3899999999987655 7899999999999995 899999999999999999999887
Q ss_pred cCCC
Q 018346 235 CHKT 238 (357)
Q Consensus 235 ~~~~ 238 (357)
....
T Consensus 143 ~~~~ 146 (203)
T 3h2b_A 143 SGPS 146 (203)
T ss_dssp CCSS
T ss_pred cCCc
Confidence 6543
No 50
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.71 E-value=1.9e-16 Score=143.68 Aligned_cols=105 Identities=22% Similarity=0.363 Sum_probs=95.2
Q ss_pred CCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccccCccEEEEcccccc
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMFEH 208 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~Ii~~~~~~~ 208 (357)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++...++ +++++.+|+.+.+..++||+|+++.+++|
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~--g~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~fD~i~~~~~~~~ 196 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLL--GYDVTSWDHNENSIAFLNETKEKENL-NISTALYDINAANIQENYDFIVSTVVFMF 196 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCGGGCCCCSCEEEEEECSSGGG
T ss_pred CCCcEEEECCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHcCC-ceEEEEeccccccccCCccEEEEccchhh
Confidence 6789999999999999999988 67999999999999999999999888 99999999998765688999999999998
Q ss_pred h--hhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 209 M--KNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 209 ~--~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
+ ++...+++++.++|+|||.+++.....
T Consensus 197 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 226 (286)
T 3m70_A 197 LNRERVPSIIKNMKEHTNVGGYNLIVAAMS 226 (286)
T ss_dssp SCGGGHHHHHHHHHHTEEEEEEEEEEEEBC
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEEEecC
Confidence 8 557799999999999999988765543
No 51
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.71 E-value=1.4e-16 Score=139.19 Aligned_cols=118 Identities=19% Similarity=0.272 Sum_probs=99.5
Q ss_pred HHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc
Q 018346 114 EKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM 193 (357)
Q Consensus 114 ~~~~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~ 193 (357)
.....+.+.+.+ .++.+|||+|||+|.++..+++..+ +|+|+|+|+.+++.|+++....+ .+++++.+|+.+.+.
T Consensus 25 ~~~~~~~l~~~~--~~~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~~ 99 (227)
T 1ve3_A 25 IETLEPLLMKYM--KKRGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSRE-SNVEFIVGDARKLSF 99 (227)
T ss_dssp HHHHHHHHHHSC--CSCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCTTSCCS
T ss_pred HHHHHHHHHHhc--CCCCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcC-CCceEEECchhcCCC
Confidence 334444444443 3578999999999999999998854 99999999999999999988776 489999999988765
Q ss_pred c-cCccEEEEccc--ccchhhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 194 E-ASYDRIYSIEM--FEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 194 ~-~~fD~Ii~~~~--~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
+ ++||+|+++.+ +++.++...+++++.++|+|||.+++..++.
T Consensus 100 ~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 145 (227)
T 1ve3_A 100 EDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTDL 145 (227)
T ss_dssp CTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred CCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecCh
Confidence 4 68999999999 6666788999999999999999999988764
No 52
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.71 E-value=2.6e-17 Score=145.67 Aligned_cols=105 Identities=19% Similarity=0.285 Sum_probs=93.1
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccccCccEEEEccccc
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMFE 207 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~Ii~~~~~~ 207 (357)
.++.+|||||||+|..+..+++. +.+|+|+|+|+.+++.|+++... +++++++|+.+...+++||+|++..+++
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~----~v~~~~~d~~~~~~~~~fD~v~~~~~l~ 114 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEH--FNDITCVEASEEAISHAQGRLKD----GITYIHSRFEDAQLPRRYDNIVLTHVLE 114 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTT--CSCEEEEESCHHHHHHHHHHSCS----CEEEEESCGGGCCCSSCEEEEEEESCGG
T ss_pred cCCCcEEEECCCCCHHHHHHHHh--CCcEEEEeCCHHHHHHHHHhhhC----CeEEEEccHHHcCcCCcccEEEEhhHHH
Confidence 36779999999999999999987 45899999999999999887543 7999999998874447899999999999
Q ss_pred chhhHHHHHHHHH-HhcccCceEEEEeccCCC
Q 018346 208 HMKNYQNLLKKIS-KWMKEDTLLFVHHFCHKT 238 (357)
Q Consensus 208 ~~~~~~~~l~~~~-~~LkpgG~l~~~~~~~~~ 238 (357)
|++++..+++++. ++|||||++++.+++...
T Consensus 115 ~~~~~~~~l~~~~~~~LkpgG~l~i~~~~~~~ 146 (250)
T 2p7i_A 115 HIDDPVALLKRINDDWLAEGGRLFLVCPNANA 146 (250)
T ss_dssp GCSSHHHHHHHHHHTTEEEEEEEEEEEECTTC
T ss_pred hhcCHHHHHHHHHHHhcCCCCEEEEEcCChHH
Confidence 9999999999999 999999999999886643
No 53
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.71 E-value=1.4e-16 Score=138.47 Aligned_cols=106 Identities=19% Similarity=0.274 Sum_probs=93.0
Q ss_pred CCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCc--cc-cCccEEEEccc
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE--ME-ASYDRIYSIEM 205 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~--~~-~~fD~Ii~~~~ 205 (357)
++.+|||||||+|.++..+++..|+.+|+|+|+|+.+++.|++++...+++++.++++|+.+++ ++ ++||+|+++.+
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~ 120 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFS 120 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESC
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECC
Confidence 5789999999999999999999998999999999999999999999988889999999998865 33 68999999987
Q ss_pred ccchh--------hHHHHHHHHHHhcccCceEEEEec
Q 018346 206 FEHMK--------NYQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 206 ~~~~~--------~~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
..+.. ....+++.+.++|+|||.+++.+.
T Consensus 121 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 121 DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred CCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 54332 236799999999999999999764
No 54
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.71 E-value=4.6e-17 Score=136.00 Aligned_cols=106 Identities=18% Similarity=0.261 Sum_probs=92.1
Q ss_pred HHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc-cCccEEE
Q 018346 123 ERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIY 201 (357)
Q Consensus 123 ~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~Ii 201 (357)
+.+...++.+|||+|||+|.++..+++.. .+|+|+|+|+.+++.++++ .+++++..+| .+.+ ++||+|+
T Consensus 11 ~~~~~~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~-----~~~v~~~~~d---~~~~~~~~D~v~ 80 (170)
T 3i9f_A 11 PNIFEGKKGVIVDYGCGNGFYCKYLLEFA--TKLYCIDINVIALKEVKEK-----FDSVITLSDP---KEIPDNSVDFIL 80 (170)
T ss_dssp HHHHSSCCEEEEEETCTTCTTHHHHHTTE--EEEEEECSCHHHHHHHHHH-----CTTSEEESSG---GGSCTTCEEEEE
T ss_pred HhcCcCCCCeEEEECCCCCHHHHHHHhhc--CeEEEEeCCHHHHHHHHHh-----CCCcEEEeCC---CCCCCCceEEEE
Confidence 33445678899999999999999999875 4999999999999999887 3489999999 3333 7899999
Q ss_pred EcccccchhhHHHHHHHHHHhcccCceEEEEeccCCC
Q 018346 202 SIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHKT 238 (357)
Q Consensus 202 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 238 (357)
++.+++++++...+++++.++|||||.+++..+....
T Consensus 81 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 117 (170)
T 3i9f_A 81 FANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRKEN 117 (170)
T ss_dssp EESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECSSC
T ss_pred EccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCccc
Confidence 9999999999999999999999999999998876654
No 55
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.70 E-value=2.6e-17 Score=146.93 Aligned_cols=110 Identities=15% Similarity=0.202 Sum_probs=91.9
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc-c
Q 018346 117 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-A 195 (357)
Q Consensus 117 ~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~ 195 (357)
+++.+.+..+ .+.+|||||||+|..+..|++. +.+|+|+|+|+.|++.|+++ ++++++++|+++++++ +
T Consensus 29 l~~~l~~~~~--~~~~vLDvGcGtG~~~~~l~~~--~~~v~gvD~s~~ml~~a~~~------~~v~~~~~~~e~~~~~~~ 98 (257)
T 4hg2_A 29 LFRWLGEVAP--ARGDALDCGCGSGQASLGLAEF--FERVHAVDPGEAQIRQALRH------PRVTYAVAPAEDTGLPPA 98 (257)
T ss_dssp HHHHHHHHSS--CSSEEEEESCTTTTTHHHHHTT--CSEEEEEESCHHHHHTCCCC------TTEEEEECCTTCCCCCSS
T ss_pred HHHHHHHhcC--CCCCEEEEcCCCCHHHHHHHHh--CCEEEEEeCcHHhhhhhhhc------CCceeehhhhhhhcccCC
Confidence 3444444443 4579999999999999999987 57999999999999877532 3899999999998776 8
Q ss_pred CccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEeccCC
Q 018346 196 SYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 196 ~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 237 (357)
+||+|++..++|++ +..++++++.++|||||++++......
T Consensus 99 sfD~v~~~~~~h~~-~~~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 99 SVDVAIAAQAMHWF-DLDRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp CEEEEEECSCCTTC-CHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred cccEEEEeeehhHh-hHHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 89999999999887 577899999999999999998776544
No 56
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.70 E-value=1.2e-16 Score=138.13 Aligned_cols=111 Identities=18% Similarity=0.128 Sum_probs=98.0
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc-c
Q 018346 117 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-A 195 (357)
Q Consensus 117 ~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~ 195 (357)
....+++.+...++.+|||+|||+|..+..+++. +.+|+++|+|+.+++.|++++...+.++++++.+|+.+.... +
T Consensus 65 ~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 142 (210)
T 3lbf_A 65 MVARMTELLELTPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARA 142 (210)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGC
T ss_pred HHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCC
Confidence 4455666777888999999999999999999988 789999999999999999999998887899999999875443 7
Q ss_pred CccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEecc
Q 018346 196 SYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFC 235 (357)
Q Consensus 196 ~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 235 (357)
+||+|+++.+++++++ .+.+.|||||++++..++
T Consensus 143 ~~D~i~~~~~~~~~~~------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 143 PFDAIIVTAAPPEIPT------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CEEEEEESSBCSSCCT------HHHHTEEEEEEEEEEECS
T ss_pred CccEEEEccchhhhhH------HHHHhcccCcEEEEEEcC
Confidence 8999999999998864 578999999999998886
No 57
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.70 E-value=5.6e-17 Score=143.35 Aligned_cols=105 Identities=19% Similarity=0.224 Sum_probs=95.7
Q ss_pred CCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccccCccEEEEcc-ccc
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIE-MFE 207 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~Ii~~~-~~~ 207 (357)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++....+. +++++++|+.+++.+++||+|+++. +++
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~fD~v~~~~~~l~ 113 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK--FKNTWAVDLSQEMLSEAENKFRSQGL-KPRLACQDISNLNINRKFDLITCCLDSTN 113 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG--SSEEEEECSCHHHHHHHHHHHHHTTC-CCEEECCCGGGCCCSCCEEEEEECTTGGG
T ss_pred CCCeEEEeCCCCCHHHHHHHHC--CCcEEEEECCHHHHHHHHHHHhhcCC-CeEEEecccccCCccCCceEEEEcCcccc
Confidence 6789999999999999999987 67999999999999999999988776 8999999998876557899999998 999
Q ss_pred ch---hhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 208 HM---KNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 208 ~~---~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
|+ ++...+++++.++|||||.+++..++.
T Consensus 114 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 145 (246)
T 1y8c_A 114 YIIDSDDLKKYFKAVSNHLKEGGVFIFDINSY 145 (246)
T ss_dssp GCCSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred ccCCHHHHHHHHHHHHHhcCCCcEEEEEecCH
Confidence 99 778999999999999999999977754
No 58
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.70 E-value=4.2e-17 Score=143.68 Aligned_cols=115 Identities=17% Similarity=0.184 Sum_probs=97.3
Q ss_pred HHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEEeccCCCccccCcc
Q 018346 120 LYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEMEASYD 198 (357)
Q Consensus 120 ~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~fD 198 (357)
.++......+ .+|||+|||+|..+..+++. +.+|+|+|+|+.+++.|+++....+. .+++++++|+.+.+..++||
T Consensus 58 ~~~~~~~~~~-~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD 134 (235)
T 3lcc_A 58 HLVDTSSLPL-GRALVPGCGGGHDVVAMASP--ERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTELFD 134 (235)
T ss_dssp HHHHTTCSCC-EEEEEETCTTCHHHHHHCBT--TEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCEE
T ss_pred HHHHhcCCCC-CCEEEeCCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCCee
Confidence 3444444444 59999999999999999764 78999999999999999998876433 37999999999876557899
Q ss_pred EEEEcccccchh--hHHHHHHHHHHhcccCceEEEEeccCC
Q 018346 199 RIYSIEMFEHMK--NYQNLLKKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 199 ~Ii~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~ 237 (357)
+|+++.++++++ +...+++++.++|||||.+++..+...
T Consensus 135 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 175 (235)
T 3lcc_A 135 LIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPIT 175 (235)
T ss_dssp EEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCS
T ss_pred EEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEeccc
Confidence 999999999997 899999999999999999999776543
No 59
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.70 E-value=1.2e-16 Score=135.32 Aligned_cols=108 Identities=14% Similarity=0.140 Sum_probs=89.4
Q ss_pred CCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCc--cccCccEEEEc
Q 018346 126 RLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE--MEASYDRIYSI 203 (357)
Q Consensus 126 ~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~--~~~~fD~Ii~~ 203 (357)
.+.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++...+++++++++.|...++ .+++||+|+++
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~ 96 (185)
T 3mti_A 19 VLDDESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFN 96 (185)
T ss_dssp TCCTTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEE
T ss_pred hCCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEe
Confidence 3567899999999999999999987 7899999999999999999999988888999998877642 13789999998
Q ss_pred ccccc---------hhhHHHHHHHHHHhcccCceEEEEecc
Q 018346 204 EMFEH---------MKNYQNLLKKISKWMKEDTLLFVHHFC 235 (357)
Q Consensus 204 ~~~~~---------~~~~~~~l~~~~~~LkpgG~l~~~~~~ 235 (357)
..+.+ ..+...+++++.++|||||.+++..+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 97 LGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp EC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred CCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 43322 245667899999999999999997654
No 60
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.70 E-value=1e-16 Score=143.24 Aligned_cols=104 Identities=13% Similarity=0.247 Sum_probs=93.7
Q ss_pred CCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc-cCccEEEEcc
Q 018346 126 RLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIE 204 (357)
Q Consensus 126 ~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~Ii~~~ 204 (357)
.+.++.+|||+|||+|..+..+++. +.+|+|+|+|+.+++.+++++ ..+.++++++.+|+.+++.+ ++||+|+++.
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 112 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIAR--GYRYIALDADAAMLEVFRQKI-AGVDRKVQVVQADARAIPLPDESVHGVIVVH 112 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTT--TCEEEEEESCHHHHHHHHHHT-TTSCTTEEEEESCTTSCCSCTTCEEEEEEES
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHh-hccCCceEEEEcccccCCCCCCCeeEEEECC
Confidence 4567889999999999999999987 689999999999999999987 33345899999999887654 7899999999
Q ss_pred cccchhhHHHHHHHHHHhcccCceEEEE
Q 018346 205 MFEHMKNYQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 205 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 232 (357)
+++++++...+++++.++|||||.+++.
T Consensus 113 ~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 113 LWHLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp CGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred chhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 9999999999999999999999999987
No 61
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.70 E-value=3.7e-16 Score=134.86 Aligned_cols=110 Identities=14% Similarity=0.133 Sum_probs=95.4
Q ss_pred HHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCcc-ccCc
Q 018346 120 LYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEM-EASY 197 (357)
Q Consensus 120 ~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~~-~~~f 197 (357)
.++..+.+.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++++..+++ +++++.+|+.+... ..+|
T Consensus 46 ~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~ 123 (204)
T 3njr_A 46 LTLAALAPRRGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLP 123 (204)
T ss_dssp HHHHHHCCCTTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCC
T ss_pred HHHHhcCCCCCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCC
Confidence 4556667788899999999999999999987 789999999999999999999999987 89999999987322 2579
Q ss_pred cEEEEcccccchhhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 198 DRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 198 D~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
|+|+++..+ +.. +++++.++|||||++++...+.
T Consensus 124 D~v~~~~~~----~~~-~l~~~~~~LkpgG~lv~~~~~~ 157 (204)
T 3njr_A 124 EAVFIGGGG----SQA-LYDRLWEWLAPGTRIVANAVTL 157 (204)
T ss_dssp SEEEECSCC----CHH-HHHHHHHHSCTTCEEEEEECSH
T ss_pred CEEEECCcc----cHH-HHHHHHHhcCCCcEEEEEecCc
Confidence 999998755 455 9999999999999999987654
No 62
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.70 E-value=3.3e-17 Score=144.94 Aligned_cols=108 Identities=12% Similarity=0.171 Sum_probs=94.3
Q ss_pred CCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc-cCccEEEEccccc
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEMFE 207 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~Ii~~~~~~ 207 (357)
++.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.|+++....+..+++++.+|+.+++.+ ++||+|+++.+++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 157 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIG 157 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhh
Confidence 57899999999999999998775 569999999999999999998766434799999999887655 5899999999999
Q ss_pred chhh--HHHHHHHHHHhcccCceEEEEeccCC
Q 018346 208 HMKN--YQNLLKKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 208 ~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~ 237 (357)
++++ ...+++++.++|||||++++.++...
T Consensus 158 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 189 (241)
T 2ex4_A 158 HLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQ 189 (241)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBS
T ss_pred hCCHHHHHHHHHHHHHhcCCCeEEEEEEccCC
Confidence 9976 55899999999999999999877543
No 63
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.70 E-value=6.7e-17 Score=147.30 Aligned_cols=106 Identities=19% Similarity=0.360 Sum_probs=90.1
Q ss_pred CCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCC------------------------------
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL------------------------------ 178 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~------------------------------ 178 (357)
++.+|||||||+|..+..+++.+++.+|+|+|+|+.+++.|++++...+.
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 57899999999999999999998889999999999999999998765431
Q ss_pred ----------------------------CCeEEEEeccCCCc------cccCccEEEEcccccchh------hHHHHHHH
Q 018346 179 ----------------------------QNVEIIVADISTFE------MEASYDRIYSIEMFEHMK------NYQNLLKK 218 (357)
Q Consensus 179 ----------------------------~~v~~~~~d~~~~~------~~~~fD~Ii~~~~~~~~~------~~~~~l~~ 218 (357)
.+|+|+++|+.... ..++||+|+|..+++|+. +..+++++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 37999999998643 237899999999997774 78899999
Q ss_pred HHHhcccCceEEEEec
Q 018346 219 ISKWMKEDTLLFVHHF 234 (357)
Q Consensus 219 ~~~~LkpgG~l~~~~~ 234 (357)
+.++|+|||+++++..
T Consensus 206 ~~~~LkpGG~lil~~~ 221 (292)
T 3g07_A 206 IYRHLRPGGILVLEPQ 221 (292)
T ss_dssp HHHHEEEEEEEEEECC
T ss_pred HHHHhCCCcEEEEecC
Confidence 9999999999999643
No 64
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.69 E-value=6.8e-17 Score=144.79 Aligned_cols=113 Identities=16% Similarity=0.254 Sum_probs=98.1
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc-c
Q 018346 117 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-A 195 (357)
Q Consensus 117 ~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~ 195 (357)
..+.+++.+...++.+|||+|||+|..+..+++ |+.+|+|+|+|+.+++.++++. +++|+.+|+.+++.+ +
T Consensus 22 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~d~~~~~~~~~ 93 (261)
T 3ege_A 22 IVNAIINLLNLPKGSVIADIGAGTGGYSVALAN--QGLFVYAVEPSIVMRQQAVVHP------QVEWFTGYAENLALPDK 93 (261)
T ss_dssp HHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHT--TTCEEEEECSCHHHHHSSCCCT------TEEEECCCTTSCCSCTT
T ss_pred HHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHh--CCCEEEEEeCCHHHHHHHHhcc------CCEEEECchhhCCCCCC
Confidence 445566666777889999999999999999997 4889999999999988776543 899999999987765 7
Q ss_pred CccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEeccCCC
Q 018346 196 SYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHKT 238 (357)
Q Consensus 196 ~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 238 (357)
+||+|+++.+++|+++...+++++.++|| ||++++.++....
T Consensus 94 ~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~ 135 (261)
T 3ege_A 94 SVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFDIRL 135 (261)
T ss_dssp CBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEECGGG
T ss_pred CEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEcCCch
Confidence 89999999999999999999999999999 9999888876543
No 65
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.69 E-value=1.2e-16 Score=142.20 Aligned_cols=121 Identities=15% Similarity=0.174 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCC
Q 018346 112 DAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF 191 (357)
Q Consensus 112 ~~~~~~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~ 191 (357)
.........+++.+...++.+|||+|||+|.++..+++.. ..+|+++|+|+.+++.|+++.... ++++++++|+.++
T Consensus 76 ~~~~~~~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~ 152 (254)
T 1xtp_A 76 DVDIEGSRNFIASLPGHGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGM--PVGKFILASMETA 152 (254)
T ss_dssp HHHHHHHHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTS--SEEEEEESCGGGC
T ss_pred HHHHHHHHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccC--CceEEEEccHHHC
Confidence 3334455666777766778999999999999999999875 568999999999999999887654 4799999999887
Q ss_pred ccc-cCccEEEEcccccch--hhHHHHHHHHHHhcccCceEEEEecc
Q 018346 192 EME-ASYDRIYSIEMFEHM--KNYQNLLKKISKWMKEDTLLFVHHFC 235 (357)
Q Consensus 192 ~~~-~~fD~Ii~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~ 235 (357)
+.+ ++||+|++..+++|+ ++...+++++.++|||||.+++.++.
T Consensus 153 ~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 199 (254)
T 1xtp_A 153 TLPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENC 199 (254)
T ss_dssp CCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred CCCCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecC
Confidence 654 789999999999999 56889999999999999999998763
No 66
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.69 E-value=4.2e-16 Score=144.61 Aligned_cols=119 Identities=19% Similarity=0.296 Sum_probs=103.5
Q ss_pred HHHHHHHcCC--CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCccc
Q 018346 118 LELYCERSRL--EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEME 194 (357)
Q Consensus 118 l~~l~~~~~~--~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~~~ 194 (357)
...+++.++. .++.+|||+|||+|..+..+++.+|+.+++++|+| .+++.|+++....++. +++++.+|+.+.+.+
T Consensus 152 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 230 (335)
T 2r3s_A 152 AQLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYG 230 (335)
T ss_dssp HHHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCC
T ss_pred HHHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCC
Confidence 3455666666 67889999999999999999999999999999999 9999999999888774 799999999876555
Q ss_pred cCccEEEEcccccch--hhHHHHHHHHHHhcccCceEEEEeccCC
Q 018346 195 ASYDRIYSIEMFEHM--KNYQNLLKKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 195 ~~fD~Ii~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 237 (357)
+.||+|++..+++++ ++...+++++.++|+|||++++..+..+
T Consensus 231 ~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 275 (335)
T 2r3s_A 231 NDYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPN 275 (335)
T ss_dssp SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCC
T ss_pred CCCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCC
Confidence 569999999999999 5568999999999999999999877654
No 67
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.69 E-value=3.9e-17 Score=149.74 Aligned_cols=112 Identities=17% Similarity=0.201 Sum_probs=98.8
Q ss_pred CCCCCEEEEECCcccHHHHHHH-HHCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCccccCccEEEEcc
Q 018346 127 LEDGHTVLDVGCGWGSLSLYIA-QKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEMEASYDRIYSIE 204 (357)
Q Consensus 127 ~~~~~~vLDiGcG~G~~~~~la-~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~fD~Ii~~~ 204 (357)
+.++.+|||||||+|..+..++ ...|+.+|+|+|+|+.+++.|++++...++. +++++++|+.+++++++||+|+++.
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~ 195 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYDLLTSNG 195 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSCEEEEECCS
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCCeEEEEECC
Confidence 4678999999999999999986 4567899999999999999999999888774 5999999999877668899999999
Q ss_pred cccchhhHHH---HHHHHHHhcccCceEEEEeccCCC
Q 018346 205 MFEHMKNYQN---LLKKISKWMKEDTLLFVHHFCHKT 238 (357)
Q Consensus 205 ~~~~~~~~~~---~l~~~~~~LkpgG~l~~~~~~~~~ 238 (357)
+++|+++... +++++.++|||||++++..+....
T Consensus 196 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 232 (305)
T 3ocj_A 196 LNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPP 232 (305)
T ss_dssp SGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCT
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCC
Confidence 9999966654 799999999999999998876543
No 68
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.69 E-value=2.7e-16 Score=135.59 Aligned_cols=102 Identities=17% Similarity=0.266 Sum_probs=91.1
Q ss_pred CCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccccCccEEEEcccccc
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMFEH 208 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~Ii~~~~~~~ 208 (357)
++.+|||+|||+|..+..++..+|+.+|+++|+|+.+++.+++++...++++++++.+|+.+.+..++||+|+++..
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~~--- 141 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRAF--- 141 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCCCSCEEEEECSCS---
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCccCCcCEEEEecc---
Confidence 46899999999999999999988889999999999999999999999888779999999988764478999998653
Q ss_pred hhhHHHHHHHHHHhcccCceEEEEec
Q 018346 209 MKNYQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 209 ~~~~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
.++..+++.+.++|+|||.+++...
T Consensus 142 -~~~~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 142 -ASLNDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp -SSHHHHHHHHTTSEEEEEEEEEEES
T ss_pred -CCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 4678999999999999999999743
No 69
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.69 E-value=1.9e-16 Score=139.89 Aligned_cols=106 Identities=23% Similarity=0.328 Sum_probs=94.7
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc-cCccEEEEcccc
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEMF 206 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~Ii~~~~~ 206 (357)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++. ...+++++.+|+.+++.+ ++||+|++..++
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 126 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRT--GYKAVGVDISEVMIQKGKERG---EGPDLSFIKGDLSSLPFENEQFEAIMAINSL 126 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHTTT---CBTTEEEEECBTTBCSSCTTCEEEEEEESCT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhc---ccCCceEEEcchhcCCCCCCCccEEEEcChH
Confidence 36789999999999999999987 779999999999999998764 224899999999987754 789999999999
Q ss_pred cchhhHHHHHHHHHHhcccCceEEEEeccCCC
Q 018346 207 EHMKNYQNLLKKISKWMKEDTLLFVHHFCHKT 238 (357)
Q Consensus 207 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 238 (357)
+|+++...+++++.++|+|||.+++.+++...
T Consensus 127 ~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 158 (242)
T 3l8d_A 127 EWTEEPLRALNEIKRVLKSDGYACIAILGPTA 158 (242)
T ss_dssp TSSSCHHHHHHHHHHHEEEEEEEEEEEECTTC
T ss_pred hhccCHHHHHHHHHHHhCCCeEEEEEEcCCcc
Confidence 99999999999999999999999999876544
No 70
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.69 E-value=1.7e-16 Score=137.90 Aligned_cols=106 Identities=22% Similarity=0.228 Sum_probs=91.4
Q ss_pred CCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCc--c-ccCccEEEEccc
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE--M-EASYDRIYSIEM 205 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~--~-~~~fD~Ii~~~~ 205 (357)
++.+|||||||+|.++..+++.+|+.+|+|+|+|+.+++.|++++...+++++.++++|+.+++ + .++||.|+++.+
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECC
Confidence 5679999999999999999999999999999999999999999999988889999999998753 2 368999998765
Q ss_pred ccchhh--------HHHHHHHHHHhcccCceEEEEec
Q 018346 206 FEHMKN--------YQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 206 ~~~~~~--------~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
..+... ...+++.+.++|||||.+++.+.
T Consensus 118 ~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td 154 (213)
T 2fca_A 118 DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTD 154 (213)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEES
T ss_pred CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeC
Confidence 433211 36789999999999999999764
No 71
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.69 E-value=1.6e-16 Score=137.10 Aligned_cols=110 Identities=25% Similarity=0.272 Sum_probs=95.1
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc-cCccEEEEcccc
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEMF 206 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~Ii~~~~~ 206 (357)
.++.+|||+|||+|..+..++.. ++.+|+|+|+|+.+++.+++++...+. +++++++|+.+++.+ ++||+|++..++
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~fD~v~~~~~l 99 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVE-DGYKTYGIEISDLQLKKAENFSRENNF-KLNISKGDIRKLPFKDESMSFVYSYGTI 99 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHH-TTCEEEEEECCHHHHHHHHHHHHHHTC-CCCEEECCTTSCCSCTTCEEEEEECSCG
T ss_pred CCCCEEEEECCCCCHHHHHHHHh-CCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEECchhhCCCCCCceeEEEEcChH
Confidence 46789999999999985544444 378999999999999999999887764 799999999987654 789999999999
Q ss_pred cch--hhHHHHHHHHHHhcccCceEEEEeccCCCC
Q 018346 207 EHM--KNYQNLLKKISKWMKEDTLLFVHHFCHKTF 239 (357)
Q Consensus 207 ~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 239 (357)
+|+ ++...+++++.++|||||.+++..++....
T Consensus 100 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 134 (209)
T 2p8j_A 100 FHMRKNDVKEAIDEIKRVLKPGGLACINFLTTKDE 134 (209)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTST
T ss_pred HhCCHHHHHHHHHHHHHHcCCCcEEEEEEecccch
Confidence 999 788999999999999999999998876543
No 72
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.68 E-value=1.9e-16 Score=141.80 Aligned_cols=139 Identities=15% Similarity=0.250 Sum_probs=105.4
Q ss_pred hhhcC-CChHHHHHhhcCCCCccccccCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEE
Q 018346 78 EQHYE-LPTSFFKLVLGKYFKYSCCYFSDASKTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKI 156 (357)
Q Consensus 78 ~~~y~-~~~~~~~~~l~~~~~y~~~~f~~~~~~l~~~~~~~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v 156 (357)
..+|+ ...++|+.+.... ..........+.+.+.... .++.+|||+|||+|.++..+++. +.+|
T Consensus 11 ~~~y~~~~a~~yd~~~~~~-----------~~~~~~~~~~~~~~l~~~~--~~~~~vLDiGcG~G~~~~~l~~~--~~~v 75 (263)
T 3pfg_A 11 QADYSGEIAELYDLVHQGK-----------GKDYHREAADLAALVRRHS--PKAASLLDVACGTGMHLRHLADS--FGTV 75 (263)
T ss_dssp BCSCCHHHHHHHHHHHHHT-----------TCCHHHHHHHHHHHHHHHC--TTCCEEEEETCTTSHHHHHHTTT--SSEE
T ss_pred ccccchhHHHHHHHHhhcC-----------CCCHHHHHHHHHHHHHhhC--CCCCcEEEeCCcCCHHHHHHHHc--CCeE
Confidence 34566 4556666665421 1122222233344343333 35689999999999999999987 5699
Q ss_pred EEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccccCccEEEEcc-cccchh---hHHHHHHHHHHhcccCceEEEE
Q 018346 157 TGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIE-MFEHMK---NYQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 157 ~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~Ii~~~-~~~~~~---~~~~~l~~~~~~LkpgG~l~~~ 232 (357)
+|+|+|+.+++.|+++.. +++++++|+.+++.+++||+|+++. +++|++ +...+++++.++|||||.+++.
T Consensus 76 ~gvD~s~~~~~~a~~~~~-----~~~~~~~d~~~~~~~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 76 EGLELSADMLAIARRRNP-----DAVLHHGDMRDFSLGRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp EEEESCHHHHHHHHHHCT-----TSEEEECCTTTCCCSCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred EEEECCHHHHHHHHhhCC-----CCEEEECChHHCCccCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 999999999999988743 7899999999877668899999998 999994 6778899999999999999997
Q ss_pred eccC
Q 018346 233 HFCH 236 (357)
Q Consensus 233 ~~~~ 236 (357)
....
T Consensus 151 ~~~~ 154 (263)
T 3pfg_A 151 PWWF 154 (263)
T ss_dssp CCCC
T ss_pred eccC
Confidence 5543
No 73
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.68 E-value=2.4e-16 Score=136.36 Aligned_cols=106 Identities=14% Similarity=0.157 Sum_probs=91.9
Q ss_pred HHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCc-EEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc-cCcc
Q 018346 121 YCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYD 198 (357)
Q Consensus 121 l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD 198 (357)
++..... ++.+|||+|||+|..+..+ +. +|+|+|+|+.+++.++++. +++.++.+|+.+++.+ ++||
T Consensus 29 ~l~~~~~-~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~~~~~fD 97 (211)
T 2gs9_A 29 ALKGLLP-PGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRA-----PEATWVRAWGEALPFPGESFD 97 (211)
T ss_dssp HHHTTCC-CCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHC-----TTSEEECCCTTSCCSCSSCEE
T ss_pred HHHHhcC-CCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcccccCCCCCCcEE
Confidence 4443332 7789999999999998877 45 9999999999999998876 3789999999887655 6899
Q ss_pred EEEEcccccchhhHHHHHHHHHHhcccCceEEEEeccCC
Q 018346 199 RIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 199 ~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 237 (357)
+|+++.+++|++++..+++++.++|||||.+++.+++..
T Consensus 98 ~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 136 (211)
T 2gs9_A 98 VVLLFTTLEFVEDVERVLLEARRVLRPGGALVVGVLEAL 136 (211)
T ss_dssp EEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred EEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEecCCc
Confidence 999999999999999999999999999999999988654
No 74
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.68 E-value=4.9e-17 Score=135.99 Aligned_cols=112 Identities=13% Similarity=0.250 Sum_probs=94.2
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCccc
Q 018346 116 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEME 194 (357)
Q Consensus 116 ~~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~~~ 194 (357)
..+..+...+ .++.+|||+|||+|.++..++...|+++|+++|+|+.+++.+++++...|.. ++++ .|.....++
T Consensus 38 ~fY~~~~~~l--~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~~ 113 (200)
T 3fzg_A 38 DFYTYVFGNI--KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVYK 113 (200)
T ss_dssp HHHHHHHHHS--CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHTT
T ss_pred HHHHHHHhhc--CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCCC
Confidence 3455555555 3578999999999999999998889999999999999999999999999885 5666 666554444
Q ss_pred cCccEEEEcccccchhhHHHHHHHHHHhcccCceEEE
Q 018346 195 ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFV 231 (357)
Q Consensus 195 ~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 231 (357)
++||+|++..++|++++.+..+.++.+.|+|||+++-
T Consensus 114 ~~~DvVLa~k~LHlL~~~~~al~~v~~~L~pggvfIS 150 (200)
T 3fzg_A 114 GTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNFVIS 150 (200)
T ss_dssp SEEEEEEEETCHHHHHHTTCCHHHHHHTCEEEEEEEE
T ss_pred CCcChhhHhhHHHhhhhhHHHHHHHHHHhCCCCEEEE
Confidence 7899999999999997777788899999999998654
No 75
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.68 E-value=7.7e-16 Score=135.02 Aligned_cols=109 Identities=17% Similarity=0.245 Sum_probs=91.8
Q ss_pred CCCCCCEEEEECCc-ccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCC-cc-ccCccEEEE
Q 018346 126 RLEDGHTVLDVGCG-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF-EM-EASYDRIYS 202 (357)
Q Consensus 126 ~~~~~~~vLDiGcG-~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~-~~-~~~fD~Ii~ 202 (357)
.+.++.+|||+||| +|.++..+++.. +.+|+|+|+|+.+++.|++++...++ +++++++|+... +. .++||+|++
T Consensus 52 ~~~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~~~~~fD~I~~ 129 (230)
T 3evz_A 52 FLRGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNNS-NVRLVKSNGGIIKGVVEGTFDVIFS 129 (230)
T ss_dssp TCCSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTTC-CCEEEECSSCSSTTTCCSCEEEEEE
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhCC-CcEEEeCCchhhhhcccCceeEEEE
Confidence 35678999999999 999999999886 68999999999999999999999988 899999996543 22 278999999
Q ss_pred cccccchhh-------------------HHHHHHHHHHhcccCceEEEEeccC
Q 018346 203 IEMFEHMKN-------------------YQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 203 ~~~~~~~~~-------------------~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
++++.+..+ +..+++.+.++|||||++++..+..
T Consensus 130 npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 182 (230)
T 3evz_A 130 APPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDK 182 (230)
T ss_dssp CCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESC
T ss_pred CCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEeccc
Confidence 998865432 5789999999999999999976643
No 76
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.68 E-value=1.9e-16 Score=139.90 Aligned_cols=111 Identities=14% Similarity=0.214 Sum_probs=96.2
Q ss_pred HHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCc-EEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc-cCcc
Q 018346 121 YCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYD 198 (357)
Q Consensus 121 l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD 198 (357)
+...+...++.+|||+|||+|..+..+++. +. +|+|+|+|+.+++.++++... .+++++.+|+.+.+.+ ++||
T Consensus 35 l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~---~~~~~~~~d~~~~~~~~~~fD 109 (243)
T 3bkw_A 35 LRAMLPEVGGLRIVDLGCGFGWFCRWAHEH--GASYVLGLDLSEKMLARARAAGPD---TGITYERADLDKLHLPQDSFD 109 (243)
T ss_dssp HHHHSCCCTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTSCS---SSEEEEECCGGGCCCCTTCEE
T ss_pred HHHhccccCCCEEEEEcCcCCHHHHHHHHC--CCCeEEEEcCCHHHHHHHHHhccc---CCceEEEcChhhccCCCCCce
Confidence 444455567889999999999999999987 45 999999999999999887543 2799999999887654 7899
Q ss_pred EEEEcccccchhhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 199 RIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 199 ~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
+|++..+++++++...+++++.++|+|||.+++.+++.
T Consensus 110 ~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 147 (243)
T 3bkw_A 110 LAYSSLALHYVEDVARLFRTVHQALSPGGHFVFSTEHP 147 (243)
T ss_dssp EEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred EEEEeccccccchHHHHHHHHHHhcCcCcEEEEEeCCc
Confidence 99999999999999999999999999999999988654
No 77
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.68 E-value=1.3e-16 Score=145.20 Aligned_cols=107 Identities=21% Similarity=0.319 Sum_probs=93.5
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCC----CCeEEEEeccCCCc---cc-cCccE
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL----QNVEIIVADISTFE---ME-ASYDR 199 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~----~~v~~~~~d~~~~~---~~-~~fD~ 199 (357)
.++.+|||||||+|..+..+++. +.+|+|+|+|+.+++.|+++....+. .++.+..+|+.+++ +. ++||+
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~ 133 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEE--GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDA 133 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEE
Confidence 46789999999999999999988 67999999999999999988754332 37889999988765 33 78999
Q ss_pred EEEc-ccccchhh-------HHHHHHHHHHhcccCceEEEEeccC
Q 018346 200 IYSI-EMFEHMKN-------YQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 200 Ii~~-~~~~~~~~-------~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
|++. .+++|+++ ...+++++.++|||||++++..++.
T Consensus 134 V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 178 (293)
T 3thr_A 134 VICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNY 178 (293)
T ss_dssp EEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred EEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCCH
Confidence 9998 89999988 9999999999999999999988764
No 78
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.68 E-value=2.4e-16 Score=136.41 Aligned_cols=102 Identities=15% Similarity=0.240 Sum_probs=91.0
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccccCccEEEEccccc
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMFE 207 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~Ii~~~~~~ 207 (357)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++. ++.+..+|+..++..++||+|+++.+++
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~------~~~~~~~d~~~~~~~~~fD~v~~~~~l~ 113 (211)
T 3e23_A 42 PAGAKILELGCGAGYQAEAMLAA--GFDVDATDGSPELAAEASRRL------GRPVRTMLFHQLDAIDAYDAVWAHACLL 113 (211)
T ss_dssp CTTCEEEESSCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH------TSCCEECCGGGCCCCSCEEEEEECSCGG
T ss_pred CCCCcEEEECCCCCHHHHHHHHc--CCeEEEECCCHHHHHHHHHhc------CCceEEeeeccCCCCCcEEEEEecCchh
Confidence 46789999999999999999987 679999999999999999876 5677889998877558899999999999
Q ss_pred chh--hHHHHHHHHHHhcccCceEEEEeccCC
Q 018346 208 HMK--NYQNLLKKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 208 ~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~ 237 (357)
+++ +...+++++.++|||||++++..+...
T Consensus 114 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 145 (211)
T 3e23_A 114 HVPRDELADVLKLIWRALKPGGLFYASYKSGE 145 (211)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEECCS
T ss_pred hcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCC
Confidence 996 888999999999999999999876543
No 79
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.67 E-value=2.5e-16 Score=138.15 Aligned_cols=108 Identities=23% Similarity=0.431 Sum_probs=96.3
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCC-----CCeEEEEeccCCCccc-cCccEEE
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-----QNVEIIVADISTFEME-ASYDRIY 201 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~-----~~v~~~~~d~~~~~~~-~~fD~Ii 201 (357)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++....++ +++.++.+|+..++.+ ++||+|+
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 106 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK--GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAV 106 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEE
Confidence 47789999999999999999987 78999999999999999999877665 2589999999987654 7899999
Q ss_pred EcccccchhhHH---HHHHHHHHhcccCceEEEEeccCC
Q 018346 202 SIEMFEHMKNYQ---NLLKKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 202 ~~~~~~~~~~~~---~~l~~~~~~LkpgG~l~~~~~~~~ 237 (357)
++.+++++++.. .+++++.++|+|||.+++.++...
T Consensus 107 ~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 145 (235)
T 3sm3_A 107 MQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQN 145 (235)
T ss_dssp EESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCC
T ss_pred EcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcc
Confidence 999999997766 899999999999999999887653
No 80
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.67 E-value=3.6e-16 Score=145.87 Aligned_cols=122 Identities=15% Similarity=0.143 Sum_probs=101.3
Q ss_pred HHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHH-------HHcCC--CCeEEE
Q 018346 114 EKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQC-------RVLEL--QNVEII 184 (357)
Q Consensus 114 ~~~~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~-------~~~~~--~~v~~~ 184 (357)
....+..+++.+.+.++.+|||||||+|.+++.++...+..+|+|||+|+.+++.|+++. ...|+ ++|+|+
T Consensus 158 ~~~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi 237 (438)
T 3uwp_A 158 SFDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLE 237 (438)
T ss_dssp HHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEE
T ss_pred CHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEE
Confidence 344667788888889999999999999999999998875557999999999999998764 33454 489999
Q ss_pred EeccCCCccc---cCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 185 VADISTFEME---ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 185 ~~d~~~~~~~---~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
++|+.+.++. ..||+|+++.++ +.++....+.++.+.|||||++++.....
T Consensus 238 ~GD~~~lp~~d~~~~aDVVf~Nn~~-F~pdl~~aL~Ei~RvLKPGGrIVssE~f~ 291 (438)
T 3uwp_A 238 RGDFLSEEWRERIANTSVIFVNNFA-FGPEVDHQLKERFANMKEGGRIVSSKPFA 291 (438)
T ss_dssp ECCTTSHHHHHHHHTCSEEEECCTT-CCHHHHHHHHHHHTTSCTTCEEEESSCSS
T ss_pred ECcccCCccccccCCccEEEEcccc-cCchHHHHHHHHHHcCCCCcEEEEeeccc
Confidence 9999987653 479999999876 35788888999999999999999865544
No 81
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.67 E-value=1.2e-16 Score=154.96 Aligned_cols=198 Identities=16% Similarity=0.142 Sum_probs=113.8
Q ss_pred HHHHHHHHHHHHHh-ccCCccccchhhh--------hhhcCCChHHHHHhhcCCCCccccccCCCCCCHHHHHHHHHHHH
Q 018346 51 ELQLSDLLQFAHSL-REMPIAIQTDKAK--------EQHYELPTSFFKLVLGKYFKYSCCYFSDASKTLEDAEKAMLELY 121 (357)
Q Consensus 51 ~~~~~~~~~~~~~~-~~~p~~~~~~~~~--------~~~y~~~~~~~~~~l~~~~~y~~~~f~~~~~~l~~~~~~~l~~l 121 (357)
++....+..+++++ ++.|.+++.++.. ..+|+.... ...++.++ .......+.+
T Consensus 88 ~~~~~~~~~ll~~~~~~~pl~~i~~~r~~~~~~~~~~~~y~~~~~-~~~~L~d~----------------~~t~~~~~~i 150 (480)
T 3b3j_A 88 PHDFCSFYNILKTCRGHTLERSVFSERTEESSAVQYFQFYGYLSQ-QQNMMQDY----------------VRTGTYQRAI 150 (480)
T ss_dssp --------------------------------CCEEEEGGGCSCH-HHHHHHHH----------------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHhhhhhhhchhhHHHHHhhhcc-chhhhcCh----------------HhHHHHHHHH
Confidence 44556677777777 7778888874311 233333222 22222221 0112233445
Q ss_pred HHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEEeccCCCccccCccEE
Q 018346 122 CERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEMEASYDRI 200 (357)
Q Consensus 122 ~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~fD~I 200 (357)
++.+...++.+|||||||+|.+++.+++. +..+|+|+|+|+ +++.|++++..+++ ++|+++.+|+.+++.+++||+|
T Consensus 151 l~~l~~~~~~~VLDiGcGtG~la~~la~~-~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~~~fD~I 228 (480)
T 3b3j_A 151 LQNHTDFKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDII 228 (480)
T ss_dssp HHTGGGTTTCEEEEESCSTTHHHHHHHHT-TCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEE
T ss_pred HHhhhhcCCCEEEEecCcccHHHHHHHHc-CCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccCCCeEEE
Confidence 55555557889999999999999999874 567999999998 99999999999988 5899999999987655789999
Q ss_pred EEcccccch--hhHHHHHHHHHHhcccCceEEEEeccCCCCCccccc-----CCccchhhhcccCCCCCCCHHH
Q 018346 201 YSIEMFEHM--KNYQNLLKKISKWMKEDTLLFVHHFCHKTFAYHFED-----TNDDDWITKYFFTGGTMPSANL 267 (357)
Q Consensus 201 i~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~p~~~~ 267 (357)
+++.+++++ ++....+..+.++|||||.+++...+....+..... ....+++....+++..++....
T Consensus 229 vs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~~~~~~~~pi~~~~l~~e~~~~~~~w~~~~~~g~dl~~l~~ 302 (480)
T 3b3j_A 229 ISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTIGDVHLAPFTDEQLYMEQFTKANFWYQPSFHGVDLSALRG 302 (480)
T ss_dssp ECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESCEEEEEEEEECCHHHHHHHHHHHHHHHSSCBTTBCCGGGHH
T ss_pred EEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEEeceeeeeccCchHHHHHHhhccCccccccCCCcChhhhhh
Confidence 999887766 445667788899999999998654332111110000 0012233344678887776543
No 82
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.67 E-value=2.5e-17 Score=145.41 Aligned_cols=154 Identities=10% Similarity=0.021 Sum_probs=105.8
Q ss_pred hhhcCCChHHHHHhhcCCCCccc--c-ccCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCc
Q 018346 78 EQHYELPTSFFKLVLGKYFKYSC--C-YFSDASKTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNC 154 (357)
Q Consensus 78 ~~~y~~~~~~~~~~l~~~~~y~~--~-~f~~~~~~l~~~~~~~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~ 154 (357)
+.+|+.+.++...|......|.. . ........+.......+..+.... ..++.+|||||||+|.++..+++.. ..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~Yd~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~vLDiGcGtG~~~~~l~~~~-~~ 84 (236)
T 1zx0_A 7 TPIFAPGENCSPAWGAAPAAYDAADTHLRILGKPVMERWETPYMHALAAAA-SSKGGRVLEVGFGMAIAASKVQEAP-ID 84 (236)
T ss_dssp -CCSCTTCBCHHHHTTSCEEECTTSCEEEETTEEEEEGGGHHHHHHHHHHH-TTTCEEEEEECCTTSHHHHHHHTSC-EE
T ss_pred CCccCCcCCCchhhhcchhhcCCccchhhccchHHHHHHHHHHHHHHHhhc-CCCCCeEEEEeccCCHHHHHHHhcC-CC
Confidence 34567777777777766555531 0 000000111112222333333333 3567899999999999999997643 35
Q ss_pred EEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCC--ccc-cCccEEEE-cccc----cchhhHHHHHHHHHHhcccC
Q 018346 155 KITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF--EME-ASYDRIYS-IEMF----EHMKNYQNLLKKISKWMKED 226 (357)
Q Consensus 155 ~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~--~~~-~~fD~Ii~-~~~~----~~~~~~~~~l~~~~~~Lkpg 226 (357)
+|+|+|+|+.+++.|+++....+. +++++++|+.++ +++ ++||+|++ ..++ .+..+...+++++.++||||
T Consensus 85 ~v~gvD~s~~~l~~a~~~~~~~~~-~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~Lkpg 163 (236)
T 1zx0_A 85 EHWIIECNDGVFQRLRDWAPRQTH-KVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPG 163 (236)
T ss_dssp EEEEEECCHHHHHHHHHHGGGCSS-EEEEEESCHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEE
T ss_pred eEEEEcCCHHHHHHHHHHHHhcCC-CeEEEecCHHHhhcccCCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCC
Confidence 999999999999999998877664 899999999876 444 78999999 4432 12345567899999999999
Q ss_pred ceEEEEec
Q 018346 227 TLLFVHHF 234 (357)
Q Consensus 227 G~l~~~~~ 234 (357)
|++++...
T Consensus 164 G~l~~~~~ 171 (236)
T 1zx0_A 164 GVLTYCNL 171 (236)
T ss_dssp EEEEECCH
T ss_pred eEEEEEec
Confidence 99988554
No 83
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.67 E-value=3.2e-16 Score=134.17 Aligned_cols=111 Identities=15% Similarity=0.220 Sum_probs=94.1
Q ss_pred CCCCCCEEEEECCcccHHHHHHHHHC-CCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEEeccCCCc--cccCccEEE
Q 018346 126 RLEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFE--MEASYDRIY 201 (357)
Q Consensus 126 ~~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~--~~~~fD~Ii 201 (357)
.+.++.+|||+|||+|.++..+++.. |..+|+|+|+|+.+++.|++++...++ ++++++++|+.+++ .+++||+|+
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~ 98 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVM 98 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEE
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEE
Confidence 35678899999999999999999885 567999999999999999999999887 58999999988764 237899999
Q ss_pred Eccccc---------chhhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 202 SIEMFE---------HMKNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 202 ~~~~~~---------~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
++.++. ...+...+++++.++|||||++++..+..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 142 (197)
T 3eey_A 99 FNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYG 142 (197)
T ss_dssp EEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCB
T ss_pred EcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccC
Confidence 998661 12356679999999999999999987543
No 84
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.67 E-value=6.5e-17 Score=140.80 Aligned_cols=108 Identities=16% Similarity=0.167 Sum_probs=86.5
Q ss_pred CCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHH----HHcCCCCeEEEEeccCCCccc-cCccEE
Q 018346 126 RLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQC----RVLELQNVEIIVADISTFEME-ASYDRI 200 (357)
Q Consensus 126 ~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~----~~~~~~~v~~~~~d~~~~~~~-~~fD~I 200 (357)
...++.+|||+|||+|.++..+++.+|+.+|+|+|+|+.+++.+.+++ ...+.++++++++|+.++++. ++ |.|
T Consensus 24 ~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v 102 (218)
T 3mq2_A 24 RSQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GEL 102 (218)
T ss_dssp HTTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEE
T ss_pred hccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEE
Confidence 356788999999999999999999999999999999999888644333 345666899999999987765 44 666
Q ss_pred EEcc---cc--cchhhHHHHHHHHHHhcccCceEEEEec
Q 018346 201 YSIE---MF--EHMKNYQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 201 i~~~---~~--~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
++.. .. +++++...+++++.++|||||.+++...
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 141 (218)
T 3mq2_A 103 HVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALN 141 (218)
T ss_dssp EEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEec
Confidence 6433 22 2556668999999999999999999554
No 85
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.67 E-value=3.3e-16 Score=140.17 Aligned_cols=113 Identities=15% Similarity=0.191 Sum_probs=94.5
Q ss_pred HHHcCCC-CCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCcc---ccC
Q 018346 122 CERSRLE-DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEM---EAS 196 (357)
Q Consensus 122 ~~~~~~~-~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~~---~~~ 196 (357)
....... ++.+|||+|||+|.++..+++..+ .+|+|+|+|+.+++.|++++..+++. +++++++|+.+... .++
T Consensus 41 ~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~-~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~ 119 (259)
T 3lpm_A 41 AKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTK-AKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKER 119 (259)
T ss_dssp HHHCCCCSSCCEEEETTCTTTHHHHHHHTTCC-CEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTC
T ss_pred HHHhcCCCCCCEEEEcCCchhHHHHHHHHhcC-CcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCC
Confidence 3345666 789999999999999999998864 49999999999999999999999885 79999999988653 378
Q ss_pred ccEEEEcccccch--------------------hhHHHHHHHHHHhcccCceEEEEecc
Q 018346 197 YDRIYSIEMFEHM--------------------KNYQNLLKKISKWMKEDTLLFVHHFC 235 (357)
Q Consensus 197 fD~Ii~~~~~~~~--------------------~~~~~~l~~~~~~LkpgG~l~~~~~~ 235 (357)
||+|++|+++... .+...+++.+.++|||||++++..+.
T Consensus 120 fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 178 (259)
T 3lpm_A 120 ADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRP 178 (259)
T ss_dssp EEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred ccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcH
Confidence 9999999987544 34567999999999999999996543
No 86
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.67 E-value=4.8e-16 Score=146.40 Aligned_cols=119 Identities=20% Similarity=0.296 Sum_probs=101.2
Q ss_pred HHHHHHHHHHcC--CCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCc
Q 018346 115 KAMLELYCERSR--LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE 192 (357)
Q Consensus 115 ~~~l~~l~~~~~--~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~ 192 (357)
..+++.+.+... ..++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.|++++..+++ +++++.+|+.+..
T Consensus 217 ~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~--g~~V~gvDis~~al~~A~~n~~~~~~-~v~~~~~D~~~~~ 293 (381)
T 3dmg_A 217 LLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARM--GAEVVGVEDDLASVLSLQKGLEANAL-KAQALHSDVDEAL 293 (381)
T ss_dssp HHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHT--TCEEEEEESBHHHHHHHHHHHHHTTC-CCEEEECSTTTTS
T ss_pred HHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCC-CeEEEEcchhhcc
Confidence 445555554442 336789999999999999999987 67999999999999999999999887 6999999999876
Q ss_pred cc-cCccEEEEcccccc-----hhhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 193 ME-ASYDRIYSIEMFEH-----MKNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 193 ~~-~~fD~Ii~~~~~~~-----~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
.+ ++||+|++++++++ ..+...+++++.++|||||.+++.....
T Consensus 294 ~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~ 343 (381)
T 3dmg_A 294 TEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPF 343 (381)
T ss_dssp CTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTT
T ss_pred ccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCC
Confidence 55 78999999999988 4678899999999999999999976543
No 87
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.67 E-value=4.8e-16 Score=146.21 Aligned_cols=115 Identities=11% Similarity=0.152 Sum_probs=96.4
Q ss_pred HHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCC---CeEEEEeccCCCccccCc
Q 018346 121 YCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ---NVEIIVADISTFEMEASY 197 (357)
Q Consensus 121 l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~---~v~~~~~d~~~~~~~~~f 197 (357)
+++.+...++.+|||+|||+|.++..+++.+|+.+|+|+|+|+.+++.|++++..+++. +++|+.+|+.+....++|
T Consensus 214 ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~~~~f 293 (375)
T 4dcm_A 214 FMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRF 293 (375)
T ss_dssp HHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCCTTCE
T ss_pred HHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCCCCCe
Confidence 45556666678999999999999999999999999999999999999999999988763 589999999874333789
Q ss_pred cEEEEcccccch-----hhHHHHHHHHHHhcccCceEEEEecc
Q 018346 198 DRIYSIEMFEHM-----KNYQNLLKKISKWMKEDTLLFVHHFC 235 (357)
Q Consensus 198 D~Ii~~~~~~~~-----~~~~~~l~~~~~~LkpgG~l~~~~~~ 235 (357)
|+|++++++++. .....+++.+.++|||||.+++....
T Consensus 294 D~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~ 336 (375)
T 4dcm_A 294 NAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANR 336 (375)
T ss_dssp EEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEET
T ss_pred eEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEEC
Confidence 999999999853 22357899999999999999997643
No 88
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.67 E-value=1e-15 Score=135.06 Aligned_cols=111 Identities=20% Similarity=0.356 Sum_probs=95.3
Q ss_pred HHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccccCccE
Q 018346 120 LYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDR 199 (357)
Q Consensus 120 ~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~ 199 (357)
.+...+ .++.+|||+|||+|.++..+++. .+|+|+|+|+.+++.|+++....+. +++++.+|+.+.+.+++||+
T Consensus 26 ~~~~~~--~~~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~fD~ 99 (243)
T 3d2l_A 26 WVLEQV--EPGKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMETNR-HVDFWVQDMRELELPEPVDA 99 (243)
T ss_dssp HHHHHS--CTTCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHTTC-CCEEEECCGGGCCCSSCEEE
T ss_pred HHHHHc--CCCCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhcCC-ceEEEEcChhhcCCCCCcCE
Confidence 344443 35689999999999999998865 6999999999999999999887764 89999999988765678999
Q ss_pred EEEcc-cccch---hhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 200 IYSIE-MFEHM---KNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 200 Ii~~~-~~~~~---~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
|++.. +++|+ ++...+++++.++|+|||.+++..++.
T Consensus 100 v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 140 (243)
T 3d2l_A 100 ITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVHSP 140 (243)
T ss_dssp EEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred EEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCCH
Confidence 99986 88888 677889999999999999999977654
No 89
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.67 E-value=1.1e-16 Score=137.91 Aligned_cols=107 Identities=20% Similarity=0.278 Sum_probs=91.0
Q ss_pred CCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCC--CCeEEEEeccCCCcc---ccC-ccEEEE
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL--QNVEIIVADISTFEM---EAS-YDRIYS 202 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~--~~v~~~~~d~~~~~~---~~~-fD~Ii~ 202 (357)
++.+|||+|||+|.++..++... ..+|+|+|+|+.+++.|++++...++ ++++++++|+.+... .++ ||+|++
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 131 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQ-AKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFL 131 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEE
Confidence 57899999999999999877763 36999999999999999999999887 689999999876432 367 999999
Q ss_pred cccccchhhHHHHHHHH--HHhcccCceEEEEeccCC
Q 018346 203 IEMFEHMKNYQNLLKKI--SKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 203 ~~~~~~~~~~~~~l~~~--~~~LkpgG~l~~~~~~~~ 237 (357)
+++++ ..+...+++.+ .++|+|||.+++......
T Consensus 132 ~~~~~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 132 DPPFH-FNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp CCCSS-SCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred CCCCC-CccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 99965 56677888888 567999999999877654
No 90
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.67 E-value=2e-16 Score=133.03 Aligned_cols=119 Identities=8% Similarity=0.162 Sum_probs=96.2
Q ss_pred HHHHHHcC-CCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCC-cc-c
Q 018346 119 ELYCERSR-LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTF-EM-E 194 (357)
Q Consensus 119 ~~l~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~-~~-~ 194 (357)
+.+++.+. ..++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.|++++...+++ +++++.+|+.+. +. .
T Consensus 20 ~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 98 (177)
T 2esr_A 20 GAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLT 98 (177)
T ss_dssp HHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBC
T ss_pred HHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhc
Confidence 34444444 457789999999999999999987 4579999999999999999999988874 799999998773 21 2
Q ss_pred cCccEEEEcccccchhhHHHHHHHHH--HhcccCceEEEEeccCCCC
Q 018346 195 ASYDRIYSIEMFEHMKNYQNLLKKIS--KWMKEDTLLFVHHFCHKTF 239 (357)
Q Consensus 195 ~~fD~Ii~~~~~~~~~~~~~~l~~~~--~~LkpgG~l~~~~~~~~~~ 239 (357)
++||+|+++++++. ......++.+. ++|+|||.+++.+......
T Consensus 99 ~~fD~i~~~~~~~~-~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~~ 144 (177)
T 2esr_A 99 GRFDLVFLDPPYAK-ETIVATIEALAAKNLLSEQVMVVCETDKTVLL 144 (177)
T ss_dssp SCEEEEEECCSSHH-HHHHHHHHHHHHTTCEEEEEEEEEEEETTCCC
T ss_pred CCCCEEEECCCCCc-chHHHHHHHHHhCCCcCCCcEEEEEECCcccc
Confidence 67999999988742 45567777776 8999999999988766543
No 91
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.67 E-value=7.5e-16 Score=144.02 Aligned_cols=118 Identities=10% Similarity=0.090 Sum_probs=102.9
Q ss_pred HHHHHcCCCC-CCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCc--ccc
Q 018346 120 LYCERSRLED-GHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFE--MEA 195 (357)
Q Consensus 120 ~l~~~~~~~~-~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~--~~~ 195 (357)
.+++.++..+ +.+|||||||+|..+..+++.+|+.+++++|+ +.+++.++++....++. +++++.+|+.+.+ .++
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 247 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGG 247 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTC
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCC
Confidence 4566666666 88999999999999999999999999999999 88999999999888774 7999999999865 456
Q ss_pred CccEEEEcccccchhh--HHHHHHHHHHhcccCceEEEEeccCCC
Q 018346 196 SYDRIYSIEMFEHMKN--YQNLLKKISKWMKEDTLLFVHHFCHKT 238 (357)
Q Consensus 196 ~fD~Ii~~~~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~ 238 (357)
+||+|++..++|++++ ...+++++.+.|+|||++++..+..+.
T Consensus 248 ~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (352)
T 3mcz_A 248 AADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMND 292 (352)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCT
T ss_pred CccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 7999999999999965 489999999999999999998765543
No 92
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.66 E-value=9.1e-16 Score=131.77 Aligned_cols=108 Identities=15% Similarity=0.245 Sum_probs=93.3
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc-cCccEEEEcccc
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEMF 206 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~Ii~~~~~ 206 (357)
.++ +|||+|||+|..+..+++. +.+|+|+|+|+.+++.|+++....+. ++.++.+|+.+.+.+ ++||+|+++...
T Consensus 29 ~~~-~vLdiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~fD~v~~~~~~ 104 (202)
T 2kw5_A 29 PQG-KILCLAEGEGRNACFLASL--GYEVTAVDQSSVGLAKAKQLAQEKGV-KITTVQSNLADFDIVADAWEGIVSIFCH 104 (202)
T ss_dssp CSS-EEEECCCSCTHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHTC-CEEEECCBTTTBSCCTTTCSEEEEECCC
T ss_pred CCC-CEEEECCCCCHhHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcChhhcCCCcCCccEEEEEhhc
Confidence 356 9999999999999999976 67999999999999999999988877 899999999887654 789999996543
Q ss_pred cchhhHHHHHHHHHHhcccCceEEEEeccCCCC
Q 018346 207 EHMKNYQNLLKKISKWMKEDTLLFVHHFCHKTF 239 (357)
Q Consensus 207 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 239 (357)
.+..+...+++++.++|||||.+++..+.....
T Consensus 105 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 137 (202)
T 2kw5_A 105 LPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQL 137 (202)
T ss_dssp CCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTG
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEEEeccccc
Confidence 334678899999999999999999998876543
No 93
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.66 E-value=2.3e-15 Score=141.71 Aligned_cols=120 Identities=18% Similarity=0.176 Sum_probs=104.5
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEEeccCCCcccc
Q 018346 117 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEMEA 195 (357)
Q Consensus 117 ~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~ 195 (357)
....+++..+..++.+|||+|||+|..+..+++.+|+.+++++|+ +.+++.|++++...++ ++|+|+.+|+.+ +.+.
T Consensus 190 ~~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~-~~p~ 267 (369)
T 3gwz_A 190 EAGQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFE-TIPD 267 (369)
T ss_dssp HHHHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTT-CCCS
T ss_pred hHHHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCC-CCCC
Confidence 345667777777889999999999999999999999999999999 9999999999988876 489999999984 3334
Q ss_pred CccEEEEcccccchhhHH--HHHHHHHHhcccCceEEEEeccCCC
Q 018346 196 SYDRIYSIEMFEHMKNYQ--NLLKKISKWMKEDTLLFVHHFCHKT 238 (357)
Q Consensus 196 ~fD~Ii~~~~~~~~~~~~--~~l~~~~~~LkpgG~l~~~~~~~~~ 238 (357)
+||+|++..+++++++.. ++++++.+.|+|||++++..+..+.
T Consensus 268 ~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~ 312 (369)
T 3gwz_A 268 GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDE 312 (369)
T ss_dssp SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCS
T ss_pred CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 899999999999997654 7999999999999999998775543
No 94
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.66 E-value=1e-15 Score=138.06 Aligned_cols=122 Identities=11% Similarity=0.089 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHHcC-CCCCCEEEEECCcc---cHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEecc
Q 018346 113 AEKAMLELYCERSR-LEDGHTVLDVGCGW---GSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADI 188 (357)
Q Consensus 113 ~~~~~l~~l~~~~~-~~~~~~vLDiGcG~---G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~ 188 (357)
.+...+..+++.+. ..+..+|||||||+ |.++..+++..|+.+|+++|+|+.+++.|++++... ++++++.+|+
T Consensus 60 ~~~~~~~~~~~~l~~~~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~--~~v~~~~~D~ 137 (274)
T 2qe6_A 60 ENRKVLVRGVRFLAGEAGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKD--PNTAVFTADV 137 (274)
T ss_dssp HHHHHHHHHHHHHHTTTCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTC--TTEEEEECCT
T ss_pred HHhHHHHHHHHHHhhccCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCC--CCeEEEEeeC
Confidence 34445555555543 23457999999999 998887877788999999999999999999987432 4899999999
Q ss_pred CCCc-----------cc-cCccEEEEcccccchhh--HHHHHHHHHHhcccCceEEEEeccC
Q 018346 189 STFE-----------ME-ASYDRIYSIEMFEHMKN--YQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 189 ~~~~-----------~~-~~fD~Ii~~~~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
.+.. ++ .+||+|+++.++|++++ ...+++++.++|+|||.+++.....
T Consensus 138 ~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 138 RDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp TCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred CCchhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 7631 11 47999999999999976 8999999999999999999988765
No 95
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.66 E-value=2.4e-16 Score=144.00 Aligned_cols=117 Identities=10% Similarity=0.219 Sum_probs=97.9
Q ss_pred HHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCC---CCeEEEEeccCCCcccc
Q 018346 119 ELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL---QNVEIIVADISTFEMEA 195 (357)
Q Consensus 119 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~---~~v~~~~~d~~~~~~~~ 195 (357)
..+++.+...+ .+|||||||+|.++..+++. +.+|+|+|+|+.+++.|++++...+. .+++++++|+.+++.++
T Consensus 73 ~~~~~~~~~~~-~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 149 (299)
T 3g2m_A 73 REFATRTGPVS-GPVLELAAGMGRLTFPFLDL--GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFALDK 149 (299)
T ss_dssp HHHHHHHCCCC-SCEEEETCTTTTTHHHHHTT--TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCCSC
T ss_pred HHHHHhhCCCC-CcEEEEeccCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCcCC
Confidence 34445554433 49999999999999999987 68999999999999999999987763 48999999999987678
Q ss_pred CccEEEEc-ccccchh--hHHHHHHHHHHhcccCceEEEEeccCCC
Q 018346 196 SYDRIYSI-EMFEHMK--NYQNLLKKISKWMKEDTLLFVHHFCHKT 238 (357)
Q Consensus 196 ~fD~Ii~~-~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 238 (357)
+||+|++. .++++++ +...+++++.++|||||.+++.+++...
T Consensus 150 ~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 195 (299)
T 3g2m_A 150 RFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEA 195 (299)
T ss_dssp CEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHH
T ss_pred CcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCcc
Confidence 89988865 6677664 4689999999999999999999887654
No 96
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.66 E-value=5.4e-16 Score=134.59 Aligned_cols=115 Identities=25% Similarity=0.276 Sum_probs=97.7
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-c
Q 018346 117 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-E 194 (357)
Q Consensus 117 ~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-~ 194 (357)
....+++.+...++.+|||+|||+|.++..+++.. |..+|+++|+|+.+++.++++....+.+++++..+|+..... .
T Consensus 65 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 144 (215)
T 2yxe_A 65 MVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPL 144 (215)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGG
T ss_pred HHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCC
Confidence 34456666677788999999999999999999886 558999999999999999999988888789999999865333 3
Q ss_pred cCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEeccCC
Q 018346 195 ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 195 ~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 237 (357)
++||+|+++.+++++. +.+.++|||||++++..+...
T Consensus 145 ~~fD~v~~~~~~~~~~------~~~~~~L~pgG~lv~~~~~~~ 181 (215)
T 2yxe_A 145 APYDRIYTTAAGPKIP------EPLIRQLKDGGKLLMPVGRYL 181 (215)
T ss_dssp CCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEESSSS
T ss_pred CCeeEEEECCchHHHH------HHHHHHcCCCcEEEEEECCCC
Confidence 6899999999999886 478899999999999887653
No 97
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.66 E-value=2.8e-16 Score=139.04 Aligned_cols=102 Identities=23% Similarity=0.279 Sum_probs=90.7
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc----ccCccEEEEc
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----EASYDRIYSI 203 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~----~~~fD~Ii~~ 203 (357)
.++.+|||+|||+|..+..++...|+.+|+|+|+|+.+++.|++++...++++++++++|+.+++. .++||+|++.
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTAR 148 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEe
Confidence 467899999999999999999877889999999999999999999999888789999999877543 3689999997
Q ss_pred ccccchhhHHHHHHHHHHhcccCceEEEEe
Q 018346 204 EMFEHMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 204 ~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
.+ .++..+++.+.++|+|||.+++..
T Consensus 149 ~~----~~~~~~l~~~~~~LkpgG~l~~~~ 174 (240)
T 1xdz_A 149 AV----ARLSVLSELCLPLVKKNGLFVALK 174 (240)
T ss_dssp CC----SCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred cc----CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 63 568899999999999999998853
No 98
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.66 E-value=4.6e-17 Score=140.84 Aligned_cols=118 Identities=17% Similarity=0.182 Sum_probs=78.3
Q ss_pred HHHHHHHHHcCC-CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc
Q 018346 116 AMLELYCERSRL-EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME 194 (357)
Q Consensus 116 ~~l~~l~~~~~~-~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~ 194 (357)
.+++.+++.+.. .++.+|||+|||+|.++..+++.+|+.+|+|+|+|+.+++.|++++...+. +++++++|+.+....
T Consensus 16 ~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~ 94 (215)
T 4dzr_A 16 VLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA-VVDWAAADGIEWLIE 94 (215)
T ss_dssp HHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC--------------------CCHHHHHHHHHH
T ss_pred HHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC-ceEEEEcchHhhhhh
Confidence 355556666554 678899999999999999999998888999999999999999999988877 899999998873222
Q ss_pred -----cCccEEEEcccccchhh--------------------------HHHHHHHHHHhcccCce-EEEEec
Q 018346 195 -----ASYDRIYSIEMFEHMKN--------------------------YQNLLKKISKWMKEDTL-LFVHHF 234 (357)
Q Consensus 195 -----~~fD~Ii~~~~~~~~~~--------------------------~~~~l~~~~~~LkpgG~-l~~~~~ 234 (357)
++||+|++++++..... +..+++++.++|||||+ +++...
T Consensus 95 ~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 166 (215)
T 4dzr_A 95 RAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG 166 (215)
T ss_dssp HHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT
T ss_pred hhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC
Confidence 68999999988754422 27788899999999999 555443
No 99
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.66 E-value=8.5e-16 Score=142.50 Aligned_cols=115 Identities=11% Similarity=0.070 Sum_probs=99.5
Q ss_pred HHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEEeccCCCccccCccE
Q 018346 121 YCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEMEASYDR 199 (357)
Q Consensus 121 l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~fD~ 199 (357)
+++..+..+..+|||+|||+|..+..+++.+|+.+++++|+ +.+++.|++++...++ ++|+|..+|+.+ +.+.+||+
T Consensus 161 ~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~p~~~D~ 238 (332)
T 3i53_A 161 IAAKYDWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFD-PLPAGAGG 238 (332)
T ss_dssp GGGSSCCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCCCSCSE
T ss_pred HHHhCCCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCC-CCCCCCcE
Confidence 33444555678999999999999999999999999999999 9999999999988887 489999999974 33348999
Q ss_pred EEEcccccchhh--HHHHHHHHHHhcccCceEEEEeccCC
Q 018346 200 IYSIEMFEHMKN--YQNLLKKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 200 Ii~~~~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~ 237 (357)
|++..++|++++ ..++++++.++|+|||++++..+..+
T Consensus 239 v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 278 (332)
T 3i53_A 239 YVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAG 278 (332)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC
T ss_pred EEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCC
Confidence 999999999976 48899999999999999999876543
No 100
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.66 E-value=4.2e-16 Score=141.97 Aligned_cols=109 Identities=19% Similarity=0.246 Sum_probs=86.6
Q ss_pred CCCCEEEEECCcccHHHHH----HHHHCCCcEE--EEEcCCHHHHHHHHHHHHHc-CCCCeEEE--EeccCCCc------
Q 018346 128 EDGHTVLDVGCGWGSLSLY----IAQKYSNCKI--TGICNSKTQKEFIEEQCRVL-ELQNVEII--VADISTFE------ 192 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~----la~~~p~~~v--~~vD~s~~~l~~a~~~~~~~-~~~~v~~~--~~d~~~~~------ 192 (357)
.++.+|||||||+|.++.. ++..+|+..| +|+|+|++|++.|++++... +++++.+. .++..+++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 4677999999999987654 3445567754 99999999999999988754 45566554 44444332
Q ss_pred c-ccCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 193 M-EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 193 ~-~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
+ +++||+|+++.+++|++++..+++++.++|||||++++..++.
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 175 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSG 175 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECT
T ss_pred cCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 1 3689999999999999999999999999999999999986653
No 101
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.66 E-value=5.1e-16 Score=131.47 Aligned_cols=118 Identities=14% Similarity=0.135 Sum_probs=94.7
Q ss_pred HHHHHcC-CCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEEeccCCCcc----
Q 018346 120 LYCERSR-LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEM---- 193 (357)
Q Consensus 120 ~l~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~---- 193 (357)
.+++.+. ..++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.|++++...++ ++++++++|+.+...
T Consensus 34 ~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 112 (187)
T 2fhp_A 34 SIFNMIGPYFDGGMALDLYSGSGGLAIEAVSR-GMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYE 112 (187)
T ss_dssp HHHHHHCSCCSSCEEEETTCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHhhcCCCCEEEeCCccCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHh
Confidence 3444442 346789999999999999998875 357999999999999999999998887 479999999877421
Q ss_pred -ccCccEEEEcccccchhhHHHHHHHH--HHhcccCceEEEEeccCCCC
Q 018346 194 -EASYDRIYSIEMFEHMKNYQNLLKKI--SKWMKEDTLLFVHHFCHKTF 239 (357)
Q Consensus 194 -~~~fD~Ii~~~~~~~~~~~~~~l~~~--~~~LkpgG~l~~~~~~~~~~ 239 (357)
.++||+|+++++++ .......++.+ .++|+|||.+++.++.....
T Consensus 113 ~~~~fD~i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~~ 160 (187)
T 2fhp_A 113 EKLQFDLVLLDPPYA-KQEIVSQLEKMLERQLLTNEAVIVCETDKTVKL 160 (187)
T ss_dssp TTCCEEEEEECCCGG-GCCHHHHHHHHHHTTCEEEEEEEEEEEETTCCC
T ss_pred cCCCCCEEEECCCCC-chhHHHHHHHHHHhcccCCCCEEEEEeCCcccc
Confidence 36899999999865 34556677777 78899999999988766543
No 102
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.65 E-value=4.7e-16 Score=139.30 Aligned_cols=115 Identities=13% Similarity=0.230 Sum_probs=96.0
Q ss_pred HHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHH---cCCC-CeEEEEeccCCCc-----
Q 018346 122 CERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRV---LELQ-NVEIIVADISTFE----- 192 (357)
Q Consensus 122 ~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~---~~~~-~v~~~~~d~~~~~----- 192 (357)
.......++.+|||+|||+|.++..++...|+.+|+|+|+++.+++.|++++.. +++. +++++++|+.+..
T Consensus 29 ~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~ 108 (260)
T 2ozv_A 29 ASLVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVE 108 (260)
T ss_dssp HHTCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHH
T ss_pred HHHhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhh
Confidence 344556678899999999999999999998889999999999999999999988 7774 6999999998862
Q ss_pred --c-ccCccEEEEcccccch------------------hhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 193 --M-EASYDRIYSIEMFEHM------------------KNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 193 --~-~~~fD~Ii~~~~~~~~------------------~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
. .++||+|++++++... .....+++.+.++|||||.+++..+..
T Consensus 109 ~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 173 (260)
T 2ozv_A 109 AGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQ 173 (260)
T ss_dssp TTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGG
T ss_pred hccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHH
Confidence 2 3689999999887543 236788999999999999999976543
No 103
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.65 E-value=1e-15 Score=139.36 Aligned_cols=109 Identities=17% Similarity=0.190 Sum_probs=95.9
Q ss_pred CCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEEeccCCCcc--ccCccEEEEc
Q 018346 127 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEM--EASYDRIYSI 203 (357)
Q Consensus 127 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~--~~~fD~Ii~~ 203 (357)
+.++.+|||+|||+|..+..+++. +..+|+|+|+|+.+++.|+++....+. .++.++++|+.+.+. .++||+|++.
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~ 140 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQ 140 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEEC
Confidence 457889999999999999998877 345999999999999999999988776 379999999998765 3789999999
Q ss_pred ccccc----hhhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 204 EMFEH----MKNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 204 ~~~~~----~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
.++++ .++...+++++.++|||||.+++.+++.
T Consensus 141 ~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 177 (298)
T 1ri5_A 141 FSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSR 177 (298)
T ss_dssp SCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred chhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 99976 5778899999999999999999998765
No 104
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.65 E-value=1.4e-15 Score=142.26 Aligned_cols=120 Identities=14% Similarity=0.099 Sum_probs=102.9
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc-
Q 018346 117 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME- 194 (357)
Q Consensus 117 ~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~- 194 (357)
+...++......++.+|||+|||+|.+++.++... |+.+|+|+|+|+.+++.|++|+...|+++++|.++|+.+++.+
T Consensus 191 la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~ 270 (354)
T 3tma_A 191 LAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFF 270 (354)
T ss_dssp HHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTC
T ss_pred HHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCcccc
Confidence 33445666677788999999999999999999986 7789999999999999999999999987899999999987654
Q ss_pred cCccEEEEcccccch--------hhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 195 ASYDRIYSIEMFEHM--------KNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 195 ~~fD~Ii~~~~~~~~--------~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
+.||+|++++++... ..+..+++.+.++|+|||.+++.++..
T Consensus 271 ~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~ 320 (354)
T 3tma_A 271 PEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRP 320 (354)
T ss_dssp CCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCH
T ss_pred CCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 678999999997542 225789999999999999999987754
No 105
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.65 E-value=1.6e-15 Score=133.47 Aligned_cols=103 Identities=12% Similarity=0.277 Sum_probs=89.1
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccccCccEEEE-cccc
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYS-IEMF 206 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~Ii~-~~~~ 206 (357)
.++.+|||+|||+|..+..+++.+ .+|+|+|+|+.+++.|+++. ++++++.+|+.+.+.+++||+|+| ..++
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~~D~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~~~~~D~v~~~~~~~ 111 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF--GDTAGLELSEDMLTHARKRL-----PDATLHQGDMRDFRLGRKFSAVVSMFSSV 111 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH--SEEEEEESCHHHHHHHHHHC-----TTCEEEECCTTTCCCSSCEEEEEECTTGG
T ss_pred CCCCeEEEecccCCHHHHHHHHhC--CcEEEEeCCHHHHHHHHHhC-----CCCEEEECCHHHcccCCCCcEEEEcCchH
Confidence 467899999999999999999885 49999999999999998864 378999999988765678999995 4588
Q ss_pred cch---hhHHHHHHHHHHhcccCceEEEEeccCC
Q 018346 207 EHM---KNYQNLLKKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 207 ~~~---~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 237 (357)
+|+ ++...+++++.++|+|||.+++..+...
T Consensus 112 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 145 (239)
T 3bxo_A 112 GYLKTTEELGAAVASFAEHLEPGGVVVVEPWWFP 145 (239)
T ss_dssp GGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCCT
T ss_pred hhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccCc
Confidence 888 5678899999999999999999876554
No 106
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.65 E-value=3.1e-15 Score=140.20 Aligned_cols=118 Identities=16% Similarity=0.213 Sum_probs=103.6
Q ss_pred HHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCccccC
Q 018346 118 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEMEAS 196 (357)
Q Consensus 118 l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~ 196 (357)
...+++.++..++.+|||||||+|..+..+++.+|+.+++++|+ +.+++.|++++...+++ +++++.+|+.+.+.+ .
T Consensus 179 ~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~ 256 (359)
T 1x19_A 179 IQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYP-E 256 (359)
T ss_dssp HHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCC-C
T ss_pred HHHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCC-C
Confidence 44566777777889999999999999999999999999999999 99999999999988775 699999999886544 3
Q ss_pred ccEEEEcccccchhh--HHHHHHHHHHhcccCceEEEEeccCC
Q 018346 197 YDRIYSIEMFEHMKN--YQNLLKKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 197 fD~Ii~~~~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~ 237 (357)
+|+|++..+++++++ ...+++++.++|||||++++..+..+
T Consensus 257 ~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 299 (359)
T 1x19_A 257 ADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVID 299 (359)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCC
T ss_pred CCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccC
Confidence 499999999999966 78999999999999999988776543
No 107
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.64 E-value=1.9e-16 Score=138.71 Aligned_cols=107 Identities=17% Similarity=0.158 Sum_probs=83.8
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCC-HHHHHHH---HHHHHHcCCCCeEEEEeccCCCccc--cCccEEE
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNS-KTQKEFI---EEQCRVLELQNVEIIVADISTFEME--ASYDRIY 201 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s-~~~l~~a---~~~~~~~~~~~v~~~~~d~~~~~~~--~~fD~Ii 201 (357)
.++.+|||||||+|.++..+++..|+.+|+|+|+| +.+++.| ++++...+++++.|+++|+.+++.. +.+|.|.
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~ 102 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSIS 102 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEE
Confidence 46789999999999999999988888999999999 6666665 7777777877899999999987532 4455555
Q ss_pred Ecccccch-----hhHHHHHHHHHHhcccCceEEEEec
Q 018346 202 SIEMFEHM-----KNYQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 202 ~~~~~~~~-----~~~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
++.+.... .+...+++++.++|||||.+++.+.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~ 140 (225)
T 3p2e_A 103 ILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTT 140 (225)
T ss_dssp EESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEEC
T ss_pred EeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEe
Confidence 55443221 2335689999999999999999443
No 108
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.64 E-value=1.2e-15 Score=140.25 Aligned_cols=108 Identities=16% Similarity=0.131 Sum_probs=92.1
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHc-------CCCCeEEEEeccCCCc----c---
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL-------ELQNVEIIVADISTFE----M--- 193 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~-------~~~~v~~~~~d~~~~~----~--- 193 (357)
.++.+|||+|||+|..+..+++. +..+|+|+|+|+.+++.|+++.... +..+++++++|+.+.+ +
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 111 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKG-RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDP 111 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSST
T ss_pred CCCCEEEEECCCCcHHHHHHHhc-CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccC
Confidence 36789999999999999999874 4779999999999999999988764 3347999999998864 3
Q ss_pred ccCccEEEEcccccch----hhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 194 EASYDRIYSIEMFEHM----KNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 194 ~~~fD~Ii~~~~~~~~----~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
.++||+|+++.+++++ ++...+++++.++|||||.+++.+++.
T Consensus 112 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 112 QMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp TCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred CCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 2489999999999887 456799999999999999999998865
No 109
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.64 E-value=6.2e-16 Score=133.17 Aligned_cols=108 Identities=15% Similarity=0.263 Sum_probs=90.6
Q ss_pred CCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCC-ccc-cCccEEEEcccc
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF-EME-ASYDRIYSIEMF 206 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~-~~~-~~fD~Ii~~~~~ 206 (357)
++.+|||+|||+|.++..++... ..+|+++|+|+.+++.|++++...++++++++++|+.+. +.. ++||+|++++++
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~-~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~ 132 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY-AAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPF 132 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSS
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCC
Confidence 57899999999999999888764 359999999999999999999998887899999998763 322 689999999996
Q ss_pred cchhhHHHHHHHHHH--hcccCceEEEEeccCCC
Q 018346 207 EHMKNYQNLLKKISK--WMKEDTLLFVHHFCHKT 238 (357)
Q Consensus 207 ~~~~~~~~~l~~~~~--~LkpgG~l~~~~~~~~~ 238 (357)
+ ......+++.+.+ +|+|||++++.+.....
T Consensus 133 ~-~~~~~~~l~~l~~~~~L~pgG~l~i~~~~~~~ 165 (202)
T 2fpo_A 133 R-RGLLEETINLLEDNGWLADEALIYVESEVENG 165 (202)
T ss_dssp S-TTTHHHHHHHHHHTTCEEEEEEEEEEEEGGGC
T ss_pred C-CCcHHHHHHHHHhcCccCCCcEEEEEECCCcc
Confidence 5 4567778888876 49999999998775543
No 110
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.64 E-value=2.3e-16 Score=137.51 Aligned_cols=159 Identities=19% Similarity=0.228 Sum_probs=114.2
Q ss_pred CCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCC---ccc--cCccEE
Q 018346 126 RLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF---EME--ASYDRI 200 (357)
Q Consensus 126 ~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~---~~~--~~fD~I 200 (357)
...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++ .++.+...|+.++ +.. .+||+|
T Consensus 49 ~~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~~~~~~fD~v 120 (227)
T 3e8s_A 49 LGRQPERVLDLGCGEGWLLRALADR--GIEAVGVDGDRTLVDAARAA------GAGEVHLASYAQLAEAKVPVGKDYDLI 120 (227)
T ss_dssp HHTCCSEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHT------CSSCEEECCHHHHHTTCSCCCCCEEEE
T ss_pred hcCCCCEEEEeCCCCCHHHHHHHHC--CCEEEEEcCCHHHHHHHHHh------cccccchhhHHhhcccccccCCCccEE
Confidence 3346689999999999999999987 77999999999999999876 2677888887765 222 459999
Q ss_pred EEcccccchhhHHHHHHHHHHhcccCceEEEEeccCCCCCcccccCCccchhhhcccCCCCCCCHHHHHhhcCCcEEEEe
Q 018346 201 YSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHKTFAYHFEDTNDDDWITKYFFTGGTMPSANLLLYFQDDVSVVDH 280 (357)
Q Consensus 201 i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 280 (357)
+++.+++ .++...+++++.++|||||++++.+++........ -...|....+..- ..... .
T Consensus 121 ~~~~~l~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~------------~~~~~-~-- 181 (227)
T 3e8s_A 121 CANFALL-HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGD---YQDGWREESFAGF------------AGDWQ-P-- 181 (227)
T ss_dssp EEESCCC-SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTC---CSCEEEEECCTTS------------SSCCC-C--
T ss_pred EECchhh-hhhHHHHHHHHHHHhCCCeEEEEEecCccccCccc---cccccchhhhhcc------------ccCcc-c--
Confidence 9999999 78889999999999999999999988765433210 0122222111000 00000 0
Q ss_pred EEecCccHHHHHHHHHHHHHhcHHHHHHHHHhcCC
Q 018346 281 WLVNGKHYAQTSEEWLKRMDNNLASIKPIMESTYG 315 (357)
Q Consensus 281 w~~~g~~y~~tl~~w~~~l~~~~~~~~~~~~~~~~ 315 (357)
...+..+..+|.+.+.++|+++.+..++.++
T Consensus 182 ----~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~ 212 (227)
T 3e8s_A 182 ----MPWYFRTLASWLNALDMAGLRLVSLQEPQHP 212 (227)
T ss_dssp ----EEEEECCHHHHHHHHHHTTEEEEEEECCCCT
T ss_pred ----ceEEEecHHHHHHHHHHcCCeEEEEecCCCC
Confidence 0112357888999999999998876554444
No 111
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.64 E-value=8.1e-16 Score=140.61 Aligned_cols=108 Identities=10% Similarity=0.057 Sum_probs=87.2
Q ss_pred CCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCC------CeEEEEeccCC------C--cc-
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ------NVEIIVADIST------F--EM- 193 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~------~v~~~~~d~~~------~--~~- 193 (357)
++.+|||||||+|..+..++... +.+|+|+|+|+.+++.|++++...+.. +++|.+.|+.. + +.
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~-~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGE-IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCeEEEEecCCcHhHHHHHhcC-CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 47899999999998776666542 579999999999999999998776542 26788888722 1 11
Q ss_pred ccCccEEEEcccccch---hhHHHHHHHHHHhcccCceEEEEeccCC
Q 018346 194 EASYDRIYSIEMFEHM---KNYQNLLKKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 194 ~~~fD~Ii~~~~~~~~---~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 237 (357)
.++||+|+|..++|++ .+...+++++.++|||||++++.+++..
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~ 173 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGD 173 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHH
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHH
Confidence 2689999999999875 4568999999999999999999988654
No 112
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.64 E-value=2e-15 Score=130.75 Aligned_cols=106 Identities=19% Similarity=0.115 Sum_probs=85.1
Q ss_pred cCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCC----ccccCccEE
Q 018346 125 SRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF----EMEASYDRI 200 (357)
Q Consensus 125 ~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~----~~~~~fD~I 200 (357)
+.+.++.+|||+|||+|..+..+++..++.+|+|+|+|+.+++.+.+.++.. +++.++.+|+... +..++||+|
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~--~~v~~~~~d~~~~~~~~~~~~~fD~V 130 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER--NNIIPLLFDASKPWKYSGIVEKVDLI 130 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC--SSEEEECSCTTCGGGTTTTCCCEEEE
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC--CCeEEEEcCCCCchhhcccccceeEE
Confidence 4566889999999999999999999876679999999999988777766543 3899999998763 233789999
Q ss_pred EEcccccchhhHHHHHHHHHHhcccCceEEEEec
Q 018346 201 YSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 201 i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
+++... -.....+++++.++|||||.+++...
T Consensus 131 ~~~~~~--~~~~~~~l~~~~r~LkpgG~l~i~~~ 162 (210)
T 1nt2_A 131 YQDIAQ--KNQIEILKANAEFFLKEKGEVVIMVK 162 (210)
T ss_dssp EECCCS--TTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEeccC--hhHHHHHHHHHHHHhCCCCEEEEEEe
Confidence 998422 23344568999999999999999854
No 113
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.64 E-value=2.2e-15 Score=142.01 Aligned_cols=114 Identities=17% Similarity=0.107 Sum_probs=99.9
Q ss_pred HHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCccccCc
Q 018346 119 ELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEMEASY 197 (357)
Q Consensus 119 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~f 197 (357)
..+++.+...++.+|||||||+|.++..+++.+|+.+++++|+ +.+++.|++++...++. +++++.+|+.+ +.+..|
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~ 249 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLPVTA 249 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSCCE
T ss_pred HHHHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCCCCC
Confidence 3455666667789999999999999999999999899999999 99999999999888875 89999999976 333459
Q ss_pred cEEEEcccccchhhH--HHHHHHHHHhcccCceEEEEec
Q 018346 198 DRIYSIEMFEHMKNY--QNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 198 D~Ii~~~~~~~~~~~--~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
|+|+++.+++++++. ..+++++.++|+|||++++..+
T Consensus 250 D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 250 DVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 999999999999665 4899999999999999998776
No 114
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.64 E-value=1.4e-15 Score=133.43 Aligned_cols=111 Identities=19% Similarity=0.244 Sum_probs=94.6
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCC-cccc
Q 018346 117 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF-EMEA 195 (357)
Q Consensus 117 ~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~-~~~~ 195 (357)
.+..+++.+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++....+ +++++.+|+.+. +..+
T Consensus 58 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~--~v~~~~~d~~~~~~~~~ 133 (231)
T 1vbf_A 58 LGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEI--VDKVVSVEINEKMYNYASKLLSYYN--NIKLILGDGTLGYEEEK 133 (231)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHTTCS--SEEEEESCGGGCCGGGC
T ss_pred HHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHH--cCEEEEEeCCHHHHHHHHHHHhhcC--CeEEEECCcccccccCC
Confidence 4555667777788899999999999999999988 4799999999999999999987665 899999999873 3237
Q ss_pred CccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEeccCC
Q 018346 196 SYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 196 ~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 237 (357)
+||+|+++.+++++. +.+.++|+|||++++..++..
T Consensus 134 ~fD~v~~~~~~~~~~------~~~~~~L~pgG~l~~~~~~~~ 169 (231)
T 1vbf_A 134 PYDRVVVWATAPTLL------CKPYEQLKEGGIMILPIGVGR 169 (231)
T ss_dssp CEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEECSSS
T ss_pred CccEEEECCcHHHHH------HHHHHHcCCCcEEEEEEcCCC
Confidence 899999999999885 368899999999999877553
No 115
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.64 E-value=3.4e-16 Score=130.50 Aligned_cols=106 Identities=12% Similarity=0.168 Sum_probs=89.2
Q ss_pred CCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc--c---cCccEEEEc
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM--E---ASYDRIYSI 203 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~--~---~~fD~Ii~~ 203 (357)
++.+|||+|||+|.++..+++.. ..|+|+|+|+.+++.|++++...++ +++++++|+.+... . ++||+|+++
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~D~i~~~ 117 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEG--WEAVLVEKDPEAVRLLKENVRRTGL-GARVVALPVEVFLPEAKAQGERFTVAFMA 117 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTT--CEEEEECCCHHHHHHHHHHHHHHTC-CCEEECSCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeCCCcCHHHHHHHHCC--CeEEEEeCCHHHHHHHHHHHHHcCC-ceEEEeccHHHHHHhhhccCCceEEEEEC
Confidence 67899999999999999999884 4599999999999999999998888 89999999877321 1 279999999
Q ss_pred ccccchhhHHHHHHHHH--HhcccCceEEEEeccCCCC
Q 018346 204 EMFEHMKNYQNLLKKIS--KWMKEDTLLFVHHFCHKTF 239 (357)
Q Consensus 204 ~~~~~~~~~~~~l~~~~--~~LkpgG~l~~~~~~~~~~ 239 (357)
++++ ......++.+. ++|+|||.+++.++.....
T Consensus 118 ~~~~--~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~~~ 153 (171)
T 1ws6_A 118 PPYA--MDLAALFGELLASGLVEAGGLYVLQHPKDLYL 153 (171)
T ss_dssp CCTT--SCTTHHHHHHHHHTCEEEEEEEEEEEETTSCC
T ss_pred CCCc--hhHHHHHHHHHhhcccCCCcEEEEEeCCccCC
Confidence 9886 45556677776 9999999999988766543
No 116
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.64 E-value=6.3e-16 Score=137.56 Aligned_cols=117 Identities=15% Similarity=0.149 Sum_probs=94.2
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHH--CCCcEEEEEcCCHHHHHHHHHHHHHc---CCC-C---------
Q 018346 116 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQK--YSNCKITGICNSKTQKEFIEEQCRVL---ELQ-N--------- 180 (357)
Q Consensus 116 ~~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~--~p~~~v~~vD~s~~~l~~a~~~~~~~---~~~-~--------- 180 (357)
.++..+++.+...++.+|||+|||+|.++..++.. .++.+|+|+|+|+.+++.|++++... ++. +
T Consensus 38 ~l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~ 117 (250)
T 1o9g_A 38 EIFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSE 117 (250)
T ss_dssp HHHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhh
Confidence 45566666554446789999999999999999988 66789999999999999999887755 332 1
Q ss_pred ----------------eE-------------EEEeccCCCcc-----c-cCccEEEEcccccch---------hhHHHHH
Q 018346 181 ----------------VE-------------IIVADISTFEM-----E-ASYDRIYSIEMFEHM---------KNYQNLL 216 (357)
Q Consensus 181 ----------------v~-------------~~~~d~~~~~~-----~-~~fD~Ii~~~~~~~~---------~~~~~~l 216 (357)
++ |.++|+.+... . .+||+|++++++.+. ..+..++
T Consensus 118 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l 197 (250)
T 1o9g_A 118 RFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLL 197 (250)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHH
T ss_pred hcccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHH
Confidence 66 99999987431 3 489999999987654 3456899
Q ss_pred HHHHHhcccCceEEEE
Q 018346 217 KKISKWMKEDTLLFVH 232 (357)
Q Consensus 217 ~~~~~~LkpgG~l~~~ 232 (357)
+++.++|+|||++++.
T Consensus 198 ~~~~~~LkpgG~l~~~ 213 (250)
T 1o9g_A 198 RSLASALPAHAVIAVT 213 (250)
T ss_dssp HHHHHHSCTTCEEEEE
T ss_pred HHHHHhcCCCcEEEEe
Confidence 9999999999999984
No 117
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.63 E-value=2.1e-17 Score=146.15 Aligned_cols=103 Identities=15% Similarity=0.169 Sum_probs=92.6
Q ss_pred CCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEEeccCCCccccCccEEEEccccc
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEMEASYDRIYSIEMFE 207 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~fD~Ii~~~~~~ 207 (357)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++...++ ++++++++|+.+.+..++||+|+++++++
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~ 155 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALT--GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKADVVFLSPPWG 155 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGCCCSEEEECCCCS
T ss_pred CCCEEEECccccCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccCCCCEEEECCCcC
Confidence 6789999999999999999987 68999999999999999999999988 58999999998876457899999999999
Q ss_pred chhhHHHHHHHHHHhcccCceEEEEe
Q 018346 208 HMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 208 ~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
+..+....+.++.++|+|||.+++..
T Consensus 156 ~~~~~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 156 GPDYATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp SGGGGGSSSBCTTTSCSSCHHHHHHH
T ss_pred CcchhhhHHHHHHhhcCCcceeHHHH
Confidence 98777667788899999999977654
No 118
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.63 E-value=2.7e-15 Score=140.91 Aligned_cols=109 Identities=13% Similarity=0.210 Sum_probs=95.9
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEEeccCCC--ccccCccEEEEcc
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTF--EMEASYDRIYSIE 204 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~--~~~~~fD~Ii~~~ 204 (357)
.++.+|||||||+|..+..+++.+|+.+++++|+ +.+++.|++++...++ ++|+++.+|+.+. +.+++||+|++..
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~~~ 256 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWMSQ 256 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEEES
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEEec
Confidence 3568999999999999999999999999999999 9999999999887776 4899999999885 3447899999999
Q ss_pred cccchhh--HHHHHHHHHHhcccCceEEEEeccCC
Q 018346 205 MFEHMKN--YQNLLKKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 205 ~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~ 237 (357)
++|++++ ...+++++.+.|||||++++..+..+
T Consensus 257 vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 291 (363)
T 3dp7_A 257 FLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWD 291 (363)
T ss_dssp CSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTT
T ss_pred hhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccC
Confidence 9998854 46889999999999999999776543
No 119
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.63 E-value=2.1e-15 Score=131.70 Aligned_cols=118 Identities=12% Similarity=0.153 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCC-CcEEEEEcCCHHHHHHHHHHHHHcCCC--CeEEEEeccCC
Q 018346 114 EKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQ--NVEIIVADIST 190 (357)
Q Consensus 114 ~~~~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~~vD~s~~~l~~a~~~~~~~~~~--~v~~~~~d~~~ 190 (357)
...++..++...+..++.+|||||||+|..+..+++..| +.+|+++|+|+.+++.|++++...++. +++++.+|+.+
T Consensus 41 ~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~ 120 (221)
T 3dr5_A 41 TGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLD 120 (221)
T ss_dssp HHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHH
T ss_pred HHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHH
Confidence 345666666665544556999999999999999999874 789999999999999999999998875 79999999876
Q ss_pred Cc--c-ccCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEec
Q 018346 191 FE--M-EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 191 ~~--~-~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
.. . .++||+|++.... .++..+++.+.++|||||++++...
T Consensus 121 ~l~~~~~~~fD~V~~d~~~---~~~~~~l~~~~~~LkpGG~lv~dn~ 164 (221)
T 3dr5_A 121 VMSRLANDSYQLVFGQVSP---MDLKALVDAAWPLLRRGGALVLADA 164 (221)
T ss_dssp HGGGSCTTCEEEEEECCCT---TTHHHHHHHHHHHEEEEEEEEETTT
T ss_pred HHHHhcCCCcCeEEEcCcH---HHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 42 2 3689999998654 3567789999999999999998544
No 120
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.63 E-value=4.1e-15 Score=125.13 Aligned_cols=111 Identities=16% Similarity=0.279 Sum_probs=95.2
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc-c
Q 018346 117 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-A 195 (357)
Q Consensus 117 ~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~ 195 (357)
....+++.+...++.+|||+|||+|.++..+++ ++.+|+|+|+|+.+++.+++++...++++++++.+|+.+ +.+ +
T Consensus 23 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~~~~ 99 (183)
T 2yxd_A 23 IRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-VLDKL 99 (183)
T ss_dssp HHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-HGGGC
T ss_pred HHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-cccCC
Confidence 344455666677889999999999999999997 588999999999999999999999888789999999887 333 6
Q ss_pred CccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 196 SYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 196 ~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
+||+|+++.+ .+...+++.+.++ |||.+++..+..
T Consensus 100 ~~D~i~~~~~----~~~~~~l~~~~~~--~gG~l~~~~~~~ 134 (183)
T 2yxd_A 100 EFNKAFIGGT----KNIEKIIEILDKK--KINHIVANTIVL 134 (183)
T ss_dssp CCSEEEECSC----SCHHHHHHHHHHT--TCCEEEEEESCH
T ss_pred CCcEEEECCc----ccHHHHHHHHhhC--CCCEEEEEeccc
Confidence 8999999988 5678889999888 999999987643
No 121
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.63 E-value=2.4e-15 Score=134.05 Aligned_cols=113 Identities=16% Similarity=0.219 Sum_probs=97.6
Q ss_pred HHHHHHcCCCCCCEEEEECCcccHHHHHHHHH-CCCcEEEEEcCCHHHHHHHHHHHHHcCCCC-eEEEEeccCCCccccC
Q 018346 119 ELYCERSRLEDGHTVLDVGCGWGSLSLYIAQK-YSNCKITGICNSKTQKEFIEEQCRVLELQN-VEIIVADISTFEMEAS 196 (357)
Q Consensus 119 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~~ 196 (357)
..++..+.+.++.+|||+|||+|.++..+++. .|+.+|+++|+|+.+++.|+++++..++++ ++++.+|+.+....++
T Consensus 83 ~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 162 (255)
T 3mb5_A 83 ALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEEEN 162 (255)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCCCS
T ss_pred HHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCCCC
Confidence 35666777888999999999999999999998 678999999999999999999999988864 9999999987533477
Q ss_pred ccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 197 YDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 197 fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
||+|+++. ++...+++++.++|+|||.+++..++.
T Consensus 163 ~D~v~~~~-----~~~~~~l~~~~~~L~~gG~l~~~~~~~ 197 (255)
T 3mb5_A 163 VDHVILDL-----PQPERVVEHAAKALKPGGFFVAYTPCS 197 (255)
T ss_dssp EEEEEECS-----SCGGGGHHHHHHHEEEEEEEEEEESSH
T ss_pred cCEEEECC-----CCHHHHHHHHHHHcCCCCEEEEEECCH
Confidence 99999954 355678999999999999999987654
No 122
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.63 E-value=1e-15 Score=132.36 Aligned_cols=107 Identities=13% Similarity=0.180 Sum_probs=92.3
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc-cCccEEEEcccc
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEMF 206 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~Ii~~~~~ 206 (357)
.++.+|||+|||+|.++..+++..+ .+|+|+|+|+.+++.++++... .++++++.+|+.+++.+ ++||+|+++.++
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~-~~v~~~D~s~~~~~~a~~~~~~--~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~ 117 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGF-PNVTSVDYSSVVVAAMQACYAH--VPQLRWETMDVRKLDFPSASFDVVLEKGTL 117 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTC-CCEEEEESCHHHHHHHHHHTTT--CTTCEEEECCTTSCCSCSSCEEEEEEESHH
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCC-CcEEEEeCCHHHHHHHHHhccc--CCCcEEEEcchhcCCCCCCcccEEEECcch
Confidence 5778999999999999999998843 3899999999999999988764 24899999999887654 789999999988
Q ss_pred cchh---------------hHHHHHHHHHHhcccCceEEEEeccCC
Q 018346 207 EHMK---------------NYQNLLKKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 207 ~~~~---------------~~~~~l~~~~~~LkpgG~l~~~~~~~~ 237 (357)
+++. +...+++++.++|||||.+++.+++.+
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~ 163 (215)
T 2pxx_A 118 DALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAP 163 (215)
T ss_dssp HHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCH
T ss_pred hhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCc
Confidence 6653 678899999999999999999888654
No 123
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.63 E-value=2.6e-15 Score=139.27 Aligned_cols=117 Identities=15% Similarity=0.129 Sum_probs=100.7
Q ss_pred HHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEEeccCCCccccC
Q 018346 118 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEMEAS 196 (357)
Q Consensus 118 l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~ 196 (357)
...+++..+..+ .+|||+|||+|..+..+++.+|+.+++++|+ +.+++.|++++...++ ++++++.+|+.+ +.+++
T Consensus 157 ~~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~ 233 (334)
T 2ip2_A 157 FHEIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVPSN 233 (334)
T ss_dssp HHHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCCSS
T ss_pred HHHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCCCC
Confidence 455666666666 8999999999999999999999999999999 9999999999877665 489999999987 44467
Q ss_pred ccEEEEcccccchhhHH--HHHHHHHHhcccCceEEEEeccCC
Q 018346 197 YDRIYSIEMFEHMKNYQ--NLLKKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 197 fD~Ii~~~~~~~~~~~~--~~l~~~~~~LkpgG~l~~~~~~~~ 237 (357)
||+|++..++|++++.. .+++++.+.|+|||++++..+..+
T Consensus 234 ~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 276 (334)
T 2ip2_A 234 GDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTIS 276 (334)
T ss_dssp CSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred CCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 99999999999886544 899999999999999999876543
No 124
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.63 E-value=1.4e-15 Score=134.60 Aligned_cols=106 Identities=16% Similarity=0.271 Sum_probs=92.0
Q ss_pred CCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc------cCccEE
Q 018346 127 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME------ASYDRI 200 (357)
Q Consensus 127 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~------~~fD~I 200 (357)
+.++.+|||+|||+|.++..+++..+ +|+|+|+|+.+++.++++.. ..+++++++|+.+.+.. ..||+|
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~~~d~v 128 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENT---AANISYRLLDGLVPEQAAQIHSEIGDANI 128 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSC---CTTEEEEECCTTCHHHHHHHHHHHCSCEE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCc---ccCceEEECcccccccccccccccCccEE
Confidence 45778999999999999999999854 89999999999999998762 23899999999885432 249999
Q ss_pred EEcccccchh--hHHHHHHHHHHhcccCceEEEEeccCC
Q 018346 201 YSIEMFEHMK--NYQNLLKKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 201 i~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~ 237 (357)
+++.++++++ +...+++++.++|||||++++..+...
T Consensus 129 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 167 (245)
T 3ggd_A 129 YMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTG 167 (245)
T ss_dssp EEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTT
T ss_pred EEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 9999999997 889999999999999999988877654
No 125
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.62 E-value=2.4e-15 Score=131.28 Aligned_cols=107 Identities=14% Similarity=0.163 Sum_probs=91.5
Q ss_pred CCCEEEEECCcccHHHHHHHHHCC-CcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCcc--c-----cCccE
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEM--E-----ASYDR 199 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~p-~~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~~--~-----~~fD~ 199 (357)
++.+|||||||+|..+..+++..+ +.+|+++|+|+.+++.|++++...++. +++++.+|+.+... . ++||+
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~ 137 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDM 137 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEE
Confidence 578999999999999999998764 789999999999999999999998885 69999999865311 1 57999
Q ss_pred EEEcccccchhhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 200 IYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 200 Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
|++....++......++..+ ++|||||++++.....
T Consensus 138 V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~~ 173 (221)
T 3u81_A 138 VFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVIV 173 (221)
T ss_dssp EEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCCC
T ss_pred EEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCCC
Confidence 99999888777667788888 9999999999876553
No 126
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.62 E-value=1.6e-15 Score=133.72 Aligned_cols=108 Identities=15% Similarity=0.322 Sum_probs=87.1
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHH------cCCCCeEEEEeccCC-Cc--c-ccCc
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRV------LELQNVEIIVADIST-FE--M-EASY 197 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~------~~~~~v~~~~~d~~~-~~--~-~~~f 197 (357)
.++.+|||||||+|.++..+++.+|+..|+|+|+|+.+++.|++++.. .+.+|+.++++|+.+ ++ + .++|
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 466799999999999999999999999999999999999999988764 355689999999987 43 3 3789
Q ss_pred cEEEEcccccchhh--------HHHHHHHHHHhcccCceEEEEecc
Q 018346 198 DRIYSIEMFEHMKN--------YQNLLKKISKWMKEDTLLFVHHFC 235 (357)
Q Consensus 198 D~Ii~~~~~~~~~~--------~~~~l~~~~~~LkpgG~l~~~~~~ 235 (357)
|.|+++.+-.+... ...+++++.++|||||.+++.+..
T Consensus 125 D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~ 170 (235)
T 3ckk_A 125 TKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDV 170 (235)
T ss_dssp EEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred eEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCC
Confidence 99998765433211 147999999999999999997653
No 127
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.62 E-value=1.5e-15 Score=137.09 Aligned_cols=112 Identities=21% Similarity=0.272 Sum_probs=93.7
Q ss_pred HHHHHcCCCCCCEEEEECCcccHHHHHHHHH-CCCcEEEEEcCCHHHHHHHHHHHHHc-CCCCeEEEEeccCCCccccCc
Q 018346 120 LYCERSRLEDGHTVLDVGCGWGSLSLYIAQK-YSNCKITGICNSKTQKEFIEEQCRVL-ELQNVEIIVADISTFEMEASY 197 (357)
Q Consensus 120 ~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~p~~~v~~vD~s~~~l~~a~~~~~~~-~~~~v~~~~~d~~~~~~~~~f 197 (357)
.++..+.+.++.+|||+|||+|.++..+++. .|+.+|+++|+|+.+++.|++++... |.++++++.+|+.+....++|
T Consensus 101 ~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~f 180 (275)
T 1yb2_A 101 YIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFISDQMY 180 (275)
T ss_dssp -----CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCCSCCE
T ss_pred HHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCcCCCc
Confidence 4566677788999999999999999999987 67889999999999999999999887 777899999999873323689
Q ss_pred cEEEEcccccchhhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 198 DRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 198 D~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
|+|+++ ++++..+++++.++|||||++++.+++.
T Consensus 181 D~Vi~~-----~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 214 (275)
T 1yb2_A 181 DAVIAD-----IPDPWNHVQKIASMMKPGSVATFYLPNF 214 (275)
T ss_dssp EEEEEC-----CSCGGGSHHHHHHTEEEEEEEEEEESSH
T ss_pred cEEEEc-----CcCHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 999993 4466789999999999999999987654
No 128
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.62 E-value=1.2e-15 Score=142.26 Aligned_cols=113 Identities=19% Similarity=0.207 Sum_probs=97.3
Q ss_pred HHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccccCccEE
Q 018346 121 YCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRI 200 (357)
Q Consensus 121 l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~I 200 (357)
+++.+...++.+|||+|||+|.++..+++..|..+|+++|+|+.+++.+++++...++ +++++.+|+.+.. .++||+|
T Consensus 188 ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~-~~~~~~~d~~~~~-~~~fD~I 265 (343)
T 2pjd_A 188 LLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGV-EGEVFASNVFSEV-KGRFDMI 265 (343)
T ss_dssp HHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTC-CCEEEECSTTTTC-CSCEEEE
T ss_pred HHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC-CCEEEEccccccc-cCCeeEE
Confidence 4455544556799999999999999999998878999999999999999999998887 5788999987754 4789999
Q ss_pred EEcccccc-----hhhHHHHHHHHHHhcccCceEEEEecc
Q 018346 201 YSIEMFEH-----MKNYQNLLKKISKWMKEDTLLFVHHFC 235 (357)
Q Consensus 201 i~~~~~~~-----~~~~~~~l~~~~~~LkpgG~l~~~~~~ 235 (357)
++++++++ ..+...+++++.++|||||.+++....
T Consensus 266 v~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 266 ISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp EECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred EECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 99999985 356788999999999999999997654
No 129
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.62 E-value=1.7e-15 Score=133.50 Aligned_cols=114 Identities=22% Similarity=0.255 Sum_probs=95.4
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCC-Ccccc
Q 018346 117 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADIST-FEMEA 195 (357)
Q Consensus 117 ~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~-~~~~~ 195 (357)
....+++.+...++.+|||+|||+|.++..+++..+ .+|+++|+|+.+++.|+++....+++++++..+|+.. ++...
T Consensus 79 ~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 157 (235)
T 1jg1_A 79 MVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKA 157 (235)
T ss_dssp HHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGC
T ss_pred HHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCCCC
Confidence 344555666777889999999999999999999875 8999999999999999999999888789999999733 22224
Q ss_pred CccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEeccCC
Q 018346 196 SYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 196 ~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 237 (357)
+||+|+++.+++++.+ .+.+.|+|||++++.++...
T Consensus 158 ~fD~Ii~~~~~~~~~~------~~~~~L~pgG~lvi~~~~~~ 193 (235)
T 1jg1_A 158 PYDVIIVTAGAPKIPE------PLIEQLKIGGKLIIPVGSYH 193 (235)
T ss_dssp CEEEEEECSBBSSCCH------HHHHTEEEEEEEEEEECSSS
T ss_pred CccEEEECCcHHHHHH------HHHHhcCCCcEEEEEEecCC
Confidence 5999999999988753 67889999999999887654
No 130
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.62 E-value=1.5e-15 Score=133.60 Aligned_cols=103 Identities=16% Similarity=0.247 Sum_probs=90.5
Q ss_pred CCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCcc---ccCccEEEEcc
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEM---EASYDRIYSIE 204 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~~---~~~fD~Ii~~~ 204 (357)
++.+|||+|||+|..+..+++..|+.+|+++|+|+.+++.|++++...+++ +++++.+|+.+... .++||+|++..
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~ 150 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDA 150 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEET
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcC
Confidence 678999999999999999998777899999999999999999999999885 89999999987543 37899999876
Q ss_pred cccchhhHHHHHHHHHHhcccCceEEEEec
Q 018346 205 MFEHMKNYQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 205 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
.. ..+..+++.+.++|||||++++...
T Consensus 151 ~~---~~~~~~l~~~~~~LkpgG~lv~d~~ 177 (232)
T 3ntv_A 151 AK---AQSKKFFEIYTPLLKHQGLVITDNV 177 (232)
T ss_dssp TS---SSHHHHHHHHGGGEEEEEEEEEECT
T ss_pred cH---HHHHHHHHHHHHhcCCCeEEEEeeC
Confidence 54 4567899999999999999988543
No 131
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.62 E-value=4.2e-16 Score=137.55 Aligned_cols=103 Identities=13% Similarity=0.045 Sum_probs=86.6
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCc--cc-cCccEEEEcc
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE--ME-ASYDRIYSIE 204 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~--~~-~~fD~Ii~~~ 204 (357)
.+|.+|||||||+|..+..+++.. ..+|++||+|+.+++.|+++....+. ++.++.+|+.+.. .+ ++||.|+...
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~-~~~v~~id~~~~~~~~a~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~FD~i~~D~ 136 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAP-IDEHWIIECNDGVFQRLRDWAPRQTH-KVIPLKGLWEDVAPTLPDGHFDGILYDT 136 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSC-EEEEEEEECCHHHHHHHHHHGGGCSS-EEEEEESCHHHHGGGSCTTCEEEEEECC
T ss_pred cCCCeEEEECCCccHHHHHHHHhC-CcEEEEEeCCHHHHHHHHHHHhhCCC-ceEEEeehHHhhcccccccCCceEEEee
Confidence 468899999999999999998765 36899999999999999999887776 7899999876542 22 6799997643
Q ss_pred -----cccchhhHHHHHHHHHHhcccCceEEEE
Q 018346 205 -----MFEHMKNYQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 205 -----~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 232 (357)
..++..+...+++++.++|||||++++.
T Consensus 137 ~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 137 YPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp CCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred eecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 4566788999999999999999998763
No 132
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.62 E-value=2.7e-15 Score=149.77 Aligned_cols=118 Identities=23% Similarity=0.236 Sum_probs=98.0
Q ss_pred HHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHC-CCcEEEEEcCCHHHHHHHHHHHHHc------CCCCeEEEEeccCC
Q 018346 118 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVL------ELQNVEIIVADIST 190 (357)
Q Consensus 118 l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~~vD~s~~~l~~a~~~~~~~------~~~~v~~~~~d~~~ 190 (357)
++.+++.+...++.+|||||||+|.++..+++.. |..+|+|+|+|+.+++.|++++... +.++++|+++|+.+
T Consensus 710 le~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~d 789 (950)
T 3htx_A 710 VEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILE 789 (950)
T ss_dssp HHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTS
T ss_pred HHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHh
Confidence 3334444444478899999999999999999886 4479999999999999999876542 45689999999999
Q ss_pred Cccc-cCccEEEEcccccchhhHH--HHHHHHHHhcccCceEEEEeccC
Q 018346 191 FEME-ASYDRIYSIEMFEHMKNYQ--NLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 191 ~~~~-~~fD~Ii~~~~~~~~~~~~--~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
++.. ++||+|++..+++|+++.. .+++++.++|||| .+++.+++.
T Consensus 790 Lp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 790 FDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp CCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBG
T ss_pred CCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCc
Confidence 8765 7899999999999997644 5899999999999 888887765
No 133
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.62 E-value=2e-15 Score=132.57 Aligned_cols=107 Identities=14% Similarity=0.156 Sum_probs=87.5
Q ss_pred HHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCC----CccccCc
Q 018346 122 CERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADIST----FEMEASY 197 (357)
Q Consensus 122 ~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~----~~~~~~f 197 (357)
++.+.+.++.+|||+|||+|.++..+++..|..+|+|+|+|+.+++.+++++... +++.++.+|+.+ .+..++|
T Consensus 67 l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~ 144 (230)
T 1fbn_A 67 LKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER--ENIIPILGDANKPQEYANIVEKV 144 (230)
T ss_dssp CCCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC--TTEEEEECCTTCGGGGTTTSCCE
T ss_pred ccccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC--CCeEEEECCCCCcccccccCccE
Confidence 4445567889999999999999999999876689999999999999999987655 589999999987 4444689
Q ss_pred cEEEEcccccchhhHHHHHHHHHHhcccCceEEEE
Q 018346 198 DRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 198 D~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 232 (357)
|+|+.... .......+++++.++|||||.+++.
T Consensus 145 D~v~~~~~--~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 145 DVIYEDVA--QPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp EEEEECCC--STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEecC--ChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 99994321 1122377899999999999999997
No 134
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.61 E-value=1.6e-15 Score=136.12 Aligned_cols=107 Identities=17% Similarity=0.153 Sum_probs=85.8
Q ss_pred CCCCCCEEEEECCcccHHHHHHHHHCCCc-EEEEEcCCHHHHHHHHHHHHHcCC--------------------------
Q 018346 126 RLEDGHTVLDVGCGWGSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLEL-------------------------- 178 (357)
Q Consensus 126 ~~~~~~~vLDiGcG~G~~~~~la~~~p~~-~v~~vD~s~~~l~~a~~~~~~~~~-------------------------- 178 (357)
+..++.+|||||||+|..+..++.. ++ +|+|+|+|+.+++.|+++++....
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~--~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~ 129 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACD--SFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEE 129 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGG--TEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHh--hhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHH
Confidence 3457789999999999888776655 44 799999999999999987654310
Q ss_pred ---CCeE-EEEeccCCC-cc----ccCccEEEEcccccch----hhHHHHHHHHHHhcccCceEEEEec
Q 018346 179 ---QNVE-IIVADISTF-EM----EASYDRIYSIEMFEHM----KNYQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 179 ---~~v~-~~~~d~~~~-~~----~~~fD~Ii~~~~~~~~----~~~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
.++. ++++|+.+. +. .++||+|+++.+++++ +++..+++++.++|||||.+++...
T Consensus 130 ~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~ 198 (263)
T 2a14_A 130 KLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVT 198 (263)
T ss_dssp HHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred HHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 0244 899999873 21 2689999999999986 5678899999999999999999864
No 135
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.61 E-value=6e-15 Score=138.27 Aligned_cols=115 Identities=15% Similarity=0.153 Sum_probs=100.4
Q ss_pred HHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCccccCc
Q 018346 119 ELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEMEASY 197 (357)
Q Consensus 119 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~f 197 (357)
..+++.++..++.+|||+|||+|.++..+++.+|+.+++++|+ +.+++.|++++...++. +++++.+|+.+ +.+..|
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~ 250 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLPRKA 250 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSSCE
T ss_pred HHHHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCCCCc
Confidence 3455666777889999999999999999999999899999999 99999999999888875 89999999976 233459
Q ss_pred cEEEEcccccchhhH--HHHHHHHHHhcccCceEEEEecc
Q 018346 198 DRIYSIEMFEHMKNY--QNLLKKISKWMKEDTLLFVHHFC 235 (357)
Q Consensus 198 D~Ii~~~~~~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~ 235 (357)
|+|++..+++++++. ..+++++.++|+|||++++..+.
T Consensus 251 D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 251 DAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 999999999998655 58999999999999999998765
No 136
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.61 E-value=2.5e-15 Score=129.45 Aligned_cols=105 Identities=16% Similarity=0.178 Sum_probs=91.1
Q ss_pred CCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccccCccEEEEcccc
Q 018346 127 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMF 206 (357)
Q Consensus 127 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~Ii~~~~~ 206 (357)
+.++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.|++++...+.+++++..+|+.+.. +++||+|+++.++
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~fD~i~~~~~~ 135 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKL-GAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADV-DGKFDLIVANILA 135 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTC-CSCEEEEEEESCH
T ss_pred ccCCCEEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccC-CCCceEEEECCcH
Confidence 346789999999999999998875 45699999999999999999999988866999999998754 4789999999888
Q ss_pred cchhhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 207 EHMKNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 207 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
++ ...+++++.++|+|||.+++..+..
T Consensus 136 ~~---~~~~l~~~~~~L~~gG~l~~~~~~~ 162 (205)
T 3grz_A 136 EI---LLDLIPQLDSHLNEDGQVIFSGIDY 162 (205)
T ss_dssp HH---HHHHGGGSGGGEEEEEEEEEEEEEG
T ss_pred HH---HHHHHHHHHHhcCCCCEEEEEecCc
Confidence 65 4788999999999999999976543
No 137
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.60 E-value=3.8e-15 Score=134.21 Aligned_cols=106 Identities=20% Similarity=0.270 Sum_probs=94.0
Q ss_pred CCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccccCccEEEEcccc
Q 018346 127 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMF 206 (357)
Q Consensus 127 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~Ii~~~~~ 206 (357)
+.++.+|||+|||+|.++..+++..+..+|+|+|+|+.+++.|++|++.++++++.++++|+.+.+..++||+|+++++.
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~~~~~D~Vi~d~p~ 196 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVELKDVADRVIMGYVH 196 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCCTTCEEEEEECCCS
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCccCCceEEEECCcc
Confidence 56788999999999999999999876779999999999999999999999988899999999887323689999999886
Q ss_pred cchhhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 207 EHMKNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 207 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
+...++..+.+.|+|||++++.+...
T Consensus 197 ----~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 197 ----KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp ----SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred ----cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 45668889999999999999987755
No 138
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.60 E-value=6.8e-16 Score=137.61 Aligned_cols=117 Identities=11% Similarity=0.054 Sum_probs=86.5
Q ss_pred HHHHHHHHHcCC--CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCC-
Q 018346 116 AMLELYCERSRL--EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTF- 191 (357)
Q Consensus 116 ~~l~~l~~~~~~--~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~- 191 (357)
.++..++..+.. .++.+|||+|||+|.++..++...|+.+|+|+|+|+.+++.|++++...+++ +++++++|+.+.
T Consensus 50 ~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 129 (254)
T 2h00_A 50 HWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLL 129 (254)
T ss_dssp HHHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSS
T ss_pred HHHHHHHhhccccCCCCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhh
Confidence 344445443332 2567999999999999999998877789999999999999999999998885 599999997652
Q ss_pred --ccc----cCccEEEEcccccchh-h--------------HHHHHHHHHHhcccCceEEEE
Q 018346 192 --EME----ASYDRIYSIEMFEHMK-N--------------YQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 192 --~~~----~~fD~Ii~~~~~~~~~-~--------------~~~~l~~~~~~LkpgG~l~~~ 232 (357)
+.+ ++||+|++++++++.. + ...++..+.++|||||.+.+.
T Consensus 130 ~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~ 191 (254)
T 2h00_A 130 MDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFV 191 (254)
T ss_dssp TTTSTTCCSCCBSEEEECCCCC-------------------------CTTTTHHHHTHHHHH
T ss_pred hhhhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEE
Confidence 222 4799999999887543 1 124567788899999987664
No 139
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.60 E-value=4.7e-16 Score=148.69 Aligned_cols=122 Identities=11% Similarity=0.146 Sum_probs=98.9
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCe--EEEEe
Q 018346 109 TLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNV--EIIVA 186 (357)
Q Consensus 109 ~l~~~~~~~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v--~~~~~ 186 (357)
.+........+.+++.+.+.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++ +.+.. .+...
T Consensus 87 ~~~~~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~--g~~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~ 160 (416)
T 4e2x_A 87 VMREHFAMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEA--GVRHLGFEPSSGVAAKAREK----GIRVRTDFFEKA 160 (416)
T ss_dssp HHHHHHHHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHT--TCEEEEECCCHHHHHHHHTT----TCCEECSCCSHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHc--CCcEEEECCCHHHHHHHHHc----CCCcceeeechh
Confidence 455666677788888888888899999999999999999987 67999999999999988775 33211 12223
Q ss_pred ccCCCccc-cCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 187 DISTFEME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 187 d~~~~~~~-~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
+...++++ ++||+|+++.+++|++++..+++++.++|||||++++..++.
T Consensus 161 ~~~~l~~~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 211 (416)
T 4e2x_A 161 TADDVRRTEGPANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDPYL 211 (416)
T ss_dssp HHHHHHHHHCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred hHhhcccCCCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 33333333 789999999999999999999999999999999999987754
No 140
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.60 E-value=7.2e-15 Score=124.82 Aligned_cols=103 Identities=17% Similarity=0.335 Sum_probs=89.4
Q ss_pred CCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc-cCccEEEEc-c
Q 018346 127 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSI-E 204 (357)
Q Consensus 127 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~Ii~~-~ 204 (357)
+.++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.++++. +++.++.+|+.+.+.+ ++||+|+++ .
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~-----~~~~~~~~d~~~~~~~~~~~D~i~~~~~ 116 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ--GHDVLGTDLDPILIDYAKQDF-----PEARWVVGDLSVDQISETDFDLIVSAGN 116 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTTSCCCCCCEEEEEECCC
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC--CCcEEEEcCCHHHHHHHHHhC-----CCCcEEEcccccCCCCCCceeEEEECCc
Confidence 357889999999999999999987 679999999999999998865 2689999999886654 789999998 6
Q ss_pred cccch--hhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 205 MFEHM--KNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 205 ~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
+++++ ++...+++.+.++|+|||.+++..+..
T Consensus 117 ~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~ 150 (195)
T 3cgg_A 117 VMGFLAEDGREPALANIHRALGADGRAVIGFGAG 150 (195)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred HHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 78777 566889999999999999999977654
No 141
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.60 E-value=7.5e-15 Score=128.11 Aligned_cols=104 Identities=13% Similarity=0.178 Sum_probs=89.6
Q ss_pred CCCEEEEECCcccHHHHHHHHHCC-CcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCccc------cCccEE
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEME------ASYDRI 200 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~p-~~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~~~------~~fD~I 200 (357)
++.+|||||||+|..+..+++.+| +.+|+++|+|+.+++.|++++...+++ +++++.+|+.+.... ++||+|
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v 137 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFI 137 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEE
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEE
Confidence 678999999999999999999887 789999999999999999999998885 699999998764221 469999
Q ss_pred EEcccccchhhHHHHHHHHHHhcccCceEEEEecc
Q 018346 201 YSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFC 235 (357)
Q Consensus 201 i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 235 (357)
++..+. +....+++.+.++|+|||++++..+.
T Consensus 138 ~~d~~~---~~~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 138 FIDADK---QNNPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp EECSCG---GGHHHHHHHHHHTCCTTCEEEEESCS
T ss_pred EEcCCc---HHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 998764 35678999999999999998886543
No 142
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.60 E-value=6.7e-15 Score=131.19 Aligned_cols=113 Identities=21% Similarity=0.250 Sum_probs=97.3
Q ss_pred HHHHHHcCCCCCCEEEEECCcccHHHHHHHHH-CCCcEEEEEcCCHHHHHHHHHHHHHc-CCCCeEEEEeccCCCccc-c
Q 018346 119 ELYCERSRLEDGHTVLDVGCGWGSLSLYIAQK-YSNCKITGICNSKTQKEFIEEQCRVL-ELQNVEIIVADISTFEME-A 195 (357)
Q Consensus 119 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~p~~~v~~vD~s~~~l~~a~~~~~~~-~~~~v~~~~~d~~~~~~~-~ 195 (357)
..++..+.+.++.+|||+|||+|.++..+++. .|+.+|+++|+|+.+++.|++++... +.+++++..+|+.+.+.+ +
T Consensus 86 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~ 165 (258)
T 2pwy_A 86 SAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEA 165 (258)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTT
T ss_pred HHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCC
Confidence 34666677888999999999999999999998 57789999999999999999999887 766899999999886444 6
Q ss_pred CccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 196 SYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 196 ~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
+||+|+++. ++...+++++.++|+|||.+++..++.
T Consensus 166 ~~D~v~~~~-----~~~~~~l~~~~~~L~~gG~l~~~~~~~ 201 (258)
T 2pwy_A 166 AYDGVALDL-----MEPWKVLEKAALALKPDRFLVAYLPNI 201 (258)
T ss_dssp CEEEEEEES-----SCGGGGHHHHHHHEEEEEEEEEEESCH
T ss_pred CcCEEEECC-----cCHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 899999853 455688999999999999999987654
No 143
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.60 E-value=6.3e-15 Score=124.87 Aligned_cols=113 Identities=19% Similarity=0.177 Sum_probs=95.8
Q ss_pred HHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEEeccCCCccc-cC
Q 018346 119 ELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEME-AS 196 (357)
Q Consensus 119 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~~-~~ 196 (357)
..+++.+...++.+|||+|||+|..+..+++.. .+|+++|+|+.+++.+++++...+. +++.+..+|+.+.... ++
T Consensus 23 ~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 100 (192)
T 1l3i_A 23 CLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPD 100 (192)
T ss_dssp HHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCC
T ss_pred HHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccCCC
Confidence 345555677788999999999999999999874 7999999999999999999998887 6899999998762122 58
Q ss_pred ccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 197 YDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 197 fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
||+|+++.++++ ...+++.+.++|+|||.+++..+..
T Consensus 101 ~D~v~~~~~~~~---~~~~l~~~~~~l~~gG~l~~~~~~~ 137 (192)
T 1l3i_A 101 IDIAVVGGSGGE---LQEILRIIKDKLKPGGRIIVTAILL 137 (192)
T ss_dssp EEEEEESCCTTC---HHHHHHHHHHTEEEEEEEEEEECBH
T ss_pred CCEEEECCchHH---HHHHHHHHHHhcCCCcEEEEEecCc
Confidence 999999988764 4789999999999999999977643
No 144
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.60 E-value=2.7e-15 Score=135.61 Aligned_cols=104 Identities=21% Similarity=0.221 Sum_probs=91.1
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCccccCccEEEEcccc
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEMEASYDRIYSIEMF 206 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~fD~Ii~~~~~ 206 (357)
.++.+|||+|||+|.++..+++..+. +|+|+|+|+.+++.|++++..++++ +++++++|+.+....++||+|+++++.
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~~~p~ 202 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYVV 202 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCCS
T ss_pred CCCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEECCch
Confidence 46889999999999999999998533 7999999999999999999999886 599999999987656789999998774
Q ss_pred cchhhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 207 EHMKNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 207 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
. ...+++.+.++|||||++++.+..+
T Consensus 203 ~----~~~~l~~~~~~LkpgG~l~~~~~~~ 228 (278)
T 2frn_A 203 R----THEFIPKALSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp S----GGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred h----HHHHHHHHHHHCCCCeEEEEEEeec
Confidence 3 3567888999999999999987764
No 145
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.60 E-value=4.1e-15 Score=138.81 Aligned_cols=115 Identities=22% Similarity=0.227 Sum_probs=96.5
Q ss_pred HHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEEeccCCCccccCc
Q 018346 119 ELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEMEASY 197 (357)
Q Consensus 119 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~f 197 (357)
..+++.+...++.+|||||||+|.++..+++. +..+|+|+|+|+ +++.|+++++.+++ ++++++.+|+.+++.+++|
T Consensus 40 ~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~~ 117 (348)
T 2y1w_A 40 RAILQNHTDFKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQV 117 (348)
T ss_dssp HHHHHTGGGTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCE
T ss_pred HHHHhccccCCcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCCCce
Confidence 34555555567899999999999999999986 356999999996 88999999998887 5899999999987655789
Q ss_pred cEEEEcccccch--hhHHHHHHHHHHhcccCceEEEEecc
Q 018346 198 DRIYSIEMFEHM--KNYQNLLKKISKWMKEDTLLFVHHFC 235 (357)
Q Consensus 198 D~Ii~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~ 235 (357)
|+|++..+++++ +.....+..+.++|||||.+++...+
T Consensus 118 D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (348)
T 2y1w_A 118 DIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTIGD 157 (348)
T ss_dssp EEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCEEE
T ss_pred eEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEecCc
Confidence 999999988776 45677888899999999999876544
No 146
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.60 E-value=3.7e-15 Score=134.50 Aligned_cols=112 Identities=20% Similarity=0.179 Sum_probs=95.7
Q ss_pred cCCCCCCEEEEECCcccHHHHHHHHHCCC-cEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-----ccCcc
Q 018346 125 SRLEDGHTVLDVGCGWGSLSLYIAQKYSN-CKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----EASYD 198 (357)
Q Consensus 125 ~~~~~~~~vLDiGcG~G~~~~~la~~~p~-~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~~~fD 198 (357)
+...++.+|||+|||+|..+..+++..++ .+|+++|+|+.+++.+++++...|+++++++.+|+.+++. .++||
T Consensus 79 l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD 158 (274)
T 3ajd_A 79 LNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFD 158 (274)
T ss_dssp HCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEE
T ss_pred hCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCC
Confidence 45678899999999999999999998766 7999999999999999999999998899999999887543 36899
Q ss_pred EEEEcccccch------------------hhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 199 RIYSIEMFEHM------------------KNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 199 ~Ii~~~~~~~~------------------~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
+|+++++.... .....+++.+.++|||||.+++++.+.
T Consensus 159 ~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 159 KILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp EEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred EEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 99999765432 345789999999999999999987654
No 147
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.60 E-value=5.6e-15 Score=136.70 Aligned_cols=108 Identities=19% Similarity=0.128 Sum_probs=91.6
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCC--CeEEEEeccCCCcc-----ccCccEE
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ--NVEIIVADISTFEM-----EASYDRI 200 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~--~v~~~~~d~~~~~~-----~~~fD~I 200 (357)
.++.+|||+|||+|.+++.+++. +++|+++|+|+.+++.|++|+..++++ +++++++|+.+... .++||+|
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~--ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~I 229 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAA--GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDII 229 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEE
T ss_pred CCCCcEEEcccccCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEE
Confidence 46789999999999999999986 569999999999999999999999885 49999999987532 2579999
Q ss_pred EEccccc----------chhhHHHHHHHHHHhcccCceEEEEeccCC
Q 018346 201 YSIEMFE----------HMKNYQNLLKKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 201 i~~~~~~----------~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 237 (357)
+++++.. ...++..+++.+.++|+|||.+++...+..
T Consensus 230 i~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~ 276 (332)
T 2igt_A 230 LTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSI 276 (332)
T ss_dssp EECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCT
T ss_pred EECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCC
Confidence 9988742 235678899999999999999888776544
No 148
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.59 E-value=1.2e-14 Score=129.29 Aligned_cols=105 Identities=11% Similarity=0.187 Sum_probs=90.5
Q ss_pred CCCEEEEECCcccHHHHHHHHHCC-CcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCcc----ccCccEEEE
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEM----EASYDRIYS 202 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~p-~~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~~----~~~fD~Ii~ 202 (357)
++.+|||||||+|..+..+++.+| +.+|+++|+|+.+++.|++++...+++ +|+++.+|+.+... .++||+|++
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~ 142 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFI 142 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEE
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEE
Confidence 678999999999999999999887 789999999999999999999998885 89999999876321 148999999
Q ss_pred cccccchhhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 203 IEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 203 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
... ..+...+++.+.++|||||++++.....
T Consensus 143 d~~---~~~~~~~l~~~~~~LkpGG~lv~~~~~~ 173 (248)
T 3tfw_A 143 DAD---KPNNPHYLRWALRYSRPGTLIIGDNVVR 173 (248)
T ss_dssp CSC---GGGHHHHHHHHHHTCCTTCEEEEECCSG
T ss_pred CCc---hHHHHHHHHHHHHhcCCCeEEEEeCCCc
Confidence 764 3466789999999999999999865543
No 149
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.59 E-value=7.1e-15 Score=128.63 Aligned_cols=104 Identities=23% Similarity=0.285 Sum_probs=90.0
Q ss_pred CCCCCCEEEEECCcccHHHHHHHHHC-----CCcEEEEEcCCHHHHHHHHHHHHHcC-----CCCeEEEEeccCCCc---
Q 018346 126 RLEDGHTVLDVGCGWGSLSLYIAQKY-----SNCKITGICNSKTQKEFIEEQCRVLE-----LQNVEIIVADISTFE--- 192 (357)
Q Consensus 126 ~~~~~~~vLDiGcG~G~~~~~la~~~-----p~~~v~~vD~s~~~l~~a~~~~~~~~-----~~~v~~~~~d~~~~~--- 192 (357)
.+.++.+|||+|||+|..+..+++.. |..+|+++|+|+.+++.|+++....+ .++++++.+|+.+..
T Consensus 77 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 156 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEE 156 (227)
T ss_dssp TSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHH
T ss_pred hCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhccccc
Confidence 35678999999999999999999885 45799999999999999999998887 468999999998753
Q ss_pred -cc-cCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEecc
Q 018346 193 -ME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFC 235 (357)
Q Consensus 193 -~~-~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 235 (357)
.. ++||+|++..+++++ ++.+.+.|||||++++..+.
T Consensus 157 ~~~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 157 KKELGLFDAIHVGASASEL------PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp HHHHCCEEEEEECSBBSSC------CHHHHHHEEEEEEEEEEEEE
T ss_pred CccCCCcCEEEECCchHHH------HHHHHHhcCCCcEEEEEEcc
Confidence 33 789999999998765 47788999999999998775
No 150
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.59 E-value=1.1e-14 Score=135.28 Aligned_cols=109 Identities=22% Similarity=0.328 Sum_probs=92.5
Q ss_pred HHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEEeccCCCccc-cCc
Q 018346 120 LYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEME-ASY 197 (357)
Q Consensus 120 ~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~~-~~f 197 (357)
.+.+.....++.+|||||||+|.++..+++. +..+|+|+|+|+ +++.|+++++.+++ ++++++.+|+.+++.+ ++|
T Consensus 55 ~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 132 (340)
T 2fyt_A 55 FIYQNPHIFKDKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKV 132 (340)
T ss_dssp HHHHCGGGTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCE
T ss_pred HHHhhhhhcCCCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcE
Confidence 3444444567889999999999999999987 245999999997 99999999999887 5899999999987665 789
Q ss_pred cEEEEccc---ccchhhHHHHHHHHHHhcccCceEE
Q 018346 198 DRIYSIEM---FEHMKNYQNLLKKISKWMKEDTLLF 230 (357)
Q Consensus 198 D~Ii~~~~---~~~~~~~~~~l~~~~~~LkpgG~l~ 230 (357)
|+|+++.+ +.+......++..+.++|||||.++
T Consensus 133 D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 133 DVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp EEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred EEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 99999873 4455678889999999999999987
No 151
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.59 E-value=7.3e-15 Score=138.47 Aligned_cols=113 Identities=21% Similarity=0.331 Sum_probs=94.9
Q ss_pred HHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCccccCcc
Q 018346 120 LYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEMEASYD 198 (357)
Q Consensus 120 ~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~fD 198 (357)
.+.......++.+|||+|||+|.++..+++.. ..+|+|+|+| .+++.|++++..+++. +++++++|+.+++.+++||
T Consensus 54 ~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g-~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D 131 (376)
T 3r0q_C 54 AVFQNKHHFEGKTVLDVGTGSGILAIWSAQAG-ARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLPEKVD 131 (376)
T ss_dssp HHHTTTTTTTTCEEEEESCTTTHHHHHHHHTT-CSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCSSCEE
T ss_pred HHHhccccCCCCEEEEeccCcCHHHHHHHhcC-CCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcCCcce
Confidence 34444556678999999999999999999873 3499999999 9999999999998884 6999999999876668899
Q ss_pred EEEEcccccch---hhHHHHHHHHHHhcccCceEEEEec
Q 018346 199 RIYSIEMFEHM---KNYQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 199 ~Ii~~~~~~~~---~~~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
+|+++.+.+.+ .....+++.+.++|||||.+++...
T Consensus 132 ~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~ 170 (376)
T 3r0q_C 132 VIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHA 170 (376)
T ss_dssp EEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEE
T ss_pred EEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecC
Confidence 99997755554 4578899999999999999977544
No 152
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.59 E-value=8.3e-15 Score=131.04 Aligned_cols=100 Identities=19% Similarity=0.297 Sum_probs=87.3
Q ss_pred CCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc-cCccEEEEccccc
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEMFE 207 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~Ii~~~~~~ 207 (357)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++.. .+ ++.+|+.+++.+ ++||+|++..++.
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~----~~--~~~~d~~~~~~~~~~fD~v~~~~~~~ 125 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER--GFEVVLVDPSKEMLEVAREKGV----KN--VVEAKAEDLPFPSGAFEAVLALGDVL 125 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHHTC----SC--EEECCTTSCCSCTTCEEEEEECSSHH
T ss_pred CCCeEEEeCCCcCHHHHHHHHc--CCeEEEEeCCHHHHHHHHhhcC----CC--EEECcHHHCCCCCCCEEEEEEcchhh
Confidence 6789999999999999999987 6799999999999999988753 12 789999887654 7899999988776
Q ss_pred ch-hhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 208 HM-KNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 208 ~~-~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
++ ++...+++++.++|||||.+++.+++.
T Consensus 126 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 126 SYVENKDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp HHCSCHHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred hccccHHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 66 779999999999999999999988764
No 153
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.59 E-value=5e-15 Score=129.31 Aligned_cols=108 Identities=12% Similarity=0.136 Sum_probs=90.1
Q ss_pred HHcCCCCCCEEEEECCcccHHHHHHHHHC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCc---c-ccCc
Q 018346 123 ERSRLEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE---M-EASY 197 (357)
Q Consensus 123 ~~~~~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~---~-~~~f 197 (357)
+.+.+++|.+|||+|||+|..+..+++.. |..+|+|+|+|+.+++.+++++... +|+..+.+|..... . .+++
T Consensus 71 ~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~--~ni~~V~~d~~~p~~~~~~~~~v 148 (233)
T 4df3_A 71 IELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR--RNIFPILGDARFPEKYRHLVEGV 148 (233)
T ss_dssp SCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC--TTEEEEESCTTCGGGGTTTCCCE
T ss_pred hhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh--cCeeEEEEeccCccccccccceE
Confidence 34678899999999999999999999874 7889999999999999998887654 38999999987632 1 2679
Q ss_pred cEEEEcccccchhhHHHHHHHHHHhcccCceEEEEec
Q 018346 198 DRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 198 D~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
|+|++..+ +..+...++.++.+.|||||.+++...
T Consensus 149 DvVf~d~~--~~~~~~~~l~~~~r~LKpGG~lvI~ik 183 (233)
T 4df3_A 149 DGLYADVA--QPEQAAIVVRNARFFLRDGGYMLMAIK 183 (233)
T ss_dssp EEEEECCC--CTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEEecc--CChhHHHHHHHHHHhccCCCEEEEEEe
Confidence 99987644 445678899999999999999998653
No 154
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.59 E-value=8.8e-15 Score=127.80 Aligned_cols=104 Identities=14% Similarity=0.132 Sum_probs=89.6
Q ss_pred CCCEEEEECCcccHHHHHHHHHCC-CcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCcc--c-----cCccE
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEM--E-----ASYDR 199 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~p-~~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~~--~-----~~fD~ 199 (357)
++.+|||+|||+|..+..+++.+| +.+|+++|+|+.+++.|++++...++. +++++++|+.+... . ++||+
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDL 143 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccE
Confidence 577999999999999999999886 789999999999999999999998885 69999999866421 1 57999
Q ss_pred EEEcccccchhhHHHHHHHHHHhcccCceEEEEecc
Q 018346 200 IYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFC 235 (357)
Q Consensus 200 Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 235 (357)
|++.... .++..+++.+.++|||||++++....
T Consensus 144 v~~~~~~---~~~~~~l~~~~~~L~pgG~lv~~~~~ 176 (225)
T 3tr6_A 144 IYIDADK---ANTDLYYEESLKLLREGGLIAVDNVL 176 (225)
T ss_dssp EEECSCG---GGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred EEECCCH---HHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 9987653 45778999999999999999986553
No 155
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.58 E-value=9.4e-15 Score=130.02 Aligned_cols=152 Identities=11% Similarity=0.084 Sum_probs=109.7
Q ss_pred hHHHHHhhcCCCCcccc---------ccCCCCCCHHHHHHHHHHHHHHHcCC-CCCCEEEEECCcc--cHHHHHHH-HHC
Q 018346 85 TSFFKLVLGKYFKYSCC---------YFSDASKTLEDAEKAMLELYCERSRL-EDGHTVLDVGCGW--GSLSLYIA-QKY 151 (357)
Q Consensus 85 ~~~~~~~l~~~~~y~~~---------~f~~~~~~l~~~~~~~l~~l~~~~~~-~~~~~vLDiGcG~--G~~~~~la-~~~ 151 (357)
.++|..+|+-.-+|... .+ +....+....+..+...++.+.. ....+|||||||. +..+..++ +..
T Consensus 25 aR~yd~~LgGk~n~~~Dr~~~~~~~~~~-P~~~~~a~~nr~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~ 103 (277)
T 3giw_A 25 ARIYDYIIGGKDYYPADKEAGDAMSREW-PALPVHMRANRDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVA 103 (277)
T ss_dssp HHHHHHHTTCSCCCHHHHHHHHHHHHHC-TTHHHHHHHHHHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHC
T ss_pred chhheeecCCccCCHHHHHHHHHHHHhC-CCHHHHHHHHHHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHC
Confidence 45677777766555321 11 22223344455666666666542 2446899999997 33444444 456
Q ss_pred CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-------ccCcc-----EEEEcccccchhh---HHHHH
Q 018346 152 SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-------EASYD-----RIYSIEMFEHMKN---YQNLL 216 (357)
Q Consensus 152 p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-------~~~fD-----~Ii~~~~~~~~~~---~~~~l 216 (357)
|+++|+++|.|+.|++.|++++...+..+++|+++|+.+... ...|| .|+++.++||+++ +..++
T Consensus 104 P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l 183 (277)
T 3giw_A 104 PESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIV 183 (277)
T ss_dssp TTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHH
T ss_pred CCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHH
Confidence 899999999999999999998765433479999999987521 14466 6899999999966 57899
Q ss_pred HHHHHhcccCceEEEEeccCC
Q 018346 217 KKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 217 ~~~~~~LkpgG~l~~~~~~~~ 237 (357)
+++.+.|+|||+|++...+..
T Consensus 184 ~~l~~~L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 184 RRLLEPLPSGSYLAMSIGTAE 204 (277)
T ss_dssp HHHHTTSCTTCEEEEEEECCT
T ss_pred HHHHHhCCCCcEEEEEeccCC
Confidence 999999999999999988765
No 156
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.58 E-value=8.1e-15 Score=128.87 Aligned_cols=104 Identities=16% Similarity=0.303 Sum_probs=91.5
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCC-cc---ccCccEEEE
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTF-EM---EASYDRIYS 202 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~-~~---~~~fD~Ii~ 202 (357)
.++.+|||+|||+|..+..+++..|+.+|+++|+|+.+++.|++++...++. +++++.+|+.+. +. .++||+|++
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 132 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFI 132 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEE
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEE
Confidence 3678999999999999999999988899999999999999999999988874 799999999874 21 367999999
Q ss_pred cccccchhhHHHHHHHHHHhcccCceEEEEec
Q 018346 203 IEMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 203 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
+.+.+ ++..+++.+.++|+|||++++...
T Consensus 133 ~~~~~---~~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 133 DAAKG---QYRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp EGGGS---CHHHHHHHHGGGEEEEEEEEEETT
T ss_pred CCCHH---HHHHHHHHHHHHcCCCeEEEEEcC
Confidence 88764 668899999999999999999754
No 157
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.58 E-value=8.5e-15 Score=128.79 Aligned_cols=108 Identities=11% Similarity=0.118 Sum_probs=88.8
Q ss_pred HHcCCCCCCEEEEECCcccHHHHHHHHHC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCC---cc-ccCc
Q 018346 123 ERSRLEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF---EM-EASY 197 (357)
Q Consensus 123 ~~~~~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~---~~-~~~f 197 (357)
+.+.+.++.+|||+|||+|.++..+++.. |+.+|+|+|+|+.+++.+.++++.. ++++++.+|+.+. +. .++|
T Consensus 71 ~~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~--~~v~~~~~d~~~~~~~~~~~~~~ 148 (233)
T 2ipx_A 71 DQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR--TNIIPVIEDARHPHKYRMLIAMV 148 (233)
T ss_dssp SCCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC--TTEEEECSCTTCGGGGGGGCCCE
T ss_pred heecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc--CCeEEEEcccCChhhhcccCCcE
Confidence 34556788999999999999999999885 6689999999999988888887765 4899999999873 22 2689
Q ss_pred cEEEEcccccchhhHHHHHHHHHHhcccCceEEEEec
Q 018346 198 DRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 198 D~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
|+|+++.+ .......++.++.++|||||.+++...
T Consensus 149 D~V~~~~~--~~~~~~~~~~~~~~~LkpgG~l~i~~~ 183 (233)
T 2ipx_A 149 DVIFADVA--QPDQTRIVALNAHTFLRNGGHFVISIK 183 (233)
T ss_dssp EEEEECCC--CTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEEcCC--CccHHHHHHHHHHHHcCCCeEEEEEEc
Confidence 99999776 233345678889999999999999654
No 158
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.58 E-value=8.7e-15 Score=130.56 Aligned_cols=102 Identities=15% Similarity=0.135 Sum_probs=87.6
Q ss_pred CCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccccCccEEEEcccc
Q 018346 127 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMF 206 (357)
Q Consensus 127 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~Ii~~~~~ 206 (357)
+.++.+|||+|||+|.+++.+++. +.+|+|+|+|+.+++.|++++..++++ +++..+|+.+....++||+|+++.+.
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~--g~~v~gvDi~~~~v~~a~~n~~~~~~~-v~~~~~d~~~~~~~~~fD~Vv~n~~~ 194 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKL--GGKALGVDIDPMVLPQAEANAKRNGVR-PRFLEGSLEAALPFGPFDLLVANLYA 194 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCGGGHHHHHHHHHHTTCC-CEEEESCHHHHGGGCCEEEEEEECCH
T ss_pred cCCCCEEEEecCCCcHHHHHHHHh--CCeEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChhhcCcCCCCCEEEECCcH
Confidence 457889999999999999999987 449999999999999999999998875 99999998763223689999998766
Q ss_pred cchhhHHHHHHHHHHhcccCceEEEEec
Q 018346 207 EHMKNYQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 207 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
++ ...+++.+.++|+|||++++..+
T Consensus 195 ~~---~~~~l~~~~~~LkpgG~lils~~ 219 (254)
T 2nxc_A 195 EL---HAALAPRYREALVPGGRALLTGI 219 (254)
T ss_dssp HH---HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HH---HHHHHHHHHHHcCCCCEEEEEee
Confidence 53 46889999999999999999755
No 159
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.58 E-value=4.8e-15 Score=132.53 Aligned_cols=108 Identities=13% Similarity=0.162 Sum_probs=90.2
Q ss_pred CCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCC---------------------------
Q 018346 126 RLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL--------------------------- 178 (357)
Q Consensus 126 ~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~--------------------------- 178 (357)
+..++.+|||+|||+|.++..++...+ .+|+|+|+|+.+++.++++....+.
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEK 131 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHH
Confidence 445678999999999999999887742 4999999999999999988754321
Q ss_pred --CCe-EEEEeccCCCcc--c---cCccEEEEccccc----chhhHHHHHHHHHHhcccCceEEEEec
Q 018346 179 --QNV-EIIVADISTFEM--E---ASYDRIYSIEMFE----HMKNYQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 179 --~~v-~~~~~d~~~~~~--~---~~fD~Ii~~~~~~----~~~~~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
.++ .++.+|+.+..+ + ++||+|+++.+++ +++++..+++++.++|||||++++..+
T Consensus 132 l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 199 (265)
T 2i62_A 132 LRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDA 199 (265)
T ss_dssp HHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEec
Confidence 027 999999987532 3 6799999999999 667889999999999999999999874
No 160
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.58 E-value=1.5e-14 Score=128.37 Aligned_cols=107 Identities=19% Similarity=0.367 Sum_probs=87.3
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHc--------CCCCeEEEEeccCC-Cc--cc-c
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL--------ELQNVEIIVADIST-FE--ME-A 195 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~--------~~~~v~~~~~d~~~-~~--~~-~ 195 (357)
.++.+|||||||+|.++..+++.+|+.+|+|+|+|+.+++.|++++... +++++.++.+|+.+ ++ ++ +
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccc
Confidence 4678999999999999999999988889999999999999999998876 77799999999987 33 22 6
Q ss_pred CccEEEEcccccchhh--------HHHHHHHHHHhcccCceEEEEec
Q 018346 196 SYDRIYSIEMFEHMKN--------YQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 196 ~fD~Ii~~~~~~~~~~--------~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
++|.|+...+-.+... ...+++.+.++|+|||.+++.+.
T Consensus 128 ~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td 174 (246)
T 2vdv_E 128 QLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITD 174 (246)
T ss_dssp CEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred ccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEec
Confidence 7899886543222111 15799999999999999999543
No 161
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.57 E-value=1.5e-14 Score=130.73 Aligned_cols=114 Identities=18% Similarity=0.193 Sum_probs=97.2
Q ss_pred HHHHHHHcCCCCCCEEEEECCcccHHHHHHHHH-CCCcEEEEEcCCHHHHHHHHHHHHHc-C--CCCeEEEEeccCCCcc
Q 018346 118 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQK-YSNCKITGICNSKTQKEFIEEQCRVL-E--LQNVEIIVADISTFEM 193 (357)
Q Consensus 118 l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~p~~~v~~vD~s~~~l~~a~~~~~~~-~--~~~v~~~~~d~~~~~~ 193 (357)
...++..+.+.++.+|||+|||+|.++..+++. .|+.+|+++|+|+.+++.|++++... + .++++++.+|+.+.+.
T Consensus 88 ~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~ 167 (280)
T 1i9g_A 88 AAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSEL 167 (280)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCC
T ss_pred HHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCC
Confidence 345666777888999999999999999999986 46789999999999999999999887 5 4589999999988654
Q ss_pred c-cCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 194 E-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 194 ~-~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
+ ++||+|+++. +++..+++++.++|+|||.+++.+++.
T Consensus 168 ~~~~~D~v~~~~-----~~~~~~l~~~~~~L~pgG~l~~~~~~~ 206 (280)
T 1i9g_A 168 PDGSVDRAVLDM-----LAPWEVLDAVSRLLVAGGVLMVYVATV 206 (280)
T ss_dssp CTTCEEEEEEES-----SCGGGGHHHHHHHEEEEEEEEEEESSH
T ss_pred CCCceeEEEECC-----cCHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 3 6899999954 355688999999999999999988764
No 162
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.57 E-value=9.9e-15 Score=136.20 Aligned_cols=103 Identities=27% Similarity=0.382 Sum_probs=89.7
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCccc-cCccEEEEccc
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEME-ASYDRIYSIEM 205 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~~~-~~fD~Ii~~~~ 205 (357)
.++.+|||+|||+|.++..+++. +..+|+|+|+| .+++.|++++..++++ +++++.+|+.+++.+ ++||+|+++.+
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~ 142 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKA-GARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWM 142 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCC
T ss_pred CCCCEEEEEeccchHHHHHHHHC-CCCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEccc
Confidence 46789999999999999999987 45699999999 4999999999998885 599999999998665 88999999876
Q ss_pred ccch---hhHHHHHHHHHHhcccCceEEEE
Q 018346 206 FEHM---KNYQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 206 ~~~~---~~~~~~l~~~~~~LkpgG~l~~~ 232 (357)
.+.+ .....++..+.++|||||.++..
T Consensus 143 ~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 143 GYCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp BBTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred cccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 4433 77889999999999999998743
No 163
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.57 E-value=1.4e-14 Score=130.83 Aligned_cols=113 Identities=19% Similarity=0.164 Sum_probs=97.0
Q ss_pred HHHHHHcCCCCCCEEEEECCcccHHHHHHHHH-CCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEEeccCCCccccC
Q 018346 119 ELYCERSRLEDGHTVLDVGCGWGSLSLYIAQK-YSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEMEAS 196 (357)
Q Consensus 119 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~p~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~ 196 (357)
..++..+.+.++.+|||+|||+|.++..+++. .|+.+|+++|+|+.+++.|++++...++ ++++++.+|+.+....++
T Consensus 102 ~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 181 (277)
T 1o54_A 102 SFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDEKD 181 (277)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSCCS
T ss_pred HHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccCCc
Confidence 35666677888999999999999999999998 5788999999999999999999998887 589999999987532367
Q ss_pred ccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 197 YDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 197 fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
||+|+++. +++..+++.+.++|+|||.+++.+++.
T Consensus 182 ~D~V~~~~-----~~~~~~l~~~~~~L~pgG~l~~~~~~~ 216 (277)
T 1o54_A 182 VDALFLDV-----PDPWNYIDKCWEALKGGGRFATVCPTT 216 (277)
T ss_dssp EEEEEECC-----SCGGGTHHHHHHHEEEEEEEEEEESSH
T ss_pred cCEEEECC-----cCHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 99999964 355688999999999999999988643
No 164
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.57 E-value=4.1e-15 Score=131.65 Aligned_cols=117 Identities=12% Similarity=0.140 Sum_probs=96.0
Q ss_pred HHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCC-CcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCc
Q 018346 115 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFE 192 (357)
Q Consensus 115 ~~~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~ 192 (357)
...+..++... ++.+|||||||+|..+..+++..| +.+|+++|+|+.+++.|++++...++. +|+++.+|+.+..
T Consensus 49 ~~~l~~l~~~~---~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l 125 (242)
T 3r3h_A 49 AQFMQMLIRLT---RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTL 125 (242)
T ss_dssp HHHHHHHHHHH---TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHH
T ss_pred HHHHHHHHhhc---CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHH
Confidence 33444444332 567999999999999999999875 789999999999999999999999885 8999999987642
Q ss_pred c-------ccCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEeccCC
Q 018346 193 M-------EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 193 ~-------~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 237 (357)
. .++||+|++... ..++..+++.+.++|+|||++++......
T Consensus 126 ~~~~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~~~~ 174 (242)
T 3r3h_A 126 HSLLNEGGEHQFDFIFIDAD---KTNYLNYYELALKLVTPKGLIAIDNIFWD 174 (242)
T ss_dssp HHHHHHHCSSCEEEEEEESC---GGGHHHHHHHHHHHEEEEEEEEEECSSSS
T ss_pred HHHhhccCCCCEeEEEEcCC---hHHhHHHHHHHHHhcCCCeEEEEECCccC
Confidence 2 268999999876 34667899999999999999999765543
No 165
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.57 E-value=8.4e-15 Score=127.83 Aligned_cols=107 Identities=20% Similarity=0.374 Sum_probs=90.7
Q ss_pred HHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCC--Cccc-cCc
Q 018346 121 YCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADIST--FEME-ASY 197 (357)
Q Consensus 121 l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~--~~~~-~~f 197 (357)
+++.+. .++.+|||+|||+|..+..+++. +.+++|+|+|+.+++.++++. .++..+|+.+ .+.+ ++|
T Consensus 25 l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~~~~~~~~~~~~~-------~~~~~~d~~~~~~~~~~~~f 94 (230)
T 3cc8_A 25 LLKHIK-KEWKEVLDIGCSSGALGAAIKEN--GTRVSGIEAFPEAAEQAKEKL-------DHVVLGDIETMDMPYEEEQF 94 (230)
T ss_dssp HHTTCC-TTCSEEEEETCTTSHHHHHHHTT--TCEEEEEESSHHHHHHHHTTS-------SEEEESCTTTCCCCSCTTCE
T ss_pred HHHHhc-cCCCcEEEeCCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhC-------CcEEEcchhhcCCCCCCCcc
Confidence 444444 57789999999999999999987 589999999999998887642 3788899876 3333 689
Q ss_pred cEEEEcccccchhhHHHHHHHHHHhcccCceEEEEeccCC
Q 018346 198 DRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 198 D~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 237 (357)
|+|+++.+++|+++...+++++.++|+|||.+++..++..
T Consensus 95 D~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 134 (230)
T 3cc8_A 95 DCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASIPNVS 134 (230)
T ss_dssp EEEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEEECTT
T ss_pred CEEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 9999999999999999999999999999999999887654
No 166
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.57 E-value=2.3e-14 Score=127.28 Aligned_cols=113 Identities=17% Similarity=0.166 Sum_probs=93.5
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCC-CcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCC-c
Q 018346 116 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTF-E 192 (357)
Q Consensus 116 ~~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~-~ 192 (357)
.++..++.. .++.+|||||||+|..+..+++.+| +.+|+++|+|+.+++.|++++...++. +|+++.+|+.+. +
T Consensus 69 ~ll~~l~~~---~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~ 145 (247)
T 1sui_A 69 QFLSMLLKL---INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLD 145 (247)
T ss_dssp HHHHHHHHH---TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHH
T ss_pred HHHHHHHHh---hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHH
Confidence 344444443 3567999999999999999999987 789999999999999999999998884 899999998763 2
Q ss_pred -c------ccCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEec
Q 018346 193 -M------EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 193 -~------~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
. .++||+|++.... .++..+++.+.++|||||++++...
T Consensus 146 ~l~~~~~~~~~fD~V~~d~~~---~~~~~~l~~~~~~LkpGG~lv~d~~ 191 (247)
T 1sui_A 146 EMIKDEKNHGSYDFIFVDADK---DNYLNYHKRLIDLVKVGGVIGYDNT 191 (247)
T ss_dssp HHHHSGGGTTCBSEEEECSCS---TTHHHHHHHHHHHBCTTCCEEEECT
T ss_pred HHHhccCCCCCEEEEEEcCch---HHHHHHHHHHHHhCCCCeEEEEecC
Confidence 1 3679999998653 4678899999999999999988643
No 167
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.56 E-value=5.6e-15 Score=134.23 Aligned_cols=104 Identities=16% Similarity=0.165 Sum_probs=82.1
Q ss_pred CCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHc-----------------CC-------------
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL-----------------EL------------- 178 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~-----------------~~------------- 178 (357)
++.+|||||||+|..+..++. .++.+|+|+|+|+.+++.|++++... +.
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSAC-SHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGG-GGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhc-cCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 678999999999995544443 33679999999999999998865321 10
Q ss_pred CCeEEEEeccCC-Ccc------ccCccEEEEcccccc----hhhHHHHHHHHHHhcccCceEEEEe
Q 018346 179 QNVEIIVADIST-FEM------EASYDRIYSIEMFEH----MKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 179 ~~v~~~~~d~~~-~~~------~~~fD~Ii~~~~~~~----~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
..+.++.+|+.+ .++ +++||+|+++.++++ ++++..+++++.++|||||++++..
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 015678889887 432 146999999999999 6789999999999999999999964
No 168
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.56 E-value=1.1e-14 Score=135.95 Aligned_cols=115 Identities=12% Similarity=0.107 Sum_probs=93.3
Q ss_pred HHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEEeccCCCccccC
Q 018346 118 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEMEAS 196 (357)
Q Consensus 118 l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~ 196 (357)
...+++..+..++.+|||||||+|..+..+++.+|+.+++++|+ +.++. +++....+. ++|+++.+|+.+ +.+ +
T Consensus 173 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~-~~p-~ 247 (348)
T 3lst_A 173 HLILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLR-EVP-H 247 (348)
T ss_dssp HHHHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTT-CCC-C
T ss_pred HHHHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCCC-CCC-C
Confidence 34567777778889999999999999999999999999999999 44444 333222333 379999999974 333 8
Q ss_pred ccEEEEcccccchhhH--HHHHHHHHHhcccCceEEEEeccCC
Q 018346 197 YDRIYSIEMFEHMKNY--QNLLKKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 197 fD~Ii~~~~~~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~ 237 (357)
||+|++..++|++++. ..+++++.++|||||++++..+..+
T Consensus 248 ~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~ 290 (348)
T 3lst_A 248 ADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVP 290 (348)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBC
T ss_pred CcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 9999999999999776 6999999999999999999876544
No 169
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.56 E-value=4.4e-14 Score=123.47 Aligned_cols=110 Identities=24% Similarity=0.175 Sum_probs=90.9
Q ss_pred HHHHcC--CCCCCEEEEECCcccHHHHHHHHHC-CCcEEEEEcCCHHHHHHHHHHHHHcC-----CCCeEEEEeccCCCc
Q 018346 121 YCERSR--LEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVLE-----LQNVEIIVADISTFE 192 (357)
Q Consensus 121 l~~~~~--~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~~vD~s~~~l~~a~~~~~~~~-----~~~v~~~~~d~~~~~ 192 (357)
+++.+. +.++.+|||+|||+|..+..+++.. |..+|+++|+|+.+++.+++++...+ .++++++.+|+....
T Consensus 67 ~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 146 (226)
T 1i1n_A 67 ALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY 146 (226)
T ss_dssp HHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC
T ss_pred HHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCc
Confidence 444443 5678999999999999999999875 55799999999999999999988765 358999999987654
Q ss_pred cc-cCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 193 ME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 193 ~~-~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
.. ++||+|++..+++++. +.+.++|||||++++...+.
T Consensus 147 ~~~~~fD~i~~~~~~~~~~------~~~~~~LkpgG~lv~~~~~~ 185 (226)
T 1i1n_A 147 AEEAPYDAIHVGAAAPVVP------QALIDQLKPGGRLILPVGPA 185 (226)
T ss_dssp GGGCCEEEEEECSBBSSCC------HHHHHTEEEEEEEEEEESCT
T ss_pred ccCCCcCEEEECCchHHHH------HHHHHhcCCCcEEEEEEecC
Confidence 33 6899999999887653 57889999999999987654
No 170
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.56 E-value=2e-14 Score=124.86 Aligned_cols=105 Identities=12% Similarity=0.035 Sum_probs=89.1
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCccc-cCccEEEEccc
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEME-ASYDRIYSIEM 205 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~~~-~~fD~Ii~~~~ 205 (357)
.++.+|||||||+|.+++.+++..|..+|+++|+|+.+++.|++|+..+|+. +|++..+|..+...+ .+||+|++..+
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~IviaG~ 93 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITIAGM 93 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEEEEcCC
Confidence 4678999999999999999999888789999999999999999999999985 799999998653222 36999987654
Q ss_pred ccchhhHHHHHHHHHHhcccCceEEEEec
Q 018346 206 FEHMKNYQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 206 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
-. .....+++...+.|+|+|+++++..
T Consensus 94 Gg--~~i~~Il~~~~~~L~~~~~lVlq~~ 120 (225)
T 3kr9_A 94 GG--RLIARILEEGLGKLANVERLILQPN 120 (225)
T ss_dssp CH--HHHHHHHHHTGGGCTTCCEEEEEES
T ss_pred Ch--HHHHHHHHHHHHHhCCCCEEEEECC
Confidence 22 3367889999999999999988655
No 171
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.56 E-value=1.8e-14 Score=132.50 Aligned_cols=114 Identities=16% Similarity=0.083 Sum_probs=94.8
Q ss_pred HHcCCCCCCEEEEECCcccHHHHHHHHHCC-CcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-ccCccEE
Q 018346 123 ERSRLEDGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-EASYDRI 200 (357)
Q Consensus 123 ~~~~~~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~I 200 (357)
..+...++.+|||+|||+|..+..+++..+ ..+|+|+|+|+.+++.+++++...|+++++++++|+.+++. .++||+|
T Consensus 112 ~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~I 191 (315)
T 1ixk_A 112 VALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKI 191 (315)
T ss_dssp HHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEE
T ss_pred HHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEE
Confidence 344677889999999999999999998864 47999999999999999999999998889999999987653 3689999
Q ss_pred EEcccccch------h----------------hHHHHHHHHHHhcccCceEEEEeccC
Q 018346 201 YSIEMFEHM------K----------------NYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 201 i~~~~~~~~------~----------------~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
+++.+.... + ....+++.+.++|||||++++.+.+.
T Consensus 192 l~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 192 LLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSL 249 (315)
T ss_dssp EEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred EEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 997663211 1 12589999999999999999976543
No 172
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.56 E-value=2.4e-14 Score=125.33 Aligned_cols=107 Identities=17% Similarity=0.154 Sum_probs=87.0
Q ss_pred HHcCCCCCCEEEEECCcccHHHHHHHHHC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCc----cccCc
Q 018346 123 ERSRLEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE----MEASY 197 (357)
Q Consensus 123 ~~~~~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~----~~~~f 197 (357)
+.+.+.++.+|||+|||+|.++..+++.. |+.+|+|+|+|+.+++.++++++.. ++++++.+|+.+.. ..++|
T Consensus 67 ~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~ 144 (227)
T 1g8a_A 67 KNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER--RNIVPILGDATKPEEYRALVPKV 144 (227)
T ss_dssp CCCCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC--TTEEEEECCTTCGGGGTTTCCCE
T ss_pred HhcCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc--CCCEEEEccCCCcchhhcccCCc
Confidence 33446688999999999999999999875 5689999999999999999888655 48999999998732 23679
Q ss_pred cEEEEcccccchhhHHHHHHHHHHhcccCceEEEEe
Q 018346 198 DRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 198 D~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
|+|+++.+ .......++.++.++|||||.+++..
T Consensus 145 D~v~~~~~--~~~~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 145 DVIFEDVA--QPTQAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp EEEEECCC--STTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEECCC--CHhHHHHHHHHHHHhcCCCCEEEEEE
Confidence 99999876 22223455999999999999999973
No 173
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.55 E-value=5.7e-14 Score=127.15 Aligned_cols=117 Identities=11% Similarity=0.159 Sum_probs=90.0
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcC-CHHHHHHHHHHH-----HHcCCC-----CeEEEE
Q 018346 117 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICN-SKTQKEFIEEQC-----RVLELQ-----NVEIIV 185 (357)
Q Consensus 117 ~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~-s~~~l~~a~~~~-----~~~~~~-----~v~~~~ 185 (357)
+.+.+.......++.+|||+|||+|.+++.+++.. ..+|+++|+ |+.+++.|++++ ...++. ++++..
T Consensus 67 l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~ 145 (281)
T 3bzb_A 67 LADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAG-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVP 145 (281)
T ss_dssp HHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTT-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEE
T ss_pred HHHHHHhcchhcCCCeEEEecccccHHHHHHHHcC-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEE
Confidence 33444444444577899999999999999998763 349999999 899999999999 555543 688887
Q ss_pred eccCCCc-------cccCccEEEEcccccchhhHHHHHHHHHHhcc---c--CceEEEEec
Q 018346 186 ADISTFE-------MEASYDRIYSIEMFEHMKNYQNLLKKISKWMK---E--DTLLFVHHF 234 (357)
Q Consensus 186 ~d~~~~~-------~~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~Lk---p--gG~l~~~~~ 234 (357)
.|+.+.. ..++||+|++..++++.++...+++.+.++|+ | ||.+++...
T Consensus 146 ~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~ 206 (281)
T 3bzb_A 146 YRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFT 206 (281)
T ss_dssp CCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEEC
T ss_pred ecCCCccHHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEE
Confidence 7765421 13689999999999999999999999999999 9 999877543
No 174
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.55 E-value=6.9e-14 Score=123.81 Aligned_cols=111 Identities=15% Similarity=0.137 Sum_probs=95.5
Q ss_pred HHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEEeccCCCc-cccC
Q 018346 119 ELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFE-MEAS 196 (357)
Q Consensus 119 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~-~~~~ 196 (357)
..++..+.+.++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.|+++....++ +++++..+|+.+.. ..++
T Consensus 81 ~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 158 (248)
T 2yvl_A 81 FYIALKLNLNKEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGI 158 (248)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTC
T ss_pred HHHHHhcCCCCCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCc
Confidence 35566677778899999999999999999988 78999999999999999999988887 58999999998854 3368
Q ss_pred ccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 197 YDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 197 fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
||+|+++.+ ++..+++.+.++|+|||.+++..++.
T Consensus 159 ~D~v~~~~~-----~~~~~l~~~~~~L~~gG~l~~~~~~~ 193 (248)
T 2yvl_A 159 FHAAFVDVR-----EPWHYLEKVHKSLMEGAPVGFLLPTA 193 (248)
T ss_dssp BSEEEECSS-----CGGGGHHHHHHHBCTTCEEEEEESSH
T ss_pred ccEEEECCc-----CHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 999998543 55678999999999999999988753
No 175
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.54 E-value=7.7e-14 Score=130.39 Aligned_cols=116 Identities=16% Similarity=0.090 Sum_probs=98.1
Q ss_pred HHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccccCcc
Q 018346 119 ELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYD 198 (357)
Q Consensus 119 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~fD 198 (357)
..+++..+..+..+|+|||||+|..+..+++++|+.+++..|. |.+++.|+++....+.++|+++.+|+.+.+. ..+|
T Consensus 169 ~~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~-~~~D 246 (353)
T 4a6d_A 169 RSVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPL-PEAD 246 (353)
T ss_dssp HHHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCC-CCCS
T ss_pred HHHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCCC-CCce
Confidence 4455556667778999999999999999999999999999998 8899999988766566799999999987543 4689
Q ss_pred EEEEcccccchhhH--HHHHHHHHHhcccCceEEEEeccC
Q 018346 199 RIYSIEMFEHMKNY--QNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 199 ~Ii~~~~~~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
+|++..++|++++. .++++++++.|+|||++++.....
T Consensus 247 ~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~ 286 (353)
T 4a6d_A 247 LYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLL 286 (353)
T ss_dssp EEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCC
T ss_pred EEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeee
Confidence 99999999999654 678999999999999999977643
No 176
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.54 E-value=1.5e-14 Score=121.02 Aligned_cols=96 Identities=13% Similarity=0.113 Sum_probs=79.5
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccccCccEEEEccccc
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMFE 207 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~Ii~~~~~~ 207 (357)
.++.+|||+|||+|.++..+++. + +|+|+|+|+.+++. .++++++++|+.+....++||+|+++++++
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~--~-~v~gvD~s~~~~~~---------~~~~~~~~~d~~~~~~~~~fD~i~~n~~~~ 89 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKR--N-TVVSTDLNIRALES---------HRGGNLVRADLLCSINQESVDVVVFNPPYV 89 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTT--S-EEEEEESCHHHHHT---------CSSSCEEECSTTTTBCGGGCSEEEECCCCB
T ss_pred CCCCeEEEeccCccHHHHHHHhc--C-cEEEEECCHHHHhc---------ccCCeEEECChhhhcccCCCCEEEECCCCc
Confidence 35679999999999999999987 4 99999999999876 237899999998743337899999999998
Q ss_pred chhh---------HHHHHHHHHHhcccCceEEEEeccC
Q 018346 208 HMKN---------YQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 208 ~~~~---------~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
+.++ ...+++++.+.| |||.+++..+..
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~ 126 (170)
T 3q87_B 90 PDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA 126 (170)
T ss_dssp TTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG
T ss_pred cCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC
Confidence 6533 356788888888 999999977544
No 177
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.54 E-value=3e-14 Score=123.99 Aligned_cols=94 Identities=16% Similarity=0.255 Sum_probs=84.2
Q ss_pred CCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc-cCccEEEEcccccc
Q 018346 130 GHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEMFEH 208 (357)
Q Consensus 130 ~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~Ii~~~~~~~ 208 (357)
+.+|||+|||+|.++..++.. +|+|+|+.+++.++++ +++++.+|+.+++.+ ++||+|++..++++
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~-------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 114 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR-------GVFVLKGTAENLPLKDESFDFALMVTTICF 114 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT-------TCEEEECBTTBCCSCTTCEEEEEEESCGGG
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc-------CCEEEEcccccCCCCCCCeeEEEEcchHhh
Confidence 789999999999999887642 9999999999988875 678999999887655 68999999999999
Q ss_pred hhhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 209 MKNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 209 ~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
++++..+++++.++|+|||.+++..+..
T Consensus 115 ~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 142 (219)
T 1vlm_A 115 VDDPERALKEAYRILKKGGYLIVGIVDR 142 (219)
T ss_dssp SSCHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred ccCHHHHHHHHHHHcCCCcEEEEEEeCC
Confidence 9999999999999999999999988754
No 178
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.54 E-value=4.2e-14 Score=123.04 Aligned_cols=105 Identities=14% Similarity=0.055 Sum_probs=89.9
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCccc-cCccEEEEccc
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEME-ASYDRIYSIEM 205 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~~~-~~fD~Ii~~~~ 205 (357)
.++.+|||||||+|.+++.+++..|..+|+++|+|+.+++.|++|+..+|+. +|++..+|..+...+ ++||+|++.++
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGm 99 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGM 99 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeCC
Confidence 4678999999999999999999877779999999999999999999999985 799999999875544 37999887554
Q ss_pred ccchhhHHHHHHHHHHhcccCceEEEEec
Q 018346 206 FEHMKNYQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 206 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
-. .....++....+.|+++|.++++..
T Consensus 100 Gg--~lI~~IL~~~~~~l~~~~~lIlqp~ 126 (230)
T 3lec_A 100 GG--RLIADILNNDIDKLQHVKTLVLQPN 126 (230)
T ss_dssp CH--HHHHHHHHHTGGGGTTCCEEEEEES
T ss_pred ch--HHHHHHHHHHHHHhCcCCEEEEECC
Confidence 33 3467788888999999999888764
No 179
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.54 E-value=3.6e-14 Score=124.21 Aligned_cols=110 Identities=18% Similarity=0.126 Sum_probs=90.7
Q ss_pred HHHHHc--CCCCCCEEEEECCcccHHHHHHHHHCC------CcEEEEEcCCHHHHHHHHHHHHHcC-----CCCeEEEEe
Q 018346 120 LYCERS--RLEDGHTVLDVGCGWGSLSLYIAQKYS------NCKITGICNSKTQKEFIEEQCRVLE-----LQNVEIIVA 186 (357)
Q Consensus 120 ~l~~~~--~~~~~~~vLDiGcG~G~~~~~la~~~p------~~~v~~vD~s~~~l~~a~~~~~~~~-----~~~v~~~~~ 186 (357)
.+++.+ .+.++.+|||+|||+|..+..+++..+ ..+|+++|+|+.+++.|++++...+ .++++++.+
T Consensus 73 ~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 152 (227)
T 1r18_A 73 FALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEG 152 (227)
T ss_dssp HHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEES
T ss_pred HHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEEC
Confidence 344444 356788999999999999999998653 2599999999999999999988765 458999999
Q ss_pred ccCCCccc-cCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEecc
Q 018346 187 DISTFEME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFC 235 (357)
Q Consensus 187 d~~~~~~~-~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 235 (357)
|..+.... ++||+|++..+++++. +.+.+.|||||++++....
T Consensus 153 d~~~~~~~~~~fD~I~~~~~~~~~~------~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 153 DGRKGYPPNAPYNAIHVGAAAPDTP------TELINQLASGGRLIVPVGP 196 (227)
T ss_dssp CGGGCCGGGCSEEEEEECSCBSSCC------HHHHHTEEEEEEEEEEESC
T ss_pred CcccCCCcCCCccEEEECCchHHHH------HHHHHHhcCCCEEEEEEec
Confidence 98873223 6899999999988764 6788999999999998764
No 180
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.53 E-value=3.9e-14 Score=133.37 Aligned_cols=111 Identities=18% Similarity=0.153 Sum_probs=94.0
Q ss_pred HHHHHHHcC-CCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccccC
Q 018346 118 LELYCERSR-LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEAS 196 (357)
Q Consensus 118 l~~l~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 196 (357)
...+++.+. ..++.+|||||||+|..+..+++.+|+.+++++|+ +.+++.|++ .++++++.+|+.+ +.+.
T Consensus 197 ~~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~~~- 267 (372)
T 1fp1_D 197 MKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP------LSGIEHVGGDMFA-SVPQ- 267 (372)
T ss_dssp HHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------CTTEEEEECCTTT-CCCC-
T ss_pred HHHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh------cCCCEEEeCCccc-CCCC-
Confidence 345666664 56778999999999999999999999999999999 888877654 2479999999987 4444
Q ss_pred ccEEEEcccccchhhHH--HHHHHHHHhcccCceEEEEeccCC
Q 018346 197 YDRIYSIEMFEHMKNYQ--NLLKKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 197 fD~Ii~~~~~~~~~~~~--~~l~~~~~~LkpgG~l~~~~~~~~ 237 (357)
||+|++..++|++++.. .+++++.++|||||++++..+..+
T Consensus 268 ~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 310 (372)
T 1fp1_D 268 GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILP 310 (372)
T ss_dssp EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 99999999999997776 999999999999999999876543
No 181
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.53 E-value=3.7e-14 Score=122.63 Aligned_cols=102 Identities=19% Similarity=0.207 Sum_probs=87.6
Q ss_pred CCCEEEEECCcccHHHHHHHHHCC-CcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCC-cc-ccCccEEEEcc
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTF-EM-EASYDRIYSIE 204 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~p-~~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~-~~-~~~fD~Ii~~~ 204 (357)
++.+|||+|||+|..+..+++..| +.+|+++|+|+.+++.|++++...++. +++++.+|..+. +. ++ ||+|+++.
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~ 134 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDC 134 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEET
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcC
Confidence 567999999999999999998877 789999999999999999999888774 699999998763 22 25 99999985
Q ss_pred cccchhhHHHHHHHHHHhcccCceEEEEec
Q 018346 205 MFEHMKNYQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 205 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
. ..++..+++.+.++|||||++++...
T Consensus 135 ~---~~~~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 135 D---VFNGADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp T---TSCHHHHHHHHGGGEEEEEEEEEESS
T ss_pred C---hhhhHHHHHHHHHhcCCCeEEEEECc
Confidence 4 34678899999999999999988654
No 182
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.53 E-value=2.8e-14 Score=119.13 Aligned_cols=108 Identities=14% Similarity=0.130 Sum_probs=87.5
Q ss_pred HHHHHHcC-CCCCCEEEEECCcccHHHHHHHHHC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCc----
Q 018346 119 ELYCERSR-LEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE---- 192 (357)
Q Consensus 119 ~~l~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~---- 192 (357)
..+++... ..++.+|||+|||+|.++..+++.+ |+.+++++|+|+ +++. ++++++.+|+.+.+
T Consensus 11 ~~~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----------~~~~~~~~d~~~~~~~~~ 79 (180)
T 1ej0_A 11 DEIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI----------VGVDFLQGDFRDELVMKA 79 (180)
T ss_dssp HHHHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC----------TTEEEEESCTTSHHHHHH
T ss_pred HHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc----------CcEEEEEcccccchhhhh
Confidence 34445444 5678899999999999999999884 678999999999 6432 48999999998864
Q ss_pred ----cc-cCccEEEEcccccchhhH-----------HHHHHHHHHhcccCceEEEEeccCC
Q 018346 193 ----ME-ASYDRIYSIEMFEHMKNY-----------QNLLKKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 193 ----~~-~~fD~Ii~~~~~~~~~~~-----------~~~l~~~~~~LkpgG~l~~~~~~~~ 237 (357)
.+ ++||+|+++.++++.... ..+++.+.++|+|||.+++..+...
T Consensus 80 ~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 140 (180)
T 1ej0_A 80 LLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGE 140 (180)
T ss_dssp HHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESST
T ss_pred hhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCC
Confidence 33 689999999988776443 6899999999999999999877543
No 183
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.53 E-value=4.3e-14 Score=123.96 Aligned_cols=105 Identities=11% Similarity=0.060 Sum_probs=89.6
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCcccc-CccEEEEccc
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEMEA-SYDRIYSIEM 205 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~-~fD~Ii~~~~ 205 (357)
.++.+|||||||+|.+++.+++..|..+|+++|+|+.+++.|++|+..+|+. +|++..+|..+...++ +||+|++..+
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Iviagm 99 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGM 99 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeCC
Confidence 4778999999999999999999877779999999999999999999999985 6999999998755443 5999887544
Q ss_pred ccchhhHHHHHHHHHHhcccCceEEEEec
Q 018346 206 FEHMKNYQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 206 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
-. .....+++...+.|+++|+++++..
T Consensus 100 Gg--~lI~~IL~~~~~~L~~~~~lIlq~~ 126 (244)
T 3gnl_A 100 GG--TLIRTILEEGAAKLAGVTKLILQPN 126 (244)
T ss_dssp CH--HHHHHHHHHTGGGGTTCCEEEEEES
T ss_pred ch--HHHHHHHHHHHHHhCCCCEEEEEcC
Confidence 32 3467788899999999999988764
No 184
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.53 E-value=5.5e-14 Score=130.04 Aligned_cols=103 Identities=23% Similarity=0.332 Sum_probs=88.0
Q ss_pred CCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCccc-cCccEEEEcc
Q 018346 127 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEME-ASYDRIYSIE 204 (357)
Q Consensus 127 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~~~-~~fD~Ii~~~ 204 (357)
..++.+|||+|||+|.++..+++. +..+|+|+|+| .+++.|++++..+++. +++++.+|+.+++.+ ++||+|++..
T Consensus 36 ~~~~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~ 113 (328)
T 1g6q_1 36 LFKDKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEW 113 (328)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHT-CCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECC
T ss_pred hcCCCEEEEecCccHHHHHHHHHC-CCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeC
Confidence 346789999999999999999986 34599999999 5899999999988874 799999999987665 7899999986
Q ss_pred cccc---hhhHHHHHHHHHHhcccCceEEE
Q 018346 205 MFEH---MKNYQNLLKKISKWMKEDTLLFV 231 (357)
Q Consensus 205 ~~~~---~~~~~~~l~~~~~~LkpgG~l~~ 231 (357)
+.+. ......++..+.++|||||.++.
T Consensus 114 ~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 114 MGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp CBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred chhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 5443 35678899999999999999874
No 185
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.53 E-value=3.7e-14 Score=140.66 Aligned_cols=110 Identities=21% Similarity=0.295 Sum_probs=92.3
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCc--c-ccCccEEEEcc
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE--M-EASYDRIYSIE 204 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~--~-~~~fD~Ii~~~ 204 (357)
..+.+|||||||.|.++..||+. |++|+|+|+|+.+|+.|+..+...|..+|+|.+++++++. . +++||+|+|..
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~--ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e 142 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASK--GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLS 142 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEES
T ss_pred CCCCeEEEECCCCcHHHHHHHhC--CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECc
Confidence 35789999999999999999988 8999999999999999999998877448999999998762 2 26899999999
Q ss_pred cccchhhHHHH--HHHHHHhcccCceEEEEeccCCCC
Q 018346 205 MFEHMKNYQNL--LKKISKWMKEDTLLFVHHFCHKTF 239 (357)
Q Consensus 205 ~~~~~~~~~~~--l~~~~~~LkpgG~l~~~~~~~~~~ 239 (357)
+++|++++..+ +..+.+.|+++|..++..+.....
T Consensus 143 ~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~~e~ 179 (569)
T 4azs_A 143 VFHHIVHLHGIDEVKRLLSRLADVTQAVILELAVKEE 179 (569)
T ss_dssp CHHHHHHHHCHHHHHHHHHHHHHHSSEEEEECCCTTS
T ss_pred chhcCCCHHHHHHHHHHHHHhccccceeeEEeccccc
Confidence 99999776543 445777899999888876655443
No 186
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.52 E-value=8.7e-14 Score=122.73 Aligned_cols=113 Identities=19% Similarity=0.163 Sum_probs=93.3
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCC-CcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCc-
Q 018346 116 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFE- 192 (357)
Q Consensus 116 ~~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~- 192 (357)
..+..++.. .++.+|||||||+|..+..+++..| +.+|+++|+|+.+++.|++++...|+. +++++.+|..+..
T Consensus 60 ~~l~~l~~~---~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~ 136 (237)
T 3c3y_A 60 QLMSFVLKL---VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALD 136 (237)
T ss_dssp HHHHHHHHH---TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHH
T ss_pred HHHHHHHHh---hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHH
Confidence 344444443 3567999999999999999999986 789999999999999999999998885 7999999987631
Q ss_pred -c------ccCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEec
Q 018346 193 -M------EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 193 -~------~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
. .++||+|++.... .++..+++.+.++|+|||++++...
T Consensus 137 ~l~~~~~~~~~fD~I~~d~~~---~~~~~~l~~~~~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 137 NLLQGQESEGSYDFGFVDADK---PNYIKYHERLMKLVKVGGIVAYDNT 182 (237)
T ss_dssp HHHHSTTCTTCEEEEEECSCG---GGHHHHHHHHHHHEEEEEEEEEECT
T ss_pred HHHhccCCCCCcCEEEECCch---HHHHHHHHHHHHhcCCCeEEEEecC
Confidence 1 3679999987543 4678899999999999999988644
No 187
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.52 E-value=6.7e-14 Score=134.26 Aligned_cols=132 Identities=18% Similarity=0.273 Sum_probs=101.5
Q ss_pred cCCCCccccccCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHH
Q 018346 93 GKYFKYSCCYFSDASKTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQ 172 (357)
Q Consensus 93 ~~~~~y~~~~f~~~~~~l~~~~~~~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~ 172 (357)
+-.+.++++.|...+ ......+++.+++.+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++|
T Consensus 253 g~~~~~~~~~f~q~n---~~~~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~~n 327 (433)
T 1uwv_A 253 GLRLTFSPRDFIQVN---AGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQQN 327 (433)
T ss_dssp TEEEECCSSSCCCSB---HHHHHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHHHH
T ss_pred CEEEEECcccccccC---HHHHHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHHHH
Confidence 334445555555322 1223456667777777777889999999999999999987 68999999999999999999
Q ss_pred HHHcCCCCeEEEEeccCCC----ccc-cCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEe
Q 018346 173 CRVLELQNVEIIVADISTF----EME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 173 ~~~~~~~~v~~~~~d~~~~----~~~-~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
+..+++++++|+++|+.+. +.. ++||+|+++++..... .+++.+.+ ++|++.+++++
T Consensus 328 ~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~dPPr~g~~---~~~~~l~~-~~p~~ivyvsc 389 (433)
T 1uwv_A 328 ARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAA---GVMQQIIK-LEPIRIVYVSC 389 (433)
T ss_dssp HHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEECCCTTCCH---HHHHHHHH-HCCSEEEEEES
T ss_pred HHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEECCCCccHH---HHHHHHHh-cCCCeEEEEEC
Confidence 9999988999999999873 222 5799999999987663 45555543 78999888854
No 188
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.52 E-value=6.3e-14 Score=120.09 Aligned_cols=106 Identities=19% Similarity=0.254 Sum_probs=82.9
Q ss_pred HHHHHcC-CCCCCEEEEECCcccHHHHHHHHHCC--CcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCc----
Q 018346 120 LYCERSR-LEDGHTVLDVGCGWGSLSLYIAQKYS--NCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE---- 192 (357)
Q Consensus 120 ~l~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~p--~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~---- 192 (357)
.+.+... +.++.+|||+|||+|.++..+++..| +.+|+|+|+|+.+ ..++++++++|+.+.+
T Consensus 12 ~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~~~v~~~~~d~~~~~~~~~ 80 (201)
T 2plw_A 12 ELDNKYLFLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PIPNVYFIQGEIGKDNMNNI 80 (201)
T ss_dssp HHHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CCTTCEEEECCTTTTSSCCC
T ss_pred HHHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CCCCceEEEccccchhhhhh
Confidence 3444444 46788999999999999999999987 6899999999842 2347999999998765
Q ss_pred ---------------------cc-cCccEEEEcccccch----hhH-------HHHHHHHHHhcccCceEEEEeccC
Q 018346 193 ---------------------ME-ASYDRIYSIEMFEHM----KNY-------QNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 193 ---------------------~~-~~fD~Ii~~~~~~~~----~~~-------~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
.+ ++||+|+++.++++. .+. ..+++.+.++|||||.+++..+..
T Consensus 81 ~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 157 (201)
T 2plw_A 81 KNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLG 157 (201)
T ss_dssp -----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred ccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCC
Confidence 33 689999999877652 222 247889999999999999876643
No 189
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.52 E-value=4.2e-14 Score=124.81 Aligned_cols=103 Identities=18% Similarity=0.158 Sum_probs=88.4
Q ss_pred CCCEEEEECCcccHHHHHHHHHCC-CcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCcc-------------
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEM------------- 193 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~p-~~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~~------------- 193 (357)
++.+|||+|||+|..+..+++.+| +.+|+++|+|+.+++.|++++...+.+ +++++.+|+.+...
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 139 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWAS 139 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGT
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccccc
Confidence 678999999999999999999986 689999999999999999999988875 59999999865311
Q ss_pred ----c-cCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEec
Q 018346 194 ----E-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 194 ----~-~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
. ++||+|++.... +++..+++.+.++|+|||++++...
T Consensus 140 ~f~~~~~~fD~I~~~~~~---~~~~~~l~~~~~~L~pgG~lv~~~~ 182 (239)
T 2hnk_A 140 DFAFGPSSIDLFFLDADK---ENYPNYYPLILKLLKPGGLLIADNV 182 (239)
T ss_dssp TTCCSTTCEEEEEECSCG---GGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred cccCCCCCcCEEEEeCCH---HHHHHHHHHHHHHcCCCeEEEEEcc
Confidence 1 579999998654 4567889999999999999998654
No 190
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.52 E-value=1.1e-13 Score=130.36 Aligned_cols=105 Identities=10% Similarity=0.078 Sum_probs=90.5
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCC-Ccc--ccCccEEEEcc
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADIST-FEM--EASYDRIYSIE 204 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~-~~~--~~~fD~Ii~~~ 204 (357)
.++.+|||+| |+|.++..++...|..+|+++|+|+.+++.|+++++..|+++++++.+|+.+ ++. .++||+|++++
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~ 249 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDP 249 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECC
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECC
Confidence 3578999999 9999999999887668999999999999999999999888789999999988 543 25899999999
Q ss_pred cccchhhHHHHHHHHHHhcccCceE-EEEec
Q 018346 205 MFEHMKNYQNLLKKISKWMKEDTLL-FVHHF 234 (357)
Q Consensus 205 ~~~~~~~~~~~l~~~~~~LkpgG~l-~~~~~ 234 (357)
+++... ...+++++.++|||||.+ ++++.
T Consensus 250 p~~~~~-~~~~l~~~~~~LkpgG~~~~~~~~ 279 (373)
T 2qm3_A 250 PETLEA-IRAFVGRGIATLKGPRCAGYFGIT 279 (373)
T ss_dssp CSSHHH-HHHHHHHHHHTBCSTTCEEEEEEC
T ss_pred CCchHH-HHHHHHHHHHHcccCCeEEEEEEe
Confidence 886553 588999999999999954 55443
No 191
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.52 E-value=8.4e-14 Score=130.89 Aligned_cols=111 Identities=18% Similarity=0.191 Sum_probs=91.8
Q ss_pred HHHHHHHcC-CCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccccC
Q 018346 118 LELYCERSR-LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEAS 196 (357)
Q Consensus 118 l~~l~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 196 (357)
...+++.+. ..+..+|||||||+|..+..+++.+|+.+++++|+ +.+++.++++ ++|+|+.+|+.+ +.+..
T Consensus 191 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------~~v~~~~~d~~~-~~p~~ 262 (368)
T 3reo_A 191 MKKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF------SGVEHLGGDMFD-GVPKG 262 (368)
T ss_dssp HHHHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC------TTEEEEECCTTT-CCCCC
T ss_pred HHHHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc------CCCEEEecCCCC-CCCCC
Confidence 344555554 56778999999999999999999999999999999 8887766532 489999999987 44444
Q ss_pred ccEEEEcccccchhh--HHHHHHHHHHhcccCceEEEEeccCC
Q 018346 197 YDRIYSIEMFEHMKN--YQNLLKKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 197 fD~Ii~~~~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~ 237 (357)
|+|++..++|++++ ..+++++++++|||||++++.....+
T Consensus 263 -D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 304 (368)
T 3reo_A 263 -DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILP 304 (368)
T ss_dssp -SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCC
T ss_pred -CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 99999999998854 45899999999999999999877544
No 192
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.51 E-value=8.1e-14 Score=122.52 Aligned_cols=104 Identities=12% Similarity=0.171 Sum_probs=88.6
Q ss_pred CCCEEEEECCcccHHHHHHHHHCC-CcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCc----c-c--cCccE
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFE----M-E--ASYDR 199 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~p-~~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~----~-~--~~fD~ 199 (357)
++.+|||+|||+|..+..+++..| +.+|+++|+|+.+++.|++++...++. +++++.+|+.+.. . . ++||+
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~ 151 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDL 151 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCE
Confidence 567999999999999999998876 689999999999999999999988874 7999999976521 1 1 57999
Q ss_pred EEEcccccchhhHHHHHHHHHHhcccCceEEEEecc
Q 018346 200 IYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFC 235 (357)
Q Consensus 200 Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 235 (357)
|++.... .++..+++.+.++|+|||++++....
T Consensus 152 V~~d~~~---~~~~~~l~~~~~~LkpgG~lv~~~~~ 184 (232)
T 3cbg_A 152 IFIDADK---RNYPRYYEIGLNLLRRGGLMVIDNVL 184 (232)
T ss_dssp EEECSCG---GGHHHHHHHHHHTEEEEEEEEEECTT
T ss_pred EEECCCH---HHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 9988653 46788999999999999999986553
No 193
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.51 E-value=1.2e-13 Score=129.60 Aligned_cols=111 Identities=18% Similarity=0.126 Sum_probs=92.8
Q ss_pred HHHHHHHcC-CCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccccC
Q 018346 118 LELYCERSR-LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEAS 196 (357)
Q Consensus 118 l~~l~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 196 (357)
...+++.+. ..+..+|||||||+|..+..+++.+|+.+++++|+ +.+++.|++. ++|+|+.+|+.+ +.+..
T Consensus 189 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------~~v~~~~~D~~~-~~p~~ 260 (364)
T 3p9c_A 189 TKKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF------PGVTHVGGDMFK-EVPSG 260 (364)
T ss_dssp HHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC------TTEEEEECCTTT-CCCCC
T ss_pred HHHHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc------CCeEEEeCCcCC-CCCCC
Confidence 445666665 66788999999999999999999999999999999 8887766532 489999999987 44444
Q ss_pred ccEEEEcccccchh--hHHHHHHHHHHhcccCceEEEEeccCC
Q 018346 197 YDRIYSIEMFEHMK--NYQNLLKKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 197 fD~Ii~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~ 237 (357)
|+|++..++|+++ +...+++++++.|||||++++.....+
T Consensus 261 -D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~ 302 (364)
T 3p9c_A 261 -DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILP 302 (364)
T ss_dssp -SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred -CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 9999999999884 456899999999999999999876544
No 194
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.51 E-value=3.8e-14 Score=128.85 Aligned_cols=109 Identities=12% Similarity=0.070 Sum_probs=85.1
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcC-----CCCeEEEEeccCCCcc--ccCccEE
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLE-----LQNVEIIVADISTFEM--EASYDRI 200 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~-----~~~v~~~~~d~~~~~~--~~~fD~I 200 (357)
.++.+|||||||+|.++..+++..|..+|+++|+|+.+++.|++++...+ .++++++.+|..+... .++||+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 45689999999999999999987667899999999999999999987542 2489999999887532 2689999
Q ss_pred EEcccccchhh----HHHHHHHHHHhcccCceEEEEeccC
Q 018346 201 YSIEMFEHMKN----YQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 201 i~~~~~~~~~~----~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
+++.+....+. ...+++.+.++|+|||++++...++
T Consensus 162 i~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~ 201 (294)
T 3adn_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVC 201 (294)
T ss_dssp EECC----------CCHHHHHHHHHTEEEEEEEEEEEEEC
T ss_pred EECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecCCc
Confidence 99765432221 1679999999999999999976543
No 195
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.51 E-value=2.2e-13 Score=119.09 Aligned_cols=105 Identities=14% Similarity=0.078 Sum_probs=82.3
Q ss_pred cCCCCCCEEEEECCcccHHHHHHHHHC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc----ccCccE
Q 018346 125 SRLEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----EASYDR 199 (357)
Q Consensus 125 ~~~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~----~~~fD~ 199 (357)
+.+.++.+|||+|||+|..+..+++.. |..+|+|+|+|+.+++...+.+... .|+.++.+|+..... .++||+
T Consensus 72 ~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r--~nv~~i~~Da~~~~~~~~~~~~~D~ 149 (232)
T 3id6_C 72 NPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR--PNIFPLLADARFPQSYKSVVENVDV 149 (232)
T ss_dssp CSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC--TTEEEEECCTTCGGGTTTTCCCEEE
T ss_pred cCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc--CCeEEEEcccccchhhhccccceEE
Confidence 447899999999999999999999874 5789999999999876665555443 389999999876421 268999
Q ss_pred EEEcccccchhhHHHHH-HHHHHhcccCceEEEEec
Q 018346 200 IYSIEMFEHMKNYQNLL-KKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 200 Ii~~~~~~~~~~~~~~l-~~~~~~LkpgG~l~~~~~ 234 (357)
|+++.+. ++...++ ..+.+.|||||.+++...
T Consensus 150 I~~d~a~---~~~~~il~~~~~~~LkpGG~lvisik 182 (232)
T 3id6_C 150 LYVDIAQ---PDQTDIAIYNAKFFLKVNGDMLLVIK 182 (232)
T ss_dssp EEECCCC---TTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEecCCC---hhHHHHHHHHHHHhCCCCeEEEEEEc
Confidence 9998765 4445544 556669999999999754
No 196
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.51 E-value=7.1e-14 Score=130.67 Aligned_cols=102 Identities=31% Similarity=0.411 Sum_probs=86.3
Q ss_pred CCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCccccCccEEEEccc--
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEMEASYDRIYSIEM-- 205 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~fD~Ii~~~~-- 205 (357)
++++|||||||+|.+++.+++.. ..+|+|+|.|+ +++.|+++++.+|+. +|+++.+|++++..++++|+|+|...
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aG-A~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~DvivsE~~~~ 160 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAG-ARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEWMGY 160 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT-CSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCBT
T ss_pred CCCEEEEeCCCccHHHHHHHHhC-CCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCCccccEEEeecccc
Confidence 68899999999999999888773 35899999996 789999999999984 79999999999877789999999554
Q ss_pred -ccchhhHHHHHHHHHHhcccCceEEEE
Q 018346 206 -FEHMKNYQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 206 -~~~~~~~~~~l~~~~~~LkpgG~l~~~ 232 (357)
+.+-.....++....++|||||.++-.
T Consensus 161 ~l~~e~~l~~~l~a~~r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 161 GLLHESMLSSVLHARTKWLKEGGLLLPA 188 (376)
T ss_dssp TBTTTCSHHHHHHHHHHHEEEEEEEESC
T ss_pred cccccchhhhHHHHHHhhCCCCceECCc
Confidence 333346788888889999999987643
No 197
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.51 E-value=5.1e-14 Score=123.24 Aligned_cols=104 Identities=13% Similarity=0.105 Sum_probs=88.9
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCC-CcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEEeccCCCccc-------cCcc
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEME-------ASYD 198 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~~-------~~fD 198 (357)
.++.+|||+|||+|..+..+++..| +.+|+++|+|+.+++.|++++...++ ++++++.+|+.+.... ++||
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D 147 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFD 147 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEE
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCcc
Confidence 3678999999999999999998876 68999999999999999999998887 4899999998653211 5799
Q ss_pred EEEEcccccchhhHHHHHHHHHHhcccCceEEEEec
Q 018346 199 RIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 199 ~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
+|+++.+. ..+..+++.+.++|+|||++++...
T Consensus 148 ~v~~d~~~---~~~~~~l~~~~~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 148 VAVVDADK---ENCSAYYERCLQLLRPGGILAVLRV 180 (229)
T ss_dssp EEEECSCS---TTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEEECCCH---HHHHHHHHHHHHHcCCCeEEEEECC
Confidence 99998763 4567899999999999999998653
No 198
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.51 E-value=1.1e-13 Score=128.59 Aligned_cols=113 Identities=19% Similarity=0.270 Sum_probs=90.4
Q ss_pred HHHHHHcCCCCCCEEEEECCcccHHHHHHHHH-CCCcEEEEEcCCHHHHHHHHHHHHHcC-----------CCCeEEEEe
Q 018346 119 ELYCERSRLEDGHTVLDVGCGWGSLSLYIAQK-YSNCKITGICNSKTQKEFIEEQCRVLE-----------LQNVEIIVA 186 (357)
Q Consensus 119 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~p~~~v~~vD~s~~~l~~a~~~~~~~~-----------~~~v~~~~~ 186 (357)
..++..+.+.++.+|||+|||+|.++..+++. .|..+|+++|+|+.+++.|++++...+ .++++++.+
T Consensus 95 ~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~ 174 (336)
T 2b25_A 95 NMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHK 174 (336)
T ss_dssp HHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEES
T ss_pred HHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEEC
Confidence 34555567788999999999999999999987 466899999999999999999988632 248999999
Q ss_pred ccCCCc--cc-cCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 187 DISTFE--ME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 187 d~~~~~--~~-~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
|+.+.. .+ ++||+|+++.+ ++..+++.+.++|+|||.+++..++.
T Consensus 175 d~~~~~~~~~~~~fD~V~~~~~-----~~~~~l~~~~~~LkpgG~lv~~~~~~ 222 (336)
T 2b25_A 175 DISGATEDIKSLTFDAVALDML-----NPHVTLPVFYPHLKHGGVCAVYVVNI 222 (336)
T ss_dssp CTTCCC-------EEEEEECSS-----STTTTHHHHGGGEEEEEEEEEEESSH
T ss_pred ChHHcccccCCCCeeEEEECCC-----CHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 998752 23 57999999654 33447899999999999999877643
No 199
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.50 E-value=8.1e-14 Score=125.06 Aligned_cols=99 Identities=19% Similarity=0.235 Sum_probs=84.9
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc-cCccEEEEcccc
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEMF 206 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~Ii~~~~~ 206 (357)
.++.+|||+|||+|.++..+++..|+.+|+|+|+|+.+++.|+++. .++.+..+|+.+++.. ++||+|+++.+.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~~~~~fD~v~~~~~~ 158 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY-----PQVTFCVASSHRLPFSDTSMDAIIRIYAP 158 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTSCSBCTTCEEEEEEESCC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcchhhCCCCCCceeEEEEeCCh
Confidence 4678999999999999999999877889999999999999988764 3789999999887655 789999997663
Q ss_pred cchhhHHHHHHHHHHhcccCceEEEEeccCCC
Q 018346 207 EHMKNYQNLLKKISKWMKEDTLLFVHHFCHKT 238 (357)
Q Consensus 207 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 238 (357)
..++++.++|||||.+++.++....
T Consensus 159 -------~~l~~~~~~L~pgG~l~~~~~~~~~ 183 (269)
T 1p91_A 159 -------CKAEELARVVKPGGWVITATPGPRH 183 (269)
T ss_dssp -------CCHHHHHHHEEEEEEEEEEEECTTT
T ss_pred -------hhHHHHHHhcCCCcEEEEEEcCHHH
Confidence 2478899999999999999886543
No 200
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.50 E-value=5.1e-14 Score=126.38 Aligned_cols=105 Identities=21% Similarity=0.225 Sum_probs=90.4
Q ss_pred CCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCccccCccEEEEccc
Q 018346 127 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEMEASYDRIYSIEM 205 (357)
Q Consensus 127 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~fD~Ii~~~~ 205 (357)
..+|.+|||+|||+|.+++.+++.. .++|+++|+||.+++.+++|++.+++. +++++++|..++...+.||.|+++++
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g-~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~~D~Vi~~~p 201 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYG-KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYV 201 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHT-CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCC
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhc-CCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccccCCCEEEECCC
Confidence 3578999999999999999999874 579999999999999999999999985 79999999998876688999999977
Q ss_pred ccchhhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 206 FEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 206 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
... ..++..+.++|||||++.+..+..
T Consensus 202 ~~~----~~~l~~a~~~lk~gG~ih~~~~~~ 228 (278)
T 3k6r_A 202 VRT----HEFIPKALSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp SSG----GGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred CcH----HHHHHHHHHHcCCCCEEEEEeeec
Confidence 543 346677788999999998766544
No 201
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.50 E-value=4.5e-14 Score=123.54 Aligned_cols=90 Identities=12% Similarity=0.200 Sum_probs=77.9
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccC-CCcc--ccCccEEEEcc
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADIS-TFEM--EASYDRIYSIE 204 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~-~~~~--~~~fD~Ii~~~ 204 (357)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++ .++++++++|+. .++. .++||+|+++
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~~~~~~~fD~v~~~- 118 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ--AARWAAYDFSPELLKLARAN-----APHADVYEWNGKGELPAGLGAPFGLIVSR- 118 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHH-----CTTSEEEECCSCSSCCTTCCCCEEEEEEE-
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHh-----CCCceEEEcchhhccCCcCCCCEEEEEeC-
Confidence 46789999999999999999987 78999999999999999887 238999999995 4443 3689999998
Q ss_pred cccchhhHHHHHHHHHHhcccCceEE
Q 018346 205 MFEHMKNYQNLLKKISKWMKEDTLLF 230 (357)
Q Consensus 205 ~~~~~~~~~~~l~~~~~~LkpgG~l~ 230 (357)
.+...+++++.++|||||.++
T Consensus 119 -----~~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 119 -----RGPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp -----SCCSGGGGGHHHHEEEEEEEE
T ss_pred -----CCHHHHHHHHHHHcCCCcEEE
Confidence 355678899999999999998
No 202
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.49 E-value=1.2e-13 Score=128.65 Aligned_cols=109 Identities=11% Similarity=0.059 Sum_probs=92.1
Q ss_pred CCCCCEEEEECCcccHHHHHHHHHCCC-----cEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccccCccEEE
Q 018346 127 LEDGHTVLDVGCGWGSLSLYIAQKYSN-----CKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIY 201 (357)
Q Consensus 127 ~~~~~~vLDiGcG~G~~~~~la~~~p~-----~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~Ii 201 (357)
..++.+|||+|||+|.++..+++..+. .+++|+|+++.+++.|+.++...|+ ++.+.++|.......++||+|+
T Consensus 128 ~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~-~~~i~~~D~l~~~~~~~fD~Ii 206 (344)
T 2f8l_A 128 KKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ-KMTLLHQDGLANLLVDPVDVVI 206 (344)
T ss_dssp TCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC-CCEEEESCTTSCCCCCCEEEEE
T ss_pred CCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC-CceEEECCCCCccccCCccEEE
Confidence 346789999999999999999887643 7899999999999999999988888 7899999987644347899999
Q ss_pred EcccccchhhH------------------HHHHHHHHHhcccCceEEEEeccC
Q 018346 202 SIEMFEHMKNY------------------QNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 202 ~~~~~~~~~~~------------------~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
+++++.+++.. ..++..+.+.|+|||++++..++.
T Consensus 207 ~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~ 259 (344)
T 2f8l_A 207 SDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDA 259 (344)
T ss_dssp EECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGG
T ss_pred ECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECch
Confidence 99998665221 258999999999999999988754
No 203
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.49 E-value=8e-14 Score=130.24 Aligned_cols=102 Identities=15% Similarity=0.206 Sum_probs=88.2
Q ss_pred CCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccccCccEEEEcccc
Q 018346 127 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMF 206 (357)
Q Consensus 127 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~Ii~~~~~ 206 (357)
..++.+|||||||+|..+..+++.+|+.+++++|+ +.+++.|++ .++++++.+|+.+ +.+ .||+|++..++
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~p-~~D~v~~~~~l 256 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG------SNNLTYVGGDMFT-SIP-NADAVLLKYIL 256 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------BTTEEEEECCTTT-CCC-CCSEEEEESCG
T ss_pred cccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc------CCCcEEEeccccC-CCC-CccEEEeehhh
Confidence 45678999999999999999999999999999999 998877764 1379999999976 333 49999999999
Q ss_pred cchhhHH--HHHHHHHHhccc---CceEEEEeccCC
Q 018346 207 EHMKNYQ--NLLKKISKWMKE---DTLLFVHHFCHK 237 (357)
Q Consensus 207 ~~~~~~~--~~l~~~~~~Lkp---gG~l~~~~~~~~ 237 (357)
|++++.. .+++++.++||| ||++++..+..+
T Consensus 257 h~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~ 292 (352)
T 1fp2_A 257 HNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVID 292 (352)
T ss_dssp GGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEEC
T ss_pred ccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecC
Confidence 9997766 999999999999 999999876543
No 204
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.49 E-value=1.3e-13 Score=130.18 Aligned_cols=109 Identities=18% Similarity=0.196 Sum_probs=91.1
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCC--CeEEEEeccCCCcc-----ccCccEE
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ--NVEIIVADISTFEM-----EASYDRI 200 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~--~v~~~~~d~~~~~~-----~~~fD~I 200 (357)
.++.+|||+|||+|.+++.++... ..+|+++|+|+.+++.|++|++.++++ +++|+++|+.+... ..+||+|
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g-a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~I 289 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG-AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDII 289 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT-BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEE
Confidence 467899999999999999999862 349999999999999999999999986 89999999876321 1479999
Q ss_pred EEccccc-----ch----hhHHHHHHHHHHhcccCceEEEEeccCC
Q 018346 201 YSIEMFE-----HM----KNYQNLLKKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 201 i~~~~~~-----~~----~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 237 (357)
+++++.. .. ..+.+++..+.++|+|||.+++++....
T Consensus 290 i~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~ 335 (385)
T 2b78_A 290 IIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAAN 335 (385)
T ss_dssp EECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred EECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 9998873 22 4566788889999999999999876543
No 205
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.49 E-value=1.2e-13 Score=125.17 Aligned_cols=112 Identities=14% Similarity=0.221 Sum_probs=89.6
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEEeccCCCccc
Q 018346 116 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEME 194 (357)
Q Consensus 116 ~~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~~ 194 (357)
..++.+++.+...++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++....+. ++++++++|+.+.+.+
T Consensus 15 ~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~ 92 (285)
T 1zq9_A 15 LIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEK--AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP 92 (285)
T ss_dssp HHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHH--SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhh--CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccch
Confidence 35566777788888899999999999999999998 57999999999999999998876655 4899999999886543
Q ss_pred cCccEEEEcccccchhh-HHHHHH--------------HH--HHhcccCceEE
Q 018346 195 ASYDRIYSIEMFEHMKN-YQNLLK--------------KI--SKWMKEDTLLF 230 (357)
Q Consensus 195 ~~fD~Ii~~~~~~~~~~-~~~~l~--------------~~--~~~LkpgG~l~ 230 (357)
+||+|+++.+++.... ...+++ ++ +.+|+|||.++
T Consensus 93 -~fD~vv~nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 93 -FFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp -CCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred -hhcEEEEecCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 7999999998876532 222332 22 35899999874
No 206
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.48 E-value=7.9e-14 Score=127.59 Aligned_cols=109 Identities=13% Similarity=0.041 Sum_probs=86.0
Q ss_pred CCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHc----CCCCeEEEEeccCCCcc---ccCccE
Q 018346 127 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL----ELQNVEIIVADISTFEM---EASYDR 199 (357)
Q Consensus 127 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~----~~~~v~~~~~d~~~~~~---~~~fD~ 199 (357)
..++.+|||||||+|..+..+++..+..+|+++|+|+.+++.|++++... ..++++++.+|+.+... .++||+
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDv 172 (304)
T 3bwc_A 93 HPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDV 172 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEE
T ss_pred CCCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeE
Confidence 35678999999999999999998766789999999999999999987431 22489999999877542 368999
Q ss_pred EEEcccccchhhH----HHHHHHHHHhcccCceEEEEecc
Q 018346 200 IYSIEMFEHMKNY----QNLLKKISKWMKEDTLLFVHHFC 235 (357)
Q Consensus 200 Ii~~~~~~~~~~~----~~~l~~~~~~LkpgG~l~~~~~~ 235 (357)
|+++.+....+.. ..+++.+.++|||||++++...+
T Consensus 173 Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 212 (304)
T 3bwc_A 173 VIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGES 212 (304)
T ss_dssp EEEECC---------CCHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCC
Confidence 9998776543322 68899999999999999997654
No 207
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.47 E-value=1.4e-13 Score=125.40 Aligned_cols=107 Identities=16% Similarity=0.139 Sum_probs=87.3
Q ss_pred CCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCc--c-ccCccEEEEcccc
Q 018346 130 GHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE--M-EASYDRIYSIEMF 206 (357)
Q Consensus 130 ~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~--~-~~~fD~Ii~~~~~ 206 (357)
..+|||||||+|.++..+++.+|+.+|+++|+++.+++.|++++.....++++++.+|..++. . .++||+|+++...
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~ 169 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFA 169 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCST
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCC
Confidence 349999999999999999998899999999999999999999876443358999999987642 2 2689999997543
Q ss_pred cch-h---hHHHHHHHHHHhcccCceEEEEeccC
Q 018346 207 EHM-K---NYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 207 ~~~-~---~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
+.. + ...++++.+.++|+|||++++.....
T Consensus 170 ~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~~ 203 (317)
T 3gjy_A 170 GAITPQNFTTVEFFEHCHRGLAPGGLYVANCGDH 203 (317)
T ss_dssp TSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEEC
T ss_pred ccccchhhhHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 321 1 12689999999999999999987643
No 208
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.47 E-value=1.1e-13 Score=130.66 Aligned_cols=107 Identities=16% Similarity=0.192 Sum_probs=88.7
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc--ccCccEEEEccc
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM--EASYDRIYSIEM 205 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~--~~~fD~Ii~~~~ 205 (357)
.++.+|||+|||+|.+++.++.. ++.|+++|+|+.+++.|++|+..++++ ..+.++|+.+... .+.||+|+++++
T Consensus 213 ~~g~~VLDlg~GtG~~sl~~a~~--ga~V~avDis~~al~~a~~n~~~ng~~-~~~~~~D~~~~l~~~~~~fD~Ii~dpP 289 (393)
T 4dmg_A 213 RPGERVLDVYSYVGGFALRAARK--GAYALAVDKDLEALGVLDQAALRLGLR-VDIRHGEALPTLRGLEGPFHHVLLDPP 289 (393)
T ss_dssp CTTCEEEEESCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCC-CEEEESCHHHHHHTCCCCEEEEEECCC
T ss_pred cCCCeEEEcccchhHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHhCCC-CcEEEccHHHHHHHhcCCCCEEEECCC
Confidence 35899999999999999999987 667999999999999999999999884 4677999876421 245999999988
Q ss_pred ccc---------hhhHHHHHHHHHHhcccCceEEEEeccCC
Q 018346 206 FEH---------MKNYQNLLKKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 206 ~~~---------~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 237 (357)
... ..++..++..+.++|+|||.+++.+.+..
T Consensus 290 ~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~ 330 (393)
T 4dmg_A 290 TLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYH 330 (393)
T ss_dssp CCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 622 25678899999999999999987665543
No 209
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.47 E-value=1.2e-13 Score=132.55 Aligned_cols=112 Identities=12% Similarity=0.081 Sum_probs=93.8
Q ss_pred HcCCCCCCEEEEECCcccHHHHHHHHHCCC-cEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCc--cccCccEE
Q 018346 124 RSRLEDGHTVLDVGCGWGSLSLYIAQKYSN-CKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE--MEASYDRI 200 (357)
Q Consensus 124 ~~~~~~~~~vLDiGcG~G~~~~~la~~~p~-~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~--~~~~fD~I 200 (357)
.+...++.+|||+|||+|..+..+++..++ .+|+++|+|+.+++.+++|+...|++ +.++++|+.+++ ..++||+|
T Consensus 96 ~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~~~~~~~FD~I 174 (464)
T 3m6w_A 96 LLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALAEAFGTYFHRV 174 (464)
T ss_dssp HHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHHHHHCSCEEEE
T ss_pred hcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhhhhccccCCEE
Confidence 345678899999999999999999988754 79999999999999999999999996 999999988764 23789999
Q ss_pred EEcccccch------h----------------hHHHHHHHHHHhcccCceEEEEeccC
Q 018346 201 YSIEMFEHM------K----------------NYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 201 i~~~~~~~~------~----------------~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
+++++.... + ...++++.+.++|||||+++.++.+.
T Consensus 175 l~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 175 LLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp EEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred EECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 987765221 1 13779999999999999999876654
No 210
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.47 E-value=2.7e-13 Score=131.12 Aligned_cols=112 Identities=14% Similarity=0.095 Sum_probs=93.6
Q ss_pred cCCC--CCCEEEEECCcccHHHHHHHHHCC-CcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc--ccCccE
Q 018346 125 SRLE--DGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM--EASYDR 199 (357)
Q Consensus 125 ~~~~--~~~~vLDiGcG~G~~~~~la~~~p-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~--~~~fD~ 199 (357)
+... ++.+|||+|||+|..+..+++..+ ...|+++|+|+.+++.+++++...|++++.++++|+.+++. .++||+
T Consensus 111 L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~ 190 (479)
T 2frx_A 111 LFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDA 190 (479)
T ss_dssp HTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEE
T ss_pred hCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCE
Confidence 3445 789999999999999999999864 47999999999999999999999998889999999987643 368999
Q ss_pred EEEcccccch------h----------------hHHHHHHHHHHhcccCceEEEEeccC
Q 018346 200 IYSIEMFEHM------K----------------NYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 200 Ii~~~~~~~~------~----------------~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
|+++++.... + ....+++.+.++|||||++++++.+.
T Consensus 191 Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 191 ILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTL 249 (479)
T ss_dssp EEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred EEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccC
Confidence 9997654221 1 13578999999999999999987654
No 211
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.47 E-value=3.5e-13 Score=129.92 Aligned_cols=115 Identities=16% Similarity=0.151 Sum_probs=96.2
Q ss_pred HHHcCCCCCCEEEEECCcccHHHHHHHHHCCC-cEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCc--cc-cCc
Q 018346 122 CERSRLEDGHTVLDVGCGWGSLSLYIAQKYSN-CKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE--ME-ASY 197 (357)
Q Consensus 122 ~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~-~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~--~~-~~f 197 (357)
...+...++.+|||+|||+|..+..+++..++ .+|+++|+|+.+++.+++++...|+++++++++|+.+.+ .+ ++|
T Consensus 252 ~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~f 331 (450)
T 2yxl_A 252 SIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVA 331 (450)
T ss_dssp HHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCE
T ss_pred HHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCC
Confidence 33456778899999999999999999998766 799999999999999999999999888999999998865 33 679
Q ss_pred cEEEEcccccch------hh----------------HHHHHHHHHHhcccCceEEEEeccC
Q 018346 198 DRIYSIEMFEHM------KN----------------YQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 198 D~Ii~~~~~~~~------~~----------------~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
|+|+++++.... ++ ...+++.+.++|||||.+++.+.+.
T Consensus 332 D~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 332 DKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSI 392 (450)
T ss_dssp EEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred CEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 999987654322 22 1678999999999999999887654
No 212
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.47 E-value=1.2e-13 Score=128.68 Aligned_cols=109 Identities=15% Similarity=0.241 Sum_probs=86.1
Q ss_pred HHHHHHHHcCCCCCCEEEEECCc------ccHHHHHHHHH-CCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccC
Q 018346 117 MLELYCERSRLEDGHTVLDVGCG------WGSLSLYIAQK-YSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADIS 189 (357)
Q Consensus 117 ~l~~l~~~~~~~~~~~vLDiGcG------~G~~~~~la~~-~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~ 189 (357)
.++.++..+. .++.+||||||| +|..+..+++. +|+++|+|+|+|+.+. ...++++|+++|+.
T Consensus 205 ~Ye~lL~~l~-~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---------~~~~rI~fv~GDa~ 274 (419)
T 3sso_A 205 HYDRHFRDYR-NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---------VDELRIRTIQGDQN 274 (419)
T ss_dssp HHHHHHGGGT-TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---------GCBTTEEEEECCTT
T ss_pred HHHHHHHhhc-CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---------hcCCCcEEEEeccc
Confidence 3444555443 356899999999 77777777765 5889999999999972 12248999999999
Q ss_pred CCccc-------cCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 190 TFEME-------ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 190 ~~~~~-------~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
++++. ++||+|+++.. +++.+....++++.++|||||++++.+...
T Consensus 275 dlpf~~~l~~~d~sFDlVisdgs-H~~~d~~~aL~el~rvLKPGGvlVi~Dl~t 327 (419)
T 3sso_A 275 DAEFLDRIARRYGPFDIVIDDGS-HINAHVRTSFAALFPHVRPGGLYVIEDMWT 327 (419)
T ss_dssp CHHHHHHHHHHHCCEEEEEECSC-CCHHHHHHHHHHHGGGEEEEEEEEEECGGG
T ss_pred ccchhhhhhcccCCccEEEECCc-ccchhHHHHHHHHHHhcCCCeEEEEEeccc
Confidence 86543 78999999864 667888999999999999999999987653
No 213
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.47 E-value=3e-13 Score=127.29 Aligned_cols=111 Identities=19% Similarity=0.190 Sum_probs=90.0
Q ss_pred HHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEEeccCCCccc-cCcc
Q 018346 121 YCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEME-ASYD 198 (357)
Q Consensus 121 l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~~-~~fD 198 (357)
++... ..++.+|||+|||+|.+++.++...+..+|+|+|+|+.+++.|++|+...|+ +++++.++|+.+++.+ ++||
T Consensus 210 l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD 288 (373)
T 3tm4_A 210 MIELA-ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVD 288 (373)
T ss_dssp HHHHH-TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEE
T ss_pred HHHhh-cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcC
Confidence 44444 5678899999999999999999886555999999999999999999999998 5899999999987755 7899
Q ss_pred EEEEcccccch-------h-hHHHHHHHHHHhcccCceEEEEec
Q 018346 199 RIYSIEMFEHM-------K-NYQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 199 ~Ii~~~~~~~~-------~-~~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
+|++|+++... . .+..+++.+.++| ||.+++.+.
T Consensus 289 ~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~ 330 (373)
T 3tm4_A 289 FAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT 330 (373)
T ss_dssp EEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEES
T ss_pred EEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC
Confidence 99999997532 1 2477888888888 555555444
No 214
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.47 E-value=1.1e-13 Score=130.76 Aligned_cols=106 Identities=21% Similarity=0.199 Sum_probs=92.1
Q ss_pred CCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-----ccCccEEEEc
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----EASYDRIYSI 203 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~~~fD~Ii~~ 203 (357)
++.+|||+|||+|.++..++.. ..+|+++|+|+.+++.|++|+..+++++++++++|+.+... ..+||+|+++
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~d 286 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLD 286 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEEC
Confidence 6789999999999999999987 67999999999999999999999998789999999887532 2579999999
Q ss_pred ccccc---------hhhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 204 EMFEH---------MKNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 204 ~~~~~---------~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
++... ...+..++..+.++|+|||.+++.+.+.
T Consensus 287 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 287 PPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSH 328 (382)
T ss_dssp CCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 87632 2557789999999999999999987654
No 215
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.46 E-value=9.2e-14 Score=122.50 Aligned_cols=98 Identities=16% Similarity=0.249 Sum_probs=81.3
Q ss_pred CCCEEEEECCcccHHHHHHHHH----CCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCC---cc-c-cCccE
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQK----YSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF---EM-E-ASYDR 199 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~----~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~---~~-~-~~fD~ 199 (357)
++.+|||||||+|..+..+++. .|+++|+|+|+|+.+++.|+. .. ++|+++++|+.+. +. . .+||+
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~----~~-~~v~~~~gD~~~~~~l~~~~~~~fD~ 155 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS----DM-ENITLHQGDCSDLTTFEHLREMAHPL 155 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG----GC-TTEEEEECCSSCSGGGGGGSSSCSSE
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc----cC-CceEEEECcchhHHHHHhhccCCCCE
Confidence 4679999999999999999987 578999999999999888761 12 4899999999874 32 2 36999
Q ss_pred EEEcccccchhhHHHHHHHHHH-hcccCceEEEEec
Q 018346 200 IYSIEMFEHMKNYQNLLKKISK-WMKEDTLLFVHHF 234 (357)
Q Consensus 200 Ii~~~~~~~~~~~~~~l~~~~~-~LkpgG~l~~~~~ 234 (357)
|++... | .++..++.++.+ +|||||++++...
T Consensus 156 I~~d~~--~-~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 156 IFIDNA--H-ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp EEEESS--C-SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred EEECCc--h-HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 998776 3 367889999997 9999999999754
No 216
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.46 E-value=9.6e-15 Score=129.56 Aligned_cols=114 Identities=18% Similarity=0.215 Sum_probs=89.1
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc--
Q 018346 117 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-- 194 (357)
Q Consensus 117 ~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~-- 194 (357)
.++.+++.+.+.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++.. +.++++++++|+.+.+.+
T Consensus 17 ~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~--~~~v~~id~~~~~~~~a~~~~~--~~~~v~~~~~D~~~~~~~~~ 92 (245)
T 1yub_A 17 VLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKI--SKQVTSIELDSHLFNLSSEKLK--LNTRVTLIHQDILQFQFPNK 92 (245)
T ss_dssp THHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHH--SSEEEESSSSCSSSSSSSCTTT--TCSEEEECCSCCTTTTCCCS
T ss_pred HHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHh--CCeEEEEECCHHHHHHHHHHhc--cCCceEEEECChhhcCcccC
Confidence 3455777777778899999999999999999988 5899999999999998887765 234899999999987654
Q ss_pred cCccEEEEcccccchh-hHHHH----------H----HHHHHhcccCceEEEEecc
Q 018346 195 ASYDRIYSIEMFEHMK-NYQNL----------L----KKISKWMKEDTLLFVHHFC 235 (357)
Q Consensus 195 ~~fD~Ii~~~~~~~~~-~~~~~----------l----~~~~~~LkpgG~l~~~~~~ 235 (357)
++| .|++|+++.... ....+ + +.+.++|+|||.+.+....
T Consensus 93 ~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~~~ 147 (245)
T 1yub_A 93 QRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLLHT 147 (245)
T ss_dssp SEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHTTT
T ss_pred CCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhhee
Confidence 568 788998875431 12222 2 6689999999998775543
No 217
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.46 E-value=1.5e-13 Score=131.72 Aligned_cols=113 Identities=16% Similarity=0.129 Sum_probs=94.3
Q ss_pred HcCCCCCCEEEEECCcccHHHHHHHHHCC-CcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCc--cccCccEE
Q 018346 124 RSRLEDGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE--MEASYDRI 200 (357)
Q Consensus 124 ~~~~~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~--~~~~fD~I 200 (357)
.+...++.+|||+|||+|..+..++...+ ..+|+++|+|+.+++.+++|+...|+.++.++++|..++. .+++||+|
T Consensus 100 ~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~I 179 (456)
T 3m4x_A 100 AAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRI 179 (456)
T ss_dssp HHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEE
T ss_pred HcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEE
Confidence 34567889999999999999999998764 4799999999999999999999999988999999988754 23789999
Q ss_pred EEcccccch----------------------hhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 201 YSIEMFEHM----------------------KNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 201 i~~~~~~~~----------------------~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
+++++.... .....+++.+.++|||||+++.++.+.
T Consensus 180 l~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 180 VVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTF 237 (456)
T ss_dssp EEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred EECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeec
Confidence 998874221 123478999999999999999877654
No 218
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.45 E-value=3.5e-13 Score=127.94 Aligned_cols=108 Identities=11% Similarity=0.114 Sum_probs=92.4
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCC-C-CeEEEEeccCCCcc-----ccCccEE
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-Q-NVEIIVADISTFEM-----EASYDRI 200 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~-~-~v~~~~~d~~~~~~-----~~~fD~I 200 (357)
.++.+|||+|||+|.++..++... ..+|+|+|+|+.+++.|++|+..+++ + +++++++|+.+... ..+||+|
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~I 297 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVI 297 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEE
Confidence 367899999999999999999873 45999999999999999999999998 6 89999999887532 2579999
Q ss_pred EEcccccc---------hhhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 201 YSIEMFEH---------MKNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 201 i~~~~~~~---------~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
+++++... ...+..++..+.+.|+|||++++++...
T Consensus 298 i~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 298 VMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSG 342 (396)
T ss_dssp EECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred EECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 99987632 2567889999999999999999977543
No 219
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.45 E-value=1.8e-13 Score=126.56 Aligned_cols=108 Identities=16% Similarity=0.164 Sum_probs=87.2
Q ss_pred CCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHc--CC--CCeEEEEeccCCCc--c-ccCccE
Q 018346 127 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL--EL--QNVEIIVADISTFE--M-EASYDR 199 (357)
Q Consensus 127 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~--~~--~~v~~~~~d~~~~~--~-~~~fD~ 199 (357)
..++.+|||||||+|.++..+++..|..+|+++|+|+.+++.|++++... ++ ++++++.+|+.+.. . .++||+
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDl 197 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDA 197 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEE
T ss_pred CCCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccE
Confidence 45678999999999999999998766789999999999999999998753 33 48999999987642 1 268999
Q ss_pred EEEcccc--cchhh--HHHHHHHHHHhcccCceEEEEec
Q 018346 200 IYSIEMF--EHMKN--YQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 200 Ii~~~~~--~~~~~--~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
|+++... +.... ...+++.+.++|+|||++++...
T Consensus 198 Ii~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 236 (334)
T 1xj5_A 198 VIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAE 236 (334)
T ss_dssp EEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 9997652 21121 47899999999999999999643
No 220
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.44 E-value=2e-13 Score=129.54 Aligned_cols=109 Identities=17% Similarity=0.146 Sum_probs=92.4
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCcc-----ccCccEEE
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEM-----EASYDRIY 201 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~~-----~~~fD~Ii 201 (357)
.++.+|||+|||+|.++..++.. +..+|+|+|+|+.+++.|++++..++++ +++++++|+.+... .++||+|+
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi 294 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVV 294 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred hCCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEE
Confidence 36789999999999999999986 2459999999999999999999999986 89999999877532 25799999
Q ss_pred Ecccccc---------hhhHHHHHHHHHHhcccCceEEEEeccCC
Q 018346 202 SIEMFEH---------MKNYQNLLKKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 202 ~~~~~~~---------~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 237 (357)
++++... ..++..++..+.++|+|||.+++.+.+..
T Consensus 295 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 339 (396)
T 2as0_A 295 LDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQH 339 (396)
T ss_dssp ECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTT
T ss_pred ECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCC
Confidence 9987633 25678899999999999999988776543
No 221
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.44 E-value=1.9e-13 Score=119.47 Aligned_cols=111 Identities=12% Similarity=0.121 Sum_probs=94.1
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccccC
Q 018346 117 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEAS 196 (357)
Q Consensus 117 ~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 196 (357)
++..++..+ .++.+|||||||+|-++..++...|..+|+++|+++.+++.+++++..+|+ +.++...|....+++++
T Consensus 122 fY~~i~~~i--~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~-~~~~~v~D~~~~~p~~~ 198 (281)
T 3lcv_B 122 FYRELFRHL--PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNV-PHRTNVADLLEDRLDEP 198 (281)
T ss_dssp HHHHHGGGS--CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTC-CEEEEECCTTTSCCCSC
T ss_pred HHHHHHhcc--CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCC-CceEEEeeecccCCCCC
Confidence 344455444 457799999999999999999887899999999999999999999999998 68999999987666688
Q ss_pred ccEEEEcccccchhhHH--HHHHHHHHhcccCceEEE
Q 018346 197 YDRIYSIEMFEHMKNYQ--NLLKKISKWMKEDTLLFV 231 (357)
Q Consensus 197 fD~Ii~~~~~~~~~~~~--~~l~~~~~~LkpgG~l~~ 231 (357)
||+|+++-+++++++.. ..+ ++.+.|+|+|+++-
T Consensus 199 ~DvaL~lkti~~Le~q~kg~g~-~ll~aL~~~~vvVS 234 (281)
T 3lcv_B 199 ADVTLLLKTLPCLETQQRGSGW-EVIDIVNSPNIVVT 234 (281)
T ss_dssp CSEEEETTCHHHHHHHSTTHHH-HHHHHSSCSEEEEE
T ss_pred cchHHHHHHHHHhhhhhhHHHH-HHHHHhCCCCEEEe
Confidence 99999999999995542 355 89999999998654
No 222
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.44 E-value=2.8e-12 Score=110.28 Aligned_cols=99 Identities=18% Similarity=0.185 Sum_probs=83.3
Q ss_pred CCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccccCccEEEEccc
Q 018346 126 RLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEM 205 (357)
Q Consensus 126 ~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~Ii~~~~ 205 (357)
...++.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.+++++...++ +++++++|+.+++ ++||+|+++++
T Consensus 46 ~~~~~~~vlD~g~G~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~--~~~D~v~~~~p 121 (207)
T 1wy7_A 46 GDIEGKVVADLGAGTGVLSYGALLLG-AKEVICVEVDKEAVDVLIENLGEFKG-KFKVFIGDVSEFN--SRVDIVIMNPP 121 (207)
T ss_dssp TSSTTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHTGGGTT-SEEEEESCGGGCC--CCCSEEEECCC
T ss_pred CCCCcCEEEEeeCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHcCC-CEEEEECchHHcC--CCCCEEEEcCC
Confidence 44568899999999999999999873 35899999999999999999988887 8999999998864 58999999999
Q ss_pred ccchh--hHHHHHHHHHHhcccCceEE
Q 018346 206 FEHMK--NYQNLLKKISKWMKEDTLLF 230 (357)
Q Consensus 206 ~~~~~--~~~~~l~~~~~~LkpgG~l~ 230 (357)
++... ....+++.+.+++ ||.++
T Consensus 122 ~~~~~~~~~~~~l~~~~~~l--~~~~~ 146 (207)
T 1wy7_A 122 FGSQRKHADRPFLLKAFEIS--DVVYS 146 (207)
T ss_dssp CSSSSTTTTHHHHHHHHHHC--SEEEE
T ss_pred CccccCCchHHHHHHHHHhc--CcEEE
Confidence 87762 3457888888888 55433
No 223
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.44 E-value=7.6e-13 Score=120.72 Aligned_cols=109 Identities=15% Similarity=0.213 Sum_probs=83.9
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccccC
Q 018346 117 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEAS 196 (357)
Q Consensus 117 ~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 196 (357)
.++.+++.+.+.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++...+.++++++.+|+.+.+. .+
T Consensus 30 i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~--~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~-~~ 106 (299)
T 2h1r_A 30 ILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL--AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVF-PK 106 (299)
T ss_dssp HHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCC-CC
T ss_pred HHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCc-cc
Confidence 4556667777778899999999999999999977 67999999999999999999987777789999999988754 48
Q ss_pred ccEEEEcccccchh-hHHHHH---------------HHHHHhcccCce
Q 018346 197 YDRIYSIEMFEHMK-NYQNLL---------------KKISKWMKEDTL 228 (357)
Q Consensus 197 fD~Ii~~~~~~~~~-~~~~~l---------------~~~~~~LkpgG~ 228 (357)
||+|+++.+++... ....++ +.+.++++|+|.
T Consensus 107 ~D~Vv~n~py~~~~~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G~ 154 (299)
T 2h1r_A 107 FDVCTANIPYKISSPLIFKLISHRPLFKCAVLMFQKEFAERMLANVGD 154 (299)
T ss_dssp CSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHTCCTTS
T ss_pred CCEEEEcCCcccccHHHHHHHhcCCccceeeehHHHHHHHHHhcCCCC
Confidence 99999999887552 223333 335567777663
No 224
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.43 E-value=1.1e-12 Score=123.88 Aligned_cols=121 Identities=14% Similarity=0.139 Sum_probs=97.4
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCC--------------------------------------cEEEE
Q 018346 117 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSN--------------------------------------CKITG 158 (357)
Q Consensus 117 ~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~--------------------------------------~~v~~ 158 (357)
+...++...+..++..|||.+||+|.+++.++....+ .+|+|
T Consensus 189 lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~G 268 (393)
T 3k0b_A 189 MAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIG 268 (393)
T ss_dssp HHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEE
T ss_pred HHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEE
Confidence 4455677777788899999999999999998865322 46999
Q ss_pred EcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCccccCccEEEEcccccch----hhHHHHHHHHHHhccc--CceEEE
Q 018346 159 ICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEMEASYDRIYSIEMFEHM----KNYQNLLKKISKWMKE--DTLLFV 231 (357)
Q Consensus 159 vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~fD~Ii~~~~~~~~----~~~~~~l~~~~~~Lkp--gG~l~~ 231 (357)
+|+|+.+++.|++|+...|++ ++++.++|+.+++.+.+||+|++|+++..- .+...+.+.+.+.||+ ||.+++
T Consensus 269 vDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~i 348 (393)
T 3k0b_A 269 GDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTEDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYV 348 (393)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCCCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCCCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEE
Confidence 999999999999999999985 699999999987666789999999998432 3455566666666665 999888
Q ss_pred EeccCC
Q 018346 232 HHFCHK 237 (357)
Q Consensus 232 ~~~~~~ 237 (357)
.+....
T Consensus 349 it~~~~ 354 (393)
T 3k0b_A 349 LTSYEL 354 (393)
T ss_dssp EECCTT
T ss_pred EECCHH
Confidence 776543
No 225
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.43 E-value=9.1e-13 Score=124.22 Aligned_cols=120 Identities=16% Similarity=0.218 Sum_probs=97.8
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCC--------------------------------------cEEEE
Q 018346 117 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSN--------------------------------------CKITG 158 (357)
Q Consensus 117 ~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~--------------------------------------~~v~~ 158 (357)
+...++...+..++.+|||+|||+|.+++.++....+ .+|+|
T Consensus 183 lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~G 262 (385)
T 3ldu_A 183 LAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYG 262 (385)
T ss_dssp HHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEE
T ss_pred HHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEE
Confidence 4445667777778899999999999999998876321 57999
Q ss_pred EcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCccccCccEEEEcccccch----hhHHHHHHHHHHhccc--CceEEE
Q 018346 159 ICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEMEASYDRIYSIEMFEHM----KNYQNLLKKISKWMKE--DTLLFV 231 (357)
Q Consensus 159 vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~fD~Ii~~~~~~~~----~~~~~~l~~~~~~Lkp--gG~l~~ 231 (357)
+|+|+.+++.|++|+...|++ +|+|.++|+.+++.+.+||+|++|+++..- .+...+++.+.+.||+ ||.+++
T Consensus 263 vDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~i 342 (385)
T 3ldu_A 263 YDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSEDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYL 342 (385)
T ss_dssp EESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCSCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcCCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEE
Confidence 999999999999999999985 799999999987666789999999998532 3456677777777776 888888
Q ss_pred EeccC
Q 018346 232 HHFCH 236 (357)
Q Consensus 232 ~~~~~ 236 (357)
.+...
T Consensus 343 it~~~ 347 (385)
T 3ldu_A 343 ITSYE 347 (385)
T ss_dssp EESCT
T ss_pred EECCH
Confidence 77644
No 226
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.43 E-value=4.5e-13 Score=128.40 Aligned_cols=114 Identities=12% Similarity=0.110 Sum_probs=95.3
Q ss_pred HHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCc--cc-cCcc
Q 018346 122 CERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE--ME-ASYD 198 (357)
Q Consensus 122 ~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~--~~-~~fD 198 (357)
...+...++.+|||+|||+|..+..+++..++.+|+++|+|+.+++.+++++...|+ ++.++++|+.+.+ .+ ++||
T Consensus 239 ~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~-~~~~~~~D~~~~~~~~~~~~fD 317 (429)
T 1sqg_A 239 MTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM-KATVKQGDGRYPSQWCGEQQFD 317 (429)
T ss_dssp HHHHCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC-CCEEEECCTTCTHHHHTTCCEE
T ss_pred HHHcCCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC-CeEEEeCchhhchhhcccCCCC
Confidence 344566788999999999999999999998778999999999999999999999888 6899999998865 23 5799
Q ss_pred EEEEcccccch------hh----------------HHHHHHHHHHhcccCceEEEEeccC
Q 018346 199 RIYSIEMFEHM------KN----------------YQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 199 ~Ii~~~~~~~~------~~----------------~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
+|+++++.... ++ ...+++.+.++|||||++++++.+.
T Consensus 318 ~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 318 RILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp EEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCC
T ss_pred EEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 99997765322 22 2578999999999999999987544
No 227
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.43 E-value=1.7e-13 Score=126.26 Aligned_cols=108 Identities=20% Similarity=0.155 Sum_probs=86.6
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHH--cCC--CCeEEEEeccCCCc--cccCccEEE
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRV--LEL--QNVEIIVADISTFE--MEASYDRIY 201 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~--~~~--~~v~~~~~d~~~~~--~~~~fD~Ii 201 (357)
.++.+|||||||+|.++..+++..|..+|+++|+|+.+++.|++++.. .+. ++++++.+|+.+.. .+++||+|+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 356899999999999999999876678999999999999999998765 222 48999999987632 136899999
Q ss_pred Ecccccc--hhhH--HHHHHHHHHhcccCceEEEEecc
Q 018346 202 SIEMFEH--MKNY--QNLLKKISKWMKEDTLLFVHHFC 235 (357)
Q Consensus 202 ~~~~~~~--~~~~--~~~l~~~~~~LkpgG~l~~~~~~ 235 (357)
++..-.. .... ..+++.+.++|+|||++++...+
T Consensus 195 ~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 195 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp EECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 9864211 1111 78999999999999999997654
No 228
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.43 E-value=1e-12 Score=112.54 Aligned_cols=96 Identities=20% Similarity=0.214 Sum_probs=76.0
Q ss_pred CCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccccCccEEEEccc
Q 018346 126 RLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEM 205 (357)
Q Consensus 126 ~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~Ii~~~~ 205 (357)
...++.+|||+|||+|.++..++.. +..+|+|+|+|+.+++.|++++. +++++++|+.+++ ++||+|+++++
T Consensus 48 ~~~~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~-----~~~~~~~d~~~~~--~~~D~v~~~~p 119 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCG-----GVNFMVADVSEIS--GKYDTWIMNPP 119 (200)
T ss_dssp TSSBTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCT-----TSEEEECCGGGCC--CCEEEEEECCC
T ss_pred CCCCCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcC-----CCEEEECcHHHCC--CCeeEEEECCC
Confidence 4457789999999999999999987 34589999999999999998864 6899999998864 68999999999
Q ss_pred ccchhh--HHHHHHHHHHhcccCceEEEE
Q 018346 206 FEHMKN--YQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 206 ~~~~~~--~~~~l~~~~~~LkpgG~l~~~ 232 (357)
+++... ...+++.+.+.+ |+ +++.
T Consensus 120 ~~~~~~~~~~~~l~~~~~~~--g~-~~~~ 145 (200)
T 1ne2_A 120 FGSVVKHSDRAFIDKAFETS--MW-IYSI 145 (200)
T ss_dssp C-------CHHHHHHHHHHE--EE-EEEE
T ss_pred chhccCchhHHHHHHHHHhc--Cc-EEEE
Confidence 998843 346888888887 44 4443
No 229
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.43 E-value=1.6e-12 Score=122.22 Aligned_cols=121 Identities=16% Similarity=0.132 Sum_probs=98.8
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCC--------------------------------------cEEEE
Q 018346 117 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSN--------------------------------------CKITG 158 (357)
Q Consensus 117 ~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~--------------------------------------~~v~~ 158 (357)
+...++...+..++..|||.+||+|.+++.++....+ .+|+|
T Consensus 182 LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~G 261 (384)
T 3ldg_A 182 MAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISG 261 (384)
T ss_dssp HHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEE
T ss_pred HHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEE
Confidence 4445667777788899999999999999998865322 46999
Q ss_pred EcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCccccCccEEEEcccccch----hhHHHHHHHHHHhccc--CceEEE
Q 018346 159 ICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEMEASYDRIYSIEMFEHM----KNYQNLLKKISKWMKE--DTLLFV 231 (357)
Q Consensus 159 vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~fD~Ii~~~~~~~~----~~~~~~l~~~~~~Lkp--gG~l~~ 231 (357)
+|+|+.+++.|++|+...|+. ++++.++|+.+++.+.+||+|++|+++..- .+...+++.+.+.||+ ||.+++
T Consensus 262 vDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~i 341 (384)
T 3ldg_A 262 FDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFI 341 (384)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCCCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCccCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEE
Confidence 999999999999999999985 699999999987665789999999998532 4566777777777776 999988
Q ss_pred EeccCC
Q 018346 232 HHFCHK 237 (357)
Q Consensus 232 ~~~~~~ 237 (357)
.++...
T Consensus 342 it~~~~ 347 (384)
T 3ldg_A 342 LTNDTD 347 (384)
T ss_dssp EESCTT
T ss_pred EECCHH
Confidence 877543
No 230
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.43 E-value=2.3e-13 Score=124.01 Aligned_cols=108 Identities=15% Similarity=0.033 Sum_probs=84.7
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHH--cC--CCCeEEEEeccCCC-cc-ccCccEEE
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRV--LE--LQNVEIIVADISTF-EM-EASYDRIY 201 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~--~~--~~~v~~~~~d~~~~-~~-~~~fD~Ii 201 (357)
.++.+|||||||+|..+..+++..|..+|+++|+|+.+++.|++++.. .+ .++++++.+|+.+. +. .++||+|+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 356899999999999999999876678999999999999999998864 22 24899999998663 21 26799999
Q ss_pred Ecccccchh-----hHHHHHHHHHHhcccCceEEEEecc
Q 018346 202 SIEMFEHMK-----NYQNLLKKISKWMKEDTLLFVHHFC 235 (357)
Q Consensus 202 ~~~~~~~~~-----~~~~~l~~~~~~LkpgG~l~~~~~~ 235 (357)
++.+..+.. ....+++.+.++|+|||++++...+
T Consensus 169 ~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 207 (296)
T 1inl_A 169 IDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETED 207 (296)
T ss_dssp EEC----------CCSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred EcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccC
Confidence 976532121 2368899999999999999997543
No 231
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.43 E-value=2.4e-13 Score=123.04 Aligned_cols=109 Identities=20% Similarity=0.127 Sum_probs=87.8
Q ss_pred CCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcC----CCCeEEEEeccCCCcc--ccCccEE
Q 018346 127 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLE----LQNVEIIVADISTFEM--EASYDRI 200 (357)
Q Consensus 127 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~----~~~v~~~~~d~~~~~~--~~~fD~I 200 (357)
..++.+|||||||+|..+..+++..|..+|+++|+|+.+++.|++++...+ .++++++.+|+.+... .++||+|
T Consensus 76 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (283)
T 2i7c_A 76 SKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVI 155 (283)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred CCCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEE
Confidence 446789999999999999999987667899999999999999999876432 2489999999876421 3689999
Q ss_pred EEcccccchh--hH--HHHHHHHHHhcccCceEEEEecc
Q 018346 201 YSIEMFEHMK--NY--QNLLKKISKWMKEDTLLFVHHFC 235 (357)
Q Consensus 201 i~~~~~~~~~--~~--~~~l~~~~~~LkpgG~l~~~~~~ 235 (357)
+++.+....+ .. ..+++.+.++|+|||++++...+
T Consensus 156 i~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 194 (283)
T 2i7c_A 156 IVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 194 (283)
T ss_dssp EEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred EEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCC
Confidence 9976543221 22 68999999999999999987553
No 232
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.42 E-value=2.6e-13 Score=122.28 Aligned_cols=108 Identities=22% Similarity=0.126 Sum_probs=86.9
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHc--CC--CCeEEEEeccCCCc-c-ccCccEEE
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL--EL--QNVEIIVADISTFE-M-EASYDRIY 201 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~--~~--~~v~~~~~d~~~~~-~-~~~fD~Ii 201 (357)
.++.+|||||||+|.++..+++..|..+|+++|+++.+++.|++++... +. ++++++.+|..+.. . .++||+|+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 3568999999999999999997756689999999999999999987542 22 48999999987632 1 36899999
Q ss_pred Ecccccchh----hHHHHHHHHHHhcccCceEEEEecc
Q 018346 202 SIEMFEHMK----NYQNLLKKISKWMKEDTLLFVHHFC 235 (357)
Q Consensus 202 ~~~~~~~~~----~~~~~l~~~~~~LkpgG~l~~~~~~ 235 (357)
++.+....+ ...++++.+.++|+|||++++...+
T Consensus 154 ~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~ 191 (275)
T 1iy9_A 154 VDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDN 191 (275)
T ss_dssp ESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCC
T ss_pred ECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 987653221 1367999999999999999997643
No 233
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.42 E-value=4.6e-13 Score=125.40 Aligned_cols=102 Identities=17% Similarity=0.220 Sum_probs=87.3
Q ss_pred CCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccccCccEEEEcccc
Q 018346 127 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMF 206 (357)
Q Consensus 127 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~Ii~~~~~ 206 (357)
..++.+|||||||+|..+..+++.+|+.+++++|+ +.+++.+++ .++++++.+|+.+ +.+ +||+|+++.++
T Consensus 191 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~~-~~D~v~~~~vl 261 (358)
T 1zg3_A 191 FEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG------NENLNFVGGDMFK-SIP-SADAVLLKWVL 261 (358)
T ss_dssp HHTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC------CSSEEEEECCTTT-CCC-CCSEEEEESCG
T ss_pred ccCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc------CCCcEEEeCccCC-CCC-CceEEEEcccc
Confidence 34668999999999999999999999999999999 787766653 2479999999987 443 59999999999
Q ss_pred cchhhHH--HHHHHHHHhccc---CceEEEEeccCC
Q 018346 207 EHMKNYQ--NLLKKISKWMKE---DTLLFVHHFCHK 237 (357)
Q Consensus 207 ~~~~~~~--~~l~~~~~~Lkp---gG~l~~~~~~~~ 237 (357)
|++++.. .+++++.++|+| ||++++..+..+
T Consensus 262 h~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~ 297 (358)
T 1zg3_A 262 HDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISID 297 (358)
T ss_dssp GGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEEC
T ss_pred cCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccC
Confidence 9997766 999999999999 999999776543
No 234
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.42 E-value=2e-12 Score=123.37 Aligned_cols=108 Identities=18% Similarity=0.350 Sum_probs=88.2
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcccc
Q 018346 116 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEA 195 (357)
Q Consensus 116 ~~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 195 (357)
.++..+.+ ..++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++|+..++++ ++|+.+|+.+... .
T Consensus 280 ~l~~~~~~---~~~~~~VLDlgcG~G~~sl~la~~--~~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~~-~ 352 (425)
T 2jjq_A 280 NLVRKVSE---LVEGEKILDMYSGVGTFGIYLAKR--GFNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVSV-K 352 (425)
T ss_dssp HHHHHHHH---HCCSSEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCCC-T
T ss_pred HHHHHhhc---cCCCCEEEEeeccchHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcCc-c
Confidence 34444444 356789999999999999999987 679999999999999999999999886 9999999998653 3
Q ss_pred CccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEe
Q 018346 196 SYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 196 ~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
+||+|+++++..... ..+++.+. .|+|||.+++++
T Consensus 353 ~fD~Vv~dPPr~g~~--~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 353 GFDTVIVDPPRAGLH--PRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp TCSEEEECCCTTCSC--HHHHHHHH-HHCCSEEEEEES
T ss_pred CCCEEEEcCCccchH--HHHHHHHH-hcCCCcEEEEEC
Confidence 899999999875543 33555554 489999999875
No 235
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.42 E-value=4.3e-13 Score=135.60 Aligned_cols=106 Identities=17% Similarity=0.170 Sum_probs=91.2
Q ss_pred CCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCC--CeEEEEeccCCCc-c-ccCccEEEEcc
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ--NVEIIVADISTFE-M-EASYDRIYSIE 204 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~--~v~~~~~d~~~~~-~-~~~fD~Ii~~~ 204 (357)
++.+|||+|||+|.+++.++... ..+|+++|+|+.+++.|++|+..++++ +++++++|+.+.. . .++||+|++++
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~g-a~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DP 617 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGG-ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDP 617 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECC
T ss_pred CCCcEEEeeechhHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECC
Confidence 68899999999999999999753 347999999999999999999999985 7999999998742 2 26899999998
Q ss_pred cc-----------cchhhHHHHHHHHHHhcccCceEEEEecc
Q 018346 205 MF-----------EHMKNYQNLLKKISKWMKEDTLLFVHHFC 235 (357)
Q Consensus 205 ~~-----------~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 235 (357)
+. ....++..++..+.++|+|||++++++..
T Consensus 618 P~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 618 PTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp CSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 64 33467889999999999999999987765
No 236
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.42 E-value=2.7e-13 Score=123.91 Aligned_cols=109 Identities=15% Similarity=0.109 Sum_probs=85.8
Q ss_pred CCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHH--cCC--CCeEEEEeccCCC-cc-ccCccEE
Q 018346 127 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRV--LEL--QNVEIIVADISTF-EM-EASYDRI 200 (357)
Q Consensus 127 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~--~~~--~~v~~~~~d~~~~-~~-~~~fD~I 200 (357)
..++.+|||||||+|..+..+++..|..+|+++|+|+.+++.|++++.. .++ ++++++.+|..+. +. .++||+|
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~I 172 (304)
T 2o07_A 93 HPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVI 172 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEE
Confidence 3567899999999999999999876678999999999999999998865 232 4899999998763 21 3689999
Q ss_pred EEcccccchh----hHHHHHHHHHHhcccCceEEEEecc
Q 018346 201 YSIEMFEHMK----NYQNLLKKISKWMKEDTLLFVHHFC 235 (357)
Q Consensus 201 i~~~~~~~~~----~~~~~l~~~~~~LkpgG~l~~~~~~ 235 (357)
+++.+.+..+ ....+++.+.++|+|||++++...+
T Consensus 173 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 173 ITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGEC 211 (304)
T ss_dssp EEECC-----------CHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCC
Confidence 9987643221 2357899999999999999997644
No 237
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.42 E-value=5.4e-13 Score=123.76 Aligned_cols=101 Identities=15% Similarity=0.186 Sum_probs=88.3
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEEeccCCCccccCccEEEEcccc
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEMEASYDRIYSIEMF 206 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~fD~Ii~~~~~ 206 (357)
.++.+|||+|||+|.+++. ++ ++.+|+++|+|+.+++.|++|+..+++ ++++++++|+.+.. ++||+|+++++.
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~--~~fD~Vi~dpP~ 268 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD--VKGNRVIMNLPK 268 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC--CCEEEEEECCTT
T ss_pred CCCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc--CCCcEEEECCcH
Confidence 4788999999999999999 76 378999999999999999999999998 48999999998865 789999999775
Q ss_pred cchhhHHHHHHHHHHhcccCceEEEEeccCC
Q 018346 207 EHMKNYQNLLKKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 207 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 237 (357)
.. ..+++.+.++|+|||.+++.+....
T Consensus 269 ~~----~~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 269 FA----HKFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp TG----GGGHHHHHHHEEEEEEEEEEEEESS
T ss_pred hH----HHHHHHHHHHcCCCCEEEEEEeecC
Confidence 43 3678889999999999999777654
No 238
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.42 E-value=8e-13 Score=112.58 Aligned_cols=108 Identities=19% Similarity=0.292 Sum_probs=82.6
Q ss_pred HHHHHHHHcC-CCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc--
Q 018346 117 MLELYCERSR-LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-- 193 (357)
Q Consensus 117 ~l~~l~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-- 193 (357)
.+..+.+... +.++.+|||+|||+|.++..+++. +.+|+|+|+++.. ..++++++++|+.+...
T Consensus 12 KL~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~~-----------~~~~v~~~~~D~~~~~~~~ 78 (191)
T 3dou_A 12 KLEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEME-----------EIAGVRFIRCDIFKETIFD 78 (191)
T ss_dssp HHHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCCC-----------CCTTCEEEECCTTSSSHHH
T ss_pred HHHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc--CCcEEEEeccccc-----------cCCCeEEEEccccCHHHHH
Confidence 3444555544 367899999999999999999987 7899999999852 23489999999987541
Q ss_pred ------c----cCccEEEEcccccch-----------hhHHHHHHHHHHhcccCceEEEEeccCC
Q 018346 194 ------E----ASYDRIYSIEMFEHM-----------KNYQNLLKKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 194 ------~----~~fD~Ii~~~~~~~~-----------~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 237 (357)
. ++||+|+|+.+.... .....+++.+.++|||||.+++.++...
T Consensus 79 ~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~ 143 (191)
T 3dou_A 79 DIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGD 143 (191)
T ss_dssp HHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECST
T ss_pred HHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCC
Confidence 1 389999998643211 2245778889999999999999887544
No 239
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.41 E-value=2.5e-13 Score=124.76 Aligned_cols=108 Identities=11% Similarity=0.019 Sum_probs=88.3
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHH--cC---CCCeEEEEeccCCCc-c-ccCccEE
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRV--LE---LQNVEIIVADISTFE-M-EASYDRI 200 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~--~~---~~~v~~~~~d~~~~~-~-~~~fD~I 200 (357)
.++.+|||||||+|..+..+++..|..+|+++|+|+.+++.|++++.. .+ .++++++.+|+.+.. . .++||+|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 456899999999999999999876678999999999999999998865 22 248999999987642 1 3689999
Q ss_pred EEcccccc---hh--h--HHHHHHHHHHhcccCceEEEEecc
Q 018346 201 YSIEMFEH---MK--N--YQNLLKKISKWMKEDTLLFVHHFC 235 (357)
Q Consensus 201 i~~~~~~~---~~--~--~~~~l~~~~~~LkpgG~l~~~~~~ 235 (357)
+++.+.+. -+ . ...+++.+.++|+|||++++...+
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 197 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGM 197 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccC
Confidence 99877654 11 1 478999999999999999997543
No 240
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.40 E-value=1.3e-12 Score=111.34 Aligned_cols=99 Identities=19% Similarity=0.172 Sum_probs=77.8
Q ss_pred CCCCCEEEEECCcccHHHHHHHHHCCC---------cEEEEEcCCHHHHHHHHHHHHHcCCCCeEEE-EeccCCCc----
Q 018346 127 LEDGHTVLDVGCGWGSLSLYIAQKYSN---------CKITGICNSKTQKEFIEEQCRVLELQNVEII-VADISTFE---- 192 (357)
Q Consensus 127 ~~~~~~vLDiGcG~G~~~~~la~~~p~---------~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~-~~d~~~~~---- 192 (357)
+.++.+|||+|||+|.++..+++..+. .+|+|+|+|+.+ ..++++++ .+|+....
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~~~~~~~~~~d~~~~~~~~~ 88 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PLEGATFLCPADVTDPRTSQR 88 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CCTTCEEECSCCTTSHHHHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cCCCCeEEEeccCCCHHHHHH
Confidence 467899999999999999999998754 799999999842 23478899 89987642
Q ss_pred ----cc-cCccEEEEcccccc----hhhH-------HHHHHHHHHhcccCceEEEEeccC
Q 018346 193 ----ME-ASYDRIYSIEMFEH----MKNY-------QNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 193 ----~~-~~fD~Ii~~~~~~~----~~~~-------~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
.+ ++||+|+++.+++. ..+. ..+++++.++|||||.+++.++..
T Consensus 89 ~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 148 (196)
T 2nyu_A 89 ILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAG 148 (196)
T ss_dssp HHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred HHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 12 57999999775543 2222 578999999999999999987644
No 241
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.40 E-value=2.7e-13 Score=124.27 Aligned_cols=106 Identities=17% Similarity=0.137 Sum_probs=82.9
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHc--CC--CCeEEEEeccCCCc--cccCccEEE
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL--EL--QNVEIIVADISTFE--MEASYDRIY 201 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~--~~--~~v~~~~~d~~~~~--~~~~fD~Ii 201 (357)
.++.+|||||||+|..+..+++..|..+|+++|+|+.+++.|++++... ++ ++++++.+|+.+.. ..++||+|+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 3568999999999999999998767789999999999999999988643 22 48999999987632 136899999
Q ss_pred Ecccccchhh---H-HHHHHHHHHhcccCceEEEEe
Q 018346 202 SIEMFEHMKN---Y-QNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 202 ~~~~~~~~~~---~-~~~l~~~~~~LkpgG~l~~~~ 233 (357)
++...+..+. + ..+++.+.++|+|||++++..
T Consensus 187 ~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 187 TDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp ECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred EcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 9774322111 1 688999999999999999975
No 242
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.40 E-value=4.9e-13 Score=120.95 Aligned_cols=106 Identities=9% Similarity=0.039 Sum_probs=85.0
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHc--C---------CCCeEEEEeccCCCcc-cc
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL--E---------LQNVEIIVADISTFEM-EA 195 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~--~---------~~~v~~~~~d~~~~~~-~~ 195 (357)
.++.+|||||||+|..+..+++. |..+|+++|+|+.+++.|++++ .. + .++++++.+|+.+... .+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~ 151 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNR 151 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcccC
Confidence 45689999999999999999987 7789999999999999999987 33 2 2489999999865321 36
Q ss_pred CccEEEEcccccchh--h--HHHHHHHHHHhcccCceEEEEecc
Q 018346 196 SYDRIYSIEMFEHMK--N--YQNLLKKISKWMKEDTLLFVHHFC 235 (357)
Q Consensus 196 ~fD~Ii~~~~~~~~~--~--~~~~l~~~~~~LkpgG~l~~~~~~ 235 (357)
+||+|+++.+.+..+ . ...+++.+.++|+|||++++...+
T Consensus 152 ~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 195 (281)
T 1mjf_A 152 GFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGS 195 (281)
T ss_dssp CEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 799999987643211 1 367899999999999999997543
No 243
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.38 E-value=4.5e-13 Score=116.00 Aligned_cols=87 Identities=21% Similarity=0.237 Sum_probs=75.2
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc-cCccEEEEcccc
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEMF 206 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~Ii~~~~~ 206 (357)
.++.+|||+|||+|.++..++ .+|+|+|+|+. ++.++.+|+.+++.+ ++||+|+++.++
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~---------------~~~~~~~d~~~~~~~~~~fD~v~~~~~l 125 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR-----NPVHCFDLASL---------------DPRVTVCDMAQVPLEDESVDVAVFCLSL 125 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC-----SCEEEEESSCS---------------STTEEESCTTSCSCCTTCEEEEEEESCC
T ss_pred CCCCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC---------------CceEEEeccccCCCCCCCEeEEEEehhc
Confidence 467899999999999988763 68999999987 467889999887654 689999999999
Q ss_pred cchhhHHHHHHHHHHhcccCceEEEEecc
Q 018346 207 EHMKNYQNLLKKISKWMKEDTLLFVHHFC 235 (357)
Q Consensus 207 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 235 (357)
++ ++...+++++.++|+|||.+++..+.
T Consensus 126 ~~-~~~~~~l~~~~~~L~~gG~l~i~~~~ 153 (215)
T 2zfu_A 126 MG-TNIRDFLEEANRVLKPGGLLKVAEVS 153 (215)
T ss_dssp CS-SCHHHHHHHHHHHEEEEEEEEEEECG
T ss_pred cc-cCHHHHHHHHHHhCCCCeEEEEEEcC
Confidence 75 78999999999999999999997654
No 244
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.37 E-value=8.2e-13 Score=127.20 Aligned_cols=120 Identities=17% Similarity=0.135 Sum_probs=97.4
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHC-------------CCcEEEEEcCCHHHHHHHHHHHHHcCCC--Ce
Q 018346 117 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKY-------------SNCKITGICNSKTQKEFIEEQCRVLELQ--NV 181 (357)
Q Consensus 117 ~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~-------------p~~~v~~vD~s~~~l~~a~~~~~~~~~~--~v 181 (357)
..+.+++.+...++.+|||.|||+|.++..+++.. +..+++|+|+++.+++.|+.++...|+. ++
T Consensus 159 v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~ 238 (445)
T 2okc_A 159 LIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRS 238 (445)
T ss_dssp HHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCC
T ss_pred HHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCC
Confidence 34445555566678899999999999999888653 2468999999999999999999888874 67
Q ss_pred EEEEeccCCCccccCccEEEEcccccchhh-----------------HHHHHHHHHHhcccCceEEEEeccC
Q 018346 182 EIIVADISTFEMEASYDRIYSIEMFEHMKN-----------------YQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 182 ~~~~~d~~~~~~~~~fD~Ii~~~~~~~~~~-----------------~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
.+.++|....+...+||+|++|+|+..... ...+++.+.+.|||||++++..++.
T Consensus 239 ~i~~gD~l~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~~ 310 (445)
T 2okc_A 239 PIVCEDSLEKEPSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPDN 310 (445)
T ss_dssp SEEECCTTTSCCSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHH
T ss_pred CEeeCCCCCCcccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECCc
Confidence 889999887654468999999999876421 2378999999999999999988753
No 245
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.37 E-value=2.2e-12 Score=111.80 Aligned_cols=102 Identities=15% Similarity=0.186 Sum_probs=85.5
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccccCccEEEEccccc
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMFE 207 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~Ii~~~~~~ 207 (357)
.++.+|||||||+|.++..+. |..+|+|+|+|+.+++.+++++...+. +..+..+|....+++++||+|++.-+++
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~g~-~~~~~v~D~~~~~~~~~~DvvLllk~lh 179 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREKDW-DFTFALQDVLCAPPAEAGDLALIFKLLP 179 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHTTC-EEEEEECCTTTSCCCCBCSEEEEESCHH
T ss_pred CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhcCC-CceEEEeecccCCCCCCcchHHHHHHHH
Confidence 467899999999999999877 689999999999999999999988886 8999999998877678999999999998
Q ss_pred chhhH-HHHHHHHHHhcccCceEEEEec
Q 018346 208 HMKNY-QNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 208 ~~~~~-~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
++++. +...-++.+.|+++|++ ++.|
T Consensus 180 ~LE~q~~~~~~~ll~aL~~~~vv-VsfP 206 (253)
T 3frh_A 180 LLEREQAGSAMALLQSLNTPRMA-VSFP 206 (253)
T ss_dssp HHHHHSTTHHHHHHHHCBCSEEE-EEEE
T ss_pred HhhhhchhhHHHHHHHhcCCCEE-EEcC
Confidence 88432 22333777899999765 4444
No 246
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.37 E-value=1.2e-12 Score=125.06 Aligned_cols=111 Identities=16% Similarity=0.242 Sum_probs=89.0
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcccc
Q 018346 117 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEA 195 (357)
Q Consensus 117 ~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 195 (357)
..+.+++.+...++.+|||+|||+|.++..+++.. +..+++|+|+++.+++.| .+++++++|+.+....+
T Consensus 27 l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---------~~~~~~~~D~~~~~~~~ 97 (421)
T 2ih2_A 27 VVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---------PWAEGILADFLLWEPGE 97 (421)
T ss_dssp HHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------TTEEEEESCGGGCCCSS
T ss_pred HHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------CCCcEEeCChhhcCccC
Confidence 34455666655556799999999999999999875 578999999999988766 37899999998865447
Q ss_pred CccEEEEcccccchh-----------h------------------HHHHHHHHHHhcccCceEEEEeccC
Q 018346 196 SYDRIYSIEMFEHMK-----------N------------------YQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 196 ~fD~Ii~~~~~~~~~-----------~------------------~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
+||+|++|+++.... . ...+++.+.++|+|||.+++..+..
T Consensus 98 ~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~ 167 (421)
T 2ih2_A 98 AFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPAT 167 (421)
T ss_dssp CEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGG
T ss_pred CCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChH
Confidence 899999999884321 1 1256889999999999999988864
No 247
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.35 E-value=1.1e-12 Score=118.08 Aligned_cols=107 Identities=13% Similarity=0.060 Sum_probs=79.4
Q ss_pred HHHHHHHHcCCC-CCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEE-EeccCCCcc-
Q 018346 117 MLELYCERSRLE-DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEII-VADISTFEM- 193 (357)
Q Consensus 117 ~l~~l~~~~~~~-~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~-~~d~~~~~~- 193 (357)
.+..+++...+. ++.+|||+|||+|.++..+++. +..+|+|+|+|+.|++.+.++. +++... ..|+..+..
T Consensus 72 Kl~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDvs~~mL~~a~r~~-----~rv~~~~~~ni~~l~~~ 145 (291)
T 3hp7_A 72 KLEKALAVFNLSVEDMITIDIGASTGGFTDVMLQN-GAKLVYAVDVGTNQLVWKLRQD-----DRVRSMEQYNFRYAEPV 145 (291)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSSSCSCHHHHTC-----TTEEEECSCCGGGCCGG
T ss_pred HHHHHHHhcCCCccccEEEecCCCccHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhC-----cccceecccCceecchh
Confidence 444566666664 5779999999999999999887 2469999999999998754421 133322 234433321
Q ss_pred --c-cCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEE
Q 018346 194 --E-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 194 --~-~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 232 (357)
+ .+||+|+++.+++++ ..++.++.++|+|||.+++.
T Consensus 146 ~l~~~~fD~v~~d~sf~sl---~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 146 DFTEGLPSFASIDVSFISL---NLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp GCTTCCCSEEEECCSSSCG---GGTHHHHHHHSCTTCEEEEE
T ss_pred hCCCCCCCEEEEEeeHhhH---HHHHHHHHHHcCcCCEEEEE
Confidence 2 349999999888765 67899999999999999886
No 248
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.35 E-value=3.7e-13 Score=121.11 Aligned_cols=113 Identities=25% Similarity=0.287 Sum_probs=81.1
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHH-HcCCC-CeEEE--EeccCCCc
Q 018346 117 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCR-VLELQ-NVEII--VADISTFE 192 (357)
Q Consensus 117 ~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~-~~~~~-~v~~~--~~d~~~~~ 192 (357)
.+..+.+...+.++.+|||+|||+|.++..+++. .+|+|+|+|+ ++..++++.. ..... ++.++ ++|+.+++
T Consensus 70 KL~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~ 145 (276)
T 2wa2_A 70 KLAWIDERGGVELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME 145 (276)
T ss_dssp HHHHHHHTTSCCCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC
T ss_pred HHHHHHHcCCCCCCCEEEEeccCCCHHHHHHHHc---CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC
Confidence 3455555545567899999999999999999876 5899999998 4332222100 00111 78999 89998865
Q ss_pred cccCccEEEEcccccchh-----hH--HHHHHHHHHhcccCc--eEEEEecc
Q 018346 193 MEASYDRIYSIEMFEHMK-----NY--QNLLKKISKWMKEDT--LLFVHHFC 235 (357)
Q Consensus 193 ~~~~fD~Ii~~~~~~~~~-----~~--~~~l~~~~~~LkpgG--~l~~~~~~ 235 (357)
+++||+|+|+.+ +... .. ..+++.+.++||||| .+++.++.
T Consensus 146 -~~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 146 -PFQADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp -CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred -CCCcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 478999999876 3321 11 137899999999999 99987776
No 249
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.34 E-value=4.5e-13 Score=119.91 Aligned_cols=111 Identities=23% Similarity=0.271 Sum_probs=80.4
Q ss_pred HHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHH---HHcCCCCeEEE--EeccCCCc
Q 018346 118 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQC---RVLELQNVEII--VADISTFE 192 (357)
Q Consensus 118 l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~---~~~~~~~v~~~--~~d~~~~~ 192 (357)
+..+.+...+.++.+|||+|||+|.++..+++. .+|+|+|+|+ ++..++++. ...+. ++.++ ++|+.+++
T Consensus 63 L~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~-m~~~a~~~~~~~~~~~~-~v~~~~~~~D~~~l~ 137 (265)
T 2oxt_A 63 LAWMEERGYVELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYT-LGVGGHEVPRITESYGW-NIVKFKSRVDIHTLP 137 (265)
T ss_dssp HHHHHHHTSCCCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEEC-CCCSSCCCCCCCCBTTG-GGEEEECSCCTTTSC
T ss_pred HHHHHHcCCCCCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECch-hhhhhhhhhhhhhccCC-CeEEEecccCHhHCC
Confidence 445555555567899999999999999999876 5899999998 432221110 00111 68999 89998875
Q ss_pred cccCccEEEEcccccchhh-----H--HHHHHHHHHhcccCc--eEEEEecc
Q 018346 193 MEASYDRIYSIEMFEHMKN-----Y--QNLLKKISKWMKEDT--LLFVHHFC 235 (357)
Q Consensus 193 ~~~~fD~Ii~~~~~~~~~~-----~--~~~l~~~~~~LkpgG--~l~~~~~~ 235 (357)
+++||+|+|+.+ ++..+ . ..+++.+.++||||| .+++.++.
T Consensus 138 -~~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 138 -VERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp -CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred -CCCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 478999999876 33211 1 137899999999999 99997776
No 250
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.33 E-value=5.8e-13 Score=111.66 Aligned_cols=90 Identities=16% Similarity=0.109 Sum_probs=78.0
Q ss_pred cCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc---c-cCccEE
Q 018346 125 SRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM---E-ASYDRI 200 (357)
Q Consensus 125 ~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~---~-~~fD~I 200 (357)
+++.++.+|||+|||. +++|+|+.|++.|+++... ++++.++|+.+++. + ++||+|
T Consensus 8 ~g~~~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~~----~~~~~~~d~~~~~~~~~~~~~fD~V 67 (176)
T 2ld4_A 8 FGISAGQFVAVVWDKS----------------SPVEALKGLVDKLQALTGN----EGRVSVENIKQLLQSAHKESSFDII 67 (176)
T ss_dssp TTCCTTSEEEEEECTT----------------SCHHHHHHHHHHHHHHTTT----TSEEEEEEGGGGGGGCCCSSCEEEE
T ss_pred cCCCCCCEEEEecCCc----------------eeeeCCHHHHHHHHHhccc----CcEEEEechhcCccccCCCCCEeEE
Confidence 4567899999999996 2399999999999887532 58999999998765 3 789999
Q ss_pred EEcccccch-hhHHHHHHHHHHhcccCceEEEEec
Q 018346 201 YSIEMFEHM-KNYQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 201 i~~~~~~~~-~~~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
+++.+++|+ ++...+++++.++|||||++++..+
T Consensus 68 ~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 102 (176)
T 2ld4_A 68 LSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEP 102 (176)
T ss_dssp EECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EECChhhhcccCHHHHHHHHHHHCCCCEEEEEEcc
Confidence 999999999 8999999999999999999999544
No 251
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.33 E-value=2.4e-11 Score=110.03 Aligned_cols=90 Identities=19% Similarity=0.301 Sum_probs=78.0
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc-
Q 018346 116 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME- 194 (357)
Q Consensus 116 ~~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~- 194 (357)
..++.+++.+.+.++.+|||||||+|.++..+++. +.+|+++|+|+.+++.+++++.. .++++++++|+.+.+++
T Consensus 37 ~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~--~~~V~aVEid~~li~~a~~~~~~--~~~v~vi~gD~l~~~~~~ 112 (295)
T 3gru_A 37 NFVNKAVESANLTKDDVVLEIGLGKGILTEELAKN--AKKVYVIEIDKSLEPYANKLKEL--YNNIEIIWGDALKVDLNK 112 (295)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCGGGHHHHHHHHHH--CSSEEEEESCTTTSCGGG
T ss_pred HHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHhcc--CCCeEEEECchhhCCccc
Confidence 35667788888888999999999999999999998 68999999999999999998873 34899999999987665
Q ss_pred cCccEEEEcccccch
Q 018346 195 ASYDRIYSIEMFEHM 209 (357)
Q Consensus 195 ~~fD~Ii~~~~~~~~ 209 (357)
.+||+|++|.+++..
T Consensus 113 ~~fD~Iv~NlPy~is 127 (295)
T 3gru_A 113 LDFNKVVANLPYQIS 127 (295)
T ss_dssp SCCSEEEEECCGGGH
T ss_pred CCccEEEEeCccccc
Confidence 579999999888643
No 252
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.32 E-value=4.1e-12 Score=119.32 Aligned_cols=112 Identities=16% Similarity=0.158 Sum_probs=88.5
Q ss_pred HHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-
Q 018346 115 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM- 193 (357)
Q Consensus 115 ~~~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~- 193 (357)
..++..+++.+... +.+|||+|||+|.+++.+++. ..+|+|+|+|+.+++.|++|++.+++++++|+.+|+.+...
T Consensus 200 ~~l~~~~~~~~~~~-~~~vLDl~cG~G~~~l~la~~--~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~ 276 (369)
T 3bt7_A 200 IQMLEWALDVTKGS-KGDLLELYCGNGNFSLALARN--FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQA 276 (369)
T ss_dssp HHHHHHHHHHTTTC-CSEEEEESCTTSHHHHHHGGG--SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHH
T ss_pred HHHHHHHHHHhhcC-CCEEEEccCCCCHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHH
Confidence 44566666766544 578999999999999999875 56999999999999999999999998899999999876421
Q ss_pred -c---------------cCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEecc
Q 018346 194 -E---------------ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFC 235 (357)
Q Consensus 194 -~---------------~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 235 (357)
. .+||+|+++++...+ ...+.+.|+|+|.+++.+.+
T Consensus 277 ~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~g~------~~~~~~~l~~~g~ivyvsc~ 328 (369)
T 3bt7_A 277 MNGVREFNRLQGIDLKSYQCETIFVDPPRSGL------DSETEKMVQAYPRILYISCN 328 (369)
T ss_dssp HSSCCCCTTGGGSCGGGCCEEEEEECCCTTCC------CHHHHHHHTTSSEEEEEESC
T ss_pred HhhccccccccccccccCCCCEEEECcCcccc------HHHHHHHHhCCCEEEEEECC
Confidence 1 279999999987543 23455666788887776544
No 253
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.32 E-value=1.1e-11 Score=111.81 Aligned_cols=97 Identities=14% Similarity=0.101 Sum_probs=75.5
Q ss_pred cCCCCCCEEEEECCcc------cHHHHHHHHHCC-CcEEEEEcCCHHHHHHHHHHHHHcCCCCeEE-EEeccCCCccccC
Q 018346 125 SRLEDGHTVLDVGCGW------GSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQNVEI-IVADISTFEMEAS 196 (357)
Q Consensus 125 ~~~~~~~~vLDiGcG~------G~~~~~la~~~p-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~-~~~d~~~~~~~~~ 196 (357)
+.+.++.+|||+|||+ |. ..+++..| +.+|+|+|+|+. ++++++ +++|+.+.++.++
T Consensus 59 l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v~~v~~~i~gD~~~~~~~~~ 123 (290)
T 2xyq_A 59 LAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------VSDADSTLIGDCATVHTANK 123 (290)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------BCSSSEEEESCGGGCCCSSC
T ss_pred cCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------CCCCEEEEECccccCCccCc
Confidence 3567889999999955 66 45566665 689999999997 137888 9999988765578
Q ss_pred ccEEEEcccccc-----------hhhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 197 YDRIYSIEMFEH-----------MKNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 197 fD~Ii~~~~~~~-----------~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
||+|+|+...+. ......+++.+.++|||||.+++..+..
T Consensus 124 fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~ 174 (290)
T 2xyq_A 124 WDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEH 174 (290)
T ss_dssp EEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSS
T ss_pred ccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 999999854321 2235689999999999999999977654
No 254
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.31 E-value=2.1e-12 Score=115.45 Aligned_cols=99 Identities=12% Similarity=0.003 Sum_probs=82.0
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHH----cCCCCeEEEEeccCCCccccCccEEEEc
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRV----LELQNVEIIVADISTFEMEASYDRIYSI 203 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~----~~~~~v~~~~~d~~~~~~~~~fD~Ii~~ 203 (357)
..+.+|||||||+|..+..+++. + .+|+++|+++.+++.|++++.. ...++++++.+|..+.. ++||+|++.
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~--~~fD~Ii~d 146 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI--KKYDLIFCL 146 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC--CCEEEEEES
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH--hhCCEEEEC
Confidence 45689999999999999999987 6 8999999999999999887532 12248999999998765 789999997
Q ss_pred ccccchhhHHHHHHHHHHhcccCceEEEEecc
Q 018346 204 EMFEHMKNYQNLLKKISKWMKEDTLLFVHHFC 235 (357)
Q Consensus 204 ~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 235 (357)
.. ++..+++.+.+.|+|||++++...+
T Consensus 147 ~~-----dp~~~~~~~~~~L~pgG~lv~~~~~ 173 (262)
T 2cmg_A 147 QE-----PDIHRIDGLKRMLKEDGVFISVAKH 173 (262)
T ss_dssp SC-----CCHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CC-----ChHHHHHHHHHhcCCCcEEEEEcCC
Confidence 42 3345899999999999999986543
No 255
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.31 E-value=3.8e-13 Score=118.10 Aligned_cols=109 Identities=17% Similarity=0.100 Sum_probs=73.9
Q ss_pred HHHHHHHHcCCC-CCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcC---CCCeEEEE-eccCCC
Q 018346 117 MLELYCERSRLE-DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLE---LQNVEIIV-ADISTF 191 (357)
Q Consensus 117 ~l~~l~~~~~~~-~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~---~~~v~~~~-~d~~~~ 191 (357)
.+..+++.+.+. ++.+|||||||+|.++..+++.. ..+|+|+|+|+.|++.++++..... ..++.+.. .|+..
T Consensus 24 kL~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g-~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~- 101 (232)
T 3opn_A 24 KLEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNG-AKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQ- 101 (232)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTT-CSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCS-
T ss_pred HHHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcC-CCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCc-
Confidence 344555655554 46799999999999999999872 3599999999999998776533211 01222222 11111
Q ss_pred ccccCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEe
Q 018346 192 EMEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 192 ~~~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
..||.+.+..++..+ ..+++++.++|||||.+++..
T Consensus 102 ---~~~d~~~~D~v~~~l---~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 102 ---GRPSFTSIDVSFISL---DLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp ---CCCSEEEECCSSSCG---GGTHHHHHHHSCTTCEEEEEE
T ss_pred ---CCCCEEEEEEEhhhH---HHHHHHHHHhccCCCEEEEEE
Confidence 125655555555544 678999999999999999854
No 256
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.30 E-value=7.9e-12 Score=117.35 Aligned_cols=101 Identities=14% Similarity=0.015 Sum_probs=86.3
Q ss_pred CCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHc---------------CCCCeEEEEeccCCCcc
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL---------------ELQNVEIIVADISTFEM 193 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~---------------~~~~v~~~~~d~~~~~~ 193 (357)
++.+|||+|||+|..++.+++..++.+|+++|+|+.+++.+++|++.+ ++++++++++|+.++..
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 578999999999999999999877789999999999999999999998 77569999999877532
Q ss_pred --ccCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEe
Q 018346 194 --EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 194 --~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
.++||+|+++++. ....+++.+.+.|+|||.+++..
T Consensus 127 ~~~~~fD~I~lDP~~----~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 127 ERHRYFHFIDLDPFG----SPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HSTTCEEEEEECCSS----CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCCCEEEeCCCC----CHHHHHHHHHHhcCCCCEEEEEe
Confidence 2579999987642 23578888999999999888865
No 257
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.29 E-value=2e-11 Score=107.97 Aligned_cols=88 Identities=19% Similarity=0.316 Sum_probs=72.9
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc-
Q 018346 116 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME- 194 (357)
Q Consensus 116 ~~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~- 194 (357)
..++.+++.+++.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++.... ++++++++|+.+++++
T Consensus 17 ~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~--~~v~~~~~D~~~~~~~~ 92 (244)
T 1qam_A 17 HNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQR--CNFVTAIEIDHKLCKTTENKLVDH--DNFQVLNKDILQFKFPK 92 (244)
T ss_dssp HHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHTTTC--CSEEEECCCGGGCCCCS
T ss_pred HHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHc--CCeEEEEECCHHHHHHHHHhhccC--CCeEEEEChHHhCCccc
Confidence 35566777777778899999999999999999998 589999999999999999887542 4899999999887654
Q ss_pred -cCccEEEEcccccc
Q 018346 195 -ASYDRIYSIEMFEH 208 (357)
Q Consensus 195 -~~fD~Ii~~~~~~~ 208 (357)
..| .|++|.+++.
T Consensus 93 ~~~~-~vv~nlPy~~ 106 (244)
T 1qam_A 93 NQSY-KIFGNIPYNI 106 (244)
T ss_dssp SCCC-EEEEECCGGG
T ss_pred CCCe-EEEEeCCccc
Confidence 234 6888888753
No 258
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.29 E-value=1.4e-12 Score=119.00 Aligned_cols=113 Identities=18% Similarity=0.264 Sum_probs=79.9
Q ss_pred HHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcC----CHHHHHHHHHHHHHcCCCCeEEEEe-ccCCCc
Q 018346 118 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICN----SKTQKEFIEEQCRVLELQNVEIIVA-DISTFE 192 (357)
Q Consensus 118 l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~----s~~~l~~a~~~~~~~~~~~v~~~~~-d~~~~~ 192 (357)
+..+.+...+.++.+|||+|||+|.++..+++. .+|+|+|+ ++.+++.+. ....+.++|.++++ |+..++
T Consensus 71 L~~i~~~~~~~~g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~D~~~l~ 145 (305)
T 2p41_A 71 LRWFVERNLVTPEGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHEEPIP--MSTYGWNLVRLQSGVDVFFIP 145 (305)
T ss_dssp HHHHHHTTSSCCCEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSCCCCC--CCSTTGGGEEEECSCCTTTSC
T ss_pred HHHHHHcCCCCCCCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHHHHHH--hhhcCCCCeEEEeccccccCC
Confidence 334455433467889999999999999999976 47999999 554432111 11112247999999 888764
Q ss_pred cccCccEEEEccccc---chhhHH---HHHHHHHHhcccCceEEEEeccC
Q 018346 193 MEASYDRIYSIEMFE---HMKNYQ---NLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 193 ~~~~fD~Ii~~~~~~---~~~~~~---~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
.++||+|+|+.+.+ +..+.. .++..+.++|||||.+++.++..
T Consensus 146 -~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 146 -PERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp -CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred -cCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 36899999987653 222222 57888999999999999877655
No 259
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.29 E-value=2.9e-11 Score=110.43 Aligned_cols=112 Identities=12% Similarity=-0.031 Sum_probs=88.3
Q ss_pred HcCCCCCCEEEEECCcccHHHHHHHHHC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc----cCcc
Q 018346 124 RSRLEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME----ASYD 198 (357)
Q Consensus 124 ~~~~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~----~~fD 198 (357)
.+...++.+|||+|||+|..+..+++.. +..+|+++|+++.+++.++++++..|+++++++.+|+.++... .+||
T Consensus 97 ~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD 176 (309)
T 2b9e_A 97 LLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVH 176 (309)
T ss_dssp HHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEE
T ss_pred HhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCC
Confidence 3456788999999999999999999875 4579999999999999999999999988999999998876432 4799
Q ss_pred EEEEcccccch------hh------------------HHHHHHHHHHhcccCceEEEEeccC
Q 018346 199 RIYSIEMFEHM------KN------------------YQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 199 ~Ii~~~~~~~~------~~------------------~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
.|+++++.... ++ ..++++.+.++|+ ||+++.++.+.
T Consensus 177 ~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~ 237 (309)
T 2b9e_A 177 YILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSL 237 (309)
T ss_dssp EEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCC
T ss_pred EEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCC
Confidence 99997654221 01 1346777777776 99888766543
No 260
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.26 E-value=8.5e-12 Score=117.23 Aligned_cols=102 Identities=16% Similarity=0.078 Sum_probs=86.4
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCC-cEEEEEcCCHHHHHHHHHHHHHcCCCC--eEEEEeccCCCcc---ccCccEEE
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSN-CKITGICNSKTQKEFIEEQCRVLELQN--VEIIVADISTFEM---EASYDRIY 201 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~-~~v~~vD~s~~~l~~a~~~~~~~~~~~--v~~~~~d~~~~~~---~~~fD~Ii 201 (357)
.++.+|||++||+|.+++.++.+.++ .+|+++|+|+.+++.+++|++.+++++ ++++.+|+.+... .++||+|+
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~ 130 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVD 130 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEE
Confidence 35789999999999999999987545 589999999999999999999999864 9999999876432 25799999
Q ss_pred EcccccchhhHHHHHHHHHHhcccCceEEEEe
Q 018346 202 SIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 202 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
+++ +. ....+++.+.+.|+|||+++++.
T Consensus 131 lDP-~g---~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 131 LDP-FG---TPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp ECC-SS---CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECC-Cc---CHHHHHHHHHHHhCCCCEEEEEe
Confidence 998 22 23568889999999999888876
No 261
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.23 E-value=4.6e-11 Score=106.93 Aligned_cols=87 Identities=20% Similarity=0.243 Sum_probs=75.0
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc--
Q 018346 117 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-- 194 (357)
Q Consensus 117 ~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~-- 194 (357)
.++.+++.+++.++ +|||||||+|.++..+++. +.+|+++|+|+.+++.+++++.. ++++++++|+.+++.+
T Consensus 35 i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~--~~~V~avEid~~~~~~l~~~~~~---~~v~vi~~D~l~~~~~~~ 108 (271)
T 3fut_A 35 HLRRIVEAARPFTG-PVFEVGPGLGALTRALLEA--GAEVTAIEKDLRLRPVLEETLSG---LPVRLVFQDALLYPWEEV 108 (271)
T ss_dssp HHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHT--TCCEEEEESCGGGHHHHHHHTTT---SSEEEEESCGGGSCGGGS
T ss_pred HHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHc--CCEEEEEECCHHHHHHHHHhcCC---CCEEEEECChhhCChhhc
Confidence 55667788888888 9999999999999999988 57999999999999999988752 3899999999987655
Q ss_pred cCccEEEEcccccch
Q 018346 195 ASYDRIYSIEMFEHM 209 (357)
Q Consensus 195 ~~fD~Ii~~~~~~~~ 209 (357)
..+|.|++|.+++--
T Consensus 109 ~~~~~iv~NlPy~is 123 (271)
T 3fut_A 109 PQGSLLVANLPYHIA 123 (271)
T ss_dssp CTTEEEEEEECSSCC
T ss_pred cCccEEEecCccccc
Confidence 368999999998654
No 262
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.20 E-value=2.9e-11 Score=109.90 Aligned_cols=89 Identities=20% Similarity=0.228 Sum_probs=75.7
Q ss_pred HHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc--c-
Q 018346 118 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM--E- 194 (357)
Q Consensus 118 l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~--~- 194 (357)
++.+++.+.+.++.+|||+|||+|.++..+++.+|+.+|+|+|+|+.+++.|++++...+ ++++++++|+.+++. .
T Consensus 15 l~e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g-~~v~~v~~d~~~l~~~l~~ 93 (301)
T 1m6y_A 15 VREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS-DRVSLFKVSYREADFLLKT 93 (301)
T ss_dssp HHHHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT-TTEEEEECCGGGHHHHHHH
T ss_pred HHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEECCHHHHHHHHHh
Confidence 344566667778899999999999999999999887899999999999999999998877 599999999987641 1
Q ss_pred ---cCccEEEEccccc
Q 018346 195 ---ASYDRIYSIEMFE 207 (357)
Q Consensus 195 ---~~fD~Ii~~~~~~ 207 (357)
.+||.|+++.++.
T Consensus 94 ~g~~~~D~Vl~D~gvS 109 (301)
T 1m6y_A 94 LGIEKVDGILMDLGVS 109 (301)
T ss_dssp TTCSCEEEEEEECSCC
T ss_pred cCCCCCCEEEEcCccc
Confidence 4799999987653
No 263
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.19 E-value=5e-11 Score=105.87 Aligned_cols=86 Identities=14% Similarity=0.267 Sum_probs=73.4
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc--
Q 018346 117 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-- 194 (357)
Q Consensus 117 ~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~-- 194 (357)
.++.+++.+++.++.+|||||||+|.++..+++. +.+|+++|+|+.+++.+++++.. .++++++++|+.+++++
T Consensus 17 i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~--~~~V~avEid~~~~~~~~~~~~~--~~~v~~i~~D~~~~~~~~~ 92 (255)
T 3tqs_A 17 VLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTE--CDNLALVEIDRDLVAFLQKKYNQ--QKNITIYQNDALQFDFSSV 92 (255)
T ss_dssp HHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTT--SSEEEEEECCHHHHHHHHHHHTT--CTTEEEEESCTTTCCGGGS
T ss_pred HHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHhh--CCCcEEEEcchHhCCHHHh
Confidence 5566777788888999999999999999999987 57999999999999999998765 34899999999987653
Q ss_pred ---cCccEEEEccccc
Q 018346 195 ---ASYDRIYSIEMFE 207 (357)
Q Consensus 195 ---~~fD~Ii~~~~~~ 207 (357)
++|| |++|.+++
T Consensus 93 ~~~~~~~-vv~NlPY~ 107 (255)
T 3tqs_A 93 KTDKPLR-VVGNLPYN 107 (255)
T ss_dssp CCSSCEE-EEEECCHH
T ss_pred ccCCCeE-EEecCCcc
Confidence 3577 88998874
No 264
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.19 E-value=1.3e-10 Score=117.44 Aligned_cols=121 Identities=16% Similarity=0.136 Sum_probs=93.6
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHC------------------------------------------CCc
Q 018346 117 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKY------------------------------------------SNC 154 (357)
Q Consensus 117 ~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~------------------------------------------p~~ 154 (357)
+...++...+..++..|||.+||+|.+++.++... +..
T Consensus 178 LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~ 257 (703)
T 3v97_A 178 LAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSS 257 (703)
T ss_dssp HHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCc
Confidence 44456667777788899999999999999887642 125
Q ss_pred EEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCccc---cCccEEEEcccccch----hhHHHHHHHHH---Hhc
Q 018346 155 KITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEME---ASYDRIYSIEMFEHM----KNYQNLLKKIS---KWM 223 (357)
Q Consensus 155 ~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~~~---~~fD~Ii~~~~~~~~----~~~~~~l~~~~---~~L 223 (357)
+++|+|+++.+++.|++|+...|++ .++|.++|+.++..+ ++||+|++|+|+..- .+...+.+.+. +.+
T Consensus 258 ~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~ 337 (703)
T 3v97_A 258 HFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQ 337 (703)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHH
T ss_pred cEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhh
Confidence 8999999999999999999999986 599999999886433 289999999998532 23444444444 445
Q ss_pred ccCceEEEEeccCC
Q 018346 224 KEDTLLFVHHFCHK 237 (357)
Q Consensus 224 kpgG~l~~~~~~~~ 237 (357)
.|||.+++.++...
T Consensus 338 ~~g~~~~ilt~~~~ 351 (703)
T 3v97_A 338 FGGWNLSLFSASPD 351 (703)
T ss_dssp CTTCEEEEEESCHH
T ss_pred CCCCeEEEEeCCHH
Confidence 58999999877543
No 265
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.17 E-value=3.6e-11 Score=110.78 Aligned_cols=108 Identities=18% Similarity=0.145 Sum_probs=81.8
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcC---C-----CCeEEEEeccCCCcc-----c
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLE---L-----QNVEIIVADISTFEM-----E 194 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~---~-----~~v~~~~~d~~~~~~-----~ 194 (357)
.++.+||+||||+|..+..+++.. ..+|+++|+++.+++.|++++...+ + ++++++.+|..+... .
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~-~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~ 265 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLK-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 265 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTC-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCCEEEEEECChhHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccC
Confidence 357899999999999999998775 4799999999999999999875321 1 169999999887532 2
Q ss_pred cCccEEEEcccc---cchh---hHHHHHHHH----HHhcccCceEEEEeccC
Q 018346 195 ASYDRIYSIEMF---EHMK---NYQNLLKKI----SKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 195 ~~fD~Ii~~~~~---~~~~---~~~~~l~~~----~~~LkpgG~l~~~~~~~ 236 (357)
++||+|++..+- ...+ ...++++.+ .++|+|||++++...+.
T Consensus 266 ~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~ 317 (364)
T 2qfm_A 266 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCV 317 (364)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEET
T ss_pred CCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCc
Confidence 679999998743 1111 223444554 99999999999976544
No 266
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.16 E-value=3e-11 Score=118.70 Aligned_cols=118 Identities=8% Similarity=0.005 Sum_probs=93.8
Q ss_pred HHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCC------------------CcEEEEEcCCHHHHHHHHHHHHHcCCCC
Q 018346 119 ELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYS------------------NCKITGICNSKTQKEFIEEQCRVLELQN 180 (357)
Q Consensus 119 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p------------------~~~v~~vD~s~~~l~~a~~~~~~~~~~~ 180 (357)
..+++.+...++.+|||.|||+|.++..+++... ...++|+|+++.++..|+.++...|+++
T Consensus 159 ~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~ 238 (541)
T 2ar0_A 159 KTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEG 238 (541)
T ss_dssp HHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCC
T ss_pred HHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCc
Confidence 3455555666788999999999999988876531 2379999999999999999998888754
Q ss_pred -----eEEEEeccCCCcc--ccCccEEEEcccccchhh--------------HHHHHHHHHHhcccCceEEEEeccC
Q 018346 181 -----VEIIVADISTFEM--EASYDRIYSIEMFEHMKN--------------YQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 181 -----v~~~~~d~~~~~~--~~~fD~Ii~~~~~~~~~~--------------~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
+.+.++|....+. ..+||+|++|+|+..... ...++..+.+.|+|||++.+..+..
T Consensus 239 ~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~~ 315 (541)
T 2ar0_A 239 NLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDN 315 (541)
T ss_dssp BGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHH
T ss_pred cccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecCc
Confidence 7889999876432 267999999999865421 2368999999999999999987754
No 267
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.12 E-value=9.1e-11 Score=104.47 Aligned_cols=81 Identities=14% Similarity=0.108 Sum_probs=67.3
Q ss_pred CCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCH-------HHHHHHHHHHHHcCCC-CeEEEEeccCCCc--cc-
Q 018346 126 RLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSK-------TQKEFIEEQCRVLELQ-NVEIIVADISTFE--ME- 194 (357)
Q Consensus 126 ~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~-------~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~--~~- 194 (357)
...++.+|||+|||+|..++.++.. +++|+++|+|+ .+++.|++++..+++. +++++++|+.+.. .+
T Consensus 80 ~~~~~~~VLDlgcG~G~~a~~lA~~--g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~ 157 (258)
T 2r6z_A 80 NHTAHPTVWDATAGLGRDSFVLASL--GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVK 157 (258)
T ss_dssp TGGGCCCEEETTCTTCHHHHHHHHT--TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHH
T ss_pred CcCCcCeEEEeeCccCHHHHHHHHh--CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhc
Confidence 3446789999999999999999986 67999999999 9999999988877664 5999999998742 22
Q ss_pred --cCccEEEEcccccc
Q 018346 195 --ASYDRIYSIEMFEH 208 (357)
Q Consensus 195 --~~fD~Ii~~~~~~~ 208 (357)
++||+|++++++.+
T Consensus 158 ~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 158 TQGKPDIVYLDPMYPE 173 (258)
T ss_dssp HHCCCSEEEECCCC--
T ss_pred cCCCccEEEECCCCCC
Confidence 57999999988765
No 268
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=99.07 E-value=3.7e-10 Score=101.58 Aligned_cols=87 Identities=16% Similarity=0.261 Sum_probs=70.8
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCC--cEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc
Q 018346 117 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSN--CKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME 194 (357)
Q Consensus 117 ~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~--~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~ 194 (357)
.++.+++.+.+.++.+|||||||+|.++..+++..+. .+|+|+|+|+.+++.++++. .++++++++|+.+++++
T Consensus 30 i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~----~~~v~~i~~D~~~~~~~ 105 (279)
T 3uzu_A 30 VIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF----GELLELHAGDALTFDFG 105 (279)
T ss_dssp HHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH----GGGEEEEESCGGGCCGG
T ss_pred HHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc----CCCcEEEECChhcCChh
Confidence 4566777778888999999999999999999988421 34999999999999999883 23899999999987654
Q ss_pred c-------CccEEEEccccc
Q 018346 195 A-------SYDRIYSIEMFE 207 (357)
Q Consensus 195 ~-------~fD~Ii~~~~~~ 207 (357)
. ..+.|++|.+++
T Consensus 106 ~~~~~~~~~~~~vv~NlPY~ 125 (279)
T 3uzu_A 106 SIARPGDEPSLRIIGNLPYN 125 (279)
T ss_dssp GGSCSSSSCCEEEEEECCHH
T ss_pred HhcccccCCceEEEEccCcc
Confidence 2 234788998874
No 269
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=99.07 E-value=8.7e-10 Score=97.59 Aligned_cols=88 Identities=23% Similarity=0.272 Sum_probs=71.8
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcccc
Q 018346 116 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEA 195 (357)
Q Consensus 116 ~~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 195 (357)
..++.+++.+...++.+|||||||+|.++..+++. +..+|+|+|+|+.+++.++++ +..+++++++|+.+++++.
T Consensus 18 ~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~-~~~~v~avEid~~~~~~~~~~----~~~~v~~i~~D~~~~~~~~ 92 (249)
T 3ftd_A 18 GVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQH-PLKKLYVIELDREMVENLKSI----GDERLEVINEDASKFPFCS 92 (249)
T ss_dssp HHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTS-CCSEEEEECCCHHHHHHHTTS----CCTTEEEECSCTTTCCGGG
T ss_pred HHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHc-CCCeEEEEECCHHHHHHHHhc----cCCCeEEEEcchhhCChhH
Confidence 35666788888888899999999999999999976 347999999999999999876 2248999999999876652
Q ss_pred --CccEEEEcccccc
Q 018346 196 --SYDRIYSIEMFEH 208 (357)
Q Consensus 196 --~fD~Ii~~~~~~~ 208 (357)
....|++|.+++-
T Consensus 93 ~~~~~~vv~NlPy~i 107 (249)
T 3ftd_A 93 LGKELKVVGNLPYNV 107 (249)
T ss_dssp SCSSEEEEEECCTTT
T ss_pred ccCCcEEEEECchhc
Confidence 1247888888853
No 270
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=99.05 E-value=3.8e-09 Score=103.46 Aligned_cols=109 Identities=14% Similarity=0.083 Sum_probs=89.4
Q ss_pred CCCCEEEEECCcccHHHHHHHHHC---CCcEEEEEcCCHHHHHHHHHHHHHcCC--CCeEEEEeccCCC--cc--ccCcc
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKY---SNCKITGICNSKTQKEFIEEQCRVLEL--QNVEIIVADISTF--EM--EASYD 198 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~---p~~~v~~vD~s~~~l~~a~~~~~~~~~--~~v~~~~~d~~~~--~~--~~~fD 198 (357)
.++.+|+|.+||+|.+...+++.. +...++|+|+++.++..|+.|+...|+ +++.+.++|.... +. ..+||
T Consensus 220 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD 299 (542)
T 3lkd_A 220 KQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFD 299 (542)
T ss_dssp CTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBS
T ss_pred CCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceeccccccccccccc
Confidence 467899999999999999988874 256999999999999999999988888 4788999998765 31 26799
Q ss_pred EEEEcccccch--------hh---------------HHHHHHHHHHhcc-cCceEEEEeccC
Q 018346 199 RIYSIEMFEHM--------KN---------------YQNLLKKISKWMK-EDTLLFVHHFCH 236 (357)
Q Consensus 199 ~Ii~~~~~~~~--------~~---------------~~~~l~~~~~~Lk-pgG~l~~~~~~~ 236 (357)
+|++|+|+..- .+ .-.++..+.+.|+ |||++.+..|..
T Consensus 300 ~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g 361 (542)
T 3lkd_A 300 GVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHG 361 (542)
T ss_dssp EEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETH
T ss_pred EEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecch
Confidence 99999998421 00 1247899999999 999999988765
No 271
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=99.05 E-value=3.7e-10 Score=110.79 Aligned_cols=119 Identities=12% Similarity=0.029 Sum_probs=89.5
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCC---------------CcEEEEEcCCHHHHHHHHHHHHHcCCC-C
Q 018346 117 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYS---------------NCKITGICNSKTQKEFIEEQCRVLELQ-N 180 (357)
Q Consensus 117 ~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p---------------~~~v~~vD~s~~~l~~a~~~~~~~~~~-~ 180 (357)
....+++.+...++ +|||.+||+|.+...+++..+ ...++|+|+++.++..|+.++...|++ +
T Consensus 233 Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~ 311 (544)
T 3khk_A 233 IVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFN 311 (544)
T ss_dssp HHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCB
T ss_pred HHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcc
Confidence 33445555555444 999999999999888764321 458999999999999999999888874 4
Q ss_pred eEEEEeccCCCcc--ccCccEEEEcccccch-------------------------h----hHHHHHHHHHHhcccCceE
Q 018346 181 VEIIVADISTFEM--EASYDRIYSIEMFEHM-------------------------K----NYQNLLKKISKWMKEDTLL 229 (357)
Q Consensus 181 v~~~~~d~~~~~~--~~~fD~Ii~~~~~~~~-------------------------~----~~~~~l~~~~~~LkpgG~l 229 (357)
+.+.++|....+. ..+||+|++|+|+..- + ..-.++..+.+.|+|||++
T Consensus 312 i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~ 391 (544)
T 3khk_A 312 FGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSM 391 (544)
T ss_dssp CCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEE
T ss_pred cceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceE
Confidence 4447888765432 2689999999998641 0 0125889999999999999
Q ss_pred EEEeccC
Q 018346 230 FVHHFCH 236 (357)
Q Consensus 230 ~~~~~~~ 236 (357)
.+..|..
T Consensus 392 aiVlP~g 398 (544)
T 3khk_A 392 ALLLANG 398 (544)
T ss_dssp EEEEETH
T ss_pred EEEecch
Confidence 9988754
No 272
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.04 E-value=3e-10 Score=106.92 Aligned_cols=78 Identities=19% Similarity=0.215 Sum_probs=68.2
Q ss_pred CCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHc--CCCCeEEEEeccCCC-cc--ccCccEEEEc
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL--ELQNVEIIVADISTF-EM--EASYDRIYSI 203 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~--~~~~v~~~~~d~~~~-~~--~~~fD~Ii~~ 203 (357)
++.+|||+|||+|..+..+++. +.+|+++|+|+.+++.|++|+... |+++++++++|+.+. +. .++||+|+++
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~--g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSK--ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred CCCEEEEeCCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEEC
Confidence 4789999999999999999876 679999999999999999999988 777899999999875 22 1589999999
Q ss_pred ccccc
Q 018346 204 EMFEH 208 (357)
Q Consensus 204 ~~~~~ 208 (357)
+++..
T Consensus 171 PPrr~ 175 (410)
T 3ll7_A 171 PARRS 175 (410)
T ss_dssp CEEC-
T ss_pred CCCcC
Confidence 87743
No 273
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.99 E-value=2.1e-09 Score=107.68 Aligned_cols=110 Identities=10% Similarity=0.026 Sum_probs=82.3
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCC---CcEEEEEcCCHHHHHHH--HHHHHH----cCCCCeEEEEeccCCCc--cccC
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYS---NCKITGICNSKTQKEFI--EEQCRV----LELQNVEIIVADISTFE--MEAS 196 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p---~~~v~~vD~s~~~l~~a--~~~~~~----~~~~~v~~~~~d~~~~~--~~~~ 196 (357)
.++.+|||.|||+|.++..+++..+ ..+++|+|+++.+++.| +.++.. .+.+...+...|+.... ...+
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~k 399 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFAN 399 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTT
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCC
Confidence 4578999999999999999998764 35799999999999999 555543 23333455666665532 1268
Q ss_pred ccEEEEcccccch---h--------------------------hHHHHHHHHHHhcccCceEEEEeccCC
Q 018346 197 YDRIYSIEMFEHM---K--------------------------NYQNLLKKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 197 fD~Ii~~~~~~~~---~--------------------------~~~~~l~~~~~~LkpgG~l~~~~~~~~ 237 (357)
||+|++|+|+... + ....+++.+.+.|+|||++.+..|..-
T Consensus 400 FDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~ 469 (878)
T 3s1s_A 400 VSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQY 469 (878)
T ss_dssp EEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHH
T ss_pred CCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHH
Confidence 9999999999321 0 133478889999999999999888653
No 274
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.97 E-value=3.2e-10 Score=100.60 Aligned_cols=103 Identities=17% Similarity=0.237 Sum_probs=72.6
Q ss_pred HHHHcCCCCC--CEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHc-------C-C-CCeEEEEeccC
Q 018346 121 YCERSRLEDG--HTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL-------E-L-QNVEIIVADIS 189 (357)
Q Consensus 121 l~~~~~~~~~--~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~-------~-~-~~v~~~~~d~~ 189 (357)
+++.+++.++ .+|||+|||+|..++.++.. +++|+++|+|+.+.+.++++++.. + + ++++++++|..
T Consensus 78 l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~--g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~ 155 (258)
T 2oyr_A 78 VAKAVGIKGDYLPDVVDATAGLGRDAFVLASV--GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSL 155 (258)
T ss_dssp HHHHTTCBTTBCCCEEETTCTTCHHHHHHHHH--TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHH
T ss_pred HHHHhcccCCCCCEEEEcCCcCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHH
Confidence 4455566667 89999999999999999988 678999999998877776665432 2 3 37999999987
Q ss_pred CCc--cccCccEEEEcccccchhhHHHHHHHHHHhcccC
Q 018346 190 TFE--MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKED 226 (357)
Q Consensus 190 ~~~--~~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~Lkpg 226 (357)
+.. .+++||+|++++++.+-. ....+++..+.|++.
T Consensus 156 ~~L~~~~~~fDvV~lDP~y~~~~-~saavkk~~~~lr~l 193 (258)
T 2oyr_A 156 TALTDITPRPQVVYLDPMFPHKQ-KSALVKKEMRVFQSL 193 (258)
T ss_dssp HHSTTCSSCCSEEEECCCCCCCC-C-----HHHHHHHHH
T ss_pred HHHHhCcccCCEEEEcCCCCCcc-cchHHHHHHHHHHHh
Confidence 632 125799999999996642 123344444444443
No 275
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.95 E-value=5.4e-10 Score=99.05 Aligned_cols=87 Identities=13% Similarity=0.152 Sum_probs=68.7
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcccc-
Q 018346 117 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEA- 195 (357)
Q Consensus 117 ~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~- 195 (357)
..+.+++.+.+.++.+|||||||+|.++. ++ ..+..+|+++|+|+.+++.++++.... ++++++++|+.+++++.
T Consensus 9 i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~-~~~~~~v~avEid~~~~~~a~~~~~~~--~~v~~i~~D~~~~~~~~~ 84 (252)
T 1qyr_A 9 VIDSIVSAINPQKGQAMVEIGPGLAALTE-PV-GERLDQLTVIELDRDLAARLQTHPFLG--PKLTIYQQDAMTFNFGEL 84 (252)
T ss_dssp HHHHHHHHHCCCTTCCEEEECCTTTTTHH-HH-HTTCSCEEEECCCHHHHHHHHTCTTTG--GGEEEECSCGGGCCHHHH
T ss_pred HHHHHHHhcCCCCcCEEEEECCCCcHHHH-hh-hCCCCeEEEEECCHHHHHHHHHHhccC--CceEEEECchhhCCHHHh
Confidence 55667777778888999999999999999 65 432223999999999999998876543 38999999998875432
Q ss_pred -----CccEEEEccccc
Q 018346 196 -----SYDRIYSIEMFE 207 (357)
Q Consensus 196 -----~fD~Ii~~~~~~ 207 (357)
..|.|++|.++.
T Consensus 85 ~~~~~~~~~vvsNlPY~ 101 (252)
T 1qyr_A 85 AEKMGQPLRVFGNLPYN 101 (252)
T ss_dssp HHHHTSCEEEEEECCTT
T ss_pred hcccCCceEEEECCCCC
Confidence 347899999875
No 276
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.94 E-value=4.4e-09 Score=103.98 Aligned_cols=127 Identities=15% Similarity=0.184 Sum_probs=87.7
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHcCC----CCCCEEEEECCcccHHHHHH---HHHC-CCcEEEEEcCCHHHHHHHHHHHH
Q 018346 103 FSDASKTLEDAEKAMLELYCERSRL----EDGHTVLDVGCGWGSLSLYI---AQKY-SNCKITGICNSKTQKEFIEEQCR 174 (357)
Q Consensus 103 f~~~~~~l~~~~~~~l~~l~~~~~~----~~~~~vLDiGcG~G~~~~~l---a~~~-p~~~v~~vD~s~~~l~~a~~~~~ 174 (357)
|+.+.......++++...+.++... ..+..|||+|||+|.++... +++. -..+|++||-|+. ...|++..+
T Consensus 327 FEkD~vKy~~Ye~AI~~Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~-A~~a~~~v~ 405 (637)
T 4gqb_A 327 FEKDPIKYSQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPN-AVVTLENWQ 405 (637)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHH-HHHHHHHHH
T ss_pred hcCChhhHHHHHHHHHHHHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHH-HHHHHHHHH
Confidence 4443344455555566555554322 23467999999999984443 4332 1237899999985 557888888
Q ss_pred HcCCC-CeEEEEeccCCCccccCccEEEEcccccch--hhHHHHHHHHHHhcccCceEE
Q 018346 175 VLELQ-NVEIIVADISTFEMEASYDRIYSIEMFEHM--KNYQNLLKKISKWMKEDTLLF 230 (357)
Q Consensus 175 ~~~~~-~v~~~~~d~~~~~~~~~fD~Ii~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~ 230 (357)
.++.+ +|+++++|++++..++++|+|||-.+=..+ +.....+....+.|||||.++
T Consensus 406 ~N~~~dkVtVI~gd~eev~LPEKVDIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 406 FEEWGSQVTVVSSDMREWVAPEKADIIVSELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp HHTTGGGEEEEESCTTTCCCSSCEEEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred hccCCCeEEEEeCcceeccCCcccCEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 88874 899999999998777899999986532111 233467777789999999863
No 277
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.90 E-value=4.8e-09 Score=92.95 Aligned_cols=83 Identities=8% Similarity=0.097 Sum_probs=69.0
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc--c
Q 018346 117 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM--E 194 (357)
Q Consensus 117 ~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~--~ 194 (357)
+++.+++.+.+.++..++|.+||.|+.+..+++. +.+|+|+|.++.+++.|++ +.. ++++++++|+.++.. .
T Consensus 10 Ll~e~le~L~~~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~-L~~---~rv~lv~~~f~~l~~~L~ 83 (285)
T 1wg8_A 10 LYQEALDLLAVRPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKG-LHL---PGLTVVQGNFRHLKRHLA 83 (285)
T ss_dssp THHHHHHHHTCCTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHH-TCC---TTEEEEESCGGGHHHHHH
T ss_pred HHHHHHHhhCCCCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHh-hcc---CCEEEEECCcchHHHHHH
Confidence 4556677777888899999999999999999987 7899999999999999988 543 489999999988632 1
Q ss_pred ----cCccEEEEccc
Q 018346 195 ----ASYDRIYSIEM 205 (357)
Q Consensus 195 ----~~fD~Ii~~~~ 205 (357)
+++|.|+++..
T Consensus 84 ~~g~~~vDgIL~DLG 98 (285)
T 1wg8_A 84 ALGVERVDGILADLG 98 (285)
T ss_dssp HTTCSCEEEEEEECS
T ss_pred HcCCCCcCEEEeCCc
Confidence 46999998653
No 278
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.90 E-value=2.1e-08 Score=85.28 Aligned_cols=97 Identities=13% Similarity=0.160 Sum_probs=77.1
Q ss_pred CCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCC---CCeEEEEeccCCC--------------
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL---QNVEIIVADISTF-------------- 191 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~---~~v~~~~~d~~~~-------------- 191 (357)
+..+|||+||| ..++.+++. ++.+|+.+|.+++..+.|+++++..|+ ++|+++.+|+.+.
T Consensus 30 ~a~~VLEiGtG--ySTl~lA~~-~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~ 106 (202)
T 3cvo_A 30 EAEVILEYGSG--GSTVVAAEL-PGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRS 106 (202)
T ss_dssp HCSEEEEESCS--HHHHHHHTS-TTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGG
T ss_pred CCCEEEEECch--HHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhh
Confidence 56799999985 677888864 478999999999999999999999885 4899999996542
Q ss_pred -c--------cc--cCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEe
Q 018346 192 -E--------ME--ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 192 -~--------~~--~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
+ .. ++||+|+...-.. ...+..+.+.|+|||++++..
T Consensus 107 l~~~~~~i~~~~~~~~fDlIfIDg~k~-----~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 107 YPDYPLAVWRTEGFRHPDVVLVDGRFR-----VGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp TTHHHHGGGGCTTCCCCSEEEECSSSH-----HHHHHHHHHHCSSCEEEEETT
T ss_pred HHHHhhhhhccccCCCCCEEEEeCCCc-----hhHHHHHHHhcCCCeEEEEeC
Confidence 1 12 6799999987532 355666779999999997743
No 279
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.88 E-value=9.3e-09 Score=92.28 Aligned_cols=109 Identities=12% Similarity=0.054 Sum_probs=86.9
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHc--C---CCCeEEEEeccCCCccc--cCccEE
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL--E---LQNVEIIVADISTFEME--ASYDRI 200 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~--~---~~~v~~~~~d~~~~~~~--~~fD~I 200 (357)
+++++||-||.|.|..+..+++..|..+|+.+||++..++.+++.+... + -++++++.+|...+... ++||+|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 4678999999999999999998766679999999999999999987542 2 24899999999886432 789999
Q ss_pred EEcccccch----hhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 201 YSIEMFEHM----KNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 201 i~~~~~~~~----~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
++...-..- -...++++.+.+.|+|||+++....++
T Consensus 162 i~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~sp 201 (294)
T 3o4f_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVC 201 (294)
T ss_dssp EESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEES
T ss_pred EEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCCc
Confidence 987532111 123678999999999999999876554
No 280
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.85 E-value=1.1e-08 Score=101.13 Aligned_cols=118 Identities=14% Similarity=0.060 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHcCC-CCCCEEEEECCcccHHHHHHHHHC-------------CCcEEEEEcCCHHHHHHHHHHHHHcC
Q 018346 112 DAEKAMLELYCERSRL-EDGHTVLDVGCGWGSLSLYIAQKY-------------SNCKITGICNSKTQKEFIEEQCRVLE 177 (357)
Q Consensus 112 ~~~~~~l~~l~~~~~~-~~~~~vLDiGcG~G~~~~~la~~~-------------p~~~v~~vD~s~~~l~~a~~~~~~~~ 177 (357)
..+.++...+.++... ..+..|||+|||+|.++...+... ...+|++||.|+.++...+.... ++
T Consensus 391 ~Y~~AI~~al~d~~~~~~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng 469 (745)
T 3ua3_A 391 VYGEAVVGALKDLGADGRKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RT 469 (745)
T ss_dssp HHHHHHHHHHHHHHTTCCSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HT
T ss_pred HHHHHHHHHHHHhhcccCCCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cC
Confidence 3344444443333321 235689999999999975432211 13499999999987766555544 66
Q ss_pred CC-CeEEEEeccCCCcc------ccCccEEEEcccccch--hhHHHHHHHHHHhcccCceEE
Q 018346 178 LQ-NVEIIVADISTFEM------EASYDRIYSIEMFEHM--KNYQNLLKKISKWMKEDTLLF 230 (357)
Q Consensus 178 ~~-~v~~~~~d~~~~~~------~~~fD~Ii~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~ 230 (357)
.. +|+++.+|++++.. +++.|+|||-..=... +-..+.+..+.+.|||||.++
T Consensus 470 ~~d~VtVI~gd~eev~lp~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 470 WKRRVTIIESDMRSLPGIAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp TTTCSEEEESCGGGHHHHHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred CCCeEEEEeCchhhcccccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 64 79999999999765 5789999997652211 234567777889999999754
No 281
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.82 E-value=1.6e-08 Score=93.83 Aligned_cols=113 Identities=15% Similarity=0.029 Sum_probs=91.3
Q ss_pred HcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCC------CCeEEEEeccCCCcc--cc
Q 018346 124 RSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL------QNVEIIVADISTFEM--EA 195 (357)
Q Consensus 124 ~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~------~~v~~~~~d~~~~~~--~~ 195 (357)
.++..+|.+|||+++|.|+-+..++...++..|+++|+|+.-+...++++...+. .++.+...|...++. .+
T Consensus 143 ~L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~ 222 (359)
T 4fzv_A 143 ALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGD 222 (359)
T ss_dssp HHCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTT
T ss_pred HhCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccc
Confidence 3567899999999999999999999887667899999999999999999988764 368888888876532 26
Q ss_pred CccEEEEcccccch------------------------hhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 196 SYDRIYSIEMFEHM------------------------KNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 196 ~fD~Ii~~~~~~~~------------------------~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
.||.|++..+-..- .-..+++..+.+.|||||+|+.++-+.
T Consensus 223 ~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl 287 (359)
T 4fzv_A 223 TYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSL 287 (359)
T ss_dssp CEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred cCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCC
Confidence 89999987764320 013578899999999999998877654
No 282
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.82 E-value=3.2e-09 Score=93.52 Aligned_cols=117 Identities=18% Similarity=0.273 Sum_probs=78.3
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc-c
Q 018346 117 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-A 195 (357)
Q Consensus 117 ~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~ 195 (357)
++.++.++..+.++.+|||||||.|..+..+++..+...|+|+|++.+........ ...+. ++..+..++....+. +
T Consensus 62 KL~ei~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~-~~~g~-~ii~~~~~~dv~~l~~~ 139 (277)
T 3evf_A 62 KLRWFHERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNV-QSLGW-NIITFKDKTDIHRLEPV 139 (277)
T ss_dssp HHHHHHHTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCC-CBTTG-GGEEEECSCCTTTSCCC
T ss_pred HHHHHHHhCCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccccccc-CcCCC-CeEEEeccceehhcCCC
Confidence 55566666666788899999999999999988765455788899874421000000 00111 445566655433333 6
Q ss_pred CccEEEEccccc----chhhHH--HHHHHHHHhcccC-ceEEEEecc
Q 018346 196 SYDRIYSIEMFE----HMKNYQ--NLLKKISKWMKED-TLLFVHHFC 235 (357)
Q Consensus 196 ~fD~Ii~~~~~~----~~~~~~--~~l~~~~~~Lkpg-G~l~~~~~~ 235 (357)
+||+|+|....+ ..+... .+++.+.++|+|| |.+++..+.
T Consensus 140 ~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 140 KCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp CCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred CccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 899999988665 222222 3578889999999 999998886
No 283
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.73 E-value=7e-08 Score=89.90 Aligned_cols=125 Identities=13% Similarity=0.111 Sum_probs=84.2
Q ss_pred HHHHHHHHHHcCCCC-----CCEEEEECCcccHHHHHHH--------HHC-------CCcEEEEEcCCHHHHHHHHHHHH
Q 018346 115 KAMLELYCERSRLED-----GHTVLDVGCGWGSLSLYIA--------QKY-------SNCKITGICNSKTQKEFIEEQCR 174 (357)
Q Consensus 115 ~~~l~~l~~~~~~~~-----~~~vLDiGcG~G~~~~~la--------~~~-------p~~~v~~vD~s~~~l~~a~~~~~ 174 (357)
..+++..++.+.... +.+|+|+|||+|..+..+. +++ |..+|...|+........-+.+.
T Consensus 33 ~~~~~~ai~~l~~~~~~~~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~ 112 (374)
T 3b5i_A 33 LHLLEETLENVHLNSSASPPPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLP 112 (374)
T ss_dssp HHHHHHHHHTSCCCCSSSCCCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSC
T ss_pred HHHHHHHHHHhhccccCCCCceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhh
Confidence 455565666555543 5789999999999988872 222 56789999987765544433332
Q ss_pred HcC-----------C-CCeEEEEeccCC---Cccc-cCccEEEEcccccchh----------------------------
Q 018346 175 VLE-----------L-QNVEIIVADIST---FEME-ASYDRIYSIEMFEHMK---------------------------- 210 (357)
Q Consensus 175 ~~~-----------~-~~v~~~~~d~~~---~~~~-~~fD~Ii~~~~~~~~~---------------------------- 210 (357)
... . .+-.|+.+.... -.++ +++|+|+|+.++||+.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v 192 (374)
T 3b5i_A 113 PLVSNTCMEECLAADGNRSYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKT 192 (374)
T ss_dssp CBCCCC--CCC---CCCBCSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHH
T ss_pred hhhhhcchhhhccccCCCceEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHH
Confidence 210 0 011234433322 2233 8899999999999984
Q ss_pred ----------hHHHHHHHHHHhcccCceEEEEeccCCCC
Q 018346 211 ----------NYQNLLKKISKWMKEDTLLFVHHFCHKTF 239 (357)
Q Consensus 211 ----------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 239 (357)
|...+++...+.|+|||++++...+..+.
T Consensus 193 ~~ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~~~gr~~~ 231 (374)
T 3b5i_A 193 TTAYKRQFQADLAEFLRARAAEVKRGGAMFLVCLGRTSV 231 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEecCCCC
Confidence 45567888899999999999999987653
No 284
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.66 E-value=1.7e-07 Score=91.79 Aligned_cols=121 Identities=17% Similarity=0.126 Sum_probs=91.4
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCC-------------CcEEEEEcCCHHHHHHHHHHHHHcCCCCeE
Q 018346 116 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYS-------------NCKITGICNSKTQKEFIEEQCRVLELQNVE 182 (357)
Q Consensus 116 ~~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p-------------~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~ 182 (357)
.+.+.+++.+...++.+|+|-+||+|++...+.+... ...++|+|+++.+...|+.|+.-.|.+...
T Consensus 204 ~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~~ 283 (530)
T 3ufb_A 204 PVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPR 283 (530)
T ss_dssp HHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCCE
T ss_pred HHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCcccc
Confidence 3445566667777888999999999999887765321 246999999999999999999888886667
Q ss_pred EEEeccCCCccc-----cCccEEEEcccccch----------------hhHHHHHHHHHHhcc-------cCceEEEEec
Q 018346 183 IIVADISTFEME-----ASYDRIYSIEMFEHM----------------KNYQNLLKKISKWMK-------EDTLLFVHHF 234 (357)
Q Consensus 183 ~~~~d~~~~~~~-----~~fD~Ii~~~~~~~~----------------~~~~~~l~~~~~~Lk-------pgG~l~~~~~ 234 (357)
+..+|....+.. .+||+|++|+|+..- .....++..+.+.|| |||++.+..|
T Consensus 284 I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP 363 (530)
T 3ufb_A 284 IDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVP 363 (530)
T ss_dssp EECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEE
T ss_pred ccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEec
Confidence 778887654321 579999999999421 112346777888886 7999999888
Q ss_pred cC
Q 018346 235 CH 236 (357)
Q Consensus 235 ~~ 236 (357)
..
T Consensus 364 ~g 365 (530)
T 3ufb_A 364 NG 365 (530)
T ss_dssp HH
T ss_pred ch
Confidence 64
No 285
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.65 E-value=1.3e-08 Score=89.75 Aligned_cols=116 Identities=21% Similarity=0.256 Sum_probs=78.3
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEe--ccCCCccc
Q 018346 117 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVA--DISTFEME 194 (357)
Q Consensus 117 ~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~--d~~~~~~~ 194 (357)
++.++.++..+.++.+|||||||.|.++..+++..+...|+|+|++..+...+.. ....+. ++..... |+..++ .
T Consensus 78 KL~ei~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~-~~~~g~-~ii~~~~~~dv~~l~-~ 154 (282)
T 3gcz_A 78 KLRWMEERGYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIM-RTTLGW-NLIRFKDKTDVFNME-V 154 (282)
T ss_dssp HHHHHHHTTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCBTTG-GGEEEECSCCGGGSC-C
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccc-cccCCC-ceEEeeCCcchhhcC-C
Confidence 5566667767788889999999999999998876655689999998653211111 000111 3333443 333332 2
Q ss_pred cCccEEEEccccc----chhhHH--HHHHHHHHhcccC--ceEEEEecc
Q 018346 195 ASYDRIYSIEMFE----HMKNYQ--NLLKKISKWMKED--TLLFVHHFC 235 (357)
Q Consensus 195 ~~fD~Ii~~~~~~----~~~~~~--~~l~~~~~~Lkpg--G~l~~~~~~ 235 (357)
.++|+|+|..... .++... .+++-+.++|+|| |.+++-.+.
T Consensus 155 ~~~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 155 IPGDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp CCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred CCcCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 6899999988765 222222 3577788999999 999998886
No 286
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.64 E-value=8.3e-08 Score=86.95 Aligned_cols=86 Identities=15% Similarity=0.110 Sum_probs=70.1
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc--
Q 018346 117 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-- 193 (357)
Q Consensus 117 ~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-- 193 (357)
+++++++.+.+.++..++|..||.|+.+..+++.. |..+|+|+|.++.+++.|+ ++ ..++++++++++.++..
T Consensus 45 Ll~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL---~~~Rv~lv~~nF~~l~~~L 120 (347)
T 3tka_A 45 LLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI---DDPRFSIIHGPFSALGEYV 120 (347)
T ss_dssp TTHHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC---CCTTEEEEESCGGGHHHHH
T ss_pred cHHHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh---cCCcEEEEeCCHHHHHHHH
Confidence 56778888888899999999999999999999885 6789999999999999884 33 22489999999887531
Q ss_pred -c----cCccEEEEcccc
Q 018346 194 -E----ASYDRIYSIEMF 206 (357)
Q Consensus 194 -~----~~fD~Ii~~~~~ 206 (357)
. +++|.|+.+..+
T Consensus 121 ~~~g~~~~vDgILfDLGV 138 (347)
T 3tka_A 121 AERDLIGKIDGILLDLGV 138 (347)
T ss_dssp HHTTCTTCEEEEEEECSC
T ss_pred HhcCCCCcccEEEECCcc
Confidence 1 258999987643
No 287
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.60 E-value=1.7e-07 Score=74.30 Aligned_cols=98 Identities=20% Similarity=0.205 Sum_probs=66.1
Q ss_pred HHHHHHHHcCCCCCCEEEEECCccc-HHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc-
Q 018346 117 MLELYCERSRLEDGHTVLDVGCGWG-SLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME- 194 (357)
Q Consensus 117 ~l~~l~~~~~~~~~~~vLDiGcG~G-~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~- 194 (357)
+.+.+.+.. .++.+|||||||+| ..+..|+++. +..|+++|+|+.+++ +++.|+++....
T Consensus 25 LaeYI~~~~--~~~~rVlEVG~G~g~~vA~~La~~~-g~~V~atDInp~Av~---------------~v~dDiF~P~~~~ 86 (153)
T 2k4m_A 25 LAVYIIRCS--GPGTRVVEVGAGRFLYVSDYIRKHS-KVDLVLTDIKPSHGG---------------IVRDDITSPRMEI 86 (153)
T ss_dssp HHHHHHHHS--CSSSEEEEETCTTCCHHHHHHHHHS-CCEEEEECSSCSSTT---------------EECCCSSSCCHHH
T ss_pred HHHHHHhcC--CCCCcEEEEccCCChHHHHHHHHhC-CCeEEEEECCccccc---------------eEEccCCCCcccc
Confidence 444444443 34679999999999 6999999853 889999999998544 788999885443
Q ss_pred -cCccEEEE-cccccchhhHHHHHHHHHHhcccCceEEEEeccCCC
Q 018346 195 -ASYDRIYS-IEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHKT 238 (357)
Q Consensus 195 -~~fD~Ii~-~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 238 (357)
..||+|.+ +++-+- ...+-++.+. -|.-+++...+.+.
T Consensus 87 Y~~~DLIYsirPP~El----~~~i~~lA~~--v~adliI~pL~~E~ 126 (153)
T 2k4m_A 87 YRGAALIYSIRPPAEI----HSSLMRVADA--VGARLIIKPLTGED 126 (153)
T ss_dssp HTTEEEEEEESCCTTT----HHHHHHHHHH--HTCEEEEECBTTBC
T ss_pred cCCcCEEEEcCCCHHH----HHHHHHHHHH--cCCCEEEEcCCCCc
Confidence 58999965 444432 2333333332 35677776555443
No 288
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.50 E-value=2.1e-07 Score=86.80 Aligned_cols=107 Identities=14% Similarity=0.081 Sum_probs=75.6
Q ss_pred CCEEEEECCcccHHHHHHHHH-----------------CCCcEEEEEcCC-----------HHHHHHHHHHHHHcCC-CC
Q 018346 130 GHTVLDVGCGWGSLSLYIAQK-----------------YSNCKITGICNS-----------KTQKEFIEEQCRVLEL-QN 180 (357)
Q Consensus 130 ~~~vLDiGcG~G~~~~~la~~-----------------~p~~~v~~vD~s-----------~~~l~~a~~~~~~~~~-~~ 180 (357)
..+|+|+|||+|..+..+... .|..+|+..|+. +...+.+++ ..|. .+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~---~~g~~~~ 129 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEK---ENGRKIG 129 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHH---HTCCCTT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhh---hccCCCC
Confidence 578999999999999887765 356789999987 433332211 2222 13
Q ss_pred eEEEEeccCCC---ccc-cCccEEEEcccccchhhHH---------------------------------------HHHH
Q 018346 181 VEIIVADISTF---EME-ASYDRIYSIEMFEHMKNYQ---------------------------------------NLLK 217 (357)
Q Consensus 181 v~~~~~d~~~~---~~~-~~fD~Ii~~~~~~~~~~~~---------------------------------------~~l~ 217 (357)
..|+.+....+ .++ +++|+|+|+.++||+.+.+ .+|+
T Consensus 130 ~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~ 209 (384)
T 2efj_A 130 SCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLR 209 (384)
T ss_dssp SEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 46777665442 333 8899999999999973221 2256
Q ss_pred HHHHhcccCceEEEEeccCCCC
Q 018346 218 KISKWMKEDTLLFVHHFCHKTF 239 (357)
Q Consensus 218 ~~~~~LkpgG~l~~~~~~~~~~ 239 (357)
.-.+.|+|||++++...+..+.
T Consensus 210 ~Ra~eL~pGG~mvl~~~gr~~~ 231 (384)
T 2efj_A 210 IHSEELISRGRMLLTFICKEDE 231 (384)
T ss_dssp HHHHHEEEEEEEEEEEECCCTT
T ss_pred HHHHHhccCCeEEEEEecCCCc
Confidence 6689999999999999988764
No 289
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.50 E-value=4.3e-07 Score=81.30 Aligned_cols=118 Identities=8% Similarity=0.024 Sum_probs=87.5
Q ss_pred HHHHHHHHHHcC-CCCCCEEEEECCcccHHHHHHHHHC-----CCcEEEEEcCCH-------------------------
Q 018346 115 KAMLELYCERSR-LEDGHTVLDVGCGWGSLSLYIAQKY-----SNCKITGICNSK------------------------- 163 (357)
Q Consensus 115 ~~~l~~l~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~-----p~~~v~~vD~s~------------------------- 163 (357)
...+..+++.+. ...+.+|||+||..|..++.++... ++.+|+++|...
T Consensus 91 ~~~L~~l~~~v~~~~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~ 170 (282)
T 2wk1_A 91 LENIRQCVEDVIGNNVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVL 170 (282)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHH
T ss_pred HHHHHHHHHHHHhcCCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccc
Confidence 334444444332 2345699999999999999987654 477899999642
Q ss_pred -HHHHHHHHHHHHcCC--CCeEEEEeccCCCcc---ccCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEec
Q 018346 164 -TQKEFIEEQCRVLEL--QNVEIIVADISTFEM---EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 164 -~~l~~a~~~~~~~~~--~~v~~~~~d~~~~~~---~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
..++.++++++..|+ ++|+++.+|+.+... .++||+|+...-. .......++.+.+.|+|||++++...
T Consensus 171 ~~~~~~ar~n~~~~gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~--y~~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 171 AVSEEEVRRNFRNYDLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL--YESTWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp CCCHHHHHHHHHHTTCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS--HHHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred hhHHHHHHHHHHHcCCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc--cccHHHHHHHHHhhcCCCEEEEEcCC
Confidence 146778999999987 589999999876321 2679999998642 23456789999999999999988554
No 290
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.46 E-value=2.4e-07 Score=82.07 Aligned_cols=104 Identities=14% Similarity=0.134 Sum_probs=72.5
Q ss_pred CCCCEEEEECCcccHHHHHHHHH-------CCC-----cEEEEEcCCH---HHHH-----------HHHHHHHH------
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQK-------YSN-----CKITGICNSK---TQKE-----------FIEEQCRV------ 175 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~-------~p~-----~~v~~vD~s~---~~l~-----------~a~~~~~~------ 175 (357)
.++.+|||+|||+|..+..+++. .|. .+++++|..| +.+. .|+++...
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 35579999999999998887654 563 5899999876 4333 55555543
Q ss_pred ------c--CCCCeEEEEeccCCC-cc-cc----CccEEEEccccc-chhh--HHHHHHHHHHhcccCceEEE
Q 018346 176 ------L--ELQNVEIIVADISTF-EM-EA----SYDRIYSIEMFE-HMKN--YQNLLKKISKWMKEDTLLFV 231 (357)
Q Consensus 176 ------~--~~~~v~~~~~d~~~~-~~-~~----~fD~Ii~~~~~~-~~~~--~~~~l~~~~~~LkpgG~l~~ 231 (357)
. +..+++++.+|+.+. +. +. .||+|+..+.-. .-++ ...+++.+.++|+|||+++.
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred chhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 1 113688999998763 21 12 799999975211 1122 46799999999999999875
No 291
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.36 E-value=6.2e-07 Score=82.96 Aligned_cols=106 Identities=16% Similarity=0.104 Sum_probs=80.4
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHc-----C---CCCeEEEEeccCCCcc----c-
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL-----E---LQNVEIIVADISTFEM----E- 194 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~-----~---~~~v~~~~~d~~~~~~----~- 194 (357)
.++++||-||.|.|..+..+.+. |..+|+.|||++..++.+++.+... . .++++++.+|...+.. .
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh-~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~ 282 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKL-KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 282 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTT-CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCCeEEEECCCcHHHHHHHHhc-CCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhcc
Confidence 35689999999999999999875 5689999999999999999875321 1 1258999999876431 1
Q ss_pred cCccEEEEccccc-------c---hhhHHHHHHHHHHhcccCceEEEEec
Q 018346 195 ASYDRIYSIEMFE-------H---MKNYQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 195 ~~fD~Ii~~~~~~-------~---~~~~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
++||+|+....-. . ....+++++.+.+.|+|||+++...-
T Consensus 283 ~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~ 332 (381)
T 3c6k_A 283 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN 332 (381)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecC
Confidence 5799999874211 1 12246789999999999999988643
No 292
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.29 E-value=6.8e-07 Score=82.65 Aligned_cols=111 Identities=11% Similarity=0.026 Sum_probs=79.9
Q ss_pred CCCEEEEECCcccHHHHHHHHH----------------CCCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEEeccCC-
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQK----------------YSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADIST- 190 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~----------------~p~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~- 190 (357)
...+|+|+||++|..+..+... .|..+|+..|+.......+-+.+..... ++..|+.+....
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSF 130 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSF 130 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCS
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhh
Confidence 4478999999999876654332 3567999999988887777665543110 133555555433
Q ss_pred --Cccc-cCccEEEEcccccchhh---------------------------------HHHHHHHHHHhcccCceEEEEec
Q 018346 191 --FEME-ASYDRIYSIEMFEHMKN---------------------------------YQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 191 --~~~~-~~fD~Ii~~~~~~~~~~---------------------------------~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
-.++ +++|+|+|+.++||+.. ...+++.-.+.|+|||++++...
T Consensus 131 y~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~ 210 (359)
T 1m6e_X 131 YGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTIL 210 (359)
T ss_dssp SSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEE
T ss_pred hhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEe
Confidence 2334 88999999999998732 33458888999999999999999
Q ss_pred cCCCC
Q 018346 235 CHKTF 239 (357)
Q Consensus 235 ~~~~~ 239 (357)
+..+.
T Consensus 211 gr~~~ 215 (359)
T 1m6e_X 211 GRRSE 215 (359)
T ss_dssp ECSSS
T ss_pred cCCCC
Confidence 88764
No 293
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.29 E-value=7.7e-07 Score=78.94 Aligned_cols=116 Identities=19% Similarity=0.243 Sum_probs=73.4
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEe--ccCCCccc
Q 018346 117 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVA--DISTFEME 194 (357)
Q Consensus 117 ~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~--d~~~~~~~ 194 (357)
++.++.+..-+.++.+|||+||++|.++..+++..+...|+|+|++..+...... ....+. ++..... |+..+. .
T Consensus 69 KL~ei~ek~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~~~~~-~iv~~~~~~di~~l~-~ 145 (300)
T 3eld_A 69 KIRWLHERGYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQTLGW-NIVKFKDKSNVFTMP-T 145 (300)
T ss_dssp HHHHHHHHTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCBTTG-GGEEEECSCCTTTSC-C
T ss_pred HHHHHHHhCCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-ccccCC-ceEEeecCceeeecC-C
Confidence 3444555533467899999999999999999976545589999997542100000 000011 2333333 333322 2
Q ss_pred cCccEEEEccccc----chhhH--HHHHHHHHHhcccC-ceEEEEecc
Q 018346 195 ASYDRIYSIEMFE----HMKNY--QNLLKKISKWMKED-TLLFVHHFC 235 (357)
Q Consensus 195 ~~fD~Ii~~~~~~----~~~~~--~~~l~~~~~~Lkpg-G~l~~~~~~ 235 (357)
.++|+|+|...-+ .++.. ..++.-+.++|+|| |.+++-.+.
T Consensus 146 ~~~DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 146 EPSDTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp CCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred CCcCEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 6899999987655 12221 34577788999999 999998886
No 294
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.22 E-value=1.1e-06 Score=75.07 Aligned_cols=120 Identities=18% Similarity=0.253 Sum_probs=83.0
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEe-ccCCCccc
Q 018346 116 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVA-DISTFEME 194 (357)
Q Consensus 116 ~~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~-d~~~~~~~ 194 (357)
.++.++.++..+.++.+|||+||+.|..+.+.+......+|+|+|+-..-.+. -......|.+.|+|.++ |+...+.
T Consensus 65 ~KL~ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~-P~~~~s~gwn~v~fk~gvDv~~~~~- 142 (267)
T 3p8z_A 65 AKLQWFVERNMVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEE-PVPMSTYGWNIVKLMSGKDVFYLPP- 142 (267)
T ss_dssp HHHHHHHHTTSSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCC-CCCCCCTTTTSEEEECSCCGGGCCC-
T ss_pred HHHHHHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccC-cchhhhcCcCceEEEeccceeecCC-
Confidence 35667777777788999999999999999988877644579999987652210 00112234457999999 9876543
Q ss_pred cCccEEEEcccccch-h--h---HHHHHHHHHHhcccCceEEEEeccCCC
Q 018346 195 ASYDRIYSIEMFEHM-K--N---YQNLLKKISKWMKEDTLLFVHHFCHKT 238 (357)
Q Consensus 195 ~~fD~Ii~~~~~~~~-~--~---~~~~l~~~~~~LkpgG~l~~~~~~~~~ 238 (357)
.++|.|+|...=..- + + ..++++.+.+.|++ |.+++-++++..
T Consensus 143 ~~~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~ 191 (267)
T 3p8z_A 143 EKCDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYM 191 (267)
T ss_dssp CCCSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCS
T ss_pred ccccEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCC
Confidence 679999997532111 1 1 12367777899998 788888776654
No 295
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.22 E-value=6e-06 Score=72.88 Aligned_cols=118 Identities=20% Similarity=0.291 Sum_probs=81.4
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEe-ccCCCccc
Q 018346 116 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVA-DISTFEME 194 (357)
Q Consensus 116 ~~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~-d~~~~~~~ 194 (357)
.++.++.++..+.++.+||||||++|..+.+.+......+|+|+|+...-.+.= ......+-+-|.|..+ |+..+++
T Consensus 81 ~KL~ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P-~~~~ql~w~lV~~~~~~Dv~~l~~- 158 (321)
T 3lkz_A 81 AKLRWLVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEP-QLVQSYGWNIVTMKSGVDVFYRPS- 158 (321)
T ss_dssp HHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCC-CCCCBTTGGGEEEECSCCTTSSCC-
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCc-chhhhcCCcceEEEeccCHhhCCC-
Confidence 456677777777888899999999999999888765344799999976511000 0001112224788887 8877654
Q ss_pred cCccEEEEcccccchhh-------HHHHHHHHHHhcccC-ceEEEEeccC
Q 018346 195 ASYDRIYSIEMFEHMKN-------YQNLLKKISKWMKED-TLLFVHHFCH 236 (357)
Q Consensus 195 ~~fD~Ii~~~~~~~~~~-------~~~~l~~~~~~Lkpg-G~l~~~~~~~ 236 (357)
.++|+|+|.-. +.-++ ..++|+.+.+.|++| |-+++-++++
T Consensus 159 ~~~D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~p 207 (321)
T 3lkz_A 159 ECCDTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCP 207 (321)
T ss_dssp CCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred CCCCEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCC
Confidence 67999999765 32211 123677778999999 8999988876
No 296
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.20 E-value=4.4e-06 Score=76.94 Aligned_cols=87 Identities=13% Similarity=0.171 Sum_probs=64.3
Q ss_pred CCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc-cCccEEEEccc
Q 018346 127 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEM 205 (357)
Q Consensus 127 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~Ii~~~~ 205 (357)
+.+|.+|||+||+.|+.+..++++ +.+|++||+.+-. ..+.. .++|+++++|.....++ .++|+|+|..+
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r--g~~V~aVD~~~l~-----~~l~~--~~~V~~~~~d~~~~~~~~~~~D~vvsDm~ 279 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR--NMWVYSVDNGPMA-----QSLMD--TGQVTWLREDGFKFRPTRSNISWMVCDMV 279 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT--TCEEEEECSSCCC-----HHHHT--TTCEEEECSCTTTCCCCSSCEEEEEECCS
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC--CCEEEEEEhhhcC-----hhhcc--CCCeEEEeCccccccCCCCCcCEEEEcCC
Confidence 468999999999999999999988 7899999987531 12222 24899999999887655 67999999876
Q ss_pred ccchhhHHHHHHHHHHhcccC
Q 018346 206 FEHMKNYQNLLKKISKWMKED 226 (357)
Q Consensus 206 ~~~~~~~~~~l~~~~~~Lkpg 226 (357)
.. +...+..+.+.|..+
T Consensus 280 ~~----p~~~~~l~~~wl~~~ 296 (375)
T 4auk_A 280 EK----PAKVAALMAQWLVNG 296 (375)
T ss_dssp SC----HHHHHHHHHHHHHTT
T ss_pred CC----hHHhHHHHHHHHhcc
Confidence 53 344445555544443
No 297
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.12 E-value=1.7e-06 Score=75.05 Aligned_cols=117 Identities=20% Similarity=0.244 Sum_probs=71.0
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHH-cCCCCeEEEEe-ccCCCcc
Q 018346 116 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRV-LELQNVEIIVA-DISTFEM 193 (357)
Q Consensus 116 ~~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~-~~~~~v~~~~~-d~~~~~~ 193 (357)
.++.++.++.-+.++.+|||+||+.|..+..+++..+-..|.|.++.... . ....... .|..=+.|.++ |+.++.
T Consensus 60 yKL~EIdeK~likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~-~~P~~~~~~Gv~~i~~~~G~Df~~~~- 136 (269)
T 2px2_A 60 AKLRWLVERRFVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H-EEPMLMQSYGWNIVTMKSGVDVFYKP- 136 (269)
T ss_dssp HHHHHHHHTTSCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S-CCCCCCCSTTGGGEEEECSCCGGGSC-
T ss_pred HHHHHHHHcCCCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c-cCCCcccCCCceEEEeeccCCccCCC-
Confidence 35566666655678999999999999999999876211233444433220 0 0000000 11111355557 998754
Q ss_pred ccCccEEEEccccc-ch--hhHH---HHHHHHHHhcccCc-eEEEEecc
Q 018346 194 EASYDRIYSIEMFE-HM--KNYQ---NLLKKISKWMKEDT-LLFVHHFC 235 (357)
Q Consensus 194 ~~~fD~Ii~~~~~~-~~--~~~~---~~l~~~~~~LkpgG-~l~~~~~~ 235 (357)
+.++|+|+|...-. .. -|.. .+++-+.++|+||| .+++-.+.
T Consensus 137 ~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 137 SEISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred CCCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC
Confidence 25799999976322 11 1111 25777789999999 99998887
No 298
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.06 E-value=1.4e-05 Score=72.30 Aligned_cols=58 Identities=17% Similarity=0.083 Sum_probs=49.3
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHc
Q 018346 116 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL 176 (357)
Q Consensus 116 ~~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~ 176 (357)
.++..+++... .++..|||++||+|..+..++.. +.+++|+|+++.+++.|++++...
T Consensus 223 ~l~~~~i~~~~-~~~~~vlD~f~GsGt~~~~a~~~--g~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 223 ELAERLVRMFS-FVGDVVLDPFAGTGTTLIAAARW--GRRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp HHHHHHHHHHC-CTTCEEEETTCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHHHHHHHh
Confidence 35556666554 57889999999999999998876 789999999999999999998765
No 299
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.83 E-value=7.3e-06 Score=72.68 Aligned_cols=103 Identities=12% Similarity=0.003 Sum_probs=81.5
Q ss_pred CCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCC-----ccccCccEEEEc
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF-----EMEASYDRIYSI 203 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~-----~~~~~fD~Ii~~ 203 (357)
.+..+||+-+|||.+++.+.+. +.+++.+|.++..++..++|+.. .++++++..|.... +...+||+|++.
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS~--~d~~vfvE~~~~a~~~L~~Nl~~--~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiD 166 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLRS--QDRLYLCELHPTEYNFLLKLPHF--NKKVYVNHTDGVSKLNALLPPPEKRGLIFID 166 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSCT--TSEEEEECCSHHHHHHHTTSCCT--TSCEEEECSCHHHHHHHHCSCTTSCEEEEEC
T ss_pred cCCCceeEeCCcHHHHHHHcCC--CCeEEEEeCCHHHHHHHHHHhCc--CCcEEEEeCcHHHHHHHhcCCCCCccEEEEC
Confidence 3567999999999999998873 68999999999999999888865 24799999997552 122479999999
Q ss_pred ccccchhhHHHHHHHHHH--hcccCceEEEEecc
Q 018346 204 EMFEHMKNYQNLLKKISK--WMKEDTLLFVHHFC 235 (357)
Q Consensus 204 ~~~~~~~~~~~~l~~~~~--~LkpgG~l~~~~~~ 235 (357)
++++.-.++.++++.+.+ .+.|+|++++=.|.
T Consensus 167 PPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi 200 (283)
T 2oo3_A 167 PSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPV 200 (283)
T ss_dssp CCCCSTTHHHHHHHHHHHHHHHCTTSEEEEEEEE
T ss_pred CCCCCCcHHHHHHHHHHHhCccCCCeEEEEEEec
Confidence 999855567777777765 46799998885543
No 300
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.76 E-value=0.00014 Score=64.23 Aligned_cols=108 Identities=13% Similarity=0.055 Sum_probs=74.7
Q ss_pred HHHHHHHHc-----CCCCCCEEEEECC------cccHHHHHHHHHCCC-cEEEEEcCCHHHHHHHHHHHHHcCCCCeEEE
Q 018346 117 MLELYCERS-----RLEDGHTVLDVGC------GWGSLSLYIAQKYSN-CKITGICNSKTQKEFIEEQCRVLELQNVEII 184 (357)
Q Consensus 117 ~l~~l~~~~-----~~~~~~~vLDiGc------G~G~~~~~la~~~p~-~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~ 184 (357)
.+..++..+ ..+.+.+|||+|+ ..|. ..+.+..|. +.|+++|+.+-.. ..+ .++
T Consensus 92 kytqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS--~VLr~~~p~g~~VVavDL~~~~s-----------da~-~~I 157 (344)
T 3r24_A 92 KYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFVS-----------DAD-STL 157 (344)
T ss_dssp HHHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCBC-----------SSS-EEE
T ss_pred HHHHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcH--HHHHHhCCCCcEEEEeeCccccc-----------CCC-eEE
Confidence 455555544 3457899999996 5566 344555675 6999999987520 113 559
Q ss_pred EeccCCCccccCccEEEEcccccc-----------hhhHHHHHHHHHHhcccCceEEEEeccCCC
Q 018346 185 VADISTFEMEASYDRIYSIEMFEH-----------MKNYQNLLKKISKWMKEDTLLFVHHFCHKT 238 (357)
Q Consensus 185 ~~d~~~~~~~~~fD~Ii~~~~~~~-----------~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 238 (357)
++|........+||+|+|...-.. +.-.+.+++-+.+.|+|||.+++-++....
T Consensus 158 qGD~~~~~~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg 222 (344)
T 3r24_A 158 IGDCATVHTANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW 222 (344)
T ss_dssp ESCGGGEEESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC
T ss_pred EccccccccCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCC
Confidence 999876544478999999763211 112566788889999999999999886655
No 301
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.74 E-value=7.2e-05 Score=68.97 Aligned_cols=73 Identities=16% Similarity=0.183 Sum_probs=58.7
Q ss_pred HHHHHHHHHcCCCC------CCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccC
Q 018346 116 AMLELYCERSRLED------GHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADIS 189 (357)
Q Consensus 116 ~~l~~l~~~~~~~~------~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~ 189 (357)
..++.+++.+++.+ +..|||||.|.|.++..|++.....+|+++|+++..+...++.. . .++++++.+|+.
T Consensus 39 ~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~--~~~l~ii~~D~l 115 (353)
T 1i4w_A 39 TVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E--GSPLQILKRDPY 115 (353)
T ss_dssp HHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T--TSSCEEECSCTT
T ss_pred HHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c--CCCEEEEECCcc
Confidence 35566777766653 58999999999999999998643468999999999998888766 2 248999999997
Q ss_pred CC
Q 018346 190 TF 191 (357)
Q Consensus 190 ~~ 191 (357)
++
T Consensus 116 ~~ 117 (353)
T 1i4w_A 116 DW 117 (353)
T ss_dssp CH
T ss_pred ch
Confidence 65
No 302
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.60 E-value=0.00014 Score=64.46 Aligned_cols=59 Identities=17% Similarity=0.103 Sum_probs=48.2
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcC
Q 018346 116 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLE 177 (357)
Q Consensus 116 ~~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~ 177 (357)
.+++.+++... .++..|||..||+|..+....+. +.+++|+|+++.+++.|++++...+
T Consensus 200 ~l~~~~i~~~~-~~~~~vlD~f~GsGtt~~~a~~~--gr~~ig~e~~~~~~~~~~~r~~~~~ 258 (260)
T 1g60_A 200 DLIERIIRASS-NPNDLVLDCFMGSGTTAIVAKKL--GRNFIGCDMNAEYVNQANFVLNQLE 258 (260)
T ss_dssp HHHHHHHHHHC-CTTCEEEESSCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHHHHHHhcc
Confidence 35555665543 57889999999999999998876 7899999999999999999987654
No 303
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.28 E-value=8.3e-05 Score=84.84 Aligned_cols=104 Identities=15% Similarity=0.085 Sum_probs=57.5
Q ss_pred CCCEEEEECCcccHHHHHHHHHCC-----CcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCC-c-cccCccEEE
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKYS-----NCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF-E-MEASYDRIY 201 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~p-----~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~-~-~~~~fD~Ii 201 (357)
+..+|||||.|+|..+..+.+... ..+++.+|+|+...+.|+++++.. ++..-..|..+. + .+.+||+|+
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~---di~~~~~d~~~~~~~~~~~ydlvi 1316 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL---HVTQGQWDPANPAPGSLGKADLLV 1316 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH---TEEEECCCSSCCCC-----CCEEE
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc---ccccccccccccccCCCCceeEEE
Confidence 567999999999988777665542 237899999998888888777653 333322233321 1 126799999
Q ss_pred EcccccchhhHHHHHHHHHHhcccCceEEEEecc
Q 018346 202 SIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFC 235 (357)
Q Consensus 202 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 235 (357)
+..++|..++....+.+++++|||||.+++....
T Consensus 1317 a~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~~ 1350 (2512)
T 2vz8_A 1317 CNCALATLGDPAVAVGNMAATLKEGGFLLLHTLL 1350 (2512)
T ss_dssp EECC--------------------CCEEEEEEC-
T ss_pred EcccccccccHHHHHHHHHHhcCCCcEEEEEecc
Confidence 9999988888899999999999999999886543
No 304
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=97.07 E-value=0.012 Score=53.73 Aligned_cols=104 Identities=16% Similarity=0.150 Sum_probs=79.6
Q ss_pred CCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcC---------------------CCCeEEEEec
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLE---------------------LQNVEIIVAD 187 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~---------------------~~~v~~~~~d 187 (357)
+...|+.+|||.......+....++..++-+|. |+.++.-++.+...+ .++..++.+|
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 567999999999999999988767888999998 888887777766541 1478999999
Q ss_pred cCCCcc---------c-cCccEEEEcccccch--hhHHHHHHHHHHhcccCceEEEEec
Q 018346 188 ISTFEM---------E-ASYDRIYSIEMFEHM--KNYQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 188 ~~~~~~---------~-~~fD~Ii~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
+.+... . +...++++-.++.++ +...++++.+.+.. |+|.+++...
T Consensus 176 L~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~ 233 (334)
T 1rjd_A 176 LNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDP 233 (334)
T ss_dssp TTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEE
T ss_pred CCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEec
Confidence 987321 1 346789999999998 45677888888877 6777654433
No 305
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.89 E-value=0.0056 Score=56.99 Aligned_cols=72 Identities=17% Similarity=0.109 Sum_probs=57.0
Q ss_pred CEEEEECCcccHHHHHHHHHCCCcE-EEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc---------ccCccEE
Q 018346 131 HTVLDVGCGWGSLSLYIAQKYSNCK-ITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM---------EASYDRI 200 (357)
Q Consensus 131 ~~vLDiGcG~G~~~~~la~~~p~~~-v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~---------~~~fD~I 200 (357)
.+++|+.||.|.++..+... +.+ |.++|+++.+++..+.|.. +..++++|+.++.. ...+|+|
T Consensus 3 ~~vidLFsG~GGlslG~~~a--G~~~v~avE~d~~a~~t~~~N~~-----~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i 75 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA--GFDVKMAVEIDQHAINTHAINFP-----RSLHVQEDVSLLNAEIIKGFFKNDMPIDGI 75 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH--TCEEEEEECSCHHHHHHHHHHCT-----TSEEECCCGGGCCHHHHHHHHCSCCCCCEE
T ss_pred CeEEEEccCcCHHHHHHHHC--CCcEEEEEeCCHHHHHHHHHhCC-----CCceEecChhhcCHHHHHhhcccCCCeeEE
Confidence 58999999999999999887 554 6699999998887777642 56778899887632 2469999
Q ss_pred EEcccccch
Q 018346 201 YSIEMFEHM 209 (357)
Q Consensus 201 i~~~~~~~~ 209 (357)
+..++-+.+
T Consensus 76 ~ggpPCQ~f 84 (376)
T 3g7u_A 76 IGGPPCQGF 84 (376)
T ss_dssp EECCCCCTT
T ss_pred EecCCCCCc
Confidence 998885444
No 306
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.86 E-value=0.0014 Score=60.27 Aligned_cols=75 Identities=15% Similarity=0.203 Sum_probs=56.2
Q ss_pred CCEEEEECCcccHHHHHHHHHCCCc-EEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc----cCccEEEEcc
Q 018346 130 GHTVLDVGCGWGSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME----ASYDRIYSIE 204 (357)
Q Consensus 130 ~~~vLDiGcG~G~~~~~la~~~p~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~----~~fD~Ii~~~ 204 (357)
..+|+|+.||.|.++..+....-.. .|.++|+++.+++..+.|.. +..++.+|+.++... ..+|+|+..+
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~-----~~~~~~~Di~~~~~~~~~~~~~D~l~~gp 76 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP-----HTQLLAKTIEGITLEEFDRLSFDMILMSP 76 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT-----TSCEECSCGGGCCHHHHHHHCCSEEEECC
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc-----ccccccCCHHHccHhHcCcCCcCEEEEcC
Confidence 3589999999999999998873113 68999999999988888763 345678898876432 2699999999
Q ss_pred cccch
Q 018346 205 MFEHM 209 (357)
Q Consensus 205 ~~~~~ 209 (357)
+.+.+
T Consensus 77 PCq~f 81 (343)
T 1g55_A 77 PCQPF 81 (343)
T ss_dssp C----
T ss_pred CCcch
Confidence 85544
No 307
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.80 E-value=0.0029 Score=57.73 Aligned_cols=71 Identities=15% Similarity=0.106 Sum_probs=55.8
Q ss_pred CCEEEEECCcccHHHHHHHHHCCCc-EEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc--cCccEEEEcccc
Q 018346 130 GHTVLDVGCGWGSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME--ASYDRIYSIEMF 206 (357)
Q Consensus 130 ~~~vLDiGcG~G~~~~~la~~~p~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~--~~fD~Ii~~~~~ 206 (357)
+.+++|+.||.|.++..+... +. .|.++|+++.+++..+.|.... . .+|+.++... ..+|+|+..++.
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a--G~~~v~~~e~d~~a~~t~~~N~~~~---~----~~Di~~~~~~~~~~~D~l~~gpPC 81 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC--GAECVYSNEWDKYAQEVYEMNFGEK---P----EGDITQVNEKTIPDHDILCAGFPC 81 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT--TCEEEEEECCCHHHHHHHHHHHSCC---C----BSCGGGSCGGGSCCCSEEEEECCC
T ss_pred CCcEEEECCCcCHHHHHHHHC--CCeEEEEEeCCHHHHHHHHHHcCCC---C----cCCHHHcCHhhCCCCCEEEECCCC
Confidence 579999999999999999877 45 5778999999998888886422 1 5788776432 469999999877
Q ss_pred cch
Q 018346 207 EHM 209 (357)
Q Consensus 207 ~~~ 209 (357)
+.+
T Consensus 82 Q~f 84 (327)
T 2c7p_A 82 QAF 84 (327)
T ss_dssp TTT
T ss_pred CCc
Confidence 554
No 308
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.64 E-value=0.0058 Score=57.61 Aligned_cols=64 Identities=9% Similarity=0.123 Sum_probs=53.2
Q ss_pred CCCCCEEEEECCcccHHHHHHH-HHCCC-cEEEEEcCCHHHHHHHHHHHHH---cCC-CCeEEEEeccCC
Q 018346 127 LEDGHTVLDVGCGWGSLSLYIA-QKYSN-CKITGICNSKTQKEFIEEQCRV---LEL-QNVEIIVADIST 190 (357)
Q Consensus 127 ~~~~~~vLDiGcG~G~~~~~la-~~~p~-~~v~~vD~s~~~l~~a~~~~~~---~~~-~~v~~~~~d~~~ 190 (357)
+.++..|+|+|++.|..+..++ +..+. .+|+++|++|...+..+++++. ++. ++++++..-+.+
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al~~ 293 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAGE 293 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEECS
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEEEC
Confidence 4688999999999999999988 55543 7999999999999999999987 345 588887766554
No 309
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.57 E-value=0.008 Score=56.34 Aligned_cols=102 Identities=13% Similarity=0.057 Sum_probs=68.3
Q ss_pred HHcCCCCCCEEEEECCcc-cHHHHHHHHHCCCc-EEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCC-c------c
Q 018346 123 ERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF-E------M 193 (357)
Q Consensus 123 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~p~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~-~------~ 193 (357)
+...+.++.+||-+|||. |..+..+++.. ++ +|+++|.|++.++.+++ .|. +.+..+-.+. . .
T Consensus 179 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~----lGa---~~i~~~~~~~~~~~~~~~~ 250 (398)
T 2dph_A 179 VSAGVKPGSHVYIAGAGPVGRCAAAGARLL-GAACVIVGDQNPERLKLLSD----AGF---ETIDLRNSAPLRDQIDQIL 250 (398)
T ss_dssp HHTTCCTTCEEEEECCSHHHHHHHHHHHHH-TCSEEEEEESCHHHHHHHHT----TTC---EEEETTSSSCHHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHH----cCC---cEEcCCCcchHHHHHHHHh
Confidence 556788999999999986 88888888876 66 99999999987766543 443 2332211111 1 0
Q ss_pred c-cCccEEEEcccccch--------hhHHHHHHHHHHhcccCceEEEE
Q 018346 194 E-ASYDRIYSIEMFEHM--------KNYQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 194 ~-~~fD~Ii~~~~~~~~--------~~~~~~l~~~~~~LkpgG~l~~~ 232 (357)
. ..+|+|+-...-... ......++.+.++|+|||++++.
T Consensus 251 ~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 251 GKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp SSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECC
T ss_pred CCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEe
Confidence 1 269999865442210 01234678888999999998764
No 310
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.55 E-value=0.012 Score=54.49 Aligned_cols=99 Identities=12% Similarity=0.075 Sum_probs=67.7
Q ss_pred HHHHcCCCCCCEEEEECCcc-cHHHHHHHHHCCCc-EEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCc------
Q 018346 121 YCERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE------ 192 (357)
Q Consensus 121 l~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~p~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~------ 192 (357)
+.+...+.++.+||-+|+|. |..+..+++.. ++ +|+++|.+++.++.+++ .|.+. ++..+-.++.
T Consensus 182 l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~-Ga~~Vi~~~~~~~~~~~a~~----lGa~~--vi~~~~~~~~~~~~~~ 254 (371)
T 1f8f_A 182 CINALKVTPASSFVTWGAGAVGLSALLAAKVC-GASIIIAVDIVESRLELAKQ----LGATH--VINSKTQDPVAAIKEI 254 (371)
T ss_dssp HHTTTCCCTTCEEEEESCSHHHHHHHHHHHHH-TCSEEEEEESCHHHHHHHHH----HTCSE--EEETTTSCHHHHHHHH
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEECCCHHHHHHHHH----cCCCE--EecCCccCHHHHHHHh
Confidence 33556778899999999986 78888888876 66 79999999998777654 34421 2221111110
Q ss_pred cccCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEE
Q 018346 193 MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 193 ~~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 232 (357)
..+.+|+|+-...- ...++.+.+.|+|+|++++.
T Consensus 255 ~~gg~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 255 TDGGVNFALESTGS------PEILKQGVDALGILGKIAVV 288 (371)
T ss_dssp TTSCEEEEEECSCC------HHHHHHHHHTEEEEEEEEEC
T ss_pred cCCCCcEEEECCCC------HHHHHHHHHHHhcCCEEEEe
Confidence 01368998865432 34678888999999998774
No 311
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.53 E-value=0.0056 Score=56.24 Aligned_cols=95 Identities=18% Similarity=0.148 Sum_probs=67.7
Q ss_pred HHHcCCCCCCEEEEECCcc-cHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccccCccEE
Q 018346 122 CERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRI 200 (357)
Q Consensus 122 ~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~I 200 (357)
+....+.++.+||-+|+|. |..+..+++.. +++|+++|.|++.++.+++ .|.+.+ + .|...+ ...+|+|
T Consensus 169 l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~----lGa~~v--~-~~~~~~--~~~~D~v 238 (348)
T 3two_A 169 LKFSKVTKGTKVGVAGFGGLGSMAVKYAVAM-GAEVSVFARNEHKKQDALS----MGVKHF--Y-TDPKQC--KEELDFI 238 (348)
T ss_dssp HHHTTCCTTCEEEEESCSHHHHHHHHHHHHT-TCEEEEECSSSTTHHHHHH----TTCSEE--E-SSGGGC--CSCEEEE
T ss_pred HHhcCCCCCCEEEEECCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHh----cCCCee--c-CCHHHH--hcCCCEE
Confidence 3456788999999999975 78888888876 7899999999988776654 555322 2 333222 1379999
Q ss_pred EEcccccchhhHHHHHHHHHHhcccCceEEEE
Q 018346 201 YSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 201 i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 232 (357)
+-...-. ..+..+.++|+|+|++++.
T Consensus 239 id~~g~~------~~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 239 ISTIPTH------YDLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp EECCCSC------CCHHHHHTTEEEEEEEEEC
T ss_pred EECCCcH------HHHHHHHHHHhcCCEEEEE
Confidence 8654322 2456778899999998875
No 312
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=96.52 E-value=0.016 Score=54.24 Aligned_cols=102 Identities=14% Similarity=0.082 Sum_probs=69.2
Q ss_pred HHcCCCCCCEEEEECCcc-cHHHHHHHHHCCCc-EEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCC-Cc------c
Q 018346 123 ERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADIST-FE------M 193 (357)
Q Consensus 123 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~p~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~-~~------~ 193 (357)
....+.++.+||-+|||. |..+..+++.. ++ +|+++|.|++.++.+++ .|. +.+..+-.+ +. .
T Consensus 179 ~~~~~~~g~~VlV~GaG~vG~~aiqlAk~~-Ga~~Vi~~~~~~~~~~~a~~----lGa---~~i~~~~~~~~~~~v~~~t 250 (398)
T 1kol_A 179 VTAGVGPGSTVYVAGAGPVGLAAAASARLL-GAAVVIVGDLNPARLAHAKA----QGF---EIADLSLDTPLHEQIAALL 250 (398)
T ss_dssp HHTTCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHH----TTC---EEEETTSSSCHHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCcHHHHHHHHHHHHC-CCCeEEEEcCCHHHHHHHHH----cCC---cEEccCCcchHHHHHHHHh
Confidence 356778899999999875 88888899887 66 89999999998776654 454 222211111 10 0
Q ss_pred c-cCccEEEEccccc---------chhhHHHHHHHHHHhcccCceEEEE
Q 018346 194 E-ASYDRIYSIEMFE---------HMKNYQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 194 ~-~~fD~Ii~~~~~~---------~~~~~~~~l~~~~~~LkpgG~l~~~ 232 (357)
. ..+|+|+-...-. +.++....++.+.++|++||++++.
T Consensus 251 ~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 251 GEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp SSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEe
Confidence 1 3699998654321 1223345788889999999998764
No 313
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=96.51 E-value=0.03 Score=50.57 Aligned_cols=103 Identities=7% Similarity=0.039 Sum_probs=77.7
Q ss_pred CCEEEEECCcccHHHHHHHHHCC-CcEEEEEcCCHHHHHHHHHHHHHcCC---CCeEEEEeccCCCccc----------c
Q 018346 130 GHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLEL---QNVEIIVADISTFEME----------A 195 (357)
Q Consensus 130 ~~~vLDiGcG~G~~~~~la~~~p-~~~v~~vD~s~~~l~~a~~~~~~~~~---~~v~~~~~d~~~~~~~----------~ 195 (357)
...|++||||-=.-+..+. .| +..|+-+| .|..++..++.+...+. ++..++.+|+.+ ... .
T Consensus 103 ~~QvV~LGaGlDTra~Rl~--~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~ 178 (310)
T 2uyo_A 103 IRQFVILASGLDSRAYRLD--WPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPS 178 (310)
T ss_dssp CCEEEEETCTTCCHHHHSC--CCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTT
T ss_pred CCeEEEeCCCCCchhhhcc--CCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCC
Confidence 3579999999877655544 23 47999999 49999998888875432 378899999986 211 2
Q ss_pred CccEEEEcccccch--hhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 196 SYDRIYSIEMFEHM--KNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 196 ~fD~Ii~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
..=++++-.+++++ +....+++.+...+.||+.+++...+.
T Consensus 179 ~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~ 221 (310)
T 2uyo_A 179 ARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPL 221 (310)
T ss_dssp SCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCT
T ss_pred CCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCC
Confidence 23478888899998 456778999999889999999987654
No 314
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.49 E-value=0.016 Score=53.02 Aligned_cols=96 Identities=7% Similarity=0.116 Sum_probs=68.0
Q ss_pred HHHcCCCCCCEEEEECCcc-cHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-------
Q 018346 122 CERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM------- 193 (357)
Q Consensus 122 ~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~------- 193 (357)
++...+.++.+||-+|+|. |..+..+++.. +++|+++|.|++.++.+++ .|.+. .+ |..+...
T Consensus 159 l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~----lGa~~--~i--~~~~~~~~~~~~~~ 229 (340)
T 3s2e_A 159 LKVTDTRPGQWVVISGIGGLGHVAVQYARAM-GLRVAAVDIDDAKLNLARR----LGAEV--AV--NARDTDPAAWLQKE 229 (340)
T ss_dssp HHTTTCCTTSEEEEECCSTTHHHHHHHHHHT-TCEEEEEESCHHHHHHHHH----TTCSE--EE--ETTTSCHHHHHHHH
T ss_pred HHHcCCCCCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHH----cCCCE--EE--eCCCcCHHHHHHHh
Confidence 3556778899999999975 88899999887 7899999999998776644 45431 12 2222111
Q ss_pred ccCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEE
Q 018346 194 EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 194 ~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 232 (357)
.+.+|+|+.... ....++.+.++|+|+|++++.
T Consensus 230 ~g~~d~vid~~g------~~~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 230 IGGAHGVLVTAV------SPKAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp HSSEEEEEESSC------CHHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCCEEEEeCC------CHHHHHHHHHHhccCCEEEEe
Confidence 136888876532 135678888999999998874
No 315
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=96.48 E-value=0.018 Score=53.00 Aligned_cols=97 Identities=14% Similarity=0.108 Sum_probs=66.7
Q ss_pred HHcCCCCCCEEEEECCcc-cHHHHHHHHHCCCc-EEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEec---cCCCc---c-
Q 018346 123 ERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVAD---ISTFE---M- 193 (357)
Q Consensus 123 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~p~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d---~~~~~---~- 193 (357)
+...+.++.+||-+|+|. |..+..+++.. ++ +|+++|.|++.++.+++ .|.+ .++..+ ..+.. .
T Consensus 165 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~----lGa~--~vi~~~~~~~~~~~~~i~~ 237 (356)
T 1pl8_A 165 RRGGVTLGHKVLVCGAGPIGMVTLLVAKAM-GAAQVVVTDLSATRLSKAKE----IGAD--LVLQISKESPQEIARKVEG 237 (356)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHH----TTCS--EEEECSSCCHHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHH----hCCC--EEEcCcccccchHHHHHHH
Confidence 556778899999999975 78888888876 67 99999999987766643 4543 222211 01100 0
Q ss_pred --ccCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEE
Q 018346 194 --EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 194 --~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 232 (357)
...+|+|+-...- ...+..+.++|+|||++++.
T Consensus 238 ~~~~g~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 238 QLGCKPEVTIECTGA------EASIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp HHTSCCSEEEECSCC------HHHHHHHHHHSCTTCEEEEC
T ss_pred HhCCCCCEEEECCCC------hHHHHHHHHHhcCCCEEEEE
Confidence 1369999865432 34567788999999998774
No 316
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=96.39 E-value=0.016 Score=50.77 Aligned_cols=106 Identities=9% Similarity=0.091 Sum_probs=72.3
Q ss_pred CCEEEEECCcccHHHHHHHHH-------CCCcEEEEEc-----CCHH----------------------HHHHHHH---H
Q 018346 130 GHTVLDVGCGWGSLSLYIAQK-------YSNCKITGIC-----NSKT----------------------QKEFIEE---Q 172 (357)
Q Consensus 130 ~~~vLDiGcG~G~~~~~la~~-------~p~~~v~~vD-----~s~~----------------------~l~~a~~---~ 172 (357)
+..|+|+||-.|..+..++.. .+..+|++.| +.+. .+....+ +
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 358999999999988886642 2467999999 3221 1111111 1
Q ss_pred HHHcCC--CCeEEEEeccCCCcc------c-cCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEeccCC
Q 018346 173 CRVLEL--QNVEIIVADISTFEM------E-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 173 ~~~~~~--~~v~~~~~d~~~~~~------~-~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 237 (357)
.+..+. ++|+++.+++.+..+ + .++|+|....-. -......++.+...|+|||++++...+.+
T Consensus 150 ~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~--Y~~t~~~le~~~p~l~~GGvIv~DD~~~~ 221 (257)
T 3tos_A 150 SDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL--YEPTKAVLEAIRPYLTKGSIVAFDELDNP 221 (257)
T ss_dssp TSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC--HHHHHHHHHHHGGGEEEEEEEEESSTTCT
T ss_pred hhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc--cchHHHHHHHHHHHhCCCcEEEEcCCCCC
Confidence 112333 589999999876421 1 469999988742 34556788999999999999999876543
No 317
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.23 E-value=0.04 Score=51.02 Aligned_cols=96 Identities=18% Similarity=0.227 Sum_probs=67.5
Q ss_pred HHcCCCCCCEEEEECCcc-cHHHHHHHHHCCCc-EEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCc--------
Q 018346 123 ERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE-------- 192 (357)
Q Consensus 123 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~p~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~-------- 192 (357)
+...+.++.+||-+|+|. |..+..+++.. ++ +|+++|.+++.++.+++ .|.+. .+ |..+..
T Consensus 176 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~----lGa~~--vi--~~~~~~~~~~i~~~ 246 (370)
T 4ej6_A 176 DLSGIKAGSTVAILGGGVIGLLTVQLARLA-GATTVILSTRQATKRRLAEE----VGATA--TV--DPSAGDVVEAIAGP 246 (370)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCHHHHHHHHH----HTCSE--EE--CTTSSCHHHHHHST
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHH----cCCCE--EE--CCCCcCHHHHHHhh
Confidence 566788999999999875 77888888876 66 99999999997776654 45431 11 211110
Q ss_pred --c-ccCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEe
Q 018346 193 --M-EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 193 --~-~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
. .+.+|+|+-...- ...++.+.++|++||++++.-
T Consensus 247 ~~~~~gg~Dvvid~~G~------~~~~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 247 VGLVPGGVDVVIECAGV------AETVKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp TSSSTTCEEEEEECSCC------HHHHHHHHHHEEEEEEEEECS
T ss_pred hhccCCCCCEEEECCCC------HHHHHHHHHHhccCCEEEEEe
Confidence 1 1369999865321 346788889999999988743
No 318
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=96.21 E-value=0.024 Score=52.07 Aligned_cols=97 Identities=18% Similarity=0.149 Sum_probs=66.5
Q ss_pred HHcCCCCCCEEEEECCcc-cHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEecc-CCCc------c-
Q 018346 123 ERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADI-STFE------M- 193 (357)
Q Consensus 123 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~-~~~~------~- 193 (357)
+..++.++.+||-+|+|. |..+..+++.. +++|+++|.|++.++.++ ..|.+ ..+..+- .+.. .
T Consensus 162 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~----~lGa~--~~~~~~~~~~~~~~i~~~~~ 234 (352)
T 1e3j_A 162 RRAGVQLGTTVLVIGAGPIGLVSVLAAKAY-GAFVVCTARSPRRLEVAK----NCGAD--VTLVVDPAKEEESSIIERIR 234 (352)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHH----HTTCS--EEEECCTTTSCHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHH----HhCCC--EEEcCcccccHHHHHHHHhc
Confidence 556778899999999874 77888888876 788999999998776665 34553 1222110 1111 0
Q ss_pred ---ccCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEE
Q 018346 194 ---EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 194 ---~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 232 (357)
...+|+|+....- ...++.+.++|+|+|+++..
T Consensus 235 ~~~g~g~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 235 SAIGDLPNVTIDCSGN------EKCITIGINITRTGGTLMLV 270 (352)
T ss_dssp HHSSSCCSEEEECSCC------HHHHHHHHHHSCTTCEEEEC
T ss_pred cccCCCCCEEEECCCC------HHHHHHHHHHHhcCCEEEEE
Confidence 1359999875432 23567788999999998774
No 319
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.16 E-value=0.00095 Score=60.94 Aligned_cols=59 Identities=12% Similarity=0.016 Sum_probs=47.5
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCC
Q 018346 117 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL 178 (357)
Q Consensus 117 ~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~ 178 (357)
++..++... ..++..|||..||+|..+....+. +.+.+|+|+++..++.+++++...+.
T Consensus 241 l~~~~i~~~-~~~~~~VlDpF~GsGtt~~aa~~~--gr~~ig~e~~~~~~~~~~~r~~~~~~ 299 (323)
T 1boo_A 241 LPEFFIRML-TEPDDLVVDIFGGSNTTGLVAERE--SRKWISFEMKPEYVAASAFRFLDNNI 299 (323)
T ss_dssp HHHHHHHHH-CCTTCEEEETTCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHGGGSCSCS
T ss_pred HHHHHHHHh-CCCCCEEEECCCCCCHHHHHHHHc--CCCEEEEeCCHHHHHHHHHHHHhccc
Confidence 444455443 357889999999999999988776 78999999999999999998765543
No 320
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=96.15 E-value=0.017 Score=53.31 Aligned_cols=100 Identities=15% Similarity=0.043 Sum_probs=68.4
Q ss_pred HHcCCCCCCEEEEECCcc-cHHHHHHHHHCCCcE-EEEEcCCHHHHHHHHHHHHHcCCCCeEEEE-----eccCC-C---
Q 018346 123 ERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNCK-ITGICNSKTQKEFIEEQCRVLELQNVEIIV-----ADIST-F--- 191 (357)
Q Consensus 123 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~p~~~-v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~-----~d~~~-~--- 191 (357)
+..++.++.+||-+|+|. |..+..+++.. +++ |+++|.|++.++.+++. ... -+.+.. .|+.+ +
T Consensus 173 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~l-~~~---~~~~~~~~~~~~~~~~~v~~~ 247 (363)
T 3m6i_A 173 QRAGVRLGDPVLICGAGPIGLITMLCAKAA-GACPLVITDIDEGRLKFAKEI-CPE---VVTHKVERLSAEESAKKIVES 247 (363)
T ss_dssp HHHTCCTTCCEEEECCSHHHHHHHHHHHHT-TCCSEEEEESCHHHHHHHHHH-CTT---CEEEECCSCCHHHHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh-chh---cccccccccchHHHHHHHHHH
Confidence 566788999999999875 78888888886 776 99999999988888764 211 222221 11111 0
Q ss_pred ccccCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEe
Q 018346 192 EMEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 192 ~~~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
.....+|+|+-...- ...+..+.++|++||++++.-
T Consensus 248 t~g~g~Dvvid~~g~------~~~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 248 FGGIEPAVALECTGV------ESSIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp TSSCCCSEEEECSCC------HHHHHHHHHHSCTTCEEEECC
T ss_pred hCCCCCCEEEECCCC------hHHHHHHHHHhcCCCEEEEEc
Confidence 001469999875431 345778889999999988753
No 321
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=96.14 E-value=0.041 Score=45.81 Aligned_cols=94 Identities=17% Similarity=0.245 Sum_probs=61.9
Q ss_pred HHcCCCCCCEEEEECC--cccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-------
Q 018346 123 ERSRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM------- 193 (357)
Q Consensus 123 ~~~~~~~~~~vLDiGc--G~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~------- 193 (357)
+...+.++.+||..|+ |.|..+..+++.. +++|+++|.+++.++.+++ .|.+ . . .|..+...
T Consensus 32 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~~----~g~~-~-~--~d~~~~~~~~~~~~~ 102 (198)
T 1pqw_A 32 EVGRLSPGERVLIHSATGGVGMAAVSIAKMI-GARIYTTAGSDAKREMLSR----LGVE-Y-V--GDSRSVDFADEILEL 102 (198)
T ss_dssp TTSCCCTTCEEEETTTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHT----TCCS-E-E--EETTCSTHHHHHHHH
T ss_pred HHhCCCCCCEEEEeeCCChHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH----cCCC-E-E--eeCCcHHHHHHHHHH
Confidence 3456778999999994 4566666666554 7899999999887655532 3432 1 1 23322110
Q ss_pred --ccCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEE
Q 018346 194 --EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 194 --~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 232 (357)
...+|+|+.+.. ...++.+.+.|+|||++++.
T Consensus 103 ~~~~~~D~vi~~~g-------~~~~~~~~~~l~~~G~~v~~ 136 (198)
T 1pqw_A 103 TDGYGVDVVLNSLA-------GEAIQRGVQILAPGGRFIEL 136 (198)
T ss_dssp TTTCCEEEEEECCC-------THHHHHHHHTEEEEEEEEEC
T ss_pred hCCCCCeEEEECCc-------hHHHHHHHHHhccCCEEEEE
Confidence 135999987643 14577888999999998774
No 322
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=96.12 E-value=0.029 Score=50.96 Aligned_cols=71 Identities=18% Similarity=0.174 Sum_probs=55.3
Q ss_pred CEEEEECCcccHHHHHHHHHCCCcE-EEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc--cCccEEEEccccc
Q 018346 131 HTVLDVGCGWGSLSLYIAQKYSNCK-ITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME--ASYDRIYSIEMFE 207 (357)
Q Consensus 131 ~~vLDiGcG~G~~~~~la~~~p~~~-v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~--~~fD~Ii~~~~~~ 207 (357)
.+|+|+-||.|+++..+.+. |.+ +.++|+++.+.+.-+.|. .-.++.+|+.++... ...|+++..++-+
T Consensus 1 mkvidLFsG~GG~~~G~~~a--G~~~v~a~e~d~~a~~ty~~N~------~~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ 72 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKA--GFRIICANEYDKSIWKTYESNH------SAKLIKGDISKISSDEFPKCDGIIGGPPSQ 72 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHT--TCEEEEEEECCTTTHHHHHHHC------CSEEEESCGGGCCGGGSCCCSEEECCCCGG
T ss_pred CeEEEeCcCccHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHHC------CCCcccCChhhCCHhhCCcccEEEecCCCC
Confidence 47999999999999988876 554 569999999887777764 235688999887543 5799999888664
Q ss_pred ch
Q 018346 208 HM 209 (357)
Q Consensus 208 ~~ 209 (357)
.+
T Consensus 73 ~f 74 (331)
T 3ubt_Y 73 SW 74 (331)
T ss_dssp GT
T ss_pred Cc
Confidence 43
No 323
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=96.10 E-value=0.018 Score=51.64 Aligned_cols=75 Identities=9% Similarity=0.034 Sum_probs=57.2
Q ss_pred CCCCEEEEECCcccHHHHHHHHHCCCcE---EEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc-----cCccE
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKYSNCK---ITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-----ASYDR 199 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~p~~~---v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~-----~~fD~ 199 (357)
....+++|+.||.|+++..+... +.+ |.++|+++.+.+..+.|.. ...+..+|+.++... ..+|+
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~a--G~~~~~v~a~E~d~~a~~ty~~N~~-----~~~~~~~DI~~i~~~~i~~~~~~Dl 86 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDL--GIQVDRYIASEVCEDSITVGMVRHQ-----GKIMYVGDVRSVTQKHIQEWGPFDL 86 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHT--TBCEEEEEEECCCHHHHHHHHHHTT-----TCEEEECCGGGCCHHHHHHTCCCSE
T ss_pred CCCCEEEEeCcCccHHHHHHHHC--CCccceEEEEECCHHHHHHHHHhCC-----CCceeCCChHHccHHHhcccCCcCE
Confidence 35679999999999999998876 443 5899999998877666642 446788999886432 36999
Q ss_pred EEEcccccch
Q 018346 200 IYSIEMFEHM 209 (357)
Q Consensus 200 Ii~~~~~~~~ 209 (357)
++..++-+.+
T Consensus 87 l~ggpPCQ~f 96 (295)
T 2qrv_A 87 VIGGSPCNDL 96 (295)
T ss_dssp EEECCCCGGG
T ss_pred EEecCCCccc
Confidence 9998866543
No 324
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.87 E-value=0.0044 Score=55.71 Aligned_cols=57 Identities=11% Similarity=0.071 Sum_probs=43.2
Q ss_pred CCeEEEEeccCCCc--c-ccCccEEEEcccccch--------------------hhHHHHHHHHHHhcccCceEEEEecc
Q 018346 179 QNVEIIVADISTFE--M-EASYDRIYSIEMFEHM--------------------KNYQNLLKKISKWMKEDTLLFVHHFC 235 (357)
Q Consensus 179 ~~v~~~~~d~~~~~--~-~~~fD~Ii~~~~~~~~--------------------~~~~~~l~~~~~~LkpgG~l~~~~~~ 235 (357)
.+++++++|..+.. . .++||+|++++++... ..+..+++++.++|||||.+++.+..
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d 99 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGD 99 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECC
Confidence 36889999987632 2 2689999999998532 12356788999999999999997653
No 325
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=95.87 E-value=0.016 Score=52.62 Aligned_cols=58 Identities=16% Similarity=-0.023 Sum_probs=45.7
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCH---HHHHHHHHHHHHcC
Q 018346 117 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSK---TQKEFIEEQCRVLE 177 (357)
Q Consensus 117 ~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~---~~l~~a~~~~~~~~ 177 (357)
+++.++... ..++..|||.-||+|..+...... +.+.+|+|+++ ..++.+++++...+
T Consensus 231 l~~~~i~~~-~~~~~~vlDpF~GsGtt~~aa~~~--~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 231 VIERLVRAL-SHPGSTVLDFFAGSGVTARVAIQE--GRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp HHHHHHHHH-SCTTCEEEETTCTTCHHHHHHHHH--TCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred HHHHHHHHh-CCCCCEEEecCCCCCHHHHHHHHc--CCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 455555544 357889999999999999998887 78999999999 99999999887654
No 326
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=95.83 E-value=0.021 Score=51.59 Aligned_cols=92 Identities=13% Similarity=0.131 Sum_probs=62.4
Q ss_pred HHcCCCCCCEEEEECCc-ccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccccCccEEE
Q 018346 123 ERSRLEDGHTVLDVGCG-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIY 201 (357)
Q Consensus 123 ~~~~~~~~~~vLDiGcG-~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~Ii 201 (357)
+...+.++.+||-+|+| .|..+..+++.. +++|++++ |++.++.+++ .|.+ .+..|...+ ...+|+|+
T Consensus 136 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~-~~~~~~~~~~----lGa~---~v~~d~~~v--~~g~Dvv~ 204 (315)
T 3goh_A 136 EKIPLTKQREVLIVGFGAVNNLLTQMLNNA-GYVVDLVS-ASLSQALAAK----RGVR---HLYREPSQV--TQKYFAIF 204 (315)
T ss_dssp TTSCCCSCCEEEEECCSHHHHHHHHHHHHH-TCEEEEEC-SSCCHHHHHH----HTEE---EEESSGGGC--CSCEEEEE
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEE-ChhhHHHHHH----cCCC---EEEcCHHHh--CCCccEEE
Confidence 56677899999999996 478888888876 78999999 8887777654 3432 222242222 35799888
Q ss_pred EcccccchhhHHHHHHHHHHhcccCceEEEE
Q 018346 202 SIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 202 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 232 (357)
-...- ..+..+.++|+|+|+++..
T Consensus 205 d~~g~-------~~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 205 DAVNS-------QNAAALVPSLKANGHIICI 228 (315)
T ss_dssp CC--------------TTGGGEEEEEEEEEE
T ss_pred ECCCc-------hhHHHHHHHhcCCCEEEEE
Confidence 54321 1225567899999998875
No 327
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=95.83 E-value=0.03 Score=51.12 Aligned_cols=98 Identities=16% Similarity=0.160 Sum_probs=65.8
Q ss_pred HHHHHcCCCCCCEEEEECCc--ccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc----
Q 018346 120 LYCERSRLEDGHTVLDVGCG--WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM---- 193 (357)
Q Consensus 120 ~l~~~~~~~~~~~vLDiGcG--~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~---- 193 (357)
.+.+...+.++.+||-+|+| .|..+..+++.. +++|+++|.+++.++.+++ .|.+ . .+ |..+...
T Consensus 135 ~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----lga~-~-~~--~~~~~~~~~~~ 205 (340)
T 3gms_A 135 TCTETLNLQRNDVLLVNACGSAIGHLFAQLSQIL-NFRLIAVTRNNKHTEELLR----LGAA-Y-VI--DTSTAPLYETV 205 (340)
T ss_dssp HHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHH----HTCS-E-EE--ETTTSCHHHHH
T ss_pred HHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHh----CCCc-E-EE--eCCcccHHHHH
Confidence 34456678899999999987 577888888766 7899999999988777765 3442 1 12 2222110
Q ss_pred ----c-cCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEe
Q 018346 194 ----E-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 194 ----~-~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
. ..+|+|+.+..-. ......++|+|+|++++.-
T Consensus 206 ~~~~~~~g~Dvvid~~g~~-------~~~~~~~~l~~~G~iv~~G 243 (340)
T 3gms_A 206 MELTNGIGADAAIDSIGGP-------DGNELAFSLRPNGHFLTIG 243 (340)
T ss_dssp HHHTTTSCEEEEEESSCHH-------HHHHHHHTEEEEEEEEECC
T ss_pred HHHhCCCCCcEEEECCCCh-------hHHHHHHHhcCCCEEEEEe
Confidence 1 3699998754321 1233447999999988753
No 328
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.82 E-value=0.093 Score=47.78 Aligned_cols=95 Identities=9% Similarity=0.096 Sum_probs=65.9
Q ss_pred HHcCCCCCCEEEEECCc-ccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc-------
Q 018346 123 ERSRLEDGHTVLDVGCG-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME------- 194 (357)
Q Consensus 123 ~~~~~~~~~~vLDiGcG-~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~------- 194 (357)
....+.++.+||-+|+| .|..+..+++.. +++|+++|.|++.++.+++ .|.+. . .|..+....
T Consensus 158 ~~~~~~~g~~VlV~GaG~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----lGa~~--~--~d~~~~~~~~~~~~~~ 228 (339)
T 1rjw_A 158 KVTGAKPGEWVAIYGIGGLGHVAVQYAKAM-GLNVVAVDIGDEKLELAKE----LGADL--V--VNPLKEDAAKFMKEKV 228 (339)
T ss_dssp HHHTCCTTCEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHH----TTCSE--E--ECTTTSCHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH----CCCCE--E--ecCCCccHHHHHHHHh
Confidence 34467889999999986 477777888776 7899999999988776643 45421 1 233321110
Q ss_pred cCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEE
Q 018346 195 ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 195 ~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 232 (357)
+.+|+|+..... ...++.+.++|+++|+++..
T Consensus 229 ~~~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 229 GGVHAAVVTAVS------KPAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp SSEEEEEESSCC------HHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCEEEECCCC------HHHHHHHHHHhhcCCEEEEe
Confidence 368998875432 24577888999999998764
No 329
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=95.80 E-value=0.025 Score=52.45 Aligned_cols=96 Identities=9% Similarity=0.078 Sum_probs=66.4
Q ss_pred HHHcCCCCCCEEEEECCcc-cHHHHHHHHHCCCc-EEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCC----Ccc--
Q 018346 122 CERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADIST----FEM-- 193 (357)
Q Consensus 122 ~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~p~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~----~~~-- 193 (357)
.+...+.++.+||-+|+|. |..+..+++.. ++ +|+++|.|++.++.+++ .|.+. ++ |..+ +..
T Consensus 185 ~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~~----lGa~~--vi--~~~~~~~~~~~~~ 255 (374)
T 1cdo_A 185 VNTAKVEPGSTCAVFGLGAVGLAAVMGCHSA-GAKRIIAVDLNPDKFEKAKV----FGATD--FV--NPNDHSEPISQVL 255 (374)
T ss_dssp HTTTCCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHH----TTCCE--EE--CGGGCSSCHHHHH
T ss_pred HhccCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHH----hCCce--EE--eccccchhHHHHH
Confidence 3456678899999999874 77888888876 66 89999999998776653 45431 12 2221 100
Q ss_pred ----ccCccEEEEcccccchhhHHHHHHHHHHhcccC-ceEEEE
Q 018346 194 ----EASYDRIYSIEMFEHMKNYQNLLKKISKWMKED-TLLFVH 232 (357)
Q Consensus 194 ----~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~ 232 (357)
.+.+|+|+-...- ...+..+.++|+|+ |++++.
T Consensus 256 ~~~~~~g~D~vid~~g~------~~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 256 SKMTNGGVDFSLECVGN------VGVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp HHHHTSCBSEEEECSCC------HHHHHHHHHTBCTTTCEEEEC
T ss_pred HHHhCCCCCEEEECCCC------HHHHHHHHHHhhcCCcEEEEE
Confidence 1369999865432 34577888999999 998764
No 330
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.74 E-value=0.031 Score=51.33 Aligned_cols=100 Identities=17% Similarity=0.150 Sum_probs=67.8
Q ss_pred HHHcCCCCCCEEEEECCcc-cHHHHHHHHHCCCc-EEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCc------c
Q 018346 122 CERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE------M 193 (357)
Q Consensus 122 ~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~p~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~------~ 193 (357)
++...+.++.+||-+|+|. |..+..+++.. ++ +|+++|.+++.++.+++ .|.+ .++..+-.++. .
T Consensus 159 l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~~----lGa~--~vi~~~~~~~~~~v~~~t 231 (352)
T 3fpc_A 159 AELANIKLGDTVCVIGIGPVGLMSVAGANHL-GAGRIFAVGSRKHCCDIALE----YGAT--DIINYKNGDIVEQILKAT 231 (352)
T ss_dssp HHHTTCCTTCCEEEECCSHHHHHHHHHHHTT-TCSSEEEECCCHHHHHHHHH----HTCC--EEECGGGSCHHHHHHHHT
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHH----hCCc--eEEcCCCcCHHHHHHHHc
Confidence 3667788999999999875 77888888876 66 89999999987776654 4542 12211111110 0
Q ss_pred c-cCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEec
Q 018346 194 E-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 194 ~-~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
. ..+|+|+-...- ...+..+.+.|+|||+++..-.
T Consensus 232 ~g~g~D~v~d~~g~------~~~~~~~~~~l~~~G~~v~~G~ 267 (352)
T 3fpc_A 232 DGKGVDKVVIAGGD------VHTFAQAVKMIKPGSDIGNVNY 267 (352)
T ss_dssp TTCCEEEEEECSSC------TTHHHHHHHHEEEEEEEEECCC
T ss_pred CCCCCCEEEECCCC------hHHHHHHHHHHhcCCEEEEecc
Confidence 1 369999864332 2457778899999999887543
No 331
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.74 E-value=0.0092 Score=55.35 Aligned_cols=96 Identities=17% Similarity=0.246 Sum_probs=65.6
Q ss_pred HHHcCCCCCCEEEEECCcc-cHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCc----cccC
Q 018346 122 CERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE----MEAS 196 (357)
Q Consensus 122 ~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~----~~~~ 196 (357)
+....+.++.+||-+|+|. |..+..+++.. +++|+++|.|++.++.+++ .|.+. ++ |..+.. ....
T Consensus 187 l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~Vi~~~~~~~~~~~a~~----lGa~~--vi--~~~~~~~~~~~~~g 257 (369)
T 1uuf_A 187 LRHWQAGPGKKVGVVGIGGLGHMGIKLAHAM-GAHVVAFTTSEAKREAAKA----LGADE--VV--NSRNADEMAAHLKS 257 (369)
T ss_dssp HHHTTCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHH----HTCSE--EE--ETTCHHHHHTTTTC
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----cCCcE--Ee--ccccHHHHHHhhcC
Confidence 3445778899999999974 77888888876 7899999999998877654 45431 12 211100 0146
Q ss_pred ccEEEEcccccchhhHHHHHHHHHHhcccCceEEEE
Q 018346 197 YDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 197 fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 232 (357)
+|+|+....-. ..++.+.+.|+|+|+++..
T Consensus 258 ~Dvvid~~g~~------~~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 258 FDFILNTVAAP------HNLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp EEEEEECCSSC------CCHHHHHTTEEEEEEEEEC
T ss_pred CCEEEECCCCH------HHHHHHHHHhccCCEEEEe
Confidence 89988654321 2356677899999998764
No 332
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=95.71 E-value=0.022 Score=52.18 Aligned_cols=95 Identities=13% Similarity=0.170 Sum_probs=66.2
Q ss_pred CCCCCCEEEEECCcc-cHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCc-----c-c-cCc
Q 018346 126 RLEDGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE-----M-E-ASY 197 (357)
Q Consensus 126 ~~~~~~~vLDiGcG~-G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~-----~-~-~~f 197 (357)
.+.++.+||-+|+|. |..+..+++...+.+|+++|.|++.++.+++ .|.+. ++..+- +.. . . ..+
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~----lGa~~--~i~~~~-~~~~~v~~~t~g~g~ 240 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALARE----VGADA--AVKSGA-GAADAIRELTGGQGA 240 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH----TTCSE--EEECST-THHHHHHHHHGGGCE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCCCE--EEcCCC-cHHHHHHHHhCCCCC
Confidence 567899999999875 7788888887656899999999998776654 45432 222111 111 0 1 369
Q ss_pred cEEEEcccccchhhHHHHHHHHHHhcccCceEEEEe
Q 018346 198 DRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 198 D~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
|+|+-...- ...++.+.++|+|+|++++.-
T Consensus 241 d~v~d~~G~------~~~~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 241 TAVFDFVGA------QSTIDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp EEEEESSCC------HHHHHHHHHHEEEEEEEEECS
T ss_pred eEEEECCCC------HHHHHHHHHHHhcCCEEEEEC
Confidence 998865432 346788889999999988753
No 333
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=95.66 E-value=0.025 Score=52.43 Aligned_cols=100 Identities=12% Similarity=0.031 Sum_probs=67.0
Q ss_pred HHHHcCCCCCCEEEEECCcc-cHHHHHHHHHCCCc-EEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEecc--CCCc----
Q 018346 121 YCERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADI--STFE---- 192 (357)
Q Consensus 121 l~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~p~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~--~~~~---- 192 (357)
+.+...+.++.+||-+|+|. |..+..+++.. ++ +|+++|.|++.++.+++ .|.+. ++..+- .++.
T Consensus 183 l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~----lGa~~--vi~~~~~~~~~~~~i~ 255 (373)
T 1p0f_A 183 AVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAA-GASRIIGVGTHKDKFPKAIE----LGATE--CLNPKDYDKPIYEVIC 255 (373)
T ss_dssp HHTTTCCCTTCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECSCGGGHHHHHH----TTCSE--EECGGGCSSCHHHHHH
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEECCCHHHHHHHHH----cCCcE--EEecccccchHHHHHH
Confidence 33456778899999999874 77788888876 66 89999999998776653 45431 121110 1110
Q ss_pred --cccCccEEEEcccccchhhHHHHHHHHHHhcccC-ceEEEEe
Q 018346 193 --MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKED-TLLFVHH 233 (357)
Q Consensus 193 --~~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~ 233 (357)
..+.+|+|+-...- ...+..+.++|+|+ |++++.-
T Consensus 256 ~~t~gg~Dvvid~~g~------~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 256 EKTNGGVDYAVECAGR------IETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp HHTTSCBSEEEECSCC------HHHHHHHHHTBCTTTCEEEECC
T ss_pred HHhCCCCCEEEECCCC------HHHHHHHHHHHhcCCCEEEEEc
Confidence 01369999865332 34577888999999 9987643
No 334
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=95.62 E-value=0.045 Score=49.74 Aligned_cols=96 Identities=20% Similarity=0.262 Sum_probs=65.0
Q ss_pred HHHHcCCCCCCEEEEECC--cccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCC-Ccc----
Q 018346 121 YCERSRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADIST-FEM---- 193 (357)
Q Consensus 121 l~~~~~~~~~~~vLDiGc--G~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~-~~~---- 193 (357)
+.+...+.++.+||-.|| |.|..+..+++.. +++|+++|.+++.++.++ ..|.+ . ..|..+ ...
T Consensus 137 l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~----~~g~~-~---~~d~~~~~~~~~~~ 207 (333)
T 1v3u_A 137 LLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLK-GCKVVGAAGSDEKIAYLK----QIGFD-A---AFNYKTVNSLEEAL 207 (333)
T ss_dssp HHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHH----HTTCS-E---EEETTSCSCHHHHH
T ss_pred HHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHH----hcCCc-E---EEecCCHHHHHHHH
Confidence 335567788999999998 5666777777665 789999999998776663 23432 1 124332 110
Q ss_pred ----ccCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEE
Q 018346 194 ----EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 194 ----~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 232 (357)
.+.+|+|+.+..- ..+..+.++|+|||++++.
T Consensus 208 ~~~~~~~~d~vi~~~g~-------~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 208 KKASPDGYDCYFDNVGG-------EFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp HHHCTTCEEEEEESSCH-------HHHHHHHTTEEEEEEEEEC
T ss_pred HHHhCCCCeEEEECCCh-------HHHHHHHHHHhcCCEEEEE
Confidence 1368999876542 2467788999999998764
No 335
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.60 E-value=0.032 Score=51.69 Aligned_cols=97 Identities=12% Similarity=0.042 Sum_probs=66.6
Q ss_pred HHHcCCCCCCEEEEECCcc-cHHHHHHHHHCCCc-EEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCC----Cc---
Q 018346 122 CERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADIST----FE--- 192 (357)
Q Consensus 122 ~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~p~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~----~~--- 192 (357)
.+...+.++.+||-+|+|. |..+..+++.. ++ +|+++|.|++.++.+++ .|.+. .+ |..+ +.
T Consensus 188 ~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~----lGa~~--vi--~~~~~~~~~~~~v 258 (376)
T 1e3i_A 188 INTAKVTPGSTCAVFGLGCVGLSAIIGCKIA-GASRIIAIDINGEKFPKAKA----LGATD--CL--NPRELDKPVQDVI 258 (376)
T ss_dssp HTTSCCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHH----TTCSE--EE--CGGGCSSCHHHHH
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHH----hCCcE--EE--ccccccchHHHHH
Confidence 3456778899999999873 77888888876 66 89999999998776643 45431 12 2211 10
Q ss_pred ---cccCccEEEEcccccchhhHHHHHHHHHHhcccC-ceEEEEe
Q 018346 193 ---MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKED-TLLFVHH 233 (357)
Q Consensus 193 ---~~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~ 233 (357)
..+.+|+|+-...- ...+..+.+.|+++ |++++.-
T Consensus 259 ~~~~~~g~Dvvid~~G~------~~~~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 259 TELTAGGVDYSLDCAGT------AQTLKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp HHHHTSCBSEEEESSCC------HHHHHHHHHTBCTTTCEEEECC
T ss_pred HHHhCCCccEEEECCCC------HHHHHHHHHHhhcCCCEEEEEC
Confidence 01369998865332 34677888999999 9987643
No 336
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.59 E-value=0.034 Score=51.32 Aligned_cols=98 Identities=19% Similarity=0.109 Sum_probs=67.1
Q ss_pred HHcCCCCCCEEEEECCcc-cHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCc------cc-
Q 018346 123 ERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE------ME- 194 (357)
Q Consensus 123 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~------~~- 194 (357)
+...+.++.+||-+|+|. |..+..+++.. +++|+++|.+++.++.+++ .|.+. .+..+-.++. ..
T Consensus 183 ~~~~~~~g~~VlV~G~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~----lGa~~--vi~~~~~~~~~~v~~~~~g 255 (363)
T 3uog_A 183 EKGHLRAGDRVVVQGTGGVALFGLQIAKAT-GAEVIVTSSSREKLDRAFA----LGADH--GINRLEEDWVERVYALTGD 255 (363)
T ss_dssp TTTCCCTTCEEEEESSBHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHH----HTCSE--EEETTTSCHHHHHHHHHTT
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEecCchhHHHHHH----cCCCE--EEcCCcccHHHHHHHHhCC
Confidence 456678899999999875 77888888876 7899999999987776654 45431 2222211111 01
Q ss_pred cCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEec
Q 018346 195 ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 195 ~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
..+|+|+-...- ..+..+.++|+|+|.+++.-.
T Consensus 256 ~g~D~vid~~g~-------~~~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 256 RGADHILEIAGG-------AGLGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp CCEEEEEEETTS-------SCHHHHHHHEEEEEEEEEECC
T ss_pred CCceEEEECCCh-------HHHHHHHHHhhcCCEEEEEec
Confidence 369999875441 245677889999999887543
No 337
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=95.58 E-value=0.031 Score=51.12 Aligned_cols=94 Identities=15% Similarity=0.202 Sum_probs=63.4
Q ss_pred CCCCCCEEEEECCcc-cHHHHHHHHHC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEe----ccC-CCccccCcc
Q 018346 126 RLEDGHTVLDVGCGW-GSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVA----DIS-TFEMEASYD 198 (357)
Q Consensus 126 ~~~~~~~vLDiGcG~-G~~~~~la~~~-p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~----d~~-~~~~~~~fD 198 (357)
.+ ++.+||-+|+|. |..+..+++.. |+++|+++|.|++.++.+++ .|.+. ++.. |.. .......+|
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~----lGa~~--vi~~~~~~~~~~~~~~g~g~D 240 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALE----LGADY--VSEMKDAESLINKLTDGLGAS 240 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH----HTCSE--EECHHHHHHHHHHHHTTCCEE
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH----hCCCE--EeccccchHHHHHhhcCCCcc
Confidence 67 899999999964 67777788764 47899999999998776654 34422 1211 110 111012699
Q ss_pred EEEEcccccchhhHHHHHHHHHHhcccCceEEEE
Q 018346 199 RIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 199 ~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 232 (357)
+|+....- ...++.+.++|+|+|+++..
T Consensus 241 ~vid~~g~------~~~~~~~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 241 IAIDLVGT------EETTYNLGKLLAQEGAIILV 268 (344)
T ss_dssp EEEESSCC------HHHHHHHHHHEEEEEEEEEC
T ss_pred EEEECCCC------hHHHHHHHHHhhcCCEEEEe
Confidence 99875432 34577888999999998774
No 338
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=95.52 E-value=0.025 Score=51.44 Aligned_cols=75 Identities=7% Similarity=0.084 Sum_probs=56.4
Q ss_pred CCCEEEEECCcccHHHHHHHHHC-CCcEE-EEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc----cCccEEEE
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY-SNCKI-TGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME----ASYDRIYS 202 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~-p~~~v-~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~----~~fD~Ii~ 202 (357)
...+++|+.||.|.++..+.... +...| .++|+++.+.+..+.|... . ++.+|+.++... ..+|+++.
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~-----~-~~~~DI~~~~~~~i~~~~~Dil~g 82 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKE-----E-VQVKNLDSISIKQIESLNCNTWFM 82 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC-----C-CBCCCTTTCCHHHHHHTCCCEEEE
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC-----C-cccCChhhcCHHHhccCCCCEEEe
Confidence 35699999999999999998763 11346 6999999998888887632 1 567888876432 26999999
Q ss_pred cccccch
Q 018346 203 IEMFEHM 209 (357)
Q Consensus 203 ~~~~~~~ 209 (357)
.++-+.+
T Consensus 83 gpPCQ~f 89 (327)
T 3qv2_A 83 SPPCQPY 89 (327)
T ss_dssp CCCCTTC
T ss_pred cCCccCc
Confidence 8875554
No 339
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=95.50 E-value=0.025 Score=51.65 Aligned_cols=74 Identities=9% Similarity=0.139 Sum_probs=55.4
Q ss_pred CEEEEECCcccHHHHHHHHHCCC-cEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc----cCccEEEEccc
Q 018346 131 HTVLDVGCGWGSLSLYIAQKYSN-CKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME----ASYDRIYSIEM 205 (357)
Q Consensus 131 ~~vLDiGcG~G~~~~~la~~~p~-~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~----~~fD~Ii~~~~ 205 (357)
.+++|+.||.|.++..+....-+ ..|.++|+++.+.+..+.|.. ...++.+|+.++... ..+|+++..++
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~-----~~~~~~~DI~~~~~~~~~~~~~D~l~ggpP 78 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFP-----ETNLLNRNIQQLTPQVIKKWNVDTILMSPP 78 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT-----TSCEECCCGGGCCHHHHHHTTCCEEEECCC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCC-----CCceeccccccCCHHHhccCCCCEEEecCC
Confidence 58999999999999999877311 347799999998877777653 334577888876432 26999998886
Q ss_pred ccch
Q 018346 206 FEHM 209 (357)
Q Consensus 206 ~~~~ 209 (357)
-+.+
T Consensus 79 CQ~f 82 (333)
T 4h0n_A 79 CQPF 82 (333)
T ss_dssp CCCS
T ss_pred Ccch
Confidence 5443
No 340
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.49 E-value=0.051 Score=50.24 Aligned_cols=97 Identities=14% Similarity=0.152 Sum_probs=66.4
Q ss_pred HHHcCCCCCCEEEEECCcc-cHHHHHHHHHCCCc-EEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCC----Cc---
Q 018346 122 CERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADIST----FE--- 192 (357)
Q Consensus 122 ~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~p~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~----~~--- 192 (357)
.+..++.++.+||-+|+|. |..+..+++.. ++ +|+++|.|++.++.+++ .|.+. ++ |..+ +.
T Consensus 183 ~~~~~~~~g~~VlV~GaG~vG~~avqla~~~-Ga~~Vi~~~~~~~~~~~~~~----lGa~~--vi--~~~~~~~~~~~~v 253 (373)
T 2fzw_A 183 VNTAKLEPGSVCAVFGLGGVGLAVIMGCKVA-GASRIIGVDINKDKFARAKE----FGATE--CI--NPQDFSKPIQEVL 253 (373)
T ss_dssp HTTTCCCTTCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECSCGGGHHHHHH----HTCSE--EE--CGGGCSSCHHHHH
T ss_pred HhhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHH----cCCce--Ee--ccccccccHHHHH
Confidence 3456678899999999874 77788888776 66 89999999998777654 35421 12 2211 10
Q ss_pred --c-ccCccEEEEcccccchhhHHHHHHHHHHhcccC-ceEEEEe
Q 018346 193 --M-EASYDRIYSIEMFEHMKNYQNLLKKISKWMKED-TLLFVHH 233 (357)
Q Consensus 193 --~-~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~ 233 (357)
. .+.+|+|+-...- ...++.+.+.|+|+ |++++.-
T Consensus 254 ~~~~~~g~D~vid~~g~------~~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 254 IEMTDGGVDYSFECIGN------VKVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp HHHTTSCBSEEEECSCC------HHHHHHHHHTBCTTTCEEEECS
T ss_pred HHHhCCCCCEEEECCCc------HHHHHHHHHhhccCCcEEEEEe
Confidence 0 1369999865432 34577888999999 9987743
No 341
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.47 E-value=0.054 Score=50.11 Aligned_cols=96 Identities=11% Similarity=0.122 Sum_probs=66.1
Q ss_pred HHHcCCCCCCEEEEECCcc-cHHHHHHHHHCCCc-EEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCC----Cc---
Q 018346 122 CERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADIST----FE--- 192 (357)
Q Consensus 122 ~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~p~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~----~~--- 192 (357)
.+...+.++.+||-+|+|. |..+..+++.. ++ +|+++|.+++.++.+++ .|.+. ++ |..+ +.
T Consensus 184 ~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~~----lGa~~--vi--~~~~~~~~~~~~~ 254 (374)
T 2jhf_A 184 VKVAKVTQGSTCAVFGLGGVGLSVIMGCKAA-GAARIIGVDINKDKFAKAKE----VGATE--CV--NPQDYKKPIQEVL 254 (374)
T ss_dssp HTTTCCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHH----TTCSE--EE--CGGGCSSCHHHHH
T ss_pred HhccCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHH----hCCce--Ee--cccccchhHHHHH
Confidence 3456678899999999874 77888888876 66 89999999998776643 45421 12 2211 10
Q ss_pred ---cccCccEEEEcccccchhhHHHHHHHHHHhcccC-ceEEEE
Q 018346 193 ---MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKED-TLLFVH 232 (357)
Q Consensus 193 ---~~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~ 232 (357)
..+.+|+|+-...- ...+..+.++|+++ |++++.
T Consensus 255 ~~~~~~g~D~vid~~g~------~~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 255 TEMSNGGVDFSFEVIGR------LDTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp HHHTTSCBSEEEECSCC------HHHHHHHHHHBCTTTCEEEEC
T ss_pred HHHhCCCCcEEEECCCC------HHHHHHHHHHhhcCCcEEEEe
Confidence 01369998865432 34577888999999 998764
No 342
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=95.45 E-value=0.1 Score=48.39 Aligned_cols=81 Identities=9% Similarity=0.108 Sum_probs=51.0
Q ss_pred HcCCCCCCEEEEECCcccHHHHHHHHHC-------CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccccC
Q 018346 124 RSRLEDGHTVLDVGCGWGSLSLYIAQKY-------SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEAS 196 (357)
Q Consensus 124 ~~~~~~~~~vLDiGcG~G~~~~~la~~~-------p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 196 (357)
..+...+..|+|+|.|.|.++..+.+.. ...+++.||+|+...+.-++.+... ++|.+. .++.+++ ..
T Consensus 75 ~~g~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~--~~v~W~-~~l~~lp--~~ 149 (387)
T 1zkd_A 75 AADEPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGI--RNIHWH-DSFEDVP--EG 149 (387)
T ss_dssp HTTCCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTC--SSEEEE-SSGGGSC--CS
T ss_pred HcCCCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcCC--CCeEEe-CChhhcC--CC
Confidence 3444455689999999999988776542 2358999999998766555444332 256654 2333333 12
Q ss_pred ccEEEEcccccch
Q 018346 197 YDRIYSIEMFEHM 209 (357)
Q Consensus 197 fD~Ii~~~~~~~~ 209 (357)
.=+|++|.+++.+
T Consensus 150 ~~~viANE~fDAl 162 (387)
T 1zkd_A 150 PAVILANEYFDVL 162 (387)
T ss_dssp SEEEEEESSGGGS
T ss_pred CeEEEeccccccC
Confidence 3467777766544
No 343
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=95.43 E-value=0.049 Score=49.52 Aligned_cols=101 Identities=18% Similarity=0.242 Sum_probs=68.5
Q ss_pred HHHHHHHcCCCCCCEEEEECC--cccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc--
Q 018346 118 LELYCERSRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-- 193 (357)
Q Consensus 118 l~~l~~~~~~~~~~~vLDiGc--G~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-- 193 (357)
+..+.+...+.++.+||-.|+ |.|..+..+++.. +++|+++|.+++.++.+.+ ..|.+ . .+ |..+...
T Consensus 138 ~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~---~~g~~-~-~~--~~~~~~~~~ 209 (336)
T 4b7c_A 138 YFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLK-GCRVVGIAGGAEKCRFLVE---ELGFD-G-AI--DYKNEDLAA 209 (336)
T ss_dssp HHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH---TTCCS-E-EE--ETTTSCHHH
T ss_pred HHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH---HcCCC-E-EE--ECCCHHHHH
Confidence 333446677889999999998 4677888888776 7899999999987665522 23442 1 11 2222111
Q ss_pred ------ccCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEe
Q 018346 194 ------EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 194 ------~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
.+.+|+|+.+..- ..+..+.+.|+++|++++.-
T Consensus 210 ~~~~~~~~~~d~vi~~~g~-------~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 210 GLKRECPKGIDVFFDNVGG-------EILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp HHHHHCTTCEEEEEESSCH-------HHHHHHHTTEEEEEEEEECC
T ss_pred HHHHhcCCCceEEEECCCc-------chHHHHHHHHhhCCEEEEEe
Confidence 1359998875431 36788889999999988743
No 344
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=95.35 E-value=0.058 Score=49.19 Aligned_cols=97 Identities=15% Similarity=0.200 Sum_probs=66.0
Q ss_pred HHHHcCCCCCCEEEEECC--cccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCC---Ccc--
Q 018346 121 YCERSRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADIST---FEM-- 193 (357)
Q Consensus 121 l~~~~~~~~~~~vLDiGc--G~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~---~~~-- 193 (357)
+.+...+.++.+||-.|+ |.|..+..+++.. +++|+++|.+++.++.+++ ..|.+ . .+ |..+ +..
T Consensus 147 l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~---~~g~~-~-~~--d~~~~~~~~~~~ 218 (345)
T 2j3h_A 147 FYEVCSPKEGETVYVSAASGAVGQLVGQLAKMM-GCYVVGSAGSKEKVDLLKT---KFGFD-D-AF--NYKEESDLTAAL 218 (345)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH---TSCCS-E-EE--ETTSCSCSHHHH
T ss_pred HHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH---HcCCc-e-EE--ecCCHHHHHHHH
Confidence 334567788999999997 5677777888766 7899999999987666542 23432 1 11 3322 110
Q ss_pred ----ccCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEE
Q 018346 194 ----EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 194 ----~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 232 (357)
.+.+|+|+.+..- ..+..+.++|+|||++++.
T Consensus 219 ~~~~~~~~d~vi~~~g~-------~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 219 KRCFPNGIDIYFENVGG-------KMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp HHHCTTCEEEEEESSCH-------HHHHHHHTTEEEEEEEEEC
T ss_pred HHHhCCCCcEEEECCCH-------HHHHHHHHHHhcCCEEEEE
Confidence 1358998876431 3677888999999998774
No 345
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=95.34 E-value=0.04 Score=49.41 Aligned_cols=123 Identities=15% Similarity=0.136 Sum_probs=68.6
Q ss_pred CCHHHHHHHHHHH--HHHHcCCCCCCEEEEECCcccHHHHHHH----HHCCCc--EEEEEcCCH--------HHHHH-HH
Q 018346 108 KTLEDAEKAMLEL--YCERSRLEDGHTVLDVGCGWGSLSLYIA----QKYSNC--KITGICNSK--------TQKEF-IE 170 (357)
Q Consensus 108 ~~l~~~~~~~l~~--l~~~~~~~~~~~vLDiGcG~G~~~~~la----~~~p~~--~v~~vD~s~--------~~l~~-a~ 170 (357)
..+.++....+.. +.++....+..+|||+|-|+|....... +..|.. +++.+|..+ +.... ..
T Consensus 73 GAl~Es~hVFi~~~~L~~r~~~~~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~ 152 (308)
T 3vyw_A 73 GAIRESLYKFVRPSRILEKAKERKVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHE 152 (308)
T ss_dssp CHHHHHHHHTHHHHTHHHHHHHCSEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHH
T ss_pred cHHHHHHHHHhccCCchHHhcCCCCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHH
Confidence 3466665544432 2222222345689999999998654332 234555 456666321 11111 11
Q ss_pred HHHHHc---CCC--CeEEEEeccCCCcc--c-cCccEEEEcccccchhh----HHHHHHHHHHhcccCceEEE
Q 018346 171 EQCRVL---ELQ--NVEIIVADISTFEM--E-ASYDRIYSIEMFEHMKN----YQNLLKKISKWMKEDTLLFV 231 (357)
Q Consensus 171 ~~~~~~---~~~--~v~~~~~d~~~~~~--~-~~fD~Ii~~~~~~~~~~----~~~~l~~~~~~LkpgG~l~~ 231 (357)
...... ... .+++..+|+.+... . .++|+|+..+- ..-.+ -..+++.+.++++|||++.-
T Consensus 153 ~l~~~~p~~~~~~v~L~l~~GDa~~~l~~l~~~~~Da~flDgF-sP~kNPeLWs~e~f~~l~~~~~pgg~laT 224 (308)
T 3vyw_A 153 FLLERVPEYEGERLSLKVLLGDARKRIKEVENFKADAVFHDAF-SPYKNPELWTLDFLSLIKERIDEKGYWVS 224 (308)
T ss_dssp HHHHHCSEEECSSEEEEEEESCHHHHGGGCCSCCEEEEEECCS-CTTTSGGGGSHHHHHHHHTTEEEEEEEEE
T ss_pred HHHHhCccccCCcEEEEEEechHHHHHhhhcccceeEEEeCCC-CcccCcccCCHHHHHHHHHHhCCCcEEEE
Confidence 112211 111 35678888866322 2 36999998652 11111 26799999999999998764
No 346
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=95.29 E-value=0.027 Score=52.03 Aligned_cols=96 Identities=18% Similarity=0.287 Sum_probs=65.7
Q ss_pred HHcCCC-----CCCEEEEEC-Cc-ccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCC-Cc--
Q 018346 123 ERSRLE-----DGHTVLDVG-CG-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADIST-FE-- 192 (357)
Q Consensus 123 ~~~~~~-----~~~~vLDiG-cG-~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~-~~-- 192 (357)
+...+. ++.+||=+| +| .|..+..+++...+++|+++|.+++.++.+++ .|.+.+ + |..+ +.
T Consensus 160 ~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~----lGad~v--i--~~~~~~~~~ 231 (363)
T 4dvj_A 160 DRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS----LGAHHV--I--DHSKPLAAE 231 (363)
T ss_dssp TTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH----TTCSEE--E--CTTSCHHHH
T ss_pred HhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH----cCCCEE--E--eCCCCHHHH
Confidence 445565 788999998 54 58888899987447899999999987776654 454311 1 2111 10
Q ss_pred ----cccCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEE
Q 018346 193 ----MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 193 ----~~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 232 (357)
..+.+|+|+-... -...++.+.++|+|+|++++.
T Consensus 232 v~~~~~~g~Dvvid~~g------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 232 VAALGLGAPAFVFSTTH------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp HHTTCSCCEEEEEECSC------HHHHHHHHHHHSCTTCEEEEC
T ss_pred HHHhcCCCceEEEECCC------chhhHHHHHHHhcCCCEEEEE
Confidence 1146898886432 235678888999999998875
No 347
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=95.17 E-value=0.025 Score=52.46 Aligned_cols=100 Identities=12% Similarity=0.113 Sum_probs=67.3
Q ss_pred HHHHcCCCCCCEEEEECCc-ccHHHHHHHHHCCCc-EEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEec--cCCCc----
Q 018346 121 YCERSRLEDGHTVLDVGCG-WGSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVAD--ISTFE---- 192 (357)
Q Consensus 121 l~~~~~~~~~~~vLDiGcG-~G~~~~~la~~~p~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d--~~~~~---- 192 (357)
+.+...+.++.+||-+|+| .|..+..+++.. ++ +|+++|.+++.++.++ ..|.+. ++... -.++.
T Consensus 185 l~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~-Ga~~Vi~~~~~~~~~~~a~----~lGa~~--vi~~~~~~~~~~~~i~ 257 (378)
T 3uko_A 185 VWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTA-GASRIIGIDIDSKKYETAK----KFGVNE--FVNPKDHDKPIQEVIV 257 (378)
T ss_dssp HHTTTCCCTTCCEEEECCSHHHHHHHHHHHHH-TCSCEEEECSCTTHHHHHH----TTTCCE--EECGGGCSSCHHHHHH
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHH----HcCCcE--EEccccCchhHHHHHH
Confidence 3455677889999999997 477888888876 66 8999999998777654 345432 12111 01110
Q ss_pred --cccCccEEEEcccccchhhHHHHHHHHHHhcccC-ceEEEEe
Q 018346 193 --MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKED-TLLFVHH 233 (357)
Q Consensus 193 --~~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~ 233 (357)
..+.+|+|+-...- ...++.+.+.|+|| |++++.-
T Consensus 258 ~~~~gg~D~vid~~g~------~~~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 258 DLTDGGVDYSFECIGN------VSVMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp HHTTSCBSEEEECSCC------HHHHHHHHHTBCTTTCEEEECS
T ss_pred HhcCCCCCEEEECCCC------HHHHHHHHHHhhccCCEEEEEc
Confidence 01369999865332 35678888999997 9987754
No 348
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=95.13 E-value=0.04 Score=50.47 Aligned_cols=97 Identities=13% Similarity=0.193 Sum_probs=65.1
Q ss_pred HHHHcCCC------CCCEEEEEC-Cc-ccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCC-C
Q 018346 121 YCERSRLE------DGHTVLDVG-CG-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADIST-F 191 (357)
Q Consensus 121 l~~~~~~~------~~~~vLDiG-cG-~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~-~ 191 (357)
+.+...+. ++.+||-+| +| .|..+..+++.. +++|+++|.+++.++.+++ .|.+.+ + |..+ +
T Consensus 136 l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~----lGa~~v--i--~~~~~~ 206 (346)
T 3fbg_A 136 LFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAY-GLRVITTASRNETIEWTKK----MGADIV--L--NHKESL 206 (346)
T ss_dssp HHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEECCSHHHHHHHHH----HTCSEE--E--CTTSCH
T ss_pred HHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHh----cCCcEE--E--ECCccH
Confidence 33455666 789999994 44 577888888876 7899999999988777665 344311 1 2111 1
Q ss_pred c------cccCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEE
Q 018346 192 E------MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 192 ~------~~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 232 (357)
. ....+|+|+.... ....+..+.++|+|+|+++..
T Consensus 207 ~~~~~~~~~~g~Dvv~d~~g------~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 207 LNQFKTQGIELVDYVFCTFN------TDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp HHHHHHHTCCCEEEEEESSC------HHHHHHHHHHHEEEEEEEEES
T ss_pred HHHHHHhCCCCccEEEECCC------chHHHHHHHHHhccCCEEEEE
Confidence 0 0136998887432 245677888999999998653
No 349
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=95.09 E-value=0.18 Score=46.35 Aligned_cols=97 Identities=20% Similarity=0.309 Sum_probs=66.2
Q ss_pred HHcCCCCCCEEEEEC--CcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCc------cc
Q 018346 123 ERSRLEDGHTVLDVG--CGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE------ME 194 (357)
Q Consensus 123 ~~~~~~~~~~vLDiG--cG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~------~~ 194 (357)
+...+.++.+||-.| .|.|..+..+++.. +++|++++.+++.++.+++ .|.+ ..+..+-.++. ..
T Consensus 157 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~----~Ga~--~~~~~~~~~~~~~~~~~~~ 229 (362)
T 2c0c_A 157 ELGGLSEGKKVLVTAAAGGTGQFAMQLSKKA-KCHVIGTCSSDEKSAFLKS----LGCD--RPINYKTEPVGTVLKQEYP 229 (362)
T ss_dssp HHTCCCTTCEEEETTTTBTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----TTCS--EEEETTTSCHHHHHHHHCT
T ss_pred HhcCCCCCCEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHH----cCCc--EEEecCChhHHHHHHHhcC
Confidence 445678899999999 45788888888876 7899999999887766654 4542 12221111110 01
Q ss_pred cCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEe
Q 018346 195 ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 195 ~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
..+|+|+.+..- ..++.+.++|+++|++++.-
T Consensus 230 ~g~D~vid~~g~-------~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 230 EGVDVVYESVGG-------AMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp TCEEEEEECSCT-------HHHHHHHHHEEEEEEEEECC
T ss_pred CCCCEEEECCCH-------HHHHHHHHHHhcCCEEEEEe
Confidence 358999876431 46778889999999987743
No 350
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=95.04 E-value=0.059 Score=49.26 Aligned_cols=97 Identities=15% Similarity=0.315 Sum_probs=65.5
Q ss_pred HHHcCCCCCCEEEEECC--cccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCC-Ccc-----
Q 018346 122 CERSRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADIST-FEM----- 193 (357)
Q Consensus 122 ~~~~~~~~~~~vLDiGc--G~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~-~~~----- 193 (357)
+....+.++.+||-+|+ |.|..+..+++.. +++|+++|.+++.++.+++ .|.+ . . .|..+ ...
T Consensus 162 l~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~V~~~~~~~~~~~~~~~----~g~~-~-~--~d~~~~~~~~~~~~ 232 (347)
T 2hcy_A 162 LKSANLMAGHWVAISGAAGGLGSLAVQYAKAM-GYRVLGIDGGEGKEELFRS----IGGE-V-F--IDFTKEKDIVGAVL 232 (347)
T ss_dssp HHTTTCCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECSTTHHHHHHH----TTCC-E-E--EETTTCSCHHHHHH
T ss_pred HHhcCCCCCCEEEEECCCchHHHHHHHHHHHC-CCcEEEEcCCHHHHHHHHH----cCCc-e-E--EecCccHhHHHHHH
Confidence 34456778999999998 4677777777765 7899999999887665543 3442 1 1 24331 110
Q ss_pred ---ccCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEe
Q 018346 194 ---EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 194 ---~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
.+.+|+|+.+... ...++.+.+.|+++|+++...
T Consensus 233 ~~~~~~~D~vi~~~g~------~~~~~~~~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 233 KATDGGAHGVINVSVS------EAAIEASTRYVRANGTTVLVG 269 (347)
T ss_dssp HHHTSCEEEEEECSSC------HHHHHHHTTSEEEEEEEEECC
T ss_pred HHhCCCCCEEEECCCc------HHHHHHHHHHHhcCCEEEEEe
Confidence 0258999876542 346788889999999987643
No 351
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=95.03 E-value=0.19 Score=45.51 Aligned_cols=95 Identities=11% Similarity=0.087 Sum_probs=64.3
Q ss_pred cCCCCCCEEEEECC--cccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCc-------ccc
Q 018346 125 SRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE-------MEA 195 (357)
Q Consensus 125 ~~~~~~~~vLDiGc--G~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~-------~~~ 195 (357)
..+.++.+||-+|+ |.|..+..+++.. +++|+++|.+++.++.+++ .|.+ ..+..+-.+.. ...
T Consensus 144 ~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----~ga~--~~~~~~~~~~~~~~~~~~~~~ 216 (334)
T 3qwb_A 144 YHVKKGDYVLLFAAAGGVGLILNQLLKMK-GAHTIAVASTDEKLKIAKE----YGAE--YLINASKEDILRQVLKFTNGK 216 (334)
T ss_dssp SCCCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----TTCS--EEEETTTSCHHHHHHHHTTTS
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----cCCc--EEEeCCCchHHHHHHHHhCCC
Confidence 46778999999994 4677888888776 7899999999987776644 4432 12221111110 013
Q ss_pred CccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEe
Q 018346 196 SYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 196 ~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
.+|+|+.+..- ..++.+.++|+|||++++.-
T Consensus 217 g~D~vid~~g~-------~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 217 GVDASFDSVGK-------DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp CEEEEEECCGG-------GGHHHHHHHEEEEEEEEECC
T ss_pred CceEEEECCCh-------HHHHHHHHHhccCCEEEEEc
Confidence 69999876542 34677788999999988753
No 352
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=94.94 E-value=0.026 Score=51.61 Aligned_cols=96 Identities=20% Similarity=0.308 Sum_probs=66.2
Q ss_pred HHcCCCCCCEEEEECC--cccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCc------cc
Q 018346 123 ERSRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE------ME 194 (357)
Q Consensus 123 ~~~~~~~~~~vLDiGc--G~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~------~~ 194 (357)
+...+.++.+||-.|+ |.|..+..+++.. +++|++++.+++.++.+++ .|.+. ++..+ .++. ..
T Consensus 153 ~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----~ga~~--v~~~~-~~~~~~v~~~~~ 224 (342)
T 4eye_A 153 RRGQLRAGETVLVLGAAGGIGTAAIQIAKGM-GAKVIAVVNRTAATEFVKS----VGADI--VLPLE-EGWAKAVREATG 224 (342)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHH----HTCSE--EEESS-TTHHHHHHHHTT
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHh----cCCcE--EecCc-hhHHHHHHHHhC
Confidence 5566788999999997 4678888888876 7899999999988776655 34422 22222 2211 01
Q ss_pred -cCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEe
Q 018346 195 -ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 195 -~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
..+|+|+.+..- ..+..+.++|+++|++++.-
T Consensus 225 ~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 225 GAGVDMVVDPIGG-------PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp TSCEEEEEESCC---------CHHHHHHTEEEEEEEEEC-
T ss_pred CCCceEEEECCch-------hHHHHHHHhhcCCCEEEEEE
Confidence 369999876542 24667888999999988753
No 353
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=94.92 E-value=0.12 Score=47.09 Aligned_cols=96 Identities=20% Similarity=0.280 Sum_probs=64.4
Q ss_pred HHcCCCCCCEEEEECCc--ccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCc--------
Q 018346 123 ERSRLEDGHTVLDVGCG--WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE-------- 192 (357)
Q Consensus 123 ~~~~~~~~~~vLDiGcG--~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~-------- 192 (357)
....+.++.+||-.|+| .|..+..+++..++++|+++|.+++.++.+++ .|.+ . ++ |..+..
T Consensus 164 ~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~----~g~~-~-~~--~~~~~~~~~~~~~~ 235 (347)
T 1jvb_A 164 RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR----AGAD-Y-VI--NASMQDPLAEIRRI 235 (347)
T ss_dssp HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH----HTCS-E-EE--ETTTSCHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCCC-E-Ee--cCCCccHHHHHHHH
Confidence 45677889999999987 45566666665436799999999988776643 3432 1 11 222211
Q ss_pred cc-cCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEE
Q 018346 193 ME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 193 ~~-~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 232 (357)
.. +.+|+|+.+..- ...++.+.++|+|+|++++.
T Consensus 236 ~~~~~~d~vi~~~g~------~~~~~~~~~~l~~~G~iv~~ 270 (347)
T 1jvb_A 236 TESKGVDAVIDLNNS------EKTLSVYPKALAKQGKYVMV 270 (347)
T ss_dssp TTTSCEEEEEESCCC------HHHHTTGGGGEEEEEEEEEC
T ss_pred hcCCCceEEEECCCC------HHHHHHHHHHHhcCCEEEEE
Confidence 11 368998876432 34567788899999998774
No 354
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=94.92 E-value=0.06 Score=49.45 Aligned_cols=95 Identities=15% Similarity=0.182 Sum_probs=62.4
Q ss_pred HHcCCCCC------CEEEEECCc-ccHHH-HHHH-HHCCCcE-EEEEcCCHH---HHHHHHHHHHHcCCCCeEEEEeccC
Q 018346 123 ERSRLEDG------HTVLDVGCG-WGSLS-LYIA-QKYSNCK-ITGICNSKT---QKEFIEEQCRVLELQNVEIIVADIS 189 (357)
Q Consensus 123 ~~~~~~~~------~~vLDiGcG-~G~~~-~~la-~~~p~~~-v~~vD~s~~---~l~~a~~~~~~~~~~~v~~~~~d~~ 189 (357)
+...+.++ .+||-+|+| .|..+ ..++ +.. +++ |+++|.+++ .++.+++ .|. +.+ |..
T Consensus 160 ~~~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~-Ga~~Vi~~~~~~~~~~~~~~~~~----lGa---~~v--~~~ 229 (357)
T 2b5w_A 160 EHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDK-GYENLYCLGRRDRPDPTIDIIEE----LDA---TYV--DSR 229 (357)
T ss_dssp HHHHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTT-CCCEEEEEECCCSSCHHHHHHHH----TTC---EEE--ETT
T ss_pred HhcCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHc-CCcEEEEEeCCcccHHHHHHHHH----cCC---ccc--CCC
Confidence 34455677 999999985 36677 7778 665 666 999999887 6666643 443 222 332
Q ss_pred CCcc------ccCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEe
Q 018346 190 TFEM------EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 190 ~~~~------~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
+... .+.+|+|+-...- ...++.+.++|+|+|+++..-
T Consensus 230 ~~~~~~i~~~~gg~Dvvid~~g~------~~~~~~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 230 QTPVEDVPDVYEQMDFIYEATGF------PKHAIQSVQALAPNGVGALLG 273 (357)
T ss_dssp TSCGGGHHHHSCCEEEEEECSCC------HHHHHHHHHHEEEEEEEEECC
T ss_pred ccCHHHHHHhCCCCCEEEECCCC------hHHHHHHHHHHhcCCEEEEEe
Confidence 2111 1268988864331 245778889999999987743
No 355
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=94.88 E-value=0.045 Score=50.03 Aligned_cols=102 Identities=9% Similarity=0.050 Sum_probs=63.7
Q ss_pred HHHcCCCCCCEEEEECCcc-cHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCC-eEEEEeccCCCc--c--cc
Q 018346 122 CERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQN-VEIIVADISTFE--M--EA 195 (357)
Q Consensus 122 ~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~-v~~~~~d~~~~~--~--~~ 195 (357)
++.....++.+||=+|+|. |..+..+++...+++|+++|.+++.++.+++ .|.+. +.....|..+.. . ..
T Consensus 156 l~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~----~Ga~~~i~~~~~~~~~~v~~~t~g~ 231 (348)
T 4eez_A 156 IKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKK----IGADVTINSGDVNPVDEIKKITGGL 231 (348)
T ss_dssp HHHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHH----TTCSEEEEC-CCCHHHHHHHHTTSS
T ss_pred ecccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhh----cCCeEEEeCCCCCHHHHhhhhcCCC
Confidence 4556778899999999986 4566666666557899999999987655543 45421 111111211100 0 12
Q ss_pred CccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEe
Q 018346 196 SYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 196 ~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
.+|.++....- ...+....+.|+++|.+++.-
T Consensus 232 g~d~~~~~~~~------~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 232 GVQSAIVCAVA------RIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp CEEEEEECCSC------HHHHHHHHHTEEEEEEEEECC
T ss_pred CceEEEEeccC------cchhheeheeecCCceEEEEe
Confidence 46666654321 456778889999999987753
No 356
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.81 E-value=0.17 Score=45.76 Aligned_cols=94 Identities=9% Similarity=0.106 Sum_probs=63.5
Q ss_pred HcCCCCCCEEEEECC--cccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc--------
Q 018346 124 RSRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-------- 193 (357)
Q Consensus 124 ~~~~~~~~~vLDiGc--G~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-------- 193 (357)
..++.++.+||-.|+ |.|..+..+++.. +++|+++|.+++.++.+++ .|.+ . . .|..+...
T Consensus 135 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~----~g~~-~-~--~~~~~~~~~~~~~~~~ 205 (327)
T 1qor_A 135 TYEIKPDEQFLFHAAAGGVGLIACQWAKAL-GAKLIGTVGTAQKAQSALK----AGAW-Q-V--INYREEDLVERLKEIT 205 (327)
T ss_dssp TSCCCTTCEEEESSTTBHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHH----HTCS-E-E--EETTTSCHHHHHHHHT
T ss_pred hhCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH----cCCC-E-E--EECCCccHHHHHHHHh
Confidence 456778999999993 5666777777655 7899999999987776654 3432 1 1 23222110
Q ss_pred -ccCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEe
Q 018346 194 -EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 194 -~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
...+|+|+.+.. ...++.+.++|+++|++++.-
T Consensus 206 ~~~~~D~vi~~~g-------~~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 206 GGKKVRVVYDSVG-------RDTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp TTCCEEEEEECSC-------GGGHHHHHHTEEEEEEEEECC
T ss_pred CCCCceEEEECCc-------hHHHHHHHHHhcCCCEEEEEe
Confidence 135899987654 134677888999999987643
No 357
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=94.74 E-value=0.15 Score=46.66 Aligned_cols=95 Identities=18% Similarity=0.236 Sum_probs=65.2
Q ss_pred HHcCCCCCCEEEEEC--CcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-------
Q 018346 123 ERSRLEDGHTVLDVG--CGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM------- 193 (357)
Q Consensus 123 ~~~~~~~~~~vLDiG--cG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~------- 193 (357)
+...+.++.+||-.| +|.|..+..+++.. +++|+++|.+++.++.+++ .|.+. .+ |..+...
T Consensus 161 ~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----lGa~~--~~--~~~~~~~~~~~~~~ 231 (353)
T 4dup_A 161 QMAGLTEGESVLIHGGTSGIGTTAIQLARAF-GAEVYATAGSTGKCEACER----LGAKR--GI--NYRSEDFAAVIKAE 231 (353)
T ss_dssp TTTCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----HTCSE--EE--ETTTSCHHHHHHHH
T ss_pred HhcCCCCCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHh----cCCCE--EE--eCCchHHHHHHHHH
Confidence 456678899999995 34677888888776 7899999999998776654 34421 12 2222111
Q ss_pred -ccCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEe
Q 018346 194 -EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 194 -~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
...+|+|+.+..- ..+..+.+.|+|+|.+++.-
T Consensus 232 ~~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 232 TGQGVDIILDMIGA-------AYFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp HSSCEEEEEESCCG-------GGHHHHHHTEEEEEEEEECC
T ss_pred hCCCceEEEECCCH-------HHHHHHHHHhccCCEEEEEE
Confidence 1369999876542 14667788999999987743
No 358
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=94.71 E-value=0.15 Score=46.64 Aligned_cols=95 Identities=14% Similarity=0.148 Sum_probs=64.9
Q ss_pred HHcCCCCCCEEEEECCc-ccHHHHHHHHHCCCc-EEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-------
Q 018346 123 ERSRLEDGHTVLDVGCG-WGSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM------- 193 (357)
Q Consensus 123 ~~~~~~~~~~vLDiGcG-~G~~~~~la~~~p~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~------- 193 (357)
+..++ ++.+||-+|+| .|..+..+++.. ++ +|+++|.+++.++.+++ .|.+. .+ |..+...
T Consensus 162 ~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~----~Ga~~--~~--~~~~~~~~~~v~~~ 231 (348)
T 2d8a_A 162 LAGPI-SGKSVLITGAGPLGLLGIAVAKAS-GAYPVIVSEPSDFRRELAKK----VGADY--VI--NPFEEDVVKEVMDI 231 (348)
T ss_dssp TTSCC-TTCCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHHHHHH----HTCSE--EE--CTTTSCHHHHHHHH
T ss_pred HhcCC-CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHH----hCCCE--EE--CCCCcCHHHHHHHH
Confidence 45667 88999999986 377777888776 67 89999999987776653 34421 12 2221110
Q ss_pred -c-cCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEe
Q 018346 194 -E-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 194 -~-~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
. ..+|+|+..... ...++.+.+.|+++|+++..-
T Consensus 232 ~~g~g~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 232 TDGNGVDVFLEFSGA------PKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp TTTSCEEEEEECSCC------HHHHHHHHHHEEEEEEEEECC
T ss_pred cCCCCCCEEEECCCC------HHHHHHHHHHHhcCCEEEEEc
Confidence 1 259999876432 345778889999999987743
No 359
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=94.63 E-value=0.28 Score=44.85 Aligned_cols=95 Identities=19% Similarity=0.198 Sum_probs=64.3
Q ss_pred HHcCCCCCCEEEEECC--cccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-------
Q 018346 123 ERSRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM------- 193 (357)
Q Consensus 123 ~~~~~~~~~~vLDiGc--G~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~------- 193 (357)
+..++.++.+||-.|+ |.|..+..+++.. +++|++++.+++.++.++ ..|.+ .. .|..+...
T Consensus 164 ~~~~~~~g~~vlV~GasggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~----~~ga~--~~--~d~~~~~~~~~~~~~ 234 (351)
T 1yb5_A 164 HSACVKAGESVLVHGASGGVGLAACQIARAY-GLKILGTAGTEEGQKIVL----QNGAH--EV--FNHREVNYIDKIKKY 234 (351)
T ss_dssp TTSCCCTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHH----HTTCS--EE--EETTSTTHHHHHHHH
T ss_pred HhhCCCCcCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCChhHHHHHH----HcCCC--EE--EeCCCchHHHHHHHH
Confidence 3456788999999997 4677777777765 789999999998776553 33442 11 23222110
Q ss_pred -c-cCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEe
Q 018346 194 -E-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 194 -~-~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
. ..+|+|+.+..- ..+....++|+|+|++++.-
T Consensus 235 ~~~~~~D~vi~~~G~-------~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 235 VGEKGIDIIIEMLAN-------VNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp HCTTCEEEEEESCHH-------HHHHHHHHHEEEEEEEEECC
T ss_pred cCCCCcEEEEECCCh-------HHHHHHHHhccCCCEEEEEe
Confidence 1 269999876431 24667789999999987743
No 360
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=94.59 E-value=0.094 Score=48.62 Aligned_cols=97 Identities=18% Similarity=0.144 Sum_probs=65.4
Q ss_pred HHcC-CCCCCEEEEECCc-ccHHHHHHHHHCCC-cEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEec------cCC-Cc
Q 018346 123 ERSR-LEDGHTVLDVGCG-WGSLSLYIAQKYSN-CKITGICNSKTQKEFIEEQCRVLELQNVEIIVAD------IST-FE 192 (357)
Q Consensus 123 ~~~~-~~~~~~vLDiGcG-~G~~~~~la~~~p~-~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d------~~~-~~ 192 (357)
...+ +.++.+||-+|+| .|..+..+++.. + .+|+++|.|++.++.+++ .|.+. ++..+ +.+ +.
T Consensus 188 ~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~~~~----lGa~~--vi~~~~~~~~~~~~~v~ 260 (380)
T 1vj0_A 188 DEYPESFAGKTVVIQGAGPLGLFGVVIARSL-GAENVIVIAGSPNRLKLAEE----IGADL--TLNRRETSVEERRKAIM 260 (380)
T ss_dssp HTCSSCCBTCEEEEECCSHHHHHHHHHHHHT-TBSEEEEEESCHHHHHHHHH----TTCSE--EEETTTSCHHHHHHHHH
T ss_pred HhcCCCCCCCEEEEECcCHHHHHHHHHHHHc-CCceEEEEcCCHHHHHHHHH----cCCcE--EEeccccCcchHHHHHH
Confidence 4566 7789999999976 477888888876 7 599999999987776653 45432 22211 111 00
Q ss_pred --cc-cCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEE
Q 018346 193 --ME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 193 --~~-~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 232 (357)
.. ..+|+|+-...- ...+..+.++|+|+|+++..
T Consensus 261 ~~~~g~g~Dvvid~~g~------~~~~~~~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 261 DITHGRGADFILEATGD------SRALLEGSELLRRGGFYSVA 297 (380)
T ss_dssp HHTTTSCEEEEEECSSC------TTHHHHHHHHEEEEEEEEEC
T ss_pred HHhCCCCCcEEEECCCC------HHHHHHHHHHHhcCCEEEEE
Confidence 01 269999865432 23567788999999998774
No 361
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=94.54 E-value=0.2 Score=45.21 Aligned_cols=97 Identities=15% Similarity=0.124 Sum_probs=65.2
Q ss_pred HHcCCCCCCEEEEEC-C-cccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCc------cc
Q 018346 123 ERSRLEDGHTVLDVG-C-GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE------ME 194 (357)
Q Consensus 123 ~~~~~~~~~~vLDiG-c-G~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~------~~ 194 (357)
+...+.++.+||-.| + |.|..+..+++.. +++|+++|.+++.++.+++ .|.+ ..+..+-.++. ..
T Consensus 134 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----~Ga~--~~~~~~~~~~~~~~~~~~~ 206 (325)
T 3jyn_A 134 QTYQVKPGEIILFHAAAGGVGSLACQWAKAL-GAKLIGTVSSPEKAAHAKA----LGAW--ETIDYSHEDVAKRVLELTD 206 (325)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHH----HTCS--EEEETTTSCHHHHHHHHTT
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----cCCC--EEEeCCCccHHHHHHHHhC
Confidence 345678899999998 3 4677888888776 7899999999998776654 3432 11221111110 01
Q ss_pred -cCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEe
Q 018346 195 -ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 195 -~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
..+|+|+.+..- ..+..+.++|+|+|++++.-
T Consensus 207 ~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 207 GKKCPVVYDGVGQ-------DTWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp TCCEEEEEESSCG-------GGHHHHHTTEEEEEEEEECC
T ss_pred CCCceEEEECCCh-------HHHHHHHHHhcCCCEEEEEe
Confidence 369999876442 34667788999999988754
No 362
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.45 E-value=0.3 Score=45.61 Aligned_cols=100 Identities=13% Similarity=0.123 Sum_probs=61.1
Q ss_pred CCCCCCEEEEECCcc-cHHHHHHHHHCCCc-EEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCc------cc-cC
Q 018346 126 RLEDGHTVLDVGCGW-GSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE------ME-AS 196 (357)
Q Consensus 126 ~~~~~~~vLDiGcG~-G~~~~~la~~~p~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~------~~-~~ 196 (357)
.+.++.+||=+|+|. |..+..+++.. ++ +|+++|.+++.++.+++ .|.+ .++..+-.++. .. ..
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~~~~----lGa~--~vi~~~~~~~~~~i~~~t~g~g 282 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHA-GASKVILSEPSEVRRNLAKE----LGAD--HVIDPTKENFVEAVLDYTNGLG 282 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCHHHHHHHHH----HTCS--EEECTTTSCHHHHHHHHTTTCC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHH----cCCC--EEEcCCCCCHHHHHHHHhCCCC
Confidence 567899999999864 77888888876 66 99999999998777654 3542 11211111110 01 36
Q ss_pred ccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEe
Q 018346 197 YDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 197 fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
+|+|+-...-.. .....+++.+.+.++++|++++.-
T Consensus 283 ~D~vid~~g~~~-~~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 283 AKLFLEATGVPQ-LVWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp CSEEEECSSCHH-HHHHHHHHHHHHCSCCCCEEEECS
T ss_pred CCEEEECCCCcH-HHHHHHHHHHHhccCCCcEEEEeC
Confidence 999986433210 011222333334449999988753
No 363
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=94.42 E-value=0.069 Score=49.12 Aligned_cols=100 Identities=18% Similarity=0.126 Sum_probs=64.5
Q ss_pred HHcCCCCCCEEEEECCc-ccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccC-CCc--cccCcc
Q 018346 123 ERSRLEDGHTVLDVGCG-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADIS-TFE--MEASYD 198 (357)
Q Consensus 123 ~~~~~~~~~~vLDiGcG-~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~-~~~--~~~~fD 198 (357)
...++.++.+||-+|+| .|..+..+++.. +++|+++|.|++.++.+++ .|.+. ++..+-. +.. ..+.+|
T Consensus 173 ~~~~~~~g~~VlV~GaG~vG~~~~qlak~~-Ga~Vi~~~~~~~~~~~~~~----lGa~~--v~~~~~~~~~~~~~~~~~D 245 (360)
T 1piw_A 173 VRNGCGPGKKVGIVGLGGIGSMGTLISKAM-GAETYVISRSSRKREDAMK----MGADH--YIATLEEGDWGEKYFDTFD 245 (360)
T ss_dssp HHTTCSTTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHH----HTCSE--EEEGGGTSCHHHHSCSCEE
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHH----cCCCE--EEcCcCchHHHHHhhcCCC
Confidence 34677889999999986 377778888766 7899999999987776654 45422 2221111 110 014699
Q ss_pred EEEEcccccchhhHHHHHHHHHHhcccCceEEEEe
Q 018346 199 RIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 199 ~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
+|+....-.. ...++.+.++|+|||+++..-
T Consensus 246 ~vid~~g~~~----~~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 246 LIVVCASSLT----DIDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp EEEECCSCST----TCCTTTGGGGEEEEEEEEECC
T ss_pred EEEECCCCCc----HHHHHHHHHHhcCCCEEEEec
Confidence 9987543200 122445678899999987643
No 364
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=94.37 E-value=0.19 Score=45.81 Aligned_cols=92 Identities=11% Similarity=0.147 Sum_probs=64.5
Q ss_pred cCCCCCCEEEEECC--cccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCc--------cc
Q 018346 125 SRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE--------ME 194 (357)
Q Consensus 125 ~~~~~~~~vLDiGc--G~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~--------~~ 194 (357)
.++.++.+||-.|+ |.|..+..+++.. +++|+++|.+++.++.+++ .|.+. . .|..+.. ..
T Consensus 162 ~~~~~g~~vlV~Gasg~iG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~----~ga~~--~--~d~~~~~~~~~~~~~~~ 232 (343)
T 2eih_A 162 LGVRPGDDVLVMAAGSGVSVAAIQIAKLF-GARVIATAGSEDKLRRAKA----LGADE--T--VNYTHPDWPKEVRRLTG 232 (343)
T ss_dssp SCCCTTCEEEECSTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----HTCSE--E--EETTSTTHHHHHHHHTT
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHh----cCCCE--E--EcCCcccHHHHHHHHhC
Confidence 46778999999998 5778888888776 7899999999988777653 34421 1 2332211 01
Q ss_pred -cCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEE
Q 018346 195 -ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 195 -~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 232 (357)
..+|+|+.+.. . ..++.+.+.|+++|+++..
T Consensus 233 ~~~~d~vi~~~g-~------~~~~~~~~~l~~~G~~v~~ 264 (343)
T 2eih_A 233 GKGADKVVDHTG-A------LYFEGVIKATANGGRIAIA 264 (343)
T ss_dssp TTCEEEEEESSC-S------SSHHHHHHHEEEEEEEEES
T ss_pred CCCceEEEECCC-H------HHHHHHHHhhccCCEEEEE
Confidence 36999987654 2 2466778899999998764
No 365
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=94.36 E-value=0.36 Score=43.64 Aligned_cols=94 Identities=16% Similarity=0.200 Sum_probs=64.4
Q ss_pred HcCCCCCCEEEEECC--cccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc--------
Q 018346 124 RSRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-------- 193 (357)
Q Consensus 124 ~~~~~~~~~vLDiGc--G~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-------- 193 (357)
...+.++.+||-.|+ |.|..+..+++.. +++|+++|.+++.++.+++ .|.+ . . .|..+...
T Consensus 140 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~----~g~~-~-~--~d~~~~~~~~~i~~~~ 210 (333)
T 1wly_A 140 THKVKPGDYVLIHAAAGGMGHIMVPWARHL-GATVIGTVSTEEKAETARK----LGCH-H-T--INYSTQDFAEVVREIT 210 (333)
T ss_dssp TSCCCTTCEEEETTTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----HTCS-E-E--EETTTSCHHHHHHHHH
T ss_pred hhCCCCCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----cCCC-E-E--EECCCHHHHHHHHHHh
Confidence 456778999999995 5677777777766 7899999999987776654 3432 1 1 23322110
Q ss_pred -ccCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEe
Q 018346 194 -EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 194 -~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
...+|+|+.+..- ..++.+.++|+|+|+++..-
T Consensus 211 ~~~~~d~vi~~~g~-------~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 211 GGKGVDVVYDSIGK-------DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp TTCCEEEEEECSCT-------TTHHHHHHTEEEEEEEEECC
T ss_pred CCCCCeEEEECCcH-------HHHHHHHHhhccCCEEEEEe
Confidence 1358999876542 34677888999999987643
No 366
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=94.29 E-value=0.14 Score=46.26 Aligned_cols=98 Identities=11% Similarity=0.201 Sum_probs=63.8
Q ss_pred HHcCCCCCC-EEEEECC--cccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCc--cccCc
Q 018346 123 ERSRLEDGH-TVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE--MEASY 197 (357)
Q Consensus 123 ~~~~~~~~~-~vLDiGc--G~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~--~~~~f 197 (357)
.+.++.++. +||=.|+ |.|..+..+++.. +++|++++.|++.++.+++ .|.+.+ +-..+..... ..+.+
T Consensus 139 ~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~-Ga~Vi~~~~~~~~~~~~~~----lGa~~v-i~~~~~~~~~~~~~~~~ 212 (324)
T 3nx4_A 139 EDAGIRPQDGEVVVTGASGGVGSTAVALLHKL-GYQVAAVSGRESTHGYLKS----LGANRI-LSRDEFAESRPLEKQLW 212 (324)
T ss_dssp HHTTCCGGGCCEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCGGGHHHHHH----HTCSEE-EEGGGSSCCCSSCCCCE
T ss_pred hhcccCCCCCeEEEECCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHh----cCCCEE-EecCCHHHHHhhcCCCc
Confidence 344454422 4999986 4688899999887 7899999999998777754 454321 1111211110 11468
Q ss_pred cEEEEcccccchhhHHHHHHHHHHhcccCceEEEEe
Q 018346 198 DRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 198 D~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
|+|+-... ...+..+.++|+|+|+++..-
T Consensus 213 d~v~d~~g-------~~~~~~~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 213 AGAIDTVG-------DKVLAKVLAQMNYGGCVAACG 241 (324)
T ss_dssp EEEEESSC-------HHHHHHHHHTEEEEEEEEECC
T ss_pred cEEEECCC-------cHHHHHHHHHHhcCCEEEEEe
Confidence 98775432 127888899999999988753
No 367
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=94.28 E-value=0.18 Score=46.03 Aligned_cols=93 Identities=20% Similarity=0.255 Sum_probs=63.9
Q ss_pred HHcCCCCCCEEEEECC--cccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc------c
Q 018346 123 ERSRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM------E 194 (357)
Q Consensus 123 ~~~~~~~~~~vLDiGc--G~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~------~ 194 (357)
+...+.++.+||-+|+ |.|..+..+++.. +++|+++ .+++.++.+++ .|.+ .+. +-.+... .
T Consensus 144 ~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~-Ga~Vi~~-~~~~~~~~~~~----lGa~---~i~-~~~~~~~~~~~~~~ 213 (343)
T 3gaz_A 144 DRAQVQDGQTVLIQGGGGGVGHVAIQIALAR-GARVFAT-ARGSDLEYVRD----LGAT---PID-ASREPEDYAAEHTA 213 (343)
T ss_dssp TTTCCCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEE-ECHHHHHHHHH----HTSE---EEE-TTSCHHHHHHHHHT
T ss_pred HhcCCCCCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEE-eCHHHHHHHHH----cCCC---Eec-cCCCHHHHHHHHhc
Confidence 5567788999999994 4678888888876 7899999 88887666544 4442 222 2222110 1
Q ss_pred -cCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEE
Q 018346 195 -ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 195 -~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 232 (357)
..+|+|+-+.. ...+..+.++|+|+|.+++.
T Consensus 214 ~~g~D~vid~~g-------~~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 214 GQGFDLVYDTLG-------GPVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp TSCEEEEEESSC-------THHHHHHHHHEEEEEEEEES
T ss_pred CCCceEEEECCC-------cHHHHHHHHHHhcCCeEEEE
Confidence 36999887543 13577788899999998774
No 368
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=94.25 E-value=0.7 Score=41.86 Aligned_cols=101 Identities=12% Similarity=0.038 Sum_probs=65.8
Q ss_pred HHHHcCCCCCCEEEEECCcc-cHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCc------c
Q 018346 121 YCERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE------M 193 (357)
Q Consensus 121 l~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~------~ 193 (357)
........++.+||=.|+|. |..+..+++......++++|.+++.++.+++ .|.+ ..+..+-.+.. .
T Consensus 152 ~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~----lGa~--~~i~~~~~~~~~~~~~~~ 225 (346)
T 4a2c_A 152 AFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKS----FGAM--QTFNSSEMSAPQMQSVLR 225 (346)
T ss_dssp HHHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTCS--EEEETTTSCHHHHHHHHG
T ss_pred HHHHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHH----cCCe--EEEeCCCCCHHHHHHhhc
Confidence 45566778899999999974 6677778877633467899999987666654 5543 22221111110 0
Q ss_pred c-cCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEe
Q 018346 194 E-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 194 ~-~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
. ..+|+|+.... ....++.+.++|++||.+++.-
T Consensus 226 ~~~g~d~v~d~~G------~~~~~~~~~~~l~~~G~~v~~g 260 (346)
T 4a2c_A 226 ELRFNQLILETAG------VPQTVELAVEIAGPHAQLALVG 260 (346)
T ss_dssp GGCSSEEEEECSC------SHHHHHHHHHHCCTTCEEEECC
T ss_pred ccCCccccccccc------ccchhhhhhheecCCeEEEEEe
Confidence 1 35787775432 1356778889999999988743
No 369
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=94.14 E-value=0.28 Score=44.82 Aligned_cols=97 Identities=18% Similarity=0.340 Sum_probs=65.4
Q ss_pred HHHHcCCCCC--CEEEEECC--cccHHHHHHHHHCCCc-EEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc--
Q 018346 121 YCERSRLEDG--HTVLDVGC--GWGSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-- 193 (357)
Q Consensus 121 l~~~~~~~~~--~~vLDiGc--G~G~~~~~la~~~p~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-- 193 (357)
+.+...+.++ .+||-.|+ |.|..+..+++.. ++ +|+++|.+++.++.+++. .|.+ . ..|..+...
T Consensus 150 l~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~-Ga~~Vi~~~~~~~~~~~~~~~---~g~~-~---~~d~~~~~~~~ 221 (357)
T 2zb4_A 150 IQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFL-GCSRVVGICGTHEKCILLTSE---LGFD-A---AINYKKDNVAE 221 (357)
T ss_dssp HHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHT---SCCS-E---EEETTTSCHHH
T ss_pred HHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHH---cCCc-e---EEecCchHHHH
Confidence 4456677888 99999997 4566777777765 77 999999998766655432 3432 1 123322111
Q ss_pred ------ccCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEE
Q 018346 194 ------EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 194 ------~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 232 (357)
.+.+|+|+.+.. ...++.+.++|+++|++++.
T Consensus 222 ~~~~~~~~~~d~vi~~~G-------~~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 222 QLRESCPAGVDVYFDNVG-------GNISDTVISQMNENSHIILC 259 (357)
T ss_dssp HHHHHCTTCEEEEEESCC-------HHHHHHHHHTEEEEEEEEEC
T ss_pred HHHHhcCCCCCEEEECCC-------HHHHHHHHHHhccCcEEEEE
Confidence 025899887654 15678888999999998764
No 370
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.11 E-value=0.031 Score=50.82 Aligned_cols=57 Identities=19% Similarity=0.197 Sum_probs=44.4
Q ss_pred CeEEEEeccCCC-c-c-ccCccEEEEcccccch--------------hhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 180 NVEIIVADISTF-E-M-EASYDRIYSIEMFEHM--------------KNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 180 ~v~~~~~d~~~~-~-~-~~~fD~Ii~~~~~~~~--------------~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
+..++++|..+. . . .++||+|++++++... ......++.+.++|+|||.+++.....
T Consensus 14 ~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~ 87 (323)
T 1boo_A 14 NGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGA 87 (323)
T ss_dssp SEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred CceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCE
Confidence 678899997652 2 2 3689999999998532 246788999999999999999976644
No 371
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=94.04 E-value=0.54 Score=40.78 Aligned_cols=76 Identities=14% Similarity=0.207 Sum_probs=55.8
Q ss_pred CCCEEEEECCcc--c---HHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc----------
Q 018346 129 DGHTVLDVGCGW--G---SLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM---------- 193 (357)
Q Consensus 129 ~~~~vLDiGcG~--G---~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~---------- 193 (357)
.++++|=-|+++ | .++..|++. +++|+.+|.+++.++.+.+.+...+-.++.++.+|+.+...
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~--Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQL--GAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGK 82 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 578899998643 3 245556655 89999999999888888777766654578999999987320
Q ss_pred c-cCccEEEEcccc
Q 018346 194 E-ASYDRIYSIEMF 206 (357)
Q Consensus 194 ~-~~fD~Ii~~~~~ 206 (357)
. +..|+++.|..+
T Consensus 83 ~~G~iD~lvnnAg~ 96 (256)
T 4fs3_A 83 DVGNIDGVYHSIAF 96 (256)
T ss_dssp HHCCCSEEEECCCC
T ss_pred HhCCCCEEEecccc
Confidence 1 579999987643
No 372
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=93.93 E-value=0.46 Score=43.39 Aligned_cols=95 Identities=13% Similarity=0.029 Sum_probs=63.7
Q ss_pred HHcCCCCCCEEEEECC--cccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCc--------
Q 018346 123 ERSRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE-------- 192 (357)
Q Consensus 123 ~~~~~~~~~~vLDiGc--G~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~-------- 192 (357)
+..++.++.+||-.|+ |.|..+..+++.. +++|+++|.+++.++.+++ .|.+ . . .|..+..
T Consensus 156 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----~g~~-~-~--~~~~~~~~~~~~~~~ 226 (354)
T 2j8z_A 156 LVGNVQAGDYVLIHAGLSGVGTAAIQLTRMA-GAIPLVTAGSQKKLQMAEK----LGAA-A-G--FNYKKEDFSEATLKF 226 (354)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHH----HTCS-E-E--EETTTSCHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH----cCCc-E-E--EecCChHHHHHHHHH
Confidence 4456778999999984 5677777777765 7899999999988776643 3432 1 1 2322211
Q ss_pred c-ccCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEe
Q 018346 193 M-EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 193 ~-~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
. ...+|+|+.+..-. .+..+.++|+++|++++.-
T Consensus 227 ~~~~~~d~vi~~~G~~-------~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 227 TKGAGVNLILDCIGGS-------YWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp TTTSCEEEEEESSCGG-------GHHHHHHHEEEEEEEEECC
T ss_pred hcCCCceEEEECCCch-------HHHHHHHhccCCCEEEEEe
Confidence 0 13589998765421 3566778999999987743
No 373
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.78 E-value=0.27 Score=38.32 Aligned_cols=92 Identities=14% Similarity=0.122 Sum_probs=56.8
Q ss_pred CCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc----c-cCccEEEE
Q 018346 130 GHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----E-ASYDRIYS 202 (357)
Q Consensus 130 ~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~----~-~~fD~Ii~ 202 (357)
..+|+=+|||. ++..+++.+ .+..|+++|.+++.++.+++ . .+.++.+|..+... . ..+|+|++
T Consensus 7 ~~~viIiG~G~--~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~---g~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (140)
T 3fwz_A 7 CNHALLVGYGR--VGSLLGEKLLASDIPLVVIETSRTRVDELRE----R---GVRAVLGNAANEEIMQLAHLECAKWLIL 77 (140)
T ss_dssp CSCEEEECCSH--HHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T---TCEEEESCTTSHHHHHHTTGGGCSEEEE
T ss_pred CCCEEEECcCH--HHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----c---CCCEEECCCCCHHHHHhcCcccCCEEEE
Confidence 35788888864 333333322 27899999999998766553 2 56778899876321 1 56898887
Q ss_pred cccccchhhHHHHHHHHHHhcccCceEEEEe
Q 018346 203 IEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 203 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
...-.. ....+-...+.+.|+..++...
T Consensus 78 ~~~~~~---~n~~~~~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 78 TIPNGY---EAGEIVASARAKNPDIEIIARA 105 (140)
T ss_dssp CCSCHH---HHHHHHHHHHHHCSSSEEEEEE
T ss_pred ECCChH---HHHHHHHHHHHHCCCCeEEEEE
Confidence 544321 1222333456677888766644
No 374
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=93.73 E-value=0.014 Score=53.54 Aligned_cols=92 Identities=10% Similarity=0.058 Sum_probs=62.3
Q ss_pred HcCCCCCCEEEEECCcc-cHHHHHHHHHCCCc-EEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc--------
Q 018346 124 RSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-------- 193 (357)
Q Consensus 124 ~~~~~~~~~vLDiGcG~-G~~~~~la~~~p~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-------- 193 (357)
..++ ++.+||-+|+|. |..+..+++.. ++ +|+++|.|++.++.+++. .+. + .|..+...
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~l-----a~~--v--~~~~~~~~~~~~~~~~ 228 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRAS-GAGPILVSDPNPYRLAFARPY-----ADR--L--VNPLEEDLLEVVRRVT 228 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHGGGTTT-----CSE--E--ECTTTSCHHHHHHHHH
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh-----HHh--c--cCcCccCHHHHHHHhc
Confidence 5667 899999999853 77778888876 77 899999999876655442 111 1 12221110
Q ss_pred ccCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEE
Q 018346 194 EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 194 ~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 232 (357)
...+|+|+....- ...++.+.+.|+++|+++..
T Consensus 229 ~~g~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 229 GSGVEVLLEFSGN------EAAIHQGLMALIPGGEARIL 261 (343)
T ss_dssp SSCEEEEEECSCC------HHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCCEEEECCCC------HHHHHHHHHHHhcCCEEEEE
Confidence 1368998865432 34577888999999998764
No 375
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=93.68 E-value=0.19 Score=46.21 Aligned_cols=87 Identities=17% Similarity=0.166 Sum_probs=57.3
Q ss_pred CCEEEEECCc-ccHHHHHHHHHCCCcEEEEEcCCH---HHHHHHHHHHHHcCCCCeEEEEeccCC-Ccc-----ccCccE
Q 018346 130 GHTVLDVGCG-WGSLSLYIAQKYSNCKITGICNSK---TQKEFIEEQCRVLELQNVEIIVADIST-FEM-----EASYDR 199 (357)
Q Consensus 130 ~~~vLDiGcG-~G~~~~~la~~~p~~~v~~vD~s~---~~l~~a~~~~~~~~~~~v~~~~~d~~~-~~~-----~~~fD~ 199 (357)
+.+||-+|+| .|..+..+++.. +++|+++|.++ +.++.+++ .|.+ .+ | .+ +.. ...+|+
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~~~----~ga~---~v--~-~~~~~~~~~~~~~~~d~ 249 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTY-GLEVWMANRREPTEVEQTVIEE----TKTN---YY--N-SSNGYDKLKDSVGKFDV 249 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHH-TCEEEEEESSCCCHHHHHHHHH----HTCE---EE--E-CTTCSHHHHHHHCCEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCccchHHHHHHHH----hCCc---ee--c-hHHHHHHHHHhCCCCCE
Confidence 8999999984 355666667665 77999999987 66655543 3432 22 2 22 110 135899
Q ss_pred EEEcccccchhhHHHHH-HHHHHhcccCceEEEEe
Q 018346 200 IYSIEMFEHMKNYQNLL-KKISKWMKEDTLLFVHH 233 (357)
Q Consensus 200 Ii~~~~~~~~~~~~~~l-~~~~~~LkpgG~l~~~~ 233 (357)
|+.+.... ..+ +.+.+.|+++|.+++..
T Consensus 250 vid~~g~~------~~~~~~~~~~l~~~G~iv~~g 278 (366)
T 2cdc_A 250 IIDATGAD------VNILGNVIPLLGRNGVLGLFG 278 (366)
T ss_dssp EEECCCCC------THHHHHHGGGEEEEEEEEECS
T ss_pred EEECCCCh------HHHHHHHHHHHhcCCEEEEEe
Confidence 98765431 234 77889999999987743
No 376
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=93.60 E-value=0.063 Score=51.46 Aligned_cols=76 Identities=9% Similarity=0.013 Sum_probs=55.1
Q ss_pred CCEEEEECCcccHHHHHHHHHCCCcE-EEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc---------------
Q 018346 130 GHTVLDVGCGWGSLSLYIAQKYSNCK-ITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM--------------- 193 (357)
Q Consensus 130 ~~~vLDiGcG~G~~~~~la~~~p~~~-v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~--------------- 193 (357)
..+++|+.||.|+++..+... +.+ |.++|+++.+.+.-+.|.... +...++.+|+.++..
T Consensus 88 ~~~viDLFaG~GGlslG~~~a--G~~~v~avE~d~~A~~ty~~N~~~~--p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i 163 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESI--GGQCVFTSEWNKHAVRTYKANHYCD--PATHHFNEDIRDITLSHQEGVSDEAAAEHI 163 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTT--TEEEEEEECCCHHHHHHHHHHSCCC--TTTCEEESCTHHHHCTTCTTSCHHHHHHHH
T ss_pred cceEEEecCCccHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHhcccC--CCcceeccchhhhhhccccccchhhHHhhh
Confidence 468999999999999988765 554 789999999877777665211 134566788765431
Q ss_pred --c-cCccEEEEcccccch
Q 018346 194 --E-ASYDRIYSIEMFEHM 209 (357)
Q Consensus 194 --~-~~fD~Ii~~~~~~~~ 209 (357)
. ..+|+|+..++-+.+
T Consensus 164 ~~~~~~~Dvl~gGpPCQ~F 182 (482)
T 3me5_A 164 RQHIPEHDVLLAGFPCQPF 182 (482)
T ss_dssp HHHSCCCSEEEEECCCCCC
T ss_pred hhcCCCCCEEEecCCCcch
Confidence 1 368999988876554
No 377
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=93.49 E-value=0.19 Score=44.82 Aligned_cols=89 Identities=10% Similarity=0.076 Sum_probs=61.7
Q ss_pred CCCCCEEEEECC--cccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCC-Ccc--c-cCccEE
Q 018346 127 LEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADIST-FEM--E-ASYDRI 200 (357)
Q Consensus 127 ~~~~~~vLDiGc--G~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~-~~~--~-~~fD~I 200 (357)
+.++.+||-+|+ |.|..+..+++.. +++|+++|.+++.++.+++ .|.+. .+ |..+ ... . ..+|+|
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----~ga~~--~~--~~~~~~~~~~~~~~~d~v 193 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAM-GLRVLAAASRPEKLALPLA----LGAEE--AA--TYAEVPERAKAWGGLDLV 193 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSGGGSHHHHH----TTCSE--EE--EGGGHHHHHHHTTSEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHh----cCCCE--EE--ECCcchhHHHHhcCceEE
Confidence 778999999997 4677888888876 7899999999987766643 45421 12 2221 111 0 468998
Q ss_pred EEcccccchhhHHHHHHHHHHhcccCceEEEE
Q 018346 201 YSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 201 i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 232 (357)
+. ..- ..++.+.++|+|+|+++..
T Consensus 194 id-~g~-------~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 194 LE-VRG-------KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp EE-CSC-------TTHHHHHTTEEEEEEEEEC
T ss_pred EE-CCH-------HHHHHHHHhhccCCEEEEE
Confidence 87 432 2467788899999998764
No 378
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=93.47 E-value=0.85 Score=40.26 Aligned_cols=77 Identities=12% Similarity=0.112 Sum_probs=54.5
Q ss_pred CCCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCC-cc---------c--
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF-EM---------E-- 194 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~-~~---------~-- 194 (357)
.+++||=.|++ |.++..+++.+ .+++|++++.++...+.+.+.+...+..++.++.+|+.+. .. .
T Consensus 11 ~~k~vlITGas-~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~ 89 (311)
T 3o26_A 11 KRRCAVVTGGN-KGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF 89 (311)
T ss_dssp -CCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence 46778877765 44555544432 3789999999998877777766655545899999999875 21 0
Q ss_pred cCccEEEEcccc
Q 018346 195 ASYDRIYSIEMF 206 (357)
Q Consensus 195 ~~fD~Ii~~~~~ 206 (357)
+..|++|.+...
T Consensus 90 g~iD~lv~nAg~ 101 (311)
T 3o26_A 90 GKLDILVNNAGV 101 (311)
T ss_dssp SSCCEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 479999998764
No 379
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=93.44 E-value=0.4 Score=44.35 Aligned_cols=99 Identities=16% Similarity=0.137 Sum_probs=70.2
Q ss_pred CCCEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCC--CeEEEEeccCCCccccCccEEEEcccc
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ--NVEIIVADISTFEMEASYDRIYSIEMF 206 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~--~v~~~~~d~~~~~~~~~fD~Ii~~~~~ 206 (357)
.+.+||.++.+.|.++..++.. .++.+.=|-......+.|+..++++ ++++... ..+ .+..||+|+...+
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~----~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~--~~~~~~~v~~~lp- 109 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH----KPYSIGDSYISELATRENLRLNGIDESSVKFLDS-TAD--YPQQPGVVLIKVP- 109 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG----CCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEET-TSC--CCSSCSEEEEECC-
T ss_pred CCCCEEEECCCCCHHHHhhccC----CceEEEhHHHHHHHHHHHHHHcCCCccceEeccc-ccc--cccCCCEEEEEcC-
Confidence 4568999999999999988754 2344433566666778899888885 3665432 222 2367999988665
Q ss_pred cchhhHHHHHHHHHHhcccCceEEEEecc
Q 018346 207 EHMKNYQNLLKKISKWMKEDTLLFVHHFC 235 (357)
Q Consensus 207 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 235 (357)
.........+..+...|+||+.+++....
T Consensus 110 k~~~~l~~~L~~l~~~l~~~~~i~~~g~~ 138 (375)
T 4dcm_A 110 KTLALLEQQLRALRKVVTSDTRIIAGAKA 138 (375)
T ss_dssp SCHHHHHHHHHHHHTTCCTTSEEEEEEEG
T ss_pred CCHHHHHHHHHHHHhhCCCCCEEEEEecc
Confidence 34456677888999999999998775543
No 380
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=93.27 E-value=1.2 Score=38.59 Aligned_cols=104 Identities=11% Similarity=0.174 Sum_probs=67.4
Q ss_pred CCCEEEEECCcc--cH---HHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-----c----
Q 018346 129 DGHTVLDVGCGW--GS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----E---- 194 (357)
Q Consensus 129 ~~~~vLDiGcG~--G~---~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~---- 194 (357)
.++++|=.|++. |. ++..|++. +++|+.++.++...+.+.+.....+..++.++.+|+.+... .
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEA--GARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKE 83 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHC--CCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHH
Confidence 467899998763 22 44455555 78999999887666666555554443478999999987531 0
Q ss_pred --cCccEEEEcccccc-------h-----hh-----------HHHHHHHHHHhcccCceEEEEec
Q 018346 195 --ASYDRIYSIEMFEH-------M-----KN-----------YQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 195 --~~fD~Ii~~~~~~~-------~-----~~-----------~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
+..|+++.+..+.. + ++ ...+.+.+.+.++++|.++....
T Consensus 84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 148 (266)
T 3oig_A 84 QVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTY 148 (266)
T ss_dssp HHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred HhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEec
Confidence 36899998765432 1 11 12355566677778888776544
No 381
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=93.23 E-value=0.79 Score=40.75 Aligned_cols=76 Identities=16% Similarity=0.224 Sum_probs=55.3
Q ss_pred CCCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-----c------c
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----E------A 195 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~------~ 195 (357)
.+++||=.|++.| ++..+++.+ .+++|++++.+++.++.+.+.+...+. ++.++.+|+.+... . +
T Consensus 30 ~gk~vlVTGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (301)
T 3tjr_A 30 DGRAAVVTGGASG-IGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGF-DAHGVVCDVRHLDEMVRLADEAFRLLG 107 (301)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 5678998887654 444444332 278999999999988888777766655 79999999987421 0 3
Q ss_pred CccEEEEcccc
Q 018346 196 SYDRIYSIEMF 206 (357)
Q Consensus 196 ~fD~Ii~~~~~ 206 (357)
..|++|.+...
T Consensus 108 ~id~lvnnAg~ 118 (301)
T 3tjr_A 108 GVDVVFSNAGI 118 (301)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 78999988754
No 382
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=93.21 E-value=0.54 Score=42.24 Aligned_cols=93 Identities=16% Similarity=0.243 Sum_probs=61.9
Q ss_pred HHcCCCCCCEEEEEC-Cc-ccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCc-cc---cC
Q 018346 123 ERSRLEDGHTVLDVG-CG-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE-ME---AS 196 (357)
Q Consensus 123 ~~~~~~~~~~vLDiG-cG-~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~-~~---~~ 196 (357)
+...+.++.+||=+| +| .|..+..+++.. +++|++++ +++.++.+ +..|.+. .+ |..+.. .. ..
T Consensus 146 ~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~-Ga~vi~~~-~~~~~~~~----~~lGa~~--~i--~~~~~~~~~~~~~g 215 (321)
T 3tqh_A 146 NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQK-GTTVITTA-SKRNHAFL----KALGAEQ--CI--NYHEEDFLLAISTP 215 (321)
T ss_dssp HHTTCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEE-CHHHHHHH----HHHTCSE--EE--ETTTSCHHHHCCSC
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHc-CCEEEEEe-ccchHHHH----HHcCCCE--EE--eCCCcchhhhhccC
Confidence 667788999999996 44 688888899887 78999987 45544444 3456532 22 222211 11 46
Q ss_pred ccEEEEcccccchhhHHHHHHHHHHhcccCceEEEE
Q 018346 197 YDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 197 fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 232 (357)
+|+|+-...- . .+..+.++|+|+|+++..
T Consensus 216 ~D~v~d~~g~------~-~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 216 VDAVIDLVGG------D-VGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp EEEEEESSCH------H-HHHHHGGGEEEEEEEEEC
T ss_pred CCEEEECCCc------H-HHHHHHHhccCCCEEEEe
Confidence 8988864331 2 237788999999998763
No 383
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=93.20 E-value=0.48 Score=45.00 Aligned_cols=94 Identities=14% Similarity=0.168 Sum_probs=64.0
Q ss_pred cCCCCCCEEEEECC--cccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCC-----------
Q 018346 125 SRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF----------- 191 (357)
Q Consensus 125 ~~~~~~~~vLDiGc--G~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~----------- 191 (357)
..+.++.+||=+|+ |.|..+..+++.. +++|++++.+++.++.+++ .|.+. ++...-.+.
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~-Ga~vi~~~~~~~~~~~~~~----lGa~~--vi~~~~~d~~~~~~~~~~~~ 296 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAG-GANPICVVSSPQKAEICRA----MGAEA--IIDRNAEGYRFWKDENTQDP 296 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----HTCCE--EEETTTTTCCSEEETTEECH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCeEEEEECCHHHHHHHHh----hCCcE--EEecCcCcccccccccccch
Confidence 46778999999997 4688888888876 8899999999987776654 45421 121111000
Q ss_pred ----------c--cc-cCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEE
Q 018346 192 ----------E--ME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 192 ----------~--~~-~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 232 (357)
. .. ..+|+|+-... ...+..+.++|+|||.+++.
T Consensus 297 ~~~~~~~~~i~~~t~g~g~Dvvid~~G-------~~~~~~~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 297 KEWKRFGKRIRELTGGEDIDIVFEHPG-------RETFGASVFVTRKGGTITTC 343 (456)
T ss_dssp HHHHHHHHHHHHHHTSCCEEEEEECSC-------HHHHHHHHHHEEEEEEEEES
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEcCC-------chhHHHHHHHhhCCcEEEEE
Confidence 0 01 36898886433 14677788899999998874
No 384
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=93.12 E-value=0.19 Score=46.30 Aligned_cols=98 Identities=20% Similarity=0.206 Sum_probs=62.8
Q ss_pred HHHcCCC-CCCEEEEECCc-ccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCc----ccc
Q 018346 122 CERSRLE-DGHTVLDVGCG-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE----MEA 195 (357)
Q Consensus 122 ~~~~~~~-~~~~vLDiGcG-~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~----~~~ 195 (357)
+....+. ++.+||-+|+| .|..+..+++.. +++|+++|.+++.++.+++ ..|.+ .++ |..+.. ..+
T Consensus 179 l~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~---~lGa~--~v~--~~~~~~~~~~~~~ 250 (366)
T 1yqd_A 179 LKYFGLDEPGKHIGIVGLGGLGHVAVKFAKAF-GSKVTVISTSPSKKEEALK---NFGAD--SFL--VSRDQEQMQAAAG 250 (366)
T ss_dssp HHHTTCCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGHHHHHH---TSCCS--EEE--ETTCHHHHHHTTT
T ss_pred HHhcCcCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH---hcCCc--eEE--eccCHHHHHHhhC
Confidence 3445666 88999999986 366777777776 7899999999987665542 33442 112 222110 014
Q ss_pred CccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEe
Q 018346 196 SYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 196 ~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
.+|+|+....... .++.+.+.|+++|+++...
T Consensus 251 ~~D~vid~~g~~~------~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 251 TLDGIIDTVSAVH------PLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp CEEEEEECCSSCC------CSHHHHHHEEEEEEEEECC
T ss_pred CCCEEEECCCcHH------HHHHHHHHHhcCCEEEEEc
Confidence 6899987644321 2345678899999987643
No 385
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=93.12 E-value=0.51 Score=40.84 Aligned_cols=103 Identities=13% Similarity=0.107 Sum_probs=65.5
Q ss_pred CCCEEEEECCcccHHHHHHHHHC---CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-----c------
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY---SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----E------ 194 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~---p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~------ 194 (357)
++++||=.| |+|.++..+++.+ .+.+|++++.++...+...+.+...+. ++.++.+|+.+... .
T Consensus 3 ~~k~vlITG-asggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~ 80 (276)
T 1wma_A 3 GIHVALVTG-GNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGL-SPRFHQLDIDDLQSIRALRDFLRKEY 80 (276)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTC-CCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCC-eeEEEECCCCCHHHHHHHHHHHHHhc
Confidence 456777666 5566666665432 278999999998877766666655543 78999999987421 0
Q ss_pred cCccEEEEcccccch--------hh-----------HHHHHHHHHHhcccCceEEEEe
Q 018346 195 ASYDRIYSIEMFEHM--------KN-----------YQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 195 ~~fD~Ii~~~~~~~~--------~~-----------~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
+.+|+||.+...... .+ ...+++.+.+.++++|.++...
T Consensus 81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~s 138 (276)
T 1wma_A 81 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVS 138 (276)
T ss_dssp SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEEC
Confidence 278999987643210 11 1234555666666677766643
No 386
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=93.10 E-value=1 Score=39.36 Aligned_cols=102 Identities=10% Similarity=0.050 Sum_probs=66.3
Q ss_pred CCCEEEEECCcccH---HHHHHHHHCCCcEEEEEcCC------------HHHHHHHHHHHHHcCCCCeEEEEeccCCCcc
Q 018346 129 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNS------------KTQKEFIEEQCRVLELQNVEIIVADISTFEM 193 (357)
Q Consensus 129 ~~~~vLDiGcG~G~---~~~~la~~~p~~~v~~vD~s------------~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~ 193 (357)
.+++||=.|++.|. ++..|++. +++|+.+|.+ ...++.+.......+. ++.++.+|+.+...
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~ 85 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEE--GADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGR-KAYTAEVDVRDRAA 85 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTS-CEEEEECCTTCHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC--CCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCC-ceEEEEccCCCHHH
Confidence 46788888876542 34444444 7899999987 6666666666655554 89999999987421
Q ss_pred -----c------cCccEEEEcccccch------hh-----------HHHHHHHHHHhcccCceEEEEe
Q 018346 194 -----E------ASYDRIYSIEMFEHM------KN-----------YQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 194 -----~------~~fD~Ii~~~~~~~~------~~-----------~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
. +..|++|.+...... ++ .-.+.+.+.+.++++|.++...
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 153 (287)
T 3pxx_A 86 VSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTG 153 (287)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEec
Confidence 0 378999988754221 11 2234556666777788876643
No 387
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=92.97 E-value=1 Score=39.12 Aligned_cols=74 Identities=14% Similarity=0.086 Sum_probs=54.9
Q ss_pred CCCEEEEECCcccH---HHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-----c------
Q 018346 129 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----E------ 194 (357)
Q Consensus 129 ~~~~vLDiGcG~G~---~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~------ 194 (357)
.++++|=.|++.|. ++..|++. +++|+.+|.+++.++.+.+.....+. ++.++.+|+.+... .
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQ--GADLVLAARTVERLEDVAKQVTDTGR-RALSVGTDITDDAQVAHLVDETMKAY 86 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHC--cCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 56789988876652 44445554 78999999999988887777766654 89999999987421 0
Q ss_pred cCccEEEEccc
Q 018346 195 ASYDRIYSIEM 205 (357)
Q Consensus 195 ~~fD~Ii~~~~ 205 (357)
+..|++|.+..
T Consensus 87 g~id~lv~nAg 97 (264)
T 3ucx_A 87 GRVDVVINNAF 97 (264)
T ss_dssp SCCSEEEECCC
T ss_pred CCCcEEEECCC
Confidence 37899998873
No 388
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=92.94 E-value=0.28 Score=46.04 Aligned_cols=46 Identities=15% Similarity=0.083 Sum_probs=36.0
Q ss_pred CCEEEEECCcccHHHHHHHHHC----C-CcEEEEEcCCHHHHHHHHHHHHH
Q 018346 130 GHTVLDVGCGWGSLSLYIAQKY----S-NCKITGICNSKTQKEFIEEQCRV 175 (357)
Q Consensus 130 ~~~vLDiGcG~G~~~~~la~~~----p-~~~v~~vD~s~~~l~~a~~~~~~ 175 (357)
..+|+|+|.|.|.++..+.+.. + ..+++.||+|+...+.-++++..
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 4799999999999888776432 1 24899999999987777776654
No 389
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=92.86 E-value=1.9 Score=38.12 Aligned_cols=102 Identities=14% Similarity=0.148 Sum_probs=66.8
Q ss_pred CCCEEEEECCccc-H----HHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-----c----
Q 018346 129 DGHTVLDVGCGWG-S----LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----E---- 194 (357)
Q Consensus 129 ~~~~vLDiGcG~G-~----~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~---- 194 (357)
.++++|=.|+++| . ++..|++. +++|+.++.++...+.+.+.....+ ++.++.+|+.+... .
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~ 105 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREA--GAELAFTYQGDALKKRVEPLAEELG--AFVAGHCDVADAASIDAVFETLEK 105 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHT--TCEEEEEECSHHHHHHHHHHHHHHT--CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcC--CceEEECCCCCHHHHHHHHHHHHH
Confidence 5788999997643 2 44455555 7899999998765555555444443 68899999987421 0
Q ss_pred --cCccEEEEcccccc----------h--hh-----------HHHHHHHHHHhcccCceEEEEec
Q 018346 195 --ASYDRIYSIEMFEH----------M--KN-----------YQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 195 --~~fD~Ii~~~~~~~----------~--~~-----------~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
+..|++|.+..+.. . ++ ...+.+.+.+.++++|.++....
T Consensus 106 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS 170 (293)
T 3grk_A 106 KWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTY 170 (293)
T ss_dssp HTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred hcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEee
Confidence 47899998875432 0 11 23355666777778888776543
No 390
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=92.72 E-value=0.74 Score=35.60 Aligned_cols=91 Identities=12% Similarity=0.151 Sum_probs=54.2
Q ss_pred CCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc----c-cCccEEEE
Q 018346 130 GHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----E-ASYDRIYS 202 (357)
Q Consensus 130 ~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~----~-~~fD~Ii~ 202 (357)
..+|+=+|||. ++..+++.+ .+.+|+++|.+++.++.+++ . .+.++.+|..+... . ..+|+|+.
T Consensus 6 ~~~v~I~G~G~--iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~---~~~~~~gd~~~~~~l~~~~~~~~d~vi~ 76 (141)
T 3llv_A 6 RYEYIVIGSEA--AGVGLVRELTAAGKKVLAVDKSKEKIELLED----E---GFDAVIADPTDESFYRSLDLEGVSAVLI 76 (141)
T ss_dssp CCSEEEECCSH--HHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T---TCEEEECCTTCHHHHHHSCCTTCSEEEE
T ss_pred CCEEEEECCCH--HHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----C---CCcEEECCCCCHHHHHhCCcccCCEEEE
Confidence 45799999854 555444432 27799999999987665543 2 46778888876321 1 46898887
Q ss_pred cccccchhhHHHHHHHHHHhcccCceEEEEe
Q 018346 203 IEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 203 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
...- . .....+....+.+. ...++...
T Consensus 77 ~~~~--~-~~n~~~~~~a~~~~-~~~iia~~ 103 (141)
T 3llv_A 77 TGSD--D-EFNLKILKALRSVS-DVYAIVRV 103 (141)
T ss_dssp CCSC--H-HHHHHHHHHHHHHC-CCCEEEEE
T ss_pred ecCC--H-HHHHHHHHHHHHhC-CceEEEEE
Confidence 6551 1 12223333344445 55555533
No 391
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=92.71 E-value=0.76 Score=40.00 Aligned_cols=75 Identities=13% Similarity=0.011 Sum_probs=56.0
Q ss_pred CCCEEEEECCcccH---HHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc----------c-
Q 018346 129 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----------E- 194 (357)
Q Consensus 129 ~~~~vLDiGcG~G~---~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~----------~- 194 (357)
.++++|=-|++.|. ++..|++. +++|+.+|.+++.++.+.+.+...+. ++.++.+|+.+... .
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~--Ga~Vvi~~~~~~~~~~~~~~l~~~g~-~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAA--GARVILNDIRATLLAESVDTLTRKGY-DAHGVAFDVTDELAIEAAFSKLDAEG 84 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEECCSCHHHHHHHHHHHHHTTC-CEEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 46778877766653 44445555 89999999999998888887777765 78899999987320 1
Q ss_pred cCccEEEEcccc
Q 018346 195 ASYDRIYSIEMF 206 (357)
Q Consensus 195 ~~fD~Ii~~~~~ 206 (357)
++.|+++.|...
T Consensus 85 G~iDiLVNNAG~ 96 (255)
T 4g81_D 85 IHVDILINNAGI 96 (255)
T ss_dssp CCCCEEEECCCC
T ss_pred CCCcEEEECCCC
Confidence 578999988744
No 392
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=92.69 E-value=0.11 Score=47.82 Aligned_cols=99 Identities=12% Similarity=0.129 Sum_probs=57.0
Q ss_pred CCEEEEECCc-ccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc-cCccEEEEccccc
Q 018346 130 GHTVLDVGCG-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEMFE 207 (357)
Q Consensus 130 ~~~vLDiGcG-~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~Ii~~~~~~ 207 (357)
+.+|+=+|+| .|..+..++... +++|+++|.+++.++.+++.... .+.....+..++... ..+|+|+......
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~-Ga~V~v~dr~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~DvVI~~~~~~ 241 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGL-GAQVQIFDINVERLSYLETLFGS----RVELLYSNSAEIETAVAEADLLIGAVLVP 241 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHGG----GSEEEECCHHHHHHHHHTCSEEEECCCCT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHhhCc----eeEeeeCCHHHHHHHHcCCCEEEECCCcC
Confidence 4899999986 344444555555 67999999999877766554321 222222221111111 4689998765443
Q ss_pred chhhHHHHHHHHHHhcccCceEEEEe
Q 018346 208 HMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 208 ~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
....+.-+.+...+.++|||+++...
T Consensus 242 ~~~~~~li~~~~~~~~~~g~~ivdv~ 267 (361)
T 1pjc_A 242 GRRAPILVPASLVEQMRTGSVIVDVA 267 (361)
T ss_dssp TSSCCCCBCHHHHTTSCTTCEEEETT
T ss_pred CCCCCeecCHHHHhhCCCCCEEEEEe
Confidence 21111111344567899999876543
No 393
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=92.69 E-value=1.1 Score=38.80 Aligned_cols=76 Identities=18% Similarity=0.161 Sum_probs=55.0
Q ss_pred CCCEEEEECC-cccH---HHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-----c-----
Q 018346 129 DGHTVLDVGC-GWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----E----- 194 (357)
Q Consensus 129 ~~~~vLDiGc-G~G~---~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~----- 194 (357)
.+++||=.|+ |+|. ++..|+++ +++|+.+|.++..++.+.+.+...+..++.++.+|+.+... .
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 98 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLE--GADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEK 98 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 4678888887 4442 44555555 78999999999888777776655544489999999987421 0
Q ss_pred -cCccEEEEcccc
Q 018346 195 -ASYDRIYSIEMF 206 (357)
Q Consensus 195 -~~fD~Ii~~~~~ 206 (357)
++.|++|.+...
T Consensus 99 ~g~id~li~~Ag~ 111 (266)
T 3o38_A 99 AGRLDVLVNNAGL 111 (266)
T ss_dssp HSCCCEEEECCCC
T ss_pred hCCCcEEEECCCc
Confidence 368999988754
No 394
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=92.55 E-value=0.078 Score=47.98 Aligned_cols=97 Identities=16% Similarity=0.214 Sum_probs=62.3
Q ss_pred HHcCCCCCC-EEEEECC--cccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEecc-CC-C-c-ccc
Q 018346 123 ERSRLEDGH-TVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADI-ST-F-E-MEA 195 (357)
Q Consensus 123 ~~~~~~~~~-~vLDiGc--G~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~-~~-~-~-~~~ 195 (357)
...++.++. +||-+|+ |.|..+..+++.. +++|++++.+++.++.+++ .|.+.+ +-..+. .+ . . ...
T Consensus 142 ~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~----lGa~~~-i~~~~~~~~~~~~~~~~ 215 (328)
T 1xa0_A 142 EEHGLTPERGPVLVTGATGGVGSLAVSMLAKR-GYTVEASTGKAAEHDYLRV----LGAKEV-LAREDVMAERIRPLDKQ 215 (328)
T ss_dssp HHTTCCGGGCCEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCTTCHHHHHH----TTCSEE-EECC---------CCSC
T ss_pred hhcCCCCCCceEEEecCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHH----cCCcEE-EecCCcHHHHHHHhcCC
Confidence 345666775 8999997 5678888888876 7899999999887766643 454321 111111 01 0 0 114
Q ss_pred CccEEEEcccccchhhHHHHHHHHHHhcccCceEEEE
Q 018346 196 SYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 196 ~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 232 (357)
.+|+|+-...- ..+..+.++|+++|++++.
T Consensus 216 ~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 216 RWAAAVDPVGG-------RTLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp CEEEEEECSTT-------TTHHHHHHTEEEEEEEEEC
T ss_pred cccEEEECCcH-------HHHHHHHHhhccCCEEEEE
Confidence 68988865431 2466778899999998764
No 395
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=92.33 E-value=0.17 Score=46.40 Aligned_cols=99 Identities=19% Similarity=0.216 Sum_probs=62.3
Q ss_pred HHHcCCC-CCCEEEEECCc-ccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEe-ccCCCc-cccCc
Q 018346 122 CERSRLE-DGHTVLDVGCG-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVA-DISTFE-MEASY 197 (357)
Q Consensus 122 ~~~~~~~-~~~~vLDiGcG-~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~-d~~~~~-~~~~f 197 (357)
+....+. ++.+||-+|+| .|..+..+++.. +++|+++|.+++.++.+++ ..|.+.+ +.. +..... ..+.+
T Consensus 172 l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~~~~~~~~~~~~---~lGa~~v--i~~~~~~~~~~~~~g~ 245 (357)
T 2cf5_A 172 LSHFGLKQPGLRGGILGLGGVGHMGVKIAKAM-GHHVTVISSSNKKREEALQ---DLGADDY--VIGSDQAKMSELADSL 245 (357)
T ss_dssp HHHTSTTSTTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSTTHHHHHHT---TSCCSCE--EETTCHHHHHHSTTTE
T ss_pred HHhcCCCCCCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHH---HcCCcee--eccccHHHHHHhcCCC
Confidence 3445677 89999999986 466777778776 7899999999876655542 3454322 111 100000 01468
Q ss_pred cEEEEcccccchhhHHHHHHHHHHhcccCceEEEE
Q 018346 198 DRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 198 D~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 232 (357)
|+|+-...-. ..++...++|+|+|+++..
T Consensus 246 D~vid~~g~~------~~~~~~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 246 DYVIDTVPVH------HALEPYLSLLKLDGKLILM 274 (357)
T ss_dssp EEEEECCCSC------CCSHHHHTTEEEEEEEEEC
T ss_pred CEEEECCCCh------HHHHHHHHHhccCCEEEEe
Confidence 9988654321 1245567899999998774
No 396
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=92.31 E-value=0.73 Score=39.86 Aligned_cols=101 Identities=11% Similarity=0.182 Sum_probs=64.3
Q ss_pred CCCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc---------c--c
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM---------E--A 195 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~---------~--~ 195 (357)
.++++|=.|++.| ++..+++.+ .+++|+.+|.+++.++...+.. +. ++.++.+|+.+... . +
T Consensus 7 ~gk~~lVTGas~g-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (255)
T 4eso_A 7 QGKKAIVIGGTHG-MGLATVRRLVEGGAEVLLTGRNESNIARIREEF---GP-RVHALRSDIADLNEIAVLGAAAGQTLG 81 (255)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GG-GEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CC-cceEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4678888886654 444444332 2789999999988776655443 22 78999999987421 0 4
Q ss_pred CccEEEEcccccch--------hh-----------HHHHHHHHHHhcccCceEEEEec
Q 018346 196 SYDRIYSIEMFEHM--------KN-----------YQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 196 ~fD~Ii~~~~~~~~--------~~-----------~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
..|+++.+...... ++ .-.+.+.+.+.++++|.++....
T Consensus 82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 139 (255)
T 4eso_A 82 AIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSS 139 (255)
T ss_dssp SEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECC
Confidence 78999987644211 11 22345556666777887766443
No 397
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=92.24 E-value=1.1 Score=39.61 Aligned_cols=102 Identities=17% Similarity=0.202 Sum_probs=65.9
Q ss_pred CCCEEEEECCcc-cHH----HHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-----c----
Q 018346 129 DGHTVLDVGCGW-GSL----SLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----E---- 194 (357)
Q Consensus 129 ~~~~vLDiGcG~-G~~----~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~---- 194 (357)
.++++|=.|+++ ..+ +..|++. +++|+.+|.++...+.+.+.....+ ++.++.+|+.+... .
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~ 104 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQ--GAEVALTYLSETFKKRVDPLAESLG--VKLTVPCDVSDAESVDNMFKVLAE 104 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHHHT--CCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHhcC--CeEEEEcCCCCHHHHHHHHHHHHH
Confidence 467899999754 234 4444544 7899999999876665555555444 56889999987421 0
Q ss_pred --cCccEEEEcccccc----------h--hh-----------HHHHHHHHHHhcccCceEEEEec
Q 018346 195 --ASYDRIYSIEMFEH----------M--KN-----------YQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 195 --~~fD~Ii~~~~~~~----------~--~~-----------~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
+..|++|.+..+.. . ++ ...+.+.+.+.++.+|.++....
T Consensus 105 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS 169 (296)
T 3k31_A 105 EWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSY 169 (296)
T ss_dssp HHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred HcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEe
Confidence 47899998875432 1 11 22345556667777888776543
No 398
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=92.21 E-value=0.38 Score=38.19 Aligned_cols=48 Identities=19% Similarity=0.141 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHHCCCcEEEEEcC
Q 018346 113 AEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICN 161 (357)
Q Consensus 113 ~~~~~l~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~ 161 (357)
+|+..+++.+.....-+ .-|||+|-|+|..=..|.+.+|+..++++|-
T Consensus 25 aQR~~L~~a~~~v~~~~-GpVlElGLGNGRTydHLRe~~P~R~I~vfDR 72 (174)
T 3iht_A 25 SQRACLEHAIAQTAGLS-GPVYELGLGNGRTYHHLRQHVQGREIYVFER 72 (174)
T ss_dssp HHHHHHHHHHHHTTTCC-SCEEEECCTTCHHHHHHHHHCCSSCEEEEES
T ss_pred HHHHHHHHHHHHhcCCC-CceEEecCCCChhHHHHHHhCCCCcEEEEEe
Confidence 55667777777765444 4699999999999999999999999999984
No 399
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=92.15 E-value=1.6 Score=37.97 Aligned_cols=104 Identities=16% Similarity=0.158 Sum_probs=65.8
Q ss_pred CCCEEEEECCcccHHHHHHHHHC--CCcEEEEEcC-CHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-----c------
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICN-SKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----E------ 194 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~-s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~------ 194 (357)
.++++|=.|++. .++..+++.+ .+++|+.++. +....+...+.....+. ++.++.+|+.+... .
T Consensus 17 ~~k~~lVTGas~-gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~ 94 (270)
T 3is3_A 17 DGKVALVTGSGR-GIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGS-DAIAIKADIRQVPEIVKLFDQAVAHF 94 (270)
T ss_dssp TTCEEEESCTTS-HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCc-hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 467888887654 4444444332 2789988765 45556655565655554 79999999987421 0
Q ss_pred cCccEEEEcccccch--------hh-----------HHHHHHHHHHhcccCceEEEEec
Q 018346 195 ASYDRIYSIEMFEHM--------KN-----------YQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 195 ~~fD~Ii~~~~~~~~--------~~-----------~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
+..|++|.+...... ++ .-.+.+.+.+.++++|.++....
T Consensus 95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 378999987654221 11 23355667778888888776544
No 400
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=92.13 E-value=0.15 Score=47.08 Aligned_cols=100 Identities=14% Similarity=0.157 Sum_probs=54.7
Q ss_pred CCCEEEEECCcc-cHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc-cCccEEEEcccc
Q 018346 129 DGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEMF 206 (357)
Q Consensus 129 ~~~~vLDiGcG~-G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~Ii~~~~~ 206 (357)
++.+|+=+|+|. |..+...+... +++|+++|.+++.++.+.+. .+. .+.....+..++... ..+|+|+.....
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~-Ga~V~~~d~~~~~~~~~~~~---~g~-~~~~~~~~~~~l~~~~~~~DvVi~~~g~ 239 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGM-GAQVTILDVNHKRLQYLDDV---FGG-RVITLTATEANIKKSVQHADLLIGAVLV 239 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHH---TTT-SEEEEECCHHHHHHHHHHCSEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHh---cCc-eEEEecCCHHHHHHHHhCCCEEEECCCC
Confidence 468999999852 33333344444 78999999999876655432 233 322222121111111 468999887654
Q ss_pred cchhhHHHHHHHHHHhcccCceEEEEe
Q 018346 207 EHMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 207 ~~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
.......-+.+.+.+.++|||.++...
T Consensus 240 ~~~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 240 PGAKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp ------CCSCHHHHTTSCTTCEEEECC
T ss_pred CccccchhHHHHHHHhhcCCCEEEEEe
Confidence 321111112456778899999876543
No 401
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=92.06 E-value=2 Score=37.60 Aligned_cols=75 Identities=12% Similarity=0.061 Sum_probs=51.5
Q ss_pred CCCEEEEECCcccH---HHHHHHHHCCCcEEEEEcC-CHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-----c-----
Q 018346 129 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICN-SKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----E----- 194 (357)
Q Consensus 129 ~~~~vLDiGcG~G~---~~~~la~~~p~~~v~~vD~-s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~----- 194 (357)
.++++|=.|++.|. ++..|++. +++|+.+|. +++.++...+.....+. ++.++.+|+.+... .
T Consensus 28 ~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~ 104 (280)
T 4da9_A 28 ARPVAIVTGGRRGIGLGIARALAAS--GFDIAITGIGDAEGVAPVIAELSGLGA-RVIFLRADLADLSSHQATVDAVVAE 104 (280)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCCHHHHHHHHHHHHHTTC-CEEEEECCTTSGGGHHHHHHHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC--CCeEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHH
Confidence 46788888866542 34444444 789999985 77777666666665554 89999999987431 0
Q ss_pred -cCccEEEEcccc
Q 018346 195 -ASYDRIYSIEMF 206 (357)
Q Consensus 195 -~~fD~Ii~~~~~ 206 (357)
+..|++|.+...
T Consensus 105 ~g~iD~lvnnAg~ 117 (280)
T 4da9_A 105 FGRIDCLVNNAGI 117 (280)
T ss_dssp HSCCCEEEEECC-
T ss_pred cCCCCEEEECCCc
Confidence 378999988754
No 402
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=92.05 E-value=0.11 Score=48.13 Aligned_cols=100 Identities=13% Similarity=0.087 Sum_probs=56.0
Q ss_pred CCCEEEEECCcc-cHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-ccCccEEEEcccc
Q 018346 129 DGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-EASYDRIYSIEMF 206 (357)
Q Consensus 129 ~~~~vLDiGcG~-G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~Ii~~~~~ 206 (357)
++.+|+=+|+|. |..+...++.+ +++|+++|.+++.++.+++. .+. .+.....+..++.. -...|+|+.....
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~-Ga~V~~~d~~~~~l~~~~~~---~g~-~~~~~~~~~~~l~~~l~~aDvVi~~~~~ 241 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGM-GATVTVLDINIDKLRQLDAE---FCG-RIHTRYSSAYELEGAVKRADLVIGAVLV 241 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHH---TTT-SSEEEECCHHHHHHHHHHCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHh---cCC-eeEeccCCHHHHHHHHcCCCEEEECCCc
Confidence 578999999863 44444444455 67999999999876665442 232 22222111111110 1458999875422
Q ss_pred cchhhHHHHHHHHHHhcccCceEEEEe
Q 018346 207 EHMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 207 ~~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
.......-+.+...+.+||||+++...
T Consensus 242 p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 242 PGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp TTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred CCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 211111112355667899999876543
No 403
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=91.90 E-value=0.21 Score=45.07 Aligned_cols=96 Identities=14% Similarity=0.236 Sum_probs=62.6
Q ss_pred HcCCCCCC-EEEEECC--cccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEecc-CC-Cc--cccC
Q 018346 124 RSRLEDGH-TVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADI-ST-FE--MEAS 196 (357)
Q Consensus 124 ~~~~~~~~-~vLDiGc--G~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~-~~-~~--~~~~ 196 (357)
..++.++. +||-.|+ |.|..+..+++.. +++|++++.+++.++.+++ .|.+.+ +-..+. .+ .. ....
T Consensus 144 ~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~----lGa~~v-~~~~~~~~~~~~~~~~~~ 217 (330)
T 1tt7_A 144 QNGLSPEKGSVLVTGATGGVGGIAVSMLNKR-GYDVVASTGNREAADYLKQ----LGASEV-ISREDVYDGTLKALSKQQ 217 (330)
T ss_dssp HTTCCGGGCCEEEESTTSHHHHHHHHHHHHH-TCCEEEEESSSSTHHHHHH----HTCSEE-EEHHHHCSSCCCSSCCCC
T ss_pred hcCcCCCCceEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----cCCcEE-EECCCchHHHHHHhhcCC
Confidence 45566775 8999997 4677888888776 7899999999887766654 354321 111111 11 10 1146
Q ss_pred ccEEEEcccccchhhHHHHHHHHHHhcccCceEEEE
Q 018346 197 YDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 197 fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 232 (357)
+|+|+.... . ..+..+.++|+|||++++.
T Consensus 218 ~d~vid~~g-----~--~~~~~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 218 WQGAVDPVG-----G--KQLASLLSKIQYGGSVAVS 246 (330)
T ss_dssp EEEEEESCC-----T--HHHHHHHTTEEEEEEEEEC
T ss_pred ccEEEECCc-----H--HHHHHHHHhhcCCCEEEEE
Confidence 898886543 1 2577888999999998774
No 404
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=91.79 E-value=2.4 Score=36.90 Aligned_cols=103 Identities=12% Similarity=0.068 Sum_probs=65.4
Q ss_pred CCCEEEEECCcccH---HHHHHHHHCCCcEEEEEcCC-HHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-----c-----
Q 018346 129 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNS-KTQKEFIEEQCRVLELQNVEIIVADISTFEM-----E----- 194 (357)
Q Consensus 129 ~~~~vLDiGcG~G~---~~~~la~~~p~~~v~~vD~s-~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~----- 194 (357)
.++++|=.|++.|. ++..|++. +++|+.++.+ ....+...+.....+. ++.++.+|+.+... .
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALE--GAAVALTYVNAAERAQAVVSEIEQAGG-RAVAIRADNRDAEAIEQAIRETVEA 106 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHH
Confidence 46789988876542 34444444 7899888544 4555555555555554 78999999987421 0
Q ss_pred -cCccEEEEcccccch--------hh-----------HHHHHHHHHHhcccCceEEEEec
Q 018346 195 -ASYDRIYSIEMFEHM--------KN-----------YQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 195 -~~fD~Ii~~~~~~~~--------~~-----------~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
+..|++|.+...... ++ .-.+++.+.+.|+++|.++....
T Consensus 107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS 166 (271)
T 3v2g_A 107 LGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS 166 (271)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence 378999988644211 11 23456667778888888776543
No 405
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=91.52 E-value=0.63 Score=43.95 Aligned_cols=96 Identities=15% Similarity=0.112 Sum_probs=64.2
Q ss_pred cCCCCCCEEEEECC--cccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEe--ccCCC---------
Q 018346 125 SRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVA--DISTF--------- 191 (357)
Q Consensus 125 ~~~~~~~~vLDiGc--G~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~--d~~~~--------- 191 (357)
..+.++.+||=.|+ |.|..+..+++.. +++|++++.+++.++.+++ .|.+.+ +... |..+.
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~-Ga~vi~~~~~~~~~~~~~~----lGa~~~-i~~~~~~~~~~~~~~~~~~~ 289 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNG-GGIPVAVVSSAQKEAAVRA----LGCDLV-INRAELGITDDIADDPRRVV 289 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----TTCCCE-EEHHHHTCCTTGGGCHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHh----cCCCEE-Eecccccccccccccccccc
Confidence 56778999999997 4577888888876 7899999999987776643 454321 1111 11000
Q ss_pred ------c------cccCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEe
Q 018346 192 ------E------MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 192 ------~------~~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
. ....+|+|+.+..- ..++...++|++||.+++.-
T Consensus 290 ~~~~~~~~~v~~~~g~g~Dvvid~~G~-------~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 290 ETGRKLAKLVVEKAGREPDIVFEHTGR-------VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHHHHSSCCSEEEECSCH-------HHHHHHHHHSCTTCEEEESC
T ss_pred hhhhHHHHHHHHHhCCCceEEEECCCc-------hHHHHHHHHHhcCCEEEEEe
Confidence 0 01369999875442 35677888999999988743
No 406
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=91.42 E-value=0.16 Score=51.01 Aligned_cols=103 Identities=10% Similarity=0.095 Sum_probs=64.9
Q ss_pred CCCEEEEECCcccHHHHHHHHHC-------CC-----cEEEEEcC---CHHHHHHHHH-----------HHHHc-----C
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY-------SN-----CKITGICN---SKTQKEFIEE-----------QCRVL-----E 177 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~-------p~-----~~v~~vD~---s~~~l~~a~~-----------~~~~~-----~ 177 (357)
+..+|+|+|.|+|...+.+.+.+ |. .+++.+|. +.+.+..+-. ..... |
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 45799999999999887765532 22 57999998 5554443221 11111 1
Q ss_pred -----C-C---CeEEEEeccCCCcc------ccCccEEEEcccccch-h--hHHHHHHHHHHhcccCceEEE
Q 018346 178 -----L-Q---NVEIIVADISTFEM------EASYDRIYSIEMFEHM-K--NYQNLLKKISKWMKEDTLLFV 231 (357)
Q Consensus 178 -----~-~---~v~~~~~d~~~~~~------~~~fD~Ii~~~~~~~~-~--~~~~~l~~~~~~LkpgG~l~~ 231 (357)
+ + .++++.+|+.+... ...+|.++..+.-... + -...++..+.++++|||.+..
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t 209 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFST 209 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEE
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEe
Confidence 0 0 46778888765321 2569999986522111 0 126788999999999998765
No 407
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=91.32 E-value=2.4 Score=32.16 Aligned_cols=90 Identities=13% Similarity=0.107 Sum_probs=52.2
Q ss_pred CCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCc----c-ccCccEEEE
Q 018346 130 GHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE----M-EASYDRIYS 202 (357)
Q Consensus 130 ~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~----~-~~~fD~Ii~ 202 (357)
+.+|+=+|+| .++..+++.+ .+.+|+++|.+++.++..++. . .+.++.+|..+.. . ...+|+|+.
T Consensus 4 ~m~i~IiG~G--~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~---~---~~~~~~~d~~~~~~l~~~~~~~~d~vi~ 75 (140)
T 1lss_A 4 GMYIIIAGIG--RVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE---I---DALVINGDCTKIKTLEDAGIEDADMYIA 75 (140)
T ss_dssp -CEEEEECCS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---C---SSEEEESCTTSHHHHHHTTTTTCSEEEE
T ss_pred CCEEEEECCC--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh---c---CcEEEEcCCCCHHHHHHcCcccCCEEEE
Confidence 4688888875 4444444332 267999999998865544321 2 3456777765421 1 146899888
Q ss_pred cccccchhhHHHHHHHHHHhcccCceEEE
Q 018346 203 IEMFEHMKNYQNLLKKISKWMKEDTLLFV 231 (357)
Q Consensus 203 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 231 (357)
...-. .....+..+.+.+.++ .+++
T Consensus 76 ~~~~~---~~~~~~~~~~~~~~~~-~ii~ 100 (140)
T 1lss_A 76 VTGKE---EVNLMSSLLAKSYGIN-KTIA 100 (140)
T ss_dssp CCSCH---HHHHHHHHHHHHTTCC-CEEE
T ss_pred eeCCc---hHHHHHHHHHHHcCCC-EEEE
Confidence 75432 2223444555667775 4444
No 408
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=91.31 E-value=1.4 Score=38.04 Aligned_cols=76 Identities=20% Similarity=0.136 Sum_probs=51.0
Q ss_pred CCCEEEEECCcccHHHHHHHHHC--CCcEEEEEcC-CHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-----c------
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICN-SKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----E------ 194 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~-s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~------ 194 (357)
.+++||=.|+ +|.++..+++.+ .+.+|++++. ++..++...+.....+. ++.++.+|+.+... .
T Consensus 20 ~~k~vlItGa-sggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 97 (274)
T 1ja9_A 20 AGKVALTTGA-GRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGA-QGVAIQADISKPSEVVALFDKAVSHF 97 (274)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 4567887765 566666655543 3789999988 77766665555555444 78899999987421 0
Q ss_pred cCccEEEEcccc
Q 018346 195 ASYDRIYSIEMF 206 (357)
Q Consensus 195 ~~fD~Ii~~~~~ 206 (357)
+.+|+|+.+...
T Consensus 98 ~~~d~vi~~Ag~ 109 (274)
T 1ja9_A 98 GGLDFVMSNSGM 109 (274)
T ss_dssp SCEEEEECCCCC
T ss_pred CCCCEEEECCCC
Confidence 268999887643
No 409
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=91.30 E-value=1.1 Score=38.88 Aligned_cols=102 Identities=12% Similarity=0.041 Sum_probs=63.9
Q ss_pred CCCEEEEECCcccH---HHHHHHHHCCCcEEEEE-cCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-----c-----
Q 018346 129 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGI-CNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----E----- 194 (357)
Q Consensus 129 ~~~~vLDiGcG~G~---~~~~la~~~p~~~v~~v-D~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~----- 194 (357)
.++++|=.|++.|. ++..|+++ +++|+.+ +.+++..+.+.+.....+. ++.++.+|+.+... .
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQE--GANVVLTYNGAAEGAATAVAEIEKLGR-SALAIKADLTNAAEVEAAISAAADK 83 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECSSCHHHHHHHHHHHTTTS-CCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46788888876552 34444444 7899888 7777766666665555554 78999999987421 0
Q ss_pred -cCccEEEEccccc-------ch--hh-----------HHHHHHHHHHhcccCceEEEEe
Q 018346 195 -ASYDRIYSIEMFE-------HM--KN-----------YQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 195 -~~fD~Ii~~~~~~-------~~--~~-----------~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
+..|+++.+.... .. ++ .-.+.+.+.+.++++|.++...
T Consensus 84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 143 (259)
T 3edm_A 84 FGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFS 143 (259)
T ss_dssp HCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred hCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEc
Confidence 3789999876432 11 11 2234555666677777766643
No 410
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=91.29 E-value=1.2 Score=40.58 Aligned_cols=98 Identities=11% Similarity=0.170 Sum_probs=56.6
Q ss_pred HcCCCCCCEEEEECC--cccHHHHHHHHHCCCcEEEEE-cCCHHHHHHHHHHHHHcCCCCeEEEEe------ccCCCccc
Q 018346 124 RSRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGI-CNSKTQKEFIEEQCRVLELQNVEIIVA------DISTFEME 194 (357)
Q Consensus 124 ~~~~~~~~~vLDiGc--G~G~~~~~la~~~p~~~v~~v-D~s~~~l~~a~~~~~~~~~~~v~~~~~------d~~~~~~~ 194 (357)
...+.++.+||=+|+ |.|..+..+++.. +++++++ +.++.. +...+.++..|.+.+ +.. ++.+....
T Consensus 162 ~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~-Ga~vi~~~~~~~~~-~~~~~~~~~lGa~~v--i~~~~~~~~~~~~~~~~ 237 (357)
T 1zsy_A 162 FEQLQPGDSVIQNASNSGVGQAVIQIAAAL-GLRTINVVRDRPDI-QKLSDRLKSLGAEHV--ITEEELRRPEMKNFFKD 237 (357)
T ss_dssp SSCCCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEECCCSCH-HHHHHHHHHTTCSEE--EEHHHHHSGGGGGTTSS
T ss_pred HhccCCCCEEEEeCCcCHHHHHHHHHHHHc-CCEEEEEecCccch-HHHHHHHHhcCCcEE--EecCcchHHHHHHHHhC
Confidence 356788999999996 4688888898876 6766554 443321 111223344565322 221 11111111
Q ss_pred -cCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEE
Q 018346 195 -ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 195 -~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 232 (357)
..+|+|+-...- .. .....++|+|+|++++.
T Consensus 238 ~~~~Dvvid~~g~------~~-~~~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 238 MPQPRLALNCVGG------KS-STELLRQLARGGTMVTY 269 (357)
T ss_dssp SCCCSEEEESSCH------HH-HHHHHTTSCTTCEEEEC
T ss_pred CCCceEEEECCCc------HH-HHHHHHhhCCCCEEEEE
Confidence 148988864321 11 23567899999998774
No 411
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=91.26 E-value=1.9 Score=38.07 Aligned_cols=103 Identities=12% Similarity=0.159 Sum_probs=63.7
Q ss_pred CCCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHH-HHHHHHHHHHHcCCCCeEEEEeccCCCcc-----c------
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKT-QKEFIEEQCRVLELQNVEIIVADISTFEM-----E------ 194 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~-~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~------ 194 (357)
.+++||=.|++.| ++..+++.+ .+++|+.++.++. ..+...+.....+. ++.++.+|+.+... .
T Consensus 46 ~gk~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 46 KGKNVLITGGDSG-IGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGV-KCVLLPGDLSDEQHCKDIVQETVRQL 123 (291)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTC-CEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4678898886654 444444332 2789999998765 33334444444443 79999999987421 0
Q ss_pred cCccEEEEcccccc----h-----hh-----------HHHHHHHHHHhcccCceEEEEe
Q 018346 195 ASYDRIYSIEMFEH----M-----KN-----------YQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 195 ~~fD~Ii~~~~~~~----~-----~~-----------~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
+..|++|.+..... + ++ .-.+++.+.+.++.+|.++...
T Consensus 124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 47899998753321 1 11 2345666777788888776643
No 412
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=91.21 E-value=3.1 Score=35.92 Aligned_cols=76 Identities=8% Similarity=-0.046 Sum_probs=53.4
Q ss_pred CCCEEEEECCcccH---HHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHH-cCCCCeEEEEeccCCCcc---------c-
Q 018346 129 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRV-LELQNVEIIVADISTFEM---------E- 194 (357)
Q Consensus 129 ~~~~vLDiGcG~G~---~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~-~~~~~v~~~~~d~~~~~~---------~- 194 (357)
.++++|=.|++.|. ++..|++. +++|+.+|.+++.++.+.+.+.. .+..++.++.+|+.+... .
T Consensus 7 ~~k~~lVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (265)
T 3lf2_A 7 SEAVAVVTGGSSGIGLATVELLLEA--GAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERT 84 (265)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 46788888876542 34444444 78999999999888777776655 333368999999987421 0
Q ss_pred -cCccEEEEcccc
Q 018346 195 -ASYDRIYSIEMF 206 (357)
Q Consensus 195 -~~fD~Ii~~~~~ 206 (357)
+..|++|.+...
T Consensus 85 ~g~id~lvnnAg~ 97 (265)
T 3lf2_A 85 LGCASILVNNAGQ 97 (265)
T ss_dssp HCSCSEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 478999988754
No 413
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=91.21 E-value=0.1 Score=48.21 Aligned_cols=95 Identities=14% Similarity=0.151 Sum_probs=55.7
Q ss_pred CCCEEEEECCcc-cHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEec--------------------
Q 018346 129 DGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVAD-------------------- 187 (357)
Q Consensus 129 ~~~~vLDiGcG~-G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d-------------------- 187 (357)
++.+|+=+|+|. |..+..++..+ +++|+++|.++..++.+.+ .|. +++..+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~~~l~~~~~----lGa---~~~~l~~~~~~~~gya~~~~~~~~~~ 254 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRL-GAKTTGYDVRPEVAEQVRS----VGA---QWLDLGIDAAGEGGYARELSEAERAQ 254 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHH-TCEEEEECSSGGGHHHHHH----TTC---EECCCC-------------CHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----cCC---eEEeccccccccccchhhhhHHHHhh
Confidence 578999999984 55555555555 7899999999987666654 232 222211
Q ss_pred -cCCCccc-cCccEEEEcccccchhhHHHHHHHHHHhcccCceEEE
Q 018346 188 -ISTFEME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFV 231 (357)
Q Consensus 188 -~~~~~~~-~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 231 (357)
...+... ...|+||.......-+.+.-+-+++.+.+|||++++=
T Consensus 255 ~~~~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVD 300 (381)
T 3p2y_A 255 QQQALEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVD 300 (381)
T ss_dssp HHHHHHHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEE
T ss_pred hHHHHHHHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEE
Confidence 0001001 5789999753222111111123677788999886544
No 414
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=91.06 E-value=1.5 Score=38.45 Aligned_cols=76 Identities=12% Similarity=0.153 Sum_probs=54.0
Q ss_pred CCCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-----c------c
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----E------A 195 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~------~ 195 (357)
.++++|=.|++.| ++..+++.+ .+++|+.++.+++.++...+.....+. ++.++.+|+.+... . +
T Consensus 31 ~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~v~~~~~~~~~~~g 108 (276)
T 3r1i_A 31 SGKRALITGASTG-IGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGG-KALPIRCDVTQPDQVRGMLDQMTGELG 108 (276)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTC-CCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4678888887654 444443332 278999999999888777777766654 78899999987421 0 3
Q ss_pred CccEEEEcccc
Q 018346 196 SYDRIYSIEMF 206 (357)
Q Consensus 196 ~fD~Ii~~~~~ 206 (357)
..|++|.+...
T Consensus 109 ~iD~lvnnAg~ 119 (276)
T 3r1i_A 109 GIDIAVCNAGI 119 (276)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78999988754
No 415
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=91.00 E-value=1.6 Score=38.51 Aligned_cols=104 Identities=8% Similarity=0.055 Sum_probs=65.0
Q ss_pred CCCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCC--HHHHHHHHHHHHHcCCCCeEEEEeccCCCcc---------c-
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNS--KTQKEFIEEQCRVLELQNVEIIVADISTFEM---------E- 194 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s--~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~---------~- 194 (357)
.++++|=.|++. .++..+++.+ .+++|+.++.+ ....+...+.....+. ++.++.+|+.+... .
T Consensus 48 ~~k~vlVTGas~-GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~ 125 (294)
T 3r3s_A 48 KDRKALVTGGDS-GIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGR-KAVLLPGDLSDESFARSLVHKAREA 125 (294)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTC-CEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCC-cEEEEEecCCCHHHHHHHHHHHHHH
Confidence 467888888654 4444444332 27899999886 3444555555555554 78999999987421 0
Q ss_pred -cCccEEEEcccccc----h-----hh-----------HHHHHHHHHHhcccCceEEEEec
Q 018346 195 -ASYDRIYSIEMFEH----M-----KN-----------YQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 195 -~~fD~Ii~~~~~~~----~-----~~-----------~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
+..|+++.+..... + ++ .-.+.+.+.+.++++|.++....
T Consensus 126 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS 186 (294)
T 3r3s_A 126 LGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSS 186 (294)
T ss_dssp HTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECC
Confidence 47899998875421 1 11 23355666677778888776543
No 416
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=90.96 E-value=2.7 Score=36.45 Aligned_cols=68 Identities=15% Similarity=0.131 Sum_probs=50.3
Q ss_pred CEEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccccCccEEEEcccccc
Q 018346 131 HTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMFEH 208 (357)
Q Consensus 131 ~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~Ii~~~~~~~ 208 (357)
++||=.|| |.++..+++.+ .+.+|++++-++........ .+++++.+|+.++. ...+|+|+.......
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~D~~d~~-~~~~d~vi~~a~~~~ 75 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA-------SGAEPLLWPGEEPS-LDGVTHLLISTAPDS 75 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH-------TTEEEEESSSSCCC-CTTCCEEEECCCCBT
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh-------CCCeEEEecccccc-cCCCCEEEECCCccc
Confidence 68999994 88888887664 36799999998875433222 27899999998865 467899998776543
No 417
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=90.94 E-value=0.097 Score=45.84 Aligned_cols=53 Identities=11% Similarity=0.053 Sum_probs=38.9
Q ss_pred eEEEEeccCCCc---cccCccEEEEcccccch--------------hhHHHHHHHHHHhcccCceEEEEe
Q 018346 181 VEIIVADISTFE---MEASYDRIYSIEMFEHM--------------KNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 181 v~~~~~d~~~~~---~~~~fD~Ii~~~~~~~~--------------~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
.+++++|..+.. ..++||+|++.+|+..- ......++.+.++|+|||.+++..
T Consensus 5 ~~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 5 NKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp SSEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CeEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEc
Confidence 456777765421 12689999999998532 235677888899999999999974
No 418
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=90.87 E-value=2 Score=37.08 Aligned_cols=76 Identities=18% Similarity=0.251 Sum_probs=51.8
Q ss_pred CCCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-----c------c
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----E------A 195 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~------~ 195 (357)
.++++|=.|++. .++..+++.+ .+++|+.++.+++.++...+.....+. ++.++.+|+.+... . +
T Consensus 6 ~~k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (262)
T 1zem_A 6 NGKVCLVTGAGG-NIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGV-EARSYVCDVTSEEAVIGTVDSVVRDFG 83 (262)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTS-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 467888887654 4444444432 278999999998877766665554443 78899999987421 0 3
Q ss_pred CccEEEEcccc
Q 018346 196 SYDRIYSIEMF 206 (357)
Q Consensus 196 ~fD~Ii~~~~~ 206 (357)
..|++|.+...
T Consensus 84 ~id~lv~nAg~ 94 (262)
T 1zem_A 84 KIDFLFNNAGY 94 (262)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78999987643
No 419
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=90.85 E-value=1.5 Score=38.59 Aligned_cols=99 Identities=8% Similarity=0.012 Sum_probs=65.8
Q ss_pred CCCEEEEECCcccH---HHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc---------c--
Q 018346 129 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM---------E-- 194 (357)
Q Consensus 129 ~~~~vLDiGcG~G~---~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~---------~-- 194 (357)
+++.+|=-|++.|. ++..|++. +++|+.+|.+++.++.+.+. .+. ++.++.+|+.+... .
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~--Ga~V~i~~r~~~~l~~~~~~---~g~-~~~~~~~Dv~~~~~v~~~~~~~~~~~ 101 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAE--GARVFITGRRKDVLDAAIAE---IGG-GAVGIQADSANLAELDRLYEKVKAEA 101 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHH---HCT-TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHH---cCC-CeEEEEecCCCHHHHHHHHHHHHHHc
Confidence 57888888877663 45555555 89999999999887765443 343 77888999987421 1
Q ss_pred cCccEEEEcccccc------h--hh-----------HHHHHHHHHHhcccCceEEEEe
Q 018346 195 ASYDRIYSIEMFEH------M--KN-----------YQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 195 ~~fD~Ii~~~~~~~------~--~~-----------~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
++.|+++.|..... + ++ .-...+.+.+.|+.+|.++...
T Consensus 102 G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInis 159 (273)
T 4fgs_A 102 GRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTG 159 (273)
T ss_dssp SCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEC
T ss_pred CCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 57899998874321 1 11 2334556667788888766543
No 420
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=90.79 E-value=2.4 Score=36.70 Aligned_cols=76 Identities=12% Similarity=0.167 Sum_probs=52.8
Q ss_pred CCCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHHHHHHHHHHHHH-cCCCCeEEEEeccCCCcc-----c------
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRV-LELQNVEIIVADISTFEM-----E------ 194 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~~l~~a~~~~~~-~~~~~v~~~~~d~~~~~~-----~------ 194 (357)
.+++||=.|++. .++..+++.+ .+++|+.++.+++.++.+.+.+.. .+. ++.++.+|+.+... .
T Consensus 19 ~~k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~ 96 (266)
T 4egf_A 19 DGKRALITGATK-GIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGT-DVHTVAIDLAEPDAPAELARRAAEAF 96 (266)
T ss_dssp TTCEEEETTTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTSTTHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 467788777654 4444444332 278999999999888777666654 343 79999999987531 0
Q ss_pred cCccEEEEcccc
Q 018346 195 ASYDRIYSIEMF 206 (357)
Q Consensus 195 ~~fD~Ii~~~~~ 206 (357)
+..|++|.+...
T Consensus 97 g~id~lv~nAg~ 108 (266)
T 4egf_A 97 GGLDVLVNNAGI 108 (266)
T ss_dssp TSCSEEEEECCC
T ss_pred CCCCEEEECCCc
Confidence 378999988744
No 421
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=90.68 E-value=0.17 Score=47.17 Aligned_cols=42 Identities=14% Similarity=0.240 Sum_probs=32.2
Q ss_pred CCCEEEEECCcc-cHHHHHHHHHCCCcEEEEEcCCHHHHHHHHH
Q 018346 129 DGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFIEE 171 (357)
Q Consensus 129 ~~~~vLDiGcG~-G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~ 171 (357)
++.+|+=+|+|. |..+..++..+ +++|+++|.++..++.+++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRL-GAVVSATDVRPAAKEQVAS 231 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSTTHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHH
Confidence 568999999984 55555666666 7899999999987666544
No 422
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=90.62 E-value=2.3 Score=36.99 Aligned_cols=102 Identities=10% Similarity=0.060 Sum_probs=65.1
Q ss_pred CCCEEEEECCcccH---HHHHHHHHCCCcEEEEE-cCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-----c-----
Q 018346 129 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGI-CNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----E----- 194 (357)
Q Consensus 129 ~~~~vLDiGcG~G~---~~~~la~~~p~~~v~~v-D~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~----- 194 (357)
.++++|=.|++.|. ++..|++. +++|+.+ ..++...+...+.....+. ++.++.+|+.+... .
T Consensus 26 ~~k~~lVTGas~GIG~aia~~la~~--G~~Vv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~ 102 (267)
T 3u5t_A 26 TNKVAIVTGASRGIGAAIAARLASD--GFTVVINYAGKAAAAEEVAGKIEAAGG-KALTAQADVSDPAAVRRLFATAEEA 102 (267)
T ss_dssp -CCEEEEESCSSHHHHHHHHHHHHH--TCEEEEEESSCSHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46788888876552 44555555 7888887 4555566655555555554 78999999987421 0
Q ss_pred -cCccEEEEcccccch--------hh-----------HHHHHHHHHHhcccCceEEEEe
Q 018346 195 -ASYDRIYSIEMFEHM--------KN-----------YQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 195 -~~fD~Ii~~~~~~~~--------~~-----------~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
+..|++|.+...... ++ .-.+++.+.+.++++|.++...
T Consensus 103 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 161 (267)
T 3u5t_A 103 FGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMS 161 (267)
T ss_dssp HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 378999988754211 11 2235566677778888877654
No 423
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=90.57 E-value=1.3 Score=38.35 Aligned_cols=105 Identities=18% Similarity=0.186 Sum_probs=65.8
Q ss_pred CCCCEEEEECCc-ccHHHHHHHHHC--CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-----c-----
Q 018346 128 EDGHTVLDVGCG-WGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----E----- 194 (357)
Q Consensus 128 ~~~~~vLDiGcG-~G~~~~~la~~~--p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~----- 194 (357)
.++++||=.|++ +|.++..+++.+ .+++|+.++.+....+.+++.....+ ++.++.+|+.+... .
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~ 89 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG--SELVFPCDVADDAQIDALFASLKTH 89 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcC--CcEEEECCCCCHHHHHHHHHHHHHH
Confidence 367899999974 355555554433 27899999988665555555444443 57889999987421 0
Q ss_pred -cCccEEEEcccccc-----------h--hh-----------HHHHHHHHHHhcccCceEEEEec
Q 018346 195 -ASYDRIYSIEMFEH-----------M--KN-----------YQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 195 -~~fD~Ii~~~~~~~-----------~--~~-----------~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
+..|++|.+..+.. . .+ ...+.+.+.+.++++|.++....
T Consensus 90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 154 (271)
T 3ek2_A 90 WDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSY 154 (271)
T ss_dssp CSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred cCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEec
Confidence 36899998765422 1 11 22345556666777787766543
No 424
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=90.53 E-value=0.95 Score=43.38 Aligned_cols=90 Identities=13% Similarity=0.033 Sum_probs=56.2
Q ss_pred CCCCCEEEEECCcc-cHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccccCccEEEEccc
Q 018346 127 LEDGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEM 205 (357)
Q Consensus 127 ~~~~~~vLDiGcG~-G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~Ii~~~~ 205 (357)
..++++|+=+|+|. |......++.+ +++|+++|.++...+.++ ..|. ++ .++.+. -...|+|+....
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~-Ga~Viv~d~~~~~~~~A~----~~Ga---~~--~~l~e~--l~~aDvVi~atg 338 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQ-GARVSVTEIDPINALQAM----MEGF---DV--VTVEEA--IGDADIVVTATG 338 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHH----HTTC---EE--CCHHHH--GGGCSEEEECSS
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHH----HcCC---EE--ecHHHH--HhCCCEEEECCC
Confidence 45789999999863 44444445555 789999999998665543 3343 22 232221 146899998654
Q ss_pred ccchhhHHHHHHHHHHhcccCceEEEEe
Q 018346 206 FEHMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 206 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
-.++-+ ....+.+||||+++...
T Consensus 339 t~~~i~-----~~~l~~mk~ggilvnvG 361 (494)
T 3ce6_A 339 NKDIIM-----LEHIKAMKDHAILGNIG 361 (494)
T ss_dssp SSCSBC-----HHHHHHSCTTCEEEECS
T ss_pred CHHHHH-----HHHHHhcCCCcEEEEeC
Confidence 333211 24567799999886643
No 425
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=90.46 E-value=2.4 Score=36.97 Aligned_cols=75 Identities=12% Similarity=0.058 Sum_probs=52.4
Q ss_pred CCCEEEEECCcccH---HHHHHHHHCCCcEEEEEcC-------------CHHHHHHHHHHHHHcCCCCeEEEEeccCCCc
Q 018346 129 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICN-------------SKTQKEFIEEQCRVLELQNVEIIVADISTFE 192 (357)
Q Consensus 129 ~~~~vLDiGcG~G~---~~~~la~~~p~~~v~~vD~-------------s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~ 192 (357)
.++++|=.|++.|. ++..|++. +++|+++|. +++.++.+.+.....+. ++.++.+|+.+..
T Consensus 14 ~gk~~lVTGas~gIG~a~a~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~ 90 (280)
T 3pgx_A 14 QGRVAFITGAARGQGRSHAVRLAAE--GADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGR-KALTRVLDVRDDA 90 (280)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTC-CEEEEECCTTCHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHH
Confidence 56788888876542 34444444 789999997 67777766666665554 7899999998742
Q ss_pred c-----c------cCccEEEEcccc
Q 018346 193 M-----E------ASYDRIYSIEMF 206 (357)
Q Consensus 193 ~-----~------~~fD~Ii~~~~~ 206 (357)
. . +..|++|.+...
T Consensus 91 ~v~~~~~~~~~~~g~id~lvnnAg~ 115 (280)
T 3pgx_A 91 ALRELVADGMEQFGRLDVVVANAGV 115 (280)
T ss_dssp HHHHHHHHHHHHHCCCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCC
Confidence 1 0 378999988754
No 426
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=90.35 E-value=2.6 Score=37.64 Aligned_cols=77 Identities=12% Similarity=0.097 Sum_probs=54.2
Q ss_pred CCCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHHHHHHHHHHHHHcCCC-CeEEEEeccCCCcc-----c------
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEM-----E------ 194 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~~-----~------ 194 (357)
.+++||=.|++.| ++..+++.+ .+.+|++++.++..++.+.+.+...+.. ++.++.+|+.+... .
T Consensus 7 ~~k~vlVTGas~g-IG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 7 AGRTAFVTGGANG-VGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF 85 (319)
T ss_dssp TTCEEEEETTTST-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEcCCchH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence 4678888887654 444444332 2789999999999888777776655532 78999999987421 0
Q ss_pred cCccEEEEcccc
Q 018346 195 ASYDRIYSIEMF 206 (357)
Q Consensus 195 ~~fD~Ii~~~~~ 206 (357)
+..|++|.+...
T Consensus 86 g~id~lv~nAg~ 97 (319)
T 3ioy_A 86 GPVSILCNNAGV 97 (319)
T ss_dssp CCEEEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 367999988754
No 427
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=90.33 E-value=2 Score=37.39 Aligned_cols=76 Identities=13% Similarity=0.141 Sum_probs=53.3
Q ss_pred CCCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-----c------c
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----E------A 195 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~------~ 195 (357)
.++++|=.|++ |.++..+++.+ .+++|++++.+++.++...+.+...+. ++.++.+|+.+... . +
T Consensus 27 ~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (270)
T 3ftp_A 27 DKQVAIVTGAS-RGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGL-EGRGAVLNVNDATAVDALVESTLKEFG 104 (270)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTC-CCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 45677777754 44444444332 278999999999888877777766665 78889999987421 0 3
Q ss_pred CccEEEEcccc
Q 018346 196 SYDRIYSIEMF 206 (357)
Q Consensus 196 ~fD~Ii~~~~~ 206 (357)
..|++|.+...
T Consensus 105 ~iD~lvnnAg~ 115 (270)
T 3ftp_A 105 ALNVLVNNAGI 115 (270)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78999988754
No 428
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=90.27 E-value=3.2 Score=36.11 Aligned_cols=75 Identities=15% Similarity=0.170 Sum_probs=52.1
Q ss_pred CCCEEEEECCcccH---HHHHHHHHCCCcEEEEEcC-------------CHHHHHHHHHHHHHcCCCCeEEEEeccCCCc
Q 018346 129 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICN-------------SKTQKEFIEEQCRVLELQNVEIIVADISTFE 192 (357)
Q Consensus 129 ~~~~vLDiGcG~G~---~~~~la~~~p~~~v~~vD~-------------s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~ 192 (357)
.++++|=.|++.|. ++..|++. +++|+.+|. +++.++...+.....+. ++.++.+|+.+..
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~ 86 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAE--GADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANR-RIVAAVVDTRDFD 86 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTCHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHc--CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCC-eEEEEECCCCCHH
Confidence 46788888876542 34444544 789999998 67777666666655554 7999999998742
Q ss_pred c-----c------cCccEEEEcccc
Q 018346 193 M-----E------ASYDRIYSIEMF 206 (357)
Q Consensus 193 ~-----~------~~fD~Ii~~~~~ 206 (357)
. . +..|++|.+...
T Consensus 87 ~v~~~~~~~~~~~g~id~lvnnAg~ 111 (277)
T 3tsc_A 87 RLRKVVDDGVAALGRLDIIVANAGV 111 (277)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCC
Confidence 1 0 468999988754
No 429
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=90.19 E-value=0.22 Score=46.26 Aligned_cols=41 Identities=22% Similarity=0.242 Sum_probs=30.8
Q ss_pred CCCEEEEECCcc-cHHHHHHHHHCCCcEEEEEcCCHHHHHHHH
Q 018346 129 DGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFIE 170 (357)
Q Consensus 129 ~~~~vLDiGcG~-G~~~~~la~~~p~~~v~~vD~s~~~l~~a~ 170 (357)
++.+|+=+|+|. |..+..+++.+ +++|+++|.++...+.++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~-Ga~V~~~d~~~~~~~~~~ 212 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRL-GAVVMATDVRAATKEQVE 212 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCSTTHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHH
Confidence 578999999984 55555566666 679999999987665553
No 430
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=90.16 E-value=1.7 Score=36.62 Aligned_cols=71 Identities=21% Similarity=0.244 Sum_probs=47.6
Q ss_pred CCCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHHHHHHHHHHHHHcCCCCe-EEEEeccCCCccc--cCccEEEEc
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNV-EIIVADISTFEME--ASYDRIYSI 203 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v-~~~~~d~~~~~~~--~~fD~Ii~~ 203 (357)
.+++||=.|+ +|.++..+++.+ .+.+|++++-++..++.... . ++ .++.+|+.+.... +..|+|+.+
T Consensus 20 ~~~~ilVtGa-tG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~----~---~~~~~~~~Dl~~~~~~~~~~~D~vi~~ 91 (236)
T 3e8x_A 20 QGMRVLVVGA-NGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE----R---GASDIVVANLEEDFSHAFASIDAVVFA 91 (236)
T ss_dssp -CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----T---TCSEEEECCTTSCCGGGGTTCSEEEEC
T ss_pred CCCeEEEECC-CChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh----C---CCceEEEcccHHHHHHHHcCCCEEEEC
Confidence 4788998874 566666655443 37899999998876543322 1 67 8999998721111 578999988
Q ss_pred cccc
Q 018346 204 EMFE 207 (357)
Q Consensus 204 ~~~~ 207 (357)
....
T Consensus 92 ag~~ 95 (236)
T 3e8x_A 92 AGSG 95 (236)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 7654
No 431
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=90.14 E-value=0.36 Score=48.30 Aligned_cols=104 Identities=13% Similarity=0.157 Sum_probs=65.5
Q ss_pred CCCEEEEECCcccHHHHHHHHHC-------CC-----cEEEEEcC---CHHHHHHHHH-----------HHHHcCC----
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY-------SN-----CKITGICN---SKTQKEFIEE-----------QCRVLEL---- 178 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~-------p~-----~~v~~vD~---s~~~l~~a~~-----------~~~~~~~---- 178 (357)
+.-+|+|+|-|+|.......+.+ |. .+++++|. +++.+..+-. .......
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 44699999999999777665432 21 46899998 7777663332 1111110
Q ss_pred ----------CCeEEEEeccCCCcc------ccCccEEEEcccccch-hh--HHHHHHHHHHhcccCceEEEE
Q 018346 179 ----------QNVEIIVADISTFEM------EASYDRIYSIEMFEHM-KN--YQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 179 ----------~~v~~~~~d~~~~~~------~~~fD~Ii~~~~~~~~-~~--~~~~l~~~~~~LkpgG~l~~~ 232 (357)
-.+++..+|+.+... ...||+|+..+--... ++ ...++..+.++++|||.+...
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~ 218 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATF 218 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEES
T ss_pred ceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEec
Confidence 034566677655211 1469999986522111 11 367899999999999987653
No 432
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=90.12 E-value=2 Score=37.54 Aligned_cols=76 Identities=14% Similarity=0.097 Sum_probs=53.3
Q ss_pred CCCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-----c-----cC
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----E-----AS 196 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~-----~~ 196 (357)
.++++|=.|++ |.++..+++.+ .+++|+.+|.+++.++.+.+.....+. ++.++.+|+.+... . +.
T Consensus 32 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~~~g~ 109 (275)
T 4imr_A 32 RGRTALVTGSS-RGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGG-TAQELAGDLSEAGAGTDLIERAEAIAP 109 (275)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTC-CEEEEECCTTSTTHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCC-eEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 46788877765 44444444432 278999999998877777776666554 79999999987531 0 36
Q ss_pred ccEEEEcccc
Q 018346 197 YDRIYSIEMF 206 (357)
Q Consensus 197 fD~Ii~~~~~ 206 (357)
.|++|.+...
T Consensus 110 iD~lvnnAg~ 119 (275)
T 4imr_A 110 VDILVINASA 119 (275)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999988754
No 433
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=90.10 E-value=0.17 Score=45.86 Aligned_cols=57 Identities=11% Similarity=0.006 Sum_probs=42.3
Q ss_pred CeEEE-EeccCCCc---cccCccEEEEcccccch-----------hhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 180 NVEII-VADISTFE---MEASYDRIYSIEMFEHM-----------KNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 180 ~v~~~-~~d~~~~~---~~~~fD~Ii~~~~~~~~-----------~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
...++ ++|..+.. ..+++|+|++.+|+..- ......+..+.++|+|||.+++.....
T Consensus 38 ~~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~~ 109 (319)
T 1eg2_A 38 TRHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGLQ 109 (319)
T ss_dssp EEEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECSC
T ss_pred cceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCcc
Confidence 35667 88876521 12689999999998532 245677888899999999999986644
No 434
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=90.09 E-value=0.66 Score=48.33 Aligned_cols=74 Identities=14% Similarity=0.068 Sum_probs=52.7
Q ss_pred CCCEEEEECCcccHHHHHHHHHCCCc--EEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCC----------------
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKYSNC--KITGICNSKTQKEFIEEQCRVLELQNVEIIVADIST---------------- 190 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~p~~--~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~---------------- 190 (357)
...+++|+.||.|+++..+... |. .+.++|+++.+.+.-+.|.. +..++..|+.+
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~A--G~~~vv~avEid~~A~~ty~~N~p-----~~~~~~~DI~~l~~~~~~~di~~~~~~ 611 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQA--GISDTLWAIEMWDPAAQAFRLNNP-----GSTVFTEDCNILLKLVMAGETTNSRGQ 611 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHHH--TSEEEEEEECSSHHHHHHHHHHCT-----TSEEECSCHHHHHHHHHHTCSBCTTCC
T ss_pred CCCeEEEeccCccHHHHHHHHC--CCCceEEEEECCHHHHHHHHHhCC-----CCccccccHHHHhhhccchhhhhhhhh
Confidence 4568999999999999999877 65 57799999998777666642 34555555421
Q ss_pred -CccccCccEEEEcccccch
Q 018346 191 -FEMEASYDRIYSIEMFEHM 209 (357)
Q Consensus 191 -~~~~~~fD~Ii~~~~~~~~ 209 (357)
++..+.+|+|+..++-+.+
T Consensus 612 ~lp~~~~vDll~GGpPCQ~F 631 (1002)
T 3swr_A 612 RLPQKGDVEMLCGGPPCQGF 631 (1002)
T ss_dssp BCCCTTTCSEEEECCCCTTC
T ss_pred hcccCCCeeEEEEcCCCcch
Confidence 1112468999988865444
No 435
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=90.03 E-value=1.3 Score=38.40 Aligned_cols=74 Identities=18% Similarity=0.157 Sum_probs=57.2
Q ss_pred CCCEEEEECCcccH---HHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc---------c--
Q 018346 129 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM---------E-- 194 (357)
Q Consensus 129 ~~~~vLDiGcG~G~---~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~---------~-- 194 (357)
+++.+|=-|++.|. ++..|++. +++|+.+|.+++.++.+.+.+...|. ++.++.+|+.+... .
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~--Ga~Vv~~~~~~~~~~~~~~~i~~~g~-~~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALN--DSIVVAVELLEDRLNQIVQELRGMGK-EVLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 57788888877663 45555555 89999999999999888888877775 89999999987421 1
Q ss_pred cCccEEEEccc
Q 018346 195 ASYDRIYSIEM 205 (357)
Q Consensus 195 ~~fD~Ii~~~~ 205 (357)
++.|+++.|..
T Consensus 83 G~iDiLVNNAG 93 (254)
T 4fn4_A 83 SRIDVLCNNAG 93 (254)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCc
Confidence 57999998864
No 436
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=89.83 E-value=4 Score=37.26 Aligned_cols=92 Identities=7% Similarity=-0.023 Sum_probs=60.3
Q ss_pred CCCCEEEEECC--cccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCc------cccCccE
Q 018346 128 EDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE------MEASYDR 199 (357)
Q Consensus 128 ~~~~~vLDiGc--G~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~------~~~~fD~ 199 (357)
.++.+||=+|+ |.|..+..+++.. +++|+++. |++.++.++ ..|.+ .++...-.++. ..+.+|+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~-Ga~Vi~~~-~~~~~~~~~----~lGa~--~vi~~~~~~~~~~v~~~t~g~~d~ 234 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLS-GYIPIATC-SPHNFDLAK----SRGAE--EVFDYRAPNLAQTIRTYTKNNLRY 234 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHHH----HTTCS--EEEETTSTTHHHHHHHHTTTCCCE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHC-CCEEEEEe-CHHHHHHHH----HcCCc--EEEECCCchHHHHHHHHccCCccE
Confidence 67899999998 3788999999886 78999885 787666554 35543 12222111110 1145999
Q ss_pred EEEcccccchhhHHHHHHHHHHhc-ccCceEEEEe
Q 018346 200 IYSIEMFEHMKNYQNLLKKISKWM-KEDTLLFVHH 233 (357)
Q Consensus 200 Ii~~~~~~~~~~~~~~l~~~~~~L-kpgG~l~~~~ 233 (357)
|+-...- ...+..+.+.| ++||+++..-
T Consensus 235 v~d~~g~------~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 235 ALDCITN------VESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp EEESSCS------HHHHHHHHHHSCTTCEEEEESS
T ss_pred EEECCCc------hHHHHHHHHHhhcCCCEEEEEe
Confidence 8864331 34567778888 6999987643
No 437
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=89.80 E-value=2.9 Score=36.56 Aligned_cols=75 Identities=13% Similarity=0.186 Sum_probs=51.6
Q ss_pred CCCEEEEECCcccH---HHHHHHHHCCCcEEEEEcCC----------------HHHHHHHHHHHHHcCCCCeEEEEeccC
Q 018346 129 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNS----------------KTQKEFIEEQCRVLELQNVEIIVADIS 189 (357)
Q Consensus 129 ~~~~vLDiGcG~G~---~~~~la~~~p~~~v~~vD~s----------------~~~l~~a~~~~~~~~~~~v~~~~~d~~ 189 (357)
.++++|=.|++.|. ++..|++. +++|+++|.+ ++.++...+.....+. ++.++.+|+.
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~ 86 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQE--GADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNR-RIVTAEVDVR 86 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTC-CEEEEECCTT
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCC-ceEEEEcCCC
Confidence 46788888876552 34444544 7899999987 6666665555555444 7999999998
Q ss_pred CCcc---------c--cCccEEEEcccc
Q 018346 190 TFEM---------E--ASYDRIYSIEMF 206 (357)
Q Consensus 190 ~~~~---------~--~~fD~Ii~~~~~ 206 (357)
+... . +..|++|.+...
T Consensus 87 ~~~~v~~~~~~~~~~~g~id~lv~nAg~ 114 (286)
T 3uve_A 87 DYDALKAAVDSGVEQLGRLDIIVANAGI 114 (286)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCcc
Confidence 7421 0 478999988754
No 438
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=89.77 E-value=3.8 Score=35.04 Aligned_cols=77 Identities=10% Similarity=0.091 Sum_probs=52.0
Q ss_pred CCCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEecc--CCCcc---------c-
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADI--STFEM---------E- 194 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~--~~~~~---------~- 194 (357)
.++++|=.|++. .++..+++.+ .+++|+.+|.+++.++.+.+.....+..++.++..|+ .+... .
T Consensus 11 ~~k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (252)
T 3f1l_A 11 NDRIILVTGASD-GIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN 89 (252)
T ss_dssp TTCEEEEESTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCC-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence 467888888654 4444444332 2789999999998887776666554433788899998 43210 0
Q ss_pred -cCccEEEEcccc
Q 018346 195 -ASYDRIYSIEMF 206 (357)
Q Consensus 195 -~~fD~Ii~~~~~ 206 (357)
+..|++|.+...
T Consensus 90 ~g~id~lv~nAg~ 102 (252)
T 3f1l_A 90 YPRLDGVLHNAGL 102 (252)
T ss_dssp CSCCSEEEECCCC
T ss_pred CCCCCEEEECCcc
Confidence 378999988754
No 439
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=89.73 E-value=0.22 Score=46.55 Aligned_cols=40 Identities=18% Similarity=0.214 Sum_probs=30.7
Q ss_pred CCCEEEEECCcc-cHHHHHHHHHCCCcEEEEEcCCHHHHHHH
Q 018346 129 DGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFI 169 (357)
Q Consensus 129 ~~~~vLDiGcG~-G~~~~~la~~~p~~~v~~vD~s~~~l~~a 169 (357)
++.+|+=+|+|. |..+..+++.+ +++|+++|.++..++.+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~-Ga~V~v~D~~~~~~~~~ 211 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSL-GAIVRAFDTRPEVKEQV 211 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCGGGHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHH
Confidence 478999999984 55555666666 68999999999876655
No 440
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=89.55 E-value=3.3 Score=36.96 Aligned_cols=76 Identities=13% Similarity=0.062 Sum_probs=50.9
Q ss_pred CCCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCC------------HHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNS------------KTQKEFIEEQCRVLELQNVEIIVADISTFEM- 193 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s------------~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~- 193 (357)
.++++|=.|++.| ++..+++.+ .+++|+++|.+ ++.++...+.....+. ++.++.+|+.+...
T Consensus 45 ~gk~~lVTGas~G-IG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v 122 (317)
T 3oec_A 45 QGKVAFITGAARG-QGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGR-RIIARQADVRDLASL 122 (317)
T ss_dssp TTCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHHH
Confidence 4678887776554 444443332 27899999876 6666666555555554 79999999987421
Q ss_pred ----c------cCccEEEEcccc
Q 018346 194 ----E------ASYDRIYSIEMF 206 (357)
Q Consensus 194 ----~------~~fD~Ii~~~~~ 206 (357)
. +..|++|.+...
T Consensus 123 ~~~~~~~~~~~g~iD~lVnnAg~ 145 (317)
T 3oec_A 123 QAVVDEALAEFGHIDILVSNVGI 145 (317)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCC
Confidence 0 478999988754
No 441
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=89.40 E-value=2.4 Score=36.81 Aligned_cols=77 Identities=12% Similarity=0.070 Sum_probs=52.5
Q ss_pred CCCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCC------------HHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNS------------KTQKEFIEEQCRVLELQNVEIIVADISTFEM- 193 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s------------~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~- 193 (357)
.+++||=.|++.| ++..+++.+ .+++|+++|.+ ++.++...+.....+. ++.++.+|+.+...
T Consensus 12 ~gk~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v 89 (278)
T 3sx2_A 12 TGKVAFITGAARG-QGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGS-RIVARQADVRDRESL 89 (278)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTC-CEEEEECCTTCHHHH
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCC-eEEEEeCCCCCHHHH
Confidence 4678888886544 444443332 27899999987 6666666666555554 89999999987421
Q ss_pred ----c------cCccEEEEccccc
Q 018346 194 ----E------ASYDRIYSIEMFE 207 (357)
Q Consensus 194 ----~------~~fD~Ii~~~~~~ 207 (357)
. +..|++|.+....
T Consensus 90 ~~~~~~~~~~~g~id~lv~nAg~~ 113 (278)
T 3sx2_A 90 SAALQAGLDELGRLDIVVANAGIA 113 (278)
T ss_dssp HHHHHHHHHHHCCCCEEEECCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCC
Confidence 0 3789999887553
No 442
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=89.32 E-value=3.6 Score=35.82 Aligned_cols=77 Identities=10% Similarity=0.057 Sum_probs=53.3
Q ss_pred CCCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHHHHHHHHHHHHHcCCC--CeEEEEeccCCCcc-----c-----
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQ--NVEIIVADISTFEM-----E----- 194 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~~l~~a~~~~~~~~~~--~v~~~~~d~~~~~~-----~----- 194 (357)
.+++||=.|++. .++..+++.+ .+++|+.+|.+++.++.+.+.+...+.. ++.++.+|+.+... .
T Consensus 10 ~~k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (281)
T 3svt_A 10 QDRTYLVTGGGS-GIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW 88 (281)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 467888888654 4444444332 2789999999998887777766655432 68899999987421 0
Q ss_pred -cCccEEEEcccc
Q 018346 195 -ASYDRIYSIEMF 206 (357)
Q Consensus 195 -~~fD~Ii~~~~~ 206 (357)
+..|+++.+...
T Consensus 89 ~g~id~lv~nAg~ 101 (281)
T 3svt_A 89 HGRLHGVVHCAGG 101 (281)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 368999987754
No 443
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=89.31 E-value=1.3 Score=38.85 Aligned_cols=76 Identities=11% Similarity=0.130 Sum_probs=52.0
Q ss_pred CCCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-----c------c
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----E------A 195 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~------~ 195 (357)
.++++|=.|++.| ++..+++.+ .+++|+++|.+++.++...+.+...+. ++.++.+|+.+... . +
T Consensus 7 ~gk~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g 84 (280)
T 3tox_A 7 EGKIAIVTGASSG-IGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGG-EAAALAGDVGDEALHEALVELAVRRFG 84 (280)
T ss_dssp TTCEEEESSTTSH-HHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTC-CEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4677887776544 444444332 278999999999887777666554443 78999999987421 0 4
Q ss_pred CccEEEEcccc
Q 018346 196 SYDRIYSIEMF 206 (357)
Q Consensus 196 ~fD~Ii~~~~~ 206 (357)
..|++|.+...
T Consensus 85 ~iD~lvnnAg~ 95 (280)
T 3tox_A 85 GLDTAFNNAGA 95 (280)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78999988753
No 444
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=89.28 E-value=4.7 Score=34.96 Aligned_cols=77 Identities=16% Similarity=0.192 Sum_probs=52.7
Q ss_pred CCCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEEeccCCCcc-----c------
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEM-----E------ 194 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~-----~------ 194 (357)
.+++||=.|++ |.++..+++.+ .+++|++++.++..++...+.+...+. .++.++.+|+.+... .
T Consensus 31 ~~k~vlVTGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 109 (279)
T 1xg5_A 31 RDRLALVTGAS-GGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH 109 (279)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence 45788888754 55555554432 378999999998877766666665553 268889999887421 0
Q ss_pred cCccEEEEcccc
Q 018346 195 ASYDRIYSIEMF 206 (357)
Q Consensus 195 ~~fD~Ii~~~~~ 206 (357)
+.+|+||.+...
T Consensus 110 g~iD~vi~~Ag~ 121 (279)
T 1xg5_A 110 SGVDICINNAGL 121 (279)
T ss_dssp CCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 368999987653
No 445
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=89.27 E-value=3.8 Score=35.10 Aligned_cols=75 Identities=13% Similarity=0.131 Sum_probs=50.4
Q ss_pred CCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-----c------cC
Q 018346 130 GHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----E------AS 196 (357)
Q Consensus 130 ~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~------~~ 196 (357)
++++|=.|++ |.++..+++.+ .+++|++++.+++.++...+.....+. ++.++.+|+.+... . +.
T Consensus 2 ~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 79 (256)
T 1geg_A 2 KKVALVTGAG-QGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGG-HAVAVKVDVSDRDQVFAAVEQARKTLGG 79 (256)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred CCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 3567777754 44555554432 278999999998877666555555443 78899999987421 0 37
Q ss_pred ccEEEEcccc
Q 018346 197 YDRIYSIEMF 206 (357)
Q Consensus 197 fD~Ii~~~~~ 206 (357)
+|++|.+...
T Consensus 80 id~lv~nAg~ 89 (256)
T 1geg_A 80 FDVIVNNAGV 89 (256)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999988743
No 446
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=89.21 E-value=0.56 Score=42.88 Aligned_cols=98 Identities=10% Similarity=0.136 Sum_probs=58.9
Q ss_pred cCCCCC-CEEEEECC--cccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEe------ccCC-Cc--
Q 018346 125 SRLEDG-HTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVA------DIST-FE-- 192 (357)
Q Consensus 125 ~~~~~~-~~vLDiGc--G~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~------d~~~-~~-- 192 (357)
..+.++ .+||=.|+ |.|..+..+++.. +++++++..+++.++..++.++..|.+. ++.. |+.+ +.
T Consensus 162 ~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~-Ga~vi~~~~~~~~~~~~~~~~~~lGa~~--vi~~~~~~~~~~~~~i~~~ 238 (364)
T 1gu7_A 162 VKLTPGKDWFIQNGGTSAVGKYASQIGKLL-NFNSISVIRDRPNLDEVVASLKELGATQ--VITEDQNNSREFGPTIKEW 238 (364)
T ss_dssp SCCCTTTCEEEESCTTSHHHHHHHHHHHHH-TCEEEEEECCCTTHHHHHHHHHHHTCSE--EEEHHHHHCGGGHHHHHHH
T ss_pred hccCCCCcEEEECCCCcHHHHHHHHHHHHC-CCEEEEEecCccccHHHHHHHHhcCCeE--EEecCccchHHHHHHHHHH
Confidence 467788 99999986 4678888888876 7888888655543222223334456532 1221 1111 00
Q ss_pred ---cccCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEE
Q 018346 193 ---MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 193 ---~~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 232 (357)
....+|+|+-...- .... .+.++|+++|+++..
T Consensus 239 t~~~~~g~Dvvid~~G~------~~~~-~~~~~l~~~G~~v~~ 274 (364)
T 1gu7_A 239 IKQSGGEAKLALNCVGG------KSST-GIARKLNNNGLMLTY 274 (364)
T ss_dssp HHHHTCCEEEEEESSCH------HHHH-HHHHTSCTTCEEEEC
T ss_pred hhccCCCceEEEECCCc------hhHH-HHHHHhccCCEEEEe
Confidence 01358988865331 1223 567899999998774
No 447
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=89.19 E-value=2.9 Score=34.69 Aligned_cols=93 Identities=12% Similarity=0.098 Sum_probs=56.7
Q ss_pred EEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc--cCccEEEEccccc
Q 018346 132 TVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME--ASYDRIYSIEMFE 207 (357)
Q Consensus 132 ~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~--~~fD~Ii~~~~~~ 207 (357)
+||=.| |+|.++..+++.+ .+.+|++++-++..+... .. .+++++.+|+.+.... ..+|+||.+....
T Consensus 2 kilVtG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~-~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~ 73 (224)
T 3h2s_A 2 KIAVLG-ATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR------LG-ATVATLVKEPLVLTEADLDSVDAVVDALSVP 73 (224)
T ss_dssp EEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH------TC-TTSEEEECCGGGCCHHHHTTCSEEEECCCCC
T ss_pred EEEEEc-CCCHHHHHHHHHHHHCCCEEEEEEecccccccc------cC-CCceEEecccccccHhhcccCCEEEECCccC
Confidence 577776 4566666665543 378999999988754321 11 3789999999875322 5789999877553
Q ss_pred c----hhhHHHHHHHHHHhccc-CceEEEE
Q 018346 208 H----MKNYQNLLKKISKWMKE-DTLLFVH 232 (357)
Q Consensus 208 ~----~~~~~~~l~~~~~~Lkp-gG~l~~~ 232 (357)
+ ..........+.+.++. |+.+++.
T Consensus 74 ~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~ 103 (224)
T 3h2s_A 74 WGSGRGYLHLDFATHLVSLLRNSDTLAVFI 103 (224)
T ss_dssp TTSSCTHHHHHHHHHHHHTCTTCCCEEEEE
T ss_pred CCcchhhHHHHHHHHHHHHHHHcCCcEEEE
Confidence 1 12223344555555554 4455443
No 448
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=89.12 E-value=5.2 Score=35.49 Aligned_cols=78 Identities=15% Similarity=0.184 Sum_probs=50.0
Q ss_pred CCCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEE-EeccCCCcc-c---cCccEEE
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEII-VADISTFEM-E---ASYDRIY 201 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~-~~d~~~~~~-~---~~fD~Ii 201 (357)
++++||=.|+ +|.++..+++.+ .+.+|++++.++...+..........-.+++++ .+|+.+... . ..+|+|+
T Consensus 10 ~~~~vlVTGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 88 (342)
T 1y1p_A 10 EGSLVLVTGA-NGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA 88 (342)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred CCCEEEEECC-ccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEEE
Confidence 5678998874 566666665443 368999999988765544433322111378888 789876421 1 4689999
Q ss_pred Eccccc
Q 018346 202 SIEMFE 207 (357)
Q Consensus 202 ~~~~~~ 207 (357)
.+....
T Consensus 89 h~A~~~ 94 (342)
T 1y1p_A 89 HIASVV 94 (342)
T ss_dssp ECCCCC
T ss_pred EeCCCC
Confidence 876543
No 449
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=89.11 E-value=4.1 Score=35.04 Aligned_cols=75 Identities=16% Similarity=0.121 Sum_probs=51.2
Q ss_pred CCCEEEEECCcccHHHHHHHHHC--CCcEEEEE-cCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc---------c--
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGI-CNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM---------E-- 194 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~v-D~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~---------~-- 194 (357)
.++++|=.|++ |.++..+++.+ .+++|+.+ +.++..++...+.....+. ++.++.+|+.+... .
T Consensus 3 ~~k~vlVTGas-~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (258)
T 3oid_A 3 QNKCALVTGSS-RGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGV-KVLVVKANVGQPAKIKEMFQQIDETF 80 (258)
T ss_dssp CCCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCC-chHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45677777755 44555544432 27888886 8888877777666665554 79999999987421 0
Q ss_pred cCccEEEEccc
Q 018346 195 ASYDRIYSIEM 205 (357)
Q Consensus 195 ~~fD~Ii~~~~ 205 (357)
++.|++|.+..
T Consensus 81 g~id~lv~nAg 91 (258)
T 3oid_A 81 GRLDVFVNNAA 91 (258)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 46799998874
No 450
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=89.08 E-value=1.4 Score=40.34 Aligned_cols=91 Identities=18% Similarity=0.249 Sum_probs=58.9
Q ss_pred CCCCCEEEEEC-C-cccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-----c-cCcc
Q 018346 127 LEDGHTVLDVG-C-GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----E-ASYD 198 (357)
Q Consensus 127 ~~~~~~vLDiG-c-G~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~-~~fD 198 (357)
+.++.+||=.| + |.|..+..+++.. +++|++++ +++.++.+ +..|.+. .+ |..+... . ..+|
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~-Ga~Vi~~~-~~~~~~~~----~~lGa~~--v~--~~~~~~~~~~~~~~~g~D 250 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAW-DAHVTAVC-SQDASELV----RKLGADD--VI--DYKSGSVEEQLKSLKPFD 250 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHH----HHTTCSE--EE--ETTSSCHHHHHHTSCCBS
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEe-ChHHHHHH----HHcCCCE--EE--ECCchHHHHHHhhcCCCC
Confidence 67889999999 3 4678888888876 78999998 66655554 3445431 12 2221111 1 3689
Q ss_pred EEEEcccccchhhHHHHHHHHHHhcccCceEEEE
Q 018346 199 RIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 199 ~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 232 (357)
+|+-...-. ...+....++|++||+++..
T Consensus 251 ~vid~~g~~-----~~~~~~~~~~l~~~G~iv~~ 279 (375)
T 2vn8_A 251 FILDNVGGS-----TETWAPDFLKKWSGATYVTL 279 (375)
T ss_dssp EEEESSCTT-----HHHHGGGGBCSSSCCEEEES
T ss_pred EEEECCCCh-----hhhhHHHHHhhcCCcEEEEe
Confidence 988654321 12356667789999998764
No 451
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=89.05 E-value=5.1 Score=33.87 Aligned_cols=77 Identities=13% Similarity=0.205 Sum_probs=53.2
Q ss_pred CCCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEecc--CCCc-----c----c-
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADI--STFE-----M----E- 194 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~--~~~~-----~----~- 194 (357)
.+++||=.|++ |.++..+++.+ .+++|+.++.++..++...+.+...+..++.++..|+ .+.. . .
T Consensus 13 ~~k~vlITGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~ 91 (247)
T 3i1j_A 13 KGRVILVTGAA-RGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE 91 (247)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence 46788877765 45554444432 2789999999999888887777766645778888887 3311 0 0
Q ss_pred -cCccEEEEcccc
Q 018346 195 -ASYDRIYSIEMF 206 (357)
Q Consensus 195 -~~fD~Ii~~~~~ 206 (357)
+..|++|.+...
T Consensus 92 ~g~id~lv~nAg~ 104 (247)
T 3i1j_A 92 FGRLDGLLHNASI 104 (247)
T ss_dssp HSCCSEEEECCCC
T ss_pred CCCCCEEEECCcc
Confidence 378999988754
No 452
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=88.88 E-value=2.6 Score=37.74 Aligned_cols=88 Identities=22% Similarity=0.249 Sum_probs=56.6
Q ss_pred CCEEEEECCcc--cHHHHHHHHHCCCc--EEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCC-CccccCccEEEEcc
Q 018346 130 GHTVLDVGCGW--GSLSLYIAQKYSNC--KITGICNSKTQKEFIEEQCRVLELQNVEIIVADIST-FEMEASYDRIYSIE 204 (357)
Q Consensus 130 ~~~vLDiGcG~--G~~~~~la~~~p~~--~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~-~~~~~~fD~Ii~~~ 204 (357)
..+|.=||+|. +.++..+++. +. +|+++|.+++.++.+.+ .|. +.-...|..+ . -...|+|+..-
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~--G~~~~V~~~dr~~~~~~~a~~----~G~--~~~~~~~~~~~~--~~~aDvVilav 102 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRS--GFKGKIYGYDINPESISKAVD----LGI--IDEGTTSIAKVE--DFSPDFVMLSS 102 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHT--TCCSEEEEECSCHHHHHHHHH----TTS--CSEEESCTTGGG--GGCCSEEEECS
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC--CCCCEEEEEECCHHHHHHHHH----CCC--cchhcCCHHHHh--hccCCEEEEeC
Confidence 36899999874 3345555555 45 99999999987665543 343 1112234333 2 14579999876
Q ss_pred cccchhhHHHHHHHHHHhcccCceEE
Q 018346 205 MFEHMKNYQNLLKKISKWMKEDTLLF 230 (357)
Q Consensus 205 ~~~~~~~~~~~l~~~~~~LkpgG~l~ 230 (357)
+... ...+++++...|+||.+++
T Consensus 103 p~~~---~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 103 PVRT---FREIAKKLSYILSEDATVT 125 (314)
T ss_dssp CGGG---HHHHHHHHHHHSCTTCEEE
T ss_pred CHHH---HHHHHHHHhhccCCCcEEE
Confidence 6543 4567888888898887554
No 453
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=88.82 E-value=1.9 Score=31.63 Aligned_cols=69 Identities=17% Similarity=0.155 Sum_probs=45.2
Q ss_pred CCEEEEECCcccHHHHHHHHHC--CC-cEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc----ccCccEEEE
Q 018346 130 GHTVLDVGCGWGSLSLYIAQKY--SN-CKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----EASYDRIYS 202 (357)
Q Consensus 130 ~~~vLDiGcG~G~~~~~la~~~--p~-~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~----~~~fD~Ii~ 202 (357)
+.+|+=+|+ |.++..++..+ .+ .+|+++|.++..++... .. .+.+...|+.+... -..+|+|+.
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~~---~~~~~~~d~~~~~~~~~~~~~~d~vi~ 75 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----RM---GVATKQVDAKDEAGLAKALGGFDAVIS 75 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----TT---TCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----hC---CCcEEEecCCCHHHHHHHHcCCCEEEE
Confidence 468999998 55555544332 25 78999999988655443 11 56778888775321 146899998
Q ss_pred ccccc
Q 018346 203 IEMFE 207 (357)
Q Consensus 203 ~~~~~ 207 (357)
..+..
T Consensus 76 ~~~~~ 80 (118)
T 3ic5_A 76 AAPFF 80 (118)
T ss_dssp CSCGG
T ss_pred CCCch
Confidence 77543
No 454
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=88.74 E-value=1.7 Score=37.17 Aligned_cols=76 Identities=12% Similarity=0.071 Sum_probs=54.3
Q ss_pred CCCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-----c------c
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----E------A 195 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~------~ 195 (357)
.+++||=.|++. .++..+++.+ .+++|+.+|.+++.++...+.....+. ++.++.+|+.+... . +
T Consensus 8 ~~k~vlITGas~-giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g 85 (253)
T 3qiv_A 8 ENKVGIVTGSGG-GIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGG-TAISVAVDVSDPESAKAMADRTLAEFG 85 (253)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCC-hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 467888888654 4444444432 278999999999988877777766554 78999999987421 0 3
Q ss_pred CccEEEEcccc
Q 018346 196 SYDRIYSIEMF 206 (357)
Q Consensus 196 ~fD~Ii~~~~~ 206 (357)
..|++|.+...
T Consensus 86 ~id~li~~Ag~ 96 (253)
T 3qiv_A 86 GIDYLVNNAAI 96 (253)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 78999988754
No 455
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=88.73 E-value=2.8 Score=32.82 Aligned_cols=95 Identities=14% Similarity=0.136 Sum_probs=56.8
Q ss_pred CCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCC-HHHHHHHHHHHHHcCCCCeEEEEeccCCCcc----c-cCccEEE
Q 018346 130 GHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNS-KTQKEFIEEQCRVLELQNVEIIVADISTFEM----E-ASYDRIY 201 (357)
Q Consensus 130 ~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s-~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~----~-~~fD~Ii 201 (357)
..+|+=+|+ |.++..+++.+ .+..|+++|.+ ++..+...... . ..+.++.+|..+... . ...|+|+
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~---~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi 76 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL---G-DNADVIPGDSNDSSVLKKAGIDRCRAIL 76 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH---C-TTCEEEESCTTSHHHHHHHTTTTCSEEE
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh---c-CCCeEEEcCCCCHHHHHHcChhhCCEEE
Confidence 346777776 55666655443 26789999997 44333333221 1 157889999876321 1 5689888
Q ss_pred EcccccchhhHHHHHHHHHHhcccCceEEEEe
Q 018346 202 SIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 202 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
+...-. .....+....+.+.|...++...
T Consensus 77 ~~~~~d---~~n~~~~~~a~~~~~~~~ii~~~ 105 (153)
T 1id1_A 77 ALSDND---ADNAFVVLSAKDMSSDVKTVLAV 105 (153)
T ss_dssp ECSSCH---HHHHHHHHHHHHHTSSSCEEEEC
T ss_pred EecCCh---HHHHHHHHHHHHHCCCCEEEEEE
Confidence 865432 23344555666677777776644
No 456
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=88.47 E-value=4.1 Score=34.24 Aligned_cols=75 Identities=15% Similarity=0.049 Sum_probs=51.6
Q ss_pred CCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHHHHHHHHHHHH-HcCCCCeEEEEeccCCCcc-----c------c
Q 018346 130 GHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCR-VLELQNVEIIVADISTFEM-----E------A 195 (357)
Q Consensus 130 ~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~~l~~a~~~~~-~~~~~~v~~~~~d~~~~~~-----~------~ 195 (357)
++++|=.|++ |.++..+++.+ .+++|+.++.+++.++.+.+... ..+. ++.++.+|+.+... . +
T Consensus 2 ~k~vlITGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (235)
T 3l77_A 2 MKVAVITGAS-RGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGV-EVFYHHLDVSKAESVEEFSKKVLERFG 79 (235)
T ss_dssp CCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCC-eEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence 4577877765 44555554433 27899999999988777666554 3343 89999999987421 1 3
Q ss_pred CccEEEEcccc
Q 018346 196 SYDRIYSIEMF 206 (357)
Q Consensus 196 ~fD~Ii~~~~~ 206 (357)
..|++|.+...
T Consensus 80 ~id~li~~Ag~ 90 (235)
T 3l77_A 80 DVDVVVANAGL 90 (235)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCcc
Confidence 78999988754
No 457
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=88.43 E-value=3.7 Score=35.51 Aligned_cols=77 Identities=17% Similarity=0.103 Sum_probs=52.2
Q ss_pred CCCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHHHHHHHHHHHHHcCC-CCeEEEEeccCCCcc-----c--cCcc
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEM-----E--ASYD 198 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~-----~--~~fD 198 (357)
.++++|=.|++ |.++..+++.+ .+++|+.+|.+++.++...+.+...+. ..+.++.+|+.+... . +..|
T Consensus 9 ~~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id 87 (267)
T 3t4x_A 9 KGKTALVTGST-AGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVD 87 (267)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCS
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCC
Confidence 45778877765 44444444432 278999999999887777666655432 267888999876321 1 4789
Q ss_pred EEEEcccc
Q 018346 199 RIYSIEMF 206 (357)
Q Consensus 199 ~Ii~~~~~ 206 (357)
+++.+...
T Consensus 88 ~lv~nAg~ 95 (267)
T 3t4x_A 88 ILINNLGI 95 (267)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99988754
No 458
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=88.28 E-value=4.7 Score=35.12 Aligned_cols=104 Identities=15% Similarity=0.169 Sum_probs=62.5
Q ss_pred CCCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHHH-HHHHHHHHHHcCCCCeEEEEeccCCCcc-----c------
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQ-KEFIEEQCRVLELQNVEIIVADISTFEM-----E------ 194 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~~-l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~------ 194 (357)
.++++|=.|++ |.++..+++.+ .+++|++++.++.. .+.+.+.+...+. ++.++.+|+.+... .
T Consensus 28 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 105 (283)
T 1g0o_A 28 EGKVALVTGAG-RGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGS-DAACVKANVGVVEDIVRMFEEAVKIF 105 (283)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCC-CeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45677777765 55555555433 37899999887543 3434444444443 78899999876321 0
Q ss_pred cCccEEEEcccccch--------hh-----------HHHHHHHHHHhcccCceEEEEec
Q 018346 195 ASYDRIYSIEMFEHM--------KN-----------YQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 195 ~~fD~Ii~~~~~~~~--------~~-----------~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
+..|++|.+...... ++ ...+++.+.+.|+.+|.++....
T Consensus 106 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 164 (283)
T 1g0o_A 106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGS 164 (283)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECC
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEec
Confidence 368999988754221 11 22345666677767787766543
No 459
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=88.16 E-value=1.6 Score=37.20 Aligned_cols=76 Identities=12% Similarity=0.078 Sum_probs=52.7
Q ss_pred CCCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-----c------c
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----E------A 195 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~------~ 195 (357)
.+++||=.| |+|.++..+++.+ .+.+|++++.++..++...+.+...+. ++.++.+|+.+... . +
T Consensus 10 ~~~~vlVtG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~ 87 (255)
T 1fmc_A 10 DGKCAIITG-AGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG-QAFACRCDITSEQELSALADFAISKLG 87 (255)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEC-CccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCC-ceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 356787776 5566666666543 378999999998877666555555443 78899999886321 0 2
Q ss_pred CccEEEEcccc
Q 018346 196 SYDRIYSIEMF 206 (357)
Q Consensus 196 ~fD~Ii~~~~~ 206 (357)
.+|+||.+...
T Consensus 88 ~~d~vi~~Ag~ 98 (255)
T 1fmc_A 88 KVDILVNNAGG 98 (255)
T ss_dssp SCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78999987643
No 460
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=88.14 E-value=4.4 Score=35.36 Aligned_cols=72 Identities=13% Similarity=0.187 Sum_probs=49.4
Q ss_pred CCCEEEEECCcccH---HHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-----c------
Q 018346 129 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----E------ 194 (357)
Q Consensus 129 ~~~~vLDiGcG~G~---~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~------ 194 (357)
.++++|=.|++.|. ++..|++. +++|+++|.+++.++.+.+.. +. ++.++.+|+.+... .
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADE--GCHVLCADIDGDAADAAATKI---GC-GAAACRVDVSDEQQIIAMVDACVAAF 101 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHH---CS-SCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHc---CC-cceEEEecCCCHHHHHHHHHHHHHHc
Confidence 46788888766542 34444444 789999999988766554433 33 78899999987421 0
Q ss_pred cCccEEEEcccc
Q 018346 195 ASYDRIYSIEMF 206 (357)
Q Consensus 195 ~~fD~Ii~~~~~ 206 (357)
+..|++|.+...
T Consensus 102 g~iD~lvnnAg~ 113 (277)
T 3gvc_A 102 GGVDKLVANAGV 113 (277)
T ss_dssp SSCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 478999988754
No 461
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=88.12 E-value=0.48 Score=41.56 Aligned_cols=53 Identities=15% Similarity=0.065 Sum_probs=35.3
Q ss_pred EeccCCCccccCccEEEEcccc----cc-h--hhH----HHHHHHHHHhcccCceEEEEeccCC
Q 018346 185 VADISTFEMEASYDRIYSIEMF----EH-M--KNY----QNLLKKISKWMKEDTLLFVHHFCHK 237 (357)
Q Consensus 185 ~~d~~~~~~~~~fD~Ii~~~~~----~~-~--~~~----~~~l~~~~~~LkpgG~l~~~~~~~~ 237 (357)
..|+......+++|+|+|+..- ++ - .|. .-+++.+.++|+|||.+++..+...
T Consensus 195 ~lDfg~p~~~~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kvygga 258 (320)
T 2hwk_A 195 RLDLGIPGDVPKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGYA 258 (320)
T ss_dssp CGGGCSCTTSCCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCCC
T ss_pred ccccCCccccCcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 5566553322679999998632 22 1 222 2256667889999999999888765
No 462
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=88.02 E-value=2.4 Score=36.84 Aligned_cols=76 Identities=17% Similarity=0.149 Sum_probs=52.2
Q ss_pred CCCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-----c-------
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----E------- 194 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~------- 194 (357)
.++++|=.|++ |.++..+++.+ .+++|++++.+++.++.+.+.....+. ++.++.+|+.+... .
T Consensus 20 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~ 97 (273)
T 1ae1_A 20 KGTTALVTGGS-KGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGL-NVEGSVCDLLSRTERDKLMQTVAHVFD 97 (273)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCc-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 46788888865 45554444432 278999999999877766665555454 78899999876321 0
Q ss_pred cCccEEEEcccc
Q 018346 195 ASYDRIYSIEMF 206 (357)
Q Consensus 195 ~~fD~Ii~~~~~ 206 (357)
+..|++|.+...
T Consensus 98 g~id~lv~nAg~ 109 (273)
T 1ae1_A 98 GKLNILVNNAGV 109 (273)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCcEEEECCCC
Confidence 468999988754
No 463
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=87.95 E-value=3.9 Score=33.68 Aligned_cols=92 Identities=12% Similarity=0.149 Sum_probs=54.7
Q ss_pred EEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccc--cCccEEEEccccc
Q 018346 132 TVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME--ASYDRIYSIEMFE 207 (357)
Q Consensus 132 ~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~--~~fD~Ii~~~~~~ 207 (357)
+||=.| |+|.++..+++.+ .+.+|++++-++..+... . ++++++.+|+.+.... ..+|+|+.+....
T Consensus 2 kvlVtG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~-~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~ 72 (221)
T 3ew7_A 2 KIGIIG-ATGRAGSRILEEAKNRGHEVTAIVRNAGKITQT-------H-KDINILQKDIFDLTLSDLSDQNVVVDAYGIS 72 (221)
T ss_dssp EEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHH-------C-SSSEEEECCGGGCCHHHHTTCSEEEECCCSS
T ss_pred eEEEEc-CCchhHHHHHHHHHhCCCEEEEEEcCchhhhhc-------c-CCCeEEeccccChhhhhhcCCCEEEECCcCC
Confidence 577676 4566666655443 368999999987643321 1 3789999999875322 5689999877543
Q ss_pred c--hhhHHHHHHHHHHhccc--CceEEEE
Q 018346 208 H--MKNYQNLLKKISKWMKE--DTLLFVH 232 (357)
Q Consensus 208 ~--~~~~~~~l~~~~~~Lkp--gG~l~~~ 232 (357)
. ..........+.+.++. .+.+++.
T Consensus 73 ~~~~~~~~~~~~~l~~a~~~~~~~~~v~~ 101 (221)
T 3ew7_A 73 PDEAEKHVTSLDHLISVLNGTVSPRLLVV 101 (221)
T ss_dssp TTTTTSHHHHHHHHHHHHCSCCSSEEEEE
T ss_pred ccccchHHHHHHHHHHHHHhcCCceEEEE
Confidence 1 11122334444444443 3455543
No 464
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=87.91 E-value=1.1 Score=40.25 Aligned_cols=101 Identities=13% Similarity=0.093 Sum_probs=65.6
Q ss_pred CCEEEEECCcccH--HHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHc-------CC-----------CCeEEEEeccC
Q 018346 130 GHTVLDVGCGWGS--LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL-------EL-----------QNVEIIVADIS 189 (357)
Q Consensus 130 ~~~vLDiGcG~G~--~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~-------~~-----------~~v~~~~~d~~ 189 (357)
..+|-=||+|+=+ ++..++.. |..|+..|++++.++.+.+++... +. .++++. .|+.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~--G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~-~~l~ 82 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASG--GFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TNLA 82 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CCHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccc-cchH
Confidence 4689999998633 44445544 889999999999988877665431 11 012221 2222
Q ss_pred CCccccCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 190 TFEMEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 190 ~~~~~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
+. -...|+|+= .+.+.++-.+++++++-++++|+.++.-.+.+.
T Consensus 83 ~a--~~~ad~ViE-av~E~l~iK~~lf~~l~~~~~~~aIlaSNTSsl 126 (319)
T 3ado_A 83 EA--VEGVVHIQE-CVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCL 126 (319)
T ss_dssp HH--TTTEEEEEE-CCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSC
T ss_pred hH--hccCcEEee-ccccHHHHHHHHHHHHHHHhhhcceeehhhhhc
Confidence 10 134676653 356677778899999999999998876655544
No 465
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=87.88 E-value=1.8 Score=40.54 Aligned_cols=95 Identities=12% Similarity=0.105 Sum_probs=60.9
Q ss_pred CCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc----c-cCccEEEE
Q 018346 130 GHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----E-ASYDRIYS 202 (357)
Q Consensus 130 ~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~----~-~~fD~Ii~ 202 (357)
..+|+=+|+|. ++..+++.+ .+..|+++|.+++.++.+++ . .+.++.+|..+... . ...|+|++
T Consensus 4 ~~~viIiG~Gr--~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~---g~~vi~GDat~~~~L~~agi~~A~~viv 74 (413)
T 3l9w_A 4 GMRVIIAGFGR--FGQITGRLLLSSGVKMVVLDHDPDHIETLRK----F---GMKVFYGDATRMDLLESAGAAKAEVLIN 74 (413)
T ss_dssp CCSEEEECCSH--HHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----T---TCCCEESCTTCHHHHHHTTTTTCSEEEE
T ss_pred CCeEEEECCCH--HHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----C---CCeEEEcCCCCHHHHHhcCCCccCEEEE
Confidence 35688888763 444443322 27899999999998876653 3 45678899887421 1 56898887
Q ss_pred cccccchhhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 203 IEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 203 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
...- +.....+-...+.+.|+..+++.....
T Consensus 75 ~~~~---~~~n~~i~~~ar~~~p~~~Iiara~~~ 105 (413)
T 3l9w_A 75 AIDD---PQTNLQLTEMVKEHFPHLQIIARARDV 105 (413)
T ss_dssp CCSS---HHHHHHHHHHHHHHCTTCEEEEEESSH
T ss_pred CCCC---hHHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 5432 123334555666778888877755543
No 466
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=87.88 E-value=3 Score=35.85 Aligned_cols=73 Identities=10% Similarity=0.120 Sum_probs=49.0
Q ss_pred CCCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-----c------c
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----E------A 195 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~------~ 195 (357)
.++++|=.|++. .++..+++.+ .+++|+.+|.+++.++...+.. +. ++.++.+|+.+... . +
T Consensus 7 ~~k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g 81 (259)
T 4e6p_A 7 EGKSALITGSAR-GIGRAFAEAYVREGATVAIADIDIERARQAAAEI---GP-AAYAVQMDVTRQDSIDAAIAATVEHAG 81 (259)
T ss_dssp TTCEEEEETCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CT-TEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CC-CceEEEeeCCCHHHHHHHHHHHHHHcC
Confidence 467888888654 4444444332 2789999999988765554433 32 78899999987421 0 3
Q ss_pred CccEEEEcccc
Q 018346 196 SYDRIYSIEMF 206 (357)
Q Consensus 196 ~fD~Ii~~~~~ 206 (357)
..|++|.+...
T Consensus 82 ~id~lv~~Ag~ 92 (259)
T 4e6p_A 82 GLDILVNNAAL 92 (259)
T ss_dssp SCCEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 78999988754
No 467
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=87.73 E-value=1.8 Score=34.09 Aligned_cols=94 Identities=14% Similarity=0.197 Sum_probs=51.5
Q ss_pred CCCCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCc----c-ccCccEE
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE----M-EASYDRI 200 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~----~-~~~fD~I 200 (357)
.++.+|+=+|||. ++..+++.+ .+.+|+++|.+++.++.++. .. .+.++.+|..+.. . ...+|+|
T Consensus 17 ~~~~~v~IiG~G~--iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~~---g~~~~~~d~~~~~~l~~~~~~~ad~V 88 (155)
T 2g1u_A 17 QKSKYIVIFGCGR--LGSLIANLASSSGHSVVVVDKNEYAFHRLNS---EF---SGFTVVGDAAEFETLKECGMEKADMV 88 (155)
T ss_dssp CCCCEEEEECCSH--HHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---TC---CSEEEESCTTSHHHHHTTTGGGCSEE
T ss_pred cCCCcEEEECCCH--HHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---cC---CCcEEEecCCCHHHHHHcCcccCCEE
Confidence 3578999999863 333333221 26799999999875433221 11 3456667754321 0 1468998
Q ss_pred EEcccccchhhHHHHHHHHHHhcccCceEEEE
Q 018346 201 YSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 201 i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 232 (357)
+....-. .....+..+.+.+.|...++..
T Consensus 89 i~~~~~~---~~~~~~~~~~~~~~~~~~iv~~ 117 (155)
T 2g1u_A 89 FAFTNDD---STNFFISMNARYMFNVENVIAR 117 (155)
T ss_dssp EECSSCH---HHHHHHHHHHHHTSCCSEEEEE
T ss_pred EEEeCCc---HHHHHHHHHHHHHCCCCeEEEE
Confidence 8765432 2233333444445555555543
No 468
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=87.71 E-value=4.5 Score=35.63 Aligned_cols=77 Identities=14% Similarity=0.164 Sum_probs=51.8
Q ss_pred CCCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHHHHHHHHHHHHHcCCC--CeEEEEeccCCCcc-----c-----
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQ--NVEIIVADISTFEM-----E----- 194 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~~l~~a~~~~~~~~~~--~v~~~~~d~~~~~~-----~----- 194 (357)
.++++|=.|++ |.++..+++.+ .+++|++++.+++.++...+.+...+.. ++.++.+|+.+... .
T Consensus 25 ~~k~vlVTGas-~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 103 (297)
T 1xhl_A 25 SGKSVIITGSS-NGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK 103 (297)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence 45678877754 55555554433 2789999999998777666655544421 68899999987421 0
Q ss_pred -cCccEEEEcccc
Q 018346 195 -ASYDRIYSIEMF 206 (357)
Q Consensus 195 -~~fD~Ii~~~~~ 206 (357)
+..|++|.+...
T Consensus 104 ~g~iD~lvnnAG~ 116 (297)
T 1xhl_A 104 FGKIDILVNNAGA 116 (297)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 368999987643
No 469
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=87.59 E-value=1.8 Score=36.23 Aligned_cols=91 Identities=15% Similarity=0.131 Sum_probs=56.2
Q ss_pred EEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc----c-cCccEEEEcc
Q 018346 132 TVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----E-ASYDRIYSIE 204 (357)
Q Consensus 132 ~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~----~-~~fD~Ii~~~ 204 (357)
+|+=+|+ |.++..+++.+ .+..|+++|.+++.++...+. . .+.++.+|..+... . ..+|+|++..
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~---~---~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 73 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK---L---KATIIHGDGSHKEILRDAEVSKNDVVVILT 73 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH---S---SSEEEESCTTSHHHHHHHTCCTTCEEEECC
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH---c---CCeEEEcCCCCHHHHHhcCcccCCEEEEec
Confidence 4666775 55666655543 267999999999876544322 2 46788999876321 1 5689988765
Q ss_pred cccchhhHHHHHHHHHHhcccCceEEEEe
Q 018346 205 MFEHMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 205 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
.-. .....+..+.+.+.|...++...
T Consensus 74 ~~d---~~n~~~~~~a~~~~~~~~iia~~ 99 (218)
T 3l4b_C 74 PRD---EVNLFIAQLVMKDFGVKRVVSLV 99 (218)
T ss_dssp SCH---HHHHHHHHHHHHTSCCCEEEECC
T ss_pred CCc---HHHHHHHHHHHHHcCCCeEEEEE
Confidence 432 22344555555566666665533
No 470
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=87.54 E-value=2.2 Score=36.94 Aligned_cols=103 Identities=11% Similarity=0.083 Sum_probs=63.3
Q ss_pred CCCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCC---HHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-----c----
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNS---KTQKEFIEEQCRVLELQNVEIIVADISTFEM-----E---- 194 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s---~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~---- 194 (357)
.++++|=.|++ |.++..+++.+ .+++|+.++.+ .+.++...+.....+. ++.++.+|+.+... .
T Consensus 10 ~~k~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~ 87 (262)
T 3ksu_A 10 KNKVIVIAGGI-KNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGA-KVALYQSDLSNEEEVAKLFDFAEK 87 (262)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTC-EEEEEECCCCSHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHH
Confidence 46788888765 45666665554 37899998654 3444444444444443 78999999987421 0
Q ss_pred --cCccEEEEcccccch--------hh-----------HHHHHHHHHHhcccCceEEEEe
Q 018346 195 --ASYDRIYSIEMFEHM--------KN-----------YQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 195 --~~fD~Ii~~~~~~~~--------~~-----------~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
+..|++|.+...... ++ .-.+.+.+.+.|+++|.++...
T Consensus 88 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~is 147 (262)
T 3ksu_A 88 EFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIA 147 (262)
T ss_dssp HHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEC
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEe
Confidence 478999988753211 11 2234555666677788776643
No 471
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=87.49 E-value=4.9 Score=34.79 Aligned_cols=76 Identities=13% Similarity=0.053 Sum_probs=51.1
Q ss_pred CCCEEEEECCcccHHHHHHHHHC--CCcEEEEEcC-CHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-----c------
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICN-SKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----E------ 194 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~-s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~------ 194 (357)
.+++||=.|++ |.++..+++.+ .+++|+.++. ++..++...+.....+. ++.++.+|+.+... .
T Consensus 27 ~~k~vlVTGas-~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~d~~~v~~~~~~~~~~~ 104 (269)
T 4dmm_A 27 TDRIALVTGAS-RGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGG-EAFAVKADVSQESEVEALFAAVIERW 104 (269)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 46678877765 44444444332 2789998887 67766666666665554 78999999987421 0
Q ss_pred cCccEEEEcccc
Q 018346 195 ASYDRIYSIEMF 206 (357)
Q Consensus 195 ~~fD~Ii~~~~~ 206 (357)
+..|++|.+...
T Consensus 105 g~id~lv~nAg~ 116 (269)
T 4dmm_A 105 GRLDVLVNNAGI 116 (269)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 378999988754
No 472
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=87.20 E-value=2.7 Score=35.91 Aligned_cols=76 Identities=9% Similarity=0.119 Sum_probs=52.3
Q ss_pred CCCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-----c------c
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----E------A 195 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~------~ 195 (357)
.++++|=.|++ |.++..+++.+ .+++|++++.+++.++...+.+...+. ++.++.+|+.+... . +
T Consensus 6 ~~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~~~~g 83 (247)
T 2jah_A 6 QGKVALITGAS-SGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGA-KVHVLELDVADRQGVDAAVASTVEALG 83 (247)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 35788888865 44554444432 278999999998887766666655444 78999999987321 0 3
Q ss_pred CccEEEEcccc
Q 018346 196 SYDRIYSIEMF 206 (357)
Q Consensus 196 ~fD~Ii~~~~~ 206 (357)
..|++|.+...
T Consensus 84 ~id~lv~nAg~ 94 (247)
T 2jah_A 84 GLDILVNNAGI 94 (247)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78999987643
No 473
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=87.03 E-value=2.7 Score=36.19 Aligned_cols=76 Identities=16% Similarity=0.149 Sum_probs=51.7
Q ss_pred CCCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-----c-------
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----E------- 194 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~------- 194 (357)
.+++||=.|++ |.++..+++.+ .+++|++++.+++.++...+.....+. ++.++.+|+.+... .
T Consensus 8 ~~k~vlVTGas-~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (260)
T 2ae2_A 8 EGCTALVTGGS-RGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGF-KVEASVCDLSSRSERQELMNTVANHFH 85 (260)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 46788888764 45555544432 278999999998877766555554443 78899999987420 0
Q ss_pred cCccEEEEcccc
Q 018346 195 ASYDRIYSIEMF 206 (357)
Q Consensus 195 ~~fD~Ii~~~~~ 206 (357)
+..|++|.+...
T Consensus 86 g~id~lv~~Ag~ 97 (260)
T 2ae2_A 86 GKLNILVNNAGI 97 (260)
T ss_dssp TCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 468999988753
No 474
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=87.01 E-value=8.9 Score=36.28 Aligned_cols=95 Identities=12% Similarity=0.131 Sum_probs=59.4
Q ss_pred CCEEEEECCccc--HHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHH-------cC------CC--CeEEEEeccCCCc
Q 018346 130 GHTVLDVGCGWG--SLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRV-------LE------LQ--NVEIIVADISTFE 192 (357)
Q Consensus 130 ~~~vLDiGcG~G--~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~-------~~------~~--~v~~~~~d~~~~~ 192 (357)
-.+|.=||+|.= .++..++.. +..|+++|.+++.++.+++.... .| .+ ...+ ..|...
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~--G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~~-- 111 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARV--GISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKE-- 111 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGGG--
T ss_pred CCEEEEECcCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHHH--
Confidence 357999999862 344445544 78999999999988877653321 11 00 1222 334321
Q ss_pred cccCccEEEEcccccchhhHHHHHHHHHHhcccCceEEE
Q 018346 193 MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFV 231 (357)
Q Consensus 193 ~~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 231 (357)
-...|+||..-+ +...-...+++++...++|+.+++.
T Consensus 112 -~~~aDlVIeaVp-e~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 112 -LSTVDLVVEAVF-EDMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp -GTTCSEEEECCC-SCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred -HCCCCEEEEcCC-CCHHHHHHHHHHHHhhCCCCeEEEe
Confidence 145799887654 3333346788888888988876654
No 475
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=86.88 E-value=4.5 Score=34.80 Aligned_cols=78 Identities=12% Similarity=0.067 Sum_probs=49.5
Q ss_pred CCCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHHHHHHHHHHHHHcC-CCCeEEEEeccCCCcc-----c------
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLE-LQNVEIIVADISTFEM-----E------ 194 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~~l~~a~~~~~~~~-~~~v~~~~~d~~~~~~-----~------ 194 (357)
.+++||=.|++ |.++..+++.+ .+++|++++.+++..+.+.+.+.... -.++.++.+|+.+... .
T Consensus 6 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (267)
T 2gdz_A 6 NGKVALVTGAA-QGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF 84 (267)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence 45688888865 45554444432 27899999999876655444433211 1268899999987321 0
Q ss_pred cCccEEEEccccc
Q 018346 195 ASYDRIYSIEMFE 207 (357)
Q Consensus 195 ~~fD~Ii~~~~~~ 207 (357)
+..|++|.+....
T Consensus 85 g~id~lv~~Ag~~ 97 (267)
T 2gdz_A 85 GRLDILVNNAGVN 97 (267)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3579999887543
No 476
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=86.83 E-value=2.1 Score=37.17 Aligned_cols=77 Identities=18% Similarity=0.131 Sum_probs=49.2
Q ss_pred CCCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHHHHHHHHHHHHHcCC--CCeEEEEeccCCCcc-----c-----
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLEL--QNVEIIVADISTFEM-----E----- 194 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~~l~~a~~~~~~~~~--~~v~~~~~d~~~~~~-----~----- 194 (357)
.+++||=.|++ |.++..+++.+ .+++|++++.+++.++.+.+....... .++.++.+|+.+... .
T Consensus 5 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (278)
T 1spx_A 5 AEKVAIITGSS-NGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK 83 (278)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence 35677777754 55555554432 378999999998877665554421111 268899999987421 0
Q ss_pred -cCccEEEEcccc
Q 018346 195 -ASYDRIYSIEMF 206 (357)
Q Consensus 195 -~~fD~Ii~~~~~ 206 (357)
+..|++|.+...
T Consensus 84 ~g~id~lv~~Ag~ 96 (278)
T 1spx_A 84 FGKLDILVNNAGA 96 (278)
T ss_dssp HSCCCEEEECCC-
T ss_pred cCCCCEEEECCCC
Confidence 378999988643
No 477
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=86.75 E-value=4.5 Score=35.33 Aligned_cols=75 Identities=7% Similarity=0.052 Sum_probs=49.1
Q ss_pred CCCEEEEECCcccH---HHHHHHHHCCCcEEEEEcCCH-HHHHHHHHHHH-HcCCCCeEEEEeccCC----Ccc-----c
Q 018346 129 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSK-TQKEFIEEQCR-VLELQNVEIIVADIST----FEM-----E 194 (357)
Q Consensus 129 ~~~~vLDiGcG~G~---~~~~la~~~p~~~v~~vD~s~-~~l~~a~~~~~-~~~~~~v~~~~~d~~~----~~~-----~ 194 (357)
.++++|=.|++.|. ++..|++. +++|++++.++ +.++.+.+.+. ..+. ++.++.+|+.+ ... .
T Consensus 22 ~~k~~lVTGas~gIG~aia~~L~~~--G~~V~~~~r~~~~~~~~~~~~l~~~~~~-~~~~~~~Dv~~~~~~~~~v~~~~~ 98 (288)
T 2x9g_A 22 EAPAAVVTGAAKRIGRAIAVKLHQT--GYRVVIHYHNSAEAAVSLADELNKERSN-TAVVCQADLTNSNVLPASCEEIIN 98 (288)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHH--TCEEEEEESSCHHHHHHHHHHHHHHSTT-CEEEEECCCSCSTTHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCeEEEEeCCchHHHHHHHHHHHhhcCC-ceEEEEeecCCccCCHHHHHHHHH
Confidence 46678877765442 34444444 78999999887 66655555444 3343 78999999987 310 0
Q ss_pred ------cCccEEEEcccc
Q 018346 195 ------ASYDRIYSIEMF 206 (357)
Q Consensus 195 ------~~fD~Ii~~~~~ 206 (357)
+..|++|.+...
T Consensus 99 ~~~~~~g~iD~lvnnAG~ 116 (288)
T 2x9g_A 99 SCFRAFGRCDVLVNNASA 116 (288)
T ss_dssp HHHHHHSCCCEEEECCCC
T ss_pred HHHHhcCCCCEEEECCCC
Confidence 368999988753
No 478
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=86.64 E-value=5 Score=34.25 Aligned_cols=76 Identities=12% Similarity=0.155 Sum_probs=50.3
Q ss_pred CCCEEEEECCcccHHHHHHHHHC--CCcEEEEEcC-CHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-----c------
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICN-SKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----E------ 194 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~-s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~------ 194 (357)
.+++||=.|+ +|.++..+++.+ .+++|++++. ++..++...+.....+. ++.++.+|+.+... .
T Consensus 6 ~~k~vlITGa-sggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (261)
T 1gee_A 6 EGKVVVITGS-STGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG-EAIAVKGDVTVESDVINLVQSAIKEF 83 (261)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-EEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 3567887775 456565555443 3789999998 77766655555554443 78899999886321 0
Q ss_pred cCccEEEEcccc
Q 018346 195 ASYDRIYSIEMF 206 (357)
Q Consensus 195 ~~fD~Ii~~~~~ 206 (357)
+.+|+||.+...
T Consensus 84 g~id~li~~Ag~ 95 (261)
T 1gee_A 84 GKLDVMINNAGL 95 (261)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 268999987643
No 479
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=86.40 E-value=2.9 Score=36.88 Aligned_cols=87 Identities=13% Similarity=0.013 Sum_probs=50.8
Q ss_pred CCCEEEEECCcc-cHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEE-eccCCCccccCccEEEEcccc
Q 018346 129 DGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIV-ADISTFEMEASYDRIYSIEMF 206 (357)
Q Consensus 129 ~~~~vLDiGcG~-G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~-~d~~~~~~~~~fD~Ii~~~~~ 206 (357)
.+++|+=+|+|. |......+..+ +.+|+++|.++...+.+. ..|. .... .++.+. -...|+|+..-+.
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~-G~~V~~~dr~~~~~~~~~----~~g~---~~~~~~~l~~~--l~~aDvVi~~~p~ 223 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAAL-GAKVKVGARESDLLARIA----EMGM---EPFHISKAAQE--LRDVDVCINTIPA 223 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHH----HTTS---EEEEGGGHHHH--TTTCSEEEECCSS
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHH----HCCC---eecChhhHHHH--hcCCCEEEECCCh
Confidence 678999999863 33333333344 679999999987543332 3332 3221 122111 1568999988776
Q ss_pred cchhhHHHHHHHHHHhcccCceEEE
Q 018346 207 EHMKNYQNLLKKISKWMKEDTLLFV 231 (357)
Q Consensus 207 ~~~~~~~~~l~~~~~~LkpgG~l~~ 231 (357)
+-+.. ...+.+|||+.++-
T Consensus 224 ~~i~~------~~l~~mk~~~~lin 242 (293)
T 3d4o_A 224 LVVTA------NVLAEMPSHTFVID 242 (293)
T ss_dssp CCBCH------HHHHHSCTTCEEEE
T ss_pred HHhCH------HHHHhcCCCCEEEE
Confidence 44321 23457899887654
No 480
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=86.34 E-value=6 Score=33.57 Aligned_cols=75 Identities=16% Similarity=0.167 Sum_probs=49.1
Q ss_pred CCEEEEECCcccHHHHHHHHHC--CCcEEEEEcC-CHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-----c------c
Q 018346 130 GHTVLDVGCGWGSLSLYIAQKY--SNCKITGICN-SKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----E------A 195 (357)
Q Consensus 130 ~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~-s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~------~ 195 (357)
++++|=.|++ |.++..+++.+ .+++|+.++. +++..+...+.....+. ++.++.+|+.+... . +
T Consensus 4 ~k~~lVTGas-~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 81 (246)
T 3osu_A 4 TKSALVTGAS-RGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGV-DSFAIQANVADADEVKAMIKEVVSQFG 81 (246)
T ss_dssp SCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTS-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4567766654 45555544432 2789988876 55666666666665554 78899999987421 0 3
Q ss_pred CccEEEEcccc
Q 018346 196 SYDRIYSIEMF 206 (357)
Q Consensus 196 ~fD~Ii~~~~~ 206 (357)
..|+++.+...
T Consensus 82 ~id~lv~nAg~ 92 (246)
T 3osu_A 82 SLDVLVNNAGI 92 (246)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78999988754
No 481
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=86.25 E-value=1.5 Score=44.64 Aligned_cols=45 Identities=13% Similarity=0.028 Sum_probs=34.8
Q ss_pred CCCEEEEECCcccHHHHHHHHHC----CCc-EEEEEcCCHHHHHHHHHHH
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY----SNC-KITGICNSKTQKEFIEEQC 173 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~----p~~-~v~~vD~s~~~l~~a~~~~ 173 (357)
+..+|+|+-||.|+++.-+.... .+. -+.++|+++.+++.-+.|.
T Consensus 211 k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp EEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 34689999999999998887652 012 4679999999888777764
No 482
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=85.97 E-value=5.8 Score=35.29 Aligned_cols=98 Identities=19% Similarity=0.177 Sum_probs=57.6
Q ss_pred CCCEEEEECCcccH--HHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCccccCccEEEEcc--
Q 018346 129 DGHTVLDVGCGWGS--LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIE-- 204 (357)
Q Consensus 129 ~~~~vLDiGcG~G~--~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~Ii~~~-- 204 (357)
+..+|.=||+|..+ ++..++......+++.+|++++....+..... ...+++... .|...+ ...|+|+...
T Consensus 13 ~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~-~~~~~i~~t-~d~~~l---~~aD~Vi~aag~ 87 (303)
T 2i6t_A 13 TVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEI-FNLPNVEIS-KDLSAS---AHSKVVIFTVNS 87 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHH-HTCTTEEEE-SCGGGG---TTCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhh-hcCCCeEEe-CCHHHH---CCCCEEEEcCCC
Confidence 44689999999633 56666666333489999999864444444433 222356553 554322 4579999875
Q ss_pred ----------cccchhhHHHHHHHHHHhcccCceEEEE
Q 018346 205 ----------MFEHMKNYQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 205 ----------~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 232 (357)
.....+-...+++.+.+.- |++++++.
T Consensus 88 ~~pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~ 124 (303)
T 2i6t_A 88 LGSSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLVA 124 (303)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEEC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEc
Confidence 2233334566777777764 99998773
No 483
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=85.72 E-value=7.4 Score=33.51 Aligned_cols=73 Identities=14% Similarity=0.173 Sum_probs=47.6
Q ss_pred CCCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-----c------c
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----E------A 195 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~------~ 195 (357)
.++++|=.|++ |.++..+++.+ .+++|++++.+++.++.+.+. .+ .++.++.+|+.+... . +
T Consensus 5 ~~k~vlITGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (263)
T 2a4k_A 5 SGKTILVTGAA-SGIGRAALDLFAREGASLVAVDREERLLAEAVAA---LE-AEAIAVVADVSDPKAVEAVFAEALEEFG 79 (263)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT---CC-SSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hc-CceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 45688888765 44454444432 278999999998765544332 22 378899999987421 0 3
Q ss_pred CccEEEEcccc
Q 018346 196 SYDRIYSIEMF 206 (357)
Q Consensus 196 ~fD~Ii~~~~~ 206 (357)
..|++|.+...
T Consensus 80 ~iD~lvnnAg~ 90 (263)
T 2a4k_A 80 RLHGVAHFAGV 90 (263)
T ss_dssp CCCEEEEGGGG
T ss_pred CCcEEEECCCC
Confidence 67999988754
No 484
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=85.71 E-value=0.35 Score=44.09 Aligned_cols=96 Identities=16% Similarity=0.121 Sum_probs=56.8
Q ss_pred HHHcCCCCCCEEEEECC--cccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCc------c
Q 018346 122 CERSRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE------M 193 (357)
Q Consensus 122 ~~~~~~~~~~~vLDiGc--G~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~------~ 193 (357)
.+...+.++.+||=.|+ |.|..+..+++...+.+|++++ ++...+.++ .|.+. ++. +-.++. .
T Consensus 135 ~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-----~ga~~--~~~-~~~~~~~~~~~~~ 205 (349)
T 4a27_A 135 FEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-----DSVTH--LFD-RNADYVQEVKRIS 205 (349)
T ss_dssp HTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-----GGSSE--EEE-TTSCHHHHHHHHC
T ss_pred HHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-----cCCcE--EEc-CCccHHHHHHHhc
Confidence 34567788999999998 3577778888765457899988 555443332 34422 222 111111 0
Q ss_pred ccCccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEe
Q 018346 194 EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 233 (357)
Q Consensus 194 ~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 233 (357)
.+.+|+|+-...- ..+..+.++|+|+|++++.-
T Consensus 206 ~~g~Dvv~d~~g~-------~~~~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 206 AEGVDIVLDCLCG-------DNTGKGLSLLKPLGTYILYG 238 (349)
T ss_dssp TTCEEEEEEECC--------------CTTEEEEEEEEEEC
T ss_pred CCCceEEEECCCc-------hhHHHHHHHhhcCCEEEEEC
Confidence 1469998864321 12366778999999998754
No 485
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=85.68 E-value=3.7 Score=35.93 Aligned_cols=76 Identities=17% Similarity=0.132 Sum_probs=50.8
Q ss_pred CCCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHH-------HHHHHHHHHHHcCCCCeEEEEeccCCCcc-----c
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKT-------QKEFIEEQCRVLELQNVEIIVADISTFEM-----E 194 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~-------~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~ 194 (357)
.++++|=.|++.| ++..+++.+ .+++|++++.++. .++.+.+.....+. ++.++.+|+.+... .
T Consensus 8 ~~k~vlVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~ 85 (285)
T 3sc4_A 8 RGKTMFISGGSRG-IGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGG-QALPIVGDIRDGDAVAAAVA 85 (285)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTS-EEEEEECCTTSHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHH
Confidence 4678888887654 444444432 2789999998865 34445555555554 79999999987421 0
Q ss_pred ------cCccEEEEcccc
Q 018346 195 ------ASYDRIYSIEMF 206 (357)
Q Consensus 195 ------~~fD~Ii~~~~~ 206 (357)
+..|++|.+...
T Consensus 86 ~~~~~~g~id~lvnnAg~ 103 (285)
T 3sc4_A 86 KTVEQFGGIDICVNNASA 103 (285)
T ss_dssp HHHHHHSCCSEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCC
Confidence 378999988754
No 486
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=85.67 E-value=1.1 Score=41.83 Aligned_cols=46 Identities=9% Similarity=-0.228 Sum_probs=35.9
Q ss_pred CCEEEEECCcccHHHHHHHHHCC-CcE----EEEEcCCHHHHHHHHHHHHH
Q 018346 130 GHTVLDVGCGWGSLSLYIAQKYS-NCK----ITGICNSKTQKEFIEEQCRV 175 (357)
Q Consensus 130 ~~~vLDiGcG~G~~~~~la~~~p-~~~----v~~vD~s~~~l~~a~~~~~~ 175 (357)
..+|+|+.||.|+....+.+..- ..- |.++|+++.++..-+.+...
T Consensus 10 ~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~ 60 (403)
T 4dkj_A 10 VIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSK 60 (403)
T ss_dssp EEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCS
T ss_pred cceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCC
Confidence 46899999999999999877620 012 77899999998887777643
No 487
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=85.40 E-value=5.2 Score=33.90 Aligned_cols=74 Identities=16% Similarity=0.132 Sum_probs=49.2
Q ss_pred CCCCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-----c--cCcc
Q 018346 128 EDGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----E--ASYD 198 (357)
Q Consensus 128 ~~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~--~~fD 198 (357)
.++++||=.|++. .++..+++.+ .+++|+.++.+++.++...+.. . .++.+..+|+.+... . +..|
T Consensus 12 ~~~k~vlVTGas~-gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~~~~~~~~~~~id 86 (249)
T 3f9i_A 12 LTGKTSLITGASS-GIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL---K-DNYTIEVCNLANKEECSNLISKTSNLD 86 (249)
T ss_dssp CTTCEEEETTTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C-SSEEEEECCTTSHHHHHHHHHTCSCCS
T ss_pred CCCCEEEEECCCC-hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---c-cCccEEEcCCCCHHHHHHHHHhcCCCC
Confidence 3577888877654 4444444432 2789999999988766554433 2 278899999886321 1 4689
Q ss_pred EEEEcccc
Q 018346 199 RIYSIEMF 206 (357)
Q Consensus 199 ~Ii~~~~~ 206 (357)
+++.+...
T Consensus 87 ~li~~Ag~ 94 (249)
T 3f9i_A 87 ILVCNAGI 94 (249)
T ss_dssp EEEECCC-
T ss_pred EEEECCCC
Confidence 99988754
No 488
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=85.32 E-value=6.7 Score=33.02 Aligned_cols=75 Identities=20% Similarity=0.185 Sum_probs=49.1
Q ss_pred CCEEEEECCcccHHHHHHHHHC--CCc-------EEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-----c-
Q 018346 130 GHTVLDVGCGWGSLSLYIAQKY--SNC-------KITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----E- 194 (357)
Q Consensus 130 ~~~vLDiGcG~G~~~~~la~~~--p~~-------~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~- 194 (357)
+++||=.|+ +|.++..+++.+ .+. +|++++.++..++...+.....+. ++.++.+|+.+... .
T Consensus 2 ~k~vlITGa-sggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~ 79 (244)
T 2bd0_A 2 KHILLITGA-GKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGA-LTDTITADISDMADVRRLTTH 79 (244)
T ss_dssp CEEEEEETT-TSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTC-EEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEECC-CChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCC-eeeEEEecCCCHHHHHHHHHH
Confidence 356777775 455555554432 156 899999998877666555544343 78999999987421 0
Q ss_pred -----cCccEEEEcccc
Q 018346 195 -----ASYDRIYSIEMF 206 (357)
Q Consensus 195 -----~~fD~Ii~~~~~ 206 (357)
+..|+||.+...
T Consensus 80 ~~~~~g~id~li~~Ag~ 96 (244)
T 2bd0_A 80 IVERYGHIDCLVNNAGV 96 (244)
T ss_dssp HHHHTSCCSEEEECCCC
T ss_pred HHHhCCCCCEEEEcCCc
Confidence 368999987643
No 489
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=85.27 E-value=3.5 Score=37.05 Aligned_cols=95 Identities=14% Similarity=0.096 Sum_probs=59.7
Q ss_pred CEEEEECCcc--cHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHH-------HcCC-C----------CeEEEEeccCC
Q 018346 131 HTVLDVGCGW--GSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCR-------VLEL-Q----------NVEIIVADIST 190 (357)
Q Consensus 131 ~~vLDiGcG~--G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~-------~~~~-~----------~v~~~~~d~~~ 190 (357)
.+|-=||+|. +.++..+++. +.+|++.|.+++.++.+.+... ..|+ + ++++. .|..+
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~-~~~~e 83 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASG--GFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TNLAE 83 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CCHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEe-CCHHH
Confidence 5788899885 3455556655 7899999999999888866432 1231 1 23432 23222
Q ss_pred CccccCccEEEEcccccchhhHHHHHHHHHHhcccCceEEE
Q 018346 191 FEMEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFV 231 (357)
Q Consensus 191 ~~~~~~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 231 (357)
. -...|+|+..-+ +...-...+++++...++|+.+++.
T Consensus 84 a--v~~aDlVieavp-e~~~~k~~v~~~l~~~~~~~~Ii~s 121 (319)
T 2dpo_A 84 A--VEGVVHIQECVP-ENLDLKRKIFAQLDSIVDDRVVLSS 121 (319)
T ss_dssp H--TTTEEEEEECCC-SCHHHHHHHHHHHHTTCCSSSEEEE
T ss_pred H--HhcCCEEEEecc-CCHHHHHHHHHHHHhhCCCCeEEEE
Confidence 1 145798887654 2222346778888888888876543
No 490
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=85.22 E-value=2.4 Score=36.38 Aligned_cols=75 Identities=9% Similarity=-0.071 Sum_probs=54.3
Q ss_pred CCCEEEEECCcccH---HHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-----c-----c
Q 018346 129 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----E-----A 195 (357)
Q Consensus 129 ~~~~vLDiGcG~G~---~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~-----~ 195 (357)
.++++|=.|++.|. ++..|++. +++|+++|.+++.++.+.+.+...+. ++.++.+|+.+... . +
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~g 82 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAE--GFTVFAGRRNGEKLAPLVAEIEAAGG-RIVARSLDARNEDEVTAFLNAADAHA 82 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHT--TCEEEEEESSGGGGHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEECcCCCHHHHHHHHHHHHhhC
Confidence 46788888876552 34444444 78999999999888887777766654 79999999987421 0 3
Q ss_pred CccEEEEcccc
Q 018346 196 SYDRIYSIEMF 206 (357)
Q Consensus 196 ~fD~Ii~~~~~ 206 (357)
..|++|.+...
T Consensus 83 ~id~lv~nAg~ 93 (252)
T 3h7a_A 83 PLEVTIFNVGA 93 (252)
T ss_dssp CEEEEEECCCC
T ss_pred CceEEEECCCc
Confidence 68999988754
No 491
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=84.90 E-value=7.8 Score=33.37 Aligned_cols=76 Identities=9% Similarity=0.047 Sum_probs=50.9
Q ss_pred CCCEEEEECCcccHHHHHHHHHC--CCcEEEEE-cCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-----c------
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGI-CNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----E------ 194 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~v-D~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~------ 194 (357)
++++||=.|++ |.++..+++.+ .+++|+.+ +.+++..+...+.....+. ++.++.+|+.+... .
T Consensus 25 ~~k~vlITGas-~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~ 102 (272)
T 4e3z_A 25 DTPVVLVTGGS-RGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGG-EAVAIPGDVGNAADIAAMFSAVDRQF 102 (272)
T ss_dssp CSCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 45677777754 55555555443 27888776 7778777766666665554 78999999987421 0
Q ss_pred cCccEEEEcccc
Q 018346 195 ASYDRIYSIEMF 206 (357)
Q Consensus 195 ~~fD~Ii~~~~~ 206 (357)
+..|++|.+...
T Consensus 103 g~id~li~nAg~ 114 (272)
T 4e3z_A 103 GRLDGLVNNAGI 114 (272)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 368999987654
No 492
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=84.89 E-value=4 Score=35.09 Aligned_cols=76 Identities=16% Similarity=0.161 Sum_probs=51.0
Q ss_pred CCCEEEEECCcccHHHHHHHHHC--CCcEEEEEcCCHHHHHHHHHHHHHc-CCCCeEEEEeccCCCcc-----c------
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVL-ELQNVEIIVADISTFEM-----E------ 194 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~--p~~~v~~vD~s~~~l~~a~~~~~~~-~~~~v~~~~~d~~~~~~-----~------ 194 (357)
.+++||=.|++ |.++..+++.+ .+++|++++.+++.++.+.+..... +. ++.++.+|+.+... .
T Consensus 6 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (263)
T 3ai3_A 6 SGKVAVITGSS-SGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGV-RVLEVAVDVATPEGVDAVVESVRSSF 83 (263)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 35788888765 44555544432 2789999999988776655554433 43 78899999987421 0
Q ss_pred cCccEEEEcccc
Q 018346 195 ASYDRIYSIEMF 206 (357)
Q Consensus 195 ~~fD~Ii~~~~~ 206 (357)
+..|++|.+...
T Consensus 84 g~id~lv~~Ag~ 95 (263)
T 3ai3_A 84 GGADILVNNAGT 95 (263)
T ss_dssp SSCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 378999988754
No 493
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=84.79 E-value=4.7 Score=32.46 Aligned_cols=91 Identities=9% Similarity=-0.020 Sum_probs=52.4
Q ss_pred CCEEEEECCcccHHHHHHHHHC--C-CcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCc----c--ccCccEE
Q 018346 130 GHTVLDVGCGWGSLSLYIAQKY--S-NCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE----M--EASYDRI 200 (357)
Q Consensus 130 ~~~vLDiGcG~G~~~~~la~~~--p-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~----~--~~~fD~I 200 (357)
+.+|+=+||| .++..+++.+ . +.+|+++|.+++.++.+++ . .+.++.+|..+.. . ...+|+|
T Consensus 39 ~~~v~IiG~G--~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~----~---g~~~~~gd~~~~~~l~~~~~~~~ad~v 109 (183)
T 3c85_A 39 HAQVLILGMG--RIGTGAYDELRARYGKISLGIEIREEAAQQHRS----E---GRNVISGDATDPDFWERILDTGHVKLV 109 (183)
T ss_dssp TCSEEEECCS--HHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH----T---TCCEEECCTTCHHHHHTBCSCCCCCEE
T ss_pred CCcEEEECCC--HHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH----C---CCCEEEcCCCCHHHHHhccCCCCCCEE
Confidence 5689988875 4444444332 2 5689999999987655432 3 3455677765421 1 1468988
Q ss_pred EEcccccchhhHHHHHHHHHHhcccCceEEEE
Q 018346 201 YSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 232 (357)
Q Consensus 201 i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 232 (357)
+....-. .....+-...+.+.|++.++..
T Consensus 110 i~~~~~~---~~~~~~~~~~~~~~~~~~ii~~ 138 (183)
T 3c85_A 110 LLAMPHH---QGNQTALEQLQRRNYKGQIAAI 138 (183)
T ss_dssp EECCSSH---HHHHHHHHHHHHTTCCSEEEEE
T ss_pred EEeCCCh---HHHHHHHHHHHHHCCCCEEEEE
Confidence 8754321 1122223344556777777664
No 494
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=84.67 E-value=14 Score=37.34 Aligned_cols=101 Identities=12% Similarity=0.141 Sum_probs=67.8
Q ss_pred CEEEEECCcccHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHc-----------CC----CCeEEEEeccCCCcccc
Q 018346 131 HTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL-----------EL----QNVEIIVADISTFEMEA 195 (357)
Q Consensus 131 ~~vLDiGcG~G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~-----------~~----~~v~~~~~d~~~~~~~~ 195 (357)
.+|-=||+|+-+-++...-...+..|+..|++++.++.+++..... .. .++. ...|..++ .
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~l---~ 392 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLR-FSSSTKEL---S 392 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEE-EESCGGGG---G
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhc-ccCcHHHH---h
Confidence 5899999997544443333333899999999999998887755321 00 1222 12222222 4
Q ss_pred CccEEEEcccccchhhHHHHHHHHHHhcccCceEEEEeccC
Q 018346 196 SYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 236 (357)
Q Consensus 196 ~fD~Ii~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 236 (357)
..|+||= .+.+.++-..++++++-.+++|+.++.-.+.+.
T Consensus 393 ~aDlVIE-AV~E~l~iK~~vf~~le~~~~~~aIlASNTSsl 432 (742)
T 3zwc_A 393 TVDLVVE-AVFEDMNLKKKVFAELSALCKPGAFLCTNTSAL 432 (742)
T ss_dssp SCSEEEE-CCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSS
T ss_pred hCCEEEE-eccccHHHHHHHHHHHhhcCCCCceEEecCCcC
Confidence 5787774 367778778899999999999999877655544
No 495
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=84.52 E-value=1.8 Score=46.49 Aligned_cols=74 Identities=14% Similarity=0.075 Sum_probs=52.3
Q ss_pred CCCEEEEECCcccHHHHHHHHHCCCc--EEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCC----------------
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQKYSNC--KITGICNSKTQKEFIEEQCRVLELQNVEIIVADIST---------------- 190 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~~p~~--~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~---------------- 190 (357)
+..+++|+.||.|+++..+... |. .+.++|+++.+++.-+.|.. ...++..|+.+
T Consensus 850 ~~l~viDLFsG~GGlslGfe~A--G~~~vv~avEid~~A~~ty~~N~p-----~~~~~~~DI~~l~~~~~~gdi~~~~~~ 922 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQA--GISETLWAIEMWDPAAQAFRLNNP-----GTTVFTEDCNVLLKLVMAGEVTNSLGQ 922 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHT--TSEEEEEEECCSHHHHHHHHHHCT-----TSEEECSCHHHHHHHHTTTCSBCSSCC
T ss_pred CCceEEecccCccHHHHHHHHC--CCCceEEEEECCHHHHHHHHHhCC-----CCcEeeccHHHHhHhhhccchhhhhhh
Confidence 4568999999999999998876 54 47799999998877766642 33445544321
Q ss_pred -CccccCccEEEEcccccch
Q 018346 191 -FEMEASYDRIYSIEMFEHM 209 (357)
Q Consensus 191 -~~~~~~fD~Ii~~~~~~~~ 209 (357)
++..+.+|+|+..++-+.+
T Consensus 923 ~lp~~~~vDvl~GGpPCQ~F 942 (1330)
T 3av4_A 923 RLPQKGDVEMLCGGPPCQGF 942 (1330)
T ss_dssp BCCCTTTCSEEEECCCCTTT
T ss_pred hccccCccceEEecCCCccc
Confidence 1112468999988876554
No 496
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=84.46 E-value=2.2 Score=36.98 Aligned_cols=74 Identities=18% Similarity=0.175 Sum_probs=47.8
Q ss_pred CCCEEEEECC-cccHHHHHHHHHC--CCcEEEEEcCCHHH-HHHHHHHHHHcCCCCeEEEEeccCCCcc-----c-----
Q 018346 129 DGHTVLDVGC-GWGSLSLYIAQKY--SNCKITGICNSKTQ-KEFIEEQCRVLELQNVEIIVADISTFEM-----E----- 194 (357)
Q Consensus 129 ~~~~vLDiGc-G~G~~~~~la~~~--p~~~v~~vD~s~~~-l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~----- 194 (357)
.++++|=.|+ |+|.++..+++.+ .+++|+.++.++.. ++... ...+ .++.++.+|+.+... .
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRIT---DRLP-AKAPLLELDVQNEEHLASLAGRVTEA 81 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHH---TTSS-SCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHH---HhcC-CCceEEEccCCCHHHHHHHHHHHHHH
Confidence 4678999998 3666666665543 37899999987653 22222 1222 267889999887321 0
Q ss_pred -c---CccEEEEcccc
Q 018346 195 -A---SYDRIYSIEMF 206 (357)
Q Consensus 195 -~---~fD~Ii~~~~~ 206 (357)
+ ..|++|.+...
T Consensus 82 ~g~~~~iD~lv~nAg~ 97 (269)
T 2h7i_A 82 IGAGNKLDGVVHSIGF 97 (269)
T ss_dssp HCTTCCEEEEEECCCC
T ss_pred hCCCCCceEEEECCcc
Confidence 2 78999987653
No 497
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=84.35 E-value=3.7 Score=36.32 Aligned_cols=87 Identities=14% Similarity=0.075 Sum_probs=51.0
Q ss_pred CCCEEEEECCcc-cHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEE-eccCCCccccCccEEEEcccc
Q 018346 129 DGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIV-ADISTFEMEASYDRIYSIEMF 206 (357)
Q Consensus 129 ~~~~vLDiGcG~-G~~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~-~d~~~~~~~~~fD~Ii~~~~~ 206 (357)
.+.+|+=+|+|. |......+..+ +.+|++.|.++...+.+. ..+. .... .++.+. -...|+|+...+.
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~-G~~V~~~d~~~~~~~~~~----~~g~---~~~~~~~l~~~--l~~aDvVi~~~p~ 225 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAAL-GANVKVGARSSAHLARIT----EMGL---VPFHTDELKEH--VKDIDICINTIPS 225 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHH----HTTC---EEEEGGGHHHH--STTCSEEEECCSS
T ss_pred CCCEEEEEcccHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHH----HCCC---eEEchhhHHHH--hhCCCEEEECCCh
Confidence 578999999864 33222333344 679999999987543332 2332 3222 122111 1568999988776
Q ss_pred cchhhHHHHHHHHHHhcccCceEEE
Q 018346 207 EHMKNYQNLLKKISKWMKEDTLLFV 231 (357)
Q Consensus 207 ~~~~~~~~~l~~~~~~LkpgG~l~~ 231 (357)
+-+.. ...+.+|||+.++-
T Consensus 226 ~~i~~------~~~~~mk~g~~lin 244 (300)
T 2rir_A 226 MILNQ------TVLSSMTPKTLILD 244 (300)
T ss_dssp CCBCH------HHHTTSCTTCEEEE
T ss_pred hhhCH------HHHHhCCCCCEEEE
Confidence 44321 24467899886544
No 498
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=84.24 E-value=4.1 Score=34.97 Aligned_cols=75 Identities=7% Similarity=-0.026 Sum_probs=54.3
Q ss_pred CCCEEEEECCcccH---HHHHHHHHCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCeEEEEeccCCCcc-----c------
Q 018346 129 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----E------ 194 (357)
Q Consensus 129 ~~~~vLDiGcG~G~---~~~~la~~~p~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~------ 194 (357)
.++++|=.|++.|. ++..|++. +++|+.+|.+++.++...+.+...+. ++.++.+|+.+... .
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~ 87 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKA--GASVVVTDLKSEGAEAVAAAIRQAGG-KAIGLECNVTDEQHREAVIKAALDQF 87 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 46788888766542 44445555 78999999999888877777766654 89999999987421 0
Q ss_pred cCccEEEEcccc
Q 018346 195 ASYDRIYSIEMF 206 (357)
Q Consensus 195 ~~fD~Ii~~~~~ 206 (357)
+..|+++.+...
T Consensus 88 g~id~lv~nAg~ 99 (256)
T 3gaf_A 88 GKITVLVNNAGG 99 (256)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 378999988754
No 499
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=84.20 E-value=23 Score=31.82 Aligned_cols=105 Identities=11% Similarity=0.088 Sum_probs=70.7
Q ss_pred CCCEEEEECCcccHHHHHHHHH-CCCcEEEEEcCCHHHHHHHHHHHHHc-----------------------CCCCeEEE
Q 018346 129 DGHTVLDVGCGWGSLSLYIAQK-YSNCKITGICNSKTQKEFIEEQCRVL-----------------------ELQNVEII 184 (357)
Q Consensus 129 ~~~~vLDiGcG~G~~~~~la~~-~p~~~v~~vD~s~~~l~~a~~~~~~~-----------------------~~~~v~~~ 184 (357)
+...|+-+|||.=.....+... .++..++=+|. |+.++.=++.+... ..++..++
T Consensus 90 ~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v 168 (334)
T 3iei_A 90 CHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVI 168 (334)
T ss_dssp TCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEE
T ss_pred CCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEE
Confidence 4578999999998888877754 24678889998 66665444444321 02378899
Q ss_pred EeccCCCc----------cc-cCccEEEEcccccch--hhHHHHHHHHHHhcccCceEEEEec
Q 018346 185 VADISTFE----------ME-ASYDRIYSIEMFEHM--KNYQNLLKKISKWMKEDTLLFVHHF 234 (357)
Q Consensus 185 ~~d~~~~~----------~~-~~fD~Ii~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~ 234 (357)
.+|+.+.. +. ...-++++-.++.++ +....+++.+.+...+|..++.+..
T Consensus 169 ~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f~~~~~i~yE~i 231 (334)
T 3iei_A 169 GADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSFERAMFINYEQV 231 (334)
T ss_dssp ECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHCSSEEEEEEEEC
T ss_pred ccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhCCCceEEEEecc
Confidence 99987631 11 234478888888888 4567788888877655555544443
No 500
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=84.18 E-value=6.6 Score=34.01 Aligned_cols=75 Identities=13% Similarity=0.113 Sum_probs=49.5
Q ss_pred CCCEEEEECCcccH---HHHHHHHHCCCcEEEEEcCCHHH-------HHHHHHHHHHcCCCCeEEEEeccCCCcc-----
Q 018346 129 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQ-------KEFIEEQCRVLELQNVEIIVADISTFEM----- 193 (357)
Q Consensus 129 ~~~~vLDiGcG~G~---~~~~la~~~p~~~v~~vD~s~~~-------l~~a~~~~~~~~~~~v~~~~~d~~~~~~----- 193 (357)
.++++|=.|++.|. ++..|++. +++|+.++.+... ++...+.....+. ++.++.+|+.+...
T Consensus 5 ~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~ 81 (274)
T 3e03_A 5 SGKTLFITGASRGIGLAIALRAARD--GANVAIAAKSAVANPKLPGTIHSAAAAVNAAGG-QGLALKCDIREEDQVRAAV 81 (274)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTS-EEEEEECCTTCHHHHHHHH
T ss_pred CCcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeccchhhhhhHHHHHHHHHHHHhcCC-eEEEEeCCCCCHHHHHHHH
Confidence 46788888877552 34444544 7899999887642 4444444444444 78999999987421
Q ss_pred ----c--cCccEEEEcccc
Q 018346 194 ----E--ASYDRIYSIEMF 206 (357)
Q Consensus 194 ----~--~~fD~Ii~~~~~ 206 (357)
. +..|++|.+...
T Consensus 82 ~~~~~~~g~iD~lvnnAG~ 100 (274)
T 3e03_A 82 AATVDTFGGIDILVNNASA 100 (274)
T ss_dssp HHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHcCCCCEEEECCCc
Confidence 0 478999988754
Done!