BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018348
(357 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 86/182 (47%), Gaps = 24/182 (13%)
Query: 17 PMKWAMRLRVVLHLAQALEY----CTSKGRALYHDLNAYRILFDEDGNPRLSTFGL---- 68
P+ W R R+ L A+ L Y C K ++ D+ A IL DE+ + FGL
Sbjct: 127 PLDWPKRQRIALGSARGLAYLHDHCDPK--IIHRDVKAANILLDEEFEAVVGDFGLAKLM 184
Query: 69 -MKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL---- 123
K+ + + PEYL TG+ + ++ ++ +G +LL+L++G+ L
Sbjct: 185 DYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDD 244
Query: 124 ---------DLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174
L++++ L+ L D L+G + D++ +L+++A C Q P ERP +V
Sbjct: 245 DVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVR 304
Query: 175 AL 176
L
Sbjct: 305 ML 306
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 24/183 (13%)
Query: 17 PMKWAMRLRVVLHLAQALEY----CTSKGRALYHDLNAYRILFDEDGNPRLSTFGL---- 68
P+ W R R+ L A+ L Y C K ++ D+ A IL DE+ + FGL
Sbjct: 135 PLDWPKRQRIALGSARGLAYLHDHCDPK--IIHRDVKAANILLDEEFEAVVGDFGLAKLM 192
Query: 69 -MKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL---- 123
K+ + + PEYL TG+ + ++ ++ +G +LL+L++G+ L
Sbjct: 193 DYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDD 252
Query: 124 ---------DLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 174
L++++ L+ L D L+G + D++ +L+++A C Q P ERP +V
Sbjct: 253 DVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVR 312
Query: 175 ALS 177
L
Sbjct: 313 MLE 315
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 88/188 (46%), Gaps = 22/188 (11%)
Query: 1 MPNETLAKHLFHWE--THPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDE 57
M N L +HL+ + T M W RL + + A+ L Y + RA+ H D+ + IL DE
Sbjct: 117 MENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT--RAIIHRDVKSINILLDE 174
Query: 58 DGNPRLSTFGLMKNSRD-GKSY-----STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 111
+ P+++ FG+ K + G+++ L + PEY GR+T +S +YSFG +L ++
Sbjct: 175 NFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEV 234
Query: 112 LSGKHIP----PSHALDLI-------RDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 160
L + P ++L + L+ + D L + + + A +CL
Sbjct: 235 LCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLA 294
Query: 161 YEPRERPN 168
+RP+
Sbjct: 295 LSSEDRPS 302
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 63/124 (50%), Gaps = 11/124 (8%)
Query: 1 MPNETLAKHLFHWE--THPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDE 57
M N L +HL+ + T M W RL + + A+ L Y + RA+ H D+ + IL DE
Sbjct: 117 MENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT--RAIIHRDVKSINILLDE 174
Query: 58 DGNPRLSTFGLMKNSRD------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 111
+ P+++ FG+ K + L + PEY GR+T +S +YSFG +L ++
Sbjct: 175 NFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEV 234
Query: 112 LSGK 115
L +
Sbjct: 235 LCAR 238
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 28/193 (14%)
Query: 1 MPNETLAKHLFHWE-THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG 59
MPN +L L + T P+ W MR ++ A + + + ++ D+ + IL DE
Sbjct: 112 MPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFL-HENHHIHRDIKSANILLDEAF 170
Query: 60 NPRLSTFGLMKNSRD------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 113
++S FGL + S A+ PE LR G +TP+S IYSFG +LL++++
Sbjct: 171 TAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIIT 229
Query: 114 GKHIPPSHALDLIRDRNLQMLTDSC-----------LEGQFTDDDGTE---LVRLASRCL 159
G +P A+D R+ L + ++ + D D T + +AS+CL
Sbjct: 230 G--LP---AVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCL 284
Query: 160 QYEPRERPNPKSL 172
+ +RP+ K +
Sbjct: 285 HEKKNKRPDIKKV 297
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 28/193 (14%)
Query: 1 MPNETLAKHLFHWE-THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG 59
MPN +L L + T P+ W MR ++ A + + + ++ D+ + IL DE
Sbjct: 112 MPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFL-HENHHIHRDIKSANILLDEAF 170
Query: 60 NPRLSTFGLMKNSRD------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 113
++S FGL + S A+ PE LR G +TP+S IYSFG +LL++++
Sbjct: 171 TAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIIT 229
Query: 114 GKHIPPSHALDLIRDRNLQMLTDSC-----------LEGQFTDDDGTE---LVRLASRCL 159
G +P A+D R+ L + ++ + D D T + +AS+CL
Sbjct: 230 G--LP---AVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCL 284
Query: 160 QYEPRERPNPKSL 172
+ +RP+ K +
Sbjct: 285 HEKKNKRPDIKKV 297
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 28/193 (14%)
Query: 1 MPNETLAKHLFHWE-THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG 59
MPN +L L + T P+ W MR ++ A + + + ++ D+ + IL DE
Sbjct: 106 MPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFL-HENHHIHRDIKSANILLDEAF 164
Query: 60 NPRLSTFGLMKNSRD------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 113
++S FGL + S A+ PE LR G +TP+S IYSFG +LL++++
Sbjct: 165 TAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIIT 223
Query: 114 GKHIPPSHALDLIRDRNLQMLTDSC-----------LEGQFTDDDGTE---LVRLASRCL 159
G +P A+D R+ L + ++ + D D T + +AS+CL
Sbjct: 224 G--LP---AVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCL 278
Query: 160 QYEPRERPNPKSL 172
+ +RP+ K +
Sbjct: 279 HEKKNKRPDIKKV 291
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 28/192 (14%)
Query: 2 PNETLAKHLFHWE-THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 60
PN +L L + T P+ W R ++ A + + + ++ D+ + IL DE
Sbjct: 104 PNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFL-HENHHIHRDIKSANILLDEAFT 162
Query: 61 PRLSTFGLMKNSRD------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSG 114
++S FGL + S A+ PE LR G +TP+S IYSFG +LL++++G
Sbjct: 163 AKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITG 221
Query: 115 KHIPPSHALDLIRDRNLQMLTDSC-----------LEGQFTDDDGTEL---VRLASRCLQ 160
+P A+D R+ L + ++ + D D T + +AS+CL
Sbjct: 222 --LP---AVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKXNDADSTSVEAXYSVASQCLH 276
Query: 161 YEPRERPNPKSL 172
+ +RP+ K +
Sbjct: 277 EKKNKRPDIKKV 288
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 13/165 (7%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-- 81
L++V A +EY SK ++ DL A L E ++S FG+ + DG ++
Sbjct: 216 LQMVGDAAAGMEYLESKC-CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGL 274
Query: 82 ----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTD 136
+ +T PE L GR + ES ++SFG LL + S G P+ + R+ +
Sbjct: 275 RQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRL 334
Query: 137 SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 181
C E D + RL +C YEP +RP+ ++ L ++K
Sbjct: 335 PCPE--LCPD---AVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 13/165 (7%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-- 81
L++V A +EY SK ++ DL A L E ++S FG+ + DG ++
Sbjct: 216 LQMVGDAAAGMEYLESKC-CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGL 274
Query: 82 ----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTD 136
+ +T PE L GR + ES ++SFG LL + S G P+ + R+ +
Sbjct: 275 RQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRL 334
Query: 137 SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 181
C E D + RL +C YEP +RP+ ++ L ++K
Sbjct: 335 PCPE--LCPD---AVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 82/175 (46%), Gaps = 11/175 (6%)
Query: 14 ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRIL---FDEDGN--PRLSTFG 67
+ HP+KW+++LR++L +A +EY ++ + H DL + I DE+ +++ FG
Sbjct: 115 KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG 174
Query: 68 LMKNSRDGKS-YSTNLAFTPPEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALD 124
L + S S N + PE + T ++ YSF +L +L+G+ P
Sbjct: 175 LSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEG--PFDEYS 232
Query: 125 LIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
+ + + M+ + L +D L + C +P++RP+ +V LS L
Sbjct: 233 YGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 13/154 (8%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 81
L +A+ +EY + + ++ DL A + DE +++ FGL ++ D + YS
Sbjct: 131 LQVARGMEYLAEQ-KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHAR 189
Query: 82 --LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 139
+ +T E L+T R T +S ++SFG LL +LL+ + PP +D +
Sbjct: 190 LPVKWTALESLQTYRFTTKSDVWSFGVLLWELLT-RGAPPYRHIDPFDLTHFLAQGRRLP 248
Query: 140 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 173
+ ++ D L ++ +C + +P RP + LV
Sbjct: 249 QPEYCPD---SLYQVMQQCWEADPAVRPTFRVLV 279
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 21/192 (10%)
Query: 5 TLAKHLFHWETHPMKWAMR--LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPR 62
+L HL ET K+ M+ + + A+ ++Y +K ++ DL + I ED +
Sbjct: 105 SLYHHLHASET---KFEMKKLIDIARQTARGMDYLHAKS-IIHRDLKSNNIFLHEDNTVK 160
Query: 63 LSTFGL-MKNSRDGKSY-----STNLAFTPPEYLRTGRVTP---ESVIYSFGTLLLDLLS 113
+ FGL + SR S+ S ++ + PE +R P +S +Y+FG +L +L++
Sbjct: 161 IGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT 220
Query: 114 GKHIPPSHALDLIRDRNLQMLTDSCLE---GQFTDDDGTELVRLASRCLQYEPRERPNPK 170
G+ +P S+ + RD+ ++M+ L + + + RL + CL+ + ERP+
Sbjct: 221 GQ-LPYSNINN--RDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFP 277
Query: 171 SLVTALSPLQKE 182
++ + L +E
Sbjct: 278 RILAEIEELARE 289
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 81/175 (46%), Gaps = 11/175 (6%)
Query: 14 ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRIL---FDEDGN--PRLSTFG 67
+ HP+KW+++LR++L +A +EY ++ + H DL + I DE+ +++ FG
Sbjct: 115 KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG 174
Query: 68 LMKNSRDGKS-YSTNLAFTPPEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALD 124
+ S S N + PE + T ++ YSF +L +L+G+ P
Sbjct: 175 TSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEG--PFDEYS 232
Query: 125 LIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
+ + + M+ + L +D L + C +P++RP+ +V LS L
Sbjct: 233 YGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 21/192 (10%)
Query: 5 TLAKHLFHWETHPMKWAMR--LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPR 62
+L HL ET K+ M+ + + A+ ++Y +K ++ DL + I ED +
Sbjct: 105 SLYHHLHASET---KFEMKKLIDIARQTARGMDYLHAKS-IIHRDLKSNNIFLHEDNTVK 160
Query: 63 LSTFGL-MKNSRDGKSY-----STNLAFTPPEYLRTGRVTP---ESVIYSFGTLLLDLLS 113
+ FGL + SR S+ S ++ + PE +R P +S +Y+FG +L +L++
Sbjct: 161 IGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT 220
Query: 114 GKHIPPSHALDLIRDRNLQMLTDSCLE---GQFTDDDGTELVRLASRCLQYEPRERPNPK 170
G+ +P S+ + RD+ ++M+ L + + + RL + CL+ + ERP+
Sbjct: 221 GQ-LPYSNINN--RDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFP 277
Query: 171 SLVTALSPLQKE 182
++ + L +E
Sbjct: 278 RILAEIEELARE 289
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 5 TLAKHLFHWETHPMKWAMR--LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPR 62
+L HL ET K+ M+ + + A+ ++Y +K ++ DL + I ED +
Sbjct: 93 SLYHHLHASET---KFEMKKLIDIARQTARGMDYLHAKS-IIHRDLKSNNIFLHEDNTVK 148
Query: 63 LSTFGL------MKNSRDGKSYSTNLAFTPPEYLRTGRVTP---ESVIYSFGTLLLDLLS 113
+ FGL S + S ++ + PE +R P +S +Y+FG +L +L++
Sbjct: 149 IGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT 208
Query: 114 GKHIPPSHALDLIRDRNLQMLTDSCLE---GQFTDDDGTELVRLASRCLQYEPRERPNPK 170
G+ +P S+ + RD+ ++M+ L + + + RL + CL+ + ERP+
Sbjct: 209 GQ-LPYSNINN--RDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFP 265
Query: 171 SLVTALSPLQKE 182
++ + L +E
Sbjct: 266 RILAEIEELARE 277
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 81/175 (46%), Gaps = 11/175 (6%)
Query: 14 ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRIL---FDEDGN--PRLSTFG 67
+ HP+KW+++LR++L +A +EY ++ + H DL + I DE+ +++ F
Sbjct: 115 KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFS 174
Query: 68 LMKNSRDGKS-YSTNLAFTPPEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALD 124
L + S S N + PE + T ++ YSF +L +L+G+ P
Sbjct: 175 LSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEG--PFDEYS 232
Query: 125 LIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
+ + + M+ + L +D L + C +P++RP+ +V LS L
Sbjct: 233 YGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYSTNLAFT 85
LA AL++ S G +Y DL IL DE+G+ +L+ FGL K S D + S+ + +
Sbjct: 136 LALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYM 194
Query: 86 PPEYLRTGRVTPESVIYSFGTLLLDLLSG 114
PE + T + +SFG L+ ++L+G
Sbjct: 195 APEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYSTNLAFT 85
LA AL++ S G +Y DL IL DE+G+ +L+ FGL K S D + S+ + +
Sbjct: 135 LALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYM 193
Query: 86 PPEYLRTGRVTPESVIYSFGTLLLDLLSG 114
PE + T + +SFG L+ ++L+G
Sbjct: 194 APEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYSTNLAFT 85
LA AL++ S G +Y DL IL DE+G+ +L+ FGL K S D + S+ + +
Sbjct: 135 LALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYM 193
Query: 86 PPEYLRTGRVTPESVIYSFGTLLLDLLSG 114
PE + T + +SFG L+ ++L+G
Sbjct: 194 APEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 24 LRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST-N 81
L+ L + +A+EY +G H DL A +L ED ++S FGL K + +
Sbjct: 105 LKFSLDVCEAMEYL--EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP 162
Query: 82 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 118
+ +T PE LR + + +S ++SFG LL ++ S +P
Sbjct: 163 VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 199
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 24 LRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST-N 81
L+ L + +A+EY +G H DL A +L ED ++S FGL K + +
Sbjct: 292 LKFSLDVCEAMEYL--EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP 349
Query: 82 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 118
+ +T PE LR + + +S ++SFG LL ++ S +P
Sbjct: 350 VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 386
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 24 LRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST-N 81
L+ L + +A+EY +G H DL A +L ED ++S FGL K + +
Sbjct: 120 LKFSLDVCEAMEYL--EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP 177
Query: 82 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 118
+ +T PE LR + + +S ++SFG LL ++ S +P
Sbjct: 178 VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 214
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 18/167 (10%)
Query: 21 AMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL---------MKN 71
A LR VL + LEY G+ ++ D+ A IL EDG+ +++ FG+ +
Sbjct: 124 ATILREVL---EGLEYLHKNGQ-IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITR 179
Query: 72 SRDGKSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGK----HIPPSHALDLI 126
++ K++ + PE + R ++ I+SFG ++L +G PP L L
Sbjct: 180 NKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLT 239
Query: 127 RDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 173
+ L + + G ++ S CLQ +P +RP L+
Sbjct: 240 LQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 286
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 18/167 (10%)
Query: 21 AMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL---------MKN 71
A LR VL + LEY G+ ++ D+ A IL EDG+ +++ FG+ +
Sbjct: 119 ATILREVL---EGLEYLHKNGQ-IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITR 174
Query: 72 SRDGKSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGK----HIPPSHALDLI 126
++ K++ + PE + R ++ I+SFG ++L +G PP L L
Sbjct: 175 NKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLT 234
Query: 127 RDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 173
+ L + + G ++ S CLQ +P +RP L+
Sbjct: 235 LQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 281
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 68/146 (46%), Gaps = 15/146 (10%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYSTNLAF 84
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + + S L +
Sbjct: 115 ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDY 173
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
PPE + GR+ E V ++S G L + L GK PP A Q +F
Sbjct: 174 LPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRVEF 224
Query: 144 TDDDG-TELVR-LASRCLQYEPRERP 167
T D TE R L SR L++ P +RP
Sbjct: 225 TFPDFVTEGARDLISRLLKHNPSQRP 250
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 24 LRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST-N 81
L+ L + +A+EY +G H DL A +L ED ++S FGL K + +
Sbjct: 111 LKFSLDVCEAMEYL--EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP 168
Query: 82 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 118
+ +T PE LR + +S ++SFG LL ++ S +P
Sbjct: 169 VKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVP 205
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 79/168 (47%), Gaps = 24/168 (14%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKSYSTN 81
+A+ + + + ++ DL A IL +++ FGL + +R+G +
Sbjct: 292 QIAEGMAFIEQRN-YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFP-- 348
Query: 82 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHA-LDLIR--DRNLQM-LTD 136
+ +T PE + G T +S ++SFG LL+++++ IP P + ++IR +R +M +
Sbjct: 349 IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPE 408
Query: 137 SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
+C E EL + RC + P ERP + + + L TE
Sbjct: 409 NCPE---------ELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATE 447
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 15/146 (10%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYSTNLAF 84
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + + L +
Sbjct: 116 ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDY 174
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
PPE + GR+ E V ++S G L + L GK PP A Q +F
Sbjct: 175 LPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRVEF 225
Query: 144 TDDDG-TELVR-LASRCLQYEPRERP 167
T D TE R L SR L++ P +RP
Sbjct: 226 TFPDFVTEGARDLISRLLKHNPSQRP 251
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 15/146 (10%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYSTNLAF 84
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + + L +
Sbjct: 117 ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDY 175
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
PPE + GR+ E V ++S G L + L GK PP A Q +F
Sbjct: 176 LPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRVEF 226
Query: 144 TDDDG-TELVR-LASRCLQYEPRERP 167
T D TE R L SR L++ P +RP
Sbjct: 227 TFPDFVTEGARDLISRLLKHNPSQRP 252
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 15/146 (10%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYSTNLAF 84
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + + L +
Sbjct: 119 ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDY 177
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
PPE + GR+ E V ++S G L + L GK PP A Q +F
Sbjct: 178 LPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRVEF 228
Query: 144 TDDDG-TELVR-LASRCLQYEPRERP 167
T D TE R L SR L++ P +RP
Sbjct: 229 TFPDFVTEGARDLISRLLKHNPSQRP 254
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 15/146 (10%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYSTNLAF 84
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + + L +
Sbjct: 119 ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDY 177
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
PPE + GR+ E V ++S G L + L GK PP A Q +F
Sbjct: 178 LPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRVEF 228
Query: 144 TDDDG-TELVR-LASRCLQYEPRERP 167
T D TE R L SR L++ P +RP
Sbjct: 229 TFPDFVTEGARDLISRLLKHNPSQRP 254
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 20/161 (12%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPE 88
+A+ + + + ++ DL A IL +++ FGL +R G + + +T PE
Sbjct: 286 QIAEGMAFIEQRN-YIHRDLRAANILVSASLVCKIADFGL---ARVGAKFP--IKWTAPE 339
Query: 89 YLRTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHA-LDLIR--DRNLQM-LTDSCLEGQF 143
+ G T +S ++SFG LL+++++ IP P + ++IR +R +M ++C E
Sbjct: 340 AINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPE--- 396
Query: 144 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
EL + RC + P ERP + + + L TE
Sbjct: 397 ------ELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATE 431
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 33 ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PE 88
L++ SKG +Y DL IL D+DG+ +++ FG+ K + G + + TP PE
Sbjct: 131 GLQFLHSKG-IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPE 189
Query: 89 YLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD 124
L + +SFG LL ++L G+ P H D
Sbjct: 190 ILLGQKYNHSVDWWSFGVLLYEMLIGQ--SPFHGQD 223
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 15/146 (10%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYSTNLAF 84
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + + L +
Sbjct: 131 ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDY 189
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
PPE + GR+ E V ++S G L + L GK PP A Q +F
Sbjct: 190 LPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRVEF 240
Query: 144 TDDDG-TELVR-LASRCLQYEPRERP 167
T D TE R L SR L++ P +RP
Sbjct: 241 TFPDFVTEGARDLISRLLKHNPSQRP 266
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 15/146 (10%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYSTNLAF 84
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + + L +
Sbjct: 117 ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDY 175
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
PPE + GR+ E V ++S G L + L GK PP A Q +F
Sbjct: 176 LPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRVEF 226
Query: 144 TDDDG-TELVR-LASRCLQYEPRERP 167
T D TE R L SR L++ P +RP
Sbjct: 227 TFPDFVTEGARDLISRLLKHNPSQRP 252
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 15/146 (10%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYSTNLAF 84
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + + L +
Sbjct: 140 ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDY 198
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
PPE + GR+ E V ++S G L + L GK PP A Q +F
Sbjct: 199 LPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRVEF 249
Query: 144 TDDDG-TELVR-LASRCLQYEPRERP 167
T D TE R L SR L++ P +RP
Sbjct: 250 TFPDFVTEGARDLISRLLKHNPSQRP 275
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 15/146 (10%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYSTNLAF 84
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + + L +
Sbjct: 117 ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDY 175
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
PPE + GR+ E V ++S G L + L GK PP A Q +F
Sbjct: 176 LPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRVEF 226
Query: 144 TDDDG-TELVR-LASRCLQYEPRERP 167
T D TE R L SR L++ P +RP
Sbjct: 227 TFPDFVTEGARDLISRLLKHNPSQRP 252
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 21/150 (14%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------L 82
++Q ++Y ++ + ++ DL A IL E ++S FGL ++ + SY +
Sbjct: 158 QISQGMQYL-AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPV 216
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNLQMLTDS 137
+ E L T +S ++SFG LL ++ L G IPP +L++ + D+
Sbjct: 217 KWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDN 276
Query: 138 CLEGQFTDDDGTELVRLASRCLQYEPRERP 167
C E E+ RL +C + EP +RP
Sbjct: 277 CSE---------EMYRLMLQCWKQEPDKRP 297
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 15/146 (10%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYSTNLAF 84
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + + L +
Sbjct: 115 ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDY 173
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
PPE + GR+ E V ++S G L + L GK PP A Q +F
Sbjct: 174 LPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRVEF 224
Query: 144 TDDDG-TELVR-LASRCLQYEPRERP 167
T D TE R L SR L++ P +RP
Sbjct: 225 TFPDFVTEGARDLISRLLKHNPSQRP 250
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 15/146 (10%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYSTNLAF 84
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + + L +
Sbjct: 117 ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDY 175
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
PPE + GR+ E V ++S G L + L GK PP A Q +F
Sbjct: 176 LPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRVEF 226
Query: 144 TDDDG-TELVR-LASRCLQYEPRERP 167
T D TE R L SR L++ P +RP
Sbjct: 227 TFPDFVTEGARDLISRLLKHNPSQRP 252
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 15/146 (10%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYSTNLAF 84
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + + L +
Sbjct: 114 ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDY 172
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
PPE + GR+ E V ++S G L + L GK PP A Q +F
Sbjct: 173 LPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRVEF 223
Query: 144 TDDDG-TELVR-LASRCLQYEPRERP 167
T D TE R L SR L++ P +RP
Sbjct: 224 TFPDFVTEGARDLISRLLKHNPSQRP 249
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 15/146 (10%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYSTNLAF 84
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + + L +
Sbjct: 113 ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDY 171
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
PPE + GR+ E V ++S G L + L GK PP A Q +F
Sbjct: 172 LPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRVEF 222
Query: 144 TDDDG-TELVR-LASRCLQYEPRERP 167
T D TE R L SR L++ P +RP
Sbjct: 223 TFPDFVTEGARDLISRLLKHNPSQRP 248
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 33 ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PE 88
L++ SKG +Y DL IL D+DG+ +++ FG+ K + G + + TP PE
Sbjct: 130 GLQFLHSKG-IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPE 188
Query: 89 YLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD 124
L + +SFG LL ++L G+ P H D
Sbjct: 189 ILLGQKYNHSVDWWSFGVLLYEMLIGQ--SPFHGQD 222
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 15/146 (10%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYSTNLAF 84
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + + L +
Sbjct: 114 ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDY 172
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
PPE + GR+ E V ++S G L + L GK PP A Q +F
Sbjct: 173 LPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRVEF 223
Query: 144 TDDDG-TELVR-LASRCLQYEPRERP 167
T D TE R L SR L++ P +RP
Sbjct: 224 TFPDFVTEGARDLISRLLKHNPSQRP 249
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 28/175 (16%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGK 76
L + +A+ + + + ++ DL A IL + + +++ FGL + +R+G
Sbjct: 118 LDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 176
Query: 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP------PSHALDLIRDRN 130
+ + +T PE + G T +S ++SFG LL ++++ IP P +L +R
Sbjct: 177 KFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--ERG 232
Query: 131 LQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
+M+ D+C E EL +L C + P +RP L + L TE
Sbjct: 233 YRMVRPDNCPE---------ELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 278
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 28/175 (16%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGK 76
L + +A+ + + + ++ DL A IL + + +++ FGL + +R+G
Sbjct: 117 LDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 175
Query: 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP------PSHALDLIRDRN 130
+ + +T PE + G T +S ++SFG LL ++++ IP P +L +R
Sbjct: 176 KFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--ERG 231
Query: 131 LQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
+M+ D+C E EL +L C + P +RP L + L TE
Sbjct: 232 YRMVRPDNCPE---------ELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 277
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 28/175 (16%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGK 76
L + +A+ + + + ++ DL A IL + + +++ FGL + +R+G
Sbjct: 112 LDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGA 170
Query: 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP------PSHALDLIRDRN 130
+ + +T PE + G T +S ++SFG LL ++++ IP P +L +R
Sbjct: 171 KFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--ERG 226
Query: 131 LQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
+M+ D+C E EL +L C + P +RP L + L TE
Sbjct: 227 YRMVRPDNCPE---------ELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 272
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 15/146 (10%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYSTNLAF 84
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + + L +
Sbjct: 118 ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDY 176
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
PPE + GR+ E V ++S G L + L GK PP A Q +F
Sbjct: 177 LPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRVEF 227
Query: 144 TDDDG-TELVR-LASRCLQYEPRERP 167
T D TE R L SR L++ P +RP
Sbjct: 228 TFPDFVTEGARDLISRLLKHNPSQRP 253
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 28/175 (16%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGK 76
L + +A+ + + + ++ DL A IL + + +++ FGL + +R+G
Sbjct: 122 LDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 180
Query: 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP------PSHALDLIRDRN 130
+ + +T PE + G T +S ++SFG LL ++++ IP P +L +R
Sbjct: 181 KFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--ERG 236
Query: 131 LQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
+M+ D+C E EL +L C + P +RP L + L TE
Sbjct: 237 YRMVRPDNCPE---------ELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 282
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 28/175 (16%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGK 76
L + +A+ + + + ++ DL A IL + + +++ FGL + +R+G
Sbjct: 120 LDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 178
Query: 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP------PSHALDLIRDRN 130
+ + +T PE + G T +S ++SFG LL ++++ IP P +L +R
Sbjct: 179 KFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--ERG 234
Query: 131 LQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
+M+ D+C E EL +L C + P +RP L + L TE
Sbjct: 235 YRMVRPDNCPE---------ELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 280
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 78/164 (47%), Gaps = 24/164 (14%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKSYSTN 81
+A+ + + + ++ DL A IL +++ FGL + +R+G +
Sbjct: 119 QIAEGMAFIEQRNY-IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFP-- 175
Query: 82 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHA-LDLIR--DRNLQM-LTD 136
+ +T PE + G T +S ++SFG LL+++++ IP P + ++IR +R +M +
Sbjct: 176 IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPE 235
Query: 137 SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180
+C E EL + RC + P ERP + + + L +
Sbjct: 236 NCPE---------ELYNIMMRCWKNRPEERPTFEYIQSVLDDFE 270
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 28/175 (16%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGK 76
L + +A+ + + + ++ DL A IL + + +++ FGL + +R+G
Sbjct: 112 LDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 170
Query: 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP------PSHALDLIRDRN 130
+ + +T PE + G T +S ++SFG LL ++++ IP P +L +R
Sbjct: 171 KFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--ERG 226
Query: 131 LQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
+M+ D+C E EL +L C + P +RP L + L TE
Sbjct: 227 YRMVRPDNCPE---------ELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 272
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 28/175 (16%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGK 76
L + +A+ + + + ++ DL A IL + + +++ FGL + +R+G
Sbjct: 121 LDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 179
Query: 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP------PSHALDLIRDRN 130
+ + +T PE + G T +S ++SFG LL ++++ IP P +L +R
Sbjct: 180 KFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--ERG 235
Query: 131 LQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
+M+ D+C E EL +L C + P +RP L + L TE
Sbjct: 236 YRMVRPDNCPE---------ELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 281
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 15/146 (10%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYSTNLAF 84
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + + L +
Sbjct: 111 ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDY 169
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
PPE + GR+ E V ++S G L + L GK PP A Q +F
Sbjct: 170 LPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRVEF 220
Query: 144 TDDDG-TELVR-LASRCLQYEPRERP 167
T D TE R L SR L++ P +RP
Sbjct: 221 TFPDFVTEGARDLISRLLKHNPSQRP 246
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 66/146 (45%), Gaps = 15/146 (10%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYSTNLAF 84
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + L +
Sbjct: 119 ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDY 177
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
PPE + GR+ E V ++S G L + L GK PP A Q +F
Sbjct: 178 LPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRVEF 228
Query: 144 TDDDG-TELVR-LASRCLQYEPRERP 167
T D TE R L SR L++ P +RP
Sbjct: 229 TFPDFVTEGARDLISRLLKHNPSQRP 254
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 66/146 (45%), Gaps = 15/146 (10%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST--NLAF 84
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + L +
Sbjct: 117 ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDY 175
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
PPE + GR+ E V ++S G L + L GK PP A Q +F
Sbjct: 176 LPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRVEF 226
Query: 144 TDDDG-TELVR-LASRCLQYEPRERP 167
T D TE R L SR L++ P +RP
Sbjct: 227 TFPDFVTEGARDLISRLLKHNPSQRP 252
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 66/146 (45%), Gaps = 15/146 (10%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYSTNLAF 84
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + L +
Sbjct: 114 ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDY 172
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
PPE + GR+ E V ++S G L + L GK PP A Q +F
Sbjct: 173 LPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRVEF 223
Query: 144 TDDDG-TELVR-LASRCLQYEPRERP 167
T D TE R L SR L++ P +RP
Sbjct: 224 TFPDFVTEGARDLISRLLKHNPSQRP 249
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 66/146 (45%), Gaps = 15/146 (10%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYSTNLAF 84
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + L +
Sbjct: 114 ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTLDY 172
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
PPE + GR+ E V ++S G L + L GK PP A Q +F
Sbjct: 173 LPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRVEF 223
Query: 144 TDDDG-TELVR-LASRCLQYEPRERP 167
T D TE R L SR L++ P +RP
Sbjct: 224 TFPDFVTEGARDLISRLLKHNPSQRP 249
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 66/146 (45%), Gaps = 15/146 (10%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS--TNLAF 84
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + L +
Sbjct: 116 ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDY 174
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
PPE + GR+ E V ++S G L + L GK PP A Q +F
Sbjct: 175 LPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRVEF 225
Query: 144 TDDDG-TELVR-LASRCLQYEPRERP 167
T D TE R L SR L++ P +RP
Sbjct: 226 TFPDFVTEGARDLISRLLKHNPSQRP 251
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 66/146 (45%), Gaps = 15/146 (10%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYSTNLAF 84
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + + L +
Sbjct: 119 ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDY 177
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
PPE + GR E V ++S G L + L GK PP A Q +F
Sbjct: 178 LPPEXIE-GRXHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRVEF 228
Query: 144 TDDDG-TELVR-LASRCLQYEPRERP 167
T D TE R L SR L++ P +RP
Sbjct: 229 TFPDFVTEGARDLISRLLKHNPSQRP 254
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 66/146 (45%), Gaps = 15/146 (10%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYSTNLAF 84
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + L +
Sbjct: 115 ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDY 173
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
PPE + GR+ E V ++S G L + L GK PP A Q +F
Sbjct: 174 LPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRVEF 224
Query: 144 TDDDG-TELVR-LASRCLQYEPRERP 167
T D TE R L SR L++ P +RP
Sbjct: 225 TFPDFVTEGARDLISRLLKHNPSQRP 250
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 66/146 (45%), Gaps = 15/146 (10%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYSTNLAF 84
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + L +
Sbjct: 119 ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDY 177
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
PPE + GR+ E V ++S G L + L GK PP A Q +F
Sbjct: 178 LPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRVEF 228
Query: 144 TDDDG-TELVR-LASRCLQYEPRERP 167
T D TE R L SR L++ P +RP
Sbjct: 229 TFPDFVTEGARDLISRLLKHNPSQRP 254
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 66/146 (45%), Gaps = 15/146 (10%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYSTNLAF 84
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + L +
Sbjct: 140 ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDY 198
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
PPE + GR+ E V ++S G L + L GK PP A Q +F
Sbjct: 199 LPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRVEF 249
Query: 144 TDDDG-TELVR-LASRCLQYEPRERP 167
T D TE R L SR L++ P +RP
Sbjct: 250 TFPDFVTEGARDLISRLLKHNPSQRP 275
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 66/146 (45%), Gaps = 15/146 (10%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS--TNLAF 84
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + L +
Sbjct: 114 ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDY 172
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
PPE + GR+ E V ++S G L + L GK PP A Q +F
Sbjct: 173 LPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRVEF 223
Query: 144 TDDDG-TELVR-LASRCLQYEPRERP 167
T D TE R L SR L++ P +RP
Sbjct: 224 TFPDFVTEGARDLISRLLKHNPSQRP 249
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 66/146 (45%), Gaps = 15/146 (10%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYSTNLAF 84
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + L +
Sbjct: 114 ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDY 172
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
PPE + GR+ E V ++S G L + L GK PP A Q +F
Sbjct: 173 LPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRVEF 223
Query: 144 TDDDG-TELVR-LASRCLQYEPRERP 167
T D TE R L SR L++ P +RP
Sbjct: 224 TFPDFVTEGARDLISRLLKHNPSQRP 249
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 66/146 (45%), Gaps = 15/146 (10%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYSTNLAF 84
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + L +
Sbjct: 114 ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDY 172
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
PPE + GR+ E V ++S G L + L GK PP A Q +F
Sbjct: 173 LPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRVEF 223
Query: 144 TDDDG-TELVR-LASRCLQYEPRERP 167
T D TE R L SR L++ P +RP
Sbjct: 224 TFPDFVTEGARDLISRLLKHNPSQRP 249
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 66/146 (45%), Gaps = 15/146 (10%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYSTNLAF 84
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + L +
Sbjct: 117 ITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDY 175
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
PPE + GR+ E V ++S G L + L GK PP A Q +F
Sbjct: 176 LPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRVEF 226
Query: 144 TDDDG-TELVR-LASRCLQYEPRERP 167
T D TE R L SR L++ P +RP
Sbjct: 227 TFPDFVTEGARDLISRLLKHNPSQRP 252
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 77/160 (48%), Gaps = 13/160 (8%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 81
L +A+ ++Y SK + ++ DL A + DE +++ FGL ++ D + YS +
Sbjct: 140 LQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 198
Query: 82 --LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 139
+ + E L+T + T +S ++SFG LL +L++ + PP ++ + L
Sbjct: 199 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLL 257
Query: 140 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
+ ++ D L + +C + RP+ LV+ +S +
Sbjct: 258 QPEYCPD---PLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-----LAF 84
+ +A+EY SK + L+ DL A L ++ G ++S FGL + D + S+ + +
Sbjct: 114 VCEAMEYLESK-QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRW 172
Query: 85 TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 118
+PPE L + + +S I++FG L+ ++ S +P
Sbjct: 173 SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 206
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 77/160 (48%), Gaps = 13/160 (8%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 81
L +A+ ++Y SK + ++ DL A + DE +++ FGL ++ D + YS +
Sbjct: 135 LQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 193
Query: 82 --LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 139
+ + E L+T + T +S ++SFG LL +L++ + PP ++ + L
Sbjct: 194 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLL 252
Query: 140 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
+ ++ D L + +C + RP+ LV+ +S +
Sbjct: 253 QPEYCPD---PLYEVMLKCWHPKAEMRPSFSELVSRISAI 289
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 77/160 (48%), Gaps = 13/160 (8%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 81
L +A+ ++Y SK + ++ DL A + DE +++ FGL ++ D + YS +
Sbjct: 139 LQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 197
Query: 82 --LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 139
+ + E L+T + T +S ++SFG LL +L++ + PP ++ + L
Sbjct: 198 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLL 256
Query: 140 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
+ ++ D L + +C + RP+ LV+ +S +
Sbjct: 257 QPEYCPD---PLYEVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 24/167 (14%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN------SRDGKSYSTNL 82
+A + Y + + ++ DL A + ED ++ FG+ ++ R G +
Sbjct: 140 EIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 198
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDS 137
+ PE L+ G T S ++SFG +L ++ + P L + + L D+
Sbjct: 199 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 258
Query: 138 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
C + F EL+R+ C QY P+ RP S + +S +++E E
Sbjct: 259 CPDMLF------ELMRM---CWQYNPKMRP---SFLEIISSIKEEME 293
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 77/160 (48%), Gaps = 13/160 (8%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 81
L +A+ ++Y SK + ++ DL A + DE +++ FGL ++ D + YS +
Sbjct: 140 LQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 198
Query: 82 --LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 139
+ + E L+T + T +S ++SFG LL +L++ + PP ++ + L
Sbjct: 199 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLL 257
Query: 140 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
+ ++ D L + +C + RP+ LV+ +S +
Sbjct: 258 QPEYCPD---PLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 77/160 (48%), Gaps = 13/160 (8%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 81
L +A+ ++Y SK + ++ DL A + DE +++ FGL ++ D + YS +
Sbjct: 138 LQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 196
Query: 82 --LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 139
+ + E L+T + T +S ++SFG LL +L++ + PP ++ + L
Sbjct: 197 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLL 255
Query: 140 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
+ ++ D L + +C + RP+ LV+ +S +
Sbjct: 256 QPEYCPD---PLYEVMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 16/155 (10%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT 85
++ + + L+Y S+ R ++ D+ A +L E G+ +L+ FG+ D + T
Sbjct: 121 ILREILKGLDYLHSE-RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGT 179
Query: 86 P----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS---C 138
P PE ++ ++ I+S G ++L G+ PP+ DL R L ++ +
Sbjct: 180 PFWMAPEVIKQSAYDFKADIWSLGITAIELAKGE--PPNS--DLHPMRVLFLIPKNSPPT 235
Query: 139 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 173
LEGQ + CL +PR RP K L+
Sbjct: 236 LEGQHS----KPFKEFVEACLNKDPRFRPTAKELL 266
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 77/160 (48%), Gaps = 13/160 (8%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 81
L +A+ ++Y SK + ++ DL A + DE +++ FGL ++ D + YS +
Sbjct: 137 LQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 195
Query: 82 --LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 139
+ + E L+T + T +S ++SFG LL +L++ + PP ++ + L
Sbjct: 196 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLL 254
Query: 140 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
+ ++ D L + +C + RP+ LV+ +S +
Sbjct: 255 QPEYCPD---PLYEVMLKCWHPKAEMRPSFSELVSRISAI 291
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 77/167 (46%), Gaps = 28/167 (16%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGK 76
L + +A+ + + + ++ DL A IL + + +++ FGL + +R+G
Sbjct: 118 LDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 176
Query: 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP------PSHALDLIRDRN 130
+ + +T PE + G T +S ++SFG LL ++++ IP P +L +R
Sbjct: 177 KFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--ERG 232
Query: 131 LQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 176
+M+ D+C E EL +L C + P +RP L + L
Sbjct: 233 YRMVRPDNCPE---------ELYQLMRLCWKERPEDRPTFDYLRSVL 270
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 77/160 (48%), Gaps = 13/160 (8%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 81
L +A+ ++Y SK + ++ DL A + DE +++ FGL ++ D + YS +
Sbjct: 159 LQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 217
Query: 82 --LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 139
+ + E L+T + T +S ++SFG LL +L++ + PP ++ + L
Sbjct: 218 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLL 276
Query: 140 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
+ ++ D L + +C + RP+ LV+ +S +
Sbjct: 277 QPEYCPD---PLYEVMLKCWHPKAEMRPSFSELVSRISAI 313
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 77/160 (48%), Gaps = 13/160 (8%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 81
L +A+ ++Y SK + ++ DL A + DE +++ FGL ++ D + YS +
Sbjct: 132 LQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 190
Query: 82 --LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 139
+ + E L+T + T +S ++SFG LL +L++ + PP ++ + L
Sbjct: 191 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLL 249
Query: 140 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
+ ++ D L + +C + RP+ LV+ +S +
Sbjct: 250 QPEYCPD---PLYEVMLKCWHPKAEMRPSFSELVSRISAI 286
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 77/167 (46%), Gaps = 28/167 (16%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGK 76
L + +A+ + + + ++ DL A IL + + +++ FGL + +R+G
Sbjct: 113 LDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 171
Query: 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP------PSHALDLIRDRN 130
+ + +T PE + G T +S ++SFG LL ++++ IP P +L +R
Sbjct: 172 KFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--ERG 227
Query: 131 LQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 176
+M+ D+C E EL +L C + P +RP L + L
Sbjct: 228 YRMVRPDNCPE---------ELYQLMRLCWKERPEDRPTFDYLRSVL 265
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 11/144 (7%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYSTNLAF 84
+ LA AL YC SK + ++ D+ +L G +++ FG ++ + + L +
Sbjct: 114 ITELANALSYCHSK-KVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDY 172
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
PPE + GR+ E V ++S G L + L GK PP A + +D ++ S +E F
Sbjct: 173 LPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA-NTYQDTYKRI---SRVEFTF 225
Query: 144 TDDDGTELVRLASRCLQYEPRERP 167
D L SR L++ P +RP
Sbjct: 226 PDFVTEGARDLISRLLKHNPSQRP 249
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 77/160 (48%), Gaps = 13/160 (8%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 81
L +A+ ++Y SK + ++ DL A + DE +++ FGL ++ D + YS +
Sbjct: 158 LQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 216
Query: 82 --LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 139
+ + E L+T + T +S ++SFG LL +L++ + PP ++ + L
Sbjct: 217 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLL 275
Query: 140 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
+ ++ D L + +C + RP+ LV+ +S +
Sbjct: 276 QPEYCPD---PLYEVMLKCWHPKAEMRPSFSELVSRISAI 312
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 77/167 (46%), Gaps = 28/167 (16%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGK 76
L + +A+ + + + ++ DL A IL + + +++ FGL + +R+G
Sbjct: 112 LDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 170
Query: 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP------PSHALDLIRDRN 130
+ + +T PE + G T +S ++SFG LL ++++ IP P +L +R
Sbjct: 171 KFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--ERG 226
Query: 131 LQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 176
+M+ D+C E EL +L C + P +RP L + L
Sbjct: 227 YRMVRPDNCPE---------ELYQLMRLCWKERPEDRPTFDYLRSVL 264
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 77/167 (46%), Gaps = 28/167 (16%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGK 76
L + +A+ + + + ++ DL A IL + + +++ FGL + +R+G
Sbjct: 114 LDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 172
Query: 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP------PSHALDLIRDRN 130
+ + +T PE + G T +S ++SFG LL ++++ IP P +L +R
Sbjct: 173 KFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--ERG 228
Query: 131 LQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 176
+M+ D+C E EL +L C + P +RP L + L
Sbjct: 229 YRMVRPDNCPE---------ELYQLMRLCWKERPEDRPTFDYLRSVL 266
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 77/167 (46%), Gaps = 28/167 (16%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGK 76
L + +A+ + + + ++ DL A IL + + +++ FGL + +R+G
Sbjct: 112 LDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 170
Query: 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP------PSHALDLIRDRN 130
+ + +T PE + G T +S ++SFG LL ++++ IP P +L +R
Sbjct: 171 KFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--ERG 226
Query: 131 LQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 176
+M+ D+C E EL +L C + P +RP L + L
Sbjct: 227 YRMVRPDNCPE---------ELYQLMRLCWKERPEDRPTFDYLRSVL 264
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 54/95 (56%), Gaps = 8/95 (8%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA------ 83
+ +A+EY SK + L+ DL A L ++ G ++S FGL + D + Y++++
Sbjct: 113 VCEAMEYLESK-QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVR 170
Query: 84 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 118
++PPE L + + +S I++FG L+ ++ S +P
Sbjct: 171 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 205
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 21/159 (13%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR--DGKSYSTN----L 82
+A+ +EY SK + ++ DL A +L ED +++ FGL ++ D +TN +
Sbjct: 158 QVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPV 216
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNLQMLTDS 137
+ PE L T +S ++SFG LL ++ L G +P L+++ + +
Sbjct: 217 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSN 276
Query: 138 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 176
C EL + C P +RP K LV L
Sbjct: 277 CT---------NELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-- 81
L + + +A+EY SK + L+ DL A L ++ G ++S FGL + D + S+
Sbjct: 123 LEMCKDVCEAMEYLESK-QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGS 181
Query: 82 ---LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 118
+ ++PPE L + + +S I++FG L+ ++ S +P
Sbjct: 182 KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 221
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 54/95 (56%), Gaps = 8/95 (8%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA------ 83
+ +A+EY SK + L+ DL A L ++ G ++S FGL + D + Y++++
Sbjct: 109 VCEAMEYLESK-QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVR 166
Query: 84 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 118
++PPE L + + +S I++FG L+ ++ S +P
Sbjct: 167 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 201
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 16/173 (9%)
Query: 23 RLRVVLHLAQALEYCTSKGRALYHDLNAYRILF--DED---GNP---RLSTFGLMKNSRD 74
+L V LA A+ + + ++ ++ A IL +ED GNP +LS G+
Sbjct: 115 KLEVAKQLAAAMHF-LEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLP 173
Query: 75 GKSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM 133
+ + PPE + + + + +SFGT L ++ SG P S ALD R LQ
Sbjct: 174 KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLS-ALD--SQRKLQF 230
Query: 134 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVP 186
D Q EL L + C+ YEP RP+ ++++ L+ L VP
Sbjct: 231 YED---RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVP 280
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 24/167 (14%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN------SRDGKSYSTNL 82
+A + Y + + ++ DL A + ED ++ FG+ ++ R G +
Sbjct: 139 EIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 197
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDS 137
+ PE L+ G T S ++SFG +L ++ + P L + + L D+
Sbjct: 198 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 257
Query: 138 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
C + F EL+R+ C QY P+ RP S + +S +++E E
Sbjct: 258 CPDMLF------ELMRM---CWQYNPKMRP---SFLEIISSIKEEME 292
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 77/167 (46%), Gaps = 28/167 (16%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGK 76
L + +A+ + + + ++ DL A IL + + +++ FGL + +R+G
Sbjct: 107 LDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 165
Query: 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP------PSHALDLIRDRN 130
+ + +T PE + G T +S ++SFG LL ++++ IP P +L +R
Sbjct: 166 KFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--ERG 221
Query: 131 LQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 176
+M+ D+C E EL +L C + P +RP L + L
Sbjct: 222 YRMVRPDNCPE---------ELYQLMRLCWKERPEDRPTFDYLRSVL 259
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 16/173 (9%)
Query: 23 RLRVVLHLAQALEYCTSKGRALYHDLNAYRILF--DED---GNP---RLSTFGLMKNSRD 74
+L V LA A+ + + ++ ++ A IL +ED GNP +LS G+
Sbjct: 115 KLEVAKQLAWAMHF-LEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLP 173
Query: 75 GKSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM 133
+ + PPE + + + + +SFGT L ++ SG P S ALD R LQ
Sbjct: 174 KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLS-ALD--SQRKLQF 230
Query: 134 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVP 186
D Q EL L + C+ YEP RP+ ++++ L+ L VP
Sbjct: 231 YED---RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVP 280
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 24/167 (14%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN------SRDGKSYSTNL 82
+A + Y + + ++ DL A + ED ++ FG+ ++ R G +
Sbjct: 137 EIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 195
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDS 137
+ PE L+ G T S ++SFG +L ++ + P L + + L D+
Sbjct: 196 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 255
Query: 138 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
C + F EL+R+ C QY P+ RP S + +S +++E E
Sbjct: 256 CPDMLF------ELMRM---CWQYNPKMRP---SFLEIISSIKEEME 290
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 54/95 (56%), Gaps = 8/95 (8%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA------ 83
+ +A+EY SK + L+ DL A L ++ G ++S FGL + D + Y++++
Sbjct: 114 VCEAMEYLESK-QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVR 171
Query: 84 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 118
++PPE L + + +S I++FG L+ ++ S +P
Sbjct: 172 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 206
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT 85
V L + QAL ++G ++ D+ + IL DG +LS FG L T
Sbjct: 132 VCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGT 190
Query: 86 P----PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRD 128
P PE + PE I+S G ++++++ G+ + PP A+ +IRD
Sbjct: 191 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD 241
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 24/167 (14%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN------SRDGKSYSTNL 82
+A + Y + + ++ DL A + ED ++ FG+ ++ R G +
Sbjct: 140 EIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 198
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDS 137
+ PE L+ G T S ++SFG +L ++ + P L + + L D+
Sbjct: 199 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 258
Query: 138 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
C + F EL+R+ C QY P+ RP S + +S +++E E
Sbjct: 259 CPDMLF------ELMRM---CWQYNPKMRP---SFLEIISSIKEEME 293
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT 85
V L + QAL ++G ++ D+ + IL DG +LS FG L T
Sbjct: 252 VCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGT 310
Query: 86 P----PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRD 128
P PE + PE I+S G ++++++ G+ + PP A+ +IRD
Sbjct: 311 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD 361
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 24/167 (14%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN------SRDGKSYSTNL 82
+A + Y + + ++ DL A + ED ++ FG+ ++ R G +
Sbjct: 136 EIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 194
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDS 137
+ PE L+ G T S ++SFG +L ++ + P L + + L D+
Sbjct: 195 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 254
Query: 138 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
C + F EL+R+ C QY P+ RP S + +S +++E E
Sbjct: 255 CPDMLF------ELMRM---CWQYNPKMRP---SFLEIISSIKEEME 289
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT 85
V L + QAL ++G ++ D+ + IL DG +LS FG L T
Sbjct: 130 VCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGT 188
Query: 86 P----PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRD 128
P PE + PE I+S G ++++++ G+ + PP A+ +IRD
Sbjct: 189 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD 239
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 54/95 (56%), Gaps = 8/95 (8%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA------ 83
+ +A+EY SK + L+ DL A L ++ G ++S FGL + D + Y++++
Sbjct: 120 VCEAMEYLESK-QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVR 177
Query: 84 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 118
++PPE L + + +S I++FG L+ ++ S +P
Sbjct: 178 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 212
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 24/167 (14%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN------SRDGKSYSTNL 82
+A + Y + + ++ DL A + ED ++ FG+ ++ R G +
Sbjct: 139 EIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 197
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDS 137
+ PE L+ G T S ++SFG +L ++ + P L + + L D+
Sbjct: 198 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 257
Query: 138 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
C + F EL+R+ C QY P+ RP S + +S +++E E
Sbjct: 258 CPDMLF------ELMRM---CWQYNPKMRP---SFLEIISSIKEEME 292
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 18/156 (11%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT 85
++ + + L+Y S+ + ++ D+ A +L E G +L+ FG+ D + T
Sbjct: 109 ILREILKGLDYLHSE-KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGT 167
Query: 86 P----PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRDRNLQMLTDS 137
P PE ++ ++ I+S G ++L G+ + P L LI N
Sbjct: 168 PFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN-----PP 222
Query: 138 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 173
LEG ++ L CL EP RP K L+
Sbjct: 223 TLEGNYSKP----LKEFVEACLNKEPSFRPTAKELL 254
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 68/168 (40%), Gaps = 18/168 (10%)
Query: 14 ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 73
E P+ ++ + + L+Y S+ + ++ D+ A +L E G +L+ FG+
Sbjct: 112 EPGPLDETQIATILREILKGLDYLHSE-KKIHRDIKAANVLLSEHGEVKLADFGVAGQLT 170
Query: 74 DGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHALDL 125
D + TP PE ++ ++ I+S G ++L G+ + P L L
Sbjct: 171 DTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFL 230
Query: 126 IRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 173
I N LEG ++ L CL EP RP K L+
Sbjct: 231 IPKNN-----PPTLEGNYS----KPLKEFVEACLNKEPSFRPTAKELL 269
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 8/101 (7%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA 83
L + + +A+EY SK + L+ DL A L ++ G ++S FGL + D + Y++++
Sbjct: 123 LEMCKDVCEAMEYLESK-QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVG 180
Query: 84 ------FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 118
++PPE L + + +S I++FG L+ ++ S +P
Sbjct: 181 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 221
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 68/168 (40%), Gaps = 18/168 (10%)
Query: 14 ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 73
E P+ ++ + + L+Y S+ + ++ D+ A +L E G +L+ FG+
Sbjct: 117 EPGPLDETQIATILREILKGLDYLHSE-KKIHRDIKAANVLLSEHGEVKLADFGVAGQLT 175
Query: 74 DGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHALDL 125
D + TP PE ++ ++ I+S G ++L G+ + P L L
Sbjct: 176 DTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFL 235
Query: 126 IRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 173
I N LEG ++ L CL EP RP K L+
Sbjct: 236 IPKNN-----PPTLEGNYSK----PLKEFVEACLNKEPSFRPTAKELL 274
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 24/167 (14%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN------SRDGKSYSTNL 82
+A + Y + + ++ DL A + ED ++ FG+ ++ R G +
Sbjct: 133 EIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 191
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDS 137
+ PE L+ G T S ++SFG +L ++ + P L + + L D+
Sbjct: 192 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 251
Query: 138 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
C + F EL+R+ C QY P+ RP S + +S +++E E
Sbjct: 252 CPDMLF------ELMRM---CWQYNPKMRP---SFLEIISSIKEEME 286
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT 85
V L + QAL ++G ++ D+ + IL DG +LS FG L T
Sbjct: 125 VCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGT 183
Query: 86 P----PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRD 128
P PE + PE I+S G ++++++ G+ + PP A+ +IRD
Sbjct: 184 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD 234
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT 85
V L + QAL ++G ++ D+ + IL DG +LS FG L T
Sbjct: 121 VCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGT 179
Query: 86 P----PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRD 128
P PE + PE I+S G ++++++ G+ + PP A+ +IRD
Sbjct: 180 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD 230
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 24/167 (14%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN------SRDGKSYSTNL 82
+A + Y + + ++ DL A + ED ++ FG+ ++ R G +
Sbjct: 146 EIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 204
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDS 137
+ PE L+ G T S ++SFG +L ++ + P L + + L D+
Sbjct: 205 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 264
Query: 138 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
C + F EL+R+ C QY P+ RP S + +S +++E E
Sbjct: 265 CPDMLF------ELMRM---CWQYNPKMRP---SFLEIISSIKEEME 299
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 21/159 (13%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STN----L 82
+A+ +EY SK + ++ DL A +L ED +++ FGL ++ Y +TN +
Sbjct: 158 QVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV 216
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNLQMLTDS 137
+ PE L T +S ++SFG LL ++ L G +P L+++ + +
Sbjct: 217 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSN 276
Query: 138 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 176
C EL + C P +RP K LV L
Sbjct: 277 CT---------NELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 18/156 (11%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT 85
++ + + L+Y S+ + ++ D+ A +L E G +L+ FG+ D + T
Sbjct: 109 ILREILKGLDYLHSE-KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGT 167
Query: 86 P----PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRDRNLQMLTDS 137
P PE ++ ++ I+S G ++L G+ + P L LI N
Sbjct: 168 PFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN-----PP 222
Query: 138 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 173
LEG ++ L CL EP RP K L+
Sbjct: 223 TLEGNYSKP----LKEFVEACLNKEPSFRPTAKELL 254
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 21/159 (13%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STN----L 82
+A+ +EY SK + ++ DL A +L ED +++ FGL ++ Y +TN +
Sbjct: 158 QVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV 216
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNLQMLTDS 137
+ PE L T +S ++SFG LL ++ L G +P L+++ + +
Sbjct: 217 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSN 276
Query: 138 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 176
C EL + C P +RP K LV L
Sbjct: 277 CT---------NELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT 85
V L + QAL ++G ++ D+ + IL DG +LS FG L T
Sbjct: 175 VCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGT 233
Query: 86 P----PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRD 128
P PE + PE I+S G ++++++ G+ + PP A+ +IRD
Sbjct: 234 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD 284
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 21/159 (13%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STN----L 82
+A+ +EY SK + ++ DL A +L ED +++ FGL ++ Y +TN +
Sbjct: 151 QVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV 209
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNLQMLTDS 137
+ PE L T +S ++SFG LL ++ L G +P L+++ + +
Sbjct: 210 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSN 269
Query: 138 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 176
C EL + C P +RP K LV L
Sbjct: 270 CT---------NELYMMMRDCWHAVPSQRPTFKQLVEDL 299
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 24/167 (14%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN------SRDGKSYSTNL 82
+A + Y + + ++ DL A + ED ++ FG+ ++ R G +
Sbjct: 146 EIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 204
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDS 137
+ PE L+ G T S ++SFG +L ++ + P L + + L D+
Sbjct: 205 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 264
Query: 138 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
C + F EL+R+ C QY P+ RP S + +S +++E E
Sbjct: 265 CPDMLF------ELMRM---CWQYNPKMRP---SFLEIISSIKEEME 299
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 21/159 (13%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STN----L 82
+A+ +EY SK + ++ DL A +L ED +++ FGL ++ Y +TN +
Sbjct: 150 QVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV 208
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNLQMLTDS 137
+ PE L T +S ++SFG LL ++ L G +P L+++ + +
Sbjct: 209 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSN 268
Query: 138 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 176
C EL + C P +RP K LV L
Sbjct: 269 CT---------NELYMMMRDCWHAVPSQRPTFKQLVEDL 298
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 21/159 (13%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STN----L 82
+A+ +EY SK + ++ DL A +L ED +++ FGL ++ Y +TN +
Sbjct: 147 QVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV 205
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNLQMLTDS 137
+ PE L T +S ++SFG LL ++ L G +P L+++ + +
Sbjct: 206 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSN 265
Query: 138 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 176
C EL + C P +RP K LV L
Sbjct: 266 CT---------NELYMMMRDCWHAVPSQRPTFKQLVEDL 295
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 21/177 (11%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STN----L 82
+A+ +EY SK + ++ DL A +L ED +++ FGL ++ Y +TN +
Sbjct: 158 QVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV 216
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNLQMLTDS 137
+ PE L T +S ++SFG LL ++ L G +P L+++ + +
Sbjct: 217 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSN 276
Query: 138 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIP 194
C EL + C P +RP K LV L + T ++ + +P
Sbjct: 277 CT---------NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEYLDLSMP 324
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 21/159 (13%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STN----L 82
+A+ +EY SK + ++ DL A +L ED +++ FGL ++ Y +TN +
Sbjct: 143 QVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV 201
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNLQMLTDS 137
+ PE L T +S ++SFG LL ++ L G +P L+++ + +
Sbjct: 202 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSN 261
Query: 138 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 176
C EL + C P +RP K LV L
Sbjct: 262 CT---------NELYMMMRDCWHAVPSQRPTFKQLVEDL 291
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 24/167 (14%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN------SRDGKSYSTNL 82
+A + Y + + ++ DL A + ED ++ FG+ ++ R G +
Sbjct: 168 EIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 226
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDS 137
+ PE L+ G T S ++SFG +L ++ + P L + + L D+
Sbjct: 227 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 286
Query: 138 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
C + F EL+R+ C QY P+ RP S + +S +++E E
Sbjct: 287 CPDMLF------ELMRM---CWQYNPKMRP---SFLEIISSIKEEME 321
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 24/167 (14%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN------SRDGKSYSTNL 82
+A + Y + + ++ DL A + ED ++ FG+ ++ R G +
Sbjct: 131 EIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 189
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDS 137
+ PE L+ G T S ++SFG +L ++ + P L + + L D+
Sbjct: 190 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 249
Query: 138 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
C D EL+R+ C QY P+ RP S + +S +++E E
Sbjct: 250 C------PDMLLELMRM---CWQYNPKMRP---SFLEIISSIKEEME 284
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 79/177 (44%), Gaps = 22/177 (12%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-- 81
L + ++ A+EY K ++ DL A L E+ +++ FGL + G +++ +
Sbjct: 112 LYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTFTAHAG 169
Query: 82 ----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQ 132
+ +T PE L + + +S +++FG LL ++ + P PS +L+
Sbjct: 170 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRM 229
Query: 133 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHV 189
+ C E + EL+R C Q+ P +RP+ + A + +E+ + V
Sbjct: 230 ERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 277
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 16/149 (10%)
Query: 31 AQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL------MKNSRDGKSYSTNLAF 84
AQ ++Y +K ++ DL + I ED ++ FGL S + S ++ +
Sbjct: 116 AQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 174
Query: 85 TPPEYLRTGRVTP---ESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE- 140
PE +R P +S +Y+FG +L +L++G+ +P S+ + RD+ + M+ L
Sbjct: 175 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-LPYSNINN--RDQIIFMVGRGYLSP 231
Query: 141 --GQFTDDDGTELVRLASRCLQYEPRERP 167
+ + + RL + CL+ + ERP
Sbjct: 232 DLSKVRSNCPKAMKRLMAECLKKKRDERP 260
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 16/149 (10%)
Query: 31 AQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL------MKNSRDGKSYSTNLAF 84
AQ ++Y +K ++ DL + I ED ++ FGL S + S ++ +
Sbjct: 114 AQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 172
Query: 85 TPPEYLRTGRVTP---ESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE- 140
PE +R P +S +Y+FG +L +L++G+ +P S+ + RD+ + M+ L
Sbjct: 173 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-LPYSNINN--RDQIIFMVGRGYLSP 229
Query: 141 --GQFTDDDGTELVRLASRCLQYEPRERP 167
+ + + RL + CL+ + ERP
Sbjct: 230 DLSKVRSNCPKAMKRLMAECLKKKRDERP 258
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 16/149 (10%)
Query: 31 AQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL------MKNSRDGKSYSTNLAF 84
AQ ++Y +K ++ DL + I ED ++ FGL S + S ++ +
Sbjct: 114 AQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 172
Query: 85 TPPEYLRTGRVTP---ESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE- 140
PE +R P +S +Y+FG +L +L++G+ +P S+ + RD+ + M+ L
Sbjct: 173 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-LPYSNINN--RDQIIFMVGRGYLSP 229
Query: 141 --GQFTDDDGTELVRLASRCLQYEPRERP 167
+ + + RL + CL+ + ERP
Sbjct: 230 DLSKVRSNCPKAMKRLMAECLKKKRDERP 258
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 18/159 (11%)
Query: 25 RVVL-HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY----- 78
RVV + A+ Y S+G A + DL +LFDE +L FGL + K Y
Sbjct: 111 RVVFRQIVSAVAYVHSQGYA-HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTC 169
Query: 79 STNLAFTPPEYLR-TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS 137
+LA+ PE ++ + E+ ++S G LL L+ G +P D N+ L
Sbjct: 170 CGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCG-FLP-------FDDDNVMALYKK 221
Query: 138 CLEGQFTDDD--GTELVRLASRCLQYEPRERPNPKSLVT 174
+ G++ + L + LQ +P++R + K+L+
Sbjct: 222 IMRGKYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLLN 260
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 16/149 (10%)
Query: 31 AQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL------MKNSRDGKSYSTNLAF 84
AQ ++Y +K ++ DL + I ED ++ FGL S + S ++ +
Sbjct: 114 AQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 172
Query: 85 TPPEYLRTGRVTP---ESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE- 140
PE +R P +S +Y+FG +L +L++G+ +P S+ + RD+ + M+ L
Sbjct: 173 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-LPYSNINN--RDQIIFMVGRGYLSP 229
Query: 141 --GQFTDDDGTELVRLASRCLQYEPRERP 167
+ + + RL + CL+ + ERP
Sbjct: 230 DLSKVRSNCPKAMKRLMAECLKKKRDERP 258
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 16/149 (10%)
Query: 31 AQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL------MKNSRDGKSYSTNLAF 84
AQ ++Y +K ++ DL + I ED ++ FGL S + S ++ +
Sbjct: 119 AQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 177
Query: 85 TPPEYLRTGRVTP---ESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE- 140
PE +R P +S +Y+FG +L +L++G+ +P S+ + RD+ + M+ L
Sbjct: 178 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-LPYSNINN--RDQIIFMVGRGYLSP 234
Query: 141 --GQFTDDDGTELVRLASRCLQYEPRERP 167
+ + + RL + CL+ + ERP
Sbjct: 235 DLSKVRSNCPKAMKRLMAECLKKKRDERP 263
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 78/184 (42%), Gaps = 18/184 (9%)
Query: 16 HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 75
H + A L + + + Y S+ ++ +L A +L D D ++ FGL K +G
Sbjct: 112 HSIGLAQLLLFAQQICEGMAYLHSQ-HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEG 170
Query: 76 KSY-------STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKHIPPSHALDL 125
Y + + + PE L+ + S ++SFG L +LL+ PP+ L+L
Sbjct: 171 HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLEL 230
Query: 126 IRDRNLQM----LTDSCLEGQFT---DDDGTELVRLASRCLQYEPRERPNPKSLVTALSP 178
I QM LT+ G+ D E+ L C + E RP ++L+ L
Sbjct: 231 IGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKT 290
Query: 179 LQKE 182
+ ++
Sbjct: 291 VHEK 294
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 21/159 (13%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STN----L 82
+A+ +EY SK + ++ DL A +L ED +++ FGL ++ Y +TN +
Sbjct: 199 QVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV 257
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNLQMLTDS 137
+ PE L T +S ++SFG LL ++ L G +P L+++ + +
Sbjct: 258 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSN 317
Query: 138 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 176
C EL + C P +RP K LV L
Sbjct: 318 CT---------NELYMMMRDCWHAVPSQRPTFKQLVEDL 347
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 16/149 (10%)
Query: 31 AQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL------MKNSRDGKSYSTNLAF 84
AQ ++Y +K ++ DL + I ED ++ FGL S + S ++ +
Sbjct: 119 AQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 177
Query: 85 TPPEYLRTGRVTP---ESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE- 140
PE +R P +S +Y+FG +L +L++G+ +P S+ + RD+ + M+ L
Sbjct: 178 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-LPYSNINN--RDQIIFMVGRGYLSP 234
Query: 141 --GQFTDDDGTELVRLASRCLQYEPRERP 167
+ + + RL + CL+ + ERP
Sbjct: 235 DLSKVRSNCPKAMKRLMAECLKKKRDERP 263
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 16/149 (10%)
Query: 31 AQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL-MKNSRDGKSY-----STNLAF 84
AQ ++Y +K ++ DL + I ED ++ FGL + SR S+ S ++ +
Sbjct: 134 AQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 192
Query: 85 TPPEYLRTGRVTP---ESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE- 140
PE +R P +S +Y+FG +L +L++G+ +P S+ + RD+ + M+ L
Sbjct: 193 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-LPYSNINN--RDQIIFMVGRGYLSP 249
Query: 141 --GQFTDDDGTELVRLASRCLQYEPRERP 167
+ + + RL + CL+ + ERP
Sbjct: 250 DLSKVRSNCPKAMKRLMAECLKKKRDERP 278
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------L 82
++Q ++Y ++ + ++ DL A IL E ++S FGL ++ + S +
Sbjct: 158 QISQGMQYL-AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPV 216
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNLQMLTDS 137
+ E L T +S ++SFG LL ++ L G IPP +L++ + D+
Sbjct: 217 KWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDN 276
Query: 138 CLEGQFTDDDGTELVRLASRCLQYEPRERP 167
C E E+ RL +C + EP +RP
Sbjct: 277 CSE---------EMYRLMLQCWKQEPDKRP 297
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 16/149 (10%)
Query: 31 AQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL------MKNSRDGKSYSTNLAF 84
AQ ++Y +K ++ DL + I ED ++ FGL S + S ++ +
Sbjct: 141 AQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 199
Query: 85 TPPEYLRTGRVTP---ESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE- 140
PE +R P +S +Y+FG +L +L++G+ +P S+ + RD+ + M+ L
Sbjct: 200 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-LPYSNINN--RDQIIFMVGRGYLSP 256
Query: 141 --GQFTDDDGTELVRLASRCLQYEPRERP 167
+ + + RL + CL+ + ERP
Sbjct: 257 DLSKVRSNCPKAMKRLMAECLKKKRDERP 285
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 16/149 (10%)
Query: 31 AQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL------MKNSRDGKSYSTNLAF 84
AQ ++Y +K ++ DL + I ED ++ FGL S + S ++ +
Sbjct: 142 AQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 200
Query: 85 TPPEYLRTGRVTP---ESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE- 140
PE +R P +S +Y+FG +L +L++G+ +P S+ + RD+ + M+ L
Sbjct: 201 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-LPYSNINN--RDQIIFMVGRGYLSP 257
Query: 141 --GQFTDDDGTELVRLASRCLQYEPRERP 167
+ + + RL + CL+ + ERP
Sbjct: 258 DLSKVRSNCPKAMKRLMAECLKKKRDERP 286
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 16/149 (10%)
Query: 31 AQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL-MKNSRDGKSY-----STNLAF 84
AQ ++Y +K ++ DL + I ED ++ FGL + SR S+ S ++ +
Sbjct: 142 AQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 200
Query: 85 TPPEYLRTGRVTP---ESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE- 140
PE +R P +S +Y+FG +L +L++G+ +P S+ + RD+ + M+ L
Sbjct: 201 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-LPYSNINN--RDQIIFMVGRGYLSP 257
Query: 141 --GQFTDDDGTELVRLASRCLQYEPRERP 167
+ + + RL + CL+ + ERP
Sbjct: 258 DLSKVRSNCPKAMKRLMAECLKKKRDERP 286
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 24/178 (13%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGK 76
L + ++ A+EY K ++ DL A L E+ +++ FGL + + G
Sbjct: 112 LYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA 170
Query: 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNL 131
+ + +T PE L + + +S +++FG LL ++ + P PS +L+
Sbjct: 171 KFP--IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYR 228
Query: 132 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHV 189
+ C E + EL+R C Q+ P +RP+ + A + +E+ + V
Sbjct: 229 MERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 277
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 77/167 (46%), Gaps = 28/167 (16%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGK 76
L + +A+ + + + ++ +L A IL + + +++ FGL + +R+G
Sbjct: 108 LDMAAQIAEGMAFIEERN-YIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 166
Query: 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP------PSHALDLIRDRN 130
+ + +T PE + G T +S ++SFG LL ++++ IP P +L +R
Sbjct: 167 KFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--ERG 222
Query: 131 LQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 176
+M+ D+C E EL +L C + P +RP L + L
Sbjct: 223 YRMVRPDNCPE---------ELYQLMRLCWKERPEDRPTFDYLRSVL 260
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYSTNLAFT 85
LA L++ S G +Y DL IL DE+G+ +L+ FGL K + D + S+ + +
Sbjct: 139 LALGLDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYM 197
Query: 86 PPEYLRTGRVTPESVIYSFGTLLLDLLSG 114
PE + + + +S+G L+ ++L+G
Sbjct: 198 APEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 21/164 (12%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN------SRDGKS 77
+++ +A + Y +K + ++ DL A + D ++ FG+ ++ R G
Sbjct: 130 IQMAAEIADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGK 188
Query: 78 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQ 132
+ + PE L+ G T S ++SFG +L ++ S P L + D
Sbjct: 189 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL 248
Query: 133 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 176
D+C E T+L+R+ C Q+ P+ RP +V L
Sbjct: 249 DQPDNCPERV------TDLMRM---CWQFNPKMRPTFLEIVNLL 283
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 13/119 (10%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP-- 86
+ A++YC K R ++ DL A +L D D N +++ FG G T P
Sbjct: 119 QIVSAVQYCHQK-RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYA 177
Query: 87 -PEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
PE + + PE ++S G +L L+SG S D +NL+ L + L G++
Sbjct: 178 APELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFD---GQNLKELRERVLRGKY 228
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 21/164 (12%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN------SRDGKS 77
+++ +A + Y +K + ++ DL A + D ++ FG+ ++ R G
Sbjct: 133 IQMAAEIADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGK 191
Query: 78 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQ 132
+ + PE L+ G T S ++SFG +L ++ S P L + D
Sbjct: 192 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL 251
Query: 133 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 176
D+C E T+L+R+ C Q+ P+ RP +V L
Sbjct: 252 DQPDNCPERV------TDLMRM---CWQFNPKMRPTFLEIVNLL 286
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 81
L +A+ ++Y SK + ++ DL A + DE +++ FGL ++ D + S +
Sbjct: 139 LQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAK 197
Query: 82 --LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 139
+ + E L+T + T +S ++SFG LL +L++ + PP ++ + L
Sbjct: 198 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLL 256
Query: 140 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
+ ++ D L + +C + RP+ LV+ +S +
Sbjct: 257 QPEYCPD---PLYEVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 66/154 (42%), Gaps = 25/154 (16%)
Query: 44 LYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVT 96
++ DL A IL E+ +++ FGL + +R G + + +T PE GR T
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFP--IKWTAPEAALYGRFT 190
Query: 97 PESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQM-LTDSCLEGQFTDDDGTE 150
+S ++SFG LL +L + +P LD + +R +M C E
Sbjct: 191 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPES--------- 240
Query: 151 LVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
L L +C + EP ERP + L L TE
Sbjct: 241 LHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 274
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 78/184 (42%), Gaps = 18/184 (9%)
Query: 16 HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 75
H + A L + + + Y ++ ++ +L A +L D D ++ FGL K +G
Sbjct: 112 HSIGLAQLLLFAQQICEGMAYLHAQ-HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEG 170
Query: 76 KSY-------STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKHIPPSHALDL 125
Y + + + PE L+ + S ++SFG L +LL+ PP+ L+L
Sbjct: 171 HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLEL 230
Query: 126 IRDRNLQM----LTDSCLEGQFT---DDDGTELVRLASRCLQYEPRERPNPKSLVTALSP 178
I QM LT+ G+ D E+ L C + E RP ++L+ L
Sbjct: 231 IGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKT 290
Query: 179 LQKE 182
+ ++
Sbjct: 291 VHEK 294
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 66/154 (42%), Gaps = 25/154 (16%)
Query: 44 LYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVT 96
++ DL A IL E+ +++ FGL + +R G + + +T PE GR T
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFT 359
Query: 97 PESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQM-LTDSCLEGQFTDDDGTE 150
+S ++SFG LL +L + +P LD + +R +M C E
Sbjct: 360 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPES--------- 409
Query: 151 LVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
L L +C + EP ERP + L L TE
Sbjct: 410 LHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 443
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 68/146 (46%), Gaps = 8/146 (5%)
Query: 32 QALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----P 87
QALE+ S + ++ D+ + IL DG+ +L+ FG +S + + TP P
Sbjct: 128 QALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAP 186
Query: 88 EYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 147
E + P+ I+S G + ++++ G+ PP + +R L + T+ E Q +
Sbjct: 187 EVVTRKAYGPKVDIWSLGIMAIEMIEGE--PPYLNENPLRALYL-IATNGTPELQNPEKL 243
Query: 148 GTELVRLASRCLQYEPRERPNPKSLV 173
+RCL+ + +R + K L+
Sbjct: 244 SAIFRDFLNRCLEMDVEKRGSAKELI 269
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 66/154 (42%), Gaps = 25/154 (16%)
Query: 44 LYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVT 96
++ DL A IL E+ +++ FGL + +R G + + +T PE GR T
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFT 359
Query: 97 PESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQM-LTDSCLEGQFTDDDGTE 150
+S ++SFG LL +L + +P LD + +R +M C E
Sbjct: 360 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPES--------- 409
Query: 151 LVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
L L +C + EP ERP + L L TE
Sbjct: 410 LHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 443
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 66/154 (42%), Gaps = 25/154 (16%)
Query: 44 LYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVT 96
++ DL A IL E+ +++ FGL + +R G + + +T PE GR T
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFT 190
Query: 97 PESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQM-LTDSCLEGQFTDDDGTE 150
+S ++SFG LL +L + +P LD + +R +M C E
Sbjct: 191 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPES--------- 240
Query: 151 LVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
L L +C + EP ERP + L L TE
Sbjct: 241 LHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 274
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 24/178 (13%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-- 81
L + ++ A+EY K ++ DL A L E+ +++ FGL + G +Y+ +
Sbjct: 119 LYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAG 176
Query: 82 ----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQ 132
+ +T PE L + + +S +++FG LL ++ + + P +DL + +++ +
Sbjct: 177 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDYR 235
Query: 133 M-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHV 189
M + C E + EL+R C Q+ P +RP+ + A + +E+ + V
Sbjct: 236 MERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 284
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 66/154 (42%), Gaps = 25/154 (16%)
Query: 44 LYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVT 96
++ DL A IL E+ +++ FGL + +R G + + +T PE GR T
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFT 359
Query: 97 PESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQM-LTDSCLEGQFTDDDGTE 150
+S ++SFG LL +L + +P LD + +R +M C E
Sbjct: 360 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPES--------- 409
Query: 151 LVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
L L +C + EP ERP + L L TE
Sbjct: 410 LHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 443
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 61/138 (44%), Gaps = 25/138 (18%)
Query: 44 LYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVT 96
++ DL A IL E+ +++ FGL + +R G + + +T PE GR T
Sbjct: 126 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFP--IKWTAPEAALYGRFT 183
Query: 97 PESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQM-LTDSCLEGQFTDDDGTE 150
+S ++SFG LL +L + +P LD + +R +M C E
Sbjct: 184 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPES--------- 233
Query: 151 LVRLASRCLQYEPRERPN 168
L L +C + EP ERP
Sbjct: 234 LHDLMCQCWRKEPEERPT 251
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 66/154 (42%), Gaps = 25/154 (16%)
Query: 44 LYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVT 96
++ DL A IL E+ +++ FGL + +R G + + +T PE GR T
Sbjct: 129 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFT 186
Query: 97 PESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQM-LTDSCLEGQFTDDDGTE 150
+S ++SFG LL +L + +P LD + +R +M C E
Sbjct: 187 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPES--------- 236
Query: 151 LVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
L L +C + EP ERP + L L TE
Sbjct: 237 LHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 270
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 24/178 (13%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-- 81
L + ++ A+EY K ++ DL A L E+ +++ FGL + G +Y+ +
Sbjct: 116 LYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAG 173
Query: 82 ----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQ 132
+ +T PE L + + +S +++FG LL ++ + + P +DL + +++ +
Sbjct: 174 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDYR 232
Query: 133 M-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHV 189
M + C E + EL+R C Q+ P +RP+ + A + +E+ + V
Sbjct: 233 MERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 281
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 21/150 (14%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------L 82
++Q ++Y ++ DL A IL E ++S FGL ++ + S +
Sbjct: 158 QISQGMQYLAEMS-LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPV 216
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNLQMLTDS 137
+ E L T +S ++SFG LL ++ L G IPP +L++ + D+
Sbjct: 217 KWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDN 276
Query: 138 CLEGQFTDDDGTELVRLASRCLQYEPRERP 167
C E E+ RL +C + EP +RP
Sbjct: 277 CSE---------EMYRLMLQCWKQEPDKRP 297
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 24/178 (13%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-- 81
L + ++ A+EY K ++ DL A L E+ +++ FGL + G +Y+ +
Sbjct: 119 LYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAG 176
Query: 82 ----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQ 132
+ +T PE L + + +S +++FG LL ++ + + P +DL + +++ +
Sbjct: 177 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDYR 235
Query: 133 M-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHV 189
M + C E + EL+R C Q+ P +RP+ + A + +E+ + V
Sbjct: 236 MERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 284
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 21/164 (12%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN------SRDGKS 77
+++ +A + Y +K + ++ DL A + D ++ FG+ ++ R G
Sbjct: 133 IQMAAEIADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGK 191
Query: 78 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQ 132
+ + PE L+ G T S ++SFG +L ++ S P L + D
Sbjct: 192 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL 251
Query: 133 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 176
D+C E T+L+R+ C Q+ P+ RP +V L
Sbjct: 252 DQPDNCPERV------TDLMRM---CWQFNPKMRPTFLEIVNLL 286
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 21/164 (12%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN------SRDGKS 77
+++ +A + Y +K + ++ DL A + D ++ FG+ ++ R G
Sbjct: 133 IQMAAEIADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGK 191
Query: 78 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQ 132
+ + PE L+ G T S ++SFG +L ++ S P L + D
Sbjct: 192 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL 251
Query: 133 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 176
D+C E T+L+R+ C Q+ P+ RP +V L
Sbjct: 252 DQPDNCPERV------TDLMRM---CWQFNPKMRPTFLEIVNLL 286
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 24/178 (13%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-- 81
L + ++ A+EY K ++ DL A L E+ +++ FGL + G +Y+ +
Sbjct: 114 LYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAG 171
Query: 82 ----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQ 132
+ +T PE L + + +S +++FG LL ++ + + P +DL + +++ +
Sbjct: 172 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDYR 230
Query: 133 M-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHV 189
M + C E + EL+R C Q+ P +RP+ + A + +E+ + V
Sbjct: 231 MERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 279
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 24/178 (13%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-- 81
L + ++ A+EY K ++ DL A L E+ +++ FGL + G +Y+ +
Sbjct: 116 LYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAG 173
Query: 82 ----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQ 132
+ +T PE L + + +S +++FG LL ++ + + P +DL + +++ +
Sbjct: 174 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDYR 232
Query: 133 M-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHV 189
M + C E + EL+R C Q+ P +RP+ + A + +E+ + V
Sbjct: 233 MERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 281
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 24/178 (13%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-- 81
L + ++ A+EY K ++ DL A L E+ +++ FGL + G +Y+ +
Sbjct: 127 LYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAG 184
Query: 82 ----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQ 132
+ +T PE L + + +S +++FG LL ++ + + P +DL + +++ +
Sbjct: 185 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDYR 243
Query: 133 M-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHV 189
M + C E + EL+R C Q+ P +RP+ + A + +E+ + V
Sbjct: 244 MERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 292
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 71/167 (42%), Gaps = 24/167 (14%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN------SRDGKSYSTNL 82
+A + Y + + ++ DL A ED ++ FG+ ++ R G +
Sbjct: 133 EIADGMAYLNAN-KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 191
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDS 137
+ PE L+ G T S ++SFG +L ++ + P L + + L D+
Sbjct: 192 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 251
Query: 138 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
C D EL+R+ C QY P+ RP S + +S +++E E
Sbjct: 252 C------PDMLLELMRM---CWQYNPKMRP---SFLEIISSIKEEME 286
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 24/178 (13%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-- 81
L + ++ A+EY K ++ DL A L E+ +++ FGL + G +Y+ +
Sbjct: 114 LYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAG 171
Query: 82 ----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQ 132
+ +T PE L + + +S +++FG LL ++ + + P +DL + +++ +
Sbjct: 172 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDYR 230
Query: 133 M-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHV 189
M + C E + EL+R C Q+ P +RP+ + A + +E+ + V
Sbjct: 231 MERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 279
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 24/178 (13%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-- 81
L + ++ A+EY K ++ DL A L E+ +++ FGL + G +Y+ +
Sbjct: 114 LYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAG 171
Query: 82 ----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQ 132
+ +T PE L + + +S +++FG LL ++ + + P +DL + +++ +
Sbjct: 172 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDYR 230
Query: 133 M-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHV 189
M + C E + EL+R C Q+ P +RP+ + A + +E+ + V
Sbjct: 231 MERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 279
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 76/175 (43%), Gaps = 19/175 (10%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY----- 78
L+ + + +EY +K R ++ DL IL + + ++ FGL K K +
Sbjct: 117 LQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKE 175
Query: 79 --STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKHIPPSHALDLI-RDRNLQ 132
+ + + PE L + + S ++SFG +L +L + PP+ + +I D+ Q
Sbjct: 176 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQ 235
Query: 133 MLTDSCLE-----GQFTDDDGT--ELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180
M+ +E G+ DG E+ + + C +RP+ + L + ++
Sbjct: 236 MIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 290
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 76/174 (43%), Gaps = 24/174 (13%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGK 76
L + ++ A+EY K ++ DL A L E+ +++ FGL + + G
Sbjct: 112 LYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA 170
Query: 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNL 131
+ + +T PE L + + +S +++FG LL ++ + P PS +L+
Sbjct: 171 KFP--IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYR 228
Query: 132 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 185
+ C E + EL+R C Q+ P +RP+ + A + +E+ +
Sbjct: 229 MERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSI 273
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 24/178 (13%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-- 81
L + ++ A+EY K ++ DL A L E+ +++ FGL + G +Y+ +
Sbjct: 114 LYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAG 171
Query: 82 ----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQ 132
+ +T PE L + + +S +++FG LL ++ + + P +DL + +++ +
Sbjct: 172 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDYR 230
Query: 133 M-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHV 189
M + C E + EL+R C Q+ P +RP+ + A + +E+ + V
Sbjct: 231 MERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 279
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 21/164 (12%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN------SRDGKS 77
+++ +A + Y +K + ++ DL A + D ++ FG+ ++ R G
Sbjct: 132 IQMAAEIADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGK 190
Query: 78 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQ 132
+ + PE L+ G T S ++SFG +L ++ S P L + D
Sbjct: 191 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL 250
Query: 133 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 176
D+C E T+L+R+ C Q+ P+ RP +V L
Sbjct: 251 DQPDNCPERV------TDLMRM---CWQFNPKMRPTFLEIVNLL 285
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 25/137 (18%)
Query: 44 LYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVT 96
++ DL A IL E+ +++ FGL + +R G + + +T PE GR T
Sbjct: 385 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFT 442
Query: 97 PESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQM-LTDSCLEGQFTDDDGTE 150
+S ++SFG LL +L + +P LD + +R +M C E
Sbjct: 443 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPE---------S 492
Query: 151 LVRLASRCLQYEPRERP 167
L L +C + EP ERP
Sbjct: 493 LHDLMCQCWRKEPEERP 509
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 70/166 (42%), Gaps = 26/166 (15%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 81
+A+ +E+ +S+ + ++ DL A IL E+ ++ FGL ++ Y
Sbjct: 206 FQVARGMEFLSSR-KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 82 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS--GKHIPPSHALDLIRDRNLQMLTDSC- 138
L + PE + + +S ++S+G LL ++ S G P +QM D C
Sbjct: 265 LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYP-----------GVQMDEDFCS 313
Query: 139 -----LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
+ + + E+ ++ C +P+ERP LV L L
Sbjct: 314 RLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKLGDL 359
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 62/152 (40%), Gaps = 18/152 (11%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP--- 86
+ + L+Y S+ + ++ D+ A +L E G+ +L+ FG+ D + TP
Sbjct: 129 ILKGLDYLHSE-KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWM 187
Query: 87 -PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRDRNLQMLTDSCLEG 141
PE ++ ++ I+S G ++L G+ + P L LI N L G
Sbjct: 188 APEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNN-----PPTLVG 242
Query: 142 QFTDDDGTELVRLASRCLQYEPRERPNPKSLV 173
FT CL +P RP K L+
Sbjct: 243 DFT----KSFKEFIDACLNKDPSFRPTAKELL 270
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 78/186 (41%), Gaps = 18/186 (9%)
Query: 16 HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 75
H + A L + + + Y ++ ++ DL A +L D D ++ FGL K +G
Sbjct: 129 HSIGLAQLLLFAQQICEGMAYLHAQ-HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187
Query: 76 KSY-------STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKHIPPSHALDL 125
+ + + PE L+ + S ++SFG L +LL+ PP+ L+L
Sbjct: 188 HEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLEL 247
Query: 126 IRDRNLQM----LTDSCLEGQFT---DDDGTELVRLASRCLQYEPRERPNPKSLVTALSP 178
I QM LT+ G+ D E+ L C + E RP ++L+ L
Sbjct: 248 IGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKT 307
Query: 179 LQKETE 184
+ ++ +
Sbjct: 308 VHEKYQ 313
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 68/164 (41%), Gaps = 21/164 (12%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN------SRDGKS 77
+++ +A + Y +K + ++ DL A + D ++ FG+ ++ R G
Sbjct: 133 IQMAAEIADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGK 191
Query: 78 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQ 132
+ + PE L+ G T S ++SFG +L ++ S P L + D
Sbjct: 192 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL 251
Query: 133 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 176
D+C E T+L+R+ C Q+ P RP +V L
Sbjct: 252 DQPDNCPERV------TDLMRM---CWQFNPNMRPTFLEIVNLL 286
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYSTNLAF 84
+ LA AL YC SK R ++ D+ +L +G +++ FG ++ + + L +
Sbjct: 118 ITELANALSYCHSK-RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTLDY 176
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHA 122
PPE + GR+ E V ++S G L + L G +PP A
Sbjct: 177 LPPEMIE-GRMHDEKVDLWSLGVLCYEFLVG--MPPFEA 212
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 76/175 (43%), Gaps = 19/175 (10%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY----- 78
L+ + + +EY +K R ++ +L IL + + ++ FGL K K Y
Sbjct: 118 LQYTSQICKGMEYLGTK-RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKE 176
Query: 79 --STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKHIPPSHALDLI-RDRNLQ 132
+ + + PE L + + S ++SFG +L +L + PP+ + +I D+ Q
Sbjct: 177 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQ 236
Query: 133 MLTDSCLE-----GQFTDDDGT--ELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180
M+ +E G+ DG E+ + + C +RP+ + L + ++
Sbjct: 237 MIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 291
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 13/119 (10%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFT 85
+ A++YC K R ++ DL A +L D D N +++ FG G ++ +
Sbjct: 122 QIVSAVQYCHQK-RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYA 180
Query: 86 PPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
PE + + PE ++S G +L L+SG S D +NL+ L + L G++
Sbjct: 181 APELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFD---GQNLKELRERVLRGKY 231
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYSTNLAF 84
+ LA AL YC SK R ++ D+ +L +G +++ FG ++ + + L +
Sbjct: 118 ITELANALSYCHSK-RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDY 176
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHA 122
PPE + GR+ E V ++S G L + L G +PP A
Sbjct: 177 LPPEMIE-GRMHDEKVDLWSLGVLCYEFLVG--MPPFEA 212
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 68/146 (46%), Gaps = 8/146 (5%)
Query: 32 QALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----P 87
QALE+ S + ++ D+ + IL DG+ +L+ FG +S + + TP P
Sbjct: 127 QALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAP 185
Query: 88 EYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 147
E + P+ I+S G + ++++ G+ PP + +R L + T+ E Q +
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGE--PPYLNENPLRALYL-IATNGTPELQNPEKL 242
Query: 148 GTELVRLASRCLQYEPRERPNPKSLV 173
+RCL+ + +R + K L+
Sbjct: 243 SAIFRDFLNRCLEMDVEKRGSAKELL 268
>pdb|1ELW|A Chain A, Crystal Structure Of The Tpr1 Domain Of Hop In Complex
With A Hsc70 Peptide
pdb|1ELW|B Chain B, Crystal Structure Of The Tpr1 Domain Of Hop In Complex
With A Hsc70 Peptide
Length = 118
Score = 41.6 bits (96), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 1/104 (0%)
Query: 245 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALN 304
M++ K+KG+ A ++ DA++CY++ I + +Y+ RS Y Q A
Sbjct: 1 MEQVNELKEKGNKALSVGNIDDALQCYSEAIKLDPH-NHVLYSNRSAAYAKKGDYQKAYE 59
Query: 305 DAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEA 348
D + + P W +AAAL + EA+ +EG EA
Sbjct: 60 DGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEA 103
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 75/175 (42%), Gaps = 17/175 (9%)
Query: 23 RLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN 81
RL + +A+ + Y ++ + H DL + +L D+ ++ FGL + S
Sbjct: 139 RLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKX 198
Query: 82 LAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRDRNLQM 133
A TP PE LR +S +YSFG +L +L + + ++ P+ + + +
Sbjct: 199 AAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFK---- 254
Query: 134 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSH 188
C + + ++ + C EP +RP+ +++ L PL K P +
Sbjct: 255 ----CKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPPN 305
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 12/159 (7%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 81
+A+ +E+ S+ + ++ DL A IL E ++ FGL ++ Y
Sbjct: 146 FQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 204
Query: 82 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLE 140
L + PE + T +S ++SFG LL ++ S G P +D R L+ T
Sbjct: 205 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT----R 260
Query: 141 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
+ D E+ + C EP +RP LV L L
Sbjct: 261 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 12/159 (7%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 81
+A+ +E+ S+ + ++ DL A IL E ++ FGL ++ Y
Sbjct: 146 FQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 204
Query: 82 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLE 140
L + PE + T +S ++SFG LL ++ S G P +D R L+ T
Sbjct: 205 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT----R 260
Query: 141 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
+ D E+ + C EP +RP LV L L
Sbjct: 261 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 10/97 (10%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKSYSTN 81
+A+ + Y K ++ DL A +L E +++ FGL + +R+G +
Sbjct: 117 QIAEGMAYIERKNY-IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFP-- 173
Query: 82 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 118
+ +T PE + G T +S ++SFG LL ++++ IP
Sbjct: 174 IKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIP 210
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 25/154 (16%)
Query: 44 LYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVT 96
++ DL A IL E+ +++ FGL + +R G + + +T PE GR T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFT 193
Query: 97 PESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQM-LTDSCLEGQFTDDDGTE 150
+S ++SFG LL +L + +P LD + +R +M C E
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPES--------- 243
Query: 151 LVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
L L +C + +P ERP + L L TE
Sbjct: 244 LHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 277
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 25/154 (16%)
Query: 44 LYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVT 96
++ DL A IL E+ +++ FGL + +R G + + +T PE GR T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFT 193
Query: 97 PESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQM-LTDSCLEGQFTDDDGTE 150
+S ++SFG LL +L + +P LD + +R +M C E
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPES--------- 243
Query: 151 LVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
L L +C + +P ERP + L L TE
Sbjct: 244 LHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 277
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 75/164 (45%), Gaps = 25/164 (15%)
Query: 27 VLH-LAQALEYCTSKGRALYHDLNAYRILF-DEDGNP---RLSTFGLMKNSRDGKS---- 77
VLH + + +EY S+G ++ DL IL+ DE GNP R+ FG K R
Sbjct: 126 VLHTIGKTVEYLHSQG-VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMT 184
Query: 78 --YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT 135
Y+ N F PE L+ I+S G LL +L+G + P ++ D ++LT
Sbjct: 185 PCYTAN--FVAPEVLKRQGYDEGCDIWSLGILLYTMLAG-YTPFANGPS---DTPEEILT 238
Query: 136 DSCLEGQFTDDDG-----TELVR-LASRCLQYEPRERPNPKSLV 173
G+FT G +E + L S+ L +P +R K ++
Sbjct: 239 -RIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVL 281
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 12/159 (7%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 81
+A+ +E+ S+ + ++ DL A IL E ++ FGL ++ Y
Sbjct: 157 FQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 215
Query: 82 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLE 140
L + PE + T +S ++SFG LL ++ S G P +D R L+ T
Sbjct: 216 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT----R 271
Query: 141 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
+ D E+ + C EP +RP LV L L
Sbjct: 272 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 310
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 25/154 (16%)
Query: 44 LYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVT 96
++ DL A IL E+ +++ FGL + +R G + + +T PE GR T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFT 193
Query: 97 PESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQM-LTDSCLEGQFTDDDGTE 150
+S ++SFG LL +L + +P LD + +R +M C E
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPES--------- 243
Query: 151 LVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
L L +C + +P ERP + L L TE
Sbjct: 244 LHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 277
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 25/154 (16%)
Query: 44 LYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVT 96
++ DL A IL E+ +++ FGL + +R G + + +T PE GR T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFT 193
Query: 97 PESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQM-LTDSCLEGQFTDDDGTE 150
+S ++SFG LL +L + +P LD + +R +M C E
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPES--------- 243
Query: 151 LVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
L L +C + +P ERP + L L TE
Sbjct: 244 LHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 277
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 12/159 (7%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 81
+A+ +E+ S+ + ++ DL A IL E ++ FGL ++ Y
Sbjct: 155 FQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 213
Query: 82 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLE 140
L + PE + T +S ++SFG LL ++ S G P +D R L+ T
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT----R 269
Query: 141 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
+ D E+ + C EP +RP LV L L
Sbjct: 270 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 25/154 (16%)
Query: 44 LYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVT 96
++ DL A IL E+ +++ FGL + +R G + + +T PE GR T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFP--IKWTAPEAALYGRFT 193
Query: 97 PESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQM-LTDSCLEGQFTDDDGTE 150
+S ++SFG LL +L + +P LD + +R +M C E
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPES--------- 243
Query: 151 LVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
L L +C + +P ERP + L L TE
Sbjct: 244 LHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 277
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 75/164 (45%), Gaps = 25/164 (15%)
Query: 27 VLH-LAQALEYCTSKGRALYHDLNAYRILF-DEDGNP---RLSTFGLMKNSRDGKS---- 77
VLH + + +EY S+G ++ DL IL+ DE GNP R+ FG K R
Sbjct: 126 VLHTIGKTVEYLHSQG-VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMT 184
Query: 78 --YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT 135
Y+ N F PE L+ I+S G LL +L+G + P ++ D ++LT
Sbjct: 185 PCYTAN--FVAPEVLKRQGYDEGCDIWSLGILLYTMLAG-YTPFANGPS---DTPEEILT 238
Query: 136 DSCLEGQFTDDDG-----TELVR-LASRCLQYEPRERPNPKSLV 173
G+FT G +E + L S+ L +P +R K ++
Sbjct: 239 -RIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVL 281
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 12/159 (7%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 81
+A+ +E+ S+ + ++ DL A IL E ++ FGL ++ Y
Sbjct: 200 FQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 82 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLE 140
L + PE + T +S ++SFG LL ++ S G P +D R L+ T
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM--- 315
Query: 141 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
+ D E+ + C EP +RP LV L L
Sbjct: 316 -RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 353
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 10/97 (10%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKSYSTN 81
+A+ + Y K ++ DL A +L E +++ FGL + +R+G +
Sbjct: 118 QIAEGMAYIERKNY-IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFP-- 174
Query: 82 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 118
+ +T PE + G T +S ++SFG LL ++++ IP
Sbjct: 175 IKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIP 211
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 25/154 (16%)
Query: 44 LYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVT 96
++ DL A IL E+ +++ FGL + +R G + + +T PE GR T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFT 193
Query: 97 PESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQM-LTDSCLEGQFTDDDGTE 150
+S ++SFG LL +L + +P LD + +R +M C E
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPES--------- 243
Query: 151 LVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
L L +C + +P ERP + L L TE
Sbjct: 244 LHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 277
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 68/146 (46%), Gaps = 8/146 (5%)
Query: 32 QALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----P 87
QALE+ S + ++ ++ + IL DG+ +L+ FG +S + + TP P
Sbjct: 128 QALEFLHSN-QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 186
Query: 88 EYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 147
E + P+ I+S G + ++++ G+ PP + +R L + T+ E Q +
Sbjct: 187 EVVTRKAYGPKVDIWSLGIMAIEMIEGE--PPYLNENPLRALYL-IATNGTPELQNPEKL 243
Query: 148 GTELVRLASRCLQYEPRERPNPKSLV 173
+RCL+ + +R + K L+
Sbjct: 244 SAIFRDFLNRCLEMDVEKRGSAKELI 269
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 25/154 (16%)
Query: 44 LYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVT 96
++ DL A IL E+ +++ FGL + +R G + + +T PE GR T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFT 193
Query: 97 PESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQM-LTDSCLEGQFTDDDGTE 150
+S ++SFG LL +L + +P LD + +R +M C E
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPES--------- 243
Query: 151 LVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
L L +C + +P ERP + L L TE
Sbjct: 244 LHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 277
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 83/178 (46%), Gaps = 24/178 (13%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-- 81
L + ++ A+EY K ++ DL A L E+ +++ FGL + G +Y+
Sbjct: 115 LYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAPAG 172
Query: 82 ----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQ 132
+ +T PE L + + +S +++FG LL ++ + + P +DL + +++ +
Sbjct: 173 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDYR 231
Query: 133 M-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHV 189
M + C E + EL+R C Q+ P +RP+ + A + +E+ + V
Sbjct: 232 MERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 280
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 12/159 (7%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 81
+A+ +E+ S+ + ++ DL A IL E ++ FGL ++ Y
Sbjct: 207 FQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 82 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLE 140
L + PE + T +S ++SFG LL ++ S G P +D R L+ T
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM--- 322
Query: 141 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
+ D E+ + C EP +RP LV L L
Sbjct: 323 -RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 360
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 65/153 (42%), Gaps = 16/153 (10%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILF-DEDGNP---RLSTFGLMKNSRDGKS---- 77
V+ + + +EY ++G ++ DL IL+ DE GNP R+ FG K R
Sbjct: 121 VLFTITKTVEYLHAQG-VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMT 179
Query: 78 --YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT 135
Y+ N F PE L I+S G LL +L+G + P ++ D + L +
Sbjct: 180 PCYTAN--FVAPEVLERQGYDAACDIWSLGVLLYTMLTG-YTPFANGPDDTPEEILARIG 236
Query: 136 DS--CLEGQFTDDDGTELVRLASRCLQYEPRER 166
L G + + L S+ L +P +R
Sbjct: 237 SGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQR 269
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 12/159 (7%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 81
+A+ +E+ S+ + ++ DL A IL E ++ FGL ++ Y
Sbjct: 198 FQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 82 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLE 140
L + PE + T +S ++SFG LL ++ S G P +D R L+ T
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM--- 313
Query: 141 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
+ D E+ + C EP +RP LV L L
Sbjct: 314 -RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 351
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 12/159 (7%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 81
+A+ +E+ S+ + ++ DL A IL E ++ FGL ++ Y
Sbjct: 151 FQVAKGMEFLASR-KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLP 209
Query: 82 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLE 140
L + PE + T +S ++SFG LL ++ S G P +D R L+ T
Sbjct: 210 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGT----R 265
Query: 141 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
+ D E+ + C EP +RP LV L L
Sbjct: 266 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 304
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 25/154 (16%)
Query: 44 LYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVT 96
++ DL A IL E+ +++ FGL + +R G + + +T PE GR T
Sbjct: 127 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFT 184
Query: 97 PESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQM-LTDSCLEGQFTDDDGTE 150
+S ++SFG LL +L + +P LD + +R +M C E
Sbjct: 185 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPES--------- 234
Query: 151 LVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
L L +C + +P ERP + L L TE
Sbjct: 235 LHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 268
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 83/178 (46%), Gaps = 24/178 (13%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-- 81
L + ++ A+EY K ++ DL A L E+ +++ FGL + G +Y+
Sbjct: 116 LYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAPAG 173
Query: 82 ----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQ 132
+ +T PE L + + +S +++FG LL ++ + + P +DL + +++ +
Sbjct: 174 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDYR 232
Query: 133 M-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHV 189
M + C E + EL+R C Q+ P +RP+ + A + +E+ + V
Sbjct: 233 MERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 281
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 12/159 (7%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 81
+A+ +E+ S+ + ++ DL A IL E ++ FGL ++ Y
Sbjct: 192 FQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 250
Query: 82 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLE 140
L + PE + T +S ++SFG LL ++ S G P +D R L+ T
Sbjct: 251 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM--- 307
Query: 141 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
+ D E+ + C EP +RP LV L L
Sbjct: 308 -RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 345
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 25/154 (16%)
Query: 44 LYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVT 96
++ DL A IL E+ +++ FGL + +R G + + +T PE GR T
Sbjct: 125 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFT 182
Query: 97 PESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQM-LTDSCLEGQFTDDDGTE 150
+S ++SFG LL +L + +P LD + +R +M C E
Sbjct: 183 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPES--------- 232
Query: 151 LVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
L L +C + +P ERP + L L TE
Sbjct: 233 LHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 266
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 68/162 (41%), Gaps = 10/162 (6%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-----LA 83
L+ AL Y SK R ++ D+ A +L + +L FGL + D Y + +
Sbjct: 119 QLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 177
Query: 84 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
+ PE + R T S ++ FG + ++L P +++ ++ ++
Sbjct: 178 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGERLPM 233
Query: 144 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 185
+ L L ++C Y+P RP L LS + +E ++
Sbjct: 234 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKL 275
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 8/146 (5%)
Query: 32 QALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----P 87
QALE+ S + ++ D+ + IL DG+ +L+ FG +S + + TP P
Sbjct: 127 QALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 185
Query: 88 EYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 147
E + P+ I+S G + ++++ G+ PP + +R L + T+ E Q +
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGE--PPYLNENPLRALYL-IATNGTPELQNPEKL 242
Query: 148 GTELVRLASRCLQYEPRERPNPKSLV 173
+RCL + +R + K L+
Sbjct: 243 SAIFRDFLNRCLDMDVEKRGSAKELL 268
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 12/159 (7%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 81
+A+ +E+ S+ + ++ DL A IL E ++ FGL ++ Y
Sbjct: 205 FQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 82 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLE 140
L + PE + T +S ++SFG LL ++ S G P +D R L+ T
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT----R 319
Query: 141 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
+ D E+ + C EP +RP LV L L
Sbjct: 320 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 358
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 25/154 (16%)
Query: 44 LYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVT 96
++ DL A IL E+ +++ FGL + +R G + + +T PE GR T
Sbjct: 136 VHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFT 193
Query: 97 PESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQM-LTDSCLEGQFTDDDGTE 150
+S ++SFG LL +L + +P LD + +R +M C E
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPES--------- 243
Query: 151 LVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
L L +C + +P ERP + L L TE
Sbjct: 244 LHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 277
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 8/146 (5%)
Query: 32 QALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----P 87
QALE+ S + ++ D+ + IL DG+ +L+ FG +S + + TP P
Sbjct: 127 QALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAP 185
Query: 88 EYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 147
E + P+ I+S G + ++++ G+ PP + +R L + T+ E Q +
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGE--PPYLNENPLRALYL-IATNGTPELQNPEKL 242
Query: 148 GTELVRLASRCLQYEPRERPNPKSLV 173
+RCL + +R + K L+
Sbjct: 243 SAIFRDFLNRCLDMDVEKRGSAKELL 268
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 68/162 (41%), Gaps = 10/162 (6%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-----LA 83
L+ AL Y SK R ++ D+ A +L + +L FGL + D Y + +
Sbjct: 119 QLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 177
Query: 84 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
+ PE + R T S ++ FG + ++L P +++ ++ ++
Sbjct: 178 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGERLPM 233
Query: 144 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 185
+ L L ++C Y+P RP L LS + +E ++
Sbjct: 234 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKL 275
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 66/159 (41%), Gaps = 10/159 (6%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-----LA 83
L+ AL Y SK R ++ D+ A +L + +L FGL + D Y + +
Sbjct: 124 QLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 182
Query: 84 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
+ PE + R T S ++ FG + ++L P +++ ++ ++
Sbjct: 183 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGERLPM 238
Query: 144 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 182
+ L L ++C Y+P RP L LS + +E
Sbjct: 239 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 277
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 66/159 (41%), Gaps = 10/159 (6%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-----LA 83
L+ AL Y SK R ++ D+ A +L + +L FGL + D Y + +
Sbjct: 147 QLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 205
Query: 84 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
+ PE + R T S ++ FG + ++L P +++ ++ ++
Sbjct: 206 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGERLPM 261
Query: 144 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 182
+ L L ++C Y+P RP L LS + +E
Sbjct: 262 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 300
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 5/128 (3%)
Query: 42 RALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGRVTPE 98
R +Y DL IL D+ G+ R+S GL + +G K + + PE ++ R T
Sbjct: 306 RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFS 365
Query: 99 SVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 158
++ G LL ++++G+ P I+ ++ L E ++++ + L S+
Sbjct: 366 PDWWALGCLLYEMIAGQS-PFQQRKKKIKREEVERLVKEVPE-EYSERFSPQARSLCSQL 423
Query: 159 LQYEPRER 166
L +P ER
Sbjct: 424 LCKDPAER 431
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 5/128 (3%)
Query: 42 RALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGRVTPE 98
R +Y DL IL D+ G+ R+S GL + +G K + + PE ++ R T
Sbjct: 306 RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFS 365
Query: 99 SVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 158
++ G LL ++++G+ P I+ ++ L E ++++ + L S+
Sbjct: 366 PDWWALGCLLYEMIAGQS-PFQQRKKKIKREEVERLVKEVPE-EYSERFSPQARSLCSQL 423
Query: 159 LQYEPRER 166
L +P ER
Sbjct: 424 LCKDPAER 431
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 9/111 (8%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT 85
V L + +AL Y ++G ++ D+ + IL DG +LS FG L T
Sbjct: 146 VCLSVLRALSYLHNQG-VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGT 204
Query: 86 P----PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRD 128
P PE + E I+S G ++++++ G+ + PP A+ IRD
Sbjct: 205 PYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRD 255
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 65/141 (46%), Gaps = 10/141 (7%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS-RDG---KSYSTNLAFT 85
+ AL+Y S+ +Y DL ++ D+DG+ +++ FGL K +DG K++ +
Sbjct: 257 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYL 316
Query: 86 PPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD 145
PE L + G ++ +++ G+ P + D + L ++ E +F
Sbjct: 317 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHEKLFELILME----EIRFPR 370
Query: 146 DDGTELVRLASRCLQYEPRER 166
G E L S L+ +P++R
Sbjct: 371 TLGPEAKSLLSGLLKKDPKQR 391
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 66/159 (41%), Gaps = 10/159 (6%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-----LA 83
L+ AL Y SK R ++ D+ A +L + +L FGL + D Y + +
Sbjct: 121 QLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 179
Query: 84 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
+ PE + R T S ++ FG + ++L P +++ ++ ++
Sbjct: 180 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGERLPM 235
Query: 144 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 182
+ L L ++C Y+P RP L LS + +E
Sbjct: 236 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 274
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 66/159 (41%), Gaps = 10/159 (6%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-----LA 83
L+ AL Y SK R ++ D+ A +L + +L FGL + D Y + +
Sbjct: 116 QLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 174
Query: 84 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
+ PE + R T S ++ FG + ++L P +++ ++ ++
Sbjct: 175 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGERLPM 230
Query: 144 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 182
+ L L ++C Y+P RP L LS + +E
Sbjct: 231 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 269
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 12/159 (7%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 81
+A+ +E+ S+ + ++ DL A IL E ++ FGL ++ Y
Sbjct: 151 FQVAKGMEFLASR-KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 209
Query: 82 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLE 140
L + PE + T +S ++SFG LL ++ S G P +D R L+ T
Sbjct: 210 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT----R 265
Query: 141 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
+ D E+ + C EP +RP LV L L
Sbjct: 266 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 304
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 65/141 (46%), Gaps = 10/141 (7%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS-RDG---KSYSTNLAFT 85
+ AL+Y S+ +Y DL ++ D+DG+ +++ FGL K +DG K++ +
Sbjct: 260 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYL 319
Query: 86 PPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD 145
PE L + G ++ +++ G+ P + D + L ++ E +F
Sbjct: 320 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHEKLFELILME----EIRFPR 373
Query: 146 DDGTELVRLASRCLQYEPRER 166
G E L S L+ +P++R
Sbjct: 374 TLGPEAKSLLSGLLKKDPKQR 394
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 76/177 (42%), Gaps = 19/177 (10%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY----- 78
L+ + + +EY +K R ++ DL IL + + ++ FGL K K
Sbjct: 148 LQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 206
Query: 79 --STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKHIPPSHALDLI-RDRNLQ 132
+ + + PE L + + S ++SFG +L +L + PP+ + +I D+ Q
Sbjct: 207 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQ 266
Query: 133 MLTDSCLE-----GQFTDDDGT--ELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 182
M+ +E G+ DG E+ + + C +RP+ + L + ++ +
Sbjct: 267 MIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 66/159 (41%), Gaps = 10/159 (6%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-----LA 83
L+ AL Y SK R ++ D+ A +L + +L FGL + D Y + +
Sbjct: 122 QLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 180
Query: 84 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
+ PE + R T S ++ FG + ++L P +++ ++ ++
Sbjct: 181 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGERLPM 236
Query: 144 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 182
+ L L ++C Y+P RP L LS + +E
Sbjct: 237 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 275
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 25/154 (16%)
Query: 44 LYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVT 96
++ DL A IL E+ +++ FGL + +R G + + +T PE GR T
Sbjct: 303 VHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFP--IKWTAPEAALYGRFT 360
Query: 97 PESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQM-LTDSCLEGQFTDDDGTE 150
+S ++SFG LL +L + +P LD + +R +M C E
Sbjct: 361 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPE---------S 410
Query: 151 LVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
L L +C + +P ERP + L L TE
Sbjct: 411 LHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 444
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 13/119 (10%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP-- 86
+ A++YC K ++ DL A +L D D N +++ FG G T P
Sbjct: 122 QIVSAVQYCHQK-YIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYA 180
Query: 87 -PEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
PE + + PE ++S G +L L+SG S D +NL+ L + L G++
Sbjct: 181 APELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFD---GQNLKELRERVLRGKY 231
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 16/155 (10%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--------- 74
L V +A +Y + ++ D+ A L G R++ G +RD
Sbjct: 143 LHVARDIACGCQY-LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 201
Query: 75 GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDRNLQM 133
G + + PPE G T ++ +SFG LL ++ S ++P PS + L+
Sbjct: 202 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS----NQEVLEF 257
Query: 134 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 168
+T + G + R+ ++C Q++P +RPN
Sbjct: 258 VTSGGRMDPPKNCPGP-VYRIMTQCWQHQPEDRPN 291
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 16/155 (10%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--------- 74
L V +A +Y + ++ D+ A L G R++ G +RD
Sbjct: 143 LHVARDIACGCQY-LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 201
Query: 75 GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDRNLQM 133
G + + PPE G T ++ +SFG LL ++ S ++P PS + L+
Sbjct: 202 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS----NQEVLEF 257
Query: 134 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 168
+T + G + R+ ++C Q++P +RPN
Sbjct: 258 VTSGGRMDPPKNCPGP-VYRIMTQCWQHQPEDRPN 291
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 82/172 (47%), Gaps = 24/172 (13%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-- 81
L + ++ A+EY K ++ DL A L E+ +++ FGL + G +Y+ +
Sbjct: 118 LYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAG 175
Query: 82 ----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQ 132
+ +T PE L + + +S +++FG LL ++ + + P +DL + +++ +
Sbjct: 176 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDYR 234
Query: 133 M-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 183
M + C E + EL+R C Q+ P +RP+ + A + +E+
Sbjct: 235 MERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFETMFQES 277
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 75/175 (42%), Gaps = 19/175 (10%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY----- 78
L+ + + +EY +K R ++ DL IL + + ++ FGL K K
Sbjct: 120 LQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 178
Query: 79 --STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKHIPPSHALDLI-RDRNLQ 132
+ + + PE L + + S ++SFG +L +L + PP+ + +I D+ Q
Sbjct: 179 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQ 238
Query: 133 MLTDSCLE-----GQFTDDDGT--ELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180
M+ +E G+ DG E+ + + C +RP+ + L + ++
Sbjct: 239 MIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 293
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 76/177 (42%), Gaps = 19/177 (10%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY----- 78
L+ + + +EY +K R ++ DL IL + + ++ FGL K K
Sbjct: 115 LQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 173
Query: 79 --STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKHIPPSHALDLI-RDRNLQ 132
+ + + PE L + + S ++SFG +L +L + PP+ + +I D+ Q
Sbjct: 174 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQ 233
Query: 133 MLTDSCLE-----GQFTDDDGT--ELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 182
M+ +E G+ DG E+ + + C +RP+ + L + ++ +
Sbjct: 234 MIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 290
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 75/175 (42%), Gaps = 19/175 (10%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY----- 78
L+ + + +EY +K R ++ DL IL + + ++ FGL K K
Sbjct: 123 LQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 181
Query: 79 --STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKHIPPSHALDLI-RDRNLQ 132
+ + + PE L + + S ++SFG +L +L + PP+ + +I D+ Q
Sbjct: 182 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQ 241
Query: 133 MLTDSCLE-----GQFTDDDGT--ELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180
M+ +E G+ DG E+ + + C +RP+ + L + ++
Sbjct: 242 MIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 296
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 75/175 (42%), Gaps = 19/175 (10%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY----- 78
L+ + + +EY +K R ++ DL IL + + ++ FGL K K
Sbjct: 135 LQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 193
Query: 79 --STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKHIPPSHALDLI-RDRNLQ 132
+ + + PE L + + S ++SFG +L +L + PP+ + +I D+ Q
Sbjct: 194 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQ 253
Query: 133 MLTDSCLE-----GQFTDDDGT--ELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180
M+ +E G+ DG E+ + + C +RP+ + L + ++
Sbjct: 254 MIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 308
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 75/175 (42%), Gaps = 19/175 (10%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY----- 78
L+ + + +EY +K R ++ DL IL + + ++ FGL K K
Sbjct: 122 LQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 180
Query: 79 --STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKHIPPSHALDLI-RDRNLQ 132
+ + + PE L + + S ++SFG +L +L + PP+ + +I D+ Q
Sbjct: 181 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQ 240
Query: 133 MLTDSCLE-----GQFTDDDGT--ELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180
M+ +E G+ DG E+ + + C +RP+ + L + ++
Sbjct: 241 MIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 295
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 75/175 (42%), Gaps = 19/175 (10%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY----- 78
L+ + + +EY +K R ++ DL IL + + ++ FGL K K
Sbjct: 117 LQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 175
Query: 79 --STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKHIPPSHALDLI-RDRNLQ 132
+ + + PE L + + S ++SFG +L +L + PP+ + +I D+ Q
Sbjct: 176 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQ 235
Query: 133 MLTDSCLE-----GQFTDDDGT--ELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180
M+ +E G+ DG E+ + + C +RP+ + L + ++
Sbjct: 236 MIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 290
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 71/170 (41%), Gaps = 26/170 (15%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-----LA 83
L+ AL Y SK R ++ D+ A +L + +L FGL + D Y + +
Sbjct: 499 QLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 557
Query: 84 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
+ PE + R T S ++ FG + ++L H + + Q + ++ + G+
Sbjct: 558 WMAPESINFRRFTSASDVWMFGVCMWEILM-------HGV-----KPFQGVKNNDVIGRI 605
Query: 144 TDDDGT--------ELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 185
+ + L L ++C Y+P RP L LS + +E ++
Sbjct: 606 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKL 655
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 75/175 (42%), Gaps = 19/175 (10%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY----- 78
L+ + + +EY +K R ++ DL IL + + ++ FGL K K
Sbjct: 120 LQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 178
Query: 79 --STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKHIPPSHALDLI-RDRNLQ 132
+ + + PE L + + S ++SFG +L +L + PP+ + +I D+ Q
Sbjct: 179 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQ 238
Query: 133 MLTDSCLE-----GQFTDDDGT--ELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180
M+ +E G+ DG E+ + + C +RP+ + L + ++
Sbjct: 239 MIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 293
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 82/172 (47%), Gaps = 24/172 (13%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-- 81
L + ++ A+EY K ++ DL A L E+ +++ FGL + G +Y+ +
Sbjct: 114 LYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAG 171
Query: 82 ----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQ 132
+ +T PE L + + +S +++FG LL ++ + + P +DL + +++ +
Sbjct: 172 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDYR 230
Query: 133 M-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 183
M + C E + EL+R C Q+ P +RP+ + A + +E+
Sbjct: 231 MERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 16/155 (10%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--------- 74
L V +A +Y + ++ D+ A L G R++ G +RD
Sbjct: 135 LHVARDIACGCQY-LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 193
Query: 75 GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDRNLQM 133
G + + PPE G T ++ +SFG LL ++ S ++P PS + L+
Sbjct: 194 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS----NQEVLEF 249
Query: 134 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 168
+T + G + R+ ++C Q++P +RPN
Sbjct: 250 VTSGGRMDPPKNCPGP-VYRIMTQCWQHQPEDRPN 283
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 75/175 (42%), Gaps = 19/175 (10%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY----- 78
L+ + + +EY +K R ++ DL IL + + ++ FGL K K
Sbjct: 117 LQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 175
Query: 79 --STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKHIPPSHALDLI-RDRNLQ 132
+ + + PE L + + S ++SFG +L +L + PP+ + +I D+ Q
Sbjct: 176 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQ 235
Query: 133 MLTDSCLE-----GQFTDDDGT--ELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180
M+ +E G+ DG E+ + + C +RP+ + L + ++
Sbjct: 236 MIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 290
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 75/175 (42%), Gaps = 19/175 (10%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY----- 78
L+ + + +EY +K R ++ DL IL + + ++ FGL K K
Sbjct: 120 LQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 178
Query: 79 --STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKHIPPSHALDLI-RDRNLQ 132
+ + + PE L + + S ++SFG +L +L + PP+ + +I D+ Q
Sbjct: 179 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQ 238
Query: 133 MLTDSCLE-----GQFTDDDGT--ELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180
M+ +E G+ DG E+ + + C +RP+ + L + ++
Sbjct: 239 MIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 293
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 16/155 (10%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--------- 74
L V +A +Y + ++ D+ A L G R++ G +RD
Sbjct: 158 LHVARDIACGCQY-LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 216
Query: 75 GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDRNLQM 133
G + + PPE G T ++ +SFG LL ++ S ++P PS + L+
Sbjct: 217 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS----NQEVLEF 272
Query: 134 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 168
+T + G + R+ ++C Q++P +RPN
Sbjct: 273 VTSGGRMDPPKNCPGP-VYRIMTQCWQHQPEDRPN 306
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 75/175 (42%), Gaps = 19/175 (10%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY----- 78
L+ + + +EY +K R ++ DL IL + + ++ FGL K K
Sbjct: 135 LQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 193
Query: 79 --STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKHIPPSHALDLI-RDRNLQ 132
+ + + PE L + + S ++SFG +L +L + PP+ + +I D+ Q
Sbjct: 194 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQ 253
Query: 133 MLTDSCLE-----GQFTDDDGT--ELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180
M+ +E G+ DG E+ + + C +RP+ + L + ++
Sbjct: 254 MIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 308
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 75/175 (42%), Gaps = 19/175 (10%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY----- 78
L+ + + +EY +K R ++ DL IL + + ++ FGL K K
Sbjct: 121 LQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 179
Query: 79 --STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKHIPPSHALDLI-RDRNLQ 132
+ + + PE L + + S ++SFG +L +L + PP+ + +I D+ Q
Sbjct: 180 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQ 239
Query: 133 MLTDSCLE-----GQFTDDDGT--ELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180
M+ +E G+ DG E+ + + C +RP+ + L + ++
Sbjct: 240 MIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 294
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 16/155 (10%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--------- 74
L V +A +Y + ++ D+ A L G R++ G +RD
Sbjct: 160 LHVARDIACGCQY-LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 218
Query: 75 GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDRNLQM 133
G + + PPE G T ++ +SFG LL ++ S ++P PS + L+
Sbjct: 219 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS----NQEVLEF 274
Query: 134 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 168
+T + G + R+ ++C Q++P +RPN
Sbjct: 275 VTSGGRMDPPKNCPGP-VYRIMTQCWQHQPEDRPN 308
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 16/155 (10%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--------- 74
L V +A +Y + ++ D+ A L G R++ G +RD
Sbjct: 158 LHVARDIACGCQY-LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 216
Query: 75 GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDRNLQM 133
G + + PPE G T ++ +SFG LL ++ S ++P PS + L+
Sbjct: 217 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS----NQEVLEF 272
Query: 134 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 168
+T + G + R+ ++C Q++P +RPN
Sbjct: 273 VTSGGRMDPPKNCPGP-VYRIMTQCWQHQPEDRPN 306
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 16/155 (10%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--------- 74
L V +A +Y + ++ D+ A L G R++ G +RD
Sbjct: 161 LHVARDIACGCQY-LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRK 219
Query: 75 GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDRNLQM 133
G + + PPE G T ++ +SFG LL ++ S ++P PS + L+
Sbjct: 220 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS----NQEVLEF 275
Query: 134 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 168
+T + G + R+ ++C Q++P +RPN
Sbjct: 276 VTSGGRMDPPKNCPGP-VYRIMTQCWQHQPEDRPN 309
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 75/175 (42%), Gaps = 19/175 (10%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY----- 78
L+ + + +EY +K R ++ DL IL + + ++ FGL K K
Sbjct: 124 LQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 182
Query: 79 --STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKHIPPSHALDLI-RDRNLQ 132
+ + + PE L + + S ++SFG +L +L + PP+ + +I D+ Q
Sbjct: 183 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQ 242
Query: 133 MLTDSCLE-----GQFTDDDGT--ELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180
M+ +E G+ DG E+ + + C +RP+ + L + ++
Sbjct: 243 MIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 297
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 75/175 (42%), Gaps = 19/175 (10%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY----- 78
L+ + + +EY +K R ++ DL IL + + ++ FGL K K
Sbjct: 116 LQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 174
Query: 79 --STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKHIPPSHALDLI-RDRNLQ 132
+ + + PE L + + S ++SFG +L +L + PP+ + +I D+ Q
Sbjct: 175 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQ 234
Query: 133 MLTDSCLE-----GQFTDDDGT--ELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180
M+ +E G+ DG E+ + + C +RP+ + L + ++
Sbjct: 235 MIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 289
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 16/155 (10%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--------- 74
L V +A +Y + ++ D+ A L G R++ G +RD
Sbjct: 144 LHVARDIACGCQY-LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 202
Query: 75 GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDRNLQM 133
G + + PPE G T ++ +SFG LL ++ S ++P PS + L+
Sbjct: 203 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS----NQEVLEF 258
Query: 134 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 168
+T + G + R+ ++C Q++P +RPN
Sbjct: 259 VTSGGRMDPPKNCPGP-VYRIMTQCWQHQPEDRPN 292
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 76/175 (43%), Gaps = 17/175 (9%)
Query: 23 RLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN 81
RL + +A+ + Y ++ + H +L + +L D+ ++ FGL + S +
Sbjct: 139 RLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKS 198
Query: 82 LAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRDRNLQM 133
A TP PE LR +S +YSFG +L +L + + ++ P+ + + +
Sbjct: 199 AAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFK---- 254
Query: 134 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSH 188
C + + ++ + C EP +RP+ +++ L PL K P +
Sbjct: 255 ----CKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPPN 305
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 16/155 (10%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--------- 74
L V +A +Y + ++ D+ A L G R++ G +RD
Sbjct: 144 LHVARDIACGCQY-LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 202
Query: 75 GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDRNLQM 133
G + + PPE G T ++ +SFG LL ++ S ++P PS + L+
Sbjct: 203 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS----NQEVLEF 258
Query: 134 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 168
+T + G + R+ ++C Q++P +RPN
Sbjct: 259 VTSGGRMDPPKNCPGP-VYRIMTQCWQHQPEDRPN 292
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 84/178 (47%), Gaps = 24/178 (13%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-- 81
L + ++ A+EY K ++ +L A L E+ +++ FGL + G +Y+ +
Sbjct: 321 LYMATQISSAMEYLEKK-NFIHRNLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAG 378
Query: 82 ----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQ 132
+ +T PE L + + +S +++FG LL ++ + + P +DL + +++ +
Sbjct: 379 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDYR 437
Query: 133 M-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHV 189
M + C E + EL+R C Q+ P +RP+ + A + +E+ + V
Sbjct: 438 MERPEGCPEKVY------ELMRA---CWQWNPSDRPSFAEIHQAFETMFQESSISDEV 486
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 81
L +A+ +++ SK + ++ DL A + DE +++ FGL ++ D + S +
Sbjct: 141 LQVAKGMKFLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK 199
Query: 82 --LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 139
+ + E L+T + T +S ++SFG LL +L++ + PP ++ + L
Sbjct: 200 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLL 258
Query: 140 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
+ ++ D L + +C + RP+ LV+ +S +
Sbjct: 259 QPEYCPD---PLYEVMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 82/179 (45%), Gaps = 26/179 (14%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGK 76
L + ++ A+EY K ++ DL A L E+ +++ FGL + + G
Sbjct: 115 LYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA 173
Query: 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNL 131
+ + +T PE L + + +S +++FG LL ++ + + P +DL + +++
Sbjct: 174 KFP--IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDY 230
Query: 132 QM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHV 189
+M + C E + EL+R C Q+ P +RP+ + A + +E+ + V
Sbjct: 231 RMERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 280
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 81
L +A+ +++ SK + ++ DL A + DE +++ FGL ++ D + S +
Sbjct: 138 LQVAKGMKFLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK 196
Query: 82 --LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 139
+ + E L+T + T +S ++SFG LL +L++ + PP ++ + L
Sbjct: 197 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLL 255
Query: 140 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
+ ++ D L + +C + RP+ LV+ +S +
Sbjct: 256 QPEYCPD---PLYEVMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 84/178 (47%), Gaps = 24/178 (13%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-- 81
L + ++ A+EY K ++ +L A L E+ +++ FGL + G +Y+ +
Sbjct: 318 LYMATQISSAMEYLEKK-NFIHRNLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAG 375
Query: 82 ----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQ 132
+ +T PE L + + +S +++FG LL ++ + + P +DL + +++ +
Sbjct: 376 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDYR 434
Query: 133 M-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHV 189
M + C E + EL+R C Q+ P +RP+ + A + +E+ + V
Sbjct: 435 MERPEGCPEKVY------ELMRA---CWQWNPSDRPSFAEIHQAFETMFQESSISDEV 483
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 16/155 (10%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--------- 74
L V +A +Y + ++ D+ A L G R++ G +RD
Sbjct: 150 LHVARDIACGCQY-LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 208
Query: 75 GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDRNLQM 133
G + + PPE G T ++ +SFG LL ++ S ++P PS + L+
Sbjct: 209 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS----NQEVLEF 264
Query: 134 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 168
+T + G + R+ ++C Q++P +RPN
Sbjct: 265 VTSGGRMDPPKNCPGP-VYRIMTQCWQHQPEDRPN 298
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 81
L +A+ +++ SK + ++ DL A + DE +++ FGL ++ D + S +
Sbjct: 140 LQVAKGMKFLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK 198
Query: 82 --LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 139
+ + E L+T + T +S ++SFG LL +L++ + PP ++ + L
Sbjct: 199 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLL 257
Query: 140 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
+ ++ D L + +C + RP+ LV+ +S +
Sbjct: 258 QPEYCPD---PLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 81
L +A+ +++ SK + ++ DL A + DE +++ FGL ++ D + S +
Sbjct: 145 LQVAKGMKFLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK 203
Query: 82 --LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 139
+ + E L+T + T +S ++SFG LL +L++ + PP ++ + L
Sbjct: 204 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLL 262
Query: 140 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
+ ++ D L + +C + RP+ LV+ +S +
Sbjct: 263 QPEYCPD---PLYEVMLKCWHPKAEMRPSFSELVSRISAI 299
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 81
L +A+ +++ SK + ++ DL A + DE +++ FGL ++ D + S +
Sbjct: 140 LQVAKGMKFLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK 198
Query: 82 --LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 139
+ + E L+T + T +S ++SFG LL +L++ + PP ++ + L
Sbjct: 199 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLL 257
Query: 140 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
+ ++ D L + +C + RP+ LV+ +S +
Sbjct: 258 QPEYCPD---PLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 81
L +A+ +++ SK + ++ DL A + DE +++ FGL ++ D + S +
Sbjct: 199 LQVAKGMKFLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK 257
Query: 82 --LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 139
+ + E L+T + T +S ++SFG LL +L++ + PP ++ + L
Sbjct: 258 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLL 316
Query: 140 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
+ ++ D L + +C + RP+ LV+ +S +
Sbjct: 317 QPEYCPD---PLYEVMLKCWHPKAEMRPSFSELVSRISAI 353
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 16/155 (10%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--------- 74
L V +A +Y + ++ D+ A L G R++ G +RD
Sbjct: 170 LHVARDIACGCQY-LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 228
Query: 75 GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDRNLQM 133
G + + PPE G T ++ +SFG LL ++ S ++P PS + L+
Sbjct: 229 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS----NQEVLEF 284
Query: 134 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 168
+T + G + R+ ++C Q++P +RPN
Sbjct: 285 VTSGGRMDPPKNCPGP-VYRIMTQCWQHQPEDRPN 318
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 13/119 (10%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP-- 86
+ A++YC K ++ DL A +L D D N +++ FG G T P
Sbjct: 121 QIVSAVQYCHQK-FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYA 179
Query: 87 -PEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
PE + + PE ++S G +L L+SG S D +NL+ L + L G++
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFD---GQNLKELRERVLRGKY 230
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 16/155 (10%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--------- 74
L V +A +Y + ++ D+ A L G R++ G +RD
Sbjct: 184 LHVARDIACGCQY-LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRK 242
Query: 75 GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDRNLQM 133
G + + PPE G T ++ +SFG LL ++ S ++P PS + L+
Sbjct: 243 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS----NQEVLEF 298
Query: 134 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 168
+T + G + R+ ++C Q++P +RPN
Sbjct: 299 VTSGGRMDPPKNCPGP-VYRIMTQCWQHQPEDRPN 332
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 81/171 (47%), Gaps = 24/171 (14%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-- 81
L + ++ A+EY K ++ DL A L E+ +++ FGL + G +Y+ +
Sbjct: 119 LYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAG 176
Query: 82 ----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQ 132
+ +T PE L + + +S +++FG LL ++ + + P +DL + +++ +
Sbjct: 177 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDYR 235
Query: 133 M-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 182
M + C E + EL+R C Q+ P +RP+ + A + +E
Sbjct: 236 MERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFETMFQE 277
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 14/160 (8%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN-------SRDGKSYST 80
+A+ +E+ S+ + ++ DL A IL E ++ FGL ++ R G +
Sbjct: 146 FQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA-RL 203
Query: 81 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCL 139
L + PE + T +S ++SFG LL ++ S G P +D R L+ T
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT---- 259
Query: 140 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
+ D E+ + C EP +RP LV L L
Sbjct: 260 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 13/119 (10%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP-- 86
+ A++YC K ++ DL A +L D D N +++ FG G T P
Sbjct: 121 QIVSAVQYCHQK-FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYA 179
Query: 87 -PEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
PE + + PE ++S G +L L+SG S D +NL+ L + L G++
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFD---GQNLKELRERVLRGKY 230
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 14/160 (8%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN-------SRDGKSYST 80
+A+ +E+ S+ + ++ DL A IL E ++ FGL ++ R G +
Sbjct: 146 FQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA-RL 203
Query: 81 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCL 139
L + PE + T +S ++SFG LL ++ S G P +D R L+ T
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT---- 259
Query: 140 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
+ D E+ + C EP +RP LV L L
Sbjct: 260 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 14/160 (8%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN-------SRDGKSYST 80
+A+ +E+ S+ + ++ DL A IL E ++ FGL ++ R G +
Sbjct: 155 FQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA-RL 212
Query: 81 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCL 139
L + PE + T +S ++SFG LL ++ S G P +D R L+ T
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT---- 268
Query: 140 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
+ D E+ + C EP +RP LV L L
Sbjct: 269 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 16/155 (10%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--------- 74
L V +A +Y + ++ D+ A L G R++ G +RD
Sbjct: 158 LHVARDIACGCQY-LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 216
Query: 75 GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDRNLQM 133
G + + PPE G T ++ +SFG LL ++ S ++P PS + L+
Sbjct: 217 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS----NQEVLEF 272
Query: 134 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 168
+T + G + R+ ++C Q++P +RPN
Sbjct: 273 VTSGGRMDPPKNCPGP-VYRIMTQCWQHQPEDRPN 306
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 13/119 (10%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP-- 86
+ A++YC K ++ DL A +L D D N +++ FG G T P
Sbjct: 114 QIVSAVQYCHQK-FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYA 172
Query: 87 -PEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
PE + + PE ++S G +L L+SG S D +NL+ L + L G++
Sbjct: 173 APELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFD---GQNLKELRERVLRGKY 223
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 81/171 (47%), Gaps = 24/171 (14%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-- 81
L + ++ A+EY K ++ DL A L E+ +++ FGL + G +Y+ +
Sbjct: 119 LYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAG 176
Query: 82 ----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQ 132
+ +T PE L + + +S +++FG LL ++ + + P +DL + +++ +
Sbjct: 177 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDYR 235
Query: 133 M-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 182
M + C E + EL+R C Q+ P +RP+ + A + +E
Sbjct: 236 MERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFETMFQE 277
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 13/119 (10%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP-- 86
+ A++YC K ++ DL A +L D D N +++ FG G T P
Sbjct: 121 QIVSAVQYCHQK-FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYA 179
Query: 87 -PEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
PE + + PE ++S G +L L+SG S D +NL+ L + L G++
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFD---GQNLKELRERVLRGKY 230
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 14/160 (8%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN-------SRDGKSYST 80
+A+ +E+ S+ + ++ DL A IL E ++ FGL ++ R G +
Sbjct: 155 FQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDA-RL 212
Query: 81 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCL 139
L + PE + T +S ++SFG LL ++ S G P +D R L+ T
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT---- 268
Query: 140 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
+ D E+ + C EP +RP LV L L
Sbjct: 269 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 81
L +A+ +++ SK + ++ DL A + DE +++ FGL ++ D + S +
Sbjct: 141 LQVAKGMKFLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAK 199
Query: 82 --LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 139
+ + E L+T + T +S ++SFG LL +L++ + PP ++ + L
Sbjct: 200 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLL 258
Query: 140 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
+ ++ D L + +C + RP+ LV+ +S +
Sbjct: 259 QPEYCPD---PLYEVMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 67/162 (41%), Gaps = 10/162 (6%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-----LA 83
L+ AL Y SK R ++ D+ A +L +L FGL + D Y + +
Sbjct: 119 QLSTALAYLESK-RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 177
Query: 84 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
+ PE + R T S ++ FG + ++L P +++ ++ ++
Sbjct: 178 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGERLPM 233
Query: 144 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 185
+ L L ++C Y+P RP L LS + +E ++
Sbjct: 234 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKL 275
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 64/141 (45%), Gaps = 10/141 (7%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS-RDG---KSYSTNLAFT 85
+ AL+Y S+ +Y DL ++ D+DG+ +++ FGL K +DG K + +
Sbjct: 119 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYL 178
Query: 86 PPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD 145
PE L + G ++ +++ G+ P + D + L ++ E +F
Sbjct: 179 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHEKLFELILME----EIRFPR 232
Query: 146 DDGTELVRLASRCLQYEPRER 166
G E L S L+ +P++R
Sbjct: 233 TLGPEAKSLLSGLLKKDPKQR 253
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 14/160 (8%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN-------SRDGKSYST 80
+A+ +E+ S+ + ++ DL A IL E ++ FGL ++ R G +
Sbjct: 155 FQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA-RL 212
Query: 81 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCL 139
L + PE + T +S ++SFG LL ++ S G P +D R L+ T
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT---- 268
Query: 140 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
+ D E+ + C EP +RP LV L L
Sbjct: 269 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 25 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA- 83
R+ + A++YC + ++ DL +L D N +++ FGL DG+ T+
Sbjct: 115 RLFQQILSAVDYC-HRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGS 173
Query: 84 --FTPPEYLRTGRV--TPESVIYSFGTLLLDLLSG------KHIP 118
+ PE + +GR+ PE I+S G +L LL G +H+P
Sbjct: 174 PNYAAPEVI-SGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP 217
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 64/141 (45%), Gaps = 10/141 (7%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS-RDG---KSYSTNLAFT 85
+ AL+Y S+ +Y DL ++ D+DG+ +++ FGL K +DG K + +
Sbjct: 118 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYL 177
Query: 86 PPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD 145
PE L + G ++ +++ G+ P + D + L ++ E +F
Sbjct: 178 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHEKLFELILME----EIRFPR 231
Query: 146 DDGTELVRLASRCLQYEPRER 166
G E L S L+ +P++R
Sbjct: 232 TLGPEAKSLLSGLLKKDPKQR 252
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 64/141 (45%), Gaps = 10/141 (7%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS-RDG---KSYSTNLAFT 85
+ AL+Y S+ +Y DL ++ D+DG+ +++ FGL K +DG K + +
Sbjct: 117 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYL 176
Query: 86 PPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD 145
PE L + G ++ +++ G+ P + D + L ++ E +F
Sbjct: 177 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHEKLFELILME----EIRFPR 230
Query: 146 DDGTELVRLASRCLQYEPRER 166
G E L S L+ +P++R
Sbjct: 231 TLGPEAKSLLSGLLKKDPKQR 251
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 84/178 (47%), Gaps = 24/178 (13%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-- 81
L + ++ A+EY K ++ +L A L E+ +++ FGL + G +Y+ +
Sbjct: 360 LYMATQISSAMEYLEKK-NFIHRNLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAG 417
Query: 82 ----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQ 132
+ +T PE L + + +S +++FG LL ++ + + P +DL + +++ +
Sbjct: 418 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDYR 476
Query: 133 M-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHV 189
M + C E + EL+R C Q+ P +RP+ + A + +E+ + V
Sbjct: 477 MERPEGCPEKVY------ELMRA---CWQWNPSDRPSFAEIHQAFETMFQESSISDEV 525
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 68/164 (41%), Gaps = 21/164 (12%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN------SRDGKS 77
+++ +A + Y +K + ++ +L A + D ++ FG+ ++ R G
Sbjct: 133 IQMAAEIADGMAYLNAK-KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGK 191
Query: 78 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQ 132
+ + PE L+ G T S ++SFG +L ++ S P L + D
Sbjct: 192 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL 251
Query: 133 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 176
D+C E T+L+R+ C Q+ P RP +V L
Sbjct: 252 DQPDNCPERV------TDLMRM---CWQFNPNMRPTFLEIVNLL 286
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 68/164 (41%), Gaps = 21/164 (12%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN------SRDGKS 77
+++ +A + Y +K + ++ +L A + D ++ FG+ ++ R G
Sbjct: 134 IQMAAEIADGMAYLNAK-KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGK 192
Query: 78 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQ 132
+ + PE L+ G T S ++SFG +L ++ S P L + D
Sbjct: 193 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL 252
Query: 133 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 176
D+C E T+L+R+ C Q+ P RP +V L
Sbjct: 253 DQPDNCPERV------TDLMRM---CWQFNPNMRPTFLEIVNLL 287
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 14/160 (8%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN-------SRDGKSYST 80
+A+ +E+ S+ + ++ DL A IL E ++ FGL ++ R G +
Sbjct: 155 FQVAKGMEFLASR-KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA-RL 212
Query: 81 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCL 139
L + PE + T +S ++SFG LL ++ S G P +D R L+ T
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT---- 268
Query: 140 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
+ D E+ + C EP +RP LV L L
Sbjct: 269 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 63/149 (42%), Gaps = 15/149 (10%)
Query: 44 LYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVT 96
++ DL + IL +++ FGL + +R G + + +T PE GR T
Sbjct: 127 IHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFP--IKWTAPEAALYGRFT 184
Query: 97 PESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 155
+S ++SFG LL +L++ +P P + +R + + D L L
Sbjct: 185 IKSDVWSFGILLTELVTKGRVPYPG-----MNNREVLEQVERGYRMPCPQDCPISLHELM 239
Query: 156 SRCLQYEPRERPNPKSLVTALSPLQKETE 184
C + +P ERP + L + L TE
Sbjct: 240 IHCWKKDPEERPTFEYLQSFLEDYFTATE 268
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 33 ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PE 88
ALEY SK +Y DL IL D++G+ +++ FG K D + L TP PE
Sbjct: 118 ALEYLHSKD-IIYRDLKPENILLDKNGHIKITDFGFAKYVPD---VTYXLCGTPDYIAPE 173
Query: 89 YLRTGRVTPESVIYSFGTLLLDLLSG 114
+ T +SFG L+ ++L+G
Sbjct: 174 VVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 70/170 (41%), Gaps = 26/170 (15%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-----LA 83
L+ AL Y SK R ++ D+ A +L +L FGL + D Y + +
Sbjct: 499 QLSTALAYLESK-RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 557
Query: 84 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
+ PE + R T S ++ FG + ++L H + + Q + ++ + G+
Sbjct: 558 WMAPESINFRRFTSASDVWMFGVCMWEILM-------HGV-----KPFQGVKNNDVIGRI 605
Query: 144 TDDDGT--------ELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 185
+ + L L ++C Y+P RP L LS + +E ++
Sbjct: 606 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKL 655
>pdb|2BUG|A Chain A, Solution Structure Of The Tpr Domain From Protein
Phosphatase 5 In Complex With Hsp90 Derived Peptide
Length = 140
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Query: 259 FRQKDLKDAIECYTQFIDAGTMVSPT---VYARRSLCYLMSDMPQDALNDAMQAQIISPI 315
F+ KD ++AI+ Y+Q I+ ++P+ Y RSL YL ++ ALNDA +A +
Sbjct: 32 FKAKDYENAIKFYSQAIE----LNPSNAIYYGNRSLAYLRTECYGYALNDATRAIELDKK 87
Query: 316 WHIASYLQAAALSAMG 331
+ Y +AA+ A+G
Sbjct: 88 YIKGYYRRAASNMALG 103
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 76/157 (48%), Gaps = 24/157 (15%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-- 81
L + ++ A+EY K ++ DL A L E+ +++ FGL + G +Y+ +
Sbjct: 114 LYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAG 171
Query: 82 ----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQ 132
+ +T PE L + + +S +++FG LL ++ + + P +DL + +++ +
Sbjct: 172 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDYR 230
Query: 133 M-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 168
M + C E + EL+R C Q+ P +RP+
Sbjct: 231 MERPEGCPEKVY------ELMR---ACWQWNPSDRPS 258
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 16/155 (10%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLST---FGLMKN------SRD 74
L V +A +Y + ++ D+ A L G R++ FG+ ++ R
Sbjct: 144 LHVARDIACGCQY-LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRK 202
Query: 75 GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDRNLQM 133
G + + PPE G T ++ +SFG LL ++ S ++P PS + L+
Sbjct: 203 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS----NQEVLEF 258
Query: 134 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 168
+T + G + R+ ++C Q++P +RPN
Sbjct: 259 VTSGGRMDPPKNCPGP-VYRIMTQCWQHQPEDRPN 292
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 69/166 (41%), Gaps = 24/166 (14%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA 83
L + L +A+A+E+ SKG ++ DL I F D ++ FGL+ + T L
Sbjct: 121 LHIFLQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 179
Query: 84 FTPPEYLRTGRV------TPESV----------IYSFGTLLLDLLSGKHIPPSHALDLIR 127
P TG+V +PE + I+S G +L +LL P S ++ R
Sbjct: 180 PMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL----YPFSTQME--R 233
Query: 128 DRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 173
R L + + FT E V + L P ERP +++
Sbjct: 234 VRTLTDVRNLKFPPLFTQKYPCEYV-MVQDMLSPSPMERPEAINII 278
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 74/179 (41%), Gaps = 25/179 (13%)
Query: 27 VLHLAQ----ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN- 81
+LH+AQ + Y S+ ++ DL L E+ ++ FG+ ++ Y
Sbjct: 130 MLHIAQQIAAGMVYLASQ-HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGG 188
Query: 82 -----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNL 131
+ + PPE + + T ES ++S G +L ++ + GK + + ++ I +
Sbjct: 189 HTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRV 248
Query: 132 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVL 190
+C + E+ L C Q EP R N K + T L L K + V +L
Sbjct: 249 LQRPRTCPQ---------EVYELMLGCWQREPHMRKNIKGIHTLLQNLAKASPVYLDIL 298
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 13/119 (10%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---SYSTNLAFT 85
+ A++YC K ++ DL A +L D D N +++ FG G ++ +
Sbjct: 121 QIVSAVQYCHQK-FIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYA 179
Query: 86 PPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
PE + + PE ++S G +L L+SG S D +NL+ L + L G++
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFD---GQNLKELRERVLRGKY 230
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 13/119 (10%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS---YSTNLAFT 85
+ A++YC K ++ DL A +L D D N +++ FG G + + +
Sbjct: 121 QIVSAVQYCHQK-FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYA 179
Query: 86 PPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
PE + + PE ++S G +L L+SG S D +NL+ L + L G++
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFD---GQNLKELRERVLRGKY 230
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 10/162 (6%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL---MKNSRDGKSYSTNL--A 83
L+ AL Y SK R ++ D+ A +L + +L FGL M++S K+ L
Sbjct: 119 QLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIK 177
Query: 84 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
+ PE + R T S ++ FG + ++L P +++ ++ ++
Sbjct: 178 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGERLPM 233
Query: 144 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 185
+ L L ++C Y+P RP L LS + +E ++
Sbjct: 234 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKL 275
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 79/188 (42%), Gaps = 29/188 (15%)
Query: 25 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN-----------SR 73
R+ + +AL Y S+G ++ DL I DE N ++ FGL KN S+
Sbjct: 120 RLFRQILEALSYIHSQG-IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 74 DGKSYSTNLA-------FTPPEYLR-TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL 125
+ S NL + E L TG + +YS G + +++ P S ++
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI----YPFSTGME- 233
Query: 126 IRDRNLQMLTDSCLEG--QFTDDDGTELVRLASRCLQYEPRERPNPKSLV-TALSPLQKE 182
R L+ L +E F D+ ++ + ++P +RP ++L+ + P++ +
Sbjct: 234 -RVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQ 292
Query: 183 TEVPSHVL 190
EV L
Sbjct: 293 DEVIKEAL 300
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 66/158 (41%), Gaps = 17/158 (10%)
Query: 44 LYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY-------STNLAFTPPEYLRTGRVT 96
++ L A +L D D ++ FGL K +G Y + + + PE L+ +
Sbjct: 133 IHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFY 192
Query: 97 PESVIYSFGTLLLDLLS---GKHIPPSHALDLIRDRNLQM----LTDSCLEGQFT---DD 146
S ++SFG L +LL+ P + +LI QM LT+ G+ D
Sbjct: 193 YASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDR 252
Query: 147 DGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
E+ L C + E RP ++LV L Q++ +
Sbjct: 253 CPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQEKYQ 290
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 79/188 (42%), Gaps = 29/188 (15%)
Query: 25 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN-----------SR 73
R+ + +AL Y S+G ++ DL I DE N ++ FGL KN S+
Sbjct: 120 RLFRQILEALSYIHSQG-IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 74 DGKSYSTNLA-------FTPPEYLR-TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL 125
+ S NL + E L TG + +YS G + +++ P S ++
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI----YPFSTGME- 233
Query: 126 IRDRNLQMLTDSCLEG--QFTDDDGTELVRLASRCLQYEPRERPNPKSLV-TALSPLQKE 182
R L+ L +E F D+ ++ + ++P +RP ++L+ + P++ +
Sbjct: 234 -RVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQ 292
Query: 183 TEVPSHVL 190
EV L
Sbjct: 293 DEVIKEAL 300
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 66/158 (41%), Gaps = 17/158 (10%)
Query: 44 LYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY-------STNLAFTPPEYLRTGRVT 96
++ L A +L D D ++ FGL K +G Y + + + PE L+ +
Sbjct: 134 IHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFY 193
Query: 97 PESVIYSFGTLLLDLLS---GKHIPPSHALDLIRDRNLQM----LTDSCLEGQFT---DD 146
S ++SFG L +LL+ P + +LI QM LT+ G+ D
Sbjct: 194 YASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDR 253
Query: 147 DGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
E+ L C + E RP ++LV L Q++ +
Sbjct: 254 CPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQEKYQ 291
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 80/173 (46%), Gaps = 26/173 (15%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGK 76
L + ++ A+EY K ++ DL A L E+ +++ FGL + + G
Sbjct: 119 LYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA 177
Query: 77 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNL 131
+ + +T PE L + + +S +++FG LL ++ + + P +DL + +++
Sbjct: 178 KFP--IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDY 234
Query: 132 QM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 183
+M + C E + EL+R C Q+ P +RP+ + A + +E+
Sbjct: 235 RMERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFETMFQES 278
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 66/164 (40%), Gaps = 21/164 (12%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST--- 80
+ +V +A +EY +S ++ DL +L + N ++S GL + Y
Sbjct: 148 VHLVAQIAAGMEYLSSH-HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 206
Query: 81 ---NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQ 132
+ + PE + G+ + +S I+S+G +L ++ S P +++IR+R +
Sbjct: 207 SLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVL 266
Query: 133 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 176
D C + L C P RP K + + L
Sbjct: 267 PCPDDCPAWVYA---------LMIECWNEFPSRRPRFKDIHSRL 301
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 13/119 (10%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---SYSTNLAFT 85
+ A++YC K ++ DL A +L D D N +++ FG G ++ +
Sbjct: 121 QIVSAVQYCHQK-FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYA 179
Query: 86 PPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 143
PE + + PE ++S G +L L+SG S D +NL+ L + L G++
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFD---GQNLKELRERVLRGKY 230
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 25 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA- 83
R + A+EYC + + ++ DL +L D++ N +++ FGL DG T+
Sbjct: 112 RFFQQIICAIEYC-HRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGS 170
Query: 84 --FTPPEYLRTGRV--TPESVIYSFGTLLLDLLSGK 115
+ PE + G++ PE ++S G +L +L G+
Sbjct: 171 PNYAAPEVI-NGKLYAGPEVDVWSCGIVLYVMLVGR 205
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 66/164 (40%), Gaps = 21/164 (12%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST--- 80
+ +V +A +EY +S ++ DL +L + N ++S GL + Y
Sbjct: 131 VHLVAQIAAGMEYLSSH-HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 189
Query: 81 ---NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQ 132
+ + PE + G+ + +S I+S+G +L ++ S P +++IR+R +
Sbjct: 190 SLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVL 249
Query: 133 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 176
D C + L C P RP K + + L
Sbjct: 250 PCPDDCPAWVYA---------LMIECWNEFPSRRPRFKDIHSRL 284
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 64/160 (40%), Gaps = 20/160 (12%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP- 86
L + +A+ Y S ++ D+ IL +L FGL + D Y ++ P
Sbjct: 116 LQICKAMAYLESIN-CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI 174
Query: 87 ----PEYLRTGRVTPESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDS 137
PE + R T S ++ F + ++LS GK + + ++ + D
Sbjct: 175 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDL 234
Query: 138 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 177
C +T L +RC Y+P +RP LV +LS
Sbjct: 235 CPPVLYT---------LMTRCWDYDPSDRPRFTELVCSLS 265
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 25 RVVLHLAQ---ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 77
R + + AQ LE+ + +Y DL +L D+DGN R+S GL + G K
Sbjct: 290 RAIFYTAQIVSGLEHLHQR-NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG 348
Query: 78 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK 115
Y+ F PE L ++ G L ++++ +
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 25 RVVLHLAQ---ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 77
R + + AQ LE+ + +Y DL +L D+DGN R+S GL + G K
Sbjct: 290 RAIFYTAQIVSGLEHLHQR-NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG 348
Query: 78 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK 115
Y+ F PE L ++ G L ++++ +
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 25 RVVLHLAQ---ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 77
R + + AQ LE+ + +Y DL +L D+DGN R+S GL + G K
Sbjct: 290 RAIFYTAQIVSGLEHLHQR-NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG 348
Query: 78 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK 115
Y+ F PE L ++ G L ++++ +
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 25 RVVLHLAQ---ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 77
R + + AQ LE+ + +Y DL +L D+DGN R+S GL + G K
Sbjct: 290 RAIFYTAQIVSGLEHLHQR-NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG 348
Query: 78 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK 115
Y+ F PE L ++ G L ++++ +
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-NSRDG---KSYSTNLAFT 85
+A L + SKG +Y DL ++ D +G+ +++ FG+ K N DG K + +
Sbjct: 451 IAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYI 509
Query: 86 PPEYLRTGRVTPESVIYSFGTLLLDLLSGK 115
PE + ++FG LL ++L+G+
Sbjct: 510 APEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 64/160 (40%), Gaps = 20/160 (12%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP- 86
L + +A+ Y S ++ D+ IL +L FGL + D Y ++ P
Sbjct: 120 LQICKAMAYLESIN-CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI 178
Query: 87 ----PEYLRTGRVTPESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDS 137
PE + R T S ++ F + ++LS GK + + ++ + D
Sbjct: 179 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDL 238
Query: 138 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 177
C +T L +RC Y+P +RP LV +LS
Sbjct: 239 CPPVLYT---------LMTRCWDYDPSDRPRFTELVCSLS 269
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 10/155 (6%)
Query: 28 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP- 86
L + +A+ Y S ++ D+ IL +L FGL + D Y ++ P
Sbjct: 132 LQICKAMAYLESIN-CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI 190
Query: 87 ----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ 142
PE + R T S ++ F + ++LS P + ++++ + +
Sbjct: 191 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP----FFWLENKDVIGVLEKGDRLP 246
Query: 143 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 177
D L L +RC Y+P +RP LV +LS
Sbjct: 247 KPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLS 281
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-NSRDG---KSYSTNLAFT 85
+A L + SKG +Y DL ++ D +G+ +++ FG+ K N DG K + +
Sbjct: 130 IAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYI 188
Query: 86 PPEYLRTGRVTPESVIYSFGTLLLDLLSGK 115
PE + ++FG LL ++L+G+
Sbjct: 189 APEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS-RDG---KSYSTNLAFT 85
++ AL + KG +Y DL I+ + G+ +L+ FGL K S DG ++ + +
Sbjct: 130 ISMALGHLHQKG-IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYM 188
Query: 86 PPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPP 119
PE L +S G L+ D+L+G PP
Sbjct: 189 APEILMRSGHNRAVDWWSLGALMYDMLTGA--PP 220
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 63/153 (41%), Gaps = 14/153 (9%)
Query: 25 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF 84
++ + + +ALE+ SK ++ D+ +L + G ++ FG+ D + + +
Sbjct: 157 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGC 216
Query: 85 TPPEYLRTGRVTPE---------SVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT 135
P Y+ R+ PE S I+S G +++L + S + L+ +
Sbjct: 217 KP--YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF---QQLKQVV 271
Query: 136 DSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 168
+ D E V S+CL+ +ERP
Sbjct: 272 EEPSPQLPADKFSAEFVDFTSQCLKKNSKERPT 304
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 70/163 (42%), Gaps = 14/163 (8%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-- 81
L + L + + + Y + ++ DL A L E+ ++S FG+ + D + S+
Sbjct: 106 LGMCLDVCEGMAY-LEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT 164
Query: 82 ---LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC 138
+ + PE R + +S ++SFG L+ ++ S IP + N +++ D
Sbjct: 165 KFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN------RSNSEVVEDIS 218
Query: 139 LEGQFTDDD--GTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
+ T + ++ + C + P +RP L+ L+ +
Sbjct: 219 TGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAAI 261
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
Query: 32 QALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----P 87
QAL Y ++G ++ D+ + IL DG +LS FG L TP P
Sbjct: 152 QALAYLHAQG-VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAP 210
Query: 88 EYLRTGRVTPESVIYSFGTLLLDLLSGKHIPP 119
E + E I+S G ++++++ G+ PP
Sbjct: 211 EVISRSLYATEVDIWSLGIMVIEMVDGE--PP 240
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 6/93 (6%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP--- 86
+ AL + KG +Y DL +L D +G+ +L+ FG+ K + TP
Sbjct: 133 IISALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYI 191
Query: 87 -PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 118
PE L+ P ++ G LL ++L G H P
Sbjct: 192 APEILQEMLYGPAVDWWAMGVLLYEMLCG-HAP 223
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 25 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA- 83
R+ + A++YC + ++ DL +L D N +++ FGL DG+ +
Sbjct: 115 RLFQQILSAVDYC-HRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGS 173
Query: 84 --FTPPEYLRTGRV--TPESVIYSFGTLLLDLLSG------KHIP 118
+ PE + +GR+ PE I+S G +L LL G +H+P
Sbjct: 174 PNYAAPEVI-SGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP 217
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS-RDGKSYSTNLA---FT 85
++ AL Y +G +Y DL +L D +G+ +L+ +G+ K R G + ST +
Sbjct: 162 ISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYI 220
Query: 86 PPEYLRTGRVTPESVIYSFGTLLLDLLSGK 115
PE LR ++ G L+ ++++G+
Sbjct: 221 APEILRGEDYGFSVDWWALGVLMFEMMAGR 250
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-- 81
L + L + + + Y + ++ DL A L E+ ++S FG+ + D + S+
Sbjct: 107 LGMCLDVCEGMAY-LEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT 165
Query: 82 ---LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 118
+ + PE R + +S ++SFG L+ ++ S IP
Sbjct: 166 KFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP 205
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 72/166 (43%), Gaps = 18/166 (10%)
Query: 31 AQALEYC--TSKGRA-------LYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN 81
+Q LE C +G A ++ DL A L D D ++S FG+ + D + S+
Sbjct: 104 SQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSV 163
Query: 82 -----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 136
+ ++ PE + + +S +++FG L+ ++ S +P DL + + +
Sbjct: 164 GTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMP----YDLYTNSEVVLKVS 219
Query: 137 SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 182
+ ++ C P +RP + L++++ PL+++
Sbjct: 220 QGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265
>pdb|1WAO|1 Chain 1, Pp5 Structure
pdb|1WAO|2 Chain 2, Pp5 Structure
pdb|1WAO|3 Chain 3, Pp5 Structure
pdb|1WAO|4 Chain 4, Pp5 Structure
Length = 477
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 252 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 311
K + + F+ KD ++AI+ Y+Q I+ + Y RSL YL ++ AL DA +A
Sbjct: 10 KTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIE 68
Query: 312 ISPIWHIASYLQAAALSAMG 331
+ + Y +AA+ A+G
Sbjct: 69 LDKKYIKGYYRRAASNMALG 88
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-- 81
L + L + + + Y + ++ DL A L E+ ++S FG+ + D + S+
Sbjct: 104 LGMCLDVCEGMAY-LEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT 162
Query: 82 ---LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 118
+ + PE R + +S ++SFG L+ ++ S IP
Sbjct: 163 KFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP 202
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS-RDG---KSYSTNLAFT 85
++ AL + KG +Y DL I+ + G+ +L+ FGL K S DG + + +
Sbjct: 130 ISMALGHLHQKG-IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYM 188
Query: 86 PPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPP 119
PE L +S G L+ D+L+G PP
Sbjct: 189 APEILMRSGHNRAVDWWSLGALMYDMLTGA--PP 220
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-- 81
L + L + + + Y + ++ DL A L E+ ++S FG+ + D + S+
Sbjct: 109 LGMCLDVCEGMAY-LEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT 167
Query: 82 ---LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 118
+ + PE R + +S ++SFG L+ ++ S IP
Sbjct: 168 KFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP 207
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 50/119 (42%), Gaps = 11/119 (9%)
Query: 8 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 67
+ + H E PM + V+ QAL + G ++ D+ I+ ++ FG
Sbjct: 104 RDIVHTEG-PMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFG 161
Query: 68 LMKNSRDGKSYSTNLA-------FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPP 119
+ + D + T A + PE R V S +YS G +L ++L+G+ PP
Sbjct: 162 IARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE--PP 218
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 17/105 (16%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA 83
L + + +A+A+E+ SKG ++ DL I F D ++ FGL+ + T L
Sbjct: 167 LHIFIQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225
Query: 84 FTPPEYLRTGRV------TPESV----------IYSFGTLLLDLL 112
P G+V +PE + I+S G +L +LL
Sbjct: 226 PMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 50/119 (42%), Gaps = 11/119 (9%)
Query: 8 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 67
+ + H E PM + V+ QAL + G ++ D+ I+ ++ FG
Sbjct: 104 RDIVHTEG-PMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFG 161
Query: 68 LMKNSRDGKSYSTNLA-------FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPP 119
+ + D + T A + PE R V S +YS G +L ++L+G+ PP
Sbjct: 162 IARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE--PP 218
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 25 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA- 83
R + A+EYC + + ++ DL +L DE N +++ FGL DG T+
Sbjct: 117 RFFQQIISAVEYC-HRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGS 175
Query: 84 --FTPPEYLRTGRV--TPESVIYSFGTLLLDLL 112
+ PE + +G++ PE ++S G +L +L
Sbjct: 176 PNYAAPEVI-SGKLYAGPEVDVWSCGVILYVML 207
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 43 ALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST--NLAFTPPEYLRTGRVTPESV 100
+Y DL IL DE G+ R+S GL + K +++ + PE L+ G S
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSA 372
Query: 101 -IYSFGTLLLDLLSGKHIP 118
+S G +L LL G H P
Sbjct: 373 DWFSLGCMLFKLLRG-HSP 390
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-- 81
L + L + + + Y + ++ DL A L E+ ++S FG+ + D + S+
Sbjct: 106 LGMCLDVCEGMAY-LEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT 164
Query: 82 ---LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 118
+ + PE R + +S ++SFG L+ ++ S IP
Sbjct: 165 KFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP 204
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 43 ALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST--NLAFTPPEYLRTGRVTPESV 100
+Y DL IL DE G+ R+S GL + K +++ + PE L+ G S
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSA 372
Query: 101 -IYSFGTLLLDLLSGKHIP 118
+S G +L LL G H P
Sbjct: 373 DWFSLGCMLFKLLRG-HSP 390
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 25 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA- 83
R + A+EYC + + ++ DL +L DE N +++ FGL DG T+
Sbjct: 116 RFFQQIISAVEYC-HRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGS 174
Query: 84 --FTPPEYLRTGRV--TPESVIYSFGTLLLDLL 112
+ PE + +G++ PE ++S G +L +L
Sbjct: 175 PNYAAPEVI-SGKLYAGPEVDVWSCGVILYVML 206
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 43 ALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST--NLAFTPPEYLRTGRVTPESV 100
+Y DL IL DE G+ R+S GL + K +++ + PE L+ G S
Sbjct: 312 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSA 371
Query: 101 -IYSFGTLLLDLLSGKHIP 118
+S G +L LL G H P
Sbjct: 372 DWFSLGCMLFKLLRG-HSP 389
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 43 ALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST--NLAFTPPEYLRTGRVTPESV 100
+Y DL IL DE G+ R+S GL + K +++ + PE L+ G S
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSA 372
Query: 101 -IYSFGTLLLDLLSGKHIP 118
+S G +L LL G H P
Sbjct: 373 DWFSLGCMLFKLLRG-HSP 390
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 72/169 (42%), Gaps = 18/169 (10%)
Query: 21 AMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN-SRDGKSYS 79
+ L + + + ++Y SK + ++ DL I + ++ FGL+ + DGK
Sbjct: 136 VLALELFEQITKGVDYIHSK-KLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTR 194
Query: 80 TN--LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD--RNLQMLT 135
+ L + PE + + E +Y+ G +L +LL H D + + L
Sbjct: 195 SKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL--------HVCDTAFETSKFFTDLR 246
Query: 136 DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
D + F + T L +L S+ +P +RPN ++ L+ +K E
Sbjct: 247 DGIISDIFDKKEKTLLQKLLSK----KPEDRPNTSEILRTLTVWKKSPE 291
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 67/162 (41%), Gaps = 19/162 (11%)
Query: 25 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF 84
++ L +AL + + ++ D+ IL D GN +L FG+ D + + +
Sbjct: 129 KITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGC 188
Query: 85 TPPEYLRTGRVTP---------ESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT 135
P Y+ R+ P S ++S G L +L +G+ P + + D+ Q++
Sbjct: 189 RP--YMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRF--PYPKWNSVFDQLTQVVK 244
Query: 136 DSCLEGQFTDDDGTE----LVRLASRCLQYEPRERPNPKSLV 173
Q ++ + E + + CL + +RP K L+
Sbjct: 245 GD--PPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELL 284
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 25 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA- 83
R + A+EYC + + ++ DL +L DE N +++ FGL DG T+
Sbjct: 107 RFFQQIISAVEYC-HRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGS 165
Query: 84 --FTPPEYLRTGRV--TPESVIYSFGTLLLDLL 112
+ PE + +G++ PE ++S G +L +L
Sbjct: 166 PNYAAPEVI-SGKLYAGPEVDVWSCGVILYVML 197
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 50/119 (42%), Gaps = 11/119 (9%)
Query: 8 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 67
+ + H E PM + V+ QAL + G ++ D+ I+ ++ FG
Sbjct: 104 RDIVHTEG-PMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFG 161
Query: 68 LMKNSRDGKSYSTNLA-------FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPP 119
+ + D + T A + PE R V S +YS G +L ++L+G+ PP
Sbjct: 162 IARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE--PP 218
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 25 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA- 83
R + A+EYC + + ++ DL +L DE N +++ FGL DG T+
Sbjct: 111 RFFQQIISAVEYC-HRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGS 169
Query: 84 --FTPPEYLRTGRV--TPESVIYSFGTLLLDLL 112
+ PE + +G++ PE ++S G +L +L
Sbjct: 170 PNYAAPEVI-SGKLYAGPEVDVWSCGVILYVML 201
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 50/119 (42%), Gaps = 11/119 (9%)
Query: 8 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 67
+ + H E PM + V+ QAL + G ++ D+ I+ ++ FG
Sbjct: 104 RDIVHTEG-PMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFG 161
Query: 68 LMKNSRDGKSYSTNLA-------FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPP 119
+ + D + T A + PE R V S +YS G +L ++L+G+ PP
Sbjct: 162 IARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE--PP 218
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-- 81
L + L + + + Y + ++ DL A L E+ ++S FG+ + D + S+
Sbjct: 126 LGMCLDVCEGMAY-LEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT 184
Query: 82 ---LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 118
+ + PE R + +S ++SFG L+ ++ S IP
Sbjct: 185 KFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP 224
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS-RDGKSYSTNLAF 84
+V L + L+Y S G ++ DL + +ED R+ FGL + + + Y +
Sbjct: 136 LVYQLLRGLKYIHSAG-IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWY 194
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL GK + P
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPG 231
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 11/119 (9%)
Query: 8 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 67
+ + H E PM + V+ QAL + G ++ D+ IL ++ FG
Sbjct: 104 RDIVHTEG-PMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANILISATNAVKVVDFG 161
Query: 68 LMKNSRD-GKSYSTNLA------FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPP 119
+ + D G S A + PE R V S +YS G +L ++L+G+ PP
Sbjct: 162 IARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE--PP 218
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTN-----L 82
+A ++Y + G A++ DL A IL + + ++S FGL + D +Y+T +
Sbjct: 156 IASGMKYLSDMG-AVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 113
+T PE + + T S ++S+G +L +++S
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 50/119 (42%), Gaps = 11/119 (9%)
Query: 8 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 67
+ + H E PM + V+ QAL + G ++ D+ I+ ++ FG
Sbjct: 121 RDIVHTEG-PMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFG 178
Query: 68 LMKNSRDGKSYSTNLA-------FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPP 119
+ + D + T A + PE R V S +YS G +L ++L+G+ PP
Sbjct: 179 IARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE--PP 235
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS-RDGKSYSTNLAF 84
+V L + L+Y S G ++ DL + +ED R+ FGL + + + Y +
Sbjct: 136 LVYQLLRGLKYIHSAG-IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWY 194
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL GK + P
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPG 231
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGK--SYSTNLA 83
+ ALEY KG ++ DL IL +ED + +++ FG K S+ + S+
Sbjct: 141 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 199
Query: 84 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 122
+ PE L + S +++ G ++ L++G +PP A
Sbjct: 200 YVSPELLTEKSASKSSDLWALGCIIYQLVAG--LPPFRA 236
>pdb|1A17|A Chain A, Tetratricopeptide Repeats Of Protein Phosphatase 5
Length = 166
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 259 FRQKDLKDAIECYTQFIDAGTMVSPT---VYARRSLCYLMSDMPQDALNDAMQAQIISPI 315
F+ KD ++AI+ Y+Q I+ ++P+ Y RSL YL ++ AL DA +A +
Sbjct: 24 FKAKDYENAIKFYSQAIE----LNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKK 79
Query: 316 WHIASYLQAAALSAMG 331
+ Y +AA+ A+G
Sbjct: 80 YIKGYYRRAASNMALG 95
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 69/169 (40%), Gaps = 17/169 (10%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-- 81
L + +A + Y S+ ++ DL L + ++ FG+ ++ Y
Sbjct: 136 LHIASQIASGMVYLASQ-HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGH 194
Query: 82 ----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS 137
+ + PPE + + T ES ++SFG +L ++ + P L ++ +T
Sbjct: 195 TMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP---WFQLSNTEVIECIT-- 249
Query: 138 CLEGQFTDDDGT---ELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 183
+G+ + E+ + C Q EP++R N K + L L K T
Sbjct: 250 --QGRVLERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILHALGKAT 296
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY-------STNL 82
+ + +EY S+ R ++ DL A IL + + + +++ FGL K K Y + +
Sbjct: 123 ICKGMEYLGSR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI 181
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 113
+ PE L + +S ++SFG +L +L +
Sbjct: 182 FWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 62/153 (40%), Gaps = 14/153 (9%)
Query: 25 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF 84
++ + + +ALE+ SK ++ D+ +L + G ++ FG+ D + +
Sbjct: 113 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGC 172
Query: 85 TPPEYLRTGRVTPE---------SVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT 135
P Y+ R+ PE S I+S G +++L + S + L+ +
Sbjct: 173 KP--YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF---QQLKQVV 227
Query: 136 DSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 168
+ D E V S+CL+ +ERP
Sbjct: 228 EEPSPQLPADKFSAEFVDFTSQCLKKNSKERPT 260
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY-------STNL 82
+ + +EY S+ R ++ DL A IL + + + +++ FGL K K Y + +
Sbjct: 124 ICKGMEYLGSR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI 182
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 113
+ PE L + +S ++SFG +L +L +
Sbjct: 183 FWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY-------STNL 82
+ + +EY S+ R ++ DL A IL + + + +++ FGL K K Y + +
Sbjct: 136 ICKGMEYLGSR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI 194
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 113
+ PE L + +S ++SFG +L +L +
Sbjct: 195 FWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-----NSRDGKSYSTN 81
V + ALE+ G +Y D+ IL D +G+ L+ FGL K + +
Sbjct: 165 VGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGT 223
Query: 82 LAFTPPEYLRTGRVTPESVI--YSFGTLLLDLLSG 114
+ + P+ +R G + + +S G L+ +LL+G
Sbjct: 224 IEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Query: 25 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA- 83
R+ + ++YC + ++ DL +L D N +++ FGL DG+ +
Sbjct: 120 RLFQQILSGVDYC-HRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGS 178
Query: 84 --FTPPEYLRTGRV--TPESVIYSFGTLLLDLLSG 114
+ PE + +GR+ PE I+S G +L LL G
Sbjct: 179 PNYAAPEVI-SGRLYAGPEVDIWSSGVILYALLCG 212
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 71/169 (42%), Gaps = 18/169 (10%)
Query: 21 AMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN-SRDGKSYS 79
+ L + + + ++Y SK + + DL I + ++ FGL+ + DGK
Sbjct: 122 VLALELFEQITKGVDYIHSK-KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXR 180
Query: 80 TN--LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD--RNLQMLT 135
+ L + PE + + E +Y+ G +L +LL H D + + L
Sbjct: 181 SKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL--------HVCDTAFETSKFFTDLR 232
Query: 136 DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
D + F + T L +L S+ +P +RPN ++ L+ +K E
Sbjct: 233 DGIISDIFDKKEKTLLQKLLSK----KPEDRPNTSEILRTLTVWKKSPE 277
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 68/168 (40%), Gaps = 24/168 (14%)
Query: 20 WAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL----------- 68
W+ R+ +A + Y S ++ DLN++ L E+ N ++ FGL
Sbjct: 107 WSQRVSFAKDIASGMAYLHSMN-IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165
Query: 69 -----MKNSRDGKSYST--NLAFTPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
+K K Y+ N + PE + GR E V ++SFG +L +++ + P
Sbjct: 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMI-NGRSYDEKVDVFSFGIVLCEIIGRVNADPD 224
Query: 121 HALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 168
+ L R + + L+ + + RC +P +RP+
Sbjct: 225 Y---LPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPS 269
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGK--SYSTNLA 83
+ ALEY KG ++ DL IL +ED + +++ FG K S+ + S+
Sbjct: 138 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 196
Query: 84 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 122
+ PE L S +++ G ++ L++G +PP A
Sbjct: 197 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 233
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGK--SYSTNLA 83
+ ALEY KG ++ DL IL +ED + +++ FG K S+ + S+
Sbjct: 142 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 200
Query: 84 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 122
+ PE L S +++ G ++ L++G +PP A
Sbjct: 201 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 237
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP--- 86
++ AL Y +G +Y DL +L D +G+ +L+ +G+ K ++ TP
Sbjct: 130 ISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYI 188
Query: 87 -PEYLRTGRVTPESVIYSFGTLLLDLLSGK 115
PE LR ++ G L+ ++++G+
Sbjct: 189 APEILRGEDYGFSVDWWALGVLMFEMMAGR 218
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP--- 86
++ AL Y +G +Y DL +L D +G+ +L+ +G+ K ++ TP
Sbjct: 115 ISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYI 173
Query: 87 -PEYLRTGRVTPESVIYSFGTLLLDLLSGK 115
PE LR ++ G L+ ++++G+
Sbjct: 174 APEILRGEDYGFSVDWWALGVLMFEMMAGR 203
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP--- 86
++ AL Y +G +Y DL +L D +G+ +L+ +G+ K ++ TP
Sbjct: 119 ISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYI 177
Query: 87 -PEYLRTGRVTPESVIYSFGTLLLDLLSGK 115
PE LR ++ G L+ ++++G+
Sbjct: 178 APEILRGEDYGFSVDWWALGVLMFEMMAGR 207
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 23 RLRVVLH-LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN-SRDGKSYS- 79
++++ L+ L + + +C + R L+ DL +L + DG +L+ FGL + +SY+
Sbjct: 120 QIKIYLYQLLRGVAHC-HQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTH 178
Query: 80 --TNLAFTPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
L + P+ L + SV I+S G + ++++GK + P
Sbjct: 179 EVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPG 222
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 12/93 (12%)
Query: 44 LYHDLNAYRILFDEDGNPRLSTFG-LMKNSRDGKSYSTNLAFTP----PEYLRT-----G 93
++ D+ IL D +G+ RL+ FG +K DG S+ TP PE L+ G
Sbjct: 197 VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKG 256
Query: 94 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI 126
R PE +S G + ++L G+ P +A L+
Sbjct: 257 RYGPECDWWSLGVCMYEMLYGE--TPFYAESLV 287
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 23 RLRVVLH-LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN-SRDGKSYS- 79
++++ L+ L + + +C + R L+ DL +L + DG +L+ FGL + +SY+
Sbjct: 120 QIKIYLYQLLRGVAHC-HQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTH 178
Query: 80 --TNLAFTPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
L + P+ L + SV I+S G + ++++GK + P
Sbjct: 179 EVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPG 222
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS-RDG---KSYSTNLAFT 85
+ ALEY S+ +Y D+ ++ D+DG+ +++ FGL K DG K++ +
Sbjct: 114 IVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYL 172
Query: 86 PPEYLRTGRVTPESVIYSFGTLLLDLLSGK 115
PE L + G ++ +++ G+
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS-RDG---KSYSTNLAFT 85
+ ALEY S+ +Y D+ ++ D+DG+ +++ FGL K DG K++ +
Sbjct: 117 IVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYL 175
Query: 86 PPEYLRTGRVTPESVIYSFGTLLLDLLSGK 115
PE L + G ++ +++ G+
Sbjct: 176 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 19/133 (14%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP--- 86
+A AL Y S +Y DL IL D G+ L+ FGL K + + S ++ TP
Sbjct: 148 IASALGYLHSLN-IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYL 206
Query: 87 -PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA------LDLIRDRNLQM---LTD 136
PE L + G +L ++L G +PP ++ D I ++ LQ+ +T+
Sbjct: 207 APEVLHKQPYDRTVDWWCLGAVLYEMLYG--LPPFYSRNTAEMYDNILNKPLQLKPNITN 264
Query: 137 SC---LEGQFTDD 146
S LEG D
Sbjct: 265 SARHLLEGLLQKD 277
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 73/155 (47%), Gaps = 20/155 (12%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-- 81
L + ++ A+EY K ++ DL A L E+ +++ FGL + G +Y+ +
Sbjct: 133 LYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHVVKVADFGLSR-LMTGDTYTAHAG 190
Query: 82 ----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS 137
+ +T PE L + +S +++FG LL ++ + + P +DL + +L
Sbjct: 191 AKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYDL------ 243
Query: 138 CLEGQFTDD--DGT--ELVRLASRCLQYEPRERPN 168
LE + + +G ++ L C ++ P +RP+
Sbjct: 244 -LEKGYRMEQPEGCPPKVYELMRACWKWSPADRPS 277
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS-RDG---KSYSTNLAFT 85
+ ALEY S+ +Y D+ ++ D+DG+ +++ FGL K DG K++ +
Sbjct: 114 IVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYL 172
Query: 86 PPEYLRTGRVTPESVIYSFGTLLLDLLSGK 115
PE L + G ++ +++ G+
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 35.0 bits (79), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 41 GRALYHDLNAYRILFDEDGNPRLSTFGL-MKNSRDGKSYSTNLAFTP----PEYL--RTG 93
+ ++ DL A ILF DG+ +L+ FG+ KN+R + TP PE + T
Sbjct: 127 NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETS 186
Query: 94 RVTP---ESVIYSFGTLLLDLLSGKHIPPSHALDLIR 127
+ P ++ ++S G L+++ + PP H L+ +R
Sbjct: 187 KDRPYDYKADVWSLGITLIEMAEIE--PPHHELNPMR 221
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 35.0 bits (79), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS-RDG---KSYSTNLAFT 85
+ ALEY S+ +Y D+ ++ D+DG+ +++ FGL K DG K + +
Sbjct: 119 IVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYL 177
Query: 86 PPEYLRTGRVTPESVIYSFGTLLLDLLSGK 115
PE L + G ++ +++ G+
Sbjct: 178 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 35.0 bits (79), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS-RDG---KSYSTNLAFT 85
+ ALEY S+ +Y D+ ++ D+DG+ +++ FGL K DG K + +
Sbjct: 114 IVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYL 172
Query: 86 PPEYLRTGRVTPESVIYSFGTLLLDLLSGK 115
PE L + G ++ +++ G+
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 35.0 bits (79), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGKS--YSTNLA 83
+ ALEY KG ++ DL IL +ED + +++ FG K S+ ++ +
Sbjct: 123 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 181
Query: 84 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 122
+ PE L S +++ G ++ L++G +PP A
Sbjct: 182 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 218
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 35.0 bits (79), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGK--SYSTNLA 83
+ ALEY KG ++ DL IL +ED + +++ FG K S+ + ++
Sbjct: 139 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQ 197
Query: 84 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 122
+ PE L S +++ G ++ L++G +PP A
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 234
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 35.0 bits (79), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGKS--YSTNLA 83
+ ALEY KG ++ DL IL +ED + +++ FG K S+ ++ +
Sbjct: 139 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 84 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 122
+ PE L S +++ G ++ L++G +PP A
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 234
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 35.0 bits (79), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGKS--YSTNLA 83
+ ALEY KG ++ DL IL +ED + +++ FG K S+ ++ +
Sbjct: 118 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 176
Query: 84 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 122
+ PE L S +++ G ++ L++G +PP A
Sbjct: 177 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 213
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 35.0 bits (79), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGKS--YSTNLA 83
+ ALEY KG ++ DL IL +ED + +++ FG K S+ ++ +
Sbjct: 117 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 175
Query: 84 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 122
+ PE L S +++ G ++ L++G +PP A
Sbjct: 176 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 212
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGKS--YSTNLA 83
+ ALEY KG ++ DL IL +ED + +++ FG K S+ ++ +
Sbjct: 141 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 84 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 122
+ PE L S +++ G ++ L++G +PP A
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 236
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGKS--YSTNLA 83
+ ALEY KG ++ DL IL +ED + +++ FG K S+ ++ +
Sbjct: 146 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 204
Query: 84 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 122
+ PE L S +++ G ++ L++G +PP A
Sbjct: 205 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 241
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGKS--YSTNLA 83
+ ALEY KG ++ DL IL +ED + +++ FG K S+ ++ +
Sbjct: 139 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 84 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 122
+ PE L S +++ G ++ L++G +PP A
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 234
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 35.0 bits (79), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGKS--YSTNLA 83
+ ALEY KG ++ DL IL +ED + +++ FG K S+ ++ +
Sbjct: 119 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 177
Query: 84 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 122
+ PE L S +++ G ++ L++G +PP A
Sbjct: 178 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 214
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 35.0 bits (79), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGKS--YSTNLA 83
+ ALEY KG ++ DL IL +ED + +++ FG K S+ ++ +
Sbjct: 141 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 84 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 122
+ PE L S +++ G ++ L++G +PP A
Sbjct: 200 YVSPELLTEKSAXKSSDLWALGCIIYQLVAG--LPPFRA 236
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 35.0 bits (79), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGKS--YSTNLA 83
+ ALEY KG ++ DL IL +ED + +++ FG K S+ ++ +
Sbjct: 139 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 84 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 122
+ PE L S +++ G ++ L++G +PP A
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 234
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 35.0 bits (79), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGKS--YSTNLA 83
+ ALEY KG ++ DL IL +ED + +++ FG K S+ ++ +
Sbjct: 141 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 84 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 122
+ PE L S +++ G ++ L++G +PP A
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 236
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 35.0 bits (79), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGKS--YSTNLA 83
+ ALEY KG ++ DL IL +ED + +++ FG K S+ ++ +
Sbjct: 138 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 196
Query: 84 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 122
+ PE L S +++ G ++ L++G +PP A
Sbjct: 197 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 233
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 35.0 bits (79), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGKS--YSTNLA 83
+ ALEY KG ++ DL IL +ED + +++ FG K S+ ++ +
Sbjct: 141 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 84 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 122
+ PE L S +++ G ++ L++G +PP A
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 236
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 35.0 bits (79), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGKS--YSTNLA 83
+ ALEY KG ++ DL IL +ED + +++ FG K S+ ++ +
Sbjct: 116 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 174
Query: 84 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 122
+ PE L S +++ G ++ L++G +PP A
Sbjct: 175 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 211
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 35.0 bits (79), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGKS--YSTNLA 83
+ ALEY KG ++ DL IL +ED + +++ FG K S+ ++ +
Sbjct: 142 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 200
Query: 84 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 122
+ PE L S +++ G ++ L++G +PP A
Sbjct: 201 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 237
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 34.7 bits (78), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGKS--YSTNLA 83
+ ALEY KG ++ DL IL +ED + +++ FG K S+ ++ +
Sbjct: 141 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 84 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 122
+ PE L S +++ G ++ L++G +PP A
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 236
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 34.7 bits (78), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGKS--YSTNLA 83
+ ALEY KG ++ DL IL +ED + +++ FG K S+ ++ +
Sbjct: 144 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 202
Query: 84 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 122
+ PE L S +++ G ++ L++G +PP A
Sbjct: 203 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 239
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 12/93 (12%)
Query: 44 LYHDLNAYRILFDEDGNPRLSTFG-LMKNSRDGKSYSTNLAFTP----PEYLRT-----G 93
++ D+ +L D +G+ RL+ FG +K + DG S+ TP PE L+ G
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 256
Query: 94 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI 126
+ PE +S G + ++L G+ P +A L+
Sbjct: 257 KYGPECDWWSLGVCMYEMLYGE--TPFYAESLV 287
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 34.7 bits (78), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTN-----L 82
+A ++Y + G ++ DL A IL + + ++S FGL + D +Y+T +
Sbjct: 127 IASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 185
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 113
+T PE + + T S ++S+G +L +++S
Sbjct: 186 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 34.7 bits (78), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 66/155 (42%), Gaps = 10/155 (6%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------L 82
+A+ +E+ K ++ DL A +L ++ FGL ++ +Y +
Sbjct: 180 QVAKGMEFLEFKS-CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPV 238
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ 142
+ PE L G T +S ++S+G LL ++ S + P + + D N L + +
Sbjct: 239 KWMAPESLFEGIYTIKSDVWSYGILLWEIFS-LGVNPYPGIPV--DANFYKLIQNGFKMD 295
Query: 143 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 177
E+ + C ++ R+RP+ +L + L
Sbjct: 296 QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 330
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 34.7 bits (78), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTN-----L 82
+A ++Y + G ++ DL A IL + + ++S FGL + D +Y+T +
Sbjct: 127 IASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 185
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 113
+T PE + + T S ++S+G +L +++S
Sbjct: 186 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 34.7 bits (78), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS-RDG---KSYSTNLAFT 85
+ ALEY S+ +Y D+ ++ D+DG+ +++ FGL K DG K + +
Sbjct: 114 IVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYL 172
Query: 86 PPEYLRTGRVTPESVIYSFGTLLLDLLSGK 115
PE L + G ++ +++ G+
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 34.7 bits (78), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS-RDG---KSYSTNLAFT 85
+ ALEY S+ +Y D+ ++ D+DG+ +++ FGL K DG K + +
Sbjct: 114 IVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYL 172
Query: 86 PPEYLRTGRVTPESVIYSFGTLLLDLLSGK 115
PE L + G ++ +++ G+
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 34.7 bits (78), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTN-----L 82
+A ++Y + G ++ DL A IL + + ++S FGL + D +Y+T +
Sbjct: 144 IASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 202
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 113
+T PE + + T S ++S+G +L +++S
Sbjct: 203 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 34.7 bits (78), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTN-----L 82
+A ++Y + G ++ DL A IL + + ++S FGL + D +Y+T +
Sbjct: 156 IASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPI 214
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 113
+T PE + + T S ++S+G +L +++S
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 34.7 bits (78), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 12/93 (12%)
Query: 44 LYHDLNAYRILFDEDGNPRLSTFG-LMKNSRDGKSYSTNLAFTP----PEYLRT-----G 93
++ D+ +L D +G+ RL+ FG +K + DG S+ TP PE L+ G
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 272
Query: 94 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI 126
+ PE +S G + ++L G+ P +A L+
Sbjct: 273 KYGPECDWWSLGVCMYEMLYGE--TPFYAESLV 303
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 34.7 bits (78), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 58/139 (41%), Gaps = 25/139 (17%)
Query: 44 LYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGR----- 94
++ DL IL D++ RLS FG + G+ L TP PE L+
Sbjct: 222 VHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR-ELCGTPGYLAPEILKCSMDETHP 280
Query: 95 -VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT------DDD 147
E +++ G +L LL+G PP R + ML +EGQ+ DD
Sbjct: 281 GYGKEVDLWACGVILFTLLAGS--PP-----FWHRRQILMLR-MIMEGQYQFSSPEWDDR 332
Query: 148 GTELVRLASRCLQYEPRER 166
+ + L SR LQ +P R
Sbjct: 333 SSTVKDLISRLLQVDPEAR 351
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 34.3 bits (77), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 12/157 (7%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTN-----L 82
+A ++Y + G ++ DL A IL + + ++S FGL + D +Y+T +
Sbjct: 154 IASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 212
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ 142
+T PE + + T S ++S+G +L +++S P + ++++ D
Sbjct: 213 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVDEGYRLP 268
Query: 143 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
D L +L C Q + RP + +V+ L L
Sbjct: 269 PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 305
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTN-----L 82
+A ++Y + G ++ DL A IL + + ++S FGL + D +Y+T +
Sbjct: 156 IASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 113
+T PE + + T S ++S+G +L +++S
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTN-----L 82
+A ++Y + G ++ DL A IL + + ++S FGL + D +Y+T +
Sbjct: 156 IASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 113
+T PE + + T S ++S+G +L +++S
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTN-----L 82
+A ++Y + G ++ DL A IL + + ++S FGL + D +Y+T +
Sbjct: 156 IASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 113
+T PE + + T S ++S+G +L +++S
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTN-----L 82
+A ++Y + G ++ DL A IL + + ++S FGL + D +Y+T +
Sbjct: 156 IASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 113
+T PE + + T S ++S+G +L +++S
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTN-----L 82
+A ++Y + G ++ DL A IL + + ++S FGL + D +Y+T +
Sbjct: 156 IASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 113
+T PE + + T S ++S+G +L +++S
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTN-----L 82
+A ++Y + G ++ DL A IL + + ++S FGL + D +Y+T +
Sbjct: 156 IASGMKYLSDMG-FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 113
+T PE + + T S ++S+G +L +++S
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTN-----L 82
+A ++Y + G ++ DL A IL + + ++S FGL + D +Y+T +
Sbjct: 156 IASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPI 214
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 113
+T PE + + T S ++S+G +L +++S
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 11/96 (11%)
Query: 41 GRALYHDLNAYRILFDEDGNPRLSTFGL-MKNSRDGK---SYSTNLAFTPPEYL--RTGR 94
+ ++ DL A ILF DG+ +L+ FG+ KN+R + S+ + PE + T +
Sbjct: 154 NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSK 213
Query: 95 VTP---ESVIYSFGTLLLDLLSGKHIPPSHALDLIR 127
P ++ ++S G L+++ + PP H L+ +R
Sbjct: 214 DRPYDYKADVWSLGITLIEMAEIE--PPHHELNPMR 247
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 69/160 (43%), Gaps = 18/160 (11%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS--YSTN-----L 82
+A + Y G ++ DL A IL + + ++S FGL + D Y+T +
Sbjct: 154 IAAGMRYLADMG-YVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPV 212
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ 142
+T PE ++ + T S ++S+G ++ +++S P D + Q + + EG
Sbjct: 213 RWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP-------YWDMSNQDVIKAIEEGY 265
Query: 143 FTD---DDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 179
D L +L C Q E ERP + +V L +
Sbjct: 266 RLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGILDKM 305
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 11/96 (11%)
Query: 41 GRALYHDLNAYRILFDEDGNPRLSTFGL-MKNSRDGK---SYSTNLAFTPPEYL--RTGR 94
+ ++ DL A ILF DG+ +L+ FG+ KN+R + S+ + PE + T +
Sbjct: 154 NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSK 213
Query: 95 VTP---ESVIYSFGTLLLDLLSGKHIPPSHALDLIR 127
P ++ ++S G L+++ + PP H L+ +R
Sbjct: 214 DRPYDYKADVWSLGITLIEMAEIE--PPHHELNPMR 247
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Query: 29 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY-------STN 81
+ + +EY S+ R ++ DL A IL + + + +++ FGL K K +
Sbjct: 119 QICKGMEYLGSR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSP 177
Query: 82 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 113
+ + PE L + +S ++SFG +L +L +
Sbjct: 178 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 59/139 (42%), Gaps = 15/139 (10%)
Query: 42 RALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTP 97
+ L+ D+ + I +DG +L FG+ + + TP PE
Sbjct: 145 KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNN 204
Query: 98 ESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF---TDDDGTELVRL 154
+S I++ G +L +L + K HA + +NL + + G F + +L L
Sbjct: 205 KSDIWALGCVLYELCTLK-----HAFEAGSMKNLVL---KIISGSFPPVSLHYSYDLRSL 256
Query: 155 ASRCLQYEPRERPNPKSLV 173
S+ + PR+RP+ S++
Sbjct: 257 VSQLFKRNPRDRPSVNSIL 275
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 77/191 (40%), Gaps = 29/191 (15%)
Query: 25 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN-----------SR 73
R+ + +AL Y S+G ++ +L I DE N ++ FGL KN S+
Sbjct: 120 RLFRQILEALSYIHSQG-IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 74 DGKSYSTNLA-------FTPPEYLR-TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL 125
+ S NL + E L TG + YS G + + + P S +
Sbjct: 179 NLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI----YPFSTGXE- 233
Query: 126 IRDRNLQMLTDSCLEG--QFTDDDGTELVRLASRCLQYEPRERPNPKSLV-TALSPLQKE 182
R L+ L +E F D+ ++ + ++P +RP ++L+ + P++ +
Sbjct: 234 -RVNILKKLRSVSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQ 292
Query: 183 TEVPSHVLMGI 193
EV L +
Sbjct: 293 DEVIKEALKSL 303
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 65/143 (45%), Gaps = 11/143 (7%)
Query: 44 LYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTN-----LAFTPPEYLRTGRVT 96
++ DL A IL + + ++S FGL + D +Y+T+ + +T PE + + T
Sbjct: 169 VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFT 228
Query: 97 PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 156
S ++SFG ++ ++++ P +L ++ + D D + + +L
Sbjct: 229 SASDVWSFGIVMWEVMTYGERP---YWELSNHEVMKAINDG-FRLPTPMDCPSAIYQLMM 284
Query: 157 RCLQYEPRERPNPKSLVTALSPL 179
+C Q E RP +V+ L L
Sbjct: 285 QCWQQERARRPKFADIVSILDKL 307
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 41 GRALYHDLNAYRILFDEDGNPRLSTFGL-MKNSRDGKSYSTNLA---FTPPEYL--RTGR 94
+ ++ DL A ILF DG+ +L+ FG+ KN+R + + + PE + T +
Sbjct: 154 NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSK 213
Query: 95 VTP---ESVIYSFGTLLLDLLSGKHIPPSHALDLIR 127
P ++ ++S G L+++ + PP H L+ +R
Sbjct: 214 DRPYDYKADVWSLGITLIEMAEIE--PPHHELNPMR 247
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 51/121 (42%), Gaps = 12/121 (9%)
Query: 5 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLS 64
T A+ L P+ + ++ + + +AL Y K ++ D+ IL DE G +L
Sbjct: 108 TCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLC 167
Query: 65 TFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTP----------ESVIYSFGTLLLDLLSG 114
FG+ D K+ + Y+ R+ P + ++S G L++L +G
Sbjct: 168 DFGISGRLVDDKAKDRSAGCA--AYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATG 225
Query: 115 K 115
+
Sbjct: 226 Q 226
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 15/128 (11%)
Query: 25 RVVLHLAQALEYCTSKGRALYHDLNAYRILF---DEDGNPRLSTFGLMKNSRDGKSYSTN 81
R++ + A++Y G ++ DL +L+ DED +S FGL K G ST
Sbjct: 120 RLIFQVLDAVKYLHDLG-IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA 178
Query: 82 L---AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC 138
+ PE L + +S G + LL G PP + D N L +
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG--YPPFY------DENDAKLFEQI 230
Query: 139 LEGQFTDD 146
L+ ++ D
Sbjct: 231 LKAEYEFD 238
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 15/128 (11%)
Query: 25 RVVLHLAQALEYCTSKGRALYHDLNAYRILF---DEDGNPRLSTFGLMKNSRDGKSYSTN 81
R++ + A++Y G ++ DL +L+ DED +S FGL K G ST
Sbjct: 120 RLIFQVLDAVKYLHDLG-IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA 178
Query: 82 L---AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC 138
+ PE L + +S G + LL G PP + D N L +
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG--YPPFY------DENDAKLFEQI 230
Query: 139 LEGQFTDD 146
L+ ++ D
Sbjct: 231 LKAEYEFD 238
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 65/152 (42%), Gaps = 15/152 (9%)
Query: 25 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF 84
+ + L ALE+ S+ R ++ D+ + G +L GL + + + +L
Sbjct: 140 KYFVQLCSALEHMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVG 198
Query: 85 TP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE 140
TP PE + +S I+S G LL ++ + + P + + NL L +
Sbjct: 199 TPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQS--PFYGDKM----NLYSLCKKIEQ 252
Query: 141 GQF----TDDDGTELVRLASRCLQYEPRERPN 168
+ +D EL +L + C+ +P +RP+
Sbjct: 253 CDYPPLPSDHYSEELRQLVNMCINPDPEKRPD 284
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNP-RLSTFGLMKNSRDGKSYSTNLA-- 83
+ L +AL+YC S+G ++ D+ + ++ D + RL +GL + GK Y+ +A
Sbjct: 131 IYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 84 -FTPPEYL 90
F PE L
Sbjct: 190 YFKGPELL 197
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNP-RLSTFGLMKNSRDGKSYSTNLA-- 83
+ L +AL+YC S+G ++ D+ + ++ D + RL +GL + GK Y+ +A
Sbjct: 131 IYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 84 -FTPPEYL 90
F PE L
Sbjct: 190 YFKGPELL 197
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNP-RLSTFGLMKNSRDGKSYSTNLA-- 83
+ L +AL+YC S+G ++ D+ + ++ D + RL +GL + GK Y+ +A
Sbjct: 152 IYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 210
Query: 84 -FTPPEYL 90
F PE L
Sbjct: 211 YFKGPELL 218
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNP-RLSTFGLMKNSRDGKSYSTNLA-- 83
+ L +AL+YC S+G ++ D+ + ++ D + RL +GL + GK Y+ +A
Sbjct: 132 IYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 190
Query: 84 -FTPPEYL 90
F PE L
Sbjct: 191 YFKGPELL 198
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 15/128 (11%)
Query: 25 RVVLHLAQALEYCTSKGRALYHDLNAYRILF---DEDGNPRLSTFGLMKNSRDGKSYSTN 81
R++ + A++Y G ++ DL +L+ DED +S FGL K G ST
Sbjct: 120 RLIFQVLDAVKYLHDLG-IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA 178
Query: 82 L---AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC 138
+ PE L + +S G + LL G PP + D N L +
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG--YPPFY------DENDAKLFEQI 230
Query: 139 LEGQFTDD 146
L+ ++ D
Sbjct: 231 LKAEYEFD 238
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNP-RLSTFGLMKNSRDGKSYSTNLA-- 83
+ L +AL+YC S+G ++ D+ + ++ D + RL +GL + GK Y+ +A
Sbjct: 132 IYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 190
Query: 84 -FTPPEYL 90
F PE L
Sbjct: 191 YFKGPELL 198
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNP-RLSTFGLMKNSRDGKSYSTNLA-- 83
+ L +AL+YC S+G ++ D+ + ++ D + RL +GL + GK Y+ +A
Sbjct: 131 IYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 84 -FTPPEYL 90
F PE L
Sbjct: 190 YFKGPELL 197
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNP-RLSTFGLMKNSRDGKSYSTNLA-- 83
+ L +AL+YC S+G ++ D+ + ++ D + RL +GL + GK Y+ +A
Sbjct: 133 IYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 191
Query: 84 -FTPPEYL 90
F PE L
Sbjct: 192 YFKGPELL 199
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNP-RLSTFGLMKNSRDGKSYSTNLA-- 83
+ L +AL+YC S+G ++ D+ + ++ D + RL +GL + GK Y+ +A
Sbjct: 131 IYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 84 -FTPPEYL 90
F PE L
Sbjct: 190 YFKGPELL 197
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNP-RLSTFGLMKNSRDGKSYSTNLA-- 83
+ L +AL+YC S+G ++ D+ + ++ D + RL +GL + GK Y+ +A
Sbjct: 131 IYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 84 -FTPPEYL 90
F PE L
Sbjct: 190 YFKGPELL 197
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 15/128 (11%)
Query: 25 RVVLHLAQALEYCTSKGRALYHDLNAYRILF---DEDGNPRLSTFGLMKNSRDGKSYSTN 81
R++ + A++Y G ++ DL +L+ DED +S FGL K G ST
Sbjct: 120 RLIFQVLDAVKYLHDLG-IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA 178
Query: 82 L---AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC 138
+ PE L + +S G + LL G PP + D N L +
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG--YPPFY------DENDAKLFEQI 230
Query: 139 LEGQFTDD 146
L+ ++ D
Sbjct: 231 LKAEYEFD 238
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 27 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNP-RLSTFGLMKNSRDGKSYSTNLA-- 83
+ L +AL+YC S+G ++ D+ + ++ D + RL +GL + GK Y+ +A
Sbjct: 131 IYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 84 -FTPPEYL 90
F PE L
Sbjct: 190 YFKGPELL 197
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 7/83 (8%)
Query: 42 RALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLR----TGRVTP 97
R ++ D+ IL D + ++ FG+ K + TN +Y G T
Sbjct: 131 RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATD 190
Query: 98 ESV-IYSFGTLLLDLLSGKHIPP 119
E IYS G +L ++L G+ PP
Sbjct: 191 ECTDIYSIGIVLYEMLVGE--PP 211
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 59/153 (38%), Gaps = 14/153 (9%)
Query: 25 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF 84
++ + + +ALE+ SK ++ D+ +L + G + FG+ D + +
Sbjct: 140 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGC 199
Query: 85 TPPEYLRTGRVTPE---------SVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT 135
P Y R+ PE S I+S G ++L + S + L+ +
Sbjct: 200 KP--YXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPF---QQLKQVV 254
Query: 136 DSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 168
+ D E V S+CL+ +ERP
Sbjct: 255 EEPSPQLPADKFSAEFVDFTSQCLKKNSKERPT 287
>pdb|3U4T|A Chain A, Crystal Structure Of The C-Terminal Part Of The Tpr
Repeat-Containing Protein Q11ti6_cyth3 From Cytophaga
Hutchinsonii. Northeast Structural Genomics Consortium
Target Chr11b.
pdb|3U4T|B Chain B, Crystal Structure Of The C-Terminal Part Of The Tpr
Repeat-Containing Protein Q11ti6_cyth3 From Cytophaga
Hutchinsonii. Northeast Structural Genomics Consortium
Target Chr11b
Length = 272
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 255 GDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCY 293
D F+ + +AIE + + ++A SP +Y RR++CY
Sbjct: 10 ADFLFKNNNYAEAIEVFNK-LEAKKYNSPYIYNRRAVCY 47
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Query: 40 KGRALYHDLNAYRILFDEDGNPRLSTFGL-MKNSRDGKSYSTNLAFTP----PEYLRTGR 94
+ R ++ DL + +ED ++ FGL K DG+ T L TP PE L
Sbjct: 135 RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKG 193
Query: 95 VTPESVIYSFGTLLLDLLSGKHIPP 119
+ E ++S G ++ LL GK PP
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGK--PP 216
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Query: 40 KGRALYHDLNAYRILFDEDGNPRLSTFGL-MKNSRDGKSYSTNLAFTP----PEYLRTGR 94
+ R ++ DL + +ED ++ FGL K DG+ T L TP PE L
Sbjct: 139 RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKG 197
Query: 95 VTPESVIYSFGTLLLDLLSGKHIPP 119
+ E ++S G ++ LL GK PP
Sbjct: 198 HSFEVDVWSIGCIMYTLLVGK--PP 220
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 32.0 bits (71), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 132 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWY 190
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 227
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 32.0 bits (71), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Query: 40 KGRALYHDLNAYRILFDEDGNPRLSTFGL-MKNSRDGKSYSTNLAFTP----PEYLRTGR 94
+ R ++ DL + +ED ++ FGL K DG+ T L TP PE L
Sbjct: 135 RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKG 193
Query: 95 VTPESVIYSFGTLLLDLLSGKHIPP 119
+ E ++S G ++ LL GK PP
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGK--PP 216
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 22/159 (13%)
Query: 44 LYHDLNAYRILFDEDGNPRLSTFGLMKN------SRDGKSYSTNLAFTPPEYLRTGRVTP 97
++ DL L + ++ FG+ ++ R G + + PPE + + T
Sbjct: 157 VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTT 216
Query: 98 ESVIYSFGTLLLDLLS-GK----HIPPSHALDLI-RDRNLQMLTDSCLEGQFTDDDGTEL 151
ES ++SFG +L ++ + GK + + A+D I + R L+ +C E+
Sbjct: 217 ESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELER-PRAC---------PPEV 266
Query: 152 VRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVL 190
+ C Q EP++R + K + L L + V VL
Sbjct: 267 YAIMRGCWQREPQQRHSIKDVHARLQALAQAPPVYLDVL 305
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 76/186 (40%), Gaps = 23/186 (12%)
Query: 17 PMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN----- 71
P+ L V +A + Y ++ DL L + ++ FG+ ++
Sbjct: 154 PLGLGQLLAVASQVAAGMVYLAGL-HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD 212
Query: 72 -SRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GK----HIPPSHALDL 125
R G + + PPE + + T ES ++SFG +L ++ + GK + + A+D
Sbjct: 213 YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDC 272
Query: 126 I-RDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 184
I + R L+ +C E+ + C Q EP++R + K + L L +
Sbjct: 273 ITQGRELER-PRAC---------PPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPP 322
Query: 185 VPSHVL 190
V VL
Sbjct: 323 VYLDVL 328
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTN-----L 82
++ ++Y + G ++ DL A IL + + ++S FGL + D +Y+T +
Sbjct: 133 ISAGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 191
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 113
+T PE + + T S ++S+G ++ +++S
Sbjct: 192 RWTAPEAIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 130 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 188
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 189 RAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 136 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWY 194
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 231
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 22/159 (13%)
Query: 44 LYHDLNAYRILFDEDGNPRLSTFGLMKN------SRDGKSYSTNLAFTPPEYLRTGRVTP 97
++ DL L + ++ FG+ ++ R G + + PPE + + T
Sbjct: 151 VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTT 210
Query: 98 ESVIYSFGTLLLDLLS-GK----HIPPSHALDLI-RDRNLQMLTDSCLEGQFTDDDGTEL 151
ES ++SFG +L ++ + GK + + A+D I + R L+ +C E+
Sbjct: 211 ESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELER-PRAC---------PPEV 260
Query: 152 VRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVL 190
+ C Q EP++R + K + L L + V VL
Sbjct: 261 YAIMRGCWQREPQQRHSIKDVHARLQALAQAPPVYLDVL 299
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 130 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATRWY 188
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 31.6 bits (70), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 32 QALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN-SRDGKSYSTNLA---FTPP 87
Q LEY + L+ DL +L DE+G +L+ FGL K+ ++Y + + P
Sbjct: 123 QGLEYL-HQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAP 181
Query: 88 EYLRTGRVTPESV-IYSFGTLLLDLL 112
E L R+ V +++ G +L +LL
Sbjct: 182 ELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 31.6 bits (70), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 141 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWY 199
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 236
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 43 ALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTN-----LAFTPPEYLRTGRV 95
A++ DL A IL + + ++S FG+ + D +Y+T + +T PE + +
Sbjct: 152 AVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 211
Query: 96 TPESVIYSFGTLLLDLLS 113
T S ++S+G ++ +++S
Sbjct: 212 TSASDVWSYGIVMWEVMS 229
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 31.6 bits (70), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 137 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWY 195
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPP 119
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 31.6 bits (70), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 55/125 (44%), Gaps = 17/125 (13%)
Query: 1 MPNETLAKHLFHWETHPMKWA--MRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 58
MP L + +++ P KWA VVL AL+ S G ++ D+ +L D+
Sbjct: 157 MPGGDLVNLMSNYDV-PEKWAKFYTAEVVL----ALDAIHSMG-LIHRDVKPDNMLLDKH 210
Query: 59 GNPRLSTFG-LMKNSRDGKSYSTNLAFTP----PEYLRT----GRVTPESVIYSFGTLLL 109
G+ +L+ FG MK G + TP PE L++ G E +S G L
Sbjct: 211 GHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLF 270
Query: 110 DLLSG 114
++L G
Sbjct: 271 EMLVG 275
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 31.6 bits (70), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 135 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWY 193
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 230
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 31.6 bits (70), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 137 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWY 195
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 232
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 31.6 bits (70), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 136 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 194
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 231
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 31.6 bits (70), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 141 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 199
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 236
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 31.6 bits (70), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 135 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWY 193
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 230
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 31.6 bits (70), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 130 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWY 188
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 31.2 bits (69), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 136 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 194
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 231
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 31.2 bits (69), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 137 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWY 195
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 232
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 130 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 188
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 130 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 188
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 130 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 188
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 140 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 198
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 199 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 235
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 137 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 195
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 232
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 31.2 bits (69), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 136 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 194
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 231
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 31.2 bits (69), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 74/174 (42%), Gaps = 31/174 (17%)
Query: 27 VLHLAQALEYCTSKGRAL-----------YHDLNAYRILFDEDGNPRLSTFGL-MKNSRD 74
V+ +QA+++ R + H LN+ ++ DED R+S +
Sbjct: 107 VVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSP 166
Query: 75 GKSYSTNLAFTPPEYLR-----TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR 129
G+ Y+ A+ PE L+ T R + + ++SF LL +L++ + +P DL
Sbjct: 167 GRMYAP--AWVAPEALQKKPEDTNRRSAD--MWSFAVLLWELVT-REVP---FADL---S 215
Query: 130 NLQMLTDSCLEG---QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 180
N+++ LEG + +L C+ +P +RP +V L +Q
Sbjct: 216 NMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 142 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 200
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 237
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 130 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 188
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 142 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 200
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 237
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 130 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 188
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 130 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 188
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 132 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 190
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 227
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 142 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 200
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 237
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 31.2 bits (69), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFD-EDGNPRLSTFGLMKNSRDGKSYSTNLA---FT 85
L +AL+YC SKG ++ D+ + ++ D + RL +GL + + Y+ +A F
Sbjct: 141 LLKALDYCHSKG-IMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFK 199
Query: 86 PPEYLRTGRVTPESV-IYSFGTLLLDLL 112
PE L ++ S+ ++S G +L ++
Sbjct: 200 GPELLVDYQMYDYSLDMWSLGCMLASMI 227
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 31.2 bits (69), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 132 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 190
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 227
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 31.2 bits (69), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 135 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 193
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 230
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 31.2 bits (69), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 129 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 187
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 188 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 224
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 31.2 bits (69), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 130 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 188
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 31.2 bits (69), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 132 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 190
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 227
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 31.2 bits (69), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFD-EDGNPRLSTFGLMKNSRDGKSYSTNLA---FT 85
L +AL+YC SKG ++ D+ + ++ D + RL +GL + + Y+ +A F
Sbjct: 146 LLKALDYCHSKG-IMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFK 204
Query: 86 PPEYLRTGRVTPESV-IYSFGTLLLDLL 112
PE L ++ S+ ++S G +L ++
Sbjct: 205 GPELLVDYQMYDYSLDMWSLGCMLASMI 232
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 31.2 bits (69), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 153 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 211
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 212 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 248
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 31.2 bits (69), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 9/79 (11%)
Query: 44 LYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS---YSTNLA------FTPPEYLRTGR 94
++ DL A IL + + ++S FGL + D S Y++ L +T PE ++ +
Sbjct: 157 VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRK 216
Query: 95 VTPESVIYSFGTLLLDLLS 113
T S ++S+G ++ +++S
Sbjct: 217 FTSASDVWSYGIVMWEVMS 235
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 31.2 bits (69), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 135 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 193
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 230
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 31.2 bits (69), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 150 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 208
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 245
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 31.2 bits (69), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 130 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 188
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 31.2 bits (69), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 149 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 207
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 244
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 31.2 bits (69), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 126 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 184
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 221
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 31.2 bits (69), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 127 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 185
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 222
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 31.2 bits (69), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 44 LYHDLNAYRILFDEDGNPRLSTFGLMK-NSRDG---KSYSTNLAFTPPEYLRTGRVTPES 99
+Y DL ++ D +G+ +++ FG+ K + DG + + + PE +
Sbjct: 142 IYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSV 201
Query: 100 VIYSFGTLLLDLLSGKHIPPSHALD 124
+++G LL ++L+G+ PP D
Sbjct: 202 DWWAYGVLLYEMLAGQ--PPFDGED 224
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 31.2 bits (69), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 130 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 188
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 31.2 bits (69), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 126 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 184
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 221
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 31.2 bits (69), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 149 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 207
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 244
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 31.2 bits (69), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 150 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 208
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 245
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 9/78 (11%)
Query: 25 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG------LMKNSRDGKSY 78
RV+ L L Y + + L+ D+ A +L DG +L+ FG L KNS+ +
Sbjct: 129 RVMQMLLNGLYY-IHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 79 S--TNLAFTPPEYLRTGR 94
+ L + PPE L R
Sbjct: 188 NRVVTLWYRPPELLLGER 205
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 126 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 184
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 221
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 127 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 185
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 222
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D Y +
Sbjct: 153 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATRWY 211
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 212 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 248
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 128 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 186
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 223
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Query: 25 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG------LMKNSRDGKSY 78
RV+ L L Y + + L+ D+ A +L DG +L+ FG L KNS+ +
Sbjct: 128 RVMQMLLNGLYY-IHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 186
Query: 79 S--TNLAFTPPEYL 90
+ L + PPE L
Sbjct: 187 NRVVTLWYRPPELL 200
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 9/78 (11%)
Query: 25 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG------LMKNSRDGKSY 78
RV+ L L Y + + L+ D+ A +L DG +L+ FG L KNS+ +
Sbjct: 129 RVMQMLLNGLYY-IHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 79 S--TNLAFTPPEYLRTGR 94
+ L + PPE L R
Sbjct: 188 NRVVTLWYRPPELLLGER 205
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 19/137 (13%)
Query: 1 MPNETLAKHLFHWETHPMKWA--MRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 58
MP L + +++ P KWA VVL AL+ S G ++ D+ +L D+
Sbjct: 156 MPGGDLVNLMSNYDV-PEKWARFYTAEVVL----ALDAIHSMG-FIHRDVKPDNMLLDKS 209
Query: 59 GNPRLSTFG-LMKNSRDGKSYSTNLAFTP----PEYLRT----GRVTPESVIYSFGTLLL 109
G+ +L+ FG MK +++G TP PE L++ G E +S G L
Sbjct: 210 GHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLY 269
Query: 110 DLLSGKHIPPSHALDLI 126
++L G P +A L+
Sbjct: 270 EMLVGD--TPFYADSLV 284
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 62 RLSTFGLMKN-SRDGK-SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK 115
+++ FGL + R K S + A+ PE +R + S ++S+G LL +LL+G+
Sbjct: 156 KITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211
>pdb|2LNI|A Chain A, Solution Nmr Structure Of Stress-Induced-Phosphoprotein 1
Sti1 From Homo Sapiens, Northeast Structural Genomics
Consortium Target Hr4403e
Length = 133
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Query: 248 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAM 307
L K KG+ F++ D A++ YT+ I +Y+ R+ CY Q AL D
Sbjct: 16 ALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPK-DAKLYSNRAACYTKLLEFQLALKDCE 74
Query: 308 QAQIISPIWHIASYLQAAALSAM 330
+ + P + +AAAL AM
Sbjct: 75 ECIQLEPTFIKGYTRKAAALEAM 97
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
Query: 40 KGRALYHDLNAYRILFDEDGNPRLSTFGL-MKNSRDGKSYSTNLAFTP----PEYLRTGR 94
+ R ++ DL + +ED ++ FGL K DG+ L TP PE L
Sbjct: 133 RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKG 191
Query: 95 VTPESVIYSFGTLLLDLLSGKHIPP 119
+ E ++S G ++ LL GK PP
Sbjct: 192 HSFEVDVWSIGCIMYTLLVGK--PP 214
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Query: 25 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG------LMKNSRDGKSY 78
RV+ L L Y + + L+ D+ A +L DG +L+ FG L KNS+ +
Sbjct: 129 RVMQMLLNGLYY-IHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 79 S--TNLAFTPPEYL 90
+ L + PPE L
Sbjct: 188 NRVVTLWYRPPELL 201
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 19/137 (13%)
Query: 1 MPNETLAKHLFHWETHPMKWA--MRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 58
MP L + +++ P KWA VVL AL+ S G ++ D+ +L D+
Sbjct: 151 MPGGDLVNLMSNYDV-PEKWARFYTAEVVL----ALDAIHSMG-FIHRDVKPDNMLLDKS 204
Query: 59 GNPRLSTFG-LMKNSRDGKSYSTNLAFTP----PEYLRT----GRVTPESVIYSFGTLLL 109
G+ +L+ FG MK +++G TP PE L++ G E +S G L
Sbjct: 205 GHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLY 264
Query: 110 DLLSGKHIPPSHALDLI 126
++L G P +A L+
Sbjct: 265 EMLVGD--TPFYADSLV 279
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 17/125 (13%)
Query: 1 MPNETLAKHLFHWETHPMKWA--MRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 58
MP L + +++ P KWA VVL AL+ S G ++ D+ +L D+
Sbjct: 156 MPGGDLVNLMSNYDV-PEKWARFYTAEVVL----ALDAIHSMG-FIHRDVKPDNMLLDKS 209
Query: 59 GNPRLSTFG-LMKNSRDGKSYSTNLAFTP----PEYLRT----GRVTPESVIYSFGTLLL 109
G+ +L+ FG MK +++G TP PE L++ G E +S G L
Sbjct: 210 GHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLY 269
Query: 110 DLLSG 114
++L G
Sbjct: 270 EMLVG 274
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 45 YHDLNAYRILFDEDGNPRLSTFGLMK----NSRDG--KSYSTNLAFTPPEYLRTGRVTPE 98
+ D+ +L DE N ++S FGL N+R+ L + PE L+ E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 99 SV-IYSFGTLLLDLLSGK 115
V ++S G +L +L+G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
Query: 40 KGRALYHDLNAYRILFDEDGNPRLSTFGL-MKNSRDGKSYSTNLAFTP----PEYLRTGR 94
+ R ++ DL + +ED ++ FGL K DG+ L TP PE L
Sbjct: 157 RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKG 215
Query: 95 VTPESVIYSFGTLLLDLLSGKHIPP 119
+ E ++S G ++ LL GK PP
Sbjct: 216 HSFEVDVWSIGCIMYTLLVGK--PP 238
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 45 YHDLNAYRILFDEDGNPRLSTFGLMK----NSRDG--KSYSTNLAFTPPEYLRTGRVTPE 98
+ D+ +L DE N ++S FGL N+R+ L + PE L+ E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 99 SV-IYSFGTLLLDLLSGK 115
V ++S G +L +L+G+
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 63/146 (43%), Gaps = 17/146 (11%)
Query: 44 LYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTN-----LAFTPPEYLRTGRVT 96
++ DL A IL + + ++S FG+ + D +Y+T + +T PE + + T
Sbjct: 138 VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFT 197
Query: 97 PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD---DDGTELVR 153
S ++S+G ++ +++S P D + Q + + EG D L +
Sbjct: 198 SASDVWSYGIVMWEVMSYGERP-------YWDMSNQDVIKAIEEGYRLPPPMDCPIALHQ 250
Query: 154 LASRCLQYEPRERPNPKSLVTALSPL 179
L C Q E +RP +V L L
Sbjct: 251 LMLDCWQKERSDRPKFGQIVNMLDKL 276
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 45 YHDLNAYRILFDEDGNPRLSTFGLMK----NSRDG--KSYSTNLAFTPPEYLRTGRVTPE 98
+ D+ +L DE N ++S FGL N+R+ L + PE L+ E
Sbjct: 126 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 185
Query: 99 SV-IYSFGTLLLDLLSGK 115
V ++S G +L +L+G+
Sbjct: 186 PVDVWSCGIVLTAMLAGE 203
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
Query: 40 KGRALYHDLNAYRILFDEDGNPRLSTFGL-MKNSRDGKSYSTNLAFTP----PEYLRTGR 94
+ R ++ DL + +ED ++ FGL K DG+ L TP PE L
Sbjct: 159 RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKG 217
Query: 95 VTPESVIYSFGTLLLDLLSGKHIPP 119
+ E ++S G ++ LL GK PP
Sbjct: 218 HSFEVDVWSIGCIMYTLLVGK--PP 240
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 45 YHDLNAYRILFDEDGNPRLSTFGLMK----NSRDG--KSYSTNLAFTPPEYLRTGRVTPE 98
+ D+ +L DE N ++S FGL N+R+ L + PE L+ E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 99 SV-IYSFGTLLLDLLSGK 115
V ++S G +L +L+G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 45 YHDLNAYRILFDEDGNPRLSTFGLMK----NSRDG--KSYSTNLAFTPPEYLRTGRVTPE 98
+ D+ +L DE N ++S FGL N+R+ L + PE L+ E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 99 SV-IYSFGTLLLDLLSGK 115
V ++S G +L +L+G+
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 45 YHDLNAYRILFDEDGNPRLSTFGLMK----NSRDG--KSYSTNLAFTPPEYLRTGRVTPE 98
+ D+ +L DE N ++S FGL N+R+ L + PE L+ E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 99 SV-IYSFGTLLLDLLSGK 115
V ++S G +L +L+G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 63/146 (43%), Gaps = 17/146 (11%)
Query: 44 LYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTN-----LAFTPPEYLRTGRVT 96
++ DL A IL + + ++S FG+ + D +Y+T + +T PE + + T
Sbjct: 132 VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFT 191
Query: 97 PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD---DDGTELVR 153
S ++S+G ++ +++S P D + Q + + EG D L +
Sbjct: 192 SASDVWSYGIVMWEVMSYGERP-------YWDMSNQDVIKAIEEGYRLPPPMDCPIALHQ 244
Query: 154 LASRCLQYEPRERPNPKSLVTALSPL 179
L C Q E +RP +V L L
Sbjct: 245 LMLDCWQKERSDRPKFGQIVNMLDKL 270
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 45 YHDLNAYRILFDEDGNPRLSTFGLMK----NSRDG--KSYSTNLAFTPPEYLRTGRVTPE 98
+ D+ +L DE N ++S FGL N+R+ L + PE L+ E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 99 SV-IYSFGTLLLDLLSGK 115
V ++S G +L +L+G+
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 45 YHDLNAYRILFDEDGNPRLSTFGLMK----NSRDG--KSYSTNLAFTPPEYLRTGRVTPE 98
+ D+ +L DE N ++S FGL N+R+ L + PE L+ E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 99 SV-IYSFGTLLLDLLSGK 115
V ++S G +L +L+G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 45 YHDLNAYRILFDEDGNPRLSTFGLMK----NSRDG--KSYSTNLAFTPPEYLRTGRVTPE 98
+ D+ +L DE N ++S FGL N+R+ L + PE L+ E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 99 SV-IYSFGTLLLDLLSGK 115
V ++S G +L +L+G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 45 YHDLNAYRILFDEDGNPRLSTFGLMK----NSRDG--KSYSTNLAFTPPEYLRTGRVTPE 98
+ D+ +L DE N ++S FGL N+R+ L + PE L+ E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 99 SV-IYSFGTLLLDLLSGK 115
V ++S G +L +L+G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 45 YHDLNAYRILFDEDGNPRLSTFGLMK----NSRDG--KSYSTNLAFTPPEYLRTGRVTPE 98
+ D+ +L DE N ++S FGL N+R+ L + PE L+ E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 99 SV-IYSFGTLLLDLLSGK 115
V ++S G +L +L+G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 45 YHDLNAYRILFDEDGNPRLSTFGLMK----NSRDG--KSYSTNLAFTPPEYLRTGRVTPE 98
+ D+ +L DE N ++S FGL N+R+ L + PE L+ E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 99 SV-IYSFGTLLLDLLSGK 115
V ++S G +L +L+G+
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 45 YHDLNAYRILFDEDGNPRLSTFGLMK----NSRDG--KSYSTNLAFTPPEYLRTGRVTPE 98
+ D+ +L DE N ++S FGL N+R+ L + PE L+ E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 99 SV-IYSFGTLLLDLLSGK 115
V ++S G +L +L+G+
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 45 YHDLNAYRILFDEDGNPRLSTFGLMK----NSRDG--KSYSTNLAFTPPEYLRTGRVTPE 98
+ D+ +L DE N ++S FGL N+R+ L + PE L+ E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 99 SV-IYSFGTLLLDLLSGK 115
V ++S G +L +L+G+
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 45 YHDLNAYRILFDEDGNPRLSTFGLMK----NSRDG--KSYSTNLAFTPPEYLRTGRVTPE 98
+ D+ +L DE N ++S FGL N+R+ L + PE L+ E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 99 SV-IYSFGTLLLDLLSGK 115
V ++S G +L +L+G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + + +
Sbjct: 130 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWY 188
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Query: 30 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTN-----L 82
+ + Y + G ++ DL A +L D + ++S FGL + D +Y+T +
Sbjct: 160 VGAGMRYLSDLG-YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPI 218
Query: 83 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 113
+T PE + + S ++SFG ++ ++L+
Sbjct: 219 RWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 45 YHDLNAYRILFDEDGNPRLSTFGLMK----NSRDG--KSYSTNLAFTPPEYLRTGRVTPE 98
+ D+ +L DE N ++S FGL N+R+ L + PE L+ E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 99 SV-IYSFGTLLLDLLSGK 115
V ++S G +L +L+G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + + +
Sbjct: 130 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWY 188
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 45 YHDLNAYRILFDEDGNPRLSTFGLMK----NSRDG--KSYSTNLAFTPPEYLRTGRVTPE 98
+ D+ +L DE N ++S FGL N+R+ L + PE L+ E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 99 SV-IYSFGTLLLDLLSGK 115
V ++S G +L +L+G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 45 YHDLNAYRILFDEDGNPRLSTFGLMK----NSRDG--KSYSTNLAFTPPEYLRTGRVTPE 98
+ D+ +L DE N ++S FGL N+R+ L + PE L+ E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 99 SV-IYSFGTLLLDLLSGK 115
V ++S G +L +L+G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 11/85 (12%)
Query: 44 LYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGKSYSTNLA------FTPPEYLRTG 93
++ DL A IL + + ++S FGL + NS D +Y+++L +T PE +
Sbjct: 138 VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSD-PTYTSSLGGKIPIRWTAPEAIAFR 196
Query: 94 RVTPESVIYSFGTLLLDLLSGKHIP 118
+ T S +S+G ++ +++S P
Sbjct: 197 KFTSASDAWSYGIVMWEVMSFGERP 221
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 45 YHDLNAYRILFDEDGNPRLSTFGLMK----NSRDG--KSYSTNLAFTPPEYLRTGRVTPE 98
+ D+ +L DE N ++S FGL N+R+ L + PE L+ E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 187
Query: 99 SV-IYSFGTLLLDLLSGK 115
V ++S G +L +L+G+
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 45 YHDLNAYRILFDEDGNPRLSTFGLMK----NSRDG--KSYSTNLAFTPPEYLRTGRVTPE 98
+ D+ +L DE N ++S FGL N+R+ L + PE L+ E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 99 SV-IYSFGTLLLDLLSGK 115
V ++S G +L +L+G+
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 45 YHDLNAYRILFDEDGNPRLSTFGLMK----NSRDG--KSYSTNLAFTPPEYLRTGRVTPE 98
+ D+ +L DE N ++S FGL N+R+ L + PE L+ E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 99 SV-IYSFGTLLLDLLSGK 115
V ++S G +L +L+G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + + +
Sbjct: 126 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWY 184
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 120
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 221
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 26 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 84
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 159 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 217
Query: 85 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPP 119
PE + +V I+S G ++ +LL+G+ + P
Sbjct: 218 RAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFP 253
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 64/157 (40%), Gaps = 25/157 (15%)
Query: 24 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYST 80
+R +L + AL K ++ DL IL D+D N +L+ FG G +S
Sbjct: 130 MRALLEVICALH----KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCG 185
Query: 81 NLAFTPPEYLRTGR------VTPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRDRN 130
++ PE + E ++S G ++ LL+G H L +I N
Sbjct: 186 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGN 245
Query: 131 LQMLTDSCLEGQFTDDDGTELVR-LASRCLQYEPRER 166
Q G DD ++ V+ L SR L +P++R
Sbjct: 246 YQF-------GSPEWDDYSDTVKDLVSRFLVVQPQKR 275
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 11/75 (14%)
Query: 2 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS--------KGRALYHDLNAYRI 53
PN +L K+L H W R+ + + L Y + K + DLN+ +
Sbjct: 95 PNGSLXKYL---SLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNV 151
Query: 54 LFDEDGNPRLSTFGL 68
L DG +S FGL
Sbjct: 152 LVKNDGTCVISDFGL 166
>pdb|2L6J|A Chain A, Tah1 Complexed By Meevd
Length = 111
Score = 28.5 bits (62), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 245 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSL 291
M + K++G+ F+Q ++A+ CY Q I A +P Y+ +++
Sbjct: 1 MSQFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQ-NPVGYSNKAM 46
>pdb|2GW1|A Chain A, Crystal Structure Of The Yeast Tom70
pdb|2GW1|B Chain B, Crystal Structure Of The Yeast Tom70
Length = 514
Score = 28.1 bits (61), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 252 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYL 294
K KG+ FR K DAI+ Y ++ P Y+ S CY+
Sbjct: 10 KDKGNQFFRNKKYDDAIKYYNWALELKE--DPVFYSNLSACYV 50
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.131 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,481,759
Number of Sequences: 62578
Number of extensions: 431529
Number of successful extensions: 1591
Number of sequences better than 100.0: 554
Number of HSP's better than 100.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 473
Number of HSP's that attempted gapping in prelim test: 1384
Number of HSP's gapped (non-prelim): 555
length of query: 357
length of database: 14,973,337
effective HSP length: 100
effective length of query: 257
effective length of database: 8,715,537
effective search space: 2239893009
effective search space used: 2239893009
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)