Query 018351
Match_columns 357
No_of_seqs 197 out of 230
Neff 3.2
Searched_HMMs 13730
Date Mon Mar 25 13:54:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018351.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/018351hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2ctda2 g.37.1.1 (A:61-90) Zin 59.7 1.4 9.8E-05 27.9 0.9 12 1-12 2-13 (30)
2 d1rk8c_ b.72.3.1 (C:) Pym (Wit 47.0 4.6 0.00034 26.0 1.9 25 306-330 3-28 (33)
3 d1wjva2 g.37.1.2 (A:36-66) Cel 25.6 6 0.00044 25.2 -0.3 11 1-11 2-12 (31)
4 d2g3wa1 c.52.1.33 (A:4-182) Hy 22.2 15 0.0011 30.9 1.5 25 179-203 104-128 (179)
5 d2g3wa1 c.52.1.33 (A:4-182) Hy 20.4 21 0.0015 30.0 2.1 58 287-354 61-122 (179)
6 d1xata_ b.81.1.3 (A:) Xenobiot 12.1 22 0.0016 29.0 0.1 33 167-200 157-189 (208)
7 d1zroa2 a.264.1.1 (A:283-596) 11.8 46 0.0034 29.3 2.1 18 340-357 163-180 (314)
8 d2c6ja1 a.264.1.1 (A:15-308) D 9.4 59 0.0043 28.3 1.9 16 341-356 131-146 (294)
9 d1gvha2 b.43.4.2 (A:147-253) F 9.2 1.3E+02 0.0096 21.0 3.6 20 306-325 35-54 (107)
10 d1nxia_ d.58.47.1 (A:) Hypothe 9.0 92 0.0067 24.2 2.8 25 28-52 91-116 (132)
No 1
>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}
Probab=59.74 E-value=1.4 Score=27.92 Aligned_cols=12 Identities=58% Similarity=1.132 Sum_probs=10.9
Q ss_pred CccccccccccC
Q 018351 1 MFTCIACTKQMA 12 (357)
Q Consensus 1 MltCIacsk~~~ 12 (357)
||||-.|-||++
T Consensus 2 ~ftc~hcgkqlk 13 (30)
T d2ctda2 2 MFTCHHCGKQLR 13 (30)
T ss_dssp CCCCSSSCCCCS
T ss_pred ceechhHHHHHh
Confidence 899999999884
No 2
>d1rk8c_ b.72.3.1 (C:) Pym (Within the bgcn gene intron protein, WIBG), N-terminal domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=46.98 E-value=4.6 Score=25.96 Aligned_cols=25 Identities=36% Similarity=0.611 Sum_probs=20.3
Q ss_pred eeeCCceEEEEEEcCCCc-cceeEEE
Q 018351 306 EQDEPGVYITIRQLADGS-RELRRVR 330 (357)
Q Consensus 306 EQ~EPGVYITl~~~p~G~-r~LKRVR 330 (357)
.+++-|-||.-...|||+ +.-|||+
T Consensus 3 v~d~~G~~i~atqRpDGtWRK~rrvk 28 (33)
T d1rk8c_ 3 LQSSEGKFIPATKRPDGTWRKARRVK 28 (33)
T ss_dssp EEETTEEEECCEECTTSCEECCEECC
T ss_pred EecCCCcEeccccCCCCccccceecc
Confidence 357789999999999998 6666664
No 3
>d1wjva2 g.37.1.2 (A:36-66) Cell growth regulating nucleolar protein LyaR {Mouse (Mus musculus) [TaxId: 10090]}
Probab=25.58 E-value=6 Score=25.17 Aligned_cols=11 Identities=36% Similarity=1.026 Sum_probs=9.0
Q ss_pred Ccccccccccc
Q 018351 1 MFTCIACTKQM 11 (357)
Q Consensus 1 MltCIacsk~~ 11 (357)
+|+||-|.+.-
T Consensus 2 ~~sCiDC~~~F 12 (31)
T d1wjva2 2 CLSCIDCGKDF 12 (31)
T ss_dssp EEEETTTTEEE
T ss_pred cEEEeecCCcc
Confidence 48999999854
No 4
>d2g3wa1 c.52.1.33 (A:4-182) Hypothetical protein XAC2396 {Xanthomonas axonopodis pv. citri [TaxId: 92829]}
Probab=22.20 E-value=15 Score=30.89 Aligned_cols=25 Identities=12% Similarity=0.473 Sum_probs=20.1
Q ss_pred hchHHHHHHHHHhhhhHHhhhcccc
Q 018351 179 FNKWQAQRWWGENYDRIMELYNVQR 203 (357)
Q Consensus 179 F~e~qAq~WW~eN~~rV~e~Ynv~~ 203 (357)
|+...++.||..|..++...-|+..
T Consensus 104 yg~r~~~~Ww~~~~~kl~r~~nl~V 128 (179)
T d2g3wa1 104 YGGQATETWWKKHANAMGRYRNLRV 128 (179)
T ss_dssp CCTHHHHHHHHHHHHHHTTCSSEEE
T ss_pred eCCchHHHHHHHhHHHhhCcCCcEE
Confidence 6677889999999999987766433
No 5
>d2g3wa1 c.52.1.33 (A:4-182) Hypothetical protein XAC2396 {Xanthomonas axonopodis pv. citri [TaxId: 92829]}
Probab=20.43 E-value=21 Score=29.95 Aligned_cols=58 Identities=26% Similarity=0.551 Sum_probs=34.0
Q ss_pred CCCCCcccccccccccceEeeeCCceEEEEEEcCCCccceeEEEeehh----ccchhhHHHHHHHhHhHHHH
Q 018351 287 RDEPSVSVSNASEVEAEWVEQDEPGVYITIRQLADGSRELRRVRFSRE----RFGEVNAKTWWEENRERIQA 354 (357)
Q Consensus 287 ~d~~~vs~snas~~e~EwVEQ~EPGVYITl~~~p~G~r~LKRVRFSR~----~F~e~qA~~WW~eN~~RI~e 354 (357)
.|++-+-+.+..+.=.-|||=-+| +=.|.-|-.+=+++ .|+...++.||..|+.++..
T Consensus 61 ~dEPDLw~k~~~g~i~lWIevG~P----------d~kRl~kA~~~a~~V~vy~yg~r~~~~Ww~~~~~kl~r 122 (179)
T d2g3wa1 61 DDEPDLWRRDYTGDPDLWIDLGQP----------DESRVRKACNRSREAVVIGYGGQATETWWKKHANAMGR 122 (179)
T ss_dssp SSCCSEEEECTTSCEEEEEEESCC----------CHHHHHHHHHHSSEEEEEECCTHHHHHHHHHHHHHHTT
T ss_pred CCCcceeeeCCCCCEEEEEEcCCC----------CHHHHHHHhccCCcEEEEEeCCchHHHHHHHhHHHhhC
Confidence 355556667766666778885444 22222111111110 46677789999999998864
No 6
>d1xata_ b.81.1.3 (A:) Xenobiotic acetyltransferase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=12.10 E-value=22 Score=29.01 Aligned_cols=33 Identities=18% Similarity=0.398 Sum_probs=24.9
Q ss_pred ccceEEeehHhhhchHHHHHHHHHhhhhHHhhhc
Q 018351 167 NDLKRIRFSREMFNKWQAQRWWGENYDRIMELYN 200 (357)
Q Consensus 167 ~~LKRVRFSR~~F~e~qAq~WW~eN~~rV~e~Yn 200 (357)
|.+|+ ||+.+.+..-..-+||.-..++|.+.+.
T Consensus 157 k~ik~-R~~~~~i~~l~~~~w~~~~~~~~~~~~~ 189 (208)
T d1xata_ 157 RTIRK-RFSDGDIQNLLEMAWWDWPLADIEAAMP 189 (208)
T ss_dssp EEEEE-SSCHHHHHHHHHHCGGGSCHHHHHHSHH
T ss_pred EEEec-cCCHHHHHHHHHhccccCCHHHHHHHHH
Confidence 55666 8887777766677999988888877654
No 7
>d1zroa2 a.264.1.1 (A:283-596) Erythrocyte binding antigen region II {Plasmodium falciparum [TaxId: 5833]}
Probab=11.76 E-value=46 Score=29.26 Aligned_cols=18 Identities=11% Similarity=0.390 Sum_probs=14.0
Q ss_pred hHHHHHHHhHhHHHHhcC
Q 018351 340 NAKTWWEENRERIQAQYL 357 (357)
Q Consensus 340 qA~~WW~eN~~RI~e~Yl 357 (357)
.-+.||++|+..|-+-+|
T Consensus 163 ~R~~WW~~n~~~IW~aM~ 180 (314)
T d1zroa2 163 FRDEWWKVIKKDVWNVIS 180 (314)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHhHHHHHHhhc
Confidence 457899999998876543
No 8
>d2c6ja1 a.264.1.1 (A:15-308) Duffy receptor, alpha form {Plasmodium knowlesi [TaxId: 5850]}
Probab=9.39 E-value=59 Score=28.25 Aligned_cols=16 Identities=38% Similarity=0.908 Sum_probs=12.6
Q ss_pred HHHHHHHhHhHHHHhc
Q 018351 341 AKTWWEENRERIQAQY 356 (357)
Q Consensus 341 A~~WW~eN~~RI~e~Y 356 (357)
-+.||++|+..|=+-+
T Consensus 131 R~~WW~~n~~~IW~aM 146 (294)
T d2c6ja1 131 RKQWWNESKEHIWRAM 146 (294)
T ss_dssp HHHHHHHTHHHHHHHH
T ss_pred HHHHHHHhHHHHHHHH
Confidence 4689999999886644
No 9
>d1gvha2 b.43.4.2 (A:147-253) Flavohemoglobin, central domain {Escherichia coli [TaxId: 562]}
Probab=9.25 E-value=1.3e+02 Score=20.99 Aligned_cols=20 Identities=20% Similarity=0.428 Sum_probs=15.6
Q ss_pred eeeCCceEEEEEEcCCCccc
Q 018351 306 EQDEPGVYITIRQLADGSRE 325 (357)
Q Consensus 306 EQ~EPGVYITl~~~p~G~r~ 325 (357)
-.++||-||+|....+|...
T Consensus 35 ~~~~pGQ~v~l~~~~~~~~~ 54 (107)
T d1gvha2 35 AEYRPGQYLGVWLKPEGFPH 54 (107)
T ss_dssp CCCCTTCEEEEEECCTTCSS
T ss_pred cCCCCCCEEEEEeeccccCc
Confidence 46899999999987666543
No 10
>d1nxia_ d.58.47.1 (A:) Hypothetical protein VC0424 {Vibrio cholerae [TaxId: 666]}
Probab=9.03 E-value=92 Score=24.24 Aligned_cols=25 Identities=12% Similarity=0.202 Sum_probs=21.8
Q ss_pred CchHHHHHHHHHHHHHHhhhhcc-Cc
Q 018351 28 PSTKEAVKSLTAQIKDMAIKISG-YR 52 (357)
Q Consensus 28 p~t~~aiKslt~QiKDmalK~Sg-yr 52 (357)
+-+-+.|...+.+|-++|.||.| |-
T Consensus 91 ~l~~~~I~~~~~~L~~LA~~~~g~YD 116 (132)
T d1nxia_ 91 ALDAKLIDEQVEKLVNLAEKFDIIYD 116 (132)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHTCEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHhCcEee
Confidence 34578999999999999999999 74
Done!