Query 018352
Match_columns 357
No_of_seqs 367 out of 3002
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 13:55:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018352.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018352hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2vdw_A Vaccinia virus capping 100.0 5.2E-40 1.8E-44 314.0 21.1 260 2-288 12-302 (302)
2 3bgv_A MRNA CAP guanine-N7 met 100.0 7.7E-37 2.6E-41 291.7 25.3 259 13-288 9-312 (313)
3 1ri5_A MRNA capping enzyme; me 100.0 5.5E-34 1.9E-38 267.8 29.2 250 13-292 46-296 (298)
4 4gek_A TRNA (CMO5U34)-methyltr 99.8 5.3E-19 1.8E-23 165.1 16.4 114 22-145 61-177 (261)
5 3sm3_A SAM-dependent methyltra 99.8 1.7E-17 5.7E-22 149.6 16.2 117 25-149 24-144 (235)
6 3bus_A REBM, methyltransferase 99.7 5.6E-16 1.9E-20 143.5 25.3 177 15-246 44-222 (273)
7 3l8d_A Methyltransferase; stru 99.7 1E-17 3.5E-22 152.2 13.2 187 25-289 47-233 (242)
8 3hem_A Cyclopropane-fatty-acyl 99.7 1.6E-17 5.4E-22 157.0 14.8 184 29-255 70-258 (302)
9 3thr_A Glycine N-methyltransfe 99.7 1.2E-16 4.1E-21 149.7 20.1 119 31-154 57-183 (293)
10 2o57_A Putative sarcosine dime 99.7 1E-15 3.4E-20 143.9 25.4 111 29-149 80-190 (297)
11 1pjz_A Thiopurine S-methyltran 99.7 1.7E-17 5.7E-22 148.6 12.4 109 29-146 20-140 (203)
12 4htf_A S-adenosylmethionine-de 99.7 1.8E-16 6.2E-21 148.2 18.9 215 23-290 60-281 (285)
13 1kpg_A CFA synthase;, cyclopro 99.7 5.3E-16 1.8E-20 145.0 21.6 180 29-253 62-241 (287)
14 4hg2_A Methyltransferase type 99.7 2.7E-18 9.2E-23 160.0 5.6 102 26-146 34-135 (257)
15 3ujc_A Phosphoethanolamine N-m 99.7 2.3E-16 8E-21 144.8 17.7 161 30-248 54-214 (266)
16 3g5l_A Putative S-adenosylmeth 99.7 1.5E-16 5.1E-21 146.0 16.2 106 31-150 44-149 (253)
17 1xtp_A LMAJ004091AAA; SGPP, st 99.7 2E-16 6.9E-21 144.6 16.0 107 30-147 92-198 (254)
18 3pfg_A N-methyltransferase; N, 99.7 3.7E-16 1.3E-20 144.3 17.9 108 25-147 44-152 (263)
19 3g2m_A PCZA361.24; SAM-depende 99.7 1.1E-16 3.6E-21 151.1 14.5 120 23-152 74-196 (299)
20 2a14_A Indolethylamine N-methy 99.7 7.4E-17 2.5E-21 149.9 12.3 129 15-146 36-197 (263)
21 2pxx_A Uncharacterized protein 99.7 1.9E-16 6.3E-21 140.8 13.3 124 24-156 35-169 (215)
22 2p7i_A Hypothetical protein; p 99.7 8E-17 2.7E-21 146.0 11.1 108 31-155 42-150 (250)
23 3h2b_A SAM-dependent methyltra 99.7 1.9E-16 6.3E-21 140.4 12.9 142 32-241 42-183 (203)
24 3dtn_A Putative methyltransfer 99.7 9.8E-16 3.3E-20 138.7 17.4 107 30-148 43-150 (234)
25 3jwh_A HEN1; methyltransferase 99.7 7.4E-16 2.5E-20 138.2 15.8 111 30-149 28-143 (217)
26 1vl5_A Unknown conserved prote 99.7 1.4E-15 4.7E-20 140.2 17.9 105 30-146 36-140 (260)
27 2fk8_A Methoxy mycolic acid sy 99.7 2.2E-15 7.7E-20 143.1 19.9 177 30-251 89-265 (318)
28 3dh0_A SAM dependent methyltra 99.7 4.2E-16 1.4E-20 139.6 14.0 109 29-148 35-145 (219)
29 3ocj_A Putative exported prote 99.7 3E-16 1E-20 148.7 13.4 115 26-148 113-229 (305)
30 3dlc_A Putative S-adenosyl-L-m 99.7 4.3E-16 1.5E-20 138.6 13.6 119 21-149 33-151 (219)
31 3jwg_A HEN1, methyltransferase 99.7 7.3E-16 2.5E-20 138.3 15.2 111 30-149 28-143 (219)
32 3cc8_A Putative methyltransfer 99.7 8.3E-16 2.8E-20 137.7 15.2 200 23-288 24-228 (230)
33 3dli_A Methyltransferase; PSI- 99.7 2.8E-16 9.7E-21 143.3 12.2 145 29-241 39-185 (240)
34 3lcc_A Putative methyl chlorid 99.7 3.9E-16 1.3E-20 141.7 12.8 108 31-148 66-173 (235)
35 3ofk_A Nodulation protein S; N 99.7 6.7E-16 2.3E-20 138.1 13.6 108 31-150 51-158 (216)
36 1y8c_A S-adenosylmethionine-de 99.7 9.3E-16 3.2E-20 139.0 14.3 126 15-152 22-148 (246)
37 3f4k_A Putative methyltransfer 99.7 5.2E-16 1.8E-20 142.3 12.5 108 30-148 45-152 (257)
38 2gb4_A Thiopurine S-methyltran 99.7 3.5E-16 1.2E-20 145.2 11.3 109 30-146 67-191 (252)
39 3kkz_A Uncharacterized protein 99.7 5.8E-16 2E-20 143.5 12.6 108 30-148 45-152 (267)
40 1wzn_A SAM-dependent methyltra 99.7 1.9E-15 6.4E-20 138.4 15.5 120 18-149 28-148 (252)
41 1nkv_A Hypothetical protein YJ 99.6 9.6E-16 3.3E-20 140.5 12.9 109 29-148 34-142 (256)
42 3g5t_A Trans-aconitate 3-methy 99.6 1.6E-15 5.5E-20 143.0 14.7 112 29-145 34-148 (299)
43 3ou2_A SAM-dependent methyltra 99.6 3.6E-15 1.2E-19 132.9 16.1 105 30-149 45-149 (218)
44 2gs9_A Hypothetical protein TT 99.6 1.3E-15 4.4E-20 135.8 13.1 115 23-156 28-142 (211)
45 1ve3_A Hypothetical protein PH 99.6 2.2E-15 7.7E-20 135.2 14.7 115 26-151 33-147 (227)
46 3vc1_A Geranyl diphosphate 2-C 99.6 2.3E-15 7.7E-20 143.1 15.1 109 30-149 116-224 (312)
47 1xxl_A YCGJ protein; structura 99.6 5.4E-15 1.9E-19 134.9 17.0 108 29-148 19-126 (239)
48 3d2l_A SAM-dependent methyltra 99.6 1.5E-15 5.1E-20 137.8 13.1 114 27-152 29-143 (243)
49 3p9n_A Possible methyltransfer 99.6 3.3E-15 1.1E-19 131.4 14.7 126 16-149 29-156 (189)
50 2p8j_A S-adenosylmethionine-de 99.6 1.3E-15 4.5E-20 135.2 12.2 111 29-149 21-131 (209)
51 2g72_A Phenylethanolamine N-me 99.6 1.4E-15 4.9E-20 142.7 11.9 114 31-145 71-214 (289)
52 3mti_A RRNA methylase; SAM-dep 99.6 2.7E-15 9.2E-20 131.1 12.8 118 24-148 15-137 (185)
53 1zx0_A Guanidinoacetate N-meth 99.6 7E-16 2.4E-20 140.6 9.2 112 27-146 56-170 (236)
54 3eey_A Putative rRNA methylase 99.6 4.4E-15 1.5E-19 131.0 13.8 120 24-148 15-141 (197)
55 3hnr_A Probable methyltransfer 99.6 3.3E-15 1.1E-19 133.8 13.1 105 30-149 44-148 (220)
56 3ccf_A Cyclopropane-fatty-acyl 99.6 3.3E-15 1.1E-19 139.3 13.6 102 30-149 56-157 (279)
57 3bkw_A MLL3908 protein, S-aden 99.6 1.2E-15 4E-20 138.5 9.9 105 31-149 43-147 (243)
58 3bkx_A SAM-dependent methyltra 99.6 5E-14 1.7E-18 130.5 21.1 118 23-148 34-161 (275)
59 3bxo_A N,N-dimethyltransferase 99.6 6.9E-15 2.4E-19 133.0 14.9 110 25-149 34-144 (239)
60 3g07_A 7SK snRNA methylphospha 99.6 1.7E-15 5.7E-20 143.1 11.1 117 31-149 46-223 (292)
61 2ex4_A Adrenal gland protein A 99.6 2E-15 6.8E-20 137.7 11.3 109 31-148 79-187 (241)
62 3cgg_A SAM-dependent methyltra 99.6 1E-14 3.5E-19 127.0 14.2 112 23-149 38-150 (195)
63 3ggd_A SAM-dependent methyltra 99.6 2.9E-15 1E-19 136.7 10.5 113 29-149 54-166 (245)
64 2kw5_A SLR1183 protein; struct 99.6 1E-14 3.5E-19 129.0 13.7 108 29-150 28-135 (202)
65 3e23_A Uncharacterized protein 99.6 4.4E-15 1.5E-19 132.4 11.2 103 29-148 41-143 (211)
66 2avn_A Ubiquinone/menaquinone 99.6 1.9E-14 6.6E-19 132.9 15.2 114 23-153 46-159 (260)
67 2i62_A Nicotinamide N-methyltr 99.6 6.1E-15 2.1E-19 135.4 11.6 115 30-146 55-198 (265)
68 2yqz_A Hypothetical protein TT 99.6 1.3E-14 4.4E-19 133.1 13.1 107 29-148 37-143 (263)
69 1vlm_A SAM-dependent methyltra 99.6 9.7E-15 3.3E-19 131.3 12.0 148 24-240 41-188 (219)
70 3m70_A Tellurite resistance pr 99.6 9.3E-15 3.2E-19 136.6 12.3 104 31-146 120-223 (286)
71 2xvm_A Tellurite resistance pr 99.6 1.1E-14 3.8E-19 127.8 11.9 105 31-146 32-136 (199)
72 3orh_A Guanidinoacetate N-meth 99.6 4.4E-15 1.5E-19 136.0 9.3 116 24-145 53-169 (236)
73 3mgg_A Methyltransferase; NYSG 99.6 1.4E-14 4.9E-19 134.3 12.9 109 30-149 36-145 (276)
74 1dus_A MJ0882; hypothetical pr 99.6 4.4E-14 1.5E-18 123.0 15.1 111 30-151 51-162 (194)
75 3hm2_A Precorrin-6Y C5,15-meth 99.6 4.2E-14 1.4E-18 122.0 14.7 116 22-151 15-132 (178)
76 3evz_A Methyltransferase; NYSG 99.6 4.5E-14 1.5E-18 127.5 15.5 118 25-150 49-183 (230)
77 3e8s_A Putative SAM dependent 99.6 5.9E-15 2E-19 131.9 9.3 104 31-149 52-155 (227)
78 3gu3_A Methyltransferase; alph 99.6 1.7E-14 5.8E-19 135.2 12.5 106 30-148 21-128 (284)
79 3iv6_A Putative Zn-dependent a 99.6 3.9E-14 1.3E-18 132.2 13.9 109 29-149 43-151 (261)
80 3grz_A L11 mtase, ribosomal pr 99.5 2.3E-14 8E-19 127.3 11.8 106 27-148 56-161 (205)
81 3lpm_A Putative methyltransfer 99.5 4.5E-14 1.5E-18 130.7 13.9 125 21-149 36-179 (259)
82 4fsd_A Arsenic methyltransfera 99.5 1.4E-14 4.8E-19 142.0 11.1 110 30-149 82-206 (383)
83 2aot_A HMT, histamine N-methyl 99.5 2E-14 6.8E-19 135.2 11.5 114 31-150 52-176 (292)
84 3e05_A Precorrin-6Y C5,15-meth 99.5 2.3E-13 7.9E-18 120.8 17.2 115 22-150 30-146 (204)
85 3q7e_A Protein arginine N-meth 99.5 2E-14 6.8E-19 139.4 11.0 106 30-143 65-170 (349)
86 2esr_A Methyltransferase; stru 99.5 3.1E-14 1.1E-18 123.4 11.0 111 30-150 30-142 (177)
87 3njr_A Precorrin-6Y methylase; 99.5 1.6E-13 5.6E-18 122.8 16.1 108 29-152 53-160 (204)
88 2p35_A Trans-aconitate 2-methy 99.5 2.5E-14 8.4E-19 131.1 10.8 109 24-149 25-135 (259)
89 1yzh_A TRNA (guanine-N(7)-)-me 99.5 1E-13 3.6E-18 124.3 14.5 116 29-150 39-160 (214)
90 3ege_A Putative methyltransfer 99.5 1.7E-14 5.8E-19 133.5 9.6 101 30-149 33-133 (261)
91 2fhp_A Methylase, putative; al 99.5 6.6E-14 2.3E-18 121.8 12.8 114 30-150 43-158 (187)
92 2fyt_A Protein arginine N-meth 99.5 6E-14 2E-18 135.5 13.6 107 29-143 62-168 (340)
93 3dxy_A TRNA (guanine-N(7)-)-me 99.5 2.5E-14 8.6E-19 129.7 10.1 118 29-151 32-155 (218)
94 4e2x_A TCAB9; kijanose, tetron 99.5 1.3E-14 4.3E-19 143.3 8.6 117 23-153 98-215 (416)
95 2ift_A Putative methylase HI07 99.5 2.9E-14 1E-18 127.2 9.0 110 31-149 53-166 (201)
96 3i9f_A Putative type 11 methyl 99.5 1.8E-14 6.2E-19 123.9 7.1 100 29-148 15-114 (170)
97 3r0q_C Probable protein argini 99.5 5.1E-14 1.8E-18 137.8 11.2 107 30-145 62-168 (376)
98 1nt2_A Fibrillarin-like PRE-rR 99.5 1.2E-13 4.1E-18 124.4 12.8 106 29-146 55-161 (210)
99 3lbf_A Protein-L-isoaspartate 99.5 1.5E-13 5.3E-18 122.2 13.3 102 29-148 75-176 (210)
100 2fca_A TRNA (guanine-N(7)-)-me 99.5 1.1E-13 3.6E-18 124.7 12.3 116 29-150 36-157 (213)
101 1af7_A Chemotaxis receptor met 99.5 1.2E-13 4E-18 129.8 12.9 117 20-145 96-251 (274)
102 3ckk_A TRNA (guanine-N(7)-)-me 99.5 9.2E-14 3.1E-18 127.5 11.7 119 28-150 43-172 (235)
103 3htx_A HEN1; HEN1, small RNA m 99.5 4.2E-13 1.4E-17 141.1 18.0 111 31-150 721-838 (950)
104 1l3i_A Precorrin-6Y methyltran 99.5 2.4E-13 8.3E-18 118.0 13.7 110 29-152 31-140 (192)
105 2qe6_A Uncharacterized protein 99.5 3.4E-13 1.1E-17 126.5 15.3 112 31-149 77-199 (274)
106 1g6q_1 HnRNP arginine N-methyl 99.5 1.2E-13 4E-18 132.7 12.3 106 30-143 37-142 (328)
107 1ws6_A Methyltransferase; stru 99.5 9.3E-14 3.2E-18 118.9 9.9 111 29-150 39-151 (171)
108 4df3_A Fibrillarin-like rRNA/T 99.5 2.8E-13 9.5E-18 124.3 13.2 106 29-146 75-182 (233)
109 2r3s_A Uncharacterized protein 99.5 4.4E-13 1.5E-17 127.8 15.2 109 30-148 164-273 (335)
110 1p91_A Ribosomal RNA large sub 99.5 2.6E-13 8.7E-18 125.5 13.0 102 30-154 84-186 (269)
111 3fpf_A Mtnas, putative unchara 99.5 6.1E-13 2.1E-17 125.9 15.5 105 29-149 120-225 (298)
112 3dp7_A SAM-dependent methyltra 99.5 4.1E-13 1.4E-17 130.5 14.8 107 30-146 178-287 (363)
113 3i53_A O-methyltransferase; CO 99.5 4E-13 1.4E-17 128.6 14.2 106 31-147 169-275 (332)
114 2yxd_A Probable cobalt-precorr 99.5 6.9E-13 2.4E-17 114.4 14.1 106 29-153 33-138 (183)
115 3fzg_A 16S rRNA methylase; met 99.5 6.5E-14 2.2E-18 124.3 7.3 106 27-145 45-151 (200)
116 3dmg_A Probable ribosomal RNA 99.5 1.1E-12 3.9E-17 128.6 16.9 111 31-150 233-344 (381)
117 1vbf_A 231AA long hypothetical 99.5 5.5E-13 1.9E-17 120.4 13.3 101 29-149 68-168 (231)
118 3gwz_A MMCR; methyltransferase 99.5 1.8E-12 6.3E-17 126.1 17.9 111 24-145 194-306 (369)
119 2fpo_A Methylase YHHF; structu 99.5 1.4E-13 4.9E-18 122.8 9.1 108 31-149 54-163 (202)
120 2frn_A Hypothetical protein PH 99.5 3.2E-13 1.1E-17 126.7 11.8 110 24-148 118-227 (278)
121 2ozv_A Hypothetical protein AT 99.4 2.9E-13 9.9E-18 125.7 11.1 130 20-149 23-173 (260)
122 1o9g_A RRNA methyltransferase; 99.4 4.9E-13 1.7E-17 122.8 12.1 114 31-145 51-213 (250)
123 1fbn_A MJ fibrillarin homologu 99.4 5E-13 1.7E-17 121.3 11.9 104 30-145 73-177 (230)
124 3uwp_A Histone-lysine N-methyl 99.4 5.9E-13 2E-17 131.0 13.2 108 29-145 171-287 (438)
125 2y1w_A Histone-arginine methyl 99.4 4.3E-13 1.5E-17 129.8 12.0 107 30-146 49-155 (348)
126 1qzz_A RDMB, aclacinomycin-10- 99.4 1.2E-12 4.2E-17 126.9 15.1 107 30-147 181-288 (374)
127 3mcz_A O-methyltransferase; ad 99.4 7.3E-13 2.5E-17 127.6 13.3 107 32-146 180-287 (352)
128 2nxc_A L11 mtase, ribosomal pr 99.4 4.7E-13 1.6E-17 123.9 11.1 104 26-146 115-218 (254)
129 1x19_A CRTF-related protein; m 99.4 2.9E-12 9.8E-17 124.0 16.5 113 23-146 181-295 (359)
130 3u81_A Catechol O-methyltransf 99.4 1.2E-12 4E-17 118.1 12.8 120 31-157 58-184 (221)
131 2pjd_A Ribosomal RNA small sub 99.4 5.7E-13 2E-17 128.6 11.2 117 23-149 187-306 (343)
132 3m33_A Uncharacterized protein 99.4 1.9E-13 6.6E-18 123.6 7.3 97 24-143 41-139 (226)
133 2ipx_A RRNA 2'-O-methyltransfe 99.4 1.1E-12 3.6E-17 119.2 12.0 107 29-147 75-183 (233)
134 2yxe_A Protein-L-isoaspartate 99.4 1.9E-12 6.6E-17 115.5 13.5 104 29-149 75-180 (215)
135 4dcm_A Ribosomal RNA large sub 99.4 1.3E-12 4.6E-17 127.8 13.5 113 31-150 222-338 (375)
136 1xdz_A Methyltransferase GIDB; 99.4 6.4E-13 2.2E-17 121.4 10.2 104 31-146 70-174 (240)
137 2ip2_A Probable phenazine-spec 99.4 1.9E-12 6.5E-17 123.8 13.8 103 33-146 169-272 (334)
138 3gdh_A Trimethylguanosine synt 99.4 6.9E-14 2.4E-18 127.3 3.5 103 31-145 78-180 (241)
139 3p2e_A 16S rRNA methylase; met 99.4 4.2E-13 1.4E-17 122.2 8.2 119 21-145 14-138 (225)
140 3ntv_A MW1564 protein; rossman 99.4 1.4E-12 4.6E-17 118.8 11.4 104 31-145 71-175 (232)
141 1i1n_A Protein-L-isoaspartate 99.4 1.8E-12 6.1E-17 116.7 12.1 105 29-149 75-185 (226)
142 1jsx_A Glucose-inhibited divis 99.4 4.7E-12 1.6E-16 112.2 14.5 101 31-147 65-166 (207)
143 4dzr_A Protein-(glutamine-N5) 99.4 1.3E-13 4.5E-18 122.0 4.3 115 30-148 29-167 (215)
144 1tw3_A COMT, carminomycin 4-O- 99.4 3.2E-12 1.1E-16 123.4 14.2 108 30-148 182-290 (360)
145 3tma_A Methyltransferase; thum 99.4 3.4E-12 1.2E-16 123.5 14.4 116 29-151 201-322 (354)
146 3mq2_A 16S rRNA methyltransfer 99.4 7E-13 2.4E-17 118.8 8.9 111 29-146 25-140 (218)
147 2b3t_A Protein methyltransfera 99.4 7E-12 2.4E-16 116.9 15.9 111 30-148 108-240 (276)
148 2pbf_A Protein-L-isoaspartate 99.4 2.2E-12 7.4E-17 116.3 11.9 108 29-148 78-195 (227)
149 2b78_A Hypothetical protein SM 99.4 2.5E-12 8.5E-17 126.3 12.8 123 25-149 206-334 (385)
150 3duw_A OMT, O-methyltransferas 99.4 3.4E-12 1.2E-16 114.6 12.6 108 31-147 58-168 (223)
151 3tfw_A Putative O-methyltransf 99.4 2.5E-12 8.6E-17 118.4 11.6 107 31-147 63-171 (248)
152 2igt_A SAM dependent methyltra 99.4 3.7E-12 1.3E-16 122.7 13.1 127 18-149 142-275 (332)
153 1nv8_A HEMK protein; class I a 99.4 4.4E-12 1.5E-16 119.5 13.3 111 31-149 123-252 (284)
154 3mb5_A SAM-dependent methyltra 99.4 6.1E-12 2.1E-16 115.3 13.8 108 29-152 91-200 (255)
155 2vdv_E TRNA (guanine-N(7)-)-me 99.4 2.4E-12 8.4E-17 118.0 11.1 114 31-149 49-176 (246)
156 3b3j_A Histone-arginine methyl 99.4 3.9E-12 1.3E-16 128.3 13.2 106 30-145 157-262 (480)
157 1ej0_A FTSJ; methyltransferase 99.4 3.9E-12 1.3E-16 108.5 11.2 109 29-150 20-140 (180)
158 2pwy_A TRNA (adenine-N(1)-)-me 99.4 3E-12 1E-16 117.1 11.2 109 29-153 94-205 (258)
159 1g8a_A Fibrillarin-like PRE-rR 99.4 4.4E-12 1.5E-16 114.4 12.1 106 29-146 71-178 (227)
160 3dr5_A Putative O-methyltransf 99.4 1.3E-12 4.4E-17 118.6 8.6 103 32-145 57-162 (221)
161 4hc4_A Protein arginine N-meth 99.4 1.9E-12 6.6E-17 126.6 10.4 104 31-143 83-186 (376)
162 3tr6_A O-methyltransferase; ce 99.4 2.6E-12 8.8E-17 115.5 10.4 107 31-146 64-174 (225)
163 1yb2_A Hypothetical protein TA 99.4 2.5E-12 8.6E-17 120.0 10.5 106 30-152 109-217 (275)
164 1u2z_A Histone-lysine N-methyl 99.3 1.1E-11 3.7E-16 123.3 15.6 110 29-145 240-358 (433)
165 3id6_C Fibrillarin-like rRNA/T 99.3 8.5E-12 2.9E-16 114.4 13.7 106 29-146 74-181 (232)
166 2gpy_A O-methyltransferase; st 99.3 3.9E-12 1.3E-16 115.3 11.3 107 31-147 54-161 (233)
167 2yvl_A TRMI protein, hypotheti 99.3 1.1E-11 3.8E-16 112.7 14.4 108 30-153 90-197 (248)
168 3giw_A Protein of unknown func 99.3 5.1E-12 1.8E-16 118.4 12.1 111 33-147 80-201 (277)
169 1i9g_A Hypothetical protein RV 99.3 8E-12 2.7E-16 116.1 13.4 111 29-154 97-211 (280)
170 2plw_A Ribosomal RNA methyltra 99.3 5.4E-12 1.8E-16 111.3 11.2 109 29-149 20-157 (201)
171 1dl5_A Protein-L-isoaspartate 99.3 7E-12 2.4E-16 119.6 12.7 103 29-148 73-177 (317)
172 3g89_A Ribosomal RNA small sub 99.3 5.7E-12 1.9E-16 116.4 11.7 105 31-147 80-185 (249)
173 1jg1_A PIMT;, protein-L-isoasp 99.3 8.7E-12 3E-16 113.4 12.5 104 29-149 89-192 (235)
174 2b25_A Hypothetical protein; s 99.3 2.2E-11 7.5E-16 116.8 15.2 115 29-156 103-229 (336)
175 2as0_A Hypothetical protein PH 99.3 8.2E-12 2.8E-16 122.7 12.5 125 23-149 209-338 (396)
176 1ne2_A Hypothetical protein TA 99.3 2.2E-11 7.5E-16 107.6 13.9 101 30-149 50-150 (200)
177 3sso_A Methyltransferase; macr 99.3 3.5E-12 1.2E-16 125.1 9.5 107 24-145 209-323 (419)
178 1r18_A Protein-L-isoaspartate( 99.3 5.4E-12 1.8E-16 114.0 10.0 104 29-148 82-196 (227)
179 3lst_A CALO1 methyltransferase 99.3 9.3E-12 3.2E-16 120.1 11.8 110 24-147 176-287 (348)
180 3c3p_A Methyltransferase; NP_9 99.3 4E-12 1.4E-16 113.4 8.5 102 31-145 56-159 (210)
181 3bzb_A Uncharacterized protein 99.3 2.5E-11 8.4E-16 113.9 14.3 111 30-145 78-204 (281)
182 3q87_B N6 adenine specific DNA 99.3 5.3E-12 1.8E-16 109.5 9.0 99 30-149 22-126 (170)
183 3lec_A NADB-rossmann superfami 99.3 2.3E-11 7.9E-16 111.2 13.4 121 24-156 14-136 (230)
184 1ixk_A Methyltransferase; open 99.3 8.2E-12 2.8E-16 119.2 10.8 112 30-148 117-248 (315)
185 2hnk_A SAM-dependent O-methylt 99.3 1.3E-11 4.5E-16 112.4 11.5 107 31-146 60-181 (239)
186 3ajd_A Putative methyltransfer 99.3 4.6E-12 1.6E-16 118.5 8.3 116 30-148 82-213 (274)
187 3r3h_A O-methyltransferase, SA 99.3 1.5E-12 5.1E-17 119.8 4.8 106 31-145 60-169 (242)
188 2zfu_A Nucleomethylin, cerebra 99.3 3.9E-12 1.3E-16 113.5 7.2 88 30-148 66-153 (215)
189 3gnl_A Uncharacterized protein 99.3 3.1E-11 1E-15 111.3 13.4 122 24-157 14-137 (244)
190 3kr9_A SAM-dependent methyltra 99.3 2.9E-11 1E-15 110.2 13.0 121 24-156 8-130 (225)
191 3adn_A Spermidine synthase; am 99.3 2.9E-11 9.9E-16 114.5 13.3 110 30-146 82-198 (294)
192 1o54_A SAM-dependent O-methylt 99.3 1.5E-11 5.1E-16 114.6 11.0 108 29-152 110-219 (277)
193 1wy7_A Hypothetical protein PH 99.3 6.4E-11 2.2E-15 104.9 14.6 105 30-149 48-152 (207)
194 3bwc_A Spermidine synthase; SA 99.3 8.7E-12 3E-16 118.5 9.5 113 30-148 94-212 (304)
195 3reo_A (ISO)eugenol O-methyltr 99.3 2.3E-11 7.8E-16 118.5 12.3 98 30-146 202-300 (368)
196 2nyu_A Putative ribosomal RNA 99.3 1.6E-11 5.3E-16 107.7 10.0 110 29-150 20-149 (196)
197 3tm4_A TRNA (guanine N2-)-meth 99.3 2.8E-11 9.7E-16 118.1 12.8 120 29-156 215-339 (373)
198 3p9c_A Caffeic acid O-methyltr 99.3 3E-11 1E-15 117.5 12.8 103 24-145 192-297 (364)
199 3hp7_A Hemolysin, putative; st 99.3 4.1E-12 1.4E-16 120.2 6.3 99 31-145 85-184 (291)
200 3c0k_A UPF0064 protein YCCW; P 99.3 2.7E-11 9.2E-16 119.1 12.4 122 25-149 215-342 (396)
201 1fp1_D Isoliquiritigenin 2'-O- 99.3 2.1E-11 7.1E-16 118.7 11.4 104 23-145 199-305 (372)
202 1sui_A Caffeoyl-COA O-methyltr 99.2 2.6E-11 9E-16 111.7 11.1 106 31-145 79-189 (247)
203 3a27_A TYW2, uncharacterized p 99.2 2.4E-11 8.2E-16 113.5 10.8 104 28-147 116-220 (272)
204 4dmg_A Putative uncharacterize 99.2 2.3E-11 7.9E-16 119.8 11.0 120 22-149 205-329 (393)
205 3cbg_A O-methyltransferase; cy 99.2 3.5E-11 1.2E-15 109.5 11.2 107 31-146 72-182 (232)
206 1zq9_A Probable dimethyladenos 99.2 2.5E-11 8.5E-16 114.3 10.4 104 29-144 26-145 (285)
207 3dou_A Ribosomal RNA large sub 99.2 2.8E-11 9.6E-16 107.3 10.2 108 29-149 23-142 (191)
208 2bm8_A Cephalosporin hydroxyla 99.2 1.1E-11 3.9E-16 113.4 7.8 101 31-146 81-187 (236)
209 2h00_A Methyltransferase 10 do 99.2 1.7E-11 5.7E-16 112.5 8.7 114 31-145 65-191 (254)
210 2avd_A Catechol-O-methyltransf 99.2 3.5E-11 1.2E-15 108.3 10.6 106 31-145 69-178 (229)
211 4a6d_A Hydroxyindole O-methylt 99.2 8.6E-11 2.9E-15 113.8 13.5 103 31-145 179-282 (353)
212 3c3y_A Pfomt, O-methyltransfer 99.2 5.7E-11 2E-15 108.6 11.6 107 31-146 70-181 (237)
213 2oxt_A Nucleoside-2'-O-methylt 99.2 6.9E-12 2.4E-16 117.1 5.2 112 27-150 70-191 (265)
214 1fp2_A Isoflavone O-methyltran 99.2 3.6E-11 1.2E-15 116.0 10.2 98 30-146 187-288 (352)
215 3opn_A Putative hemolysin; str 99.2 2.9E-11 9.8E-16 110.7 8.8 100 31-146 37-137 (232)
216 1inl_A Spermidine synthase; be 99.2 1.9E-11 6.6E-16 115.7 7.9 113 30-148 89-207 (296)
217 3v97_A Ribosomal RNA large sub 99.2 4.8E-11 1.6E-15 125.6 11.6 113 31-148 539-659 (703)
218 2f8l_A Hypothetical protein LM 99.2 8E-11 2.7E-15 113.4 12.2 109 31-149 130-259 (344)
219 1wxx_A TT1595, hypothetical pr 99.2 3.3E-11 1.1E-15 118.0 9.6 120 24-149 204-328 (382)
220 2ld4_A Anamorsin; methyltransf 99.2 6.2E-12 2.1E-16 108.9 3.5 93 29-147 10-102 (176)
221 4azs_A Methyltransferase WBDD; 99.2 1.6E-11 5.6E-16 126.3 7.2 117 27-151 62-179 (569)
222 1mjf_A Spermidine synthase; sp 99.2 2.2E-11 7.5E-16 114.4 7.4 108 30-146 74-193 (281)
223 2o07_A Spermidine synthase; st 99.2 3.7E-11 1.3E-15 114.3 8.9 112 30-146 94-209 (304)
224 1uir_A Polyamine aminopropyltr 99.2 3E-11 1E-15 115.3 8.1 112 30-146 76-195 (314)
225 2p41_A Type II methyltransfera 99.2 3.3E-11 1.1E-15 114.8 8.0 108 28-149 79-194 (305)
226 2qm3_A Predicted methyltransfe 99.2 2.7E-10 9.4E-15 111.0 14.5 105 31-147 172-279 (373)
227 1iy9_A Spermidine synthase; ro 99.2 2.8E-11 9.6E-16 113.4 7.1 114 30-148 74-191 (275)
228 2wa2_A Non-structural protein 99.2 7.8E-12 2.7E-16 117.5 3.3 109 28-148 79-195 (276)
229 3gjy_A Spermidine synthase; AP 99.2 5.2E-11 1.8E-15 113.8 8.7 111 32-147 90-201 (317)
230 1xj5_A Spermidine synthase 1; 99.2 7.1E-11 2.4E-15 113.9 9.2 113 30-146 119-235 (334)
231 3k6r_A Putative transferase PH 99.1 6.2E-11 2.1E-15 111.4 8.3 106 25-145 119-224 (278)
232 2pt6_A Spermidine synthase; tr 99.1 3E-11 1E-15 115.8 6.3 112 30-148 115-232 (321)
233 2yxl_A PH0851 protein, 450AA l 99.1 2.5E-10 8.6E-15 114.2 12.8 114 30-148 258-391 (450)
234 2b2c_A Spermidine synthase; be 99.1 1E-10 3.5E-15 111.8 9.2 110 30-146 107-222 (314)
235 1zg3_A Isoflavanone 4'-O-methy 99.1 2.2E-10 7.5E-15 110.8 11.7 97 31-146 193-293 (358)
236 2i7c_A Spermidine synthase; tr 99.1 3.9E-11 1.3E-15 112.9 6.2 112 30-148 77-194 (283)
237 3m6w_A RRNA methylase; rRNA me 99.1 6.9E-11 2.3E-15 118.6 7.8 112 30-148 100-231 (464)
238 1sqg_A SUN protein, FMU protei 99.1 2.5E-10 8.6E-15 113.4 11.8 113 30-148 245-376 (429)
239 3frh_A 16S rRNA methylase; met 99.1 3.4E-10 1.2E-14 103.8 11.4 102 30-145 104-205 (253)
240 2yx1_A Hypothetical protein MJ 99.1 2E-10 6.8E-15 110.6 10.2 111 27-156 191-303 (336)
241 2frx_A Hypothetical protein YE 99.1 3.5E-10 1.2E-14 114.1 11.2 112 31-148 117-248 (479)
242 2h1r_A Dimethyladenosine trans 99.1 7.3E-10 2.5E-14 105.0 12.4 79 29-117 40-118 (299)
243 3m4x_A NOL1/NOP2/SUN family pr 99.1 2.7E-10 9.3E-15 114.0 9.7 113 30-148 104-236 (456)
244 3lcv_B Sisomicin-gentamicin re 99.1 1.4E-10 5E-15 107.4 6.9 104 30-145 131-235 (281)
245 3ldu_A Putative methylase; str 99.0 1.2E-09 4.2E-14 107.1 11.7 114 30-150 194-348 (385)
246 3ldg_A Putative uncharacterize 99.0 3.3E-09 1.1E-13 104.0 14.7 115 29-150 192-347 (384)
247 3k0b_A Predicted N6-adenine-sp 99.0 1.9E-09 6.6E-14 106.0 12.1 115 29-150 199-354 (393)
248 2ih2_A Modification methylase 99.0 1E-09 3.5E-14 107.8 9.3 102 31-149 39-167 (421)
249 2cmg_A Spermidine synthase; tr 99.0 9.7E-10 3.3E-14 102.3 8.1 100 30-148 71-173 (262)
250 2jjq_A Uncharacterized RNA met 99.0 5.2E-09 1.8E-13 103.9 13.6 109 29-156 288-396 (425)
251 2okc_A Type I restriction enzy 98.9 1.2E-09 4.1E-14 109.0 8.6 112 31-149 171-310 (445)
252 1uwv_A 23S rRNA (uracil-5-)-me 98.9 1.9E-08 6.5E-13 100.0 16.3 114 30-156 285-398 (433)
253 3gru_A Dimethyladenosine trans 98.9 1E-08 3.6E-13 97.0 13.3 79 29-117 48-126 (295)
254 2qfm_A Spermine synthase; sper 98.9 1.5E-08 5E-13 98.3 13.5 125 31-157 188-327 (364)
255 1qam_A ERMC' methyltransferase 98.9 5.8E-09 2E-13 95.8 10.2 77 30-116 29-105 (244)
256 3bt7_A TRNA (uracil-5-)-methyl 98.9 1.5E-08 5.1E-13 98.6 13.0 113 31-157 213-337 (369)
257 2dul_A N(2),N(2)-dimethylguano 98.9 1.1E-08 3.9E-13 100.0 11.8 105 31-149 47-167 (378)
258 1yub_A Ermam, rRNA methyltrans 98.9 3.1E-10 1.1E-14 104.1 0.4 104 30-146 28-145 (245)
259 2xyq_A Putative 2'-O-methyl tr 98.9 3.9E-09 1.3E-13 99.7 7.9 97 29-148 61-173 (290)
260 3fut_A Dimethyladenosine trans 98.8 2.5E-08 8.6E-13 93.2 12.0 89 29-131 45-133 (271)
261 2b9e_A NOL1/NOP2/SUN domain fa 98.8 2.3E-08 7.9E-13 95.2 11.9 114 30-148 101-236 (309)
262 3axs_A Probable N(2),N(2)-dime 98.8 1.3E-08 4.6E-13 99.9 9.1 107 31-150 52-162 (392)
263 3tqs_A Ribosomal RNA small sub 98.7 6.8E-08 2.3E-12 89.5 11.9 79 29-114 27-105 (255)
264 2ar0_A M.ecoki, type I restric 98.7 3.9E-08 1.3E-12 100.5 9.7 114 31-149 169-315 (541)
265 3v97_A Ribosomal RNA large sub 98.7 1.5E-07 5E-12 99.1 13.1 118 30-151 189-352 (703)
266 3uzu_A Ribosomal RNA small sub 98.6 5.3E-07 1.8E-11 84.6 14.2 63 29-96 40-105 (279)
267 2r6z_A UPF0341 protein in RSP 98.6 3.2E-08 1.1E-12 91.9 5.2 84 31-117 83-173 (258)
268 3ftd_A Dimethyladenosine trans 98.6 2.2E-07 7.4E-12 85.7 10.5 63 29-96 29-91 (249)
269 1qyr_A KSGA, high level kasuga 98.6 2.1E-07 7.2E-12 86.0 10.3 80 29-115 19-100 (252)
270 1m6y_A S-adenosyl-methyltransf 98.6 3E-07 1E-11 87.2 11.5 82 29-114 24-107 (301)
271 3khk_A Type I restriction-modi 98.6 1.1E-07 3.7E-12 97.3 8.4 113 32-149 245-398 (544)
272 3evf_A RNA-directed RNA polyme 98.5 3.1E-07 1.1E-11 85.4 9.9 112 28-148 71-186 (277)
273 3b5i_A S-adenosyl-L-methionine 98.5 6.7E-07 2.3E-11 87.2 11.6 46 102-147 147-226 (374)
274 3lkd_A Type I restriction-modi 98.5 4.9E-07 1.7E-11 92.3 10.9 116 31-149 221-361 (542)
275 3ll7_A Putative methyltransfer 98.5 1.7E-07 5.8E-12 92.5 7.2 79 29-113 91-171 (410)
276 3s1s_A Restriction endonucleas 98.4 1.9E-06 6.5E-11 90.8 13.6 115 30-149 320-468 (878)
277 3cvo_A Methyltransferase-like 98.4 3.5E-06 1.2E-10 75.2 13.0 104 31-145 30-153 (202)
278 4gqb_A Protein arginine N-meth 98.3 8.6E-07 2.9E-11 91.8 8.8 102 32-143 358-464 (637)
279 2efj_A 3,7-dimethylxanthine me 98.3 3.1E-06 1.1E-10 82.7 11.7 111 32-148 53-227 (384)
280 3gcz_A Polyprotein; flavivirus 98.3 7.9E-07 2.7E-11 82.8 7.0 112 28-148 87-203 (282)
281 3ua3_A Protein arginine N-meth 98.3 1.3E-06 4.5E-11 90.7 9.2 108 32-143 410-531 (745)
282 3c6k_A Spermine synthase; sper 98.2 5.5E-06 1.9E-10 80.6 11.4 126 30-157 204-344 (381)
283 3o4f_A Spermidine synthase; am 98.2 2.8E-06 9.6E-11 80.1 8.7 111 30-145 82-197 (294)
284 4fzv_A Putative methyltransfer 98.2 5.4E-06 1.8E-10 80.4 10.3 115 30-149 147-287 (359)
285 2oyr_A UPF0341 protein YHIQ; a 98.2 8.3E-07 2.8E-11 82.3 3.4 114 30-157 85-208 (258)
286 1m6e_X S-adenosyl-L-methionnin 98.1 2E-06 6.9E-11 83.3 5.2 111 31-147 51-210 (359)
287 2k4m_A TR8_protein, UPF0146 pr 98.0 6.4E-06 2.2E-10 69.6 5.4 87 30-146 34-121 (153)
288 3eld_A Methyltransferase; flav 98.0 2.7E-05 9.2E-10 73.0 9.5 113 27-148 77-193 (300)
289 2qy6_A UPF0209 protein YFCK; s 97.9 2.4E-05 8.2E-10 72.4 8.0 122 31-158 60-224 (257)
290 1wg8_A Predicted S-adenosylmet 97.9 4.7E-05 1.6E-09 71.1 9.9 77 29-113 20-97 (285)
291 3ufb_A Type I restriction-modi 97.8 0.00014 4.9E-09 73.9 12.2 116 31-149 217-365 (530)
292 2zig_A TTHA0409, putative modi 97.7 9.5E-05 3.2E-09 69.4 9.5 54 23-77 227-280 (297)
293 2wk1_A NOVP; transferase, O-me 97.7 0.00028 9.7E-09 66.0 12.1 107 31-147 106-245 (282)
294 4auk_A Ribosomal RNA large sub 97.7 0.00024 8.3E-09 68.8 11.3 95 27-141 207-301 (375)
295 3lkz_A Non-structural protein 97.7 0.00023 7.8E-09 66.6 10.6 118 28-157 91-217 (321)
296 3p8z_A Mtase, non-structural p 97.5 0.00062 2.1E-08 61.8 10.4 117 28-157 75-199 (267)
297 2px2_A Genome polyprotein [con 97.5 7.3E-05 2.5E-09 68.7 4.0 113 28-154 70-193 (269)
298 3r24_A NSP16, 2'-O-methyl tran 97.4 0.00022 7.5E-09 66.7 6.3 112 16-149 87-220 (344)
299 1g60_A Adenine-specific methyl 97.2 0.00098 3.3E-08 61.2 8.2 55 22-77 203-257 (260)
300 2vz8_A Fatty acid synthase; tr 97.1 0.00019 6.7E-09 84.8 3.8 104 30-147 1239-1349(2512)
301 1rjd_A PPM1P, carboxy methyl t 97.0 0.0065 2.2E-07 58.0 12.8 112 30-145 96-231 (334)
302 3tka_A Ribosomal RNA small sub 97.0 0.0011 3.7E-08 63.4 7.0 77 30-113 56-136 (347)
303 2uyo_A Hypothetical protein ML 96.6 0.047 1.6E-06 51.5 14.8 110 33-148 104-220 (310)
304 3g7u_A Cytosine-specific methy 96.4 0.016 5.6E-07 56.1 10.8 78 33-116 3-82 (376)
305 1g55_A DNA cytosine methyltran 96.0 0.012 4E-07 56.3 7.4 77 32-117 2-80 (343)
306 2c7p_A Modification methylase 95.6 0.027 9.4E-07 53.5 8.0 72 32-116 11-82 (327)
307 1i4w_A Mitochondrial replicati 95.4 0.033 1.1E-06 53.5 7.9 59 32-94 59-118 (353)
308 1boo_A Protein (N-4 cytosine-s 95.4 0.024 8.3E-07 53.6 6.8 55 22-77 243-297 (323)
309 3qv2_A 5-cytosine DNA methyltr 95.2 0.039 1.3E-06 52.5 7.4 77 31-117 9-88 (327)
310 1eg2_A Modification methylase 95.2 0.04 1.4E-06 52.1 7.4 55 22-77 233-290 (319)
311 2oo3_A Protein involved in cat 95.0 0.0084 2.9E-07 55.9 2.1 107 32-148 92-200 (283)
312 3ubt_Y Modification methylase 94.8 0.063 2.1E-06 50.4 7.7 72 33-116 1-72 (331)
313 2qrv_A DNA (cytosine-5)-methyl 94.6 0.11 3.7E-06 48.6 8.7 77 31-115 15-93 (295)
314 3tos_A CALS11; methyltransfera 94.4 0.34 1.2E-05 44.4 11.2 119 23-148 61-219 (257)
315 3fwz_A Inner membrane protein 94.3 0.31 1.1E-05 39.6 10.0 103 32-151 7-110 (140)
316 3s2e_A Zinc-containing alcohol 94.2 0.13 4.4E-06 48.4 8.4 98 29-145 164-262 (340)
317 4h0n_A DNMT2; SAH binding, tra 94.1 0.069 2.4E-06 50.8 6.1 73 33-114 4-78 (333)
318 1v3u_A Leukotriene B4 12- hydr 93.9 0.18 6.1E-06 47.2 8.7 97 29-145 143-243 (333)
319 1f8f_A Benzyl alcohol dehydrog 93.7 0.21 7.3E-06 47.5 9.0 98 29-145 188-288 (371)
320 1pqw_A Polyketide synthase; ro 93.6 0.15 5E-06 43.9 7.0 97 29-145 36-136 (198)
321 4b7c_A Probable oxidoreductase 92.7 0.26 8.9E-06 46.1 7.8 98 29-145 147-247 (336)
322 2j3h_A NADP-dependent oxidored 92.6 0.26 8.9E-06 46.2 7.5 98 29-145 153-254 (345)
323 2dph_A Formaldehyde dismutase; 92.6 0.21 7.1E-06 48.2 6.9 106 29-145 183-298 (398)
324 1rjw_A ADH-HT, alcohol dehydro 92.4 0.74 2.5E-05 43.1 10.4 99 28-145 161-260 (339)
325 3gms_A Putative NADPH:quinone 92.1 0.32 1.1E-05 45.6 7.6 97 29-145 142-242 (340)
326 3me5_A Cytosine-specific methy 92.0 0.17 5.7E-06 50.7 5.5 82 32-116 88-180 (482)
327 3m6i_A L-arabinitol 4-dehydrog 91.9 0.85 2.9E-05 43.1 10.4 101 29-145 177-282 (363)
328 2eih_A Alcohol dehydrogenase; 91.8 0.7 2.4E-05 43.4 9.5 97 29-145 164-264 (343)
329 3vyw_A MNMC2; tRNA wobble urid 91.7 0.56 1.9E-05 44.1 8.6 117 31-157 96-236 (308)
330 1pl8_A Human sorbitol dehydrog 91.7 0.46 1.6E-05 44.9 8.2 100 29-145 169-272 (356)
331 1e3j_A NADP(H)-dependent ketos 91.7 0.78 2.7E-05 43.2 9.7 98 29-145 166-270 (352)
332 4ej6_A Putative zinc-binding d 91.4 0.8 2.7E-05 43.6 9.5 98 29-145 180-283 (370)
333 2py6_A Methyltransferase FKBM; 91.3 0.56 1.9E-05 45.6 8.5 62 30-91 225-292 (409)
334 3llv_A Exopolyphosphatase-rela 91.3 1.4 4.8E-05 35.3 9.7 101 32-150 6-107 (141)
335 3uog_A Alcohol dehydrogenase; 91.3 0.56 1.9E-05 44.5 8.3 97 29-145 187-286 (363)
336 3fpc_A NADP-dependent alcohol 91.2 0.48 1.6E-05 44.7 7.7 98 29-145 164-265 (352)
337 1uuf_A YAHK, zinc-type alcohol 91.0 0.58 2E-05 44.6 8.1 95 29-145 192-287 (369)
338 3ip1_A Alcohol dehydrogenase, 90.7 1.7 5.8E-05 41.8 11.3 103 29-145 211-317 (404)
339 1kol_A Formaldehyde dehydrogen 90.7 0.64 2.2E-05 44.6 8.2 107 29-145 183-299 (398)
340 1jvb_A NAD(H)-dependent alcoho 90.5 0.67 2.3E-05 43.6 7.9 98 29-145 168-270 (347)
341 1wly_A CAAR, 2-haloacrylate re 90.4 1.2 4.1E-05 41.5 9.6 97 29-145 143-243 (333)
342 3l9w_A Glutathione-regulated p 90.3 1.3 4.4E-05 43.2 10.0 104 32-152 4-108 (413)
343 2j8z_A Quinone oxidoreductase; 90.3 0.84 2.9E-05 43.1 8.5 97 29-145 160-260 (354)
344 2d8a_A PH0655, probable L-thre 90.3 1 3.4E-05 42.3 9.0 96 31-145 167-266 (348)
345 3c85_A Putative glutathione-re 90.2 1.6 5.3E-05 36.8 9.3 103 32-150 39-143 (183)
346 3two_A Mannitol dehydrogenase; 90.1 0.77 2.6E-05 43.1 8.0 91 28-145 173-264 (348)
347 1qor_A Quinone oxidoreductase; 90.1 0.82 2.8E-05 42.5 8.1 97 29-145 138-238 (327)
348 3jyn_A Quinone oxidoreductase; 89.8 0.83 2.8E-05 42.5 7.9 97 29-145 138-238 (325)
349 2zb4_A Prostaglandin reductase 89.7 0.76 2.6E-05 43.3 7.6 98 29-145 156-259 (357)
350 2hcy_A Alcohol dehydrogenase 1 89.4 0.78 2.7E-05 43.1 7.4 98 29-145 167-268 (347)
351 2c0c_A Zinc binding alcohol de 89.4 1.3 4.3E-05 42.0 9.0 97 29-145 161-260 (362)
352 3qwb_A Probable quinone oxidor 89.2 1.1 3.8E-05 41.7 8.3 97 29-145 146-246 (334)
353 1yb5_A Quinone oxidoreductase; 89.2 0.68 2.3E-05 43.8 6.9 97 29-145 168-268 (351)
354 1piw_A Hypothetical zinc-type 89.0 0.37 1.3E-05 45.6 4.9 97 29-145 177-275 (360)
355 1p0f_A NADP-dependent alcohol 88.1 1.9 6.4E-05 40.9 9.2 98 29-145 189-292 (373)
356 1vj0_A Alcohol dehydrogenase, 88.1 1.1 3.6E-05 42.9 7.5 100 29-145 193-297 (380)
357 2dq4_A L-threonine 3-dehydroge 88.1 0.63 2.1E-05 43.7 5.7 95 31-145 164-261 (343)
358 2h6e_A ADH-4, D-arabinose 1-de 88.1 0.64 2.2E-05 43.7 5.8 95 31-145 170-268 (344)
359 2b5w_A Glucose dehydrogenase; 87.9 1.1 3.9E-05 42.2 7.5 92 33-145 174-272 (357)
360 4dvj_A Putative zinc-dependent 87.8 2 7E-05 40.6 9.3 95 31-145 171-269 (363)
361 1cdo_A Alcohol dehydrogenase; 87.7 2 6.9E-05 40.6 9.1 98 29-145 190-293 (374)
362 2fzw_A Alcohol dehydrogenase c 87.4 2.4 8.2E-05 40.0 9.5 98 29-145 188-291 (373)
363 4eye_A Probable oxidoreductase 87.3 1.2 4.1E-05 41.8 7.2 96 29-145 157-256 (342)
364 3jv7_A ADH-A; dehydrogenase, n 87.2 1.2 4E-05 41.7 7.1 98 28-145 168-269 (345)
365 2jhf_A Alcohol dehydrogenase E 87.0 1.9 6.6E-05 40.8 8.6 98 29-145 189-292 (374)
366 2cdc_A Glucose dehydrogenase g 87.0 1.4 4.7E-05 41.7 7.5 92 32-145 181-277 (366)
367 2zig_A TTHA0409, putative modi 86.8 0.51 1.8E-05 43.6 4.3 64 82-149 21-100 (297)
368 1iz0_A Quinone oxidoreductase; 86.6 0.69 2.4E-05 42.5 5.0 92 29-145 123-217 (302)
369 3fbg_A Putative arginate lyase 86.3 2.8 9.6E-05 39.2 9.2 95 31-145 150-247 (346)
370 3pxx_A Carveol dehydrogenase; 86.2 9.9 0.00034 33.9 12.6 113 31-146 9-153 (287)
371 1lss_A TRK system potassium up 85.9 7.8 0.00027 30.2 10.5 100 32-148 4-104 (140)
372 4eso_A Putative oxidoreductase 85.7 8.4 0.00029 34.1 11.8 109 31-145 7-137 (255)
373 1e3i_A Alcohol dehydrogenase, 85.6 3 0.0001 39.4 9.1 98 29-145 193-296 (376)
374 1id1_A Putative potassium chan 85.5 6.5 0.00022 31.8 10.1 104 32-149 3-108 (153)
375 3uko_A Alcohol dehydrogenase c 85.4 2.2 7.5E-05 40.5 8.0 98 29-145 191-294 (378)
376 4dup_A Quinone oxidoreductase; 85.2 2.5 8.4E-05 39.8 8.2 97 29-145 165-264 (353)
377 3goh_A Alcohol dehydrogenase, 85.0 1.2 4.2E-05 41.1 5.9 89 29-146 140-229 (315)
378 3l4b_C TRKA K+ channel protien 85.0 4.9 0.00017 34.8 9.6 100 34-149 2-102 (218)
379 3oig_A Enoyl-[acyl-carrier-pro 85.0 14 0.00046 32.7 12.8 115 31-146 6-147 (266)
380 3ijr_A Oxidoreductase, short c 84.3 13 0.00046 33.5 12.6 113 31-146 46-182 (291)
381 3v2g_A 3-oxoacyl-[acyl-carrier 83.9 14 0.00048 33.1 12.5 135 8-145 7-164 (271)
382 4eez_A Alcohol dehydrogenase 1 82.9 6.1 0.00021 36.6 9.8 98 29-145 161-262 (348)
383 3pvc_A TRNA 5-methylaminomethy 82.9 3.2 0.00011 42.9 8.5 120 31-158 58-222 (689)
384 3k31_A Enoyl-(acyl-carrier-pro 82.6 12 0.00041 34.0 11.6 112 32-146 30-168 (296)
385 2g1u_A Hypothetical protein TM 82.4 3.2 0.00011 33.9 6.9 103 31-150 18-122 (155)
386 3ioy_A Short-chain dehydrogena 81.5 17 0.00057 33.4 12.3 84 31-115 7-97 (319)
387 3o26_A Salutaridine reductase; 81.3 15 0.0005 32.9 11.6 83 31-115 11-101 (311)
388 1yqd_A Sinapyl alcohol dehydro 81.2 2.3 8E-05 40.2 6.3 96 29-145 184-281 (366)
389 3ggo_A Prephenate dehydrogenas 81.0 15 0.00051 34.0 11.7 105 32-158 33-140 (314)
390 3r3s_A Oxidoreductase; structu 80.8 15 0.00052 33.2 11.6 112 31-145 48-184 (294)
391 3v8b_A Putative dehydrogenase, 80.8 11 0.00038 34.0 10.6 104 3-115 5-115 (283)
392 3gaz_A Alcohol dehydrogenase s 80.1 3.8 0.00013 38.3 7.3 94 29-145 148-245 (343)
393 4fn4_A Short chain dehydrogena 79.9 14 0.00049 33.2 10.8 82 31-115 6-94 (254)
394 4a2c_A Galactitol-1-phosphate 79.5 14 0.0005 34.0 11.2 98 29-145 158-259 (346)
395 3rkr_A Short chain oxidoreduct 79.3 27 0.00093 30.7 12.5 82 31-115 28-116 (262)
396 2cf5_A Atccad5, CAD, cinnamyl 79.2 2.1 7E-05 40.4 5.1 96 29-145 177-274 (357)
397 3ek2_A Enoyl-(acyl-carrier-pro 79.0 14 0.00046 32.6 10.4 113 31-146 13-153 (271)
398 1zkd_A DUF185; NESG, RPR58, st 79.0 4.9 0.00017 38.8 7.7 60 17-76 66-133 (387)
399 4g65_A TRK system potassium up 78.6 4.8 0.00016 39.7 7.8 71 32-111 3-74 (461)
400 3ps9_A TRNA 5-methylaminomethy 78.6 5.2 0.00018 41.1 8.4 120 31-158 66-230 (676)
401 3grk_A Enoyl-(acyl-carrier-pro 78.3 33 0.0011 30.9 13.0 113 31-146 30-169 (293)
402 1zcj_A Peroxisomal bifunctiona 78.2 19 0.00064 35.3 12.0 96 33-144 38-148 (463)
403 3nx4_A Putative oxidoreductase 77.8 2.9 0.0001 38.5 5.7 90 34-145 149-240 (324)
404 3o38_A Short chain dehydrogena 77.7 17 0.00058 32.0 10.6 84 31-115 21-111 (266)
405 3is3_A 17BETA-hydroxysteroid d 77.6 27 0.00092 30.9 12.0 113 31-146 17-152 (270)
406 3t4x_A Oxidoreductase, short c 77.4 10 0.00036 33.7 9.1 84 31-115 9-95 (267)
407 4fgs_A Probable dehydrogenase 77.1 10 0.00034 34.7 9.0 109 31-145 28-158 (273)
408 1wma_A Carbonyl reductase [NAD 76.6 24 0.00082 30.7 11.3 114 31-146 3-138 (276)
409 3u5t_A 3-oxoacyl-[acyl-carrier 76.0 13 0.00044 33.2 9.4 126 18-146 13-161 (267)
410 2vn8_A Reticulon-4-interacting 75.6 9 0.00031 36.1 8.5 98 29-146 181-280 (375)
411 2gdz_A NAD+-dependent 15-hydro 75.4 34 0.0012 30.0 12.1 83 32-115 7-96 (267)
412 4fs3_A Enoyl-[acyl-carrier-pro 75.4 39 0.0013 29.8 12.4 113 31-145 5-145 (256)
413 3tqh_A Quinone oxidoreductase; 75.2 11 0.00036 34.7 8.7 92 29-145 150-244 (321)
414 3swr_A DNA (cytosine-5)-methyl 74.9 3.2 0.00011 45.1 5.6 54 31-90 539-593 (1002)
415 3sx2_A Putative 3-ketoacyl-(ac 74.7 23 0.00078 31.4 10.7 83 31-116 12-113 (278)
416 4e6p_A Probable sorbitol dehyd 74.5 35 0.0012 29.9 11.8 79 31-115 7-92 (259)
417 3iei_A Leucine carboxyl methyl 74.3 57 0.002 30.5 23.7 191 9-246 61-287 (334)
418 3g0o_A 3-hydroxyisobutyrate de 73.9 20 0.00067 32.7 10.2 91 32-146 7-102 (303)
419 3gvc_A Oxidoreductase, probabl 73.9 32 0.0011 30.7 11.6 79 31-115 28-113 (277)
420 4e12_A Diketoreductase; oxidor 73.4 7.6 0.00026 35.2 7.1 95 33-143 5-118 (283)
421 1iy8_A Levodione reductase; ox 73.3 44 0.0015 29.4 12.2 84 31-115 12-102 (267)
422 1xa0_A Putative NADPH dependen 73.2 2.7 9.3E-05 38.8 4.1 95 29-145 146-245 (328)
423 3l6e_A Oxidoreductase, short-c 72.8 43 0.0015 28.9 11.8 78 32-115 3-87 (235)
424 4ft4_B DNA (cytosine-5)-methyl 72.8 3.6 0.00012 43.2 5.4 45 31-75 211-261 (784)
425 3ucx_A Short chain dehydrogena 72.6 24 0.00082 31.2 10.2 82 31-115 10-98 (264)
426 3lf2_A Short chain oxidoreduct 72.6 30 0.001 30.5 10.9 84 31-115 7-97 (265)
427 1boo_A Protein (N-4 cytosine-s 72.5 2.4 8.4E-05 39.6 3.6 64 82-149 14-87 (323)
428 4dcm_A Ribosomal RNA large sub 72.3 49 0.0017 31.3 12.9 112 21-150 26-140 (375)
429 3qiv_A Short-chain dehydrogena 72.3 32 0.0011 29.9 10.9 82 31-115 8-96 (253)
430 1xg5_A ARPG836; short chain de 72.1 45 0.0015 29.4 12.0 84 32-115 32-121 (279)
431 4da9_A Short-chain dehydrogena 71.7 43 0.0015 29.9 11.9 82 31-115 28-117 (280)
432 3h7a_A Short chain dehydrogena 71.5 15 0.00052 32.3 8.6 81 31-115 6-93 (252)
433 3edm_A Short chain dehydrogena 71.4 21 0.00072 31.5 9.5 112 31-145 7-142 (259)
434 3uve_A Carveol dehydrogenase ( 71.3 31 0.0011 30.7 10.8 82 31-115 10-114 (286)
435 2aef_A Calcium-gated potassium 71.1 13 0.00045 32.3 8.0 101 32-151 9-110 (234)
436 4dkj_A Cytosine-specific methy 70.5 4.7 0.00016 39.1 5.2 44 32-75 10-59 (403)
437 3tjr_A Short chain dehydrogena 70.3 18 0.00062 32.8 9.0 82 31-115 30-118 (301)
438 2ew2_A 2-dehydropantoate 2-red 70.3 25 0.00086 31.5 10.0 99 33-145 4-107 (316)
439 3iht_A S-adenosyl-L-methionine 69.9 10 0.00034 32.1 6.3 130 7-145 14-146 (174)
440 2cvz_A Dehydrogenase, 3-hydrox 69.8 37 0.0013 30.1 10.9 86 34-145 3-89 (289)
441 2dpo_A L-gulonate 3-dehydrogen 69.5 11 0.00038 35.1 7.4 95 33-143 7-120 (319)
442 4g81_D Putative hexonate dehyd 69.4 13 0.00043 33.6 7.6 83 31-116 8-97 (255)
443 3rku_A Oxidoreductase YMR226C; 69.3 34 0.0012 30.8 10.6 85 31-115 32-125 (287)
444 1e7w_A Pteridine reductase; di 69.2 26 0.00088 31.5 9.8 60 32-94 9-73 (291)
445 1zem_A Xylitol dehydrogenase; 69.1 56 0.0019 28.6 11.9 81 32-115 7-94 (262)
446 3t7c_A Carveol dehydrogenase; 69.0 37 0.0013 30.6 10.9 82 31-115 27-127 (299)
447 3krt_A Crotonyl COA reductase; 68.8 8.2 0.00028 37.6 6.6 97 29-145 226-343 (456)
448 3svt_A Short-chain type dehydr 68.5 47 0.0016 29.4 11.4 84 31-115 10-101 (281)
449 1tt7_A YHFP; alcohol dehydroge 68.1 3.8 0.00013 37.8 3.9 96 29-145 147-246 (330)
450 4f3n_A Uncharacterized ACR, CO 67.7 13 0.00045 36.4 7.7 58 16-76 125-188 (432)
451 2g5c_A Prephenate dehydrogenas 67.6 35 0.0012 30.3 10.3 90 33-145 2-95 (281)
452 3qha_A Putative oxidoreductase 67.3 25 0.00084 31.9 9.3 89 33-146 16-105 (296)
453 1g0o_A Trihydroxynaphthalene r 67.0 65 0.0022 28.5 12.0 112 31-145 28-162 (283)
454 3f9i_A 3-oxoacyl-[acyl-carrier 66.5 23 0.00079 30.7 8.6 79 31-115 13-94 (249)
455 2x9g_A PTR1, pteridine reducta 66.5 42 0.0014 29.9 10.6 82 31-115 22-116 (288)
456 2f1k_A Prephenate dehydrogenas 66.4 32 0.0011 30.5 9.7 86 34-144 2-89 (279)
457 3nyw_A Putative oxidoreductase 66.3 25 0.00085 30.9 8.8 84 31-115 6-97 (250)
458 3pi7_A NADH oxidoreductase; gr 66.2 12 0.0004 34.8 6.9 93 33-145 166-262 (349)
459 1sby_A Alcohol dehydrogenase; 66.1 65 0.0022 27.8 12.0 80 32-115 5-94 (254)
460 1xq1_A Putative tropinone redu 66.0 59 0.002 28.3 11.3 83 31-115 13-102 (266)
461 2h78_A Hibadh, 3-hydroxyisobut 65.9 38 0.0013 30.5 10.3 88 33-145 4-96 (302)
462 3ado_A Lambda-crystallin; L-gu 65.6 14 0.00049 34.5 7.3 96 32-143 6-120 (319)
463 2hwk_A Helicase NSP2; rossman 65.1 2.5 8.7E-05 39.2 1.9 45 104-148 205-256 (320)
464 2eez_A Alanine dehydrogenase; 65.1 9.7 0.00033 36.1 6.1 100 31-146 165-266 (369)
465 2hmt_A YUAA protein; RCK, KTN, 65.0 22 0.00075 27.6 7.5 101 32-149 6-107 (144)
466 4dll_A 2-hydroxy-3-oxopropiona 64.9 26 0.0009 32.2 9.0 92 32-148 31-126 (320)
467 3tfo_A Putative 3-oxoacyl-(acy 64.6 25 0.00086 31.3 8.6 81 32-115 4-91 (264)
468 3d1l_A Putative NADP oxidoredu 64.6 30 0.001 30.5 9.1 90 32-145 10-101 (266)
469 3ic5_A Putative saccharopine d 64.1 41 0.0014 24.9 8.6 72 32-114 5-78 (118)
470 4dry_A 3-oxoacyl-[acyl-carrier 63.9 43 0.0015 29.9 10.1 83 31-115 32-121 (281)
471 3lyl_A 3-oxoacyl-(acyl-carrier 63.8 40 0.0014 29.1 9.6 81 32-115 5-92 (247)
472 3pgx_A Carveol dehydrogenase; 63.6 58 0.002 28.8 10.9 82 31-115 14-115 (280)
473 1spx_A Short-chain reductase f 63.6 42 0.0015 29.6 10.0 83 32-115 6-96 (278)
474 4a0s_A Octenoyl-COA reductase/ 63.4 13 0.00045 35.9 6.9 102 29-145 218-335 (447)
475 3gqv_A Enoyl reductase; medium 63.4 21 0.0007 33.6 8.1 96 30-145 163-262 (371)
476 3gaf_A 7-alpha-hydroxysteroid 63.4 28 0.00096 30.6 8.6 82 31-115 11-99 (256)
477 2pd4_A Enoyl-[acyl-carrier-pro 63.3 49 0.0017 29.2 10.3 112 32-146 6-144 (275)
478 3c24_A Putative oxidoreductase 63.2 55 0.0019 29.2 10.7 85 33-143 12-98 (286)
479 3sju_A Keto reductase; short-c 62.8 31 0.0011 30.8 8.9 82 31-115 23-111 (279)
480 2zwa_A Leucine carboxyl methyl 62.6 1.4E+02 0.0048 30.5 18.7 116 82-245 189-314 (695)
481 3l77_A Short-chain alcohol deh 62.6 58 0.002 27.8 10.4 83 32-116 2-91 (235)
482 3ius_A Uncharacterized conserv 62.6 53 0.0018 28.8 10.4 95 33-145 6-101 (286)
483 4ibo_A Gluconate dehydrogenase 62.0 37 0.0013 30.2 9.2 82 31-115 25-113 (271)
484 1jw9_B Molybdopterin biosynthe 61.3 38 0.0013 30.0 9.1 78 32-113 31-129 (249)
485 1ja9_A 4HNR, 1,3,6,8-tetrahydr 61.2 32 0.0011 30.0 8.6 83 31-115 20-109 (274)
486 1mxh_A Pteridine reductase 2; 61.1 48 0.0016 29.2 9.8 83 32-115 11-104 (276)
487 1f0y_A HCDH, L-3-hydroxyacyl-C 60.7 36 0.0012 30.8 9.0 95 33-143 16-133 (302)
488 4dyv_A Short-chain dehydrogena 60.7 54 0.0019 29.1 10.1 79 31-115 27-112 (272)
489 3r1i_A Short-chain type dehydr 60.6 24 0.00082 31.6 7.7 82 31-115 31-119 (276)
490 3rd5_A Mypaa.01249.C; ssgcid, 60.4 31 0.0011 30.9 8.5 79 31-115 15-96 (291)
491 3f1l_A Uncharacterized oxidore 60.0 86 0.0029 27.2 12.6 83 31-115 11-102 (252)
492 1yb1_A 17-beta-hydroxysteroid 59.8 53 0.0018 28.9 9.9 83 31-115 30-118 (272)
493 4e3z_A Putative oxidoreductase 59.7 84 0.0029 27.5 11.2 82 31-115 25-114 (272)
494 1hdc_A 3-alpha, 20 beta-hydrox 59.5 73 0.0025 27.7 10.7 79 32-115 5-89 (254)
495 3h8v_A Ubiquitin-like modifier 59.4 32 0.0011 31.6 8.4 61 31-91 35-115 (292)
496 3nrc_A Enoyl-[acyl-carrier-pro 59.3 67 0.0023 28.4 10.5 82 31-116 25-114 (280)
497 3tzq_B Short-chain type dehydr 59.2 61 0.0021 28.6 10.2 79 31-115 10-95 (271)
498 2a4k_A 3-oxoacyl-[acyl carrier 59.1 79 0.0027 27.8 10.9 109 32-145 6-135 (263)
499 3av4_A DNA (cytosine-5)-methyl 59.1 9.9 0.00034 42.5 5.5 44 31-74 850-894 (1330)
500 3e8x_A Putative NAD-dependent 58.5 69 0.0024 27.2 10.2 72 31-115 20-94 (236)
No 1
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=100.00 E-value=5.2e-40 Score=314.03 Aligned_cols=260 Identities=17% Similarity=0.245 Sum_probs=193.3
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHHHHcCCC-------CCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHh
Q 018352 2 SVLPIPRSELTHHRLYEFAKTALIKIYSHP-------YVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTW 74 (357)
Q Consensus 2 ~~~~~~r~~~p~~~~~nwvks~Li~~~~~~-------~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~ 74 (357)
++|...|+++|+++++||+|+.+|+++++. +.+|||||||+|+++.+|+..+..+|+|+|+|+.||+.|++++
T Consensus 12 ~~f~~~r~~~~~~~~nn~vks~li~~~~~~~~~~~~~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~ 91 (302)
T 2vdw_A 12 SYFTNKRTRGPLGILSNYVKTLLISMYCSKTFLDDSNKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERY 91 (302)
T ss_dssp CCBCSSCCCHHHHHHHHHHHHHHHHHHTCTTTSSCCSCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHH
T ss_pred chhccccccchHHHHHHHHHHHHHHHHHhhhhhccCCCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHH
Confidence 688999999999999999999999998763 6899999999999999998877779999999999999999998
Q ss_pred HhcCCC-----ceeEEEEcCCCCCchhhhhh--hcCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeC
Q 018352 75 ENQRKN-----FIAEFFEADPCAENFETQMQ--EKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (357)
Q Consensus 75 ~~~~~~-----~~v~f~~~D~~~~~~~~~l~--~~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~p 147 (357)
...... ++++|.+.|+....+...+. .++++||+|+|++++||+|+++ +..+++++++++|||||+|++++|
T Consensus 92 ~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~~~FD~V~~~~~lhy~~~~~-~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 92 NKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYFGKFNIIDWQFAIHYSFHPR-HYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp HHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCSSCEEEEEEESCGGGTCSTT-THHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HhccccccccccccchhhhhcccchhhhhhhccccCCCeeEEEECchHHHhCCHH-HHHHHHHHHHHHcCCCCEEEEEeC
Confidence 765321 24678899986654432222 1357999999999999987655 357999999999999999999999
Q ss_pred CchHHHHHHHHhHHhhhcCCCCCCCCCCCCccCCccEE-EEeecccCCCCccceee--EeEEcCCcccCcccccchHHHH
Q 018352 148 DSSTIWAKYQKNVEAYHNRSSSMKPNLVPNCIRSESYV-ITFEVEEEKFPLFGKKY--QLKFANDISAETQCLVHFPSLI 224 (357)
Q Consensus 148 d~~~i~~~~~~~~~~~~~~~~~~~~~~fgn~i~~~~y~-i~f~~~~~~~p~fG~~Y--~f~L~~~~~~~~eylv~~~~l~ 224 (357)
+.+.+...+.+ .+. ..+++.+..+.|. +.. ++.+| .|...+...+++||+|+++.|+
T Consensus 171 ~~~~~~~~~~~-------~~~----~i~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~e~~v~~~el~ 230 (302)
T 2vdw_A 171 DGDKLSKLTDK-------KTF----IIHKNLPSSENYMSVEK---------IADDRIVVYNPSTMSTPMTEYIIKKNDIV 230 (302)
T ss_dssp CHHHHTTCCSC-------EEE----ECCSSSCTTTSEEEECE---------EETTEEEEBCTTTBSSCEEEECCCHHHHH
T ss_pred CHHHHHHHHhc-------CCc----ccccccccccceeeecc---------ccccccceeeccccCCCceeeeeEHHHHH
Confidence 98776532211 000 0122221111121 110 00111 1111222456789999999999
Q ss_pred HHHHHcCCEEEEecCchHHHHhhHHHHHHH--------------HHhcCCCCCCCCCCCChhHHHHHhhheeEEEEec
Q 018352 225 RLAREAGLEYVEIQNLNEFYDDNRALFAGM--------------LMSAGPNLIDPRGRLLPRSYDVLGLYSTFIFQKP 288 (357)
Q Consensus 225 ~la~e~Glelv~~~~f~~f~~~~~~~~~~~--------------~~~~~~~~~~~~g~l~~~e~e~~~lY~~f~F~K~ 288 (357)
++++++||++++..+|++||++++..+..| +.+++ .+.++++||||++||++|||+|.
T Consensus 231 ~l~~~~Gl~lv~~~~f~~~~~~~~~~~~~~~~le~~~~~~~~~~l~~~~------~~~~~~~~~e~~~lY~~f~F~K~ 302 (302)
T 2vdw_A 231 RVFNEYGFVLVDNVDFATIIERSKKFINGASTMEDRPSTRNFFELNRGA------IKCEGLDVEDLLSYYVVYVFSKR 302 (302)
T ss_dssp HHHHHTTEEEEEEEEHHHHHHHHHHHHHTGGGGCCCHHHHHHHHHHHHH------HHCCSCSHHHHHTTEEEEEEEEC
T ss_pred HHHHHCCCEEEEecChHHHHHHHHHHHHHhhhhhccCcccccccccccc------cccCCHhHHHHHhheEEEEEEEC
Confidence 999999999999999999999987644332 12221 13689999999999999999995
No 2
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=100.00 E-value=7.7e-37 Score=291.74 Aligned_cols=259 Identities=27% Similarity=0.484 Sum_probs=201.0
Q ss_pred HHHHHHHHHHHHHHHcCC-------CCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcC------C
Q 018352 13 HHRLYEFAKTALIKIYSH-------PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQR------K 79 (357)
Q Consensus 13 ~~~~~nwvks~Li~~~~~-------~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~------~ 79 (357)
.+.++||+|+.++..++. ++.+|||+|||+|.++..++..+..+|+|+|+|+.|++.|++++.... .
T Consensus 9 lr~~~~~~k~~l~~~~~~~l~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~ 88 (313)
T 3bgv_A 9 LRNFNNWMKSVLIGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEY 88 (313)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTC--CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-C
T ss_pred hhhccHHHHHHHHHHHHHHhhhccCCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccc
Confidence 456889999999887654 678999999999999999988777799999999999999999886531 2
Q ss_pred CceeEEEEcCCCCCchhhhhhhcCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCchHHHHHHHHh
Q 018352 80 NFIAEFFEADPCAENFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKYQKN 159 (357)
Q Consensus 80 ~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~i~~~~~~~ 159 (357)
..++.|+++|+...++...+....++||+|+|.+++||+|++.++...++++++++|||||+|++++++.+.+.+.+.+.
T Consensus 89 ~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~l~~~~~~~ 168 (313)
T 3bgv_A 89 IFSAEFITADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSFELIRRLEAS 168 (313)
T ss_dssp CCEEEEEECCTTTSCSTTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHHHHTTS
T ss_pred cceEEEEEecccccchhhhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCChHHHHHHHHhh
Confidence 34789999999876532222212458999999999999778888999999999999999999999999998887765421
Q ss_pred HHhhhcCCCCCCCCCCCCccCCccEEEEeecccCCCCccceeeEeEEcCCcccCcccccchHHHHHHHHHcCCEEEEecC
Q 018352 160 VEAYHNRSSSMKPNLVPNCIRSESYVITFEVEEEKFPLFGKKYQLKFANDISAETQCLVHFPSLIRLAREAGLEYVEIQN 239 (357)
Q Consensus 160 ~~~~~~~~~~~~~~~fgn~i~~~~y~i~f~~~~~~~p~fG~~Y~f~L~~~~~~~~eylv~~~~l~~la~e~Glelv~~~~ 239 (357)
. ...+|| .+|.+.|... ..++.+|.+|.|.+.. +.++++|+++++.+.++++++||++++..+
T Consensus 169 ------~-----~~~~~~----~~~~~~f~~~-~~~~~~~~~~~f~l~~-~~~~~~~~~~~~~~~~l~~~~G~~~v~~~~ 231 (313)
T 3bgv_A 169 ------E-----TESFGN----EIYTVKFQKK-GDYPLFGCKYDFNLEG-VVDVPEFLVYFPLLNEMAKKYNMKLVYKKT 231 (313)
T ss_dssp ------S-----SSEEEC----SSEEEEESCS-SCCCSSCCEEEEEEC----CCEEECCCHHHHHHHGGGGTEEEEEEEE
T ss_pred ------c-----cCccCC----eeEEEEeCCC-CCCCCccceEEEEECC-cccCcceEEcHHHHHHHHHHcCcEEEEecC
Confidence 0 013444 4688888643 3468899999999855 357889999999999999999999999999
Q ss_pred chHHHHhhHHHH--HHHHHhcCC------------------------------CCCCCCCCCChhHHHHHhhheeEEEEe
Q 018352 240 LNEFYDDNRALF--AGMLMSAGP------------------------------NLIDPRGRLLPRSYDVLGLYSTFIFQK 287 (357)
Q Consensus 240 f~~f~~~~~~~~--~~~~~~~~~------------------------------~~~~~~g~l~~~e~e~~~lY~~f~F~K 287 (357)
|.++++.+.... ..++.++.. ...+..|+||++||||++||++|||+|
T Consensus 232 f~~~g~~~~~~~r~~~l~~~~~~~~~y~~~~~~~~~~~~~~ty~~~~~~~~~~~~~~~~~~~~~~e~e~~~~y~~~~f~k 311 (313)
T 3bgv_A 232 FLEFYEEKIKNNENKMLLKRMQALEPYPANESSKLVSEKVDDYEHAAKYMKNSQVRLPLGTLSKSEWEATSIYLVFAFEK 311 (313)
T ss_dssp HHHHHHHHTTSHHHHHHHHHHC----------------------------------CCSSSSCHHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHhccchhhhHHHHhhhcccccCccccccccccchhhhHHHHHHHhhccccCcCCCCCHHHHHHHHhheEEEEEe
Confidence 999998864211 111111100 001135799999999999999999999
Q ss_pred c
Q 018352 288 P 288 (357)
Q Consensus 288 ~ 288 (357)
.
T Consensus 312 ~ 312 (313)
T 3bgv_A 312 Q 312 (313)
T ss_dssp C
T ss_pred C
Confidence 6
No 3
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=100.00 E-value=5.5e-34 Score=267.85 Aligned_cols=250 Identities=26% Similarity=0.480 Sum_probs=211.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCC
Q 018352 13 HHRLYEFAKTALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCA 92 (357)
Q Consensus 13 ~~~~~nwvks~Li~~~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~ 92 (357)
...+++|++..++..++.++.+|||+|||+|..+..++..+..+|+|+|+|+.+++.|++++...+...++.|+++|+..
T Consensus 46 ~~~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 125 (298)
T 1ri5_A 46 IRNANNFIKACLIRLYTKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYG 125 (298)
T ss_dssp HHHHHHHHHHHHHHHHCCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTT
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccc
Confidence 34578999999999999999999999999999988887777679999999999999999998876544578999999987
Q ss_pred CchhhhhhhcCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCchHHHHHHHHhHHhhhcCCCCCCC
Q 018352 93 ENFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKYQKNVEAYHNRSSSMKP 172 (357)
Q Consensus 93 ~~~~~~l~~~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~i~~~~~~~~~~~~~~~~~~~~ 172 (357)
.++. .+++||+|+|.+++||.+++.++...++++++++|||||++++++|+...+..++..
T Consensus 126 ~~~~-----~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~-------------- 186 (298)
T 1ri5_A 126 RHMD-----LGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVILERYKQ-------------- 186 (298)
T ss_dssp SCCC-----CSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHHHHH--------------
T ss_pred cccC-----CCCCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHcc--------------
Confidence 6541 257899999999999977889999999999999999999999999999888776652
Q ss_pred CCCCCccCCccEEEEeecccCCCCc-cceeeEeEEcCCcccCcccccchHHHHHHHHHcCCEEEEecCchHHHHhhHHHH
Q 018352 173 NLVPNCIRSESYVITFEVEEEKFPL-FGKKYQLKFANDISAETQCLVHFPSLIRLAREAGLEYVEIQNLNEFYDDNRALF 251 (357)
Q Consensus 173 ~~fgn~i~~~~y~i~f~~~~~~~p~-fG~~Y~f~L~~~~~~~~eylv~~~~l~~la~e~Glelv~~~~f~~f~~~~~~~~ 251 (357)
..+++ ..|.+.++.. ..+|. +|..|.|++.+.+..+++++++++.+.++++++||+++....|.+||..+...+
T Consensus 187 ~~~~~----~~~~~~~~~~-~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~l~~ll~~aGf~~v~~~~~~~~~~~~~~~~ 261 (298)
T 1ri5_A 187 GRMSN----DFYKIELEKM-EDVPMESVREYRFTLLDSVNNCIEYFVDFTRMVDGFKRLGLSLVERKGFIDFYEDEGRRN 261 (298)
T ss_dssp TCCBC----SSEEEECCCC-SSCCTTTCCEEEEEETTSCSSEEEECCCHHHHHHHHHTTTEEEEEEEEHHHHHHHHHHTC
T ss_pred CccCC----eeEEEEeCcc-ccccccccceEEEEEchhhcCCcccccCHHHHHHHHHHcCCEEEEecCHHHHHHHHHHHh
Confidence 12343 3688887643 23454 899999999887767778999999999999999999999999999999988777
Q ss_pred HHHHHhcCCCCCCCCCCCChhHHHHHhhheeEEEEecCCCC
Q 018352 252 AGMLMSAGPNLIDPRGRLLPRSYDVLGLYSTFIFQKPDPDV 292 (357)
Q Consensus 252 ~~~~~~~~~~~~~~~g~l~~~e~e~~~lY~~f~F~K~~~~~ 292 (357)
.+++++++ .|.++.++|+++++|++|+|+|.+++.
T Consensus 262 ~~~~~~~~------~~~~s~~~~~~~~~y~~~~~~k~~~~~ 296 (298)
T 1ri5_A 262 PELSKKMG------LGCLTREESEVVGIYEVVVFRKLVPES 296 (298)
T ss_dssp HHHHHSSS------CCCCCHHHHHHHTTEEEEEEEEC----
T ss_pred hhHHHhcC------cCccCHHHHHHHhceEEEEEEEcCCcc
Confidence 77777776 388999999999999999999997643
No 4
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.80 E-value=5.3e-19 Score=165.12 Aligned_cols=114 Identities=21% Similarity=0.240 Sum_probs=98.4
Q ss_pred HHHHHHcCCCCCEEEEECCCCChhHHHHHHh---cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhh
Q 018352 22 TALIKIYSHPYVTVCDLYCGAGVDVDKWETA---LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ 98 (357)
Q Consensus 22 s~Li~~~~~~~~~VLDlGCG~G~~l~k~~~~---~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~ 98 (357)
..++.++++++.+|||||||+|..+..+++. +..+|+|+|+|+.||+.|+++.+..+...+++|+++|+...++
T Consensus 61 ~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~--- 137 (261)
T 4gek_A 61 GMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAI--- 137 (261)
T ss_dssp HHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCC---
T ss_pred HHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccc---
Confidence 3566778899999999999999888888765 3458999999999999999998876666689999999987554
Q ss_pred hhhcCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 99 MQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 99 l~~~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
+.||+|+|.+++|+ + +.++...+|++++++|||||+|+++
T Consensus 138 -----~~~d~v~~~~~l~~-~-~~~~~~~~l~~i~~~LkpGG~lii~ 177 (261)
T 4gek_A 138 -----ENASMVVLNFTLQF-L-EPSERQALLDKIYQGLNPGGALVLS 177 (261)
T ss_dssp -----CSEEEEEEESCGGG-S-CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -----cccccceeeeeeee-c-CchhHhHHHHHHHHHcCCCcEEEEE
Confidence 56999999999998 4 5666788999999999999999987
No 5
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.75 E-value=1.7e-17 Score=149.56 Aligned_cols=117 Identities=21% Similarity=0.262 Sum_probs=98.5
Q ss_pred HHHcCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCC----CceeEEEEcCCCCCchhhhhh
Q 018352 25 IKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRK----NFIAEFFEADPCAENFETQMQ 100 (357)
Q Consensus 25 i~~~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~----~~~v~f~~~D~~~~~~~~~l~ 100 (357)
+..+++++.+|||+|||+|..+..++..+ .+|+|+|+|+.+++.|+++....+. ..++.+.++|+...++
T Consensus 24 ~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~----- 97 (235)
T 3sm3_A 24 IHNYLQEDDEILDIGCGSGKISLELASKG-YSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSF----- 97 (235)
T ss_dssp HHHHCCTTCEEEEETCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCS-----
T ss_pred HHHhCCCCCeEEEECCCCCHHHHHHHhCC-CeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCC-----
Confidence 44556788999999999998888887774 4999999999999999998876532 2368999999987665
Q ss_pred hcCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 101 EKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 101 ~~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
..++||+|+|..++|+ +.+.+....+++++.++|||||+++++.++.
T Consensus 98 -~~~~~D~v~~~~~l~~-~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 98 -HDSSFDFAVMQAFLTS-VPDPKERSRIIKEVFRVLKPGAYLYLVEFGQ 144 (235)
T ss_dssp -CTTCEEEEEEESCGGG-CCCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred -CCCceeEEEEcchhhc-CCCHHHHHHHHHHHHHHcCCCeEEEEEECCc
Confidence 4689999999999999 6677778899999999999999999986544
No 6
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.74 E-value=5.6e-16 Score=143.52 Aligned_cols=177 Identities=18% Similarity=0.156 Sum_probs=126.4
Q ss_pred HHHHHHHHHHHHHc-CCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCC
Q 018352 15 RLYEFAKTALIKIY-SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAE 93 (357)
Q Consensus 15 ~~~nwvks~Li~~~-~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~ 93 (357)
.....+...++... ..++.+|||||||+|..+..++.....+|+|+|+|+.+++.|+++....+...++.++.+|+...
T Consensus 44 ~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 123 (273)
T 3bus_A 44 DATDRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDL 123 (273)
T ss_dssp HHHHHHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccC
Confidence 33333344455554 35788999999999998888877656799999999999999999987765545799999999876
Q ss_pred chhhhhhhcCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCchH-HHHHHHHhHHhhhcCCCCCCC
Q 018352 94 NFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSST-IWAKYQKNVEAYHNRSSSMKP 172 (357)
Q Consensus 94 ~~~~~l~~~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~-i~~~~~~~~~~~~~~~~~~~~ 172 (357)
++ ++++||+|++..++|+ +.+ ...+++++.++|||||+++++.+.... ...........+
T Consensus 124 ~~------~~~~fD~v~~~~~l~~-~~~---~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~--------- 184 (273)
T 3bus_A 124 PF------EDASFDAVWALESLHH-MPD---RGRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAF--------- 184 (273)
T ss_dssp CS------CTTCEEEEEEESCTTT-SSC---HHHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHH---------
T ss_pred CC------CCCCccEEEEechhhh-CCC---HHHHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHH---------
Confidence 65 4689999999999998 433 468899999999999999988654310 000000000000
Q ss_pred CCCCCccCCccEEEEeecccCCCCccceeeEeEEcCCcccCcccccchHHHHHHHHHcCCEEEEecCchHHHHh
Q 018352 173 NLVPNCIRSESYVITFEVEEEKFPLFGKKYQLKFANDISAETQCLVHFPSLIRLAREAGLEYVEIQNLNEFYDD 246 (357)
Q Consensus 173 ~~fgn~i~~~~y~i~f~~~~~~~p~fG~~Y~f~L~~~~~~~~eylv~~~~l~~la~e~Glelv~~~~f~~f~~~ 246 (357)
+ ..++ ..++.+.+.+.++++++||+++....+...|..
T Consensus 185 -----------~-----------~~~~--------------~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~ 222 (273)
T 3bus_A 185 -----------R-----------AGGG--------------VLSLGGIDEYESDVRQAELVVTSTVDISAQARP 222 (273)
T ss_dssp -----------H-----------HHHT--------------CCCCCCHHHHHHHHHHTTCEEEEEEECHHHHTT
T ss_pred -----------H-----------hhcC--------------ccCCCCHHHHHHHHHHcCCeEEEEEECcHhHHH
Confidence 0 0000 013457788999999999999998888765544
No 7
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.74 E-value=1e-17 Score=152.20 Aligned_cols=187 Identities=20% Similarity=0.272 Sum_probs=134.6
Q ss_pred HHHcCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCC
Q 018352 25 IKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKAN 104 (357)
Q Consensus 25 i~~~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~ 104 (357)
+..+++++.+|||||||+|..+..++..+ .+|+|+|+|+.+++.|+++... .++.++++|+...++ .++
T Consensus 47 l~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~~------~~~ 115 (242)
T 3l8d_A 47 FEQYVKKEAEVLDVGCGDGYGTYKLSRTG-YKAVGVDISEVMIQKGKERGEG----PDLSFIKGDLSSLPF------ENE 115 (242)
T ss_dssp HHHHSCTTCEEEEETCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHTTTCB----TTEEEEECBTTBCSS------CTT
T ss_pred HHHHcCCCCeEEEEcCCCCHHHHHHHHcC-CeEEEEECCHHHHHHHHhhccc----CCceEEEcchhcCCC------CCC
Confidence 34456788999999999998888887774 4999999999999999887533 378999999987665 468
Q ss_pred cccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCchHHHHHHHHhHHhhhcCCCCCCCCCCCCccCCccE
Q 018352 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKYQKNVEAYHNRSSSMKPNLVPNCIRSESY 184 (357)
Q Consensus 105 ~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~i~~~~~~~~~~~~~~~~~~~~~~fgn~i~~~~y 184 (357)
+||+|+|..++|+ +. +...++++++++|+|||++++++++...... ... +
T Consensus 116 ~fD~v~~~~~l~~-~~---~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~---------------------~~~-----~ 165 (242)
T 3l8d_A 116 QFEAIMAINSLEW-TE---EPLRALNEIKRVLKSDGYACIAILGPTAKPR---------------------ENS-----Y 165 (242)
T ss_dssp CEEEEEEESCTTS-SS---CHHHHHHHHHHHEEEEEEEEEEEECTTCGGG---------------------GGG-----G
T ss_pred CccEEEEcChHhh-cc---CHHHHHHHHHHHhCCCeEEEEEEcCCcchhh---------------------hhh-----h
Confidence 9999999999998 43 4567899999999999999999765421100 000 0
Q ss_pred EEEeecccCCCCccceeeEeEEcCCcccCcccccchHHHHHHHHHcCCEEEEecCchHHHHhhHHHHHHHHHhcCCCCCC
Q 018352 185 VITFEVEEEKFPLFGKKYQLKFANDISAETQCLVHFPSLIRLAREAGLEYVEIQNLNEFYDDNRALFAGMLMSAGPNLID 264 (357)
Q Consensus 185 ~i~f~~~~~~~p~fG~~Y~f~L~~~~~~~~eylv~~~~l~~la~e~Glelv~~~~f~~f~~~~~~~~~~~~~~~~~~~~~ 264 (357)
. ..++.. ......+.+.+.++++++||+++....+ |...... .+
T Consensus 166 ~----------~~~~~~-----------~~~~~~~~~~~~~~l~~~Gf~~~~~~~~---~~~~~~~--~~---------- 209 (242)
T 3l8d_A 166 P----------RLYGKD-----------VVCNTMMPWEFEQLVKEQGFKVVDGIGV---YKRGVNE--KM---------- 209 (242)
T ss_dssp G----------GGGTCC-----------CSSCCCCHHHHHHHHHHTTEEEEEEEEE---ECTTCCH--HH----------
T ss_pred h----------hhcccc-----------ccccCCCHHHHHHHHHHcCCEEEEeecc---cccCccH--HH----------
Confidence 0 001110 0113456778999999999999988765 1111000 00
Q ss_pred CCCCCChhHHHHHhhheeEEEEecC
Q 018352 265 PRGRLLPRSYDVLGLYSTFIFQKPD 289 (357)
Q Consensus 265 ~~g~l~~~e~e~~~lY~~f~F~K~~ 289 (357)
.+.+..+..++.+.+..|+++|..
T Consensus 210 -~~~~~~~l~~~~~~~~~~~~~~~~ 233 (242)
T 3l8d_A 210 -LGQLSTDLQQSLTFLWVFMLKRHK 233 (242)
T ss_dssp -HTTSCHHHHHHTEEEEEEEEEECC
T ss_pred -HHHHHHhHHHHHhHhhhhhhHHHH
Confidence 135566778899999999999875
No 8
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.74 E-value=1.6e-17 Score=157.02 Aligned_cols=184 Identities=14% Similarity=0.112 Sum_probs=127.9
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
..++.+|||||||+|..+..++.....+|+|+|+|+.+++.|+++....+...+++++++|+... +++||+
T Consensus 70 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---------~~~fD~ 140 (302)
T 3hem_A 70 LEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF---------DEPVDR 140 (302)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---------CCCCSE
T ss_pred CCCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---------CCCccE
Confidence 45788999999999999888887733799999999999999999998766555799999998542 478999
Q ss_pred EEEccchhhccC-----CHHHHHHHHHHHHhcccCCcEEEEEeCCchHHHHHHHHhHHhhhcCCCCCCCCCCCCccCCcc
Q 018352 109 VCCFQHLQMCFE-----TEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKYQKNVEAYHNRSSSMKPNLVPNCIRSES 183 (357)
Q Consensus 109 V~~~~~lh~~fe-----s~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~i~~~~~~~~~~~~~~~~~~~~~~fgn~i~~~~ 183 (357)
|+|..++|++.. ..+....+++++.++|||||++++..+........... +. .+.
T Consensus 141 v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~--------~~-----~~~------- 200 (302)
T 3hem_A 141 IVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQEL--------GL-----TSP------- 200 (302)
T ss_dssp EEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHH--------TC-----CCC-------
T ss_pred EEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhc--------cc-----ccc-------
Confidence 999999998322 22567899999999999999999885543221110000 00 000
Q ss_pred EEEEeecccCCCCccceeeEeEEcCCcccCcccccchHHHHHHHHHcCCEEEEecCchHHHHhhHHHHHHHH
Q 018352 184 YVITFEVEEEKFPLFGKKYQLKFANDISAETQCLVHFPSLIRLAREAGLEYVEIQNLNEFYDDNRALFAGML 255 (357)
Q Consensus 184 y~i~f~~~~~~~p~fG~~Y~f~L~~~~~~~~eylv~~~~l~~la~e~Glelv~~~~f~~f~~~~~~~~~~~~ 255 (357)
+.. ..+..|-.+|.| ...++.+.+.+.++++++||+++....+...|......|...+
T Consensus 201 ----~~~--~~~~~~~~~~~~--------p~~~~~s~~~~~~~l~~aGf~~~~~~~~~~~y~~tl~~w~~~~ 258 (302)
T 3hem_A 201 ----MSL--LRFIKFILTEIF--------PGGRLPRISQVDYYSSNAGWKVERYHRIGANYVPTLNAWADAL 258 (302)
T ss_dssp ----HHH--HHHHHHHHHHTC--------TTCCCCCHHHHHHHHHHHTCEEEEEEECGGGHHHHHHHHHHHH
T ss_pred ----ccc--cchHHHHHHhcC--------CCCCCCCHHHHHHHHHhCCcEEEEEEeCchhHHHHHHHHHHHH
Confidence 000 000011112222 0114567888999999999999999999888876554444433
No 9
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.74 E-value=1.2e-16 Score=149.72 Aligned_cols=119 Identities=21% Similarity=0.242 Sum_probs=95.0
Q ss_pred CCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCC---CceeEEEEcCCCCCchhhhhhhcCCccc
Q 018352 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRK---NFIAEFFEADPCAENFETQMQEKANQAD 107 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~---~~~v~f~~~D~~~~~~~~~l~~~~~~FD 107 (357)
++.+|||||||+|..+..++..+. +|+|+|+|+.|++.|+++...... ..++.+..+|+...+ ..+ ..+++||
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~-~~~~~fD 132 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEEGF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLD--KDV-PAGDGFD 132 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHH--HHS-CCTTCEE
T ss_pred CCCEEEEecCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCc--ccc-ccCCCeE
Confidence 578999999999998888877765 999999999999999987643221 125778888876533 000 1458999
Q ss_pred EEEEc-cchhhccCC----HHHHHHHHHHHHhcccCCcEEEEEeCCchHHHH
Q 018352 108 LVCCF-QHLQMCFET----EERARRLLQNVSSLLKPGGYFLGITPDSSTIWA 154 (357)
Q Consensus 108 lV~~~-~~lh~~fes----~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~i~~ 154 (357)
+|+|. .++|+ +.+ .++..+++++++++|||||+|++++++.+.+..
T Consensus 133 ~V~~~g~~l~~-~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~ 183 (293)
T 3thr_A 133 AVICLGNSFAH-LPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNYDYILS 183 (293)
T ss_dssp EEEECTTCGGG-SCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHH
T ss_pred EEEEcChHHhh-cCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCCHHHHhh
Confidence 99998 89998 444 567889999999999999999999999877754
No 10
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.73 E-value=1e-15 Score=143.86 Aligned_cols=111 Identities=12% Similarity=0.008 Sum_probs=94.5
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
..++.+|||+|||+|..+..++.....+|+|+|+|+.+++.|+++.+..+...++.|+++|+...++ ++++||+
T Consensus 80 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~------~~~~fD~ 153 (297)
T 2o57_A 80 LQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPC------EDNSYDF 153 (297)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSS------CTTCEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCC------CCCCEeE
Confidence 3578899999999999888887763459999999999999999998766554579999999988766 5689999
Q ss_pred EEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
|+|..++|+ +.+ ...+++++.++|||||+++++.+..
T Consensus 154 v~~~~~l~~-~~~---~~~~l~~~~~~LkpgG~l~~~~~~~ 190 (297)
T 2o57_A 154 IWSQDAFLH-SPD---KLKVFQECARVLKPRGVMAITDPMK 190 (297)
T ss_dssp EEEESCGGG-CSC---HHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred EEecchhhh-cCC---HHHHHHHHHHHcCCCeEEEEEEecc
Confidence 999999998 443 6789999999999999999986653
No 11
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.73 E-value=1.7e-17 Score=148.61 Aligned_cols=109 Identities=15% Similarity=0.103 Sum_probs=88.6
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcC-----------CCceeEEEEcCCCCCchhh
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQR-----------KNFIAEFFEADPCAENFET 97 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~-----------~~~~v~f~~~D~~~~~~~~ 97 (357)
++++.+|||+|||+|.++..+++.+. +|+|+|+|+.||+.|+++..... ...+++|+++|+...++
T Consensus 20 ~~~~~~vLD~GCG~G~~~~~la~~g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~-- 96 (203)
T 1pjz_A 20 VVPGARVLVPLCGKSQDMSWLSGQGY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTA-- 96 (203)
T ss_dssp CCTTCEEEETTTCCSHHHHHHHHHCC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTH--
T ss_pred cCCCCEEEEeCCCCcHhHHHHHHCCC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCc--
Confidence 45788999999999999888877765 99999999999999998864210 02368999999988665
Q ss_pred hhhhcC-CcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEe
Q 018352 98 QMQEKA-NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 98 ~l~~~~-~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~ 146 (357)
.+ ++||+|++..++|+ + +.++..+++++++++|||||++++.+
T Consensus 97 ----~~~~~fD~v~~~~~l~~-l-~~~~~~~~l~~~~r~LkpgG~~~l~~ 140 (203)
T 1pjz_A 97 ----RDIGHCAAFYDRAAMIA-L-PADMRERYVQHLEALMPQACSGLLIT 140 (203)
T ss_dssp ----HHHHSEEEEEEESCGGG-S-CHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred ----ccCCCEEEEEECcchhh-C-CHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 22 68999999999988 4 46667889999999999999855554
No 12
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.72 E-value=1.8e-16 Score=148.25 Aligned_cols=215 Identities=17% Similarity=0.188 Sum_probs=140.5
Q ss_pred HHHHHcCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCc-hhhhhhh
Q 018352 23 ALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAEN-FETQMQE 101 (357)
Q Consensus 23 ~Li~~~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~-~~~~l~~ 101 (357)
.++..+..++.+|||||||+|..+..++.. ..+|+|+|+|+.+++.|+++....+...++.|+++|+...+ +
T Consensus 60 ~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~------ 132 (285)
T 4htf_A 60 RVLAEMGPQKLRVLDAGGGEGQTAIKMAER-GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASH------ 132 (285)
T ss_dssp HHHHHTCSSCCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGG------
T ss_pred HHHHhcCCCCCEEEEeCCcchHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhh------
Confidence 345555556789999999999888888777 45999999999999999999887655457999999987654 3
Q ss_pred cCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCchHHHHHHHHhHHhhhcCCCCCCCCCCCCccCC
Q 018352 102 KANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKYQKNVEAYHNRSSSMKPNLVPNCIRS 181 (357)
Q Consensus 102 ~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~i~~~~~~~~~~~~~~~~~~~~~~fgn~i~~ 181 (357)
.+++||+|+|..++|+ +.+ ...+++++.++|||||++++.+++.........- .++.
T Consensus 133 ~~~~fD~v~~~~~l~~-~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~----------------~~~~--- 189 (285)
T 4htf_A 133 LETPVDLILFHAVLEW-VAD---PRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMV----------------AGNF--- 189 (285)
T ss_dssp CSSCEEEEEEESCGGG-CSC---HHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHH----------------TTCH---
T ss_pred cCCCceEEEECchhhc-ccC---HHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHH----------------hcCH---
Confidence 4689999999999998 433 4679999999999999999999887654322110 0000
Q ss_pred ccEEEEeecccCCCCccceeeEeEEcCCcccCcccccchHHHHHHHHHcCCEEEEecCc---hHHHHhh---HHHHHHHH
Q 018352 182 ESYVITFEVEEEKFPLFGKKYQLKFANDISAETQCLVHFPSLIRLAREAGLEYVEIQNL---NEFYDDN---RALFAGML 255 (357)
Q Consensus 182 ~~y~i~f~~~~~~~p~fG~~Y~f~L~~~~~~~~eylv~~~~l~~la~e~Glelv~~~~f---~~f~~~~---~~~~~~~~ 255 (357)
-+ + . ...+. + ... . ....+..+.+.+.++++++||+++....+ .+|.... ...+..++
T Consensus 190 -~~---~-~--~~~~~-~--~~~----~--~~~~~~~~~~~l~~~l~~aGf~v~~~~~~~~~~~~~~~~~~~~~~~~~l~ 253 (285)
T 4htf_A 190 -DY---V-Q--AGMPK-K--KKR----T--LSPDYPRDPTQVYLWLEEAGWQIMGKTGVRVFHDYLREKHQQRDCYEALL 253 (285)
T ss_dssp -HH---H-H--TTCCC-C------------CCCSCCBCHHHHHHHHHHTTCEEEEEEEESSSGGGCSSTTHHHHTHHHHH
T ss_pred -HH---H-h--hhccc-c--ccc----c--CCCCCCCCHHHHHHHHHHCCCceeeeeeEEEeeecccccccCcccHHHHH
Confidence 00 0 0 00000 0 000 0 01124568899999999999999977654 4443321 11133333
Q ss_pred HhcCCCCCCCCCCCChhHHHHHhhheeEEEEecCC
Q 018352 256 MSAGPNLIDPRGRLLPRSYDVLGLYSTFIFQKPDP 290 (357)
Q Consensus 256 ~~~~~~~~~~~g~l~~~e~e~~~lY~~f~F~K~~~ 290 (357)
+-.-. + + ....+...+-|..++.+|.+.
T Consensus 254 ~~e~~-~----~--~~~~~~~~~~~~~~varK~~~ 281 (285)
T 4htf_A 254 ELETR-Y----C--RQEPYITLGRYIHVTARKPQS 281 (285)
T ss_dssp HHHHH-H----T--TSTTGGGGCSEEEEEEECCCC
T ss_pred HHHHH-h----c--CCChHHHHHhheEEEEEcCCc
Confidence 21100 0 0 012345566788889999765
No 13
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.72 E-value=5.3e-16 Score=145.03 Aligned_cols=180 Identities=18% Similarity=0.219 Sum_probs=124.1
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
..++.+|||||||+|..+..++.....+|+|+|+|+.+++.|+++....+...++.+..+|+.. + + ++||+
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~------~-~~fD~ 132 (287)
T 1kpg_A 62 LQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQ--F------D-EPVDR 132 (287)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGG--C------C-CCCSE
T ss_pred CCCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhh--C------C-CCeeE
Confidence 3578899999999999888887553459999999999999999998866554578999999743 3 2 78999
Q ss_pred EEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCchHHHHHHHHhHHhhhcCCCCCCCCCCCCccCCccEEEEe
Q 018352 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKYQKNVEAYHNRSSSMKPNLVPNCIRSESYVITF 188 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~i~~~~~~~~~~~~~~~~~~~~~~fgn~i~~~~y~i~f 188 (357)
|+|..++|+ + ..++...+++++.++|||||++++..++......... .+. ... +
T Consensus 133 v~~~~~l~~-~-~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~--------~~~-------~~~---------~ 186 (287)
T 1kpg_A 133 IVSIGAFEH-F-GHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHE--------RGL-------PMS---------F 186 (287)
T ss_dssp EEEESCGGG-T-CTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTT--------TTC-------SCH---------H
T ss_pred EEEeCchhh-c-ChHHHHHHHHHHHHhcCCCCEEEEEEecCCCcccccc--------ccc-------ccc---------c
Confidence 999999998 4 2245778999999999999999998766533221000 000 000 0
Q ss_pred ecccCCCCccceeeEeEEcCCcccCcccccchHHHHHHHHHcCCEEEEecCchHHHHhhHHHHHH
Q 018352 189 EVEEEKFPLFGKKYQLKFANDISAETQCLVHFPSLIRLAREAGLEYVEIQNLNEFYDDNRALFAG 253 (357)
Q Consensus 189 ~~~~~~~p~fG~~Y~f~L~~~~~~~~eylv~~~~l~~la~e~Glelv~~~~f~~f~~~~~~~~~~ 253 (357)
.. .....|-.+|.| ....+.+.+.+.++++++||+++....+...|......|..
T Consensus 187 ~~--~~~~~~~~~~~~--------~~~~~~s~~~~~~~l~~aGf~~~~~~~~~~~y~~~~~~w~~ 241 (287)
T 1kpg_A 187 TF--ARFLKFIVTEIF--------PGGRLPSIPMVQECASANGFTVTRVQSLQPHYAKTLDLWSA 241 (287)
T ss_dssp HH--HHHHHHHHHHTS--------TTCCCCCHHHHHHHHHTTTCEEEEEEECHHHHHHHHHHHHH
T ss_pred cc--cchhhhHHheeC--------CCCCCCCHHHHHHHHHhCCcEEEEEEeCcHhHHHHHHHHHH
Confidence 00 000000011111 01134578899999999999999999987777665444433
No 14
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.72 E-value=2.7e-18 Score=160.04 Aligned_cols=102 Identities=16% Similarity=0.193 Sum_probs=85.2
Q ss_pred HHcCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCc
Q 018352 26 KIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQ 105 (357)
Q Consensus 26 ~~~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~ 105 (357)
..+.+.+.+|||||||+|..+..++.. ..+|+|+|+|+.||+.|+++ .++.|+++|+...++ ++++
T Consensus 34 ~~~~~~~~~vLDvGcGtG~~~~~l~~~-~~~v~gvD~s~~ml~~a~~~-------~~v~~~~~~~e~~~~------~~~s 99 (257)
T 4hg2_A 34 GEVAPARGDALDCGCGSGQASLGLAEF-FERVHAVDPGEAQIRQALRH-------PRVTYAVAPAEDTGL------PPAS 99 (257)
T ss_dssp HHHSSCSSEEEEESCTTTTTHHHHHTT-CSEEEEEESCHHHHHTCCCC-------TTEEEEECCTTCCCC------CSSC
T ss_pred HHhcCCCCCEEEEcCCCCHHHHHHHHh-CCEEEEEeCcHHhhhhhhhc-------CCceeehhhhhhhcc------cCCc
Confidence 345566789999999999888777654 46999999999999887532 268999999988777 6789
Q ss_pred ccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEe
Q 018352 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 106 FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~ 146 (357)
||+|+|..++|| + + ..+++++++|+|||||+|++..
T Consensus 100 fD~v~~~~~~h~-~-~---~~~~~~e~~rvLkpgG~l~~~~ 135 (257)
T 4hg2_A 100 VDVAIAAQAMHW-F-D---LDRFWAELRRVARPGAVFAAVT 135 (257)
T ss_dssp EEEEEECSCCTT-C-C---HHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccEEEEeeehhH-h-h---HHHHHHHHHHHcCCCCEEEEEE
Confidence 999999999999 5 2 4568999999999999998774
No 15
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.71 E-value=2.3e-16 Score=144.84 Aligned_cols=161 Identities=17% Similarity=0.195 Sum_probs=121.4
Q ss_pred CCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEE
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
.++.+|||+|||+|..+..++.....+|+|+|+|+.+++.|+++.... .+++++++|+...++ ++++||+|
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~------~~~~fD~v 124 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN---NKIIFEANDILTKEF------PENNFDLI 124 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC---TTEEEEECCTTTCCC------CTTCEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC---CCeEEEECccccCCC------CCCcEEEE
Confidence 367899999999999888887764569999999999999999887653 378999999988665 56899999
Q ss_pred EEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCchHHHHHHHHhHHhhhcCCCCCCCCCCCCccCCccEEEEee
Q 018352 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKYQKNVEAYHNRSSSMKPNLVPNCIRSESYVITFE 189 (357)
Q Consensus 110 ~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~i~~~~~~~~~~~~~~~~~~~~~~fgn~i~~~~y~i~f~ 189 (357)
+|..++|+ + +..+...+++++.++|||||+++++.+...... .+... + .
T Consensus 125 ~~~~~l~~-~-~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~--------------------~~~~~-----~----~ 173 (266)
T 3ujc_A 125 YSRDAILA-L-SLENKNKLFQKCYKWLKPTGTLLITDYCATEKE--------------------NWDDE-----F----K 173 (266)
T ss_dssp EEESCGGG-S-CHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGG--------------------GCCHH-----H----H
T ss_pred eHHHHHHh-c-ChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcc--------------------cchHH-----H----H
Confidence 99999998 4 457889999999999999999999865432100 00000 0 0
Q ss_pred cccCCCCccceeeEeEEcCCcccCcccccchHHHHHHHHHcCCEEEEecCchHHHHhhH
Q 018352 190 VEEEKFPLFGKKYQLKFANDISAETQCLVHFPSLIRLAREAGLEYVEIQNLNEFYDDNR 248 (357)
Q Consensus 190 ~~~~~~p~fG~~Y~f~L~~~~~~~~eylv~~~~l~~la~e~Glelv~~~~f~~f~~~~~ 248 (357)
.| +.... ..+.+.+.+.++++++||+.+....+...|....
T Consensus 174 -----------~~---~~~~~----~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~ 214 (266)
T 3ujc_A 174 -----------EY---VKQRK----YTLITVEEYADILTACNFKNVVSKDLSDYWNQLL 214 (266)
T ss_dssp -----------HH---HHHHT----CCCCCHHHHHHHHHHTTCEEEEEEECHHHHHHHH
T ss_pred -----------HH---HhcCC----CCCCCHHHHHHHHHHcCCeEEEEEeCCHHHHHHH
Confidence 00 00000 0244778899999999999999998887776543
No 16
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.71 E-value=1.5e-16 Score=145.98 Aligned_cols=106 Identities=18% Similarity=0.141 Sum_probs=91.7
Q ss_pred CCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEEE
Q 018352 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~ 110 (357)
++.+|||||||+|..+..++..+..+|+|+|+|+.+++.|+++... .++.|+++|+...++ .+++||+|+
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~~------~~~~fD~v~ 113 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTTS----PVVCYEQKAIEDIAI------EPDAYNVVL 113 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCCC----TTEEEEECCGGGCCC------CTTCEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhcc----CCeEEEEcchhhCCC------CCCCeEEEE
Confidence 6789999999999888888877766999999999999999998762 278999999876554 468999999
Q ss_pred EccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCch
Q 018352 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (357)
Q Consensus 111 ~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~ 150 (357)
|..++|+ +. +...++++++++|||||++++++++..
T Consensus 114 ~~~~l~~-~~---~~~~~l~~~~~~LkpgG~l~~~~~~~~ 149 (253)
T 3g5l_A 114 SSLALHY-IA---SFDDICKKVYINLKSSGSFIFSVEHPV 149 (253)
T ss_dssp EESCGGG-CS---CHHHHHHHHHHHEEEEEEEEEEEECHH
T ss_pred Echhhhh-hh---hHHHHHHHHHHHcCCCcEEEEEeCCCc
Confidence 9999999 43 467899999999999999999988753
No 17
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.70 E-value=2e-16 Score=144.64 Aligned_cols=107 Identities=18% Similarity=0.169 Sum_probs=92.0
Q ss_pred CCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEE
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
.++.+|||||||+|..+..++.....+|+|+|+|+.+++.|+++.... .++.|+++|+...++ .+++||+|
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~------~~~~fD~v 162 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM---PVGKFILASMETATL------PPNTYDLI 162 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS---SEEEEEESCGGGCCC------CSSCEEEE
T ss_pred cCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC---CceEEEEccHHHCCC------CCCCeEEE
Confidence 367899999999998888887776778999999999999999987653 378999999877555 45799999
Q ss_pred EEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeC
Q 018352 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (357)
Q Consensus 110 ~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~p 147 (357)
+|..++|+ + +.++...+++++.++|||||+++++.+
T Consensus 163 ~~~~~l~~-~-~~~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 163 VIQWTAIY-L-TDADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp EEESCGGG-S-CHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEcchhhh-C-CHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 99999998 4 446788999999999999999999865
No 18
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.70 E-value=3.7e-16 Score=144.31 Aligned_cols=108 Identities=14% Similarity=0.223 Sum_probs=91.5
Q ss_pred HHHcCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCC
Q 018352 25 IKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKAN 104 (357)
Q Consensus 25 i~~~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~ 104 (357)
+....+++.+|||||||+|..+..++..+ .+|+|+|+|+.+++.|+++.. ++.|+++|+...++ ++
T Consensus 44 l~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~~------~~~~~~~d~~~~~~-------~~ 109 (263)
T 3pfg_A 44 VRRHSPKAASLLDVACGTGMHLRHLADSF-GTVEGLELSADMLAIARRRNP------DAVLHHGDMRDFSL-------GR 109 (263)
T ss_dssp HHHHCTTCCEEEEETCTTSHHHHHHTTTS-SEEEEEESCHHHHHHHHHHCT------TSEEEECCTTTCCC-------SC
T ss_pred HHhhCCCCCcEEEeCCcCCHHHHHHHHcC-CeEEEEECCHHHHHHHHhhCC------CCEEEECChHHCCc-------cC
Confidence 34455677899999999998888776664 489999999999999998864 57899999987554 47
Q ss_pred cccEEEEcc-chhhccCCHHHHHHHHHHHHhcccCCcEEEEEeC
Q 018352 105 QADLVCCFQ-HLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (357)
Q Consensus 105 ~FDlV~~~~-~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~p 147 (357)
+||+|+|.+ ++|| +.+.++...+++++.++|||||+|++...
T Consensus 110 ~fD~v~~~~~~l~~-~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 152 (263)
T 3pfg_A 110 RFSAVTCMFSSIGH-LAGQAELDAALERFAAHVLPDGVVVVEPW 152 (263)
T ss_dssp CEEEEEECTTGGGG-SCHHHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred CcCEEEEcCchhhh-cCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 899999998 9999 65667889999999999999999998743
No 19
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.70 E-value=1.1e-16 Score=151.12 Aligned_cols=120 Identities=18% Similarity=0.133 Sum_probs=96.5
Q ss_pred HHHHHcCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCC--ceeEEEEcCCCCCchhhhhh
Q 018352 23 ALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKN--FIAEFFEADPCAENFETQMQ 100 (357)
Q Consensus 23 ~Li~~~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~--~~v~f~~~D~~~~~~~~~l~ 100 (357)
.++..+..++.+|||||||+|..+..++..+ .+|+|+|+|+.|++.|+++....+.. .+++|+++|+...++
T Consensus 74 ~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~----- 147 (299)
T 3g2m_A 74 EFATRTGPVSGPVLELAAGMGRLTFPFLDLG-WEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL----- 147 (299)
T ss_dssp HHHHHHCCCCSCEEEETCTTTTTHHHHHTTT-CCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-----
T ss_pred HHHHhhCCCCCcEEEEeccCCHHHHHHHHcC-CeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-----
Confidence 3444444555699999999999888887765 58999999999999999998764211 368999999987554
Q ss_pred hcCCcccEEEEcc-chhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCchHH
Q 018352 101 EKANQADLVCCFQ-HLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTI 152 (357)
Q Consensus 101 ~~~~~FDlV~~~~-~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~i 152 (357)
+++||+|+|.+ .+|+ + +.++...+|+++.++|||||+|++.+++....
T Consensus 148 --~~~fD~v~~~~~~~~~-~-~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 196 (299)
T 3g2m_A 148 --DKRFGTVVISSGSINE-L-DEADRRGLYASVREHLEPGGKFLLSLAMSEAA 196 (299)
T ss_dssp --SCCEEEEEECHHHHTT-S-CHHHHHHHHHHHHHHEEEEEEEEEEEECCHHH
T ss_pred --CCCcCEEEECCccccc-C-CHHHHHHHHHHHHHHcCCCcEEEEEeecCccc
Confidence 47899998765 4665 4 66778999999999999999999999998655
No 20
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.70 E-value=7.4e-17 Score=149.92 Aligned_cols=129 Identities=17% Similarity=0.147 Sum_probs=96.6
Q ss_pred HHHHHHHHHHHHHc---CCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCC-----------
Q 018352 15 RLYEFAKTALIKIY---SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKN----------- 80 (357)
Q Consensus 15 ~~~nwvks~Li~~~---~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~----------- 80 (357)
.+.+|+...+-..+ ..++.+|||||||+|..+...+..+..+|+|+|+|+.||+.|+++.+.....
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~ 115 (263)
T 2a14_A 36 EMLKFNLECLHKTFGPGGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFAC 115 (263)
T ss_dssp HHHHHHHHHHHHHHSTTSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHH
Confidence 36778766654443 2367899999999996655554556668999999999999999876543110
Q ss_pred -----------------ceeE-EEEcCCCCC-chhhhhhhcCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcE
Q 018352 81 -----------------FIAE-FFEADPCAE-NFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGY 141 (357)
Q Consensus 81 -----------------~~v~-f~~~D~~~~-~~~~~l~~~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~ 141 (357)
.++. ++++|+... ++.. . ..++||+|+|.+++|++..+.++..+++++++++|||||+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~i~~~~~~D~~~~~~~~~-~--~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~ 192 (263)
T 2a14_A 116 ELEGNSGRWEEKEEKLRAAVKRVLKCDVHLGNPLAP-A--VLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGH 192 (263)
T ss_dssp HHTTCGGGHHHHHHHHHHHEEEEEECCTTSSSTTTT-C--CCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEE
T ss_pred hcCCCCcchhhHHHHHHhhhheEEeccccCCCCCCc-c--ccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcE
Confidence 1233 899999873 2210 0 2468999999999999666778888999999999999999
Q ss_pred EEEEe
Q 018352 142 FLGIT 146 (357)
Q Consensus 142 fi~t~ 146 (357)
|+++.
T Consensus 193 li~~~ 197 (263)
T 2a14_A 193 LVTTV 197 (263)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99984
No 21
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.69 E-value=1.9e-16 Score=140.76 Aligned_cols=124 Identities=18% Similarity=0.209 Sum_probs=102.6
Q ss_pred HHHHcCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcC
Q 018352 24 LIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKA 103 (357)
Q Consensus 24 Li~~~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~ 103 (357)
++..++.++.+|||+|||+|..+..++..+..+++|+|+|+.+++.|+++.... .++.++++|+...++ .+
T Consensus 35 ~l~~~~~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~---~~i~~~~~d~~~~~~------~~ 105 (215)
T 2pxx_A 35 LLEPELRPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAHV---PQLRWETMDVRKLDF------PS 105 (215)
T ss_dssp HHGGGCCTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTTC---TTCEEEECCTTSCCS------CS
T ss_pred HHHHhcCCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhcccC---CCcEEEEcchhcCCC------CC
Confidence 344556788999999999998888888776669999999999999999987642 268999999987655 45
Q ss_pred CcccEEEEccchhhcc-----------CCHHHHHHHHHHHHhcccCCcEEEEEeCCchHHHHHH
Q 018352 104 NQADLVCCFQHLQMCF-----------ETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKY 156 (357)
Q Consensus 104 ~~FDlV~~~~~lh~~f-----------es~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~i~~~~ 156 (357)
++||+|++..++|++. ++..+...+++++.++|||||++++.+++.......+
T Consensus 106 ~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~ 169 (215)
T 2pxx_A 106 ASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAPHFRTRH 169 (215)
T ss_dssp SCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCHHHHHHH
T ss_pred CcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCcHHHHHH
Confidence 7899999999888743 2356778999999999999999999999987665544
No 22
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.69 E-value=8e-17 Score=146.02 Aligned_cols=108 Identities=11% Similarity=0.155 Sum_probs=90.3
Q ss_pred CCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEEE
Q 018352 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~ 110 (357)
++.+|||||||+|..+..++..+. +|+|+|+|+.+++.|+++... ++.|+++|+... . .+++||+|+
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~-----~v~~~~~d~~~~-~------~~~~fD~v~ 108 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHFN-DITCVEASEEAISHAQGRLKD-----GITYIHSRFEDA-Q------LPRRYDNIV 108 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTCS-CEEEEESCHHHHHHHHHHSCS-----CEEEEESCGGGC-C------CSSCEEEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhhhC-----CeEEEEccHHHc-C------cCCcccEEE
Confidence 567999999999988877766544 899999999999999988753 689999998664 2 357899999
Q ss_pred EccchhhccCCHHHHHHHHHHHH-hcccCCcEEEEEeCCchHHHHH
Q 018352 111 CFQHLQMCFETEERARRLLQNVS-SLLKPGGYFLGITPDSSTIWAK 155 (357)
Q Consensus 111 ~~~~lh~~fes~~~~~~~L~~i~-~~LkpGG~fi~t~pd~~~i~~~ 155 (357)
|..++|+ +.+ ...++++++ ++|||||++++++|+.......
T Consensus 109 ~~~~l~~-~~~---~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~ 150 (250)
T 2p7i_A 109 LTHVLEH-IDD---PVALLKRINDDWLAEGGRLFLVCPNANAVSRQ 150 (250)
T ss_dssp EESCGGG-CSS---HHHHHHHHHHTTEEEEEEEEEEEECTTCHHHH
T ss_pred EhhHHHh-hcC---HHHHHHHHHHHhcCCCCEEEEEcCChHHHHHH
Confidence 9999998 433 468999999 9999999999999998665443
No 23
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.69 E-value=1.9e-16 Score=140.41 Aligned_cols=142 Identities=14% Similarity=0.062 Sum_probs=111.2
Q ss_pred CCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEEEE
Q 018352 32 YVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVCC 111 (357)
Q Consensus 32 ~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~~ 111 (357)
+.+|||+|||+|..+..++..+. +|+|+|+|+.|++.|+++.. ++.|+++|+...++ .+++||+|+|
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~------~~~~~~~d~~~~~~------~~~~fD~v~~ 108 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH-QIEGLEPATRLVELARQTHP------SVTFHHGTITDLSD------SPKRWAGLLA 108 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC-CEEEECCCHHHHHHHHHHCT------TSEEECCCGGGGGG------SCCCEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHHhCC------CCeEEeCccccccc------CCCCeEEEEe
Confidence 78999999999988888877754 99999999999999998843 57899999876554 5689999999
Q ss_pred ccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCchHHHHHHHHhHHhhhcCCCCCCCCCCCCccCCccEEEEeecc
Q 018352 112 FQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKYQKNVEAYHNRSSSMKPNLVPNCIRSESYVITFEVE 191 (357)
Q Consensus 112 ~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~i~~~~~~~~~~~~~~~~~~~~~~fgn~i~~~~y~i~f~~~ 191 (357)
..++|+ + +.++...+++++.++|||||++++++++.... . .+..
T Consensus 109 ~~~l~~-~-~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~-------------------------------~--~~~~- 152 (203)
T 3h2b_A 109 WYSLIH-M-GPGELPDALVALRMAVEDGGGLLMSFFSGPSL-------------------------------E--PMYH- 152 (203)
T ss_dssp ESSSTT-C-CTTTHHHHHHHHHHTEEEEEEEEEEEECCSSC-------------------------------E--EECC-
T ss_pred hhhHhc-C-CHHHHHHHHHHHHHHcCCCcEEEEEEccCCch-------------------------------h--hhhc-
Confidence 999998 4 34567889999999999999999987664210 0 0100
Q ss_pred cCCCCccceeeEeEEcCCcccCcccccchHHHHHHHHHcCCEEEEecCch
Q 018352 192 EEKFPLFGKKYQLKFANDISAETQCLVHFPSLIRLAREAGLEYVEIQNLN 241 (357)
Q Consensus 192 ~~~~p~fG~~Y~f~L~~~~~~~~eylv~~~~l~~la~e~Glelv~~~~f~ 241 (357)
.. ...+..+.+.+.++++++||+++....+.
T Consensus 153 -----------------~~--~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 183 (203)
T 3h2b_A 153 -----------------PV--ATAYRWPLPELAQALETAGFQVTSSHWDP 183 (203)
T ss_dssp -----------------SS--SCEEECCHHHHHHHHHHTTEEEEEEEECT
T ss_pred -----------------hh--hhhccCCHHHHHHHHHHCCCcEEEEEecC
Confidence 00 01245578889999999999999987664
No 24
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.68 E-value=9.8e-16 Score=138.71 Aligned_cols=107 Identities=19% Similarity=0.279 Sum_probs=91.4
Q ss_pred CCCCEEEEECCCCChhHHHHHHhc-CCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~-~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
.++.+|||+|||+|..+..++... ..+++|+|+|+.+++.|+++..... ++.++++|+...++ . ++||+
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~~------~-~~fD~ 112 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL---KVKYIEADYSKYDF------E-EKYDM 112 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT---TEEEEESCTTTCCC------C-SCEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC---CEEEEeCchhccCC------C-CCceE
Confidence 367899999999998888887763 5699999999999999999986543 78999999987665 3 78999
Q ss_pred EEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCC
Q 018352 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
|+|..++|+ + +......++++++++|||||+++++.+.
T Consensus 113 v~~~~~l~~-~-~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 150 (234)
T 3dtn_A 113 VVSALSIHH-L-EDEDKKELYKRSYSILKESGIFINADLV 150 (234)
T ss_dssp EEEESCGGG-S-CHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEeCcccc-C-CHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 999999999 5 5556678999999999999999988543
No 25
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.68 E-value=7.4e-16 Score=138.22 Aligned_cols=111 Identities=14% Similarity=0.169 Sum_probs=90.4
Q ss_pred CCCCEEEEECCCCChhHHHHHHhc-CCeEEEEeCChHHHHHHHHHhHhcCCCc----eeEEEEcCCCCCchhhhhhhcCC
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNF----IAEFFEADPCAENFETQMQEKAN 104 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~-~~~v~GiDiS~~~l~~A~~r~~~~~~~~----~v~f~~~D~~~~~~~~~l~~~~~ 104 (357)
.++.+|||+|||+|..+..++... ..+|+|+|+|+.+++.|+++++..+... ++.|+++|+...+. ..+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~------~~~ 101 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDK------RFH 101 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCG------GGC
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccc------cCC
Confidence 356899999999998888887753 4699999999999999999987554332 68999999866554 357
Q ss_pred cccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 105 ~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
+||+|+|..++|+ + +.++...+++++.++|||||+++ ++++.
T Consensus 102 ~fD~v~~~~~l~~-~-~~~~~~~~l~~~~~~LkpgG~li-~~~~~ 143 (217)
T 3jwh_A 102 GYDAATVIEVIEH-L-DLSRLGAFERVLFEFAQPKIVIV-TTPNI 143 (217)
T ss_dssp SCSEEEEESCGGG-C-CHHHHHHHHHHHHTTTCCSEEEE-EEEBH
T ss_pred CcCEEeeHHHHHc-C-CHHHHHHHHHHHHHHcCCCEEEE-EccCc
Confidence 8999999999999 4 56667899999999999999555 45553
No 26
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.68 E-value=1.4e-15 Score=140.24 Aligned_cols=105 Identities=18% Similarity=0.284 Sum_probs=88.0
Q ss_pred CCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEE
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
.++.+|||||||+|..+..++... .+|+|+|+|+.|++.|+++.+..+.. ++.|+++|+...++ ++++||+|
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~l~~------~~~~fD~V 107 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFV-KKVVAFDLTEDILKVARAFIEGNGHQ-QVEYVQGDAEQMPF------TDERFHIV 107 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCC-CCCS------CTTCEEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEecHHhCCC------CCCCEEEE
Confidence 477899999999998777766554 49999999999999999998765432 68999999988766 56899999
Q ss_pred EEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEe
Q 018352 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 110 ~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~ 146 (357)
+|.+++|+ +.+ ...+++++.++|||||+|+++.
T Consensus 108 ~~~~~l~~-~~d---~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 108 TCRIAAHH-FPN---PASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp EEESCGGG-CSC---HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEhhhhHh-cCC---HHHHHHHHHHHcCCCCEEEEEE
Confidence 99999999 543 5688999999999999999873
No 27
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.68 E-value=2.2e-15 Score=143.08 Aligned_cols=177 Identities=15% Similarity=0.204 Sum_probs=122.9
Q ss_pred CCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEE
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
.++.+|||||||+|..+..++.....+|+|+|+|+.+++.|+++....+...++.++++|+.. + +++||+|
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~-------~~~fD~v 159 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWED--F-------AEPVDRI 159 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGG--C-------CCCCSEE
T ss_pred CCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHH--C-------CCCcCEE
Confidence 478899999999998888887763449999999999999999998876554568999999744 2 2689999
Q ss_pred EEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCchHHHHHHHHhHHhhhcCCCCCCCCCCCCccCCccEEEEee
Q 018352 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKYQKNVEAYHNRSSSMKPNLVPNCIRSESYVITFE 189 (357)
Q Consensus 110 ~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~i~~~~~~~~~~~~~~~~~~~~~~fgn~i~~~~y~i~f~ 189 (357)
+|..++|+ + ..++...+++++.++|||||++++.+++...... .... + +.+.+.
T Consensus 160 ~~~~~l~~-~-~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~-~~~~----------------~-------~~~~~~ 213 (318)
T 2fk8_A 160 VSIEAFEH-F-GHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYE-MAAR----------------G-------KKLSFE 213 (318)
T ss_dssp EEESCGGG-T-CGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHH-HHTT----------------C-------HHHHHH
T ss_pred EEeChHHh-c-CHHHHHHHHHHHHHhcCCCcEEEEEEeccCCchh-hhhc----------------c-------cccccc
Confidence 99999998 4 2356788999999999999999998766533211 0000 0 000000
Q ss_pred cccCCCCccceeeEeEEcCCcccCcccccchHHHHHHHHHcCCEEEEecCchHHHHhhHHHH
Q 018352 190 VEEEKFPLFGKKYQLKFANDISAETQCLVHFPSLIRLAREAGLEYVEIQNLNEFYDDNRALF 251 (357)
Q Consensus 190 ~~~~~~p~fG~~Y~f~L~~~~~~~~eylv~~~~l~~la~e~Glelv~~~~f~~f~~~~~~~~ 251 (357)
. .....|-.+|.| ...++.+.+.+.++++++||+++....+...|......|
T Consensus 214 ~--~~~~~~~~~~~~--------~~~~~~s~~~~~~~l~~aGf~~~~~~~~~~~y~~~~~~w 265 (318)
T 2fk8_A 214 T--ARFIKFIVTEIF--------PGGRLPSTEMMVEHGEKAGFTVPEPLSLRPHYIKTLRIW 265 (318)
T ss_dssp H--HHHHHHHHHHTS--------TTCCCCCHHHHHHHHHHTTCBCCCCEECHHHHHHHHHHH
T ss_pred c--cchhhHHHHhcC--------CCCcCCCHHHHHHHHHhCCCEEEEEEecchhHHHHHHHH
Confidence 0 000000011111 011455888999999999999999988887776544333
No 28
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.68 E-value=4.2e-16 Score=139.57 Aligned_cols=109 Identities=17% Similarity=0.171 Sum_probs=92.3
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhc--CCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcc
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETAL--IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~--~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~F 106 (357)
..++.+|||+|||+|..+..++... ..+|+|+|+|+.+++.|+++....+.. ++.++++|+...++ .+++|
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~------~~~~f 107 (219)
T 3dh0_A 35 LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLK-NVEVLKSEENKIPL------PDNTV 107 (219)
T ss_dssp CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECBTTBCSS------CSSCE
T ss_pred CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEecccccCCC------CCCCe
Confidence 4577899999999999888887764 469999999999999999998766443 68999999987665 46889
Q ss_pred cEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCC
Q 018352 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 107 DlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
|+|+|..++|+ +. +...+++++.++|||||+++++.++
T Consensus 108 D~v~~~~~l~~-~~---~~~~~l~~~~~~LkpgG~l~i~~~~ 145 (219)
T 3dh0_A 108 DFIFMAFTFHE-LS---EPLKFLEELKRVAKPFAYLAIIDWK 145 (219)
T ss_dssp EEEEEESCGGG-CS---SHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred eEEEeehhhhh-cC---CHHHHHHHHHHHhCCCeEEEEEEec
Confidence 99999999998 43 4578999999999999999988544
No 29
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.67 E-value=3e-16 Score=148.70 Aligned_cols=115 Identities=16% Similarity=0.136 Sum_probs=97.5
Q ss_pred HHcCCCCCEEEEECCCCChhHHHHH--HhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcC
Q 018352 26 KIYSHPYVTVCDLYCGAGVDVDKWE--TALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKA 103 (357)
Q Consensus 26 ~~~~~~~~~VLDlGCG~G~~l~k~~--~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~ 103 (357)
...+.++.+|||||||+|..+..++ ..+..+|+|+|+|+.+++.|+++....+...+++|+++|+...++ .
T Consensus 113 ~~~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~------~- 185 (305)
T 3ocj_A 113 QRHLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDT------R- 185 (305)
T ss_dssp HHHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCC------C-
T ss_pred HhhCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCc------c-
Confidence 4556788999999999998887763 335669999999999999999998776555569999999987655 3
Q ss_pred CcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCC
Q 018352 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 104 ~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
++||+|+|..++|+ +.+.+....+++++.++|||||++++....
T Consensus 186 ~~fD~v~~~~~~~~-~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 229 (305)
T 3ocj_A 186 EGYDLLTSNGLNIY-EPDDARVTELYRRFWQALKPGGALVTSFLT 229 (305)
T ss_dssp SCEEEEECCSSGGG-CCCHHHHHHHHHHHHHHEEEEEEEEEECCC
T ss_pred CCeEEEEECChhhh-cCCHHHHHHHHHHHHHhcCCCeEEEEEecC
Confidence 88999999999998 667787888999999999999999998644
No 30
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.67 E-value=4.3e-16 Score=138.59 Aligned_cols=119 Identities=15% Similarity=0.077 Sum_probs=97.4
Q ss_pred HHHHHHHcCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhh
Q 018352 21 KTALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQ 100 (357)
Q Consensus 21 ks~Li~~~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~ 100 (357)
...++..+..+..+|||+|||+|..+..++.....+|+|+|+|+.+++.|+++.+..+...++.++++|+...++
T Consensus 33 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~----- 107 (219)
T 3dlc_A 33 AENIINRFGITAGTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPI----- 107 (219)
T ss_dssp HHHHHHHHCCCEEEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSS-----
T ss_pred HHHHHHhcCCCCCEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCC-----
Confidence 344455544444499999999998888887775569999999999999999998876555579999999987665
Q ss_pred hcCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 101 EKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 101 ~~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
.+++||+|+|..++|+ +. +...+++++.++|||||++++..+..
T Consensus 108 -~~~~~D~v~~~~~l~~-~~---~~~~~l~~~~~~L~pgG~l~~~~~~~ 151 (219)
T 3dlc_A 108 -EDNYADLIVSRGSVFF-WE---DVATAFREIYRILKSGGKTYIGGGFG 151 (219)
T ss_dssp -CTTCEEEEEEESCGGG-CS---CHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred -CcccccEEEECchHhh-cc---CHHHHHHHHHHhCCCCCEEEEEeccC
Confidence 5689999999999999 43 45679999999999999999886554
No 31
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.67 E-value=7.3e-16 Score=138.30 Aligned_cols=111 Identities=18% Similarity=0.217 Sum_probs=89.8
Q ss_pred CCCCEEEEECCCCChhHHHHHHhc-CCeEEEEeCChHHHHHHHHHhHhcCCCc----eeEEEEcCCCCCchhhhhhhcCC
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNF----IAEFFEADPCAENFETQMQEKAN 104 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~-~~~v~GiDiS~~~l~~A~~r~~~~~~~~----~v~f~~~D~~~~~~~~~l~~~~~ 104 (357)
.++.+|||+|||+|..+..++... ..+|+|+|+|+.+++.|++++...+... +++|+++|+...+. ..+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~------~~~ 101 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDK------RFS 101 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCG------GGT
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccccccc------ccC
Confidence 357899999999998888776653 3699999999999999999986543322 68999999866554 457
Q ss_pred cccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 105 ~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
+||+|+|..++|+ + +.++...+++++.++|||||++ +++++.
T Consensus 102 ~fD~V~~~~~l~~-~-~~~~~~~~l~~~~~~LkpgG~~-i~~~~~ 143 (219)
T 3jwg_A 102 GYDAATVIEVIEH-L-DENRLQAFEKVLFEFTRPQTVI-VSTPNK 143 (219)
T ss_dssp TCSEEEEESCGGG-C-CHHHHHHHHHHHHTTTCCSEEE-EEEEBG
T ss_pred CCCEEEEHHHHHh-C-CHHHHHHHHHHHHHhhCCCEEE-EEccch
Confidence 8999999999999 4 5566789999999999999954 455553
No 32
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.67 E-value=8.3e-16 Score=137.73 Aligned_cols=200 Identities=15% Similarity=0.153 Sum_probs=129.6
Q ss_pred HHHHHcCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCC--Cchhhhhh
Q 018352 23 ALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCA--ENFETQMQ 100 (357)
Q Consensus 23 ~Li~~~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~--~~~~~~l~ 100 (357)
.++..+..++.+|||+|||+|..+..+...+ .+++|+|+|+.+++.|+++. ..++++|+.. .++
T Consensus 24 ~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~D~~~~~~~~~~~~~--------~~~~~~d~~~~~~~~----- 89 (230)
T 3cc8_A 24 NLLKHIKKEWKEVLDIGCSSGALGAAIKENG-TRVSGIEAFPEAAEQAKEKL--------DHVVLGDIETMDMPY----- 89 (230)
T ss_dssp HHHTTCCTTCSEEEEETCTTSHHHHHHHTTT-CEEEEEESSHHHHHHHHTTS--------SEEEESCTTTCCCCS-----
T ss_pred HHHHHhccCCCcEEEeCCCCCHHHHHHHhcC-CeEEEEeCCHHHHHHHHHhC--------CcEEEcchhhcCCCC-----
Confidence 3444433578899999999998888877764 79999999999999887654 2678899875 233
Q ss_pred hcCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCchHHHHHHHHhHHhhhcCCCCCCCCCCCCccC
Q 018352 101 EKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKYQKNVEAYHNRSSSMKPNLVPNCIR 180 (357)
Q Consensus 101 ~~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~i~~~~~~~~~~~~~~~~~~~~~~fgn~i~ 180 (357)
.+++||+|+|..++|+ +.+ ...+++++.++|+|||++++++|+......... .. . + .+.
T Consensus 90 -~~~~fD~v~~~~~l~~-~~~---~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~-~~---~--~------~~~---- 148 (230)
T 3cc8_A 90 -EEEQFDCVIFGDVLEH-LFD---PWAVIEKVKPYIKQNGVILASIPNVSHISVLAP-LL---A--G------NWT---- 148 (230)
T ss_dssp -CTTCEEEEEEESCGGG-SSC---HHHHHHHTGGGEEEEEEEEEEEECTTSHHHHHH-HH---T--T------CCC----
T ss_pred -CCCccCEEEECChhhh-cCC---HHHHHHHHHHHcCCCCEEEEEeCCcchHHHHHH-Hh---c--C------Cce----
Confidence 4578999999999998 433 458899999999999999999988754322111 00 0 0 000
Q ss_pred CccEEEEeecccCCCCccceeeEeEEcCCcccCcccccchHHHHHHHHHcCCEEEEecCchHHH---HhhHHHHHHHHHh
Q 018352 181 SESYVITFEVEEEKFPLFGKKYQLKFANDISAETQCLVHFPSLIRLAREAGLEYVEIQNLNEFY---DDNRALFAGMLMS 257 (357)
Q Consensus 181 ~~~y~i~f~~~~~~~p~fG~~Y~f~L~~~~~~~~eylv~~~~l~~la~e~Glelv~~~~f~~f~---~~~~~~~~~~~~~ 257 (357)
+ . . .|. +. .......+.+.+.++++++||+.+....+...+ ......+..++.+
T Consensus 149 ---~----~--~-----~~~-----~~----~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 205 (230)
T 3cc8_A 149 ---Y----T--E-----YGL-----LD----KTHIRFFTFNEMLRMFLKAGYSISKVDRVYVDHKMYEPLIEELYGICKK 205 (230)
T ss_dssp ---C----B--S-----SST-----TB----TTCCCCCCHHHHHHHHHHTTEEEEEEEEEECCCGGGHHHHHHHHHHHHH
T ss_pred ---e----c--c-----CCC-----CC----cceEEEecHHHHHHHHHHcCCeEEEEEecccChhhccchHHHHHHHHHh
Confidence 0 0 0 000 00 001134578889999999999998776543332 2223334445555
Q ss_pred cCCCCCCCCCCCChhHHHHHhhheeEEEEec
Q 018352 258 AGPNLIDPRGRLLPRSYDVLGLYSTFIFQKP 288 (357)
Q Consensus 258 ~~~~~~~~~g~l~~~e~e~~~lY~~f~F~K~ 288 (357)
++.. ...-.+..+...+..-+|+
T Consensus 206 ~~~~--------~~~~~~~~~~~~~v~a~k~ 228 (230)
T 3cc8_A 206 YRLG--------SGFMAETVVFQYIIEAEKS 228 (230)
T ss_dssp TTCC--------SCHHHHHTEEEEEEEEEEC
T ss_pred hccc--------cccCCCcceEEEEEEeecc
Confidence 4421 2344555555555555554
No 33
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.67 E-value=2.8e-16 Score=143.28 Aligned_cols=145 Identities=20% Similarity=0.228 Sum_probs=109.2
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCC--chhhhhhhcCCcc
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAE--NFETQMQEKANQA 106 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~--~~~~~l~~~~~~F 106 (357)
++++.+|||||||+|..+..+...+. +|+|+|+|+.+++.|+++ +.++.+|+... ++ .+++|
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~---------~~~~~~d~~~~~~~~------~~~~f 102 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEEGI-ESIGVDINEDMIKFCEGK---------FNVVKSDAIEYLKSL------PDKYL 102 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHHTC-CEEEECSCHHHHHHHHTT---------SEEECSCHHHHHHTS------CTTCB
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhCCC-cEEEEECCHHHHHHHHhh---------cceeeccHHHHhhhc------CCCCe
Confidence 35778999999999988877776654 899999999999998766 56778876442 22 45899
Q ss_pred cEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCchHHHHHHHHhHHhhhcCCCCCCCCCCCCccCCccEEE
Q 018352 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKYQKNVEAYHNRSSSMKPNLVPNCIRSESYVI 186 (357)
Q Consensus 107 DlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~i~~~~~~~~~~~~~~~~~~~~~~fgn~i~~~~y~i 186 (357)
|+|+|..++|+ + ..++...+++++.++|||||++++.+++...+...... |
T Consensus 103 D~i~~~~~l~~-~-~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~-------------------------~-- 153 (240)
T 3dli_A 103 DGVMISHFVEH-L-DPERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINF-------------------------Y-- 153 (240)
T ss_dssp SEEEEESCGGG-S-CGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHH-------------------------T--
T ss_pred eEEEECCchhh-C-CcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHH-------------------------h--
Confidence 99999999998 4 34456889999999999999999999887554332110 0
Q ss_pred EeecccCCCCccceeeEeEEcCCcccCcccccchHHHHHHHHHcCCEEEEecCch
Q 018352 187 TFEVEEEKFPLFGKKYQLKFANDISAETQCLVHFPSLIRLAREAGLEYVEIQNLN 241 (357)
Q Consensus 187 ~f~~~~~~~p~fG~~Y~f~L~~~~~~~~eylv~~~~l~~la~e~Glelv~~~~f~ 241 (357)
..+ . ..+..+.+.+.++++++||+.+....+.
T Consensus 154 -------~~~------------~----~~~~~~~~~l~~~l~~aGf~~~~~~~~~ 185 (240)
T 3dli_A 154 -------IDP------------T----HKKPVHPETLKFILEYLGFRDVKIEFFE 185 (240)
T ss_dssp -------TST------------T----CCSCCCHHHHHHHHHHHTCEEEEEEEEC
T ss_pred -------cCc------------c----ccccCCHHHHHHHHHHCCCeEEEEEEec
Confidence 000 0 0134466889999999999999877654
No 34
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.67 E-value=3.9e-16 Score=141.73 Aligned_cols=108 Identities=20% Similarity=0.263 Sum_probs=88.6
Q ss_pred CCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEEE
Q 018352 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~ 110 (357)
+..+|||+|||+|..+..++. ...+|+|+|+|+.+++.|+++........+++|+++|+..... ..+||+|+
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-------~~~fD~v~ 137 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMAS-PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRP-------TELFDLIF 137 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCB-TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCC-------SSCEEEEE
T ss_pred CCCCEEEeCCCCCHHHHHHHh-CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCC-------CCCeeEEE
Confidence 456999999999988776644 4458999999999999999998764333479999999987542 46899999
Q ss_pred EccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCC
Q 018352 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 111 ~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
|..++|+ + +.++...+++++.++|||||++++...+
T Consensus 138 ~~~~l~~-~-~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 173 (235)
T 3lcc_A 138 DYVFFCA-I-EPEMRPAWAKSMYELLKPDGELITLMYP 173 (235)
T ss_dssp EESSTTT-S-CGGGHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EChhhhc-C-CHHHHHHHHHHHHHHCCCCcEEEEEEec
Confidence 9999998 4 3556789999999999999999986443
No 35
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.66 E-value=6.7e-16 Score=138.13 Aligned_cols=108 Identities=20% Similarity=0.234 Sum_probs=93.0
Q ss_pred CCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEEE
Q 018352 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~ 110 (357)
++.+|||+|||+|..+..++... .+|+|+|+|+.+++.|+++..... +++|+++|+.... .+++||+|+
T Consensus 51 ~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~-------~~~~fD~v~ 119 (216)
T 3ofk_A 51 AVSNGLEIGCAAGAFTEKLAPHC-KRLTVIDVMPRAIGRACQRTKRWS---HISWAATDILQFS-------TAELFDLIV 119 (216)
T ss_dssp SEEEEEEECCTTSHHHHHHGGGE-EEEEEEESCHHHHHHHHHHTTTCS---SEEEEECCTTTCC-------CSCCEEEEE
T ss_pred CCCcEEEEcCCCCHHHHHHHHcC-CEEEEEECCHHHHHHHHHhcccCC---CeEEEEcchhhCC-------CCCCccEEE
Confidence 56799999999998888776665 499999999999999999986542 7899999997754 257899999
Q ss_pred EccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCch
Q 018352 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (357)
Q Consensus 111 ~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~ 150 (357)
|..++|| +.+.+....+++++.++|||||+++++++...
T Consensus 120 ~~~~l~~-~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 158 (216)
T 3ofk_A 120 VAEVLYY-LEDMTQMRTAIDNMVKMLAPGGHLVFGSARDA 158 (216)
T ss_dssp EESCGGG-SSSHHHHHHHHHHHHHTEEEEEEEEEEEECHH
T ss_pred EccHHHh-CCCHHHHHHHHHHHHHHcCCCCEEEEEecCCC
Confidence 9999999 66777788999999999999999999877654
No 36
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.66 E-value=9.3e-16 Score=139.00 Aligned_cols=126 Identities=18% Similarity=0.256 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHHcCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCc
Q 018352 15 RLYEFAKTALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAEN 94 (357)
Q Consensus 15 ~~~nwvks~Li~~~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~ 94 (357)
.+..++...+ .....++.+|||+|||+|..+..++..+ .+++|+|+|+.|++.|+++....+. ++.++++|+...+
T Consensus 22 ~~~~~~~~~l-~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~ 97 (246)
T 1y8c_A 22 KWSDFIIEKC-VENNLVFDDYLDLACGTGNLTENLCPKF-KNTWAVDLSQEMLSEAENKFRSQGL--KPRLACQDISNLN 97 (246)
T ss_dssp HHHHHHHHHH-HTTTCCTTEEEEETCTTSTTHHHHGGGS-SEEEEECSCHHHHHHHHHHHHHTTC--CCEEECCCGGGCC
T ss_pred HHHHHHHHHH-HHhCCCCCeEEEeCCCCCHHHHHHHHCC-CcEEEEECCHHHHHHHHHHHhhcCC--CeEEEecccccCC
Confidence 3444544443 3333467899999999998888776664 4899999999999999999876533 6889999987655
Q ss_pred hhhhhhhcCCcccEEEEcc-chhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCchHH
Q 018352 95 FETQMQEKANQADLVCCFQ-HLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTI 152 (357)
Q Consensus 95 ~~~~l~~~~~~FDlV~~~~-~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~i 152 (357)
+ . ++||+|+|.. ++|| +.+.++...++++++++|+|||++++.+++...+
T Consensus 98 ~------~-~~fD~v~~~~~~l~~-~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 148 (246)
T 1y8c_A 98 I------N-RKFDLITCCLDSTNY-IIDSDDLKKYFKAVSNHLKEGGVFIFDINSYYKL 148 (246)
T ss_dssp C------S-CCEEEEEECTTGGGG-CCSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHH
T ss_pred c------c-CCceEEEEcCccccc-cCCHHHHHHHHHHHHHhcCCCcEEEEEecCHHHH
Confidence 4 3 7899999998 9999 5566788999999999999999999999987654
No 37
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.66 E-value=5.2e-16 Score=142.32 Aligned_cols=108 Identities=16% Similarity=0.119 Sum_probs=93.6
Q ss_pred CCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEE
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
.++.+|||||||+|..+..++.....+|+|+|+|+.+++.|+++....+...+++++++|+...++ .+++||+|
T Consensus 45 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~------~~~~fD~v 118 (257)
T 3f4k_A 45 TDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPF------QNEELDLI 118 (257)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSS------CTTCEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCC------CCCCEEEE
Confidence 467899999999999888888776569999999999999999998876655569999999977665 46899999
Q ss_pred EEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCC
Q 018352 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 110 ~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
+|..++|+ + +...+++++.++|||||+++++.++
T Consensus 119 ~~~~~l~~-~----~~~~~l~~~~~~L~pgG~l~~~~~~ 152 (257)
T 3f4k_A 119 WSEGAIYN-I----GFERGMNEWSKYLKKGGFIAVSEAS 152 (257)
T ss_dssp EEESCSCC-C----CHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred EecChHhh-c----CHHHHHHHHHHHcCCCcEEEEEEee
Confidence 99999998 3 2567999999999999999998754
No 38
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.66 E-value=3.5e-16 Score=145.24 Aligned_cols=109 Identities=13% Similarity=0.094 Sum_probs=87.6
Q ss_pred CCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHh----------c------CCCceeEEEEcCCCCC
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWEN----------Q------RKNFIAEFFEADPCAE 93 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~----------~------~~~~~v~f~~~D~~~~ 93 (357)
.++.+|||+|||+|.++..++..+. +|+|+|+|+.||+.|+++... . ....+++|+++|+...
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADRGH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHTTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCCCeEEEeCCCCcHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 4678999999999999888877765 999999999999999887641 0 0123789999999875
Q ss_pred chhhhhhhcCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEe
Q 018352 94 NFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 94 ~~~~~l~~~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~ 146 (357)
+.. ..++||+|++..++++ + +.+....++++++++|||||+|++.+
T Consensus 146 ~~~-----~~~~FD~V~~~~~l~~-l-~~~~~~~~l~~~~~~LkpGG~l~l~~ 191 (252)
T 2gb4_A 146 PRA-----NIGKFDRIWDRGALVA-I-NPGDHDRYADIILSLLRKEFQYLVAV 191 (252)
T ss_dssp GGG-----CCCCEEEEEESSSTTT-S-CGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred Ccc-----cCCCEEEEEEhhhhhh-C-CHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 541 1278999999998888 4 45567789999999999999997553
No 39
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.65 E-value=5.8e-16 Score=143.46 Aligned_cols=108 Identities=16% Similarity=0.124 Sum_probs=93.8
Q ss_pred CCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEE
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
.++.+|||||||+|..+..++..+..+|+|+|+|+.+++.|+++.+..+...+++|+++|+...++ ..++||+|
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~------~~~~fD~i 118 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPF------RNEELDLI 118 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCC------CTTCEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCC------CCCCEEEE
Confidence 478899999999999888887776669999999999999999998876655579999999987665 46899999
Q ss_pred EEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCC
Q 018352 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 110 ~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
+|..++|+ + +...+++++.++|||||+++++.++
T Consensus 119 ~~~~~~~~-~----~~~~~l~~~~~~LkpgG~l~~~~~~ 152 (267)
T 3kkz_A 119 WSEGAIYN-I----GFERGLNEWRKYLKKGGYLAVSECS 152 (267)
T ss_dssp EESSCGGG-T----CHHHHHHHHGGGEEEEEEEEEEEEE
T ss_pred EEcCCcee-c----CHHHHHHHHHHHcCCCCEEEEEEee
Confidence 99999998 3 3577899999999999999998654
No 40
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.65 E-value=1.9e-15 Score=138.36 Aligned_cols=120 Identities=27% Similarity=0.389 Sum_probs=94.4
Q ss_pred HHHHHHHHHHcCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhh
Q 018352 18 EFAKTALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET 97 (357)
Q Consensus 18 nwvks~Li~~~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~ 97 (357)
+|+...+-.....++.+|||+|||+|..+..++..+ .+|+|+|+|+.|++.|+++....+. ++.++++|+...++
T Consensus 28 ~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~--~v~~~~~d~~~~~~-- 102 (252)
T 1wzn_A 28 DFVEEIFKEDAKREVRRVLDLACGTGIPTLELAERG-YEVVGLDLHEEMLRVARRKAKERNL--KIEFLQGDVLEIAF-- 102 (252)
T ss_dssp HHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTC--CCEEEESCGGGCCC--
T ss_pred HHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHCC-CeEEEEECCHHHHHHHHHHHHhcCC--ceEEEECChhhccc--
Confidence 444443332223467899999999998888887765 4999999999999999999876533 68999999876543
Q ss_pred hhhhcCCcccEEEEccc-hhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 98 QMQEKANQADLVCCFQH-LQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 98 ~l~~~~~~FDlV~~~~~-lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
.++||+|+|.++ +++ + +.++...+++++.++|+|||++++.+|+.
T Consensus 103 -----~~~fD~v~~~~~~~~~-~-~~~~~~~~l~~~~~~L~pgG~li~~~~~~ 148 (252)
T 1wzn_A 103 -----KNEFDAVTMFFSTIMY-F-DEEDLRKLFSKVAEALKPGGVFITDFPCW 148 (252)
T ss_dssp -----CSCEEEEEECSSGGGG-S-CHHHHHHHHHHHHHHEEEEEEEEEEEEC-
T ss_pred -----CCCccEEEEcCCchhc-C-CHHHHHHHHHHHHHHcCCCeEEEEeccch
Confidence 368999999765 444 4 67788999999999999999999988873
No 41
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.65 E-value=9.6e-16 Score=140.45 Aligned_cols=109 Identities=20% Similarity=0.218 Sum_probs=92.0
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
..++.+|||||||+|..+..++.....+++|+|+|+.|++.|+++.+..+...++.|+++|+...++ +++||+
T Consensus 34 ~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-------~~~fD~ 106 (256)
T 1nkv_A 34 MKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-------NEKCDV 106 (256)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-------SSCEEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-------CCCCCE
Confidence 4578899999999998888887765559999999999999999998776554479999999977543 478999
Q ss_pred EEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCC
Q 018352 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
|+|..++|+ +. +...+|++++++|||||+++++.+.
T Consensus 107 V~~~~~~~~-~~---~~~~~l~~~~r~LkpgG~l~~~~~~ 142 (256)
T 1nkv_A 107 AACVGATWI-AG---GFAGAEELLAQSLKPGGIMLIGEPY 142 (256)
T ss_dssp EEEESCGGG-TS---SSHHHHHHHTTSEEEEEEEEEEEEE
T ss_pred EEECCChHh-cC---CHHHHHHHHHHHcCCCeEEEEecCc
Confidence 999999988 43 3678899999999999999998654
No 42
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.64 E-value=1.6e-15 Score=142.96 Aligned_cols=112 Identities=14% Similarity=0.137 Sum_probs=90.7
Q ss_pred CCCCCEEEEECCCCChhHHHHHH--hcCCeEEEEeCChHHHHHHHHHhHhc-CCCceeEEEEcCCCCCchhhhhhhcCCc
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWET--ALIANYIGIDVATSGIGEARDTWENQ-RKNFIAEFFEADPCAENFETQMQEKANQ 105 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~--~~~~~v~GiDiS~~~l~~A~~r~~~~-~~~~~v~f~~~D~~~~~~~~~l~~~~~~ 105 (357)
..++.+|||||||+|..+..++. .+..+|+|+|+|+.+++.|+++.+.. ....+++|+++|+...++........++
T Consensus 34 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 113 (299)
T 3g5t_A 34 DGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQK 113 (299)
T ss_dssp CSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSC
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCC
Confidence 45789999999999998888876 46779999999999999999998764 2234799999999886652100001279
Q ss_pred ccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 106 FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
||+|+|..++|+ + +...+++++.++|||||++++.
T Consensus 114 fD~V~~~~~l~~-~----~~~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 114 IDMITAVECAHW-F----DFEKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp EEEEEEESCGGG-S----CHHHHHHHHHHHEEEEEEEEEE
T ss_pred eeEEeHhhHHHH-h----CHHHHHHHHHHhcCCCcEEEEE
Confidence 999999999999 4 4678999999999999999873
No 43
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.64 E-value=3.6e-15 Score=132.85 Aligned_cols=105 Identities=20% Similarity=0.142 Sum_probs=88.2
Q ss_pred CCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEE
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
.++.+|||+|||+|..+..++..+ .+|+|+|+|+.+++.|++ .. ..++.++++|+... + ..++||+|
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~~D~s~~~~~~a~~--~~---~~~~~~~~~d~~~~-~------~~~~~D~v 111 (218)
T 3ou2_A 45 NIRGDVLELASGTGYWTRHLSGLA-DRVTALDGSAEMIAEAGR--HG---LDNVEFRQQDLFDW-T------PDRQWDAV 111 (218)
T ss_dssp TSCSEEEEESCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHGG--GC---CTTEEEEECCTTSC-C------CSSCEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhcC-CeEEEEeCCHHHHHHHHh--cC---CCCeEEEecccccC-C------CCCceeEE
Confidence 467899999999998888887774 499999999999999987 11 13689999999775 3 46899999
Q ss_pred EEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 110 ~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
+|..++|+ + ..+....++++++++|||||+++++.++.
T Consensus 112 ~~~~~l~~-~-~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 112 FFAHWLAH-V-PDDRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp EEESCGGG-S-CHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred EEechhhc-C-CHHHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 99999999 4 34557899999999999999999997665
No 44
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.64 E-value=1.3e-15 Score=135.79 Aligned_cols=115 Identities=20% Similarity=0.277 Sum_probs=95.0
Q ss_pred HHHHHcCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhc
Q 018352 23 ALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEK 102 (357)
Q Consensus 23 ~Li~~~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~ 102 (357)
.++..+..++.+|||+|||+|..+..+ +..+++|+|+|+.|++.|+++. . ++.++++|+...++ .
T Consensus 28 ~~l~~~~~~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~--~----~~~~~~~d~~~~~~------~ 92 (211)
T 2gs9_A 28 RALKGLLPPGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA--P----EATWVRAWGEALPF------P 92 (211)
T ss_dssp HHHHTTCCCCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC--T----TSEEECCCTTSCCS------C
T ss_pred HHHHHhcCCCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC--C----CcEEEEcccccCCC------C
Confidence 456666678899999999999777665 4448999999999999999887 2 57889999887665 4
Q ss_pred CCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCchHHHHHH
Q 018352 103 ANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKY 156 (357)
Q Consensus 103 ~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~i~~~~ 156 (357)
+++||+|+|..++|+ +. +..++++++.++|||||++++++++....+...
T Consensus 93 ~~~fD~v~~~~~l~~-~~---~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~ 142 (211)
T 2gs9_A 93 GESFDVVLLFTTLEF-VE---DVERVLLEARRVLRPGGALVVGVLEALSPWAAL 142 (211)
T ss_dssp SSCEEEEEEESCTTT-CS---CHHHHHHHHHHHEEEEEEEEEEEECTTSHHHHH
T ss_pred CCcEEEEEEcChhhh-cC---CHHHHHHHHHHHcCCCCEEEEEecCCcCcHHHH
Confidence 678999999999998 43 466899999999999999999998886665544
No 45
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.64 E-value=2.2e-15 Score=135.19 Aligned_cols=115 Identities=23% Similarity=0.304 Sum_probs=95.5
Q ss_pred HHcCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCc
Q 018352 26 KIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQ 105 (357)
Q Consensus 26 ~~~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~ 105 (357)
..+++++.+|||+|||+|..+..++.... +++|+|+|+.+++.|+++.+... .+++++++|+...++ ..++
T Consensus 33 ~~~~~~~~~vLDlG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~------~~~~ 103 (227)
T 1ve3_A 33 MKYMKKRGKVLDLACGVGGFSFLLEDYGF-EVVGVDISEDMIRKAREYAKSRE--SNVEFIVGDARKLSF------EDKT 103 (227)
T ss_dssp HHSCCSCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCTTSCCS------CTTC
T ss_pred HHhcCCCCeEEEEeccCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcC--CCceEEECchhcCCC------CCCc
Confidence 34556688999999999988877766655 99999999999999999887653 378999999987554 4578
Q ss_pred ccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCchH
Q 018352 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSST 151 (357)
Q Consensus 106 FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~ 151 (357)
||+|+|..++|+ + +..+...++++++++|+|||++++..++...
T Consensus 104 ~D~v~~~~~~~~-~-~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 147 (227)
T 1ve3_A 104 FDYVIFIDSIVH-F-EPLELNQVFKEVRRVLKPSGKFIMYFTDLRE 147 (227)
T ss_dssp EEEEEEESCGGG-C-CHHHHHHHHHHHHHHEEEEEEEEEEEECHHH
T ss_pred EEEEEEcCchHh-C-CHHHHHHHHHHHHHHcCCCcEEEEEecChHH
Confidence 999999988665 2 5677889999999999999999999888643
No 46
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.64 E-value=2.3e-15 Score=143.07 Aligned_cols=109 Identities=16% Similarity=0.109 Sum_probs=94.3
Q ss_pred CCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEE
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
.++.+|||+|||+|..+..++.....+|+|+|+|+.+++.|+++.+..+...+++|+++|+...++ .+++||+|
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~------~~~~fD~V 189 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPF------DKGAVTAS 189 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCC------CTTCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCC------CCCCEeEE
Confidence 467899999999998888887763469999999999999999998877655579999999987665 46899999
Q ss_pred EEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 110 ~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
+|..++|+ + + ...+++++.++|||||++++++++.
T Consensus 190 ~~~~~l~~-~-~---~~~~l~~~~~~LkpgG~l~~~~~~~ 224 (312)
T 3vc1_A 190 WNNESTMY-V-D---LHDLFSEHSRFLKVGGRYVTITGCW 224 (312)
T ss_dssp EEESCGGG-S-C---HHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred EECCchhh-C-C---HHHHHHHHHHHcCCCcEEEEEEccc
Confidence 99999998 4 3 7889999999999999999887654
No 47
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.64 E-value=5.4e-15 Score=134.91 Aligned_cols=108 Identities=19% Similarity=0.284 Sum_probs=89.9
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
..++.+|||+|||+|..+..++... .+|+|+|+|+.|++.|+++....+.. ++.|+++|+...++ .+++||+
T Consensus 19 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~------~~~~fD~ 90 (239)
T 1xxl_A 19 CRAEHRVLDIGAGAGHTALAFSPYV-QECIGVDATKEMVEVASSFAQEKGVE-NVRFQQGTAESLPF------PDDSFDI 90 (239)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHHHHTCC-SEEEEECBTTBCCS------CTTCEEE
T ss_pred cCCCCEEEEEccCcCHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHHHcCCC-CeEEEecccccCCC------CCCcEEE
Confidence 4578899999999998777776554 49999999999999999988765432 68999999977665 4689999
Q ss_pred EEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCC
Q 018352 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
|+|..++|+ +. +...+++++.++|||||+++++.+.
T Consensus 91 v~~~~~l~~-~~---~~~~~l~~~~~~LkpgG~l~~~~~~ 126 (239)
T 1xxl_A 91 ITCRYAAHH-FS---DVRKAVREVARVLKQDGRFLLVDHY 126 (239)
T ss_dssp EEEESCGGG-CS---CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEECCchhh-cc---CHHHHHHHHHHHcCCCcEEEEEEcC
Confidence 999999998 53 3568899999999999999987443
No 48
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.64 E-value=1.5e-15 Score=137.77 Aligned_cols=114 Identities=17% Similarity=0.245 Sum_probs=96.1
Q ss_pred HcCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcc
Q 018352 27 IYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (357)
Q Consensus 27 ~~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~F 106 (357)
..++++.+|||+|||+|..+..++.. .+++|+|+|+.+++.|+++....+ .++.++++|+...++ .++|
T Consensus 29 ~~~~~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~-------~~~f 97 (243)
T 3d2l_A 29 EQVEPGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETN--RHVDFWVQDMRELEL-------PEPV 97 (243)
T ss_dssp HHSCTTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCGGGCCC-------SSCE
T ss_pred HHcCCCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcC--CceEEEEcChhhcCC-------CCCc
Confidence 44667899999999999887777655 699999999999999999987543 368999999876544 3789
Q ss_pred cEEEEcc-chhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCchHH
Q 018352 107 DLVCCFQ-HLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTI 152 (357)
Q Consensus 107 DlV~~~~-~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~i 152 (357)
|+|+|.. ++|| +.+.++...+++++.++|+|||++++.+++...+
T Consensus 98 D~v~~~~~~~~~-~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 143 (243)
T 3d2l_A 98 DAITILCDSLNY-LQTEADVKQTFDSAARLLTDGGKLLFDVHSPYKM 143 (243)
T ss_dssp EEEEECTTGGGG-CCSHHHHHHHHHHHHHHEEEEEEEEEEEECHHHH
T ss_pred CEEEEeCCchhh-cCCHHHHHHHHHHHHHhcCCCeEEEEEcCCHHHH
Confidence 9999987 8898 5577889999999999999999999999887554
No 49
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.63 E-value=3.3e-15 Score=131.39 Aligned_cols=126 Identities=13% Similarity=0.011 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHHcCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCch
Q 018352 16 LYEFAKTALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENF 95 (357)
Q Consensus 16 ~~nwvks~Li~~~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~ 95 (357)
+..++...+......++.+|||+|||+|..+..++..+..+|+|+|+|+.|++.|+++.+..+. .+++++++|+.....
T Consensus 29 ~~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~ 107 (189)
T 3p9n_A 29 VRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGL-SGATLRRGAVAAVVA 107 (189)
T ss_dssp HHHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTC-SCEEEEESCHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCC-CceEEEEccHHHHHh
Confidence 3344444443333346789999999999888877777777999999999999999999877654 478999999754221
Q ss_pred hhhhhhcCCcccEEEEccchhhccCCHHHHHHHHHHHHh--cccCCcEEEEEeCCc
Q 018352 96 ETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSS--LLKPGGYFLGITPDS 149 (357)
Q Consensus 96 ~~~l~~~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~--~LkpGG~fi~t~pd~ 149 (357)
.+ ..++||+|++...+|+ ..+....+++.+.+ +|+|||++++.++..
T Consensus 108 --~~--~~~~fD~i~~~~p~~~---~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 108 --AG--TTSPVDLVLADPPYNV---DSADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp --HC--CSSCCSEEEECCCTTS---CHHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred --hc--cCCCccEEEECCCCCc---chhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 11 2578999999887666 34678889999999 999999999987654
No 50
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.63 E-value=1.3e-15 Score=135.18 Aligned_cols=111 Identities=16% Similarity=0.157 Sum_probs=92.0
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
..++.+|||+|||+|..+..++.....+|+|+|+|+.|++.|+++..... .++.++++|+...++ ++++||+
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~------~~~~fD~ 92 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENN--FKLNISKGDIRKLPF------KDESMSF 92 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHT--CCCCEEECCTTSCCS------CTTCEEE
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcC--CceEEEECchhhCCC------CCCceeE
Confidence 45678999999999977455545555699999999999999999887543 268899999987665 4678999
Q ss_pred EEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
|+|..++|+ + +.++...++++++++|||||++++..++.
T Consensus 93 v~~~~~l~~-~-~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 131 (209)
T 2p8j_A 93 VYSYGTIFH-M-RKNDVKEAIDEIKRVLKPGGLACINFLTT 131 (209)
T ss_dssp EEECSCGGG-S-CHHHHHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred EEEcChHHh-C-CHHHHHHHHHHHHHHcCCCcEEEEEEecc
Confidence 999999988 4 46788999999999999999999987653
No 51
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.62 E-value=1.4e-15 Score=142.68 Aligned_cols=114 Identities=17% Similarity=0.124 Sum_probs=84.0
Q ss_pred CCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCC-----------------------------c
Q 018352 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKN-----------------------------F 81 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~-----------------------------~ 81 (357)
++.+|||||||+|............+|+|+|+|+.|++.|+++.+..... .
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 150 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRAR 150 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhh
Confidence 67899999999997332222234569999999999999998865431100 0
Q ss_pred eeEEEEcCCCC-CchhhhhhhcCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 82 IAEFFEADPCA-ENFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 82 ~v~f~~~D~~~-~~~~~~l~~~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
.+.++++|+.. .++... ..++++||+|+|.+++|++..+.++..++|++++++|||||+|+++
T Consensus 151 ~~~~~~~D~~~~~~~~~~-~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~ 214 (289)
T 2g72_A 151 VKRVLPIDVHQPQPLGAG-SPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLI 214 (289)
T ss_dssp EEEEECCCTTSSSTTCSS-CSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred hceEEecccCCCCCcccc-ccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 25677889876 433110 0034679999999999985555678899999999999999999987
No 52
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.62 E-value=2.7e-15 Score=131.08 Aligned_cols=118 Identities=10% Similarity=0.034 Sum_probs=88.2
Q ss_pred HHHHcCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcC
Q 018352 24 LIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKA 103 (357)
Q Consensus 24 Li~~~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~ 103 (357)
++...+.++.+|||+|||+|..+..++.. ..+|+|+|+|+.|++.|+++.+..+. .+++|++.|...... . .+
T Consensus 15 ~l~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~~~~~l~~---~--~~ 87 (185)
T 3mti_A 15 FLAEVLDDESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGI-ENTELILDGHENLDH---Y--VR 87 (185)
T ss_dssp HHHTTCCTTCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTC-CCEEEEESCGGGGGG---T--CC
T ss_pred HHHHhCCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCcHHHHHh---h--cc
Confidence 34556778899999999999888887766 67999999999999999999887654 478899866543211 1 35
Q ss_pred CcccEEEEccch-hh----ccCCHHHHHHHHHHHHhcccCCcEEEEEeCC
Q 018352 104 NQADLVCCFQHL-QM----CFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 104 ~~FDlV~~~~~l-h~----~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
++||+|++.... +. .....+....+++++.++|||||++++....
T Consensus 88 ~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 88 EPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp SCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred CCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 789999876422 11 1113466778999999999999999988543
No 53
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.62 E-value=7e-16 Score=140.59 Aligned_cols=112 Identities=16% Similarity=0.008 Sum_probs=88.1
Q ss_pred HcCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCC--chhhhhhhcCC
Q 018352 27 IYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAE--NFETQMQEKAN 104 (357)
Q Consensus 27 ~~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~--~~~~~l~~~~~ 104 (357)
....++.+|||||||+|..+..++..+..+|+|+|+|+.|++.|+++.+..+ .++.++++|+... ++ .++
T Consensus 56 ~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~------~~~ 127 (236)
T 1zx0_A 56 AASSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTL------PDG 127 (236)
T ss_dssp HHTTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGS------CTT
T ss_pred hcCCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcC--CCeEEEecCHHHhhccc------CCC
Confidence 3346788999999999988887755555689999999999999999887653 4789999998653 33 458
Q ss_pred cccEEEE-ccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEe
Q 018352 105 QADLVCC-FQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 105 ~FDlV~~-~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~ 146 (357)
+||+|++ .++++....+......++++++++|||||+|++..
T Consensus 128 ~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 128 HFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred ceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 9999999 66543222245566788999999999999998764
No 54
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.62 E-value=4.4e-15 Score=131.04 Aligned_cols=120 Identities=16% Similarity=0.116 Sum_probs=94.5
Q ss_pred HHHHcCCCCCEEEEECCCCChhHHHHHHh--cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh
Q 018352 24 LIKIYSHPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE 101 (357)
Q Consensus 24 Li~~~~~~~~~VLDlGCG~G~~l~k~~~~--~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~ 101 (357)
++...+.++.+|||+|||+|..+..++.. +..+|+|+|+|+.+++.|+++++..+...+++++++|+..... .
T Consensus 15 ~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-----~ 89 (197)
T 3eey_A 15 YIKMFVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDK-----Y 89 (197)
T ss_dssp HHHHHCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGG-----T
T ss_pred HHHhcCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhh-----h
Confidence 44456678899999999999888888776 4569999999999999999998876544579999999855331 0
Q ss_pred cCCcccEEEEccch-----hhccCCHHHHHHHHHHHHhcccCCcEEEEEeCC
Q 018352 102 KANQADLVCCFQHL-----QMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 102 ~~~~FDlV~~~~~l-----h~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
.+++||+|++...+ +......+....+++++.++|||||++++....
T Consensus 90 ~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 90 IDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYY 141 (197)
T ss_dssp CCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence 34789999988754 222345666778999999999999999988543
No 55
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.62 E-value=3.3e-15 Score=133.79 Aligned_cols=105 Identities=16% Similarity=0.111 Sum_probs=88.9
Q ss_pred CCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEE
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
.++.+|||+|||+|..+..++..+ .+++|+|+|+.+++.|+++.. .++.++++|+...++ . ++||+|
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~d~~~~~~------~-~~fD~v 110 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLLAG-RTVYGIEPSREMRMIAKEKLP-----KEFSITEGDFLSFEV------P-TSIDTI 110 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHHTT-CEEEEECSCHHHHHHHHHHSC-----TTCCEESCCSSSCCC------C-SCCSEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHhCC-CeEEEEeCCHHHHHHHHHhCC-----CceEEEeCChhhcCC------C-CCeEEE
Confidence 367899999999998888887764 599999999999999999876 267899999987655 4 789999
Q ss_pred EEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 110 ~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
+|..++|+ + .......+++++.++|||||+++++.++.
T Consensus 111 ~~~~~l~~-~-~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 148 (220)
T 3hnr_A 111 VSTYAFHH-L-TDDEKNVAIAKYSQLLNKGGKIVFADTIF 148 (220)
T ss_dssp EEESCGGG-S-CHHHHHHHHHHHHHHSCTTCEEEEEEECB
T ss_pred EECcchhc-C-ChHHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 99999999 4 34445669999999999999999997654
No 56
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.62 E-value=3.3e-15 Score=139.30 Aligned_cols=102 Identities=25% Similarity=0.287 Sum_probs=86.8
Q ss_pred CCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEE
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
.++.+|||||||+|..+..++. ...+|+|+|+|+.|++.|+++.. ++.|.++|+...++ +++||+|
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~~------~~~~~~~d~~~~~~-------~~~fD~v 121 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQ-SGAEVLGTDNAATMIEKARQNYP------HLHFDVADARNFRV-------DKPLDAV 121 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHCT------TSCEEECCTTTCCC-------SSCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHh-CCCeEEEEECCHHHHHHHHhhCC------CCEEEECChhhCCc-------CCCcCEE
Confidence 4678999999999988888777 55699999999999999988762 57889999977554 4789999
Q ss_pred EEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 110 ~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
+|..++|+ +. +...++++++++|||||++++.+++.
T Consensus 122 ~~~~~l~~-~~---d~~~~l~~~~~~LkpgG~l~~~~~~~ 157 (279)
T 3ccf_A 122 FSNAMLHW-VK---EPEAAIASIHQALKSGGRFVAEFGGK 157 (279)
T ss_dssp EEESCGGG-CS---CHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred EEcchhhh-Cc---CHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 99999998 43 35688999999999999999988765
No 57
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.61 E-value=1.2e-15 Score=138.49 Aligned_cols=105 Identities=23% Similarity=0.256 Sum_probs=90.3
Q ss_pred CCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEEE
Q 018352 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~ 110 (357)
++.+|||||||+|..+..++..+..+|+|+|+|+.+++.|+++.... ++.++++|+...++ ..++||+|+
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~d~~~~~~------~~~~fD~v~ 112 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPDT----GITYERADLDKLHL------PQDSFDLAY 112 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCSS----SEEEEECCGGGCCC------CTTCEEEEE
T ss_pred CCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhcccC----CceEEEcChhhccC------CCCCceEEE
Confidence 67899999999998888887776559999999999999999887543 68999999876554 467899999
Q ss_pred EccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 111 ~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
|..++|+ +. +...++++++++|+|||++++++++.
T Consensus 113 ~~~~l~~-~~---~~~~~l~~~~~~L~pgG~l~~~~~~~ 147 (243)
T 3bkw_A 113 SSLALHY-VE---DVARLFRTVHQALSPGGHFVFSTEHP 147 (243)
T ss_dssp EESCGGG-CS---CHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred Eeccccc-cc---hHHHHHHHHHHhcCcCcEEEEEeCCc
Confidence 9999998 43 46689999999999999999998875
No 58
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.61 E-value=5e-14 Score=130.46 Aligned_cols=118 Identities=14% Similarity=0.075 Sum_probs=89.4
Q ss_pred HHHHHc-CCCCCEEEEECCCCChhHHHHHHhc-C-CeEEEEeCChH------HHHHHHHHhHhcCCCceeEEEEcC-CCC
Q 018352 23 ALIKIY-SHPYVTVCDLYCGAGVDVDKWETAL-I-ANYIGIDVATS------GIGEARDTWENQRKNFIAEFFEAD-PCA 92 (357)
Q Consensus 23 ~Li~~~-~~~~~~VLDlGCG~G~~l~k~~~~~-~-~~v~GiDiS~~------~l~~A~~r~~~~~~~~~v~f~~~D-~~~ 92 (357)
.++..+ +.++.+|||||||+|..+..++... . .+|+|+|+|+. +++.|+++++..+...+++++++| ...
T Consensus 34 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 113 (275)
T 3bkx_A 34 AIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSD 113 (275)
T ss_dssp HHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTT
T ss_pred HHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhh
Confidence 344443 4678999999999999888887763 2 69999999997 999999998765544579999998 322
Q ss_pred CchhhhhhhcCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCC
Q 018352 93 ENFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 93 ~~~~~~l~~~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
..+ +..+++||+|+|..++|+ +.+.. .+++.+.++++|||++++....
T Consensus 114 ~~~----~~~~~~fD~v~~~~~l~~-~~~~~---~~~~~~~~l~~~gG~l~~~~~~ 161 (275)
T 3bkx_A 114 DLG----PIADQHFDRVVLAHSLWY-FASAN---ALALLFKNMAAVCDHVDVAEWS 161 (275)
T ss_dssp CCG----GGTTCCCSEEEEESCGGG-SSCHH---HHHHHHHHHTTTCSEEEEEEEC
T ss_pred ccC----CCCCCCEEEEEEccchhh-CCCHH---HHHHHHHHHhCCCCEEEEEEec
Confidence 222 114588999999999998 55543 4677777888889999988543
No 59
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.61 E-value=6.9e-15 Score=133.02 Aligned_cols=110 Identities=15% Similarity=0.229 Sum_probs=91.8
Q ss_pred HHHcCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCC
Q 018352 25 IKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKAN 104 (357)
Q Consensus 25 i~~~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~ 104 (357)
+..+..++.+|||+|||+|..+..++.... +++|+|+|+.|++.|+++.. ++.++++|+...++ .+
T Consensus 34 l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~~~~------~~~~~~~d~~~~~~-------~~ 99 (239)
T 3bxo_A 34 VRSRTPEASSLLDVACGTGTHLEHFTKEFG-DTAGLELSEDMLTHARKRLP------DATLHQGDMRDFRL-------GR 99 (239)
T ss_dssp HHHHCTTCCEEEEETCTTSHHHHHHHHHHS-EEEEEESCHHHHHHHHHHCT------TCEEEECCTTTCCC-------SS
T ss_pred HHHhcCCCCeEEEecccCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhCC------CCEEEECCHHHccc-------CC
Confidence 344456788999999999988888877655 99999999999999998753 47899999877543 46
Q ss_pred cccEEEEcc-chhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 105 QADLVCCFQ-HLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 105 ~FDlV~~~~-~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
+||+|+|.+ ++|| +.+.++...++++++++|+|||+++++.++.
T Consensus 100 ~~D~v~~~~~~~~~-~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 100 KFSAVVSMFSSVGY-LKTTEELGAAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp CEEEEEECTTGGGG-CCSHHHHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred CCcEEEEcCchHhh-cCCHHHHHHHHHHHHHhcCCCeEEEEEeccC
Confidence 899999765 7888 5577888999999999999999999986654
No 60
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.61 E-value=1.7e-15 Score=143.07 Aligned_cols=117 Identities=17% Similarity=0.229 Sum_probs=90.3
Q ss_pred CCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCC------------------------------
Q 018352 31 PYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRK------------------------------ 79 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~------------------------------ 79 (357)
++.+|||||||+|..+..++.. +..+|+|+|+|+.||+.|+++.+....
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 4789999999999888888776 567999999999999999987654221
Q ss_pred ---------------------------CceeEEEEcCCCCCchhhhhhhcCCcccEEEEccchhhccC---CHHHHHHHH
Q 018352 80 ---------------------------NFIAEFFEADPCAENFETQMQEKANQADLVCCFQHLQMCFE---TEERARRLL 129 (357)
Q Consensus 80 ---------------------------~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~~~~~lh~~fe---s~~~~~~~L 129 (357)
..+++|.++|+...... .+....++||+|+|..+++| +. +.+...+++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~-~~~~~~~~fD~I~~~~vl~~-ihl~~~~~~~~~~l 203 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDD-LVEAQTPEYDVVLCLSLTKW-VHLNWGDEGLKRMF 203 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHH-HHTTCCCCEEEEEEESCHHH-HHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccc-cccccCCCcCEEEEChHHHH-hhhcCCHHHHHHHH
Confidence 13799999998765411 11113589999999999877 31 455788999
Q ss_pred HHHHhcccCCcEEEEEeCCc
Q 018352 130 QNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 130 ~~i~~~LkpGG~fi~t~pd~ 149 (357)
++++++|+|||+|++...+.
T Consensus 204 ~~~~~~LkpGG~lil~~~~~ 223 (292)
T 3g07_A 204 RRIYRHLRPGGILVLEPQPW 223 (292)
T ss_dssp HHHHHHEEEEEEEEEECCCH
T ss_pred HHHHHHhCCCcEEEEecCCc
Confidence 99999999999999986553
No 61
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.61 E-value=2e-15 Score=137.74 Aligned_cols=109 Identities=12% Similarity=0.109 Sum_probs=90.5
Q ss_pred CCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEEE
Q 018352 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~ 110 (357)
++.+|||||||+|..+..++.....+|+|+|+|+.+++.|+++....+ ..++.++++|+...++ ..++||+|+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~d~~~~~~------~~~~fD~v~ 151 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEG-KRVRNYFCCGLQDFTP------EPDSYDVIW 151 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGG-GGEEEEEECCGGGCCC------CSSCEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcC-CceEEEEEcChhhcCC------CCCCEEEEE
Confidence 578999999999988877766666699999999999999999986542 2368899999876554 456899999
Q ss_pred EccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCC
Q 018352 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 111 ~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
|..++|+ + ..+....+++++.++|||||+++++.+.
T Consensus 152 ~~~~l~~-~-~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 187 (241)
T 2ex4_A 152 IQWVIGH-L-TDQHLAEFLRRCKGSLRPNGIIVIKDNM 187 (241)
T ss_dssp EESCGGG-S-CHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred Ecchhhh-C-CHHHHHHHHHHHHHhcCCCeEEEEEEcc
Confidence 9999998 4 3455678999999999999999998654
No 62
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.60 E-value=1e-14 Score=127.04 Aligned_cols=112 Identities=17% Similarity=0.184 Sum_probs=94.2
Q ss_pred HHHHHcCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhc
Q 018352 23 ALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEK 102 (357)
Q Consensus 23 ~Li~~~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~ 102 (357)
.++..+++++.+|||+|||+|..+..++..+ .+++|+|+|+.+++.|+++.. ++.++++|+...++ +
T Consensus 38 ~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~------~~~~~~~d~~~~~~------~ 104 (195)
T 3cgg_A 38 RLIDAMAPRGAKILDAGCGQGRIGGYLSKQG-HDVLGTDLDPILIDYAKQDFP------EARWVVGDLSVDQI------S 104 (195)
T ss_dssp HHHHHHSCTTCEEEEETCTTTHHHHHHHHTT-CEEEEEESCHHHHHHHHHHCT------TSEEEECCTTTSCC------C
T ss_pred HHHHHhccCCCeEEEECCCCCHHHHHHHHCC-CcEEEEcCCHHHHHHHHHhCC------CCcEEEcccccCCC------C
Confidence 5777778889999999999998888887764 599999999999999998863 47889999987554 4
Q ss_pred CCcccEEEEc-cchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 103 ANQADLVCCF-QHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 103 ~~~FDlV~~~-~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
.++||+|+|. ..+|+ + +.+....+++++.++|+|||++++..++.
T Consensus 105 ~~~~D~i~~~~~~~~~-~-~~~~~~~~l~~~~~~l~~~G~l~~~~~~~ 150 (195)
T 3cgg_A 105 ETDFDLIVSAGNVMGF-L-AEDGREPALANIHRALGADGRAVIGFGAG 150 (195)
T ss_dssp CCCEEEEEECCCCGGG-S-CHHHHHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred CCceeEEEECCcHHhh-c-ChHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 5789999998 56776 3 56778899999999999999999986653
No 63
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.59 E-value=2.9e-15 Score=136.65 Aligned_cols=113 Identities=18% Similarity=0.180 Sum_probs=90.8
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
..++.+|||+|||+|..+..++.... +|+|+|+|+.|++.|+++.... ++.|+++|+........+.. ...||+
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~~~~~a~~~~~~~----~~~~~~~d~~~~~~~~~~~~-~~~~d~ 127 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKSALEIAAKENTAA----NISYRLLDGLVPEQAAQIHS-EIGDAN 127 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHHHHHHHHHHSCCT----TEEEEECCTTCHHHHHHHHH-HHCSCE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHHHHHHHHHhCccc----CceEEECccccccccccccc-ccCccE
Confidence 45778999999999998888877766 9999999999999999987433 78999999987554322211 235999
Q ss_pred EEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
|+|..++|+ + +.++...+++++.++|||||++++..+..
T Consensus 128 v~~~~~~~~-~-~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 166 (245)
T 3ggd_A 128 IYMRTGFHH-I-PVEKRELLGQSLRILLGKQGAMYLIELGT 166 (245)
T ss_dssp EEEESSSTT-S-CGGGHHHHHHHHHHHHTTTCEEEEEEECT
T ss_pred EEEcchhhc-C-CHHHHHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 999999998 4 44567899999999999999988775443
No 64
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.59 E-value=1e-14 Score=128.98 Aligned_cols=108 Identities=14% Similarity=0.118 Sum_probs=89.5
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
++++ +|||+|||+|..+..++..+ .+|+|+|+|+.+++.|+++....+. ++.++++|+...++ .+++||+
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~------~~~~fD~ 97 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASLG-YEVTAVDQSSVGLAKAKQLAQEKGV--KITTVQSNLADFDI------VADAWEG 97 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTTT-CEEEEECSSHHHHHHHHHHHHHHTC--CEEEECCBTTTBSC------CTTTCSE
T ss_pred CCCC-CEEEECCCCCHhHHHHHhCC-CeEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcChhhcCC------CcCCccE
Confidence 4566 99999999998887776654 4999999999999999999876533 78999999987654 4578999
Q ss_pred EEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCch
Q 018352 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~ 150 (357)
|+|.+ .|+ +.++...+++++.++|+|||++++.+++..
T Consensus 98 v~~~~-~~~---~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 135 (202)
T 2kw5_A 98 IVSIF-CHL---PSSLRQQLYPKVYQGLKPGGVFILEGFAPE 135 (202)
T ss_dssp EEEEC-CCC---CHHHHHHHHHHHHTTCCSSEEEEEEEECTT
T ss_pred EEEEh-hcC---CHHHHHHHHHHHHHhcCCCcEEEEEEeccc
Confidence 99854 233 677889999999999999999999987753
No 65
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.59 E-value=4.4e-15 Score=132.41 Aligned_cols=103 Identities=18% Similarity=0.133 Sum_probs=87.0
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
++++.+|||+|||+|..+..++..+ .+|+|+|+|+.+++.|+++. ++.+..+|+...+ .+++||+
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~-------~~~~~~~d~~~~~-------~~~~fD~ 105 (211)
T 3e23_A 41 LPAGAKILELGCGAGYQAEAMLAAG-FDVDATDGSPELAAEASRRL-------GRPVRTMLFHQLD-------AIDAYDA 105 (211)
T ss_dssp SCTTCEEEESSCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHH-------TSCCEECCGGGCC-------CCSCEEE
T ss_pred cCCCCcEEEECCCCCHHHHHHHHcC-CeEEEECCCHHHHHHHHHhc-------CCceEEeeeccCC-------CCCcEEE
Confidence 4578899999999998888887764 49999999999999999887 3456788876543 2589999
Q ss_pred EEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCC
Q 018352 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
|+|..++|+ + ..++...+++++.++|||||+++++++.
T Consensus 106 v~~~~~l~~-~-~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 143 (211)
T 3e23_A 106 VWAHACLLH-V-PRDELADVLKLIWRALKPGGLFYASYKS 143 (211)
T ss_dssp EEECSCGGG-S-CHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEecCchhh-c-CHHHHHHHHHHHHHhcCCCcEEEEEEcC
Confidence 999999999 4 4677889999999999999999998655
No 66
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.59 E-value=1.9e-14 Score=132.89 Aligned_cols=114 Identities=16% Similarity=0.160 Sum_probs=90.9
Q ss_pred HHHHHcCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhc
Q 018352 23 ALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEK 102 (357)
Q Consensus 23 ~Li~~~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~ 102 (357)
.++..+++++.+|||||||+|..+..++..+ .+++|+|+|+.|++.|+++... .++++|+...++ .
T Consensus 46 ~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~l~~a~~~~~~-------~~~~~d~~~~~~------~ 111 (260)
T 2avn_A 46 SFLEEYLKNPCRVLDLGGGTGKWSLFLQERG-FEVVLVDPSKEMLEVAREKGVK-------NVVEAKAEDLPF------P 111 (260)
T ss_dssp HHHHHHCCSCCEEEEETCTTCHHHHHHHTTT-CEEEEEESCHHHHHHHHHHTCS-------CEEECCTTSCCS------C
T ss_pred HHHHHhcCCCCeEEEeCCCcCHHHHHHHHcC-CeEEEEeCCHHHHHHHHhhcCC-------CEEECcHHHCCC------C
Confidence 3445555678899999999998888776664 5899999999999999988641 278999877665 4
Q ss_pred CCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCchHHH
Q 018352 103 ANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIW 153 (357)
Q Consensus 103 ~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~i~ 153 (357)
+++||+|+|...+++...+ ...+++++.++|||||++++++++....+
T Consensus 112 ~~~fD~v~~~~~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~ 159 (260)
T 2avn_A 112 SGAFEAVLALGDVLSYVEN---KDKAFSEIRRVLVPDGLLIATVDNFYTFL 159 (260)
T ss_dssp TTCEEEEEECSSHHHHCSC---HHHHHHHHHHHEEEEEEEEEEEEBHHHHH
T ss_pred CCCEEEEEEcchhhhcccc---HHHHHHHHHHHcCCCeEEEEEeCChHHHH
Confidence 6889999998765542333 77899999999999999999999875443
No 67
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.58 E-value=6.1e-15 Score=135.42 Aligned_cols=115 Identities=17% Similarity=0.117 Sum_probs=90.2
Q ss_pred CCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCC----------------------------c
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKN----------------------------F 81 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~----------------------------~ 81 (357)
.++.+|||+|||+|..+..++..+..+|+|+|+|+.|++.|+++.+..... .
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 356799999999998777665555458999999999999999987653210 0
Q ss_pred ee-EEEEcCCCCCchhhhhhhcCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEe
Q 018352 82 IA-EFFEADPCAENFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 82 ~v-~f~~~D~~~~~~~~~l~~~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~ 146 (357)
++ .++++|+........ ...++||+|+|.+++|++..+.++...++++++++|||||+|++..
T Consensus 135 ~v~~~~~~d~~~~~~~~~--~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 198 (265)
T 2i62_A 135 AIKQVLKCDVTQSQPLGG--VSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVD 198 (265)
T ss_dssp HEEEEEECCTTSSSTTTT--CCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hheeEEEeeeccCCCCCc--cccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEe
Confidence 27 899999977533110 0127899999999999766567789999999999999999999886
No 68
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.58 E-value=1.3e-14 Score=133.14 Aligned_cols=107 Identities=17% Similarity=0.133 Sum_probs=88.9
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
..++.+|||+|||+|..+..++.. ..+|+|+|+|+.|++.|+++... ...++.|+++|+...++ .+++||+
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~--~~~~~~~~~~d~~~~~~------~~~~fD~ 107 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIAR-GYRYIALDADAAMLEVFRQKIAG--VDRKVQVVQADARAIPL------PDESVHG 107 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTT-TCEEEEEESCHHHHHHHHHHTTT--SCTTEEEEESCTTSCCS------CTTCEEE
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhhc--cCCceEEEEcccccCCC------CCCCeeE
Confidence 457789999999999888887766 45999999999999999998722 12378999999977665 4678999
Q ss_pred EEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCC
Q 018352 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
|+|..++|+ +. +...+++++.++|||||++++..++
T Consensus 108 v~~~~~l~~-~~---~~~~~l~~~~~~L~pgG~l~~~~~~ 143 (263)
T 2yqz_A 108 VIVVHLWHL-VP---DWPKVLAEAIRVLKPGGALLEGWDQ 143 (263)
T ss_dssp EEEESCGGG-CT---THHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EEECCchhh-cC---CHHHHHHHHHHHCCCCcEEEEEecC
Confidence 999999999 53 4668899999999999999987433
No 69
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.58 E-value=9.7e-15 Score=131.35 Aligned_cols=148 Identities=16% Similarity=0.190 Sum_probs=109.1
Q ss_pred HHHHcCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcC
Q 018352 24 LIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKA 103 (357)
Q Consensus 24 Li~~~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~ 103 (357)
++..+.+ +.+|||+|||+|..+..+... +|+|+|+.+++.|+++ ++.++++|+...++ ..
T Consensus 41 ~l~~~~~-~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~--------~~~~~~~d~~~~~~------~~ 100 (219)
T 1vlm_A 41 AVKCLLP-EGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR--------GVFVLKGTAENLPL------KD 100 (219)
T ss_dssp HHHHHCC-SSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT--------TCEEEECBTTBCCS------CT
T ss_pred HHHHhCC-CCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc--------CCEEEEcccccCCC------CC
Confidence 3445554 889999999999887766432 9999999999999876 46789999877554 45
Q ss_pred CcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCchHHHHHHHHhHHhhhcCCCCCCCCCCCCccCCcc
Q 018352 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKYQKNVEAYHNRSSSMKPNLVPNCIRSES 183 (357)
Q Consensus 104 ~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~i~~~~~~~~~~~~~~~~~~~~~~fgn~i~~~~ 183 (357)
++||+|+|..++|+ +. +...+++++.++|+|||+++++.++....+....... . .+.
T Consensus 101 ~~fD~v~~~~~l~~-~~---~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~-----~--------~~~------ 157 (219)
T 1vlm_A 101 ESFDFALMVTTICF-VD---DPERALKEAYRILKKGGYLIVGIVDRESFLGREYEKN-----K--------EKS------ 157 (219)
T ss_dssp TCEEEEEEESCGGG-SS---CHHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHT-----T--------TC-------
T ss_pred CCeeEEEEcchHhh-cc---CHHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHH-----h--------cCc------
Confidence 78999999999998 43 3568999999999999999999887755544332110 0 000
Q ss_pred EEEEeecccCCCCccceeeEeEEcCCcccCcccccchHHHHHHHHHcCCEEEEecCc
Q 018352 184 YVITFEVEEEKFPLFGKKYQLKFANDISAETQCLVHFPSLIRLAREAGLEYVEIQNL 240 (357)
Q Consensus 184 y~i~f~~~~~~~p~fG~~Y~f~L~~~~~~~~eylv~~~~l~~la~e~Glelv~~~~f 240 (357)
+.++ .....+.+.+.++++++||+.+.....
T Consensus 158 ------------~~~~--------------~~~~~~~~~l~~~l~~~Gf~~~~~~~~ 188 (219)
T 1vlm_A 158 ------------VFYK--------------NARFFSTEELMDLMRKAGFEEFKVVQT 188 (219)
T ss_dssp ------------CCST--------------TCCCCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred ------------chhc--------------ccccCCHHHHHHHHHHCCCeEEEEecc
Confidence 0000 013457888999999999999886644
No 70
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.58 E-value=9.3e-15 Score=136.64 Aligned_cols=104 Identities=20% Similarity=0.202 Sum_probs=89.5
Q ss_pred CCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEEE
Q 018352 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~ 110 (357)
++.+|||+|||+|..+..++..+. +|+|+|+|+.+++.|+++....+. ++.++++|+....+ .++||+|+
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~-~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~-------~~~fD~i~ 189 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGY-DVTSWDHNENSIAFLNETKEKENL--NISTALYDINAANI-------QENYDFIV 189 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCGGGCCC-------CSCEEEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHHcCC--ceEEEEeccccccc-------cCCccEEE
Confidence 678999999999998888877755 999999999999999999887654 78999999876443 47899999
Q ss_pred EccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEe
Q 018352 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 111 ~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~ 146 (357)
|..++|+ + +.+....+++++.++|+|||++++..
T Consensus 190 ~~~~~~~-~-~~~~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 190 STVVFMF-L-NRERVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp ECSSGGG-S-CGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred Eccchhh-C-CHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 9999998 4 45667889999999999999977663
No 71
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.57 E-value=1.1e-14 Score=127.82 Aligned_cols=105 Identities=19% Similarity=0.159 Sum_probs=87.7
Q ss_pred CCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEEE
Q 018352 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~ 110 (357)
++.+|||+|||+|..+..++..+ .+++|+|+|+.+++.|+++.+..+.. ++.++++|+...++ .++||+|+
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~-------~~~~D~v~ 102 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAANG-YDVDAWDKNAMSIANVERIKSIENLD-NLHTRVVDLNNLTF-------DRQYDFIL 102 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECCGGGCCC-------CCCEEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHHCC-CeEEEEECCHHHHHHHHHHHHhCCCC-CcEEEEcchhhCCC-------CCCceEEE
Confidence 56799999999998888887764 49999999999999999988765432 58999999876443 47899999
Q ss_pred EccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEe
Q 018352 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 111 ~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~ 146 (357)
|..++|+ + +.++...+++++.++|||||++++..
T Consensus 103 ~~~~l~~-~-~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 103 STVVLMF-L-EAKTIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp EESCGGG-S-CGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred Ecchhhh-C-CHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 9999998 4 34567889999999999999987763
No 72
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.57 E-value=4.4e-15 Score=136.00 Aligned_cols=116 Identities=16% Similarity=-0.017 Sum_probs=87.3
Q ss_pred HHHHcCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcC
Q 018352 24 LIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKA 103 (357)
Q Consensus 24 Li~~~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~ 103 (357)
+......++.+|||||||+|..+..+++....+++|||+|+.+++.|+++.+... .++.++.+|+..... . .++
T Consensus 53 ~a~~~~~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~--~~~~~~~~~a~~~~~--~--~~~ 126 (236)
T 3orh_A 53 LAAAASSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAP--T--LPD 126 (236)
T ss_dssp HHHHHTTTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGG--G--SCT
T ss_pred HHHhhccCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCC--CceEEEeehHHhhcc--c--ccc
Confidence 3344456889999999999988877766666789999999999999999987653 367888888643211 1 146
Q ss_pred CcccEEEEccc-hhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 104 NQADLVCCFQH-LQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 104 ~~FDlV~~~~~-lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
++||.|++.-. ..+...+..+...++++++|+|||||+|++.
T Consensus 127 ~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 127 GHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp TCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred cCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 88999975321 2222345667889999999999999999875
No 73
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.57 E-value=1.4e-14 Score=134.34 Aligned_cols=109 Identities=22% Similarity=0.327 Sum_probs=92.1
Q ss_pred CCCCEEEEECCCCChhHHHHHHhc-CCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~-~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
.++.+|||||||+|..+..++... ..+++|+|+|+.+++.|+++....+.. ++.|+.+|+...++ .+++||+
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~------~~~~fD~ 108 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIK-NVKFLQANIFSLPF------EDSSFDH 108 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGGGCCS------CTTCEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEcccccCCC------CCCCeeE
Confidence 578899999999998888887763 569999999999999999998765432 68999999987665 4689999
Q ss_pred EEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
|+|..++|+ +.+ ...+++++.++|||||+++++.++.
T Consensus 109 v~~~~~l~~-~~~---~~~~l~~~~~~L~pgG~l~~~~~~~ 145 (276)
T 3mgg_A 109 IFVCFVLEH-LQS---PEEALKSLKKVLKPGGTITVIEGDH 145 (276)
T ss_dssp EEEESCGGG-CSC---HHHHHHHHHHHEEEEEEEEEEEECG
T ss_pred EEEechhhh-cCC---HHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 999999998 434 4578999999999999999987653
No 74
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.57 E-value=4.4e-14 Score=122.95 Aligned_cols=111 Identities=15% Similarity=0.151 Sum_probs=92.2
Q ss_pred CCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCc-eeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNF-IAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~-~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
.++.+|||+|||+|..+..++.. ..+++|+|+|+.+++.|+++....+... ++.++++|+... + ..++||+
T Consensus 51 ~~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-~------~~~~~D~ 122 (194)
T 1dus_A 51 DKDDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN-V------KDRKYNK 122 (194)
T ss_dssp CTTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT-C------TTSCEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcc-c------ccCCceE
Confidence 36789999999999888877766 6699999999999999999987654332 389999998762 2 2478999
Q ss_pred EEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCchH
Q 018352 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSST 151 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~ 151 (357)
|++...+|+ ..+....+++++.++|+|||++++.+++...
T Consensus 123 v~~~~~~~~---~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 162 (194)
T 1dus_A 123 IITNPPIRA---GKEVLHRIIEEGKELLKDNGEIWVVIQTKQG 162 (194)
T ss_dssp EEECCCSTT---CHHHHHHHHHHHHHHEEEEEEEEEEEESTHH
T ss_pred EEECCCccc---chhHHHHHHHHHHHHcCCCCEEEEEECCCCC
Confidence 999887776 4567889999999999999999999888643
No 75
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.57 E-value=4.2e-14 Score=122.04 Aligned_cols=116 Identities=12% Similarity=0.106 Sum_probs=89.2
Q ss_pred HHHHHHc-CCCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhh
Q 018352 22 TALIKIY-SHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQM 99 (357)
Q Consensus 22 s~Li~~~-~~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l 99 (357)
..++... ..++.+|||+|||+|..+..++.. +..+|+|+|+|+.+++.|+++.+..+...++ ++++|... .+
T Consensus 15 ~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~-~~---- 88 (178)
T 3hm2_A 15 ALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPR-AF---- 88 (178)
T ss_dssp HHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTG-GG----
T ss_pred HHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHh-hh----
Confidence 3344443 346789999999999888877666 3579999999999999999998776554467 88888754 33
Q ss_pred hhcCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCchH
Q 018352 100 QEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSST 151 (357)
Q Consensus 100 ~~~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~ 151 (357)
+...++||+|++..++|+ ..+++++.++|+|||++++..+..+.
T Consensus 89 ~~~~~~~D~i~~~~~~~~--------~~~l~~~~~~L~~gG~l~~~~~~~~~ 132 (178)
T 3hm2_A 89 DDVPDNPDVIFIGGGLTA--------PGVFAAAWKRLPVGGRLVANAVTVES 132 (178)
T ss_dssp GGCCSCCSEEEECC-TTC--------TTHHHHHHHTCCTTCEEEEEECSHHH
T ss_pred hccCCCCCEEEECCcccH--------HHHHHHHHHhcCCCCEEEEEeecccc
Confidence 112378999999987765 46899999999999999998776543
No 76
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.57 E-value=4.5e-14 Score=127.51 Aligned_cols=118 Identities=15% Similarity=0.094 Sum_probs=92.3
Q ss_pred HHHcCCCCCEEEEECCC-CChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCC-chhhhhhhc
Q 018352 25 IKIYSHPYVTVCDLYCG-AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAE-NFETQMQEK 102 (357)
Q Consensus 25 i~~~~~~~~~VLDlGCG-~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~-~~~~~l~~~ 102 (357)
+...+.++.+|||+||| +|..+..++.....+|+|+|+|+.+++.|+++.+..+. +++++++|+... .+ .
T Consensus 49 ~~~~~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~------~ 120 (230)
T 3evz_A 49 LKTFLRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNS--NVRLVKSNGGIIKGV------V 120 (230)
T ss_dssp HHTTCCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTC--CCEEEECSSCSSTTT------C
T ss_pred hHhhcCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCC--CcEEEeCCchhhhhc------c
Confidence 55666788999999999 99888877776456999999999999999999887654 789999997432 22 3
Q ss_pred CCcccEEEEccchhhccC---------------CHHHHHHHHHHHHhcccCCcEEEEEeCCch
Q 018352 103 ANQADLVCCFQHLQMCFE---------------TEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (357)
Q Consensus 103 ~~~FDlV~~~~~lh~~fe---------------s~~~~~~~L~~i~~~LkpGG~fi~t~pd~~ 150 (357)
+++||+|+|+..++..-. ..+....+++++.++|||||++++.++...
T Consensus 121 ~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 183 (230)
T 3evz_A 121 EGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE 183 (230)
T ss_dssp CSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH
T ss_pred cCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH
Confidence 478999999876554110 112247899999999999999999888764
No 77
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.56 E-value=5.9e-15 Score=131.88 Aligned_cols=104 Identities=23% Similarity=0.234 Sum_probs=81.2
Q ss_pred CCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEEE
Q 018352 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~ 110 (357)
++.+|||+|||+|..+..++..+ .+|+|+|+|+.+++.|+++ . ++.+..+|+..... .......+||+|+
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~---~----~~~~~~~~~~~~~~--~~~~~~~~fD~v~ 121 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALADRG-IEAVGVDGDRTLVDAARAA---G----AGEVHLASYAQLAE--AKVPVGKDYDLIC 121 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHTTT-CEEEEEESCHHHHHHHHHT---C----SSCEEECCHHHHHT--TCSCCCCCEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHCC-CEEEEEcCCHHHHHHHHHh---c----ccccchhhHHhhcc--cccccCCCccEEE
Confidence 56899999999998887776664 4999999999999999887 1 45677777644210 0001245699999
Q ss_pred EccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 111 ~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
|..++|. .+...++++++++|||||++++++++.
T Consensus 122 ~~~~l~~-----~~~~~~l~~~~~~L~pgG~l~~~~~~~ 155 (227)
T 3e8s_A 122 ANFALLH-----QDIIELLSAMRTLLVPGGALVIQTLHP 155 (227)
T ss_dssp EESCCCS-----SCCHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred ECchhhh-----hhHHHHHHHHHHHhCCCeEEEEEecCc
Confidence 9998882 235678999999999999999998876
No 78
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.56 E-value=1.7e-14 Score=135.18 Aligned_cols=106 Identities=24% Similarity=0.340 Sum_probs=90.4
Q ss_pred CCCCEEEEECCCCChhHHHHHHh-c-CCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCccc
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETA-L-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~-~-~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FD 107 (357)
.++.+|||||||+|..+..++.. + ..+|+|+|+|+.+++.|+++...... ++.|+++|+...++ +++||
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~-------~~~fD 91 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY--DSEFLEGDATEIEL-------NDKYD 91 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS--EEEEEESCTTTCCC-------SSCEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcchhhcCc-------CCCee
Confidence 46789999999999888777665 2 46999999999999999999876533 79999999987554 36899
Q ss_pred EEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCC
Q 018352 108 LVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 108 lV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
+|+|..++|+ +. +...+++++.++|||||++++..|+
T Consensus 92 ~v~~~~~l~~-~~---~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 92 IAICHAFLLH-MT---TPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp EEEEESCGGG-CS---SHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEEECChhhc-CC---CHHHHHHHHHHHcCCCCEEEEEecc
Confidence 9999999998 43 3468999999999999999999988
No 79
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.55 E-value=3.9e-14 Score=132.19 Aligned_cols=109 Identities=17% Similarity=0.092 Sum_probs=82.4
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
..++.+|||||||+|..+..++..+ .+|+|+|+|+.|++.|+++.... .....+...+...... ..++||+
T Consensus 43 l~~g~~VLDlGcGtG~~a~~La~~g-~~V~gvD~S~~ml~~Ar~~~~~~--~v~~~~~~~~~~~~~~------~~~~fD~ 113 (261)
T 3iv6_A 43 IVPGSTVAVIGASTRFLIEKALERG-ASVTVFDFSQRMCDDLAEALADR--CVTIDLLDITAEIPKE------LAGHFDF 113 (261)
T ss_dssp CCTTCEEEEECTTCHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHTSSS--CCEEEECCTTSCCCGG------GTTCCSE
T ss_pred CCCcCEEEEEeCcchHHHHHHHhcC-CEEEEEECCHHHHHHHHHHHHhc--cceeeeeecccccccc------cCCCccE
Confidence 4578899999999998888777665 59999999999999999987654 1122232222200011 2478999
Q ss_pred EEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
|+|..++|+ + ..++.+.+++++.++| |||+++++.+..
T Consensus 114 Vv~~~~l~~-~-~~~~~~~~l~~l~~lL-PGG~l~lS~~~g 151 (261)
T 3iv6_A 114 VLNDRLINR-F-TTEEARRACLGMLSLV-GSGTVRASVKLG 151 (261)
T ss_dssp EEEESCGGG-S-CHHHHHHHHHHHHHHH-TTSEEEEEEEBS
T ss_pred EEEhhhhHh-C-CHHHHHHHHHHHHHhC-cCcEEEEEeccC
Confidence 999999998 5 4667889999999999 999999886543
No 80
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.55 E-value=2.3e-14 Score=127.27 Aligned_cols=106 Identities=14% Similarity=0.077 Sum_probs=88.2
Q ss_pred HcCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcc
Q 018352 27 IYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (357)
Q Consensus 27 ~~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~F 106 (357)
.+..++.+|||+|||+|..+..+++.+..+|+|+|+|+.+++.|+++.+..+.. ++++.++|+... ..++|
T Consensus 56 ~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~--------~~~~f 126 (205)
T 3grz_A 56 RAMVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIY-DIALQKTSLLAD--------VDGKF 126 (205)
T ss_dssp HHCSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC-CCEEEESSTTTT--------CCSCE
T ss_pred HhccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEecccccc--------CCCCc
Confidence 445678999999999998888877766779999999999999999998766443 389999998652 24789
Q ss_pred cEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCC
Q 018352 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 107 DlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
|+|++...+|+ ...+++++.++|+|||++++..+.
T Consensus 127 D~i~~~~~~~~-------~~~~l~~~~~~L~~gG~l~~~~~~ 161 (205)
T 3grz_A 127 DLIVANILAEI-------LLDLIPQLDSHLNEDGQVIFSGID 161 (205)
T ss_dssp EEEEEESCHHH-------HHHHGGGSGGGEEEEEEEEEEEEE
T ss_pred eEEEECCcHHH-------HHHHHHHHHHhcCCCCEEEEEecC
Confidence 99999887665 468899999999999999987433
No 81
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.55 E-value=4.5e-14 Score=130.66 Aligned_cols=125 Identities=19% Similarity=0.159 Sum_probs=94.3
Q ss_pred HHHHHHHcCC---CCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhh
Q 018352 21 KTALIKIYSH---PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET 97 (357)
Q Consensus 21 ks~Li~~~~~---~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~ 97 (357)
.+.++..++. ++.+|||+|||+|..+..++.....+|+|+|+++.+++.|+++.+.++...++.++++|+.....
T Consensus 36 d~~ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~-- 113 (259)
T 3lpm_A 36 DAVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITD-- 113 (259)
T ss_dssp HHHHHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGG--
T ss_pred HHHHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhh--
Confidence 3566666654 67899999999998888877766569999999999999999999877665579999999866331
Q ss_pred hhhhcCCcccEEEEccchhhc----------------cCCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 98 QMQEKANQADLVCCFQHLQMC----------------FETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 98 ~l~~~~~~FDlV~~~~~lh~~----------------fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
.+ ..++||+|+|+..++.. ++.......+++.+.++|||||+|++..+..
T Consensus 114 ~~--~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 179 (259)
T 3lpm_A 114 LI--PKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPE 179 (259)
T ss_dssp TS--CTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTT
T ss_pred hh--ccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHH
Confidence 11 25789999997543321 1112446789999999999999999986543
No 82
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.55 E-value=1.4e-14 Score=141.95 Aligned_cols=110 Identities=20% Similarity=0.176 Sum_probs=90.1
Q ss_pred CCCCEEEEECCCCChhHHHHHHh--cCCeEEEEeCChHHHHHHHHHhHhc-----C--CCceeEEEEcCCCCC------c
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQ-----R--KNFIAEFFEADPCAE------N 94 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~--~~~~v~GiDiS~~~l~~A~~r~~~~-----~--~~~~v~f~~~D~~~~------~ 94 (357)
.++.+|||||||+|..+..++.. +..+|+|+|+|+.+++.|+++.+.. + ...++.|+++|+... +
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 46789999999999888888775 4569999999999999999987543 1 113799999999875 3
Q ss_pred hhhhhhhcCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 95 FETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 95 ~~~~l~~~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
+ ++++||+|++..++|+ +. +...+++++.++|||||+|++..+..
T Consensus 162 ~------~~~~fD~V~~~~~l~~-~~---d~~~~l~~~~r~LkpgG~l~i~~~~~ 206 (383)
T 4fsd_A 162 V------PDSSVDIVISNCVCNL-ST---NKLALFKEIHRVLRDGGELYFSDVYA 206 (383)
T ss_dssp C------CTTCEEEEEEESCGGG-CS---CHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred C------CCCCEEEEEEccchhc-CC---CHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 3 4689999999999998 43 35789999999999999999885443
No 83
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.54 E-value=2e-14 Score=135.23 Aligned_cols=114 Identities=15% Similarity=0.130 Sum_probs=78.4
Q ss_pred CCCEEEEECCCCChhHH----HHHHh-cCCe--EEEEeCChHHHHHHHHHhHhcCCCceeEE--EEcCCCCCchhhhh--
Q 018352 31 PYVTVCDLYCGAGVDVD----KWETA-LIAN--YIGIDVATSGIGEARDTWENQRKNFIAEF--FEADPCAENFETQM-- 99 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~----k~~~~-~~~~--v~GiDiS~~~l~~A~~r~~~~~~~~~v~f--~~~D~~~~~~~~~l-- 99 (357)
++.+|||||||+|..+. .+... +... ++|+|+|++|++.|+++........++.| ..+++. ++...+
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~~~ 129 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSS--EYQSRMLE 129 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHH--HHHHHHHT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchh--hhhhhhcc
Confidence 56799999999996443 22222 2343 49999999999999999864311123444 444432 221100
Q ss_pred hhcCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCch
Q 018352 100 QEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (357)
Q Consensus 100 ~~~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~ 150 (357)
...+++||+|+|.+++|| +.+ ..++|++++++|||||+|++..++.+
T Consensus 130 ~~~~~~fD~V~~~~~l~~-~~d---~~~~l~~~~r~LkpgG~l~i~~~~~~ 176 (292)
T 2aot_A 130 KKELQKWDFIHMIQMLYY-VKD---IPATLKFFHSLLGTNAKMLIIVVSGS 176 (292)
T ss_dssp TTCCCCEEEEEEESCGGG-CSC---HHHHHHHHHHTEEEEEEEEEEEECTT
T ss_pred ccCCCceeEEEEeeeeee-cCC---HHHHHHHHHHHcCCCcEEEEEEecCC
Confidence 013578999999999999 543 56789999999999999998865543
No 84
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.54 E-value=2.3e-13 Score=120.84 Aligned_cols=115 Identities=11% Similarity=0.002 Sum_probs=91.4
Q ss_pred HHHHHHc-CCCCCEEEEECCCCChhHHHHHHhc-CCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhh
Q 018352 22 TALIKIY-SHPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQM 99 (357)
Q Consensus 22 s~Li~~~-~~~~~~VLDlGCG~G~~l~k~~~~~-~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l 99 (357)
..++... ..++.+|||+|||+|..+..++... ..+|+|+|+|+.+++.|+++.+..+. .+++++++|+.....
T Consensus 30 ~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~---- 104 (204)
T 3e05_A 30 AVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVA-RNVTLVEAFAPEGLD---- 104 (204)
T ss_dssp HHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTC-TTEEEEECCTTTTCT----
T ss_pred HHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeCChhhhhh----
Confidence 3344443 3478899999999999888887774 57999999999999999999876544 368999999865322
Q ss_pred hhcCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCch
Q 018352 100 QEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (357)
Q Consensus 100 ~~~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~ 150 (357)
...+||+|++..+++ ....+++++.++|||||++++..+..+
T Consensus 105 --~~~~~D~i~~~~~~~-------~~~~~l~~~~~~LkpgG~l~~~~~~~~ 146 (204)
T 3e05_A 105 --DLPDPDRVFIGGSGG-------MLEEIIDAVDRRLKSEGVIVLNAVTLD 146 (204)
T ss_dssp --TSCCCSEEEESCCTT-------CHHHHHHHHHHHCCTTCEEEEEECBHH
T ss_pred --cCCCCCEEEECCCCc-------CHHHHHHHHHHhcCCCeEEEEEecccc
Confidence 236799999988654 366889999999999999999977653
No 85
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.54 E-value=2e-14 Score=139.35 Aligned_cols=106 Identities=15% Similarity=0.113 Sum_probs=88.8
Q ss_pred CCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEE
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
.++.+|||||||+|..+..+++.+..+|+|+|+| +|++.|+++.+.++...+++|+++|+...++ +.++||+|
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~------~~~~fD~I 137 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKAGARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVEL------PVEKVDII 137 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCCC------SSSCEEEE
T ss_pred CCCCEEEEEeccchHHHHHHHHCCCCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHccC------CCCceEEE
Confidence 3678999999999998888888877799999999 5999999999877665569999999988765 46899999
Q ss_pred EEccchhhccCCHHHHHHHHHHHHhcccCCcEEE
Q 018352 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFL 143 (357)
Q Consensus 110 ~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi 143 (357)
+|....++ +........+++.+.++|||||+++
T Consensus 138 is~~~~~~-l~~~~~~~~~l~~~~r~LkpgG~li 170 (349)
T 3q7e_A 138 ISEWMGYC-LFYESMLNTVLHARDKWLAPDGLIF 170 (349)
T ss_dssp EECCCBBT-BTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred EEcccccc-ccCchhHHHHHHHHHHhCCCCCEEc
Confidence 99765443 3345567789999999999999986
No 86
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.53 E-value=3.1e-14 Score=123.43 Aligned_cols=111 Identities=12% Similarity=0.039 Sum_probs=86.6
Q ss_pred CCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEE
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
.++.+|||+|||+|..+..++..+..+|+|+|+|+.+++.|+++.+..+...+++++++|+... +....++||+|
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~~fD~i 104 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERA-----IDCLTGRFDLV 104 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHH-----HHHBCSCEEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHh-----HHhhcCCCCEE
Confidence 4678999999999998888877766799999999999999999987765444689999987541 11134679999
Q ss_pred EEccchhhccCCHHHHHHHHHHHH--hcccCCcEEEEEeCCch
Q 018352 110 CCFQHLQMCFETEERARRLLQNVS--SLLKPGGYFLGITPDSS 150 (357)
Q Consensus 110 ~~~~~lh~~fes~~~~~~~L~~i~--~~LkpGG~fi~t~pd~~ 150 (357)
++...++. .....+++.+. ++|+|||++++.++...
T Consensus 105 ~~~~~~~~-----~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 105 FLDPPYAK-----ETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp EECCSSHH-----HHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred EECCCCCc-----chHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 99876543 23455666666 99999999999876653
No 87
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.53 E-value=1.6e-13 Score=122.75 Aligned_cols=108 Identities=13% Similarity=0.031 Sum_probs=87.4
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
..++.+|||+|||+|..+..++.. ..+|+|+|+|+.+++.|+++.+..+...+++++++|+..... ....||+
T Consensus 53 ~~~~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~------~~~~~D~ 125 (204)
T 3njr_A 53 PRRGELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALA------DLPLPEA 125 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGT------TSCCCSE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcc------cCCCCCE
Confidence 357889999999999888888777 669999999999999999998776554469999999865211 2357999
Q ss_pred EEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCchHH
Q 018352 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTI 152 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~i 152 (357)
|++..++ ... +++++.++|||||++++.+++.+.+
T Consensus 126 v~~~~~~--------~~~-~l~~~~~~LkpgG~lv~~~~~~~~~ 160 (204)
T 3njr_A 126 VFIGGGG--------SQA-LYDRLWEWLAPGTRIVANAVTLESE 160 (204)
T ss_dssp EEECSCC--------CHH-HHHHHHHHSCTTCEEEEEECSHHHH
T ss_pred EEECCcc--------cHH-HHHHHHHhcCCCcEEEEEecCcccH
Confidence 9987633 134 8999999999999999998876544
No 88
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.53 E-value=2.5e-14 Score=131.08 Aligned_cols=109 Identities=23% Similarity=0.266 Sum_probs=89.2
Q ss_pred HHHHc-CCCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh
Q 018352 24 LIKIY-SHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE 101 (357)
Q Consensus 24 Li~~~-~~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~ 101 (357)
++..+ ..++.+|||+|||+|..+..++.. +..+|+|+|+|+.|++.|+++.. ++.|+++|+...+
T Consensus 25 l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~------~~~~~~~d~~~~~------- 91 (259)
T 2p35_A 25 LLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLP------NTNFGKADLATWK------- 91 (259)
T ss_dssp HHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHST------TSEEEECCTTTCC-------
T ss_pred HHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCC------CcEEEECChhhcC-------
Confidence 44443 246789999999999888877766 35699999999999999988831 5789999987643
Q ss_pred cCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 102 KANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 102 ~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
.+++||+|+|..++|+ +. +...+++++.++|||||++++++++.
T Consensus 92 ~~~~fD~v~~~~~l~~-~~---~~~~~l~~~~~~L~pgG~l~~~~~~~ 135 (259)
T 2p35_A 92 PAQKADLLYANAVFQW-VP---DHLAVLSQLMDQLESGGVLAVQMPDN 135 (259)
T ss_dssp CSSCEEEEEEESCGGG-ST---THHHHHHHHGGGEEEEEEEEEEEECC
T ss_pred ccCCcCEEEEeCchhh-CC---CHHHHHHHHHHhcCCCeEEEEEeCCC
Confidence 2478999999999999 43 46789999999999999999998764
No 89
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.53 E-value=1e-13 Score=124.26 Aligned_cols=116 Identities=16% Similarity=0.082 Sum_probs=89.2
Q ss_pred CCCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCccc
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FD 107 (357)
..++.+|||||||+|..+..++.. +..+++|+|+|+.+++.|+++....+. .++.++++|+.... ..+ ..++||
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~--~~~--~~~~~D 113 (214)
T 1yzh_A 39 GNDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGV-PNIKLLWVDGSDLT--DYF--EDGEID 113 (214)
T ss_dssp TSCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-SSEEEEECCSSCGG--GTS--CTTCCS
T ss_pred CCCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCC-CCEEEEeCCHHHHH--hhc--CCCCCC
Confidence 345789999999999888888776 356999999999999999999876644 37999999997633 111 357899
Q ss_pred EEEEccchhhccCCHH-----HHHHHHHHHHhcccCCcEEEEEeCCch
Q 018352 108 LVCCFQHLQMCFETEE-----RARRLLQNVSSLLKPGGYFLGITPDSS 150 (357)
Q Consensus 108 lV~~~~~lh~~fes~~-----~~~~~L~~i~~~LkpGG~fi~t~pd~~ 150 (357)
+|++.+..++ ..... ....+++++.++|+|||++++.+.+..
T Consensus 114 ~i~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 160 (214)
T 1yzh_A 114 RLYLNFSDPW-PKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRG 160 (214)
T ss_dssp EEEEESCCCC-CSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHH
T ss_pred EEEEECCCCc-cccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHH
Confidence 9999886544 11000 125789999999999999999887643
No 90
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.53 E-value=1.7e-14 Score=133.45 Aligned_cols=101 Identities=13% Similarity=0.080 Sum_probs=84.8
Q ss_pred CCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEE
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
.++.+|||||||+|..+..++. ...+|+|+|+|+.|++.|+++. ++.|+++|+...++ ++++||+|
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~-------~~~~~~~d~~~~~~------~~~~fD~v 98 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALAN-QGLFVYAVEPSIVMRQQAVVHP-------QVEWFTGYAENLAL------PDKSVDGV 98 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHT-TTCEEEEECSCHHHHHSSCCCT-------TEEEECCCTTSCCS------CTTCBSEE
T ss_pred CCCCEEEEEcCcccHHHHHHHh-CCCEEEEEeCCHHHHHHHHhcc-------CCEEEECchhhCCC------CCCCEeEE
Confidence 5788999999999988877766 4569999999999998776543 68999999987665 56899999
Q ss_pred EEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 110 ~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
+|..++|+ + .+...+++++.++|| ||++++..++.
T Consensus 99 ~~~~~l~~-~---~~~~~~l~~~~~~Lk-gG~~~~~~~~~ 133 (261)
T 3ege_A 99 ISILAIHH-F---SHLEKSFQEMQRIIR-DGTIVLLTFDI 133 (261)
T ss_dssp EEESCGGG-C---SSHHHHHHHHHHHBC-SSCEEEEEECG
T ss_pred EEcchHhh-c---cCHHHHHHHHHHHhC-CcEEEEEEcCC
Confidence 99999998 4 346788999999999 99888887664
No 91
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.53 E-value=6.6e-14 Score=121.78 Aligned_cols=114 Identities=17% Similarity=0.063 Sum_probs=86.5
Q ss_pred CCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEE
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
.++.+|||+|||+|..+..++..+..+|+|+|+|+.+++.|+++....+...+++++++|+.... ..+....++||+|
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~~~fD~i 120 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRAL--EQFYEEKLQFDLV 120 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHH--HHHHHTTCCEEEE
T ss_pred cCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHH--HHHHhcCCCCCEE
Confidence 36789999999999888877776667999999999999999999877654447899999975421 1111125789999
Q ss_pred EEccchhhccCCHHHHHHHHHHH--HhcccCCcEEEEEeCCch
Q 018352 110 CCFQHLQMCFETEERARRLLQNV--SSLLKPGGYFLGITPDSS 150 (357)
Q Consensus 110 ~~~~~lh~~fes~~~~~~~L~~i--~~~LkpGG~fi~t~pd~~ 150 (357)
++...++. ... ..+++.+ .++|+|||++++.++...
T Consensus 121 ~~~~~~~~--~~~---~~~~~~l~~~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 121 LLDPPYAK--QEI---VSQLEKMLERQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp EECCCGGG--CCH---HHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred EECCCCCc--hhH---HHHHHHHHHhcccCCCCEEEEEeCCcc
Confidence 99877553 222 3445555 899999999999877753
No 92
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.53 E-value=6e-14 Score=135.54 Aligned_cols=107 Identities=15% Similarity=0.098 Sum_probs=87.7
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
..++.+|||||||+|..+..+++.+..+|+|+|+|+ |++.|+++.+.++...+++++++|+...++ +.++||+
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~------~~~~~D~ 134 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHL------PVEKVDV 134 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCC------SCSCEEE
T ss_pred hcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcC------CCCcEEE
Confidence 356789999999999888877777767999999996 999999998876655579999999987655 4578999
Q ss_pred EEEccchhhccCCHHHHHHHHHHHHhcccCCcEEE
Q 018352 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFL 143 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi 143 (357)
|++....+. +.+......+++++.++|||||+++
T Consensus 135 Ivs~~~~~~-l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 135 IISEWMGYF-LLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp EEECCCBTT-BTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred EEEcCchhh-ccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 998763222 3345567889999999999999997
No 93
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.53 E-value=2.5e-14 Score=129.70 Aligned_cols=118 Identities=15% Similarity=0.169 Sum_probs=88.8
Q ss_pred CCCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCccc
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FD 107 (357)
..++.+|||||||+|..+..++.. +...|+|+|+|+.|++.|+++.+..+.. ++.|+++|+... +...+ ++++||
T Consensus 32 ~~~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~-nv~~~~~Da~~~-l~~~~--~~~~~d 107 (218)
T 3dxy_A 32 GREAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLS-NLRVMCHDAVEV-LHKMI--PDNSLR 107 (218)
T ss_dssp SSCCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCS-SEEEECSCHHHH-HHHHS--CTTCEE
T ss_pred CCCCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCC-cEEEEECCHHHH-HHHHc--CCCChh
Confidence 346789999999999988888776 4568999999999999999998765433 699999997542 10001 468999
Q ss_pred EEEEccchhhccCCHHHH-----HHHHHHHHhcccCCcEEEEEeCCchH
Q 018352 108 LVCCFQHLQMCFETEERA-----RRLLQNVSSLLKPGGYFLGITPDSST 151 (357)
Q Consensus 108 lV~~~~~lh~~fes~~~~-----~~~L~~i~~~LkpGG~fi~t~pd~~~ 151 (357)
.|++.+...| ....... ..+++.++++|||||+|++.+.+...
T Consensus 108 ~v~~~~~~p~-~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~~ 155 (218)
T 3dxy_A 108 MVQLFFPDPW-HKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPY 155 (218)
T ss_dssp EEEEESCCCC-CSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHHH
T ss_pred eEEEeCCCCc-cchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHHH
Confidence 9999876554 2111111 25899999999999999999877643
No 94
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.52 E-value=1.3e-14 Score=143.27 Aligned_cols=117 Identities=15% Similarity=0.238 Sum_probs=85.2
Q ss_pred HHHHHc-CCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh
Q 018352 23 ALIKIY-SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE 101 (357)
Q Consensus 23 ~Li~~~-~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~ 101 (357)
.++..+ ..++.+|||||||+|..+..+...+. +|+|+|+|+.|++.|+++.. ..... .........++.
T Consensus 98 ~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~-~v~gvD~s~~~~~~a~~~~~--------~~~~~-~~~~~~~~~l~~ 167 (416)
T 4e2x_A 98 DFLATELTGPDPFIVEIGCNDGIMLRTIQEAGV-RHLGFEPSSGVAAKAREKGI--------RVRTD-FFEKATADDVRR 167 (416)
T ss_dssp HHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTC-EEEEECCCHHHHHHHHTTTC--------CEECS-CCSHHHHHHHHH
T ss_pred HHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCC-cEEEECCCHHHHHHHHHcCC--------Cccee-eechhhHhhccc
Confidence 334443 24678999999999998888877655 99999999999999987611 11111 111111111222
Q ss_pred cCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCchHHH
Q 018352 102 KANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIW 153 (357)
Q Consensus 102 ~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~i~ 153 (357)
.+++||+|+|..++|| +. +...++++++++|||||++++.+|+...+.
T Consensus 168 ~~~~fD~I~~~~vl~h-~~---d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~ 215 (416)
T 4e2x_A 168 TEGPANVIYAANTLCH-IP---YVQSVLEGVDALLAPDGVFVFEDPYLGDIV 215 (416)
T ss_dssp HHCCEEEEEEESCGGG-CT---THHHHHHHHHHHEEEEEEEEEEEECHHHHH
T ss_pred CCCCEEEEEECChHHh-cC---CHHHHHHHHHHHcCCCeEEEEEeCChHHhh
Confidence 3589999999999999 43 578899999999999999999999976553
No 95
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.51 E-value=2.9e-14 Score=127.20 Aligned_cols=110 Identities=12% Similarity=0.045 Sum_probs=85.4
Q ss_pred CCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCC-ceeEEEEcCCCCCchhhhhhhcCCc-ccE
Q 018352 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKN-FIAEFFEADPCAENFETQMQEKANQ-ADL 108 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~-~~v~f~~~D~~~~~~~~~l~~~~~~-FDl 108 (357)
++.+|||+|||+|..+..++..+..+|+|+|+|+.|++.|+++.+..+.. .+++|+++|+..... .+ ..++ ||+
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~--~~--~~~~~fD~ 128 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLK--QP--QNQPHFDV 128 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTT--SC--CSSCCEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHH--hh--ccCCCCCE
Confidence 56899999999998888777777679999999999999999998776532 378999999754211 00 2467 999
Q ss_pred EEEccchhhccCCHHHHHHHHHHH--HhcccCCcEEEEEeCCc
Q 018352 109 VCCFQHLQMCFETEERARRLLQNV--SSLLKPGGYFLGITPDS 149 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~i--~~~LkpGG~fi~t~pd~ 149 (357)
|++...+|. .....+++.+ .++|+|||++++.+...
T Consensus 129 I~~~~~~~~-----~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 129 VFLDPPFHF-----NLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp EEECCCSSS-----CHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred EEECCCCCC-----ccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 999876442 2456678888 77899999999886654
No 96
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.51 E-value=1.8e-14 Score=123.92 Aligned_cols=100 Identities=14% Similarity=0.202 Sum_probs=83.7
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
..++.+|||+|||+|..+..++.... +++|+|+|+.+++.|+++. .++.+..+| .++ .+++||+
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~------~~v~~~~~d---~~~------~~~~~D~ 78 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIALKEVKEKF------DSVITLSDP---KEI------PDNSVDF 78 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHHHHHHHHC------TTSEEESSG---GGS------CTTCEEE
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHHHhC------CCcEEEeCC---CCC------CCCceEE
Confidence 35678999999999988888877664 9999999999999999882 167889888 333 4689999
Q ss_pred EEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCC
Q 018352 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
|+|..++|+ +. +...+++++.++|||||++++..++
T Consensus 79 v~~~~~l~~-~~---~~~~~l~~~~~~L~pgG~l~~~~~~ 114 (170)
T 3i9f_A 79 ILFANSFHD-MD---DKQHVISEVKRILKDDGRVIIIDWR 114 (170)
T ss_dssp EEEESCSTT-CS---CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEccchhc-cc---CHHHHHHHHHHhcCCCCEEEEEEcC
Confidence 999999998 43 4568999999999999999998554
No 97
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.51 E-value=5.1e-14 Score=137.81 Aligned_cols=107 Identities=16% Similarity=0.099 Sum_probs=89.6
Q ss_pred CCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEE
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
.++.+|||||||+|..+..+++.+..+|+|+|+| .|++.|+++.+.++...+++++++|+....+ + ++||+|
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~------~-~~~D~I 133 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISL------P-EKVDVI 133 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCC------S-SCEEEE
T ss_pred CCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCc------C-CcceEE
Confidence 4788999999999988888888777799999999 9999999999877665569999999977554 3 789999
Q ss_pred EEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 110 ~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
+|....|+ +..+.....+++.+.++|||||+++..
T Consensus 134 v~~~~~~~-l~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 134 ISEWMGYF-LLRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp EECCCBTT-BTTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred EEcChhhc-ccchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 99664454 445556788999999999999999754
No 98
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.51 E-value=1.2e-13 Score=124.41 Aligned_cols=106 Identities=11% Similarity=-0.018 Sum_probs=79.4
Q ss_pred CCCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCccc
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FD 107 (357)
+.++.+|||+|||+|..+..++.. +.++|+|+|+|+.|++.+.++.+.. .++.++.+|+....... . ..++||
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~---~~v~~~~~d~~~~~~~~--~-~~~~fD 128 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER---NNIIPLLFDASKPWKYS--G-IVEKVD 128 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC---SSEEEECSCTTCGGGTT--T-TCCCEE
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC---CCeEEEEcCCCCchhhc--c-ccccee
Confidence 357889999999999887777665 3468999999999988777665543 26888889986631100 0 137899
Q ss_pred EEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEe
Q 018352 108 LVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 108 lV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~ 146 (357)
+|+|... ...+...++++++++|||||+|++.+
T Consensus 129 ~V~~~~~------~~~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 129 LIYQDIA------QKNQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp EEEECCC------STTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEecc------ChhHHHHHHHHHHHHhCCCCEEEEEE
Confidence 9998742 12345667999999999999999885
No 99
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.50 E-value=1.5e-13 Score=122.25 Aligned_cols=102 Identities=12% Similarity=0.040 Sum_probs=85.4
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
..++.+|||+|||+|..+..++.. ..+|+|+|+|+.+++.|+++.+..+.. +++++.+|+..... ..++||+
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~------~~~~~D~ 146 (210)
T 3lbf_A 75 LTPQSRVLEIGTGSGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLH-NVSTRHGDGWQGWQ------ARAPFDA 146 (210)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCG------GGCCEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCC-ceEEEECCcccCCc------cCCCccE
Confidence 357889999999999888887777 569999999999999999998765443 68999999876443 3478999
Q ss_pred EEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCC
Q 018352 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
|++..++|+.. .++.++|||||++++.+++
T Consensus 147 i~~~~~~~~~~----------~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 147 IIVTAAPPEIP----------TALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp EEESSBCSSCC----------THHHHTEEEEEEEEEEECS
T ss_pred EEEccchhhhh----------HHHHHhcccCcEEEEEEcC
Confidence 99999998833 2578999999999999877
No 100
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.50 E-value=1.1e-13 Score=124.73 Aligned_cols=116 Identities=14% Similarity=0.107 Sum_probs=88.5
Q ss_pred CCCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCccc
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FD 107 (357)
..++.+|||||||+|..+..++.. +..+|+|+|+|+.+++.|+++....+. .++.|+++|+.. +...+ .+++||
T Consensus 36 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~-~nv~~~~~d~~~--l~~~~--~~~~~d 110 (213)
T 2fca_A 36 GNDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEA-QNVKLLNIDADT--LTDVF--EPGEVK 110 (213)
T ss_dssp TSCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCC-SSEEEECCCGGG--HHHHC--CTTSCC
T ss_pred CCCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCC-CCEEEEeCCHHH--HHhhc--CcCCcC
Confidence 346789999999999988888776 456999999999999999999876543 369999999865 21111 357899
Q ss_pred EEEEccchhhccCCHH-----HHHHHHHHHHhcccCCcEEEEEeCCch
Q 018352 108 LVCCFQHLQMCFETEE-----RARRLLQNVSSLLKPGGYFLGITPDSS 150 (357)
Q Consensus 108 lV~~~~~lh~~fes~~-----~~~~~L~~i~~~LkpGG~fi~t~pd~~ 150 (357)
.|++.+...+ ..... ....+++++.++|||||.|++.+.+..
T Consensus 111 ~v~~~~~~p~-~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~ 157 (213)
T 2fca_A 111 RVYLNFSDPW-PKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRG 157 (213)
T ss_dssp EEEEESCCCC-CSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHH
T ss_pred EEEEECCCCC-cCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHH
Confidence 9998775544 11100 035789999999999999999987753
No 101
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.50 E-value=1.2e-13 Score=129.82 Aligned_cols=117 Identities=16% Similarity=0.176 Sum_probs=85.4
Q ss_pred HHHHHHHHcCCCCCEEEEECCCCChhH----HHHHHh-c----CCeEEEEeCChHHHHHHHHHhHh--------------
Q 018352 20 AKTALIKIYSHPYVTVCDLYCGAGVDV----DKWETA-L----IANYIGIDVATSGIGEARDTWEN-------------- 76 (357)
Q Consensus 20 vks~Li~~~~~~~~~VLDlGCG~G~~l----~k~~~~-~----~~~v~GiDiS~~~l~~A~~r~~~-------------- 76 (357)
.+..++.. .+..+|||+|||+|... ..+... + ..+|+|+|+|+.||+.|++..-.
T Consensus 96 l~~~llp~--~~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~ 173 (274)
T 1af7_A 96 LAEHARRR--HGEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQR 173 (274)
T ss_dssp HHHHHHHS--CSCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHH
T ss_pred HHHHccCC--CCCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHH
Confidence 34444443 24579999999999732 233333 2 23899999999999999986310
Q ss_pred -----c---C--C------CceeEEEEcCCCCCchhhhhhhcCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCc
Q 018352 77 -----Q---R--K------NFIAEFFEADPCAENFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGG 140 (357)
Q Consensus 77 -----~---~--~------~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG 140 (357)
. . . ..++.|.++|+...++. ..++||+|+|.++++| | +.+..++++++++++|+|||
T Consensus 174 ~f~~~~~~~~~~~~v~~~lr~~V~F~~~dl~~~~~~-----~~~~fDlI~crnvliy-f-~~~~~~~vl~~~~~~L~pgG 246 (274)
T 1af7_A 174 YFMRGTGPHEGLVRVRQELANYVEFSSVNLLEKQYN-----VPGPFDAIFCRNVMIY-F-DKTTQEDILRRFVPLLKPDG 246 (274)
T ss_dssp HEEECCTTSCSEEEECHHHHTTEEEEECCTTCSSCC-----CCCCEEEEEECSSGGG-S-CHHHHHHHHHHHGGGEEEEE
T ss_pred HhhccccCCCCceeechhhcccCeEEecccCCCCCC-----cCCCeeEEEECCchHh-C-CHHHHHHHHHHHHHHhCCCc
Confidence 0 0 0 02589999999875441 1468999999999999 7 45667899999999999999
Q ss_pred EEEEE
Q 018352 141 YFLGI 145 (357)
Q Consensus 141 ~fi~t 145 (357)
+|++.
T Consensus 247 ~L~lg 251 (274)
T 1af7_A 247 LLFAG 251 (274)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 99864
No 102
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.50 E-value=9.2e-14 Score=127.46 Aligned_cols=119 Identities=13% Similarity=0.118 Sum_probs=84.1
Q ss_pred cCCCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhc-----CCCceeEEEEcCCCCCchhhhhhh
Q 018352 28 YSHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQ-----RKNFIAEFFEADPCAENFETQMQE 101 (357)
Q Consensus 28 ~~~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~-----~~~~~v~f~~~D~~~~~~~~~l~~ 101 (357)
+..++.+|||||||+|..+..++.. +...|+|+|+|+.|++.|+++++.. ....++.|+++|+... +...+
T Consensus 43 ~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~-l~~~~-- 119 (235)
T 3ckk_A 43 RAQAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKH-LPNFF-- 119 (235)
T ss_dssp ---CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTC-HHHHC--
T ss_pred ccCCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHh-hhhhC--
Confidence 3446779999999999988887765 4568999999999999999876531 1123799999998651 11111
Q ss_pred cCCcccEEEEccchhhccCCHH-HH----HHHHHHHHhcccCCcEEEEEeCCch
Q 018352 102 KANQADLVCCFQHLQMCFETEE-RA----RRLLQNVSSLLKPGGYFLGITPDSS 150 (357)
Q Consensus 102 ~~~~FDlV~~~~~lh~~fes~~-~~----~~~L~~i~~~LkpGG~fi~t~pd~~ 150 (357)
..++||.|++.+...+ +.... +. ..++++++++|||||.|++.+.+..
T Consensus 120 ~~~~~D~v~~~~~dp~-~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~~ 172 (235)
T 3ckk_A 120 YKGQLTKMFFLFPDPH-FKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVLE 172 (235)
T ss_dssp CTTCEEEEEEESCC------------CCCHHHHHHHHHHEEEEEEEEEEESCHH
T ss_pred CCcCeeEEEEeCCCch-hhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCHH
Confidence 3578999998775544 21111 11 3699999999999999999988754
No 103
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.50 E-value=4.2e-13 Score=141.08 Aligned_cols=111 Identities=20% Similarity=0.351 Sum_probs=92.5
Q ss_pred CCCEEEEECCCCChhHHHHHHhc--CCeEEEEeCChHHHHHHHHHhHhcC-----CCceeEEEEcCCCCCchhhhhhhcC
Q 018352 31 PYVTVCDLYCGAGVDVDKWETAL--IANYIGIDVATSGIGEARDTWENQR-----KNFIAEFFEADPCAENFETQMQEKA 103 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~~--~~~v~GiDiS~~~l~~A~~r~~~~~-----~~~~v~f~~~D~~~~~~~~~l~~~~ 103 (357)
++.+|||||||+|..+..++... ..+|+|+|+|+.|++.|++++.... ...+++|+++|+...++ ..
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~------~d 794 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDS------RL 794 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCT------TS
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCc------cc
Confidence 67899999999998887776654 2699999999999999999765321 12379999999988666 46
Q ss_pred CcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCch
Q 018352 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (357)
Q Consensus 104 ~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~ 150 (357)
++||+|+|..++|| + .......+++++.++|||| .+++++|+.+
T Consensus 795 ~sFDlVV~~eVLeH-L-~dp~l~~~L~eI~RvLKPG-~LIISTPN~e 838 (950)
T 3htx_A 795 HDVDIGTCLEVIEH-M-EEDQACEFGEKVLSLFHPK-LLIVSTPNYE 838 (950)
T ss_dssp CSCCEEEEESCGGG-S-CHHHHHHHHHHHHHTTCCS-EEEEEECBGG
T ss_pred CCeeEEEEeCchhh-C-ChHHHHHHHHHHHHHcCCC-EEEEEecCch
Confidence 89999999999999 5 4455678999999999999 9999999974
No 104
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.50 E-value=2.4e-13 Score=117.99 Aligned_cols=110 Identities=16% Similarity=0.135 Sum_probs=88.5
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
..++.+|||+|||+|..+..++... .+|+|+|+|+.+++.|++++...+...++.+.++|+.. .+ . ..++||+
T Consensus 31 ~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~----~-~~~~~D~ 103 (192)
T 1l3i_A 31 PGKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE-AL----C-KIPDIDI 103 (192)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH-HH----T-TSCCEEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH-hc----c-cCCCCCE
Confidence 4578899999999998887776666 79999999999999999988766543478899998644 22 1 1258999
Q ss_pred EEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCchHH
Q 018352 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTI 152 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~i 152 (357)
|++...+++ ...+++++.++|+|||++++..++....
T Consensus 104 v~~~~~~~~-------~~~~l~~~~~~l~~gG~l~~~~~~~~~~ 140 (192)
T 1l3i_A 104 AVVGGSGGE-------LQEILRIIKDKLKPGGRIIVTAILLETK 140 (192)
T ss_dssp EEESCCTTC-------HHHHHHHHHHTEEEEEEEEEEECBHHHH
T ss_pred EEECCchHH-------HHHHHHHHHHhcCCCcEEEEEecCcchH
Confidence 999886654 4678999999999999999998876543
No 105
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.49 E-value=3.4e-13 Score=126.46 Aligned_cols=112 Identities=13% Similarity=0.150 Sum_probs=86.3
Q ss_pred CCCEEEEECCCC---ChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchh-------hhh
Q 018352 31 PYVTVCDLYCGA---GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFE-------TQM 99 (357)
Q Consensus 31 ~~~~VLDlGCG~---G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~-------~~l 99 (357)
...+|||||||+ |..+..+... +..+|+|+|+|+.||+.|+++.... .+++|+++|+...... ..+
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~---~~v~~~~~D~~~~~~~~~~~~~~~~~ 153 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKD---PNTAVFTADVRDPEYILNHPDVRRMI 153 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTC---TTEEEEECCTTCHHHHHHSHHHHHHC
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCC---CCeEEEEeeCCCchhhhccchhhccC
Confidence 347999999999 9655444333 4569999999999999999988532 2689999999763211 111
Q ss_pred hhcCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 100 QEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 100 ~~~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
...+||+|++..++|| +... +...++++++++|+|||+|+++....
T Consensus 154 --d~~~~d~v~~~~vlh~-~~d~-~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 154 --DFSRPAAIMLVGMLHY-LSPD-VVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp --CTTSCCEEEETTTGGG-SCTT-THHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred --CCCCCEEEEEechhhh-CCcH-HHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 2258999999999999 5443 57889999999999999999885543
No 106
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.49 E-value=1.2e-13 Score=132.72 Aligned_cols=106 Identities=17% Similarity=0.111 Sum_probs=86.9
Q ss_pred CCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEE
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
.++.+|||+|||+|..+..+++.+..+|+|+|+| .|++.|+++.+.++...+++++++|+...++ +.++||+|
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~------~~~~~D~I 109 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHL------PFPKVDII 109 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCC------SSSCEEEE
T ss_pred cCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccC------CCCcccEE
Confidence 4678999999999988877777777799999999 6999999998877655579999999987655 45789999
Q ss_pred EEccchhhccCCHHHHHHHHHHHHhcccCCcEEE
Q 018352 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFL 143 (357)
Q Consensus 110 ~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi 143 (357)
+|....+. +.++.....++.++.++|||||+++
T Consensus 110 vs~~~~~~-l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 110 ISEWMGYF-LLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp EECCCBTT-BSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred EEeCchhh-cccHHHHHHHHHHHHhhcCCCeEEE
Confidence 99754443 3344556788999999999999997
No 107
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.49 E-value=9.3e-14 Score=118.93 Aligned_cols=111 Identities=10% Similarity=0.063 Sum_probs=82.5
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
.+++.+|||+|||+|..+..++..+. .++|+|+|+.+++.|+++.+..+. +++++++|+... ........++||+
T Consensus 39 ~~~~~~vLD~GcG~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~--~~~~~~~~~~~D~ 113 (171)
T 1ws6_A 39 YPRRGRFLDPFAGSGAVGLEAASEGW-EAVLVEKDPEAVRLLKENVRRTGL--GARVVALPVEVF--LPEAKAQGERFTV 113 (171)
T ss_dssp CTTCCEEEEETCSSCHHHHHHHHTTC-EEEEECCCHHHHHHHHHHHHHHTC--CCEEECSCHHHH--HHHHHHTTCCEEE
T ss_pred ccCCCeEEEeCCCcCHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHHcCC--ceEEEeccHHHH--HHhhhccCCceEE
Confidence 34678999999999988888877655 599999999999999999877644 788999987541 1111112358999
Q ss_pred EEEccchhhccCCHHHHHHHHHHH--HhcccCCcEEEEEeCCch
Q 018352 109 VCCFQHLQMCFETEERARRLLQNV--SSLLKPGGYFLGITPDSS 150 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~i--~~~LkpGG~fi~t~pd~~ 150 (357)
|++...+|. ..+ .+++.+ .++|+|||++++.++...
T Consensus 114 i~~~~~~~~---~~~---~~~~~~~~~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 114 AFMAPPYAM---DLA---ALFGELLASGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp EEECCCTTS---CTT---HHHHHHHHHTCEEEEEEEEEEEETTS
T ss_pred EEECCCCch---hHH---HHHHHHHhhcccCCCcEEEEEeCCcc
Confidence 999876651 222 334444 499999999999877654
No 108
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.48 E-value=2.8e-13 Score=124.26 Aligned_cols=106 Identities=13% Similarity=0.061 Sum_probs=85.4
Q ss_pred CCCCCEEEEECCCCChhHHHHHHh--cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcc
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~--~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~F 106 (357)
++|+.+|||+|||+|.++..+++. +.++|+|+|+|+.|++.++++.+.. .++..+.+|+...... .....++
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~---~ni~~V~~d~~~p~~~---~~~~~~v 148 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR---RNIFPILGDARFPEKY---RHLVEGV 148 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC---TTEEEEESCTTCGGGG---TTTCCCE
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh---cCeeEEEEeccCcccc---ccccceE
Confidence 568999999999999999888875 5679999999999999999887654 2688899998764321 1235789
Q ss_pred cEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEe
Q 018352 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 107 DlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~ 146 (357)
|+|++....| ++...++.++.+.|||||++++..
T Consensus 149 DvVf~d~~~~------~~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 149 DGLYADVAQP------EQAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp EEEEECCCCT------THHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEEeccCC------hhHHHHHHHHHHhccCCCEEEEEE
Confidence 9998765433 357789999999999999999864
No 109
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.48 E-value=4.4e-13 Score=127.84 Aligned_cols=109 Identities=18% Similarity=0.121 Sum_probs=91.4
Q ss_pred CCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
.++.+|||+|||+|..+..++.. +..+++|+|+| .+++.|+++....+...+++|+.+|+...++ + ..||+
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~------~-~~~D~ 235 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDY------G-NDYDL 235 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCC------C-SCEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCC------C-CCCcE
Confidence 56789999999999888888776 35699999999 9999999998765544479999999987544 2 34999
Q ss_pred EEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCC
Q 018352 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
|+|..++|+ + +.++..+++++++++|+|||++++..+.
T Consensus 236 v~~~~~l~~-~-~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 273 (335)
T 2r3s_A 236 VLLPNFLHH-F-DVATCEQLLRKIKTALAVEGKVIVFDFI 273 (335)
T ss_dssp EEEESCGGG-S-CHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EEEcchhcc-C-CHHHHHHHHHHHHHhCCCCcEEEEEeec
Confidence 999999998 5 5667789999999999999999887544
No 110
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.48 E-value=2.6e-13 Score=125.54 Aligned_cols=102 Identities=21% Similarity=0.333 Sum_probs=84.5
Q ss_pred CCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
.++.+|||+|||+|..+..++.. +..+|+|+|+|+.+++.|+++.. ++.|..+|+...++ .+++||+
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~------~~~~~~~d~~~~~~------~~~~fD~ 151 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYP------QVTFCVASSHRLPF------SDTSMDA 151 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCT------TSEEEECCTTSCSB------CTTCEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCC------CcEEEEcchhhCCC------CCCceeE
Confidence 57889999999999888888776 35699999999999999988752 56889999877665 4578999
Q ss_pred EEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCchHHHH
Q 018352 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWA 154 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~i~~ 154 (357)
|++.++.+ +++++.++|||||++++.+|+...++.
T Consensus 152 v~~~~~~~-----------~l~~~~~~L~pgG~l~~~~~~~~~~~~ 186 (269)
T 1p91_A 152 IIRIYAPC-----------KAEELARVVKPGGWVITATPGPRHLME 186 (269)
T ss_dssp EEEESCCC-----------CHHHHHHHEEEEEEEEEEEECTTTTHH
T ss_pred EEEeCChh-----------hHHHHHHhcCCCcEEEEEEcCHHHHHH
Confidence 99876432 378999999999999999998766543
No 111
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.47 E-value=6.1e-13 Score=125.94 Aligned_cols=105 Identities=10% Similarity=-0.043 Sum_probs=84.1
Q ss_pred CCCCCEEEEECCCCChhHHHH-HHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCccc
Q 018352 29 SHPYVTVCDLYCGAGVDVDKW-ETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~-~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FD 107 (357)
+.++.+|||||||+|+.+..+ ++....+|+|+|+|++|++.|+++.+..+. .+++|+++|+.. + ++++||
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~--l------~d~~FD 190 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETV--I------DGLEFD 190 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGG--G------GGCCCS
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhh--C------CCCCcC
Confidence 458899999999999765443 343567999999999999999999887655 589999999865 3 247899
Q ss_pred EEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 108 LVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 108 lV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
+|++... . .+..++++++.++|||||++++...+.
T Consensus 191 vV~~~a~----~---~d~~~~l~el~r~LkPGG~Lvv~~~~~ 225 (298)
T 3fpf_A 191 VLMVAAL----A---EPKRRVFRNIHRYVDTETRIIYRTYTG 225 (298)
T ss_dssp EEEECTT----C---SCHHHHHHHHHHHCCTTCEEEEEECCG
T ss_pred EEEECCC----c---cCHHHHHHHHHHHcCCCcEEEEEcCcc
Confidence 9987652 1 346688999999999999999886543
No 112
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.47 E-value=4.1e-13 Score=130.49 Aligned_cols=107 Identities=15% Similarity=0.067 Sum_probs=90.6
Q ss_pred CCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCc--hhhhhhhcCCcc
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAEN--FETQMQEKANQA 106 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~--~~~~l~~~~~~F 106 (357)
....+|||||||+|..+..+++. +..+++++|+ +.+++.|+++.+..+...+++|+.+|+.... + + ++|
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~------p-~~~ 249 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPF------P-TGF 249 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCC------C-CCC
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCC------C-CCc
Confidence 35689999999999988888775 4569999999 9999999999876554457999999998753 4 2 689
Q ss_pred cEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEe
Q 018352 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 107 DlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~ 146 (357)
|+|++..++|+ + +.++..++|++++++|||||++++..
T Consensus 250 D~v~~~~vlh~-~-~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 250 DAVWMSQFLDC-F-SEEEVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp SEEEEESCSTT-S-CHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred CEEEEechhhh-C-CHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 99999999998 5 56678899999999999999998874
No 113
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.47 E-value=4e-13 Score=128.56 Aligned_cols=106 Identities=16% Similarity=0.065 Sum_probs=89.4
Q ss_pred CCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEE
Q 018352 31 PYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
+..+|||+|||+|..+..+++. +..+++++|+ +.+++.|+++....+...+++|..+|+. .++ + .+||+|
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~------p-~~~D~v 239 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-DPL------P-AGAGGY 239 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-SCC------C-CSCSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-CCC------C-CCCcEE
Confidence 4579999999999888888775 4568999999 9999999999877655457999999997 343 2 389999
Q ss_pred EEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeC
Q 018352 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (357)
Q Consensus 110 ~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~p 147 (357)
+|..++|+ + +.++..++|++++++|+|||++++..+
T Consensus 240 ~~~~vlh~-~-~~~~~~~~l~~~~~~L~pgG~l~i~e~ 275 (332)
T 3i53_A 240 VLSAVLHD-W-DDLSAVAILRRCAEAAGSGGVVLVIEA 275 (332)
T ss_dssp EEESCGGG-S-CHHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred EEehhhcc-C-CHHHHHHHHHHHHHhcCCCCEEEEEee
Confidence 99999998 6 456678999999999999999998744
No 114
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.47 E-value=6.9e-13 Score=114.36 Aligned_cols=106 Identities=8% Similarity=-0.017 Sum_probs=86.0
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
..++.+|||+|||+|..+..++. +..+++|+|+|+.+++.|+++.+..+. .+++++++|+.. .+ +.++||+
T Consensus 33 ~~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~~d~~~-~~------~~~~~D~ 103 (183)
T 2yxd_A 33 LNKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNI-KNCQIIKGRAED-VL------DKLEFNK 103 (183)
T ss_dssp CCTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTC-CSEEEEESCHHH-HG------GGCCCSE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCC-CcEEEEECCccc-cc------cCCCCcE
Confidence 34678999999999988877766 667999999999999999999876543 368999999765 33 3368999
Q ss_pred EEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCchHHH
Q 018352 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIW 153 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~i~ 153 (357)
|+|... .....+++++.++ |||++++..++.+.+.
T Consensus 104 i~~~~~--------~~~~~~l~~~~~~--~gG~l~~~~~~~~~~~ 138 (183)
T 2yxd_A 104 AFIGGT--------KNIEKIIEILDKK--KINHIVANTIVLENAA 138 (183)
T ss_dssp EEECSC--------SCHHHHHHHHHHT--TCCEEEEEESCHHHHH
T ss_pred EEECCc--------ccHHHHHHHHhhC--CCCEEEEEecccccHH
Confidence 999886 2356788888888 9999999998876543
No 115
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.46 E-value=6.5e-14 Score=124.29 Aligned_cols=106 Identities=10% Similarity=0.095 Sum_probs=84.1
Q ss_pred HcCCCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCc
Q 018352 27 IYSHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQ 105 (357)
Q Consensus 27 ~~~~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~ 105 (357)
.++++..+|||||||+|..+..|... +..+|+|+|+|+.|++.|+++....+...++.| +|.... . ..++
T Consensus 45 ~~l~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~-~------~~~~ 115 (200)
T 3fzg_A 45 GNIKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESD-V------YKGT 115 (200)
T ss_dssp HHSCCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHH-H------TTSE
T ss_pred hhcCCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--eccccc-C------CCCC
Confidence 34577889999999999888887665 445999999999999999999987665445655 554321 1 4688
Q ss_pred ccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 106 FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
||+|+....+|+ + ++.+..+..+.+.|+|||+||--
T Consensus 116 ~DvVLa~k~LHl-L---~~~~~al~~v~~~L~pggvfISf 151 (200)
T 3fzg_A 116 YDVVFLLKMLPV-L---KQQDVNILDFLQLFHTQNFVISF 151 (200)
T ss_dssp EEEEEEETCHHH-H---HHTTCCHHHHHHTCEEEEEEEEE
T ss_pred cChhhHhhHHHh-h---hhhHHHHHHHHHHhCCCCEEEEe
Confidence 999999999999 3 45666777999999999988754
No 116
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.46 E-value=1.1e-12 Score=128.60 Aligned_cols=111 Identities=15% Similarity=0.128 Sum_probs=92.3
Q ss_pred CCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEEE
Q 018352 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~ 110 (357)
++.+|||+|||+|..+..++..+ .+|+|+|+|+.+++.|+++.+.++. +++|+++|+..... ..++||+|+
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g-~~V~gvDis~~al~~A~~n~~~~~~--~v~~~~~D~~~~~~------~~~~fD~Ii 303 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMG-AEVVGVEDDLASVLSLQKGLEANAL--KAQALHSDVDEALT------EEARFDIIV 303 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTT-CEEEEEESBHHHHHHHHHHHHHTTC--CCEEEECSTTTTSC------TTCCEEEEE
T ss_pred CCCEEEEEeeeCCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCC--CeEEEEcchhhccc------cCCCeEEEE
Confidence 67899999999999988887775 4999999999999999999887643 48999999977544 347899999
Q ss_pred Eccchhhcc-CCHHHHHHHHHHHHhcccCCcEEEEEeCCch
Q 018352 111 CFQHLQMCF-ETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (357)
Q Consensus 111 ~~~~lh~~f-es~~~~~~~L~~i~~~LkpGG~fi~t~pd~~ 150 (357)
|+..+|+.- ...+...++++++.++|||||++++.+....
T Consensus 304 ~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l 344 (381)
T 3dmg_A 304 TNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFL 344 (381)
T ss_dssp ECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTTS
T ss_pred ECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCCC
Confidence 998888621 1246788999999999999999999876553
No 117
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.46 E-value=5.5e-13 Score=120.37 Aligned_cols=101 Identities=12% Similarity=0.052 Sum_probs=83.3
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
..++.+|||+|||+|..+..++... .+|+|+|+|+.+++.|+++....+ ++.++++|+..... ..++||+
T Consensus 68 ~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~---~v~~~~~d~~~~~~------~~~~fD~ 137 (231)
T 1vbf_A 68 LHKGQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYN---NIKLILGDGTLGYE------EEKPYDR 137 (231)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCS---SEEEEESCGGGCCG------GGCCEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcC---CeEEEECCcccccc------cCCCccE
Confidence 3577899999999998888877766 699999999999999999987653 68999999865221 2478999
Q ss_pred EEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
|++..++|+.. .++.++|+|||++++.+++.
T Consensus 138 v~~~~~~~~~~----------~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 138 VVVWATAPTLL----------CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp EEESSBBSSCC----------HHHHHTEEEEEEEEEEECSS
T ss_pred EEECCcHHHHH----------HHHHHHcCCCcEEEEEEcCC
Confidence 99999988832 35888999999999997764
No 118
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.45 E-value=1.8e-12 Score=126.13 Aligned_cols=111 Identities=19% Similarity=0.169 Sum_probs=91.7
Q ss_pred HHHHc-CCCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh
Q 018352 24 LIKIY-SHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE 101 (357)
Q Consensus 24 Li~~~-~~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~ 101 (357)
++..+ ..+..+|||+|||+|..+..+++. +..+++++|+ +.+++.|+++....+...+++|..+|+. .++
T Consensus 194 l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~------ 265 (369)
T 3gwz_A 194 VAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF-ETI------ 265 (369)
T ss_dssp HHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TCC------
T ss_pred HHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CCC------
Confidence 44443 235789999999999988888776 4568999999 9999999999876655557999999997 343
Q ss_pred cCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 102 KANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 102 ~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
+ ..||+|+|..++|+ + +.++..++|++++++|+|||++++.
T Consensus 266 p-~~~D~v~~~~vlh~-~-~d~~~~~~L~~~~~~L~pgG~l~i~ 306 (369)
T 3gwz_A 266 P-DGADVYLIKHVLHD-W-DDDDVVRILRRIATAMKPDSRLLVI 306 (369)
T ss_dssp C-SSCSEEEEESCGGG-S-CHHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred C-CCceEEEhhhhhcc-C-CHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 2 37999999999999 6 5666778999999999999999987
No 119
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.45 E-value=1.4e-13 Score=122.81 Aligned_cols=108 Identities=8% Similarity=0.000 Sum_probs=83.0
Q ss_pred CCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEEE
Q 018352 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~ 110 (357)
++.+|||+|||+|..+..++..+..+|+|+|+|+.|++.|+++.+..+. .+++|+++|+... +....++||+|+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~D~~~~-----~~~~~~~fD~V~ 127 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKA-GNARVVNSNAMSF-----LAQKGTPHNIVF 127 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCHHHH-----HSSCCCCEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEECCHHHH-----HhhcCCCCCEEE
Confidence 5689999999999888877777767999999999999999999877643 3789999987541 111346899999
Q ss_pred EccchhhccCCHHHHHHHHHHHHh--cccCCcEEEEEeCCc
Q 018352 111 CFQHLQMCFETEERARRLLQNVSS--LLKPGGYFLGITPDS 149 (357)
Q Consensus 111 ~~~~lh~~fes~~~~~~~L~~i~~--~LkpGG~fi~t~pd~ 149 (357)
+...+|. .....+++.+.+ +|+|||++++.+...
T Consensus 128 ~~~p~~~-----~~~~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 128 VDPPFRR-----GLLEETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp ECCSSST-----TTHHHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred ECCCCCC-----CcHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 9876543 224456677754 699999999886554
No 120
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.45 E-value=3.2e-13 Score=126.65 Aligned_cols=110 Identities=15% Similarity=0.032 Sum_probs=89.6
Q ss_pred HHHHcCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcC
Q 018352 24 LIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKA 103 (357)
Q Consensus 24 Li~~~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~ 103 (357)
.+..++.++.+|||+|||+|..+..++..+..+|+|+|+|+.|++.|+++.+.++...+++|+++|+..... .
T Consensus 118 ~l~~~~~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-------~ 190 (278)
T 2frn_A 118 RMAKVAKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-------E 190 (278)
T ss_dssp HHHHHCCTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-------C
T ss_pred HHHHhCCCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-------c
Confidence 344556788999999999999999888876658999999999999999998877655468999999977543 4
Q ss_pred CcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCC
Q 018352 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 104 ~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
++||+|++.... ....++.++.++|||||++++.+..
T Consensus 191 ~~fD~Vi~~~p~--------~~~~~l~~~~~~LkpgG~l~~~~~~ 227 (278)
T 2frn_A 191 NIADRILMGYVV--------RTHEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp SCEEEEEECCCS--------SGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred CCccEEEECCch--------hHHHHHHHHHHHCCCCeEEEEEEee
Confidence 789999986531 1256788999999999999987554
No 121
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.45 E-value=2.9e-13 Score=125.70 Aligned_cols=130 Identities=17% Similarity=0.055 Sum_probs=94.7
Q ss_pred HHHHHHHHcCC--CCCEEEEECCCCChhHHHHHHhc-CCeEEEEeCChHHHHHHHHHhHh---cCCCceeEEEEcCCCCC
Q 018352 20 AKTALIKIYSH--PYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWEN---QRKNFIAEFFEADPCAE 93 (357)
Q Consensus 20 vks~Li~~~~~--~~~~VLDlGCG~G~~l~k~~~~~-~~~v~GiDiS~~~l~~A~~r~~~---~~~~~~v~f~~~D~~~~ 93 (357)
..+.++..++. ++.+|||+|||+|..+..++... ..+|+|+|+++.+++.|+++... ++...+++++++|+...
T Consensus 23 ~D~~lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~ 102 (260)
T 2ozv_A 23 MDAMLLASLVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLR 102 (260)
T ss_dssp CHHHHHHHTCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCC
T ss_pred cHHHHHHHHhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHH
Confidence 56778887765 56799999999998887777663 46999999999999999999876 55444699999999775
Q ss_pred chhhh-hhhcCCcccEEEEccchhhc--------------cCCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 94 NFETQ-MQEKANQADLVCCFQHLQMC--------------FETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 94 ~~~~~-l~~~~~~FDlV~~~~~lh~~--------------fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
..... -....++||+|+|+..++.. ++.......+++.+.++|||||+|++..+..
T Consensus 103 ~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 173 (260)
T 2ozv_A 103 AKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQ 173 (260)
T ss_dssp HHHHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGG
T ss_pred hhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHH
Confidence 21000 00035789999998433321 0111225678999999999999999987664
No 122
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.44 E-value=4.9e-13 Score=122.78 Aligned_cols=114 Identities=16% Similarity=0.068 Sum_probs=83.4
Q ss_pred CCCEEEEECCCCChhHHHHHHh---cCCeEEEEeCChHHHHHHHHHhHhc---CCCce----------------------
Q 018352 31 PYVTVCDLYCGAGVDVDKWETA---LIANYIGIDVATSGIGEARDTWENQ---RKNFI---------------------- 82 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~---~~~~v~GiDiS~~~l~~A~~r~~~~---~~~~~---------------------- 82 (357)
++.+|||+|||+|..+..++.. +..+|+|+|+|+.+++.|+++.... +...+
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 5679999999999888887765 3458999999999999999876533 11111
Q ss_pred ---eE-------------EEEcCCCCCchhhhhhhcCCcccEEEEccchhhccC-----CHHHHHHHHHHHHhcccCCcE
Q 018352 83 ---AE-------------FFEADPCAENFETQMQEKANQADLVCCFQHLQMCFE-----TEERARRLLQNVSSLLKPGGY 141 (357)
Q Consensus 83 ---v~-------------f~~~D~~~~~~~~~l~~~~~~FDlV~~~~~lh~~fe-----s~~~~~~~L~~i~~~LkpGG~ 141 (357)
+. |.++|+.......... ...+||+|+|+..+++... ..+....+++++.++|+|||+
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 209 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVL-AGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAV 209 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHH-TTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCE
T ss_pred hhhhhhhccccccccccceeeccccccccccccc-CCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcE
Confidence 55 9999987622100000 1348999999887766221 146788999999999999999
Q ss_pred EEEE
Q 018352 142 FLGI 145 (357)
Q Consensus 142 fi~t 145 (357)
++++
T Consensus 210 l~~~ 213 (250)
T 1o9g_A 210 IAVT 213 (250)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9984
No 123
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.44 E-value=5e-13 Score=121.32 Aligned_cols=104 Identities=16% Similarity=0.072 Sum_probs=81.1
Q ss_pred CCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
.++.+|||+|||+|..+..++.. +..+|+|+|+|+.|++.|+++.+.. .++.++.+|+..... .+. ..++||+
T Consensus 73 ~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~--~~~-~~~~~D~ 146 (230)
T 1fbn_A 73 KRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER---ENIIPILGDANKPQE--YAN-IVEKVDV 146 (230)
T ss_dssp CTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC---TTEEEEECCTTCGGG--GTT-TSCCEEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC---CCeEEEECCCCCccc--ccc-cCccEEE
Confidence 46789999999999888888776 4479999999999999999887654 378999999876211 011 1268999
Q ss_pred EEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
|++ . +........+++++.++|||||+++++
T Consensus 147 v~~-----~-~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 147 IYE-----D-VAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp EEE-----C-CCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEE-----e-cCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 983 2 234445678899999999999999987
No 124
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.44 E-value=5.9e-13 Score=130.96 Aligned_cols=108 Identities=16% Similarity=0.082 Sum_probs=83.6
Q ss_pred CCCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhH-------hcCC-CceeEEEEcCCCCCchhhhh
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWE-------NQRK-NFIAEFFEADPCAENFETQM 99 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~-------~~~~-~~~v~f~~~D~~~~~~~~~l 99 (357)
+.++.+|||||||+|..+..++.. +..+++|||+|+.+++.|++..+ ..+. ..+++|+++|+...++...
T Consensus 171 l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d~- 249 (438)
T 3uwp_A 171 MTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRER- 249 (438)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHHH-
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCccccc-
Confidence 568899999999999888877754 55569999999999999987542 2222 2479999999988665321
Q ss_pred hhcCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 100 QEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 100 ~~~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
...||+|+++..+ | . .+..+.|+++.+.|||||+|+.+
T Consensus 250 ---~~~aDVVf~Nn~~---F-~-pdl~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 250 ---IANTSVIFVNNFA---F-G-PEVDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp ---HHTCSEEEECCTT---C-C-HHHHHHHHHHHTTSCTTCEEEES
T ss_pred ---cCCccEEEEcccc---c-C-chHHHHHHHHHHcCCCCcEEEEe
Confidence 1469999987644 3 2 45777889999999999999977
No 125
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.44 E-value=4.3e-13 Score=129.85 Aligned_cols=107 Identities=17% Similarity=0.113 Sum_probs=86.1
Q ss_pred CCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEE
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
.++.+|||||||+|..+..+++.+..+|+|+|+|+ +++.|+++.+.++...+++++.+|+...++ .++||+|
T Consensus 49 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~-------~~~~D~I 120 (348)
T 2y1w_A 49 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSL-------PEQVDII 120 (348)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCC-------SSCEEEE
T ss_pred CCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCC-------CCceeEE
Confidence 36789999999999888887777777999999996 899999988876655579999999987554 3689999
Q ss_pred EEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEe
Q 018352 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 110 ~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~ 146 (357)
++...+++.. .+.....+.++.++|||||+++...
T Consensus 121 vs~~~~~~~~--~~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 121 ISEPMGYMLF--NERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp EECCCBTTBT--TTSHHHHHHHGGGGEEEEEEEESCE
T ss_pred EEeCchhcCC--hHHHHHHHHHHHhhcCCCeEEEEec
Confidence 9987655522 2335567788999999999998553
No 126
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.44 E-value=1.2e-12 Score=126.88 Aligned_cols=107 Identities=19% Similarity=0.144 Sum_probs=89.3
Q ss_pred CCCCEEEEECCCCChhHHHHHHhc-CCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~-~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
.++.+|||||||+|..+..++... ..+++++|+ +.+++.|+++....+...+++|+.+|+.. .+ + ..||+
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~------~-~~~D~ 251 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PL------P-VTADV 251 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CC------S-CCEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cC------C-CCCCE
Confidence 467899999999998888887763 469999999 99999999998776554479999999875 33 2 34999
Q ss_pred EEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeC
Q 018352 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~p 147 (357)
|+|..++|+ + +.+....++++++++|+|||++++..+
T Consensus 252 v~~~~vl~~-~-~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 252 VLLSFVLLN-W-SDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEEESCGGG-S-CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEEeccccC-C-CHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 999999998 5 455567899999999999999998765
No 127
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.44 E-value=7.3e-13 Score=127.56 Aligned_cols=107 Identities=26% Similarity=0.253 Sum_probs=89.8
Q ss_pred CCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEEE
Q 018352 32 YVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (357)
Q Consensus 32 ~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~ 110 (357)
+.+|||||||+|..+..+++. +..+++++|+ +.+++.|+++........+++|+.+|+...... ..+.||+|+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-----~~~~~D~v~ 253 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNF-----EGGAADVVM 253 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGG-----TTCCEEEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCccc-----CCCCccEEE
Confidence 789999999999988888776 4569999999 889999999887665555799999999775410 135699999
Q ss_pred EccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEe
Q 018352 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 111 ~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~ 146 (357)
|..++|+ + +.++...++++++++|+|||++++..
T Consensus 254 ~~~vlh~-~-~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (352)
T 3mcz_A 254 LNDCLHY-F-DAREAREVIGHAAGLVKPGGALLILT 287 (352)
T ss_dssp EESCGGG-S-CHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred Eeccccc-C-CHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 9999998 5 56668899999999999999999873
No 128
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.43 E-value=4.7e-13 Score=123.85 Aligned_cols=104 Identities=21% Similarity=0.154 Sum_probs=84.1
Q ss_pred HHcCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCc
Q 018352 26 KIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQ 105 (357)
Q Consensus 26 ~~~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~ 105 (357)
..+..++.+|||+|||+|..+..+++.+. +|+|+|+|+.+++.|+++.+.++.. +.+.++|+... + +.++
T Consensus 115 ~~~~~~~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d~~~~-~------~~~~ 184 (254)
T 2nxc_A 115 ARHLRPGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAKRNGVR--PRFLEGSLEAA-L------PFGP 184 (254)
T ss_dssp HHHCCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHHHTTCC--CEEEESCHHHH-G------GGCC
T ss_pred HHhcCCCCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChhhc-C------cCCC
Confidence 34467789999999999988887777666 9999999999999999998876443 78888886441 2 2468
Q ss_pred ccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEe
Q 018352 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 106 FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~ 146 (357)
||+|+++...|. ...++.++.++|+|||+++++.
T Consensus 185 fD~Vv~n~~~~~-------~~~~l~~~~~~LkpgG~lils~ 218 (254)
T 2nxc_A 185 FDLLVANLYAEL-------HAALAPRYREALVPGGRALLTG 218 (254)
T ss_dssp EEEEEEECCHHH-------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCEEEECCcHHH-------HHHHHHHHHHHcCCCCEEEEEe
Confidence 999998765443 5688999999999999999874
No 129
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.42 E-value=2.9e-12 Score=124.01 Aligned_cols=113 Identities=13% Similarity=0.068 Sum_probs=92.1
Q ss_pred HHHHHc-CCCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhh
Q 018352 23 ALIKIY-SHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQ 100 (357)
Q Consensus 23 ~Li~~~-~~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~ 100 (357)
.++..+ ..++.+|||||||+|..+..++.. +..+++|+|+ +.+++.|+++.+..+...+++|+.+|+...++
T Consensus 181 ~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----- 254 (359)
T 1x19_A 181 LLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESY----- 254 (359)
T ss_dssp HHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCC-----
T ss_pred HHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCC-----
Confidence 444444 346789999999999988888776 3569999999 99999999998766544469999999987654
Q ss_pred hcCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEe
Q 018352 101 EKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 101 ~~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~ 146 (357)
..+|+|++..++|+ + +.++..++|++++++|||||++++..
T Consensus 255 ---~~~D~v~~~~vlh~-~-~d~~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 255 ---PEADAVLFCRILYS-A-NEQLSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp ---CCCSEEEEESCGGG-S-CHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred ---CCCCEEEEechhcc-C-CHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 23499999999998 5 45668899999999999999998774
No 130
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.42 E-value=1.2e-12 Score=118.06 Aligned_cols=120 Identities=12% Similarity=0.058 Sum_probs=87.8
Q ss_pred CCCEEEEECCCCChhHHHHHHh--cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh--cCCcc
Q 018352 31 PYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KANQA 106 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~--~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~--~~~~F 106 (357)
++.+|||||||+|..+..++.. ...+|+|+|+|+.+++.|+++++..+...+++++++|+... ...+.. ..++|
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--l~~~~~~~~~~~f 135 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDL--IPQLKKKYDVDTL 135 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHH--GGGTTTTSCCCCC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHH--HHHHHHhcCCCce
Confidence 5689999999999888887764 35799999999999999999988766555799999997431 111110 12689
Q ss_pred cEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeC---CchHHHHHHH
Q 018352 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP---DSSTIWAKYQ 157 (357)
Q Consensus 107 DlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~p---d~~~i~~~~~ 157 (357)
|+|++....++ ......++..+ ++|||||++++... ....+++.++
T Consensus 136 D~V~~d~~~~~----~~~~~~~~~~~-~~LkpgG~lv~~~~~~~~~~~~~~~l~ 184 (221)
T 3u81_A 136 DMVFLDHWKDR----YLPDTLLLEKC-GLLRKGTVLLADNVIVPGTPDFLAYVR 184 (221)
T ss_dssp SEEEECSCGGG----HHHHHHHHHHT-TCCCTTCEEEESCCCCCCCHHHHHHHH
T ss_pred EEEEEcCCccc----chHHHHHHHhc-cccCCCeEEEEeCCCCcchHHHHHHHh
Confidence 99999876655 23445677777 99999999998733 3344444443
No 131
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.42 E-value=5.7e-13 Score=128.55 Aligned_cols=117 Identities=19% Similarity=0.229 Sum_probs=92.0
Q ss_pred HHHHHc-CCCCCEEEEECCCCChhHHHHHHhc-CCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhh
Q 018352 23 ALIKIY-SHPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQ 100 (357)
Q Consensus 23 ~Li~~~-~~~~~~VLDlGCG~G~~l~k~~~~~-~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~ 100 (357)
.++..+ ..++.+|||+|||+|..+..++... ..+|+|+|+|+.|++.|+++....+. ...++.+|+...
T Consensus 187 ~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~--~~~~~~~d~~~~------- 257 (343)
T 2pjd_A 187 LLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGV--EGEVFASNVFSE------- 257 (343)
T ss_dssp HHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTC--CCEEEECSTTTT-------
T ss_pred HHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC--CCEEEEcccccc-------
Confidence 344444 2356799999999998888877764 35999999999999999999877643 467788988652
Q ss_pred hcCCcccEEEEccchhhcc-CCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 101 EKANQADLVCCFQHLQMCF-ETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 101 ~~~~~FDlV~~~~~lh~~f-es~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
..++||+|+|+..+|+.. .+.+...++++++.++|||||.+++..++.
T Consensus 258 -~~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 306 (343)
T 2pjd_A 258 -VKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAF 306 (343)
T ss_dssp -CCSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEETT
T ss_pred -ccCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCC
Confidence 246899999999888522 134567899999999999999999987665
No 132
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.42 E-value=1.9e-13 Score=123.64 Aligned_cols=97 Identities=18% Similarity=0.239 Sum_probs=78.2
Q ss_pred HHHHcCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCC-CCchhhhhhhc
Q 018352 24 LIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPC-AENFETQMQEK 102 (357)
Q Consensus 24 Li~~~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~-~~~~~~~l~~~ 102 (357)
++..+..++.+|||+|||+|..+..++..+ .+|+|+|+|+.+++.|+++.. +++|+++|+. ..++ .
T Consensus 41 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~------~~~~~~~d~~~~~~~------~ 107 (226)
T 3m33_A 41 WLSRLLTPQTRVLEAGCGHGPDAARFGPQA-ARWAAYDFSPELLKLARANAP------HADVYEWNGKGELPA------G 107 (226)
T ss_dssp HHHHHCCTTCEEEEESCTTSHHHHHHGGGS-SEEEEEESCHHHHHHHHHHCT------TSEEEECCSCSSCCT------T
T ss_pred HHHhcCCCCCeEEEeCCCCCHHHHHHHHcC-CEEEEEECCHHHHHHHHHhCC------CceEEEcchhhccCC------c
Confidence 344455788999999999998888777664 599999999999999998822 6899999984 3333 3
Q ss_pred -CCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEE
Q 018352 103 -ANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFL 143 (357)
Q Consensus 103 -~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi 143 (357)
+++||+|+|.. +...+++++.++|||||+++
T Consensus 108 ~~~~fD~v~~~~----------~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 108 LGAPFGLIVSRR----------GPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp CCCCEEEEEEES----------CCSGGGGGHHHHEEEEEEEE
T ss_pred CCCCEEEEEeCC----------CHHHHHHHHHHHcCCCcEEE
Confidence 57999999863 24467899999999999999
No 133
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.41 E-value=1.1e-12 Score=119.16 Aligned_cols=107 Identities=12% Similarity=0.053 Sum_probs=83.2
Q ss_pred CCCCCEEEEECCCCChhHHHHHHh--cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcc
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~--~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~F 106 (357)
+.++.+|||+|||+|..+..++.. +..+++|+|+|+.|++.+.+..+.+ .+++|+++|+..... ++...++|
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~---~~v~~~~~d~~~~~~---~~~~~~~~ 148 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR---TNIIPVIEDARHPHK---YRMLIAMV 148 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC---TTEEEECSCTTCGGG---GGGGCCCE
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc---CCeEEEEcccCChhh---hcccCCcE
Confidence 346889999999999988888776 3469999999999988888777654 278999999976321 11135789
Q ss_pred cEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeC
Q 018352 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (357)
Q Consensus 107 DlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~p 147 (357)
|+|+|... ..+..+.++.++.++|||||++++.+.
T Consensus 149 D~V~~~~~------~~~~~~~~~~~~~~~LkpgG~l~i~~~ 183 (233)
T 2ipx_A 149 DVIFADVA------QPDQTRIVALNAHTFLRNGGHFVISIK 183 (233)
T ss_dssp EEEEECCC------CTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEEcCC------CccHHHHHHHHHHHHcCCCeEEEEEEc
Confidence 99998653 234456789999999999999998744
No 134
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.41 E-value=1.9e-12 Score=115.50 Aligned_cols=104 Identities=13% Similarity=0.007 Sum_probs=83.4
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhcC--CeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcc
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETALI--ANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~~--~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~F 106 (357)
..++.+|||+|||+|..+..++.... .+|+|+|+|+.+++.|+++....+.. ++.+..+|+..... ..++|
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~------~~~~f 147 (215)
T 2yxe_A 75 LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYD-NVIVIVGDGTLGYE------PLAPY 147 (215)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEESCGGGCCG------GGCCE
T ss_pred CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CeEEEECCcccCCC------CCCCe
Confidence 35788999999999988888777642 69999999999999999988765432 58899999743211 24689
Q ss_pred cEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 107 DlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
|+|++..++|+.. .++.++|||||++++.+++.
T Consensus 148 D~v~~~~~~~~~~----------~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 148 DRIYTTAAGPKIP----------EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp EEEEESSBBSSCC----------HHHHHTEEEEEEEEEEESSS
T ss_pred eEEEECCchHHHH----------HHHHHHcCCCcEEEEEECCC
Confidence 9999999998832 47889999999999998764
No 135
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.41 E-value=1.3e-12 Score=127.82 Aligned_cols=113 Identities=17% Similarity=0.143 Sum_probs=88.2
Q ss_pred CCCEEEEECCCCChhHHHHHHhc-CCeEEEEeCChHHHHHHHHHhHhcCCC--ceeEEEEcCCCCCchhhhhhhcCCccc
Q 018352 31 PYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKN--FIAEFFEADPCAENFETQMQEKANQAD 107 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~~-~~~v~GiDiS~~~l~~A~~r~~~~~~~--~~v~f~~~D~~~~~~~~~l~~~~~~FD 107 (357)
++.+|||+|||+|..+..++... ..+|+|+|+|+.|++.|+++++.++.. .+++|+.+|+.. .+ ..++||
T Consensus 222 ~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-~~------~~~~fD 294 (375)
T 4dcm_A 222 LEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-GV------EPFRFN 294 (375)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-TC------CTTCEE
T ss_pred CCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-cC------CCCCee
Confidence 45899999999999988888774 679999999999999999998776432 258899999876 23 357899
Q ss_pred EEEEccchhhcc-CCHHHHHHHHHHHHhcccCCcEEEEEeCCch
Q 018352 108 LVCCFQHLQMCF-ETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (357)
Q Consensus 108 lV~~~~~lh~~f-es~~~~~~~L~~i~~~LkpGG~fi~t~pd~~ 150 (357)
+|+|+..+|... .......++++++.++|||||++++......
T Consensus 295 ~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~ 338 (375)
T 4dcm_A 295 AVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHL 338 (375)
T ss_dssp EEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEETTS
T ss_pred EEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECCc
Confidence 999998888521 0122345789999999999999999865553
No 136
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.41 E-value=6.4e-13 Score=121.37 Aligned_cols=104 Identities=17% Similarity=0.151 Sum_probs=81.5
Q ss_pred CCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEE
Q 018352 31 PYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
++.+|||||||+|..+..++.. +..+|+|+|+|+.|++.|+++.+..+.. +++++++|+....+.. ...++||+|
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~---~~~~~fD~V 145 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLE-NTTFCHDRAETFGQRK---DVRESYDIV 145 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEESCHHHHTTCT---TTTTCEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEeccHHHhcccc---cccCCccEE
Confidence 5789999999999888777654 5569999999999999999988776543 5899999975432200 014789999
Q ss_pred EEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEe
Q 018352 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 110 ~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~ 146 (357)
+|.. +. +...+++++.++|+|||+|++..
T Consensus 146 ~~~~-----~~---~~~~~l~~~~~~LkpgG~l~~~~ 174 (240)
T 1xdz_A 146 TARA-----VA---RLSVLSELCLPLVKKNGLFVALK 174 (240)
T ss_dssp EEEC-----CS---CHHHHHHHHGGGEEEEEEEEEEE
T ss_pred EEec-----cC---CHHHHHHHHHHhcCCCCEEEEEe
Confidence 9866 22 25688999999999999998873
No 137
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.41 E-value=1.9e-12 Score=123.76 Aligned_cols=103 Identities=18% Similarity=0.158 Sum_probs=86.9
Q ss_pred CEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEEEE
Q 018352 33 VTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVCC 111 (357)
Q Consensus 33 ~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~~ 111 (357)
.+|||+|||+|..+..++.. +..+++++|+ +.+++.|+++....+...+++|+.+|+.. ++ +++||+|++
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~-------~~~~D~v~~ 239 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EV-------PSNGDIYLL 239 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CC-------CSSCSEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CC-------CCCCCEEEE
Confidence 89999999999888888776 4568999999 99999999987654333379999999876 33 267999999
Q ss_pred ccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEe
Q 018352 112 FQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 112 ~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~ 146 (357)
..++|+ + +.++..+++++++++|+|||++++..
T Consensus 240 ~~vl~~-~-~~~~~~~~l~~~~~~L~pgG~l~i~e 272 (334)
T 2ip2_A 240 SRIIGD-L-DEAASLRLLGNCREAMAGDGRVVVIE 272 (334)
T ss_dssp ESCGGG-C-CHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred chhccC-C-CHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 999998 5 56667899999999999999999884
No 138
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.40 E-value=6.9e-14 Score=127.31 Aligned_cols=103 Identities=20% Similarity=0.175 Sum_probs=83.5
Q ss_pred CCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEEE
Q 018352 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~ 110 (357)
++.+|||+|||+|..+..++..+ .+|+|+|+|+.|++.|+++++..+...+++|+++|+.... ..++||+|+
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-------~~~~~D~v~ 149 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG-MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-------SFLKADVVF 149 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-------GGCCCSEEE
T ss_pred CCCEEEECccccCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-------ccCCCCEEE
Confidence 67899999999999988888766 6999999999999999999887654447999999985532 247899999
Q ss_pred EccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 111 ~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
+...+|+ +. .....+.+++++|+|||++++.
T Consensus 150 ~~~~~~~-~~---~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 150 LSPPWGG-PD---YATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp ECCCCSS-GG---GGGSSSBCTTTSCSSCHHHHHH
T ss_pred ECCCcCC-cc---hhhhHHHHHHhhcCCcceeHHH
Confidence 9988877 32 2333677899999999986543
No 139
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.40 E-value=4.2e-13 Score=122.20 Aligned_cols=119 Identities=24% Similarity=0.160 Sum_probs=80.0
Q ss_pred HHHHHHHcCCCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCC-hHHHHHH---HHHhHhcCCCceeEEEEcCCCCCch
Q 018352 21 KTALIKIYSHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVA-TSGIGEA---RDTWENQRKNFIAEFFEADPCAENF 95 (357)
Q Consensus 21 ks~Li~~~~~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS-~~~l~~A---~~r~~~~~~~~~v~f~~~D~~~~~~ 95 (357)
...++..+..++.+|||||||+|..+..++.. +..+|+|+|+| +.|++.| +++....+. .++.|.++|+...+.
T Consensus 14 ~~~~~~~~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~-~~v~~~~~d~~~l~~ 92 (225)
T 3p2e_A 14 KDELTEIIGQFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGL-SNVVFVIAAAESLPF 92 (225)
T ss_dssp HHHHHHHHTTCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCC-SSEEEECCBTTBCCG
T ss_pred HHHHHHHhCCCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCC-CCeEEEEcCHHHhhh
Confidence 34445555678889999999999888887754 45689999999 7777776 665544432 268999999876532
Q ss_pred hhhhhhcCCcccEEEEccchhhccCC-HHHHHHHHHHHHhcccCCcEEEEE
Q 018352 96 ETQMQEKANQADLVCCFQHLQMCFET-EERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 96 ~~~l~~~~~~FDlV~~~~~lh~~fes-~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
. ....+|.|.+.+........ ......++++++++|||||+|++.
T Consensus 93 ~-----~~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~ 138 (225)
T 3p2e_A 93 E-----LKNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFV 138 (225)
T ss_dssp G-----GTTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEE
T ss_pred h-----ccCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEE
Confidence 1 12445555554432210000 011246899999999999999984
No 140
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.39 E-value=1.4e-12 Score=118.80 Aligned_cols=104 Identities=10% Similarity=0.074 Sum_probs=82.8
Q ss_pred CCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEE
Q 018352 31 PYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
++.+|||||||+|..+..++.. +..+|+|+|+|+.+++.|+++++..+...+++|+++|+..... .. ..++||+|
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~---~~~~fD~V 146 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFE-NV---NDKVYDMI 146 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHH-HH---TTSCEEEE
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHH-hh---ccCCccEE
Confidence 5689999999999888777664 4679999999999999999999876554579999999865311 01 25789999
Q ss_pred EEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 110 ~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
++..... ....+++.+.++|||||++++.
T Consensus 147 ~~~~~~~-------~~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 147 FIDAAKA-------QSKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp EEETTSS-------SHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEcCcHH-------HHHHHHHHHHHhcCCCeEEEEe
Confidence 9765322 2556899999999999999885
No 141
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.39 E-value=1.8e-12 Score=116.75 Aligned_cols=105 Identities=15% Similarity=0.125 Sum_probs=83.2
Q ss_pred CCCCCEEEEECCCCChhHHHHHHh-c-CCeEEEEeCChHHHHHHHHHhHhcCC----CceeEEEEcCCCCCchhhhhhhc
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETA-L-IANYIGIDVATSGIGEARDTWENQRK----NFIAEFFEADPCAENFETQMQEK 102 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~-~-~~~v~GiDiS~~~l~~A~~r~~~~~~----~~~v~f~~~D~~~~~~~~~l~~~ 102 (357)
..++.+|||+|||+|..+..++.. + ..+|+|+|+|+.+++.|+++....+. ..++.++++|+..... .
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~------~ 148 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYA------E 148 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCG------G
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcc------c
Confidence 557889999999999888877765 3 25999999999999999998875421 2268999999864332 2
Q ss_pred CCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 103 ANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 103 ~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
.++||+|++...++.+ ++++.++|||||+++++++..
T Consensus 149 ~~~fD~i~~~~~~~~~----------~~~~~~~LkpgG~lv~~~~~~ 185 (226)
T 1i1n_A 149 EAPYDAIHVGAAAPVV----------PQALIDQLKPGGRLILPVGPA 185 (226)
T ss_dssp GCCEEEEEECSBBSSC----------CHHHHHTEEEEEEEEEEESCT
T ss_pred CCCcCEEEECCchHHH----------HHHHHHhcCCCcEEEEEEecC
Confidence 4689999998877662 367889999999999987653
No 142
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.39 E-value=4.7e-12 Score=112.18 Aligned_cols=101 Identities=13% Similarity=0.029 Sum_probs=82.1
Q ss_pred CCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEE
Q 018352 31 PYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
++.+|||+|||+|..+..++.. +..+++|+|+|+.+++.|+++.+..+.. ++.++++|+.... +.++||+|
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~-------~~~~~D~i 136 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLE-NIEPVQSRVEEFP-------SEPPFDGV 136 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCS-SEEEEECCTTTSC-------CCSCEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CeEEEecchhhCC-------ccCCcCEE
Confidence 4689999999999988888775 4679999999999999999988765443 4899999987643 24689999
Q ss_pred EEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeC
Q 018352 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (357)
Q Consensus 110 ~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~p 147 (357)
+|.. +. ....+++++.++|+|||++++...
T Consensus 137 ~~~~-----~~---~~~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 137 ISRA-----FA---SLNDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp ECSC-----SS---SHHHHHHHHTTSEEEEEEEEEEES
T ss_pred EEec-----cC---CHHHHHHHHHHhcCCCcEEEEEeC
Confidence 9754 22 245889999999999999998853
No 143
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.39 E-value=1.3e-13 Score=122.05 Aligned_cols=115 Identities=15% Similarity=0.050 Sum_probs=67.1
Q ss_pred CCCCEEEEECCCCChhHHHHHHhc-CCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~-~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
.++.+|||+|||+|..+..++... ..+++|+|+|+.+++.|+++....+. +++++++|+.. .+.. .....++||+
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~-~~~~-~~~~~~~fD~ 104 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA--VVDWAAADGIE-WLIE-RAERGRPWHA 104 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC---------------------CCHHHHHH-HHHH-HHHTTCCBSE
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC--ceEEEEcchHh-hhhh-hhhccCcccE
Confidence 567899999999999888887774 45999999999999999998876543 67788888755 3311 0012378999
Q ss_pred EEEccchhhcc-----CC-----------------HHHHHHHHHHHHhcccCCcE-EEEEeCC
Q 018352 109 VCCFQHLQMCF-----ET-----------------EERARRLLQNVSSLLKPGGY-FLGITPD 148 (357)
Q Consensus 109 V~~~~~lh~~f-----es-----------------~~~~~~~L~~i~~~LkpGG~-fi~t~pd 148 (357)
|+|+..++..- .. .+....+++++.++|||||+ +++.++.
T Consensus 105 i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 167 (215)
T 4dzr_A 105 IVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGH 167 (215)
T ss_dssp EEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTT
T ss_pred EEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECC
Confidence 99975443210 00 01127889999999999999 5555543
No 144
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.39 E-value=3.2e-12 Score=123.40 Aligned_cols=108 Identities=19% Similarity=0.171 Sum_probs=89.3
Q ss_pred CCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
.++.+|||||||+|..+..++.. +..+++++|+ +.+++.|+++....+...+++|+.+|+.. .+ + ..||+
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~------~-~~~D~ 252 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PL------P-RKADA 252 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CC------S-SCEEE
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CC------C-CCccE
Confidence 46789999999999888888776 3458999999 99999999998776544479999999875 33 2 34999
Q ss_pred EEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCC
Q 018352 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
|++..++|+ + ..++..+++++++++|+|||++++..+.
T Consensus 253 v~~~~vl~~-~-~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 253 IILSFVLLN-W-PDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp EEEESCGGG-S-CHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEEcccccC-C-CHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 999999998 5 4556678999999999999999988554
No 145
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.39 E-value=3.4e-12 Score=123.49 Aligned_cols=116 Identities=18% Similarity=0.155 Sum_probs=91.4
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhc--CCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcc
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETAL--IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~--~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~F 106 (357)
..++.+|||+|||+|..+..++... ..+++|+|+|+.|++.|+++.+..+.. +++|.++|+...+. ....|
T Consensus 201 ~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~-~i~~~~~D~~~~~~------~~~~~ 273 (354)
T 3tma_A 201 ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS-WIRFLRADARHLPR------FFPEV 273 (354)
T ss_dssp CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT-TCEEEECCGGGGGG------TCCCC
T ss_pred CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeCChhhCcc------ccCCC
Confidence 3467899999999999888877753 469999999999999999999877655 78999999876443 34679
Q ss_pred cEEEEccchhhccCC----HHHHHHHHHHHHhcccCCcEEEEEeCCchH
Q 018352 107 DLVCCFQHLQMCFET----EERARRLLQNVSSLLKPGGYFLGITPDSST 151 (357)
Q Consensus 107 DlV~~~~~lh~~fes----~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~ 151 (357)
|+|+|+..++....+ ......+++++.++|||||.+++.+++...
T Consensus 274 D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~~~ 322 (354)
T 3tma_A 274 DRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRPAL 322 (354)
T ss_dssp SEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCHHH
T ss_pred CEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCHHH
Confidence 999997654432211 223478999999999999999999998654
No 146
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.39 E-value=7e-13 Score=118.79 Aligned_cols=111 Identities=13% Similarity=0.030 Sum_probs=78.4
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhc-CCeEEEEeCChHHHHHHHHHhHh---cCCCceeEEEEcCCCCCchhhhhhhcCC
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWEN---QRKNFIAEFFEADPCAENFETQMQEKAN 104 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~-~~~v~GiDiS~~~l~~A~~r~~~---~~~~~~v~f~~~D~~~~~~~~~l~~~~~ 104 (357)
..++.+|||+|||+|..+..++... ..+|+|+|+|+.||+.+.++.+. .....++.|+++|+...++ ..+
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~------~~~ 98 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPP------LSG 98 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCS------CCC
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCC------CCC
Confidence 4578899999999999888887763 56999999999999965443322 1112278999999988665 345
Q ss_pred cccEEEEccchhhcc-CCHHHHHHHHHHHHhcccCCcEEEEEe
Q 018352 105 QADLVCCFQHLQMCF-ETEERARRLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 105 ~FDlV~~~~~lh~~f-es~~~~~~~L~~i~~~LkpGG~fi~t~ 146 (357)
. |.|.+.+..+... .+..+...++++++++|||||+|+++.
T Consensus 99 ~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 99 V-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp E-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEE
T ss_pred C-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEe
Confidence 5 7766433211100 011223688999999999999999864
No 147
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.38 E-value=7e-12 Score=116.91 Aligned_cols=111 Identities=14% Similarity=0.122 Sum_probs=86.6
Q ss_pred CCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
.++.+|||+|||+|..+..++.. +..+|+|+|+|+.+++.|+++.+..+.. ++.|+++|+... + ..++||+
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~-~v~~~~~d~~~~-~------~~~~fD~ 179 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFSA-L------AGQQFAM 179 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCSTTGG-G------TTCCEEE
T ss_pred cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEEcchhhh-c------ccCCccE
Confidence 46789999999999988888755 4669999999999999999998766443 689999998652 2 2478999
Q ss_pred EEEccchhhc-----------cCC----------HHHHHHHHHHHHhcccCCcEEEEEeCC
Q 018352 109 VCCFQHLQMC-----------FET----------EERARRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 109 V~~~~~lh~~-----------fes----------~~~~~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
|+++..++.. ++. .+..+.+++++.++|+|||++++..+.
T Consensus 180 Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~ 240 (276)
T 2b3t_A 180 IVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGW 240 (276)
T ss_dssp EEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCS
T ss_pred EEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECc
Confidence 9998543321 011 145688999999999999999988543
No 148
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.38 E-value=2.2e-12 Score=116.26 Aligned_cols=108 Identities=11% Similarity=0.032 Sum_probs=83.4
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhcC------CeEEEEeCChHHHHHHHHHhHhcCC----CceeEEEEcCCCCCchhhh
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETALI------ANYIGIDVATSGIGEARDTWENQRK----NFIAEFFEADPCAENFETQ 98 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~~------~~v~GiDiS~~~l~~A~~r~~~~~~----~~~v~f~~~D~~~~~~~~~ 98 (357)
..++.+|||+|||+|..+..++.... .+|+|+|+|+.+++.|+++.+..+. ..++.++.+|+........
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 157 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEK 157 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHH
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccC
Confidence 56788999999999988877776532 5999999999999999999876531 2368999999876430000
Q ss_pred hhhcCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCC
Q 018352 99 MQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 99 l~~~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
. ..++||+|++..++|.+ ++++.++|+|||++++.++.
T Consensus 158 ~--~~~~fD~I~~~~~~~~~----------~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 158 K--ELGLFDAIHVGASASEL----------PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp H--HHCCEEEEEECSBBSSC----------CHHHHHHEEEEEEEEEEEEE
T ss_pred c--cCCCcCEEEECCchHHH----------HHHHHHhcCCCcEEEEEEcc
Confidence 0 24689999999887762 47788999999999998764
No 149
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.38 E-value=2.5e-12 Score=126.27 Aligned_cols=123 Identities=11% Similarity=0.068 Sum_probs=92.8
Q ss_pred HHHcCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCc-eeEEEEcCCCCCchhhhhhhcC
Q 018352 25 IKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNF-IAEFFEADPCAENFETQMQEKA 103 (357)
Q Consensus 25 i~~~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~-~v~f~~~D~~~~~~~~~l~~~~ 103 (357)
+..++.++.+|||+|||+|..+..++..+..+|+|+|+|+.|++.|+++++.++... +++|+++|+.. +...+....
T Consensus 206 ~~~~~~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~--~l~~~~~~~ 283 (385)
T 2b78_A 206 LINGSAAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFD--YFKYARRHH 283 (385)
T ss_dssp HHHTTTBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHH--HHHHHHHTT
T ss_pred HHHHhcCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHH--HHHHHHHhC
Confidence 344435678999999999998888877677799999999999999999998776544 68999999854 111121124
Q ss_pred CcccEEEEccch-----hhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 104 NQADLVCCFQHL-----QMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 104 ~~FDlV~~~~~l-----h~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
.+||+|++.... +...........+++.+.++|+|||++++++...
T Consensus 284 ~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~ 334 (385)
T 2b78_A 284 LTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAA 334 (385)
T ss_dssp CCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 689999985432 2323345667788999999999999999886554
No 150
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.37 E-value=3.4e-12 Score=114.64 Aligned_cols=108 Identities=12% Similarity=0.039 Sum_probs=83.8
Q ss_pred CCCEEEEECCCCChhHHHHHHh-c-CCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhc-CCccc
Q 018352 31 PYVTVCDLYCGAGVDVDKWETA-L-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEK-ANQAD 107 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~-~-~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~-~~~FD 107 (357)
++.+|||||||+|..+..++.. + ..+|+|+|+++.+++.|+++++..+...+++++++|+.. ....+... .++||
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~~~~~~~~~~~fD 135 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALD--SLQQIENEKYEPFD 135 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHH--HHHHHHHTTCCCCS
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH--HHHHHHhcCCCCcC
Confidence 5689999999999888887766 2 569999999999999999998876555569999999754 11112111 26799
Q ss_pred EEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeC
Q 018352 108 LVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (357)
Q Consensus 108 lV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~p 147 (357)
+|++....+ ....+++++.++|+|||++++..+
T Consensus 136 ~v~~d~~~~-------~~~~~l~~~~~~L~pgG~lv~~~~ 168 (223)
T 3duw_A 136 FIFIDADKQ-------NNPAYFEWALKLSRPGTVIIGDNV 168 (223)
T ss_dssp EEEECSCGG-------GHHHHHHHHHHTCCTTCEEEEESC
T ss_pred EEEEcCCcH-------HHHHHHHHHHHhcCCCcEEEEeCC
Confidence 999876433 245789999999999999998743
No 151
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.37 E-value=2.5e-12 Score=118.37 Aligned_cols=107 Identities=9% Similarity=0.054 Sum_probs=83.3
Q ss_pred CCCEEEEECCCCChhHHHHHHh-c-CCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 31 PYVTVCDLYCGAGVDVDKWETA-L-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~-~-~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
++.+|||||||+|..+..++.. + ..+|+|+|+|+.+++.|+++++..+...+++++++|+... + ..+. ..++||+
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~-l-~~~~-~~~~fD~ 139 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQS-L-ESLG-ECPAFDL 139 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHH-H-HTCC-SCCCCSE
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH-H-HhcC-CCCCeEE
Confidence 5789999999999888877765 2 5799999999999999999998766555799999997541 1 1110 1358999
Q ss_pred EEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeC
Q 018352 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~p 147 (357)
|++.... .....+++++.++|||||++++...
T Consensus 140 V~~d~~~-------~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 140 IFIDADK-------PNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp EEECSCG-------GGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred EEECCch-------HHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 9986532 2345689999999999999998743
No 152
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.37 E-value=3.7e-12 Score=122.70 Aligned_cols=127 Identities=16% Similarity=0.108 Sum_probs=91.1
Q ss_pred HHHHHHHHHHcCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCc-eeEEEEcCCCCCchh
Q 018352 18 EFAKTALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNF-IAEFFEADPCAENFE 96 (357)
Q Consensus 18 nwvks~Li~~~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~-~v~f~~~D~~~~~~~ 96 (357)
.|+...+.. ..++.+|||+|||+|..+..++..+. +|+|+|+|+.+++.|+++.+.++... +++|+++|+....
T Consensus 142 ~~l~~~~~~--~~~~~~VLDlgcGtG~~sl~la~~ga-~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l-- 216 (332)
T 2igt_A 142 EWLKNAVET--ADRPLKVLNLFGYTGVASLVAAAAGA-EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFI-- 216 (332)
T ss_dssp HHHHHHHHH--SSSCCEEEEETCTTCHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHH--
T ss_pred HHHHHHHHh--cCCCCcEEEcccccCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHH--
Confidence 455444321 34678999999999999888887766 99999999999999999988765433 4899999975421
Q ss_pred hhhhhcCCcccEEEEccc---hh---hccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 97 TQMQEKANQADLVCCFQH---LQ---MCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 97 ~~l~~~~~~FDlV~~~~~---lh---~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
..+....++||+|++... .. ..+...+....+++++.++|+|||+|+++..+.
T Consensus 217 ~~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~ 275 (332)
T 2igt_A 217 QREERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYS 275 (332)
T ss_dssp HHHHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECC
T ss_pred HHHHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCC
Confidence 111112468999999432 11 012235567889999999999999988775443
No 153
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.37 E-value=4.4e-12 Score=119.45 Aligned_cols=111 Identities=15% Similarity=0.060 Sum_probs=84.2
Q ss_pred CCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcc---c
Q 018352 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA---D 107 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~F---D 107 (357)
++.+|||+|||+|..+..++..+..+|+|+|+|+.+++.|+++.+..+...+++|+++|+.. .+ .++| |
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~-~~-------~~~f~~~D 194 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLE-PF-------KEKFASIE 194 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTG-GG-------GGGTTTCC
T ss_pred CCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchh-hc-------ccccCCCC
Confidence 56799999999999888887765569999999999999999998876554469999999876 22 1468 9
Q ss_pred EEEEccchhhc---------cCCH------HHHHHHHHHHH-hcccCCcEEEEEeCCc
Q 018352 108 LVCCFQHLQMC---------FETE------ERARRLLQNVS-SLLKPGGYFLGITPDS 149 (357)
Q Consensus 108 lV~~~~~lh~~---------fes~------~~~~~~L~~i~-~~LkpGG~fi~t~pd~ 149 (357)
+|+|+...... ++.. .+...+++++. +.|+|||++++.+...
T Consensus 195 ~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~~ 252 (284)
T 1nv8_A 195 MILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGED 252 (284)
T ss_dssp EEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCTT
T ss_pred EEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECch
Confidence 99997321100 1111 11226899999 9999999999987654
No 154
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.36 E-value=6.1e-12 Score=115.33 Aligned_cols=108 Identities=16% Similarity=0.140 Sum_probs=87.9
Q ss_pred CCCCCEEEEECCCCChhHHHHHHh-c-CCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcc
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETA-L-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~-~-~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~F 106 (357)
..++.+|||+|||+|..+..++.. + ..+++|+|+|+.+++.|+++++..+...+++++++|+... + +.++|
T Consensus 91 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~------~~~~~ 163 (255)
T 3mb5_A 91 ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG-I------EEENV 163 (255)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC-C------CCCSE
T ss_pred CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc-c------CCCCc
Confidence 357889999999999988888776 3 6799999999999999999987765544599999998743 3 45789
Q ss_pred cEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCchHH
Q 018352 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTI 152 (357)
Q Consensus 107 DlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~i 152 (357)
|+|++... +...+++++.++|+|||++++..|+.+.+
T Consensus 164 D~v~~~~~---------~~~~~l~~~~~~L~~gG~l~~~~~~~~~~ 200 (255)
T 3mb5_A 164 DHVILDLP---------QPERVVEHAAKALKPGGFFVAYTPCSNQV 200 (255)
T ss_dssp EEEEECSS---------CGGGGHHHHHHHEEEEEEEEEEESSHHHH
T ss_pred CEEEECCC---------CHHHHHHHHHHHcCCCCEEEEEECCHHHH
Confidence 99988432 23467999999999999999998887543
No 155
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.36 E-value=2.4e-12 Score=118.02 Aligned_cols=114 Identities=17% Similarity=0.161 Sum_probs=83.1
Q ss_pred CCCEEEEECCCCChhHHHHHHhc-CCeEEEEeCChHHHHHHHHHhHhc--------CCCceeEEEEcCCCCCchhhhhhh
Q 018352 31 PYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQ--------RKNFIAEFFEADPCAENFETQMQE 101 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~~-~~~v~GiDiS~~~l~~A~~r~~~~--------~~~~~v~f~~~D~~~~~~~~~l~~ 101 (357)
++.+|||||||+|..+..++... ..+|+|+|+|+.+++.|+++.+.. +. .++.++++|+... +...+
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~-~nv~~~~~D~~~~-l~~~~-- 124 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGF-QNINVLRGNAMKF-LPNFF-- 124 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTT-TTEEEEECCTTSC-GGGTS--
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCC-CcEEEEeccHHHH-HHHhc--
Confidence 56799999999999998888775 458999999999999999887653 22 3799999998752 11111
Q ss_pred cCCcccEEEEccchhhccCCHHH-----HHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 102 KANQADLVCCFQHLQMCFETEER-----ARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 102 ~~~~FDlV~~~~~lh~~fes~~~-----~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
..+++|.|++.+.-.+ +..... ...+++++.++|+|||+|++.+...
T Consensus 125 ~~~~~d~v~~~~p~p~-~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~~ 176 (246)
T 2vdv_E 125 EKGQLSKMFFCFPDPH-FKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDVK 176 (246)
T ss_dssp CTTCEEEEEEESCCCC-------CSSCCCHHHHHHHHHHEEEEEEEEEEESCH
T ss_pred cccccCEEEEECCCcc-cccchhHHhhccHHHHHHHHHHcCCCCEEEEEeccH
Confidence 3578999986553222 111000 1478999999999999999977664
No 156
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.36 E-value=3.9e-12 Score=128.35 Aligned_cols=106 Identities=16% Similarity=0.091 Sum_probs=85.4
Q ss_pred CCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEE
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
.++.+|||||||+|..+..+++.+..+|+|+|+|+ +++.|+++.+.++...+++|+.+|+...++ .++||+|
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~-------~~~fD~I 228 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSL-------PEQVDII 228 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCC-------SSCEEEE
T ss_pred cCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCcc-------CCCeEEE
Confidence 36789999999999888877776677999999998 999999998877655579999999977544 3689999
Q ss_pred EEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 110 ~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
+|...+++ +.. +.....+.++.++|||||+++..
T Consensus 229 vs~~~~~~-~~~-e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 229 ISEPMGYM-LFN-ERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp ECCCCHHH-HTC-HHHHHHHHHGGGGEEEEEEEESC
T ss_pred EEeCchHh-cCc-HHHHHHHHHHHHhcCCCCEEEEE
Confidence 99776555 323 34556777999999999999854
No 157
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.36 E-value=3.9e-12 Score=108.46 Aligned_cols=109 Identities=19% Similarity=0.103 Sum_probs=81.1
Q ss_pred CCCCCEEEEECCCCChhHHHHHHh-c-CCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhh--hcCC
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETA-L-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQ--EKAN 104 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~-~-~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~--~~~~ 104 (357)
..++.+|||+|||+|..+..++.. + ..+++|+|+|+ +++. .++.++++|+...+....+. ..++
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-----------~~~~~~~~d~~~~~~~~~~~~~~~~~ 87 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-----------VGVDFLQGDFRDELVMKALLERVGDS 87 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-----------TTEEEEESCTTSHHHHHHHHHHHTTC
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-----------CcEEEEEcccccchhhhhhhccCCCC
Confidence 457889999999999888888776 3 37999999999 7532 26889999997754111111 1357
Q ss_pred cccEEEEccchhhccCCH--HH------HHHHHHHHHhcccCCcEEEEEeCCch
Q 018352 105 QADLVCCFQHLQMCFETE--ER------ARRLLQNVSSLLKPGGYFLGITPDSS 150 (357)
Q Consensus 105 ~FDlV~~~~~lh~~fes~--~~------~~~~L~~i~~~LkpGG~fi~t~pd~~ 150 (357)
+||+|++...+|+ +... +. ...+++++.++|+|||.++++++...
T Consensus 88 ~~D~i~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 140 (180)
T 1ej0_A 88 KVQVVMSDMAPNM-SGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGE 140 (180)
T ss_dssp CEEEEEECCCCCC-CSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESST
T ss_pred ceeEEEECCCccc-cCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCC
Confidence 8999999888776 3232 11 16899999999999999999876553
No 158
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.36 E-value=3e-12 Score=117.13 Aligned_cols=109 Identities=13% Similarity=0.072 Sum_probs=88.0
Q ss_pred CCCCCEEEEECCCCChhHHHHHHh-c-CCeEEEEeCChHHHHHHHHHhHhc-CCCceeEEEEcCCCCCchhhhhhhcCCc
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETA-L-IANYIGIDVATSGIGEARDTWENQ-RKNFIAEFFEADPCAENFETQMQEKANQ 105 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~-~-~~~v~GiDiS~~~l~~A~~r~~~~-~~~~~v~f~~~D~~~~~~~~~l~~~~~~ 105 (357)
..++.+|||+|||+|..+..++.. + ..+++|+|+|+.+++.|+++++.. + ..++.+.++|+...++ +.++
T Consensus 94 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g-~~~v~~~~~d~~~~~~------~~~~ 166 (258)
T 2pwy_A 94 LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ-VENVRFHLGKLEEAEL------EEAA 166 (258)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-CCCEEEEESCGGGCCC------CTTC
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC-CCCEEEEECchhhcCC------CCCC
Confidence 357889999999999888888776 3 579999999999999999988765 3 3378999999876544 3578
Q ss_pred ccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCchHHH
Q 018352 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIW 153 (357)
Q Consensus 106 FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~i~ 153 (357)
||+|++.. . +...+++++.++|+|||++++..|+.+.+.
T Consensus 167 ~D~v~~~~------~---~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~ 205 (258)
T 2pwy_A 167 YDGVALDL------M---EPWKVLEKAALALKPDRFLVAYLPNITQVL 205 (258)
T ss_dssp EEEEEEES------S---CGGGGHHHHHHHEEEEEEEEEEESCHHHHH
T ss_pred cCEEEECC------c---CHHHHHHHHHHhCCCCCEEEEEeCCHHHHH
Confidence 99998732 1 234679999999999999999999875543
No 159
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.35 E-value=4.4e-12 Score=114.37 Aligned_cols=106 Identities=17% Similarity=0.102 Sum_probs=81.9
Q ss_pred CCCCCEEEEECCCCChhHHHHHHh-c-CCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcc
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETA-L-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~-~-~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~F 106 (357)
..++.+|||+|||+|..+..++.. + ..+|+|+|+|+.|++.++++.+.. .++.++++|+........ ..++|
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~---~~v~~~~~d~~~~~~~~~---~~~~~ 144 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER---RNIVPILGDATKPEEYRA---LVPKV 144 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC---TTEEEEECCTTCGGGGTT---TCCCE
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc---CCCEEEEccCCCcchhhc---ccCCc
Confidence 346789999999999888888765 2 469999999999999998887654 378999999876321111 23589
Q ss_pred cEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEe
Q 018352 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 107 DlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~ 146 (357)
|+|++... .......+++++.++|||||++++..
T Consensus 145 D~v~~~~~------~~~~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 145 DVIFEDVA------QPTQAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp EEEEECCC------STTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEECCC------CHhHHHHHHHHHHHhcCCCCEEEEEE
Confidence 99998653 22345567999999999999999873
No 160
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.35 E-value=1.3e-12 Score=118.62 Aligned_cols=103 Identities=14% Similarity=0.078 Sum_probs=81.4
Q ss_pred CCEEEEECCCCChhHHHHHHh--cCCeEEEEeCChHHHHHHHHHhHhcCCC-ceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 32 YVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKN-FIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 32 ~~~VLDlGCG~G~~l~k~~~~--~~~~v~GiDiS~~~l~~A~~r~~~~~~~-~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
+.+|||||||+|..+..++.. +.++|+++|+|+.+++.|+++++..+.. .+++++++|+.... ..+ ..++||+
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l--~~~--~~~~fD~ 132 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVM--SRL--ANDSYQL 132 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHG--GGS--CTTCEEE
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHH--HHh--cCCCcCe
Confidence 459999999999888877775 3579999999999999999999876655 57999999875421 111 2578999
Q ss_pred EEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
|++....+ ....+++.+.++|||||++++.
T Consensus 133 V~~d~~~~-------~~~~~l~~~~~~LkpGG~lv~d 162 (221)
T 3dr5_A 133 VFGQVSPM-------DLKALVDAAWPLLRRGGALVLA 162 (221)
T ss_dssp EEECCCTT-------THHHHHHHHHHHEEEEEEEEET
T ss_pred EEEcCcHH-------HHHHHHHHHHHHcCCCcEEEEe
Confidence 99876332 2456899999999999999985
No 161
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.35 E-value=1.9e-12 Score=126.62 Aligned_cols=104 Identities=16% Similarity=0.070 Sum_probs=84.5
Q ss_pred CCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEEE
Q 018352 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~ 110 (357)
++.+|||||||+|......++++..+|+|+|.|+ |++.|++..+.++...+++++++|+....+ +++||+|+
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~l-------pe~~Dviv 154 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVEL-------PEQVDAIV 154 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCC-------SSCEEEEE
T ss_pred CCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecC-------CccccEEE
Confidence 6789999999999666666667888999999996 889999998888777789999999988665 47899999
Q ss_pred EccchhhccCCHHHHHHHHHHHHhcccCCcEEE
Q 018352 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFL 143 (357)
Q Consensus 111 ~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi 143 (357)
|-..-+. +..+.....++....++|||||.++
T Consensus 155 sE~~~~~-l~~e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 155 SEWMGYG-LLHESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp CCCCBTT-BTTTCSHHHHHHHHHHHEEEEEEEE
T ss_pred eeccccc-ccccchhhhHHHHHHhhCCCCceEC
Confidence 8543222 3345567788888999999999886
No 162
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.35 E-value=2.6e-12 Score=115.48 Aligned_cols=107 Identities=17% Similarity=0.082 Sum_probs=82.9
Q ss_pred CCCEEEEECCCCChhHHHHHHh--cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhc--CCcc
Q 018352 31 PYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEK--ANQA 106 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~--~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~--~~~F 106 (357)
++.+|||+|||+|..+..++.. +..+|+|+|+|+.+++.|+++++..+...+++|+++|+... ...+... .++|
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~~~~~~f 141 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDT--LAELIHAGQAWQY 141 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHH--HHHHHTTTCTTCE
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHH--HHHhhhccCCCCc
Confidence 5679999999999888887765 25799999999999999999998766555699999997432 1111101 1789
Q ss_pred cEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEe
Q 018352 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 107 DlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~ 146 (357)
|+|++.... .....+++++.++|||||++++..
T Consensus 142 D~v~~~~~~-------~~~~~~l~~~~~~L~pgG~lv~~~ 174 (225)
T 3tr6_A 142 DLIYIDADK-------ANTDLYYEESLKLLREGGLIAVDN 174 (225)
T ss_dssp EEEEECSCG-------GGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cEEEECCCH-------HHHHHHHHHHHHhcCCCcEEEEeC
Confidence 999876532 235678999999999999999873
No 163
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.35 E-value=2.5e-12 Score=119.97 Aligned_cols=106 Identities=14% Similarity=0.066 Sum_probs=85.9
Q ss_pred CCCCEEEEECCCCChhHHHHHHh--cCCeEEEEeCChHHHHHHHHHhHhc-CCCceeEEEEcCCCCCchhhhhhhcCCcc
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQ-RKNFIAEFFEADPCAENFETQMQEKANQA 106 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~--~~~~v~GiDiS~~~l~~A~~r~~~~-~~~~~v~f~~~D~~~~~~~~~l~~~~~~F 106 (357)
.++.+|||+|||+|..+..++.. +..+++|+|+|+.+++.|+++.+.. + ..+++++++|+.. .+ ..++|
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g-~~~v~~~~~d~~~-~~------~~~~f 180 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYD-IGNVRTSRSDIAD-FI------SDQMY 180 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSC-CTTEEEECSCTTT-CC------CSCCE
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCC-CCcEEEEECchhc-cC------cCCCc
Confidence 46789999999999988888776 3569999999999999999998765 3 2368999999876 33 34789
Q ss_pred cEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCchHH
Q 018352 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTI 152 (357)
Q Consensus 107 DlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~i 152 (357)
|+|++.. . +...+++++.++|||||++++.+++....
T Consensus 181 D~Vi~~~------~---~~~~~l~~~~~~LkpgG~l~i~~~~~~~~ 217 (275)
T 1yb2_A 181 DAVIADI------P---DPWNHVQKIASMMKPGSVATFYLPNFDQS 217 (275)
T ss_dssp EEEEECC------S---CGGGSHHHHHHTEEEEEEEEEEESSHHHH
T ss_pred cEEEEcC------c---CHHHHHHHHHHHcCCCCEEEEEeCCHHHH
Confidence 9999832 1 23578999999999999999999987543
No 164
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.35 E-value=1.1e-11 Score=123.31 Aligned_cols=110 Identities=16% Similarity=0.095 Sum_probs=82.4
Q ss_pred CCCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHH-------HHHhHhcCCC-ceeEEEEcCCCCCchhhhh
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEA-------RDTWENQRKN-FIAEFFEADPCAENFETQM 99 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A-------~~r~~~~~~~-~~v~f~~~D~~~~~~~~~l 99 (357)
..++.+|||||||+|..+..++.. +..+|+|+|+|+.+++.| +++.+..+.. .+++++++|....... +
T Consensus 240 l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~--~ 317 (433)
T 1u2z_A 240 LKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNR--V 317 (433)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHH--H
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccccccc--c
Confidence 357889999999999888888775 556899999999999998 7776654421 3789999876543210 1
Q ss_pred hhcCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 100 QEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 100 ~~~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
....++||+|+++..++ . .+...+|+++.++|||||++++.
T Consensus 318 ~~~~~~FDvIvvn~~l~----~-~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 318 AELIPQCDVILVNNFLF----D-EDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp HHHGGGCSEEEECCTTC----C-HHHHHHHHHHHTTCCTTCEEEES
T ss_pred ccccCCCCEEEEeCccc----c-ccHHHHHHHHHHhCCCCeEEEEe
Confidence 00136899999876442 1 45667899999999999999976
No 165
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.35 E-value=8.5e-12 Score=114.36 Aligned_cols=106 Identities=13% Similarity=0.034 Sum_probs=78.9
Q ss_pred CCCCCEEEEECCCCChhHHHHHHh--cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcc
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~--~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~F 106 (357)
+.++.+|||+|||+|+.+..++.. +.++|+|+|+|+.|++...+..+.. .++.++++|+........ ..++|
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r---~nv~~i~~Da~~~~~~~~---~~~~~ 147 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR---PNIFPLLADARFPQSYKS---VVENV 147 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC---TTEEEEECCTTCGGGTTT---TCCCE
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc---CCeEEEEcccccchhhhc---cccce
Confidence 458899999999999988887765 4669999999999986655444332 278999999876432111 24689
Q ss_pred cEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEe
Q 018352 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 107 DlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~ 146 (357)
|+|++..+. ..+.+.++.++.+.|||||+|++.+
T Consensus 148 D~I~~d~a~------~~~~~il~~~~~~~LkpGG~lvisi 181 (232)
T 3id6_C 148 DVLYVDIAQ------PDQTDIAIYNAKFFLKVNGDMLLVI 181 (232)
T ss_dssp EEEEECCCC------TTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEecCCC------hhHHHHHHHHHHHhCCCCeEEEEEE
Confidence 999987643 2345556677788999999999884
No 166
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.35 E-value=3.9e-12 Score=115.31 Aligned_cols=107 Identities=15% Similarity=0.129 Sum_probs=84.4
Q ss_pred CCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEE
Q 018352 31 PYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
++.+|||+|||+|..+..++.. +..+|+|+|+|+.+++.|+++++..+...++.++.+|+..... ... ..++||+|
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~~-~~~~fD~I 130 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGE--KLE-LYPLFDVL 130 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHH--HHT-TSCCEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHH--hcc-cCCCccEE
Confidence 6789999999999888887776 3579999999999999999998776544468999999865211 110 14789999
Q ss_pred EEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeC
Q 018352 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (357)
Q Consensus 110 ~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~p 147 (357)
++....+ ....+++++.++|+|||++++...
T Consensus 131 ~~~~~~~-------~~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 131 FIDAAKG-------QYRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp EEEGGGS-------CHHHHHHHHGGGEEEEEEEEEETT
T ss_pred EECCCHH-------HHHHHHHHHHHHcCCCeEEEEEcC
Confidence 9877543 356789999999999999998743
No 167
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.35 E-value=1.1e-11 Score=112.67 Aligned_cols=108 Identities=11% Similarity=0.057 Sum_probs=87.3
Q ss_pred CCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEE
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
.++.+|||+|||+|..+..++.. ..+++|+|+|+.+++.|+++.+..+...++.+..+|+....+ ..++||+|
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~------~~~~~D~v 162 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEV------PEGIFHAA 162 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCC------CTTCBSEE
T ss_pred CCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhccc------CCCcccEE
Confidence 47889999999999888888777 669999999999999999998765543478999999876432 24689999
Q ss_pred EEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCchHHH
Q 018352 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIW 153 (357)
Q Consensus 110 ~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~i~ 153 (357)
++... +...+++++.++|+|||++++.+++.+.+.
T Consensus 163 ~~~~~---------~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~ 197 (248)
T 2yvl_A 163 FVDVR---------EPWHYLEKVHKSLMEGAPVGFLLPTANQVI 197 (248)
T ss_dssp EECSS---------CGGGGHHHHHHHBCTTCEEEEEESSHHHHH
T ss_pred EECCc---------CHHHHHHHHHHHcCCCCEEEEEeCCHHHHH
Confidence 87431 234678999999999999999999875543
No 168
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.34 E-value=5.1e-12 Score=118.36 Aligned_cols=111 Identities=11% Similarity=0.098 Sum_probs=83.5
Q ss_pred CEEEEECCCC--ChhHHHHHHh--cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh--cCCcc
Q 018352 33 VTVCDLYCGA--GVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KANQA 106 (357)
Q Consensus 33 ~~VLDlGCG~--G~~l~k~~~~--~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~--~~~~F 106 (357)
.+|||||||+ ++.+..+++. +..+|+++|.|+.||+.|++++.... ..++.|+++|+..... .+.. ....|
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~-~~~~~~v~aD~~~~~~--~l~~~~~~~~~ 156 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP-EGRTAYVEADMLDPAS--ILDAPELRDTL 156 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS-SSEEEEEECCTTCHHH--HHTCHHHHTTC
T ss_pred CEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC-CCcEEEEEecccChhh--hhccccccccc
Confidence 5899999997 5566666553 56799999999999999999986532 2368999999977421 0100 02345
Q ss_pred c-----EEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeC
Q 018352 107 D-----LVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (357)
Q Consensus 107 D-----lV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~p 147 (357)
| .|+++.+||| +...++...+++.+.+.|+|||+|+++..
T Consensus 157 D~~~p~av~~~avLH~-l~d~~~p~~~l~~l~~~L~PGG~Lvls~~ 201 (277)
T 3giw_A 157 DLTRPVALTVIAIVHF-VLDEDDAVGIVRRLLEPLPSGSYLAMSIG 201 (277)
T ss_dssp CTTSCCEEEEESCGGG-SCGGGCHHHHHHHHHTTSCTTCEEEEEEE
T ss_pred CcCCcchHHhhhhHhc-CCchhhHHHHHHHHHHhCCCCcEEEEEec
Confidence 5 5778899999 54444468899999999999999998843
No 169
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.34 E-value=8e-12 Score=116.09 Aligned_cols=111 Identities=15% Similarity=0.082 Sum_probs=88.9
Q ss_pred CCCCCEEEEECCCCChhHHHHHHh--cCCeEEEEeCChHHHHHHHHHhHhc-C-CCceeEEEEcCCCCCchhhhhhhcCC
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQ-R-KNFIAEFFEADPCAENFETQMQEKAN 104 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~--~~~~v~GiDiS~~~l~~A~~r~~~~-~-~~~~v~f~~~D~~~~~~~~~l~~~~~ 104 (357)
..++.+|||+|||+|..+..++.. +..+++|+|+|+.+++.|+++.+.. + ...++.++++|+....+ ..+
T Consensus 97 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~------~~~ 170 (280)
T 1i9g_A 97 IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSEL------PDG 170 (280)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCC------CTT
T ss_pred CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCC------CCC
Confidence 457889999999999988888775 3579999999999999999988654 2 23368999999876544 357
Q ss_pred cccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCchHHHH
Q 018352 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWA 154 (357)
Q Consensus 105 ~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~i~~ 154 (357)
+||+|++... +...+++++.++|+|||++++.+|+.+.+.+
T Consensus 171 ~~D~v~~~~~---------~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~ 211 (280)
T 1i9g_A 171 SVDRAVLDML---------APWEVLDAVSRLLVAGGVLMVYVATVTQLSR 211 (280)
T ss_dssp CEEEEEEESS---------CGGGGHHHHHHHEEEEEEEEEEESSHHHHHH
T ss_pred ceeEEEECCc---------CHHHHHHHHHHhCCCCCEEEEEeCCHHHHHH
Confidence 8999998431 1336799999999999999999999766544
No 170
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.33 E-value=5.4e-12 Score=111.27 Aligned_cols=109 Identities=11% Similarity=0.104 Sum_probs=77.4
Q ss_pred CCCCCEEEEECCCCChhHHHHHHh-c--CCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCc-----------
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETA-L--IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAEN----------- 94 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~-~--~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~----------- 94 (357)
+.++.+|||||||+|..+..++.. + ..+|+|+|+|+.+ . ..++.++++|+....
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~--------~----~~~v~~~~~d~~~~~~~~~~~~~~i~ 87 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD--------P----IPNVYFIQGEIGKDNMNNIKNINYID 87 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC--------C----CTTCEEEECCTTTTSSCCC-------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC--------C----CCCceEEEccccchhhhhhccccccc
Confidence 567889999999999988888765 3 4699999999831 0 125789999997754
Q ss_pred ------hhhhhh--hcCCcccEEEEccchhhccCC-HHH------HHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 95 ------FETQMQ--EKANQADLVCCFQHLQMCFET-EER------ARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 95 ------~~~~l~--~~~~~FDlV~~~~~lh~~fes-~~~------~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
....+. ...++||+|+|..++|+.-.+ .+. ...+++++.++|||||.|++.+...
T Consensus 88 ~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 157 (201)
T 2plw_A 88 NMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLG 157 (201)
T ss_dssp ----CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred cccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCC
Confidence 000000 134789999998877762111 111 2358999999999999999876543
No 171
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.33 E-value=7e-12 Score=119.56 Aligned_cols=103 Identities=12% Similarity=0.029 Sum_probs=82.9
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhc--CCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcc
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETAL--IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~--~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~F 106 (357)
..++.+|||+|||+|..+..++... ..+|+|+|+|+++++.|+++.+..+.. ++++..+|+..... ..++|
T Consensus 73 ~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~-~v~~~~~d~~~~~~------~~~~f 145 (317)
T 1dl5_A 73 LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIE-NVIFVCGDGYYGVP------EFSPY 145 (317)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCG------GGCCE
T ss_pred CCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CeEEEECChhhccc------cCCCe
Confidence 3578899999999998888777653 357999999999999999998765443 48999999865332 24789
Q ss_pred cEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCC
Q 018352 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 107 DlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
|+|++..++|+ +. +++.++|||||++++.+..
T Consensus 146 D~Iv~~~~~~~-~~---------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 146 DVIFVTVGVDE-VP---------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp EEEEECSBBSC-CC---------HHHHHHEEEEEEEEEEBCB
T ss_pred EEEEEcCCHHH-HH---------HHHHHhcCCCcEEEEEECC
Confidence 99999998887 31 4678899999999998644
No 172
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.33 E-value=5.7e-12 Score=116.44 Aligned_cols=105 Identities=13% Similarity=0.007 Sum_probs=82.1
Q ss_pred CCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEE
Q 018352 31 PYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
++.+|||||||+|..+..++.. +..+|+|+|+|+.+++.|+++.+..+.. +++++++|+....... ...++||+|
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~-~v~~~~~d~~~~~~~~---~~~~~fD~I 155 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLK-GARALWGRAEVLAREA---GHREAYARA 155 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEECCHHHHTTST---TTTTCEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC-ceEEEECcHHHhhccc---ccCCCceEE
Confidence 5789999999999887777765 5679999999999999999998876543 5999999975422100 023789999
Q ss_pred EEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeC
Q 018352 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (357)
Q Consensus 110 ~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~p 147 (357)
+|.. +.+ ...+++.+.++|||||+|++...
T Consensus 156 ~s~a-----~~~---~~~ll~~~~~~LkpgG~l~~~~g 185 (249)
T 3g89_A 156 VARA-----VAP---LCVLSELLLPFLEVGGAAVAMKG 185 (249)
T ss_dssp EEES-----SCC---HHHHHHHHGGGEEEEEEEEEEEC
T ss_pred EECC-----cCC---HHHHHHHHHHHcCCCeEEEEEeC
Confidence 9864 222 45789999999999999998753
No 173
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.33 E-value=8.7e-12 Score=113.36 Aligned_cols=104 Identities=13% Similarity=0.098 Sum_probs=82.6
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
..++.+|||+|||+|..+..++.....+|+|+|+|+.+++.|+++.+..+.. ++.+..+|+. ..+. ...+||+
T Consensus 89 ~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~-~~~~-----~~~~fD~ 161 (235)
T 1jg1_A 89 LKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVK-NVHVILGDGS-KGFP-----PKAPYDV 161 (235)
T ss_dssp CCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGG-GCCG-----GGCCEEE
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCC-CcEEEECCcc-cCCC-----CCCCccE
Confidence 4577899999999998888877764379999999999999999998765432 4889999972 2221 1246999
Q ss_pred EEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
|++..++++.. .++.++|+|||++++.+++.
T Consensus 162 Ii~~~~~~~~~----------~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 162 IIVTAGAPKIP----------EPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp EEECSBBSSCC----------HHHHHTEEEEEEEEEEECSS
T ss_pred EEECCcHHHHH----------HHHHHhcCCCcEEEEEEecC
Confidence 99999888732 36788999999999998775
No 174
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.32 E-value=2.2e-11 Score=116.81 Aligned_cols=115 Identities=17% Similarity=0.056 Sum_probs=85.9
Q ss_pred CCCCCEEEEECCCCChhHHHHHHh-cC-CeEEEEeCChHHHHHHHHHhHhcC----------CCceeEEEEcCCCCCchh
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETA-LI-ANYIGIDVATSGIGEARDTWENQR----------KNFIAEFFEADPCAENFE 96 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~-~~-~~v~GiDiS~~~l~~A~~r~~~~~----------~~~~v~f~~~D~~~~~~~ 96 (357)
..++.+|||+|||+|..+..++.. +. .+|+|+|+++.+++.|+++....+ ...++++.++|+.....
T Consensus 103 ~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~- 181 (336)
T 2b25_A 103 INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATE- 181 (336)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC--
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccc-
Confidence 457889999999999888888775 33 799999999999999999886421 12378999999977421
Q ss_pred hhhhhcCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCchHHHHHH
Q 018352 97 TQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKY 156 (357)
Q Consensus 97 ~~l~~~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~i~~~~ 156 (357)
.+ ..++||+|++....++ .++.++.++|+|||++++..++.+.+.+.+
T Consensus 182 -~~--~~~~fD~V~~~~~~~~---------~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~ 229 (336)
T 2b25_A 182 -DI--KSLTFDAVALDMLNPH---------VTLPVFYPHLKHGGVCAVYVVNITQVIELL 229 (336)
T ss_dssp ---------EEEEEECSSSTT---------TTHHHHGGGEEEEEEEEEEESSHHHHHHHH
T ss_pred -cc--CCCCeeEEEECCCCHH---------HHHHHHHHhcCCCcEEEEEeCCHHHHHHHH
Confidence 01 3467999998653222 268999999999999999999876655433
No 175
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.32 E-value=8.2e-12 Score=122.72 Aligned_cols=125 Identities=17% Similarity=0.097 Sum_probs=94.1
Q ss_pred HHHHHcCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhc
Q 018352 23 ALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEK 102 (357)
Q Consensus 23 ~Li~~~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~ 102 (357)
.++..+..++.+|||+|||+|..+..++..+..+|+|+|+|+.+++.|+++++.++...+++|+++|+... ...+...
T Consensus 209 ~~~~~~~~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~--~~~~~~~ 286 (396)
T 2as0_A 209 LALEKWVQPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEE--MEKLQKK 286 (396)
T ss_dssp HHHGGGCCTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHH--HHHHHHT
T ss_pred HHHHHHhhCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHH--HHHHHhh
Confidence 44555655788999999999999988887767799999999999999999998775544789999997542 1111112
Q ss_pred CCcccEEEEccchh-----hccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 103 ANQADLVCCFQHLQ-----MCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 103 ~~~FDlV~~~~~lh-----~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
.++||+|++..... ..+........++.++.++|+|||+++.++++.
T Consensus 287 ~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 287 GEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp TCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred CCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 57899999854211 111123567789999999999999999887665
No 176
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.31 E-value=2.2e-11 Score=107.63 Aligned_cols=101 Identities=12% Similarity=-0.002 Sum_probs=76.8
Q ss_pred CCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEE
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
.++.+|||+|||+|..+..++..+..+++|+|+|+.+++.|+++.+ +++++++|+.. + +++||+|
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~------~~~~~~~d~~~--~-------~~~~D~v 114 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG------GVNFMVADVSE--I-------SGKYDTW 114 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT------TSEEEECCGGG--C-------CCCEEEE
T ss_pred CCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC------CCEEEECcHHH--C-------CCCeeEE
Confidence 4678999999999988888877766689999999999999998875 57899999865 2 2689999
Q ss_pred EEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 110 ~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
++...+|+ +.. .....+++.+.+.| |+.++...+..
T Consensus 115 ~~~~p~~~-~~~-~~~~~~l~~~~~~~--g~~~~~~~~~~ 150 (200)
T 1ne2_A 115 IMNPPFGS-VVK-HSDRAFIDKAFETS--MWIYSIGNAKA 150 (200)
T ss_dssp EECCCC---------CHHHHHHHHHHE--EEEEEEEEGGG
T ss_pred EECCCchh-ccC-chhHHHHHHHHHhc--CcEEEEEcCch
Confidence 99998888 322 23457899999998 66555555544
No 177
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.31 E-value=3.5e-12 Score=125.11 Aligned_cols=107 Identities=14% Similarity=0.199 Sum_probs=80.3
Q ss_pred HHHHcCCCCCEEEEECCC------CChhHHHHHHh--cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCch
Q 018352 24 LIKIYSHPYVTVCDLYCG------AGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENF 95 (357)
Q Consensus 24 Li~~~~~~~~~VLDlGCG------~G~~l~k~~~~--~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~ 95 (357)
++..+..+..+||||||| +|+.+..+... +..+|+|+|+|+.|. .. ..+++|+++|+.+.++
T Consensus 209 lL~~l~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~------~~----~~rI~fv~GDa~dlpf 278 (419)
T 3sso_A 209 HFRDYRNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH------VD----ELRIRTIQGDQNDAEF 278 (419)
T ss_dssp HHGGGTTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG------GC----BTTEEEEECCTTCHHH
T ss_pred HHHhhcCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh------hc----CCCcEEEEecccccch
Confidence 445555677899999999 66666555544 567999999999983 11 2379999999988666
Q ss_pred hhhhhhcCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 96 ETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 96 ~~~l~~~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
...+....++||+|+|.. .|+ ..+..++|+++.++|||||+|++.
T Consensus 279 ~~~l~~~d~sFDlVisdg-sH~----~~d~~~aL~el~rvLKPGGvlVi~ 323 (419)
T 3sso_A 279 LDRIARRYGPFDIVIDDG-SHI----NAHVRTSFAALFPHVRPGGLYVIE 323 (419)
T ss_dssp HHHHHHHHCCEEEEEECS-CCC----HHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred hhhhhcccCCccEEEECC-ccc----chhHHHHHHHHHHhcCCCeEEEEE
Confidence 432222257899999875 455 356788999999999999999987
No 178
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.31 E-value=5.4e-12 Score=114.04 Aligned_cols=104 Identities=11% Similarity=0.081 Sum_probs=81.6
Q ss_pred CCCCCEEEEECCCCChhHHHHHHh-c------CCeEEEEeCChHHHHHHHHHhHhcCC----CceeEEEEcCCCCCchhh
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETA-L------IANYIGIDVATSGIGEARDTWENQRK----NFIAEFFEADPCAENFET 97 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~-~------~~~v~GiDiS~~~l~~A~~r~~~~~~----~~~v~f~~~D~~~~~~~~ 97 (357)
..++.+|||+|||+|..+..++.. + ..+|+|+|+++.+++.|+++...... ..++.++++|+.. .+.
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~- 159 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-GYP- 159 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-CCG-
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc-CCC-
Confidence 467889999999999888877764 3 25999999999999999998765320 1268999999865 221
Q ss_pred hhhhcCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCC
Q 018352 98 QMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 98 ~l~~~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
..++||+|++..++|++ ++++.++|||||++++.+..
T Consensus 160 ----~~~~fD~I~~~~~~~~~----------~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 160 ----PNAPYNAIHVGAAAPDT----------PTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp ----GGCSEEEEEECSCBSSC----------CHHHHHTEEEEEEEEEEESC
T ss_pred ----cCCCccEEEECCchHHH----------HHHHHHHhcCCCEEEEEEec
Confidence 13689999999988873 26788999999999998754
No 179
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.30 E-value=9.3e-12 Score=120.07 Aligned_cols=110 Identities=19% Similarity=0.098 Sum_probs=82.4
Q ss_pred HHHHc-CCCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh
Q 018352 24 LIKIY-SHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE 101 (357)
Q Consensus 24 Li~~~-~~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~ 101 (357)
++..+ ..++.+|||||||+|..+..+++. +..+++++|++ .++. +++.+......+++|+.+|+. .++
T Consensus 176 ~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~--~~~~~~~~~~~~v~~~~~d~~-~~~------ 245 (348)
T 3lst_A 176 LARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRA-EVVA--RHRLDAPDVAGRWKVVEGDFL-REV------ 245 (348)
T ss_dssp HHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECH-HHHT--TCCCCCGGGTTSEEEEECCTT-TCC------
T ss_pred HHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCH-HHhh--cccccccCCCCCeEEEecCCC-CCC------
Confidence 44444 246789999999999988888776 44589999994 4444 222222222346999999987 333
Q ss_pred cCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeC
Q 018352 102 KANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (357)
Q Consensus 102 ~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~p 147 (357)
+ +||+|++..++|+ + +.++..++|++++++|||||++++..+
T Consensus 246 p--~~D~v~~~~vlh~-~-~d~~~~~~L~~~~~~LkpgG~l~i~e~ 287 (348)
T 3lst_A 246 P--HADVHVLKRILHN-W-GDEDSVRILTNCRRVMPAHGRVLVIDA 287 (348)
T ss_dssp C--CCSEEEEESCGGG-S-CHHHHHHHHHHHHHTCCTTCEEEEEEC
T ss_pred C--CCcEEEEehhccC-C-CHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 3 8999999999998 5 456678999999999999999998743
No 180
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.30 E-value=4e-12 Score=113.42 Aligned_cols=102 Identities=14% Similarity=0.085 Sum_probs=79.8
Q ss_pred CCCEEEEECCCCChhHHHHHHh-c-CCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 31 PYVTVCDLYCGAGVDVDKWETA-L-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~-~-~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
+..+|||+|||+|..+..++.. + ..+|+|+|+|+.+++.|+++++..+...+++++++|+... ++...+ ||+
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~~~~~~-fD~ 129 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGI-----AAGQRD-IDI 129 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHH-----HTTCCS-EEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHH-----hccCCC-CCE
Confidence 5679999999999888777665 2 5799999999999999999987655444689999987431 111235 999
Q ss_pred EEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
|++.... .....+++++.++|||||++++.
T Consensus 130 v~~~~~~-------~~~~~~l~~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 130 LFMDCDV-------FNGADVLERMNRCLAKNALLIAV 159 (210)
T ss_dssp EEEETTT-------SCHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEEcCCh-------hhhHHHHHHHHHhcCCCeEEEEE
Confidence 9886422 23567899999999999999986
No 181
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.30 E-value=2.5e-11 Score=113.88 Aligned_cols=111 Identities=15% Similarity=0.033 Sum_probs=80.7
Q ss_pred CCCCEEEEECCCCChhHHHHHHhcCCeEEEEeC-ChHHHHHHHHHhH-----hcCCC----ceeEEEEcCCCCCchhhhh
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDV-ATSGIGEARDTWE-----NQRKN----FIAEFFEADPCAENFETQM 99 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDi-S~~~l~~A~~r~~-----~~~~~----~~v~f~~~D~~~~~~~~~l 99 (357)
.++.+|||||||+|..+..++..+..+|+|+|+ |+.+++.|+++.. ..+.. .++.+...|.....- ...
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~ 156 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPD-SLQ 156 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTH-HHH
T ss_pred cCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccH-HHH
Confidence 367899999999998887777766669999999 8999999999883 32221 257777776554211 111
Q ss_pred hh-cCCcccEEEEccchhhccCCHHHHHHHHHHHHhccc---C--CcEEEEE
Q 018352 100 QE-KANQADLVCCFQHLQMCFETEERARRLLQNVSSLLK---P--GGYFLGI 145 (357)
Q Consensus 100 ~~-~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~Lk---p--GG~fi~t 145 (357)
.. ..++||+|++..++++ ......+++.+.++|+ | ||++++.
T Consensus 157 ~~~~~~~fD~Ii~~dvl~~----~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~ 204 (281)
T 3bzb_A 157 RCTGLQRFQVVLLADLLSF----HQAHDALLRSVKMLLALPANDPTAVALVT 204 (281)
T ss_dssp HHHSCSSBSEEEEESCCSC----GGGHHHHHHHHHHHBCCTTTCTTCEEEEE
T ss_pred hhccCCCCCEEEEeCcccC----hHHHHHHHHHHHHHhcccCCCCCCEEEEE
Confidence 00 2478999999887666 3457789999999999 9 9987765
No 182
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.30 E-value=5.3e-12 Score=109.52 Aligned_cols=99 Identities=12% Similarity=0.123 Sum_probs=75.7
Q ss_pred CCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEE
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
.++.+|||+|||+|..+..++... +++|+|+|+.|++. . .+++++++|+.. .+ .+++||+|
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~~~------~----~~~~~~~~d~~~-~~------~~~~fD~i 82 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRALES------H----RGGNLVRADLLC-SI------NQESVDVV 82 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHHHT------C----SSSCEEECSTTT-TB------CGGGCSEE
T ss_pred CCCCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHHhc------c----cCCeEEECChhh-hc------ccCCCCEE
Confidence 456799999999998777776555 99999999999987 2 267899999876 33 34789999
Q ss_pred EEccchhhccCCH------HHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 110 CCFQHLQMCFETE------ERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 110 ~~~~~lh~~fes~------~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
+|+..+|.. ... .+...+++++.+.| |||++++..+..
T Consensus 83 ~~n~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~ 126 (170)
T 3q87_B 83 VFNPPYVPD-TDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA 126 (170)
T ss_dssp EECCCCBTT-CCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG
T ss_pred EECCCCccC-CccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC
Confidence 999887752 111 12345778888888 999999886543
No 183
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.30 E-value=2.3e-11 Score=111.20 Aligned_cols=121 Identities=9% Similarity=-0.098 Sum_probs=93.6
Q ss_pred HHHHcCCCCCEEEEECCCCChhHHHHHHhc-CCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhc
Q 018352 24 LIKIYSHPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEK 102 (357)
Q Consensus 24 Li~~~~~~~~~VLDlGCG~G~~l~k~~~~~-~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~ 102 (357)
.+..+++++.+|||||||+|..+..++..+ ..+++|+|+++.+++.|+++.+.++...++++.++|...... +
T Consensus 14 ~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~------~ 87 (230)
T 3lec_A 14 KVANYVPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFE------E 87 (230)
T ss_dssp HHHTTSCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC------G
T ss_pred HHHHhCCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccc------c
Confidence 356788899999999999998888777764 568999999999999999999887766679999999865322 2
Q ss_pred CCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc-hHHHHHH
Q 018352 103 ANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS-STIWAKY 156 (357)
Q Consensus 103 ~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~-~~i~~~~ 156 (357)
..+||+|++.. + .-+-...++....+.|+++|+|+...... +.+.+.+
T Consensus 88 ~~~~D~IviaG----m--Gg~lI~~IL~~~~~~l~~~~~lIlqp~~~~~~lr~~L 136 (230)
T 3lec_A 88 ADNIDTITICG----M--GGRLIADILNNDIDKLQHVKTLVLQPNNREDDLRKWL 136 (230)
T ss_dssp GGCCCEEEEEE----E--CHHHHHHHHHHTGGGGTTCCEEEEEESSCHHHHHHHH
T ss_pred ccccCEEEEeC----C--chHHHHHHHHHHHHHhCcCCEEEEECCCChHHHHHHH
Confidence 23799987644 1 22457788999999999999999885444 3443333
No 184
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.30 E-value=8.2e-12 Score=119.25 Aligned_cols=112 Identities=18% Similarity=0.093 Sum_probs=84.4
Q ss_pred CCCCEEEEECCCCChhHHHHHHh--cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCccc
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~--~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FD 107 (357)
.++.+|||+|||+|+.+..++.. +..+|+|+|+|+.+++.++++.+..+.. ++.++++|+..... ..++||
T Consensus 117 ~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~~~------~~~~fD 189 (315)
T 1ixk_A 117 KPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVL-NVILFHSSSLHIGE------LNVEFD 189 (315)
T ss_dssp CTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCC-SEEEESSCGGGGGG------GCCCEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-eEEEEECChhhccc------ccccCC
Confidence 47789999999999988888775 3469999999999999999998766443 68999999865332 246899
Q ss_pred EEEEccc------hhhcc-----CCH-------HHHHHHHHHHHhcccCCcEEEEEeCC
Q 018352 108 LVCCFQH------LQMCF-----ETE-------ERARRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 108 lV~~~~~------lh~~f-----es~-------~~~~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
+|++... ++..- -+. ....++|+++.++|||||+++.+++.
T Consensus 190 ~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs 248 (315)
T 1ixk_A 190 KILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCS 248 (315)
T ss_dssp EEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred EEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 9998421 21100 011 12368999999999999999987654
No 185
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.29 E-value=1.3e-11 Score=112.45 Aligned_cols=107 Identities=15% Similarity=0.139 Sum_probs=82.9
Q ss_pred CCCEEEEECCCCChhHHHHHHhc--CCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh-------
Q 018352 31 PYVTVCDLYCGAGVDVDKWETAL--IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE------- 101 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~~--~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~------- 101 (357)
++.+|||||||+|..+..++... ..+|+|+|+++.+++.|+++++..+...++.++++|+... + ..+..
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~-~-~~~~~~~~~~~~ 137 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALET-L-QVLIDSKSAPSW 137 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHH-H-HHHHHCSSCCGG
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHH-H-HHHHhhcccccc
Confidence 57899999999998888887763 5799999999999999999987665444689999987431 1 11110
Q ss_pred ----c-C-CcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEe
Q 018352 102 ----K-A-NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 102 ----~-~-~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~ 146 (357)
. . ++||+|++..... ....+++++.++|+|||++++..
T Consensus 138 ~~~f~~~~~~fD~I~~~~~~~-------~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 138 ASDFAFGPSSIDLFFLDADKE-------NYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp GTTTCCSTTCEEEEEECSCGG-------GHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cccccCCCCCcCEEEEeCCHH-------HHHHHHHHHHHHcCCCeEEEEEc
Confidence 1 2 6899999876433 24578999999999999999875
No 186
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.29 E-value=4.6e-12 Score=118.45 Aligned_cols=116 Identities=10% Similarity=0.016 Sum_probs=84.7
Q ss_pred CCCCEEEEECCCCChhHHHHHHh--cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCccc
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~--~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FD 107 (357)
.++.+|||+|||+|+.+..++.. +..+|+|+|+|+.+++.++++.+..+.. ++.++++|+..... .+....++||
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~--~~~~~~~~fD 158 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVL-NTIIINADMRKYKD--YLLKNEIFFD 158 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCHHHHHH--HHHHTTCCEE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCC-cEEEEeCChHhcch--hhhhccccCC
Confidence 46789999999999998888774 4479999999999999999998776543 78999999754221 1111246899
Q ss_pred EEEEccchhh--ccC-----C-------HHHHHHHHHHHHhcccCCcEEEEEeCC
Q 018352 108 LVCCFQHLQM--CFE-----T-------EERARRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 108 lV~~~~~lh~--~fe-----s-------~~~~~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
+|++...... .+. + .....++++++.++|||||+++.++++
T Consensus 159 ~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs 213 (274)
T 3ajd_A 159 KILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCS 213 (274)
T ss_dssp EEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred EEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECC
Confidence 9998632111 000 0 023468899999999999999988654
No 187
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.28 E-value=1.5e-12 Score=119.77 Aligned_cols=106 Identities=12% Similarity=0.038 Sum_probs=82.9
Q ss_pred CCCEEEEECCCCChhHHHHHHh--cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh--cCCcc
Q 018352 31 PYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KANQA 106 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~--~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~--~~~~F 106 (357)
+..+|||||||+|..+..++.. ...+|+|+|+|+.+++.|+++++..+...+++++++|+... ...+.. ..++|
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~--l~~~~~~~~~~~f 137 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDT--LHSLLNEGGEHQF 137 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHH--HHHHHHHHCSSCE
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH--HHHHhhccCCCCE
Confidence 4679999999999888888775 35799999999999999999998766555799999997542 111110 14789
Q ss_pred cEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 107 DlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
|+|++.... .....+++++.++|||||++++.
T Consensus 138 D~V~~d~~~-------~~~~~~l~~~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 138 DFIFIDADK-------TNYLNYYELALKLVTPKGLIAID 169 (242)
T ss_dssp EEEEEESCG-------GGHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEEcCCh-------HHhHHHHHHHHHhcCCCeEEEEE
Confidence 999886532 23556899999999999999986
No 188
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.28 E-value=3.9e-12 Score=113.54 Aligned_cols=88 Identities=18% Similarity=0.200 Sum_probs=71.8
Q ss_pred CCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEE
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
.++.+|||+|||+|..+..+ ..+++|+|+|+. ++.+.++|+...++ .+++||+|
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l----~~~v~~~D~s~~----------------~~~~~~~d~~~~~~------~~~~fD~v 119 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSI----RNPVHCFDLASL----------------DPRVTVCDMAQVPL------EDESVDVA 119 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHC----CSCEEEEESSCS----------------STTEEESCTTSCSC------CTTCEEEE
T ss_pred CCCCeEEEECCcCCHHHHHh----hccEEEEeCCCC----------------CceEEEeccccCCC------CCCCEeEE
Confidence 46789999999999776655 268999999987 34678899877655 46789999
Q ss_pred EEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCC
Q 018352 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 110 ~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
+|..++|+ .+...+++++.++|+|||+++++.+.
T Consensus 120 ~~~~~l~~-----~~~~~~l~~~~~~L~~gG~l~i~~~~ 153 (215)
T 2zfu_A 120 VFCLSLMG-----TNIRDFLEEANRVLKPGGLLKVAEVS 153 (215)
T ss_dssp EEESCCCS-----SCHHHHHHHHHHHEEEEEEEEEEECG
T ss_pred EEehhccc-----cCHHHHHHHHHHhCCCCeEEEEEEcC
Confidence 99998885 24678899999999999999988543
No 189
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.28 E-value=3.1e-11 Score=111.30 Aligned_cols=122 Identities=9% Similarity=-0.077 Sum_probs=94.1
Q ss_pred HHHHcCCCCCEEEEECCCCChhHHHHHHhc-CCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhc
Q 018352 24 LIKIYSHPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEK 102 (357)
Q Consensus 24 Li~~~~~~~~~VLDlGCG~G~~l~k~~~~~-~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~ 102 (357)
.+..+++++.+|||||||+|..+..++..+ ..+++|+|+++.+++.|+++.+.++...++++..+|...... +
T Consensus 14 ~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~------~ 87 (244)
T 3gnl_A 14 KVASYITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIE------K 87 (244)
T ss_dssp HHHTTCCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC------G
T ss_pred HHHHhCCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccC------c
Confidence 466788899999999999998887777764 458999999999999999999887766679999999865322 2
Q ss_pred CCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc-hHHHHHHH
Q 018352 103 ANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS-STIWAKYQ 157 (357)
Q Consensus 103 ~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~-~~i~~~~~ 157 (357)
..+||+|++.. + ..+-...++....+.|+++|+|++..... +.+.+.+.
T Consensus 88 ~~~~D~Iviag----m--Gg~lI~~IL~~~~~~L~~~~~lIlq~~~~~~~lr~~L~ 137 (244)
T 3gnl_A 88 KDAIDTIVIAG----M--GGTLIRTILEEGAAKLAGVTKLILQPNIAAWQLREWSE 137 (244)
T ss_dssp GGCCCEEEEEE----E--CHHHHHHHHHHTGGGGTTCCEEEEEESSCHHHHHHHHH
T ss_pred cccccEEEEeC----C--chHHHHHHHHHHHHHhCCCCEEEEEcCCChHHHHHHHH
Confidence 23599987644 1 23457778999999999999999885444 44444443
No 190
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.28 E-value=2.9e-11 Score=110.21 Aligned_cols=121 Identities=12% Similarity=0.002 Sum_probs=92.7
Q ss_pred HHHHcCCCCCEEEEECCCCChhHHHHHHhc-CCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhc
Q 018352 24 LIKIYSHPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEK 102 (357)
Q Consensus 24 Li~~~~~~~~~VLDlGCG~G~~l~k~~~~~-~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~ 102 (357)
.+..+++++.+|||||||+|..+..++..+ ..+|+|+|+++.+++.|+++.+.++...++++..+|.... + . .
T Consensus 8 ~l~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~-l----~-~ 81 (225)
T 3kr9_A 8 LVASFVSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAA-F----E-E 81 (225)
T ss_dssp HHHTTSCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGG-C----C-G
T ss_pred HHHHhCCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhh-c----c-c
Confidence 356778889999999999998888877764 5689999999999999999998877666799999998542 2 0 1
Q ss_pred CCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc-hHHHHHH
Q 018352 103 ANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS-STIWAKY 156 (357)
Q Consensus 103 ~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~-~~i~~~~ 156 (357)
..+||+|++... .-+....++..+.+.|+++|+|++..... +.+.+.+
T Consensus 82 ~~~~D~IviaG~------Gg~~i~~Il~~~~~~L~~~~~lVlq~~~~~~~vr~~L 130 (225)
T 3kr9_A 82 TDQVSVITIAGM------GGRLIARILEEGLGKLANVERLILQPNNREDDLRIWL 130 (225)
T ss_dssp GGCCCEEEEEEE------CHHHHHHHHHHTGGGCTTCCEEEEEESSCHHHHHHHH
T ss_pred CcCCCEEEEcCC------ChHHHHHHHHHHHHHhCCCCEEEEECCCCHHHHHHHH
Confidence 126998876541 22346788999999999999999875444 3444433
No 191
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.28 E-value=2.9e-11 Score=114.55 Aligned_cols=110 Identities=12% Similarity=0.095 Sum_probs=80.6
Q ss_pred CCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcC----CCceeEEEEcCCCCCchhhhhhhcCC
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQR----KNFIAEFFEADPCAENFETQMQEKAN 104 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~----~~~~v~f~~~D~~~~~~~~~l~~~~~ 104 (357)
++..+|||||||+|+.+..+++. +..+|+++|+|+.+++.|++++.... ...+++++.+|+....- ...+
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~-----~~~~ 156 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVN-----QTSQ 156 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC--------CCCC
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHh-----hcCC
Confidence 45689999999999888888776 46789999999999999999876431 12378999999865311 1357
Q ss_pred cccEEEEccchhhccCCHHHH--HHHHHHHHhcccCCcEEEEEe
Q 018352 105 QADLVCCFQHLQMCFETEERA--RRLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 105 ~FDlV~~~~~lh~~fes~~~~--~~~L~~i~~~LkpGG~fi~t~ 146 (357)
+||+|++....++. ..... ..+++.+.++|+|||+|++..
T Consensus 157 ~fDvIi~D~~~p~~--~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 157 TFDVIISDCTDPIG--PGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp CEEEEEECC------------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred CccEEEECCCCccC--cchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 89999996654431 11122 679999999999999999874
No 192
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.27 E-value=1.5e-11 Score=114.62 Aligned_cols=108 Identities=13% Similarity=0.054 Sum_probs=86.9
Q ss_pred CCCCCEEEEECCCCChhHHHHHHh-c-CCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcc
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETA-L-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~-~-~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~F 106 (357)
..++.+|||+|||+|..+..++.. + ..+++++|+|+.+++.|+++.+..+...++.++.+|+... + +.++|
T Consensus 110 ~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~------~~~~~ 182 (277)
T 1o54_A 110 VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-F------DEKDV 182 (277)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-C------SCCSE
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-c------cCCcc
Confidence 347889999999999888888776 3 5799999999999999999987654434789999998654 3 34689
Q ss_pred cEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCchHH
Q 018352 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTI 152 (357)
Q Consensus 107 DlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~i 152 (357)
|+|++... ....+++++.++|+|||++++.++..+.+
T Consensus 183 D~V~~~~~---------~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 219 (277)
T 1o54_A 183 DALFLDVP---------DPWNYIDKCWEALKGGGRFATVCPTTNQV 219 (277)
T ss_dssp EEEEECCS---------CGGGTHHHHHHHEEEEEEEEEEESSHHHH
T ss_pred CEEEECCc---------CHHHHHHHHHHHcCCCCEEEEEeCCHHHH
Confidence 99998431 23467999999999999999999876443
No 193
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.27 E-value=6.4e-11 Score=104.91 Aligned_cols=105 Identities=14% Similarity=0.069 Sum_probs=82.6
Q ss_pred CCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEE
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
.++.+|||+|||+|..+..++..+..+++|+|+|+.+++.|+++.+..+. +++++++|+.. + +.+||+|
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~--~-------~~~~D~v 116 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKG--KFKVFIGDVSE--F-------NSRVDIV 116 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTT--SEEEEESCGGG--C-------CCCCSEE
T ss_pred CCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC--CEEEEECchHH--c-------CCCCCEE
Confidence 36789999999999988888777666899999999999999999876644 78999999865 2 2489999
Q ss_pred EEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 110 ~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
++...+|. .. ......+++.+.++| ||.++..+++.
T Consensus 117 ~~~~p~~~-~~-~~~~~~~l~~~~~~l--~~~~~~~~~~~ 152 (207)
T 1wy7_A 117 IMNPPFGS-QR-KHADRPFLLKAFEIS--DVVYSIHLAKP 152 (207)
T ss_dssp EECCCCSS-SS-TTTTHHHHHHHHHHC--SEEEEEEECCH
T ss_pred EEcCCCcc-cc-CCchHHHHHHHHHhc--CcEEEEEeCCc
Confidence 99988776 32 123456788888888 67666654444
No 194
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.27 E-value=8.7e-12 Score=118.50 Aligned_cols=113 Identities=14% Similarity=0.040 Sum_probs=82.0
Q ss_pred CCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHh---cCCCceeEEEEcCCCCCchhhhhhhcCCc
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWEN---QRKNFIAEFFEADPCAENFETQMQEKANQ 105 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~---~~~~~~v~f~~~D~~~~~~~~~l~~~~~~ 105 (357)
+++.+|||||||+|..+..+++. +..+|+++|+|+.+++.|++++.. .....+++++.+|+..... ....++
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~----~~~~~~ 169 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVR----QTPDNT 169 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHH----SSCTTC
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHH----hccCCc
Confidence 46689999999999988888766 457999999999999999998742 1112368999999754221 002578
Q ss_pred ccEEEEccchhhccCCHHHH--HHHHHHHHhcccCCcEEEEEeCC
Q 018352 106 ADLVCCFQHLQMCFETEERA--RRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 106 FDlV~~~~~lh~~fes~~~~--~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
||+|++....+. . ..... ..+++++.++|||||++++...+
T Consensus 170 fDvIi~d~~~~~-~-~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 212 (304)
T 3bwc_A 170 YDVVIIDTTDPA-G-PASKLFGEAFYKDVLRILKPDGICCNQGES 212 (304)
T ss_dssp EEEEEEECC-----------CCHHHHHHHHHHEEEEEEEEEEECC
T ss_pred eeEEEECCCCcc-c-cchhhhHHHHHHHHHHhcCCCcEEEEecCC
Confidence 999999765544 1 11112 68899999999999999998655
No 195
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.27 E-value=2.3e-11 Score=118.49 Aligned_cols=98 Identities=18% Similarity=0.147 Sum_probs=80.7
Q ss_pred CCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
.+..+|||||||+|..+..+++. +..+++++|+ +.+++.|+++ .+++|+.+|+.. ++ +.+ |+
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~-~~------p~~--D~ 264 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF-------SGVEHLGGDMFD-GV------PKG--DA 264 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTT-CC------CCC--SE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc-------CCCEEEecCCCC-CC------CCC--CE
Confidence 35689999999999988888776 4568999999 8888776532 268999999876 44 323 99
Q ss_pred EEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEe
Q 018352 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~ 146 (357)
|++..++|+ + +.++..++|++++++|||||++++..
T Consensus 265 v~~~~vlh~-~-~~~~~~~~l~~~~~~L~pgG~l~i~e 300 (368)
T 3reo_A 265 IFIKWICHD-W-SDEHCLKLLKNCYAALPDHGKVIVAE 300 (368)
T ss_dssp EEEESCGGG-B-CHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEEechhhc-C-CHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 999999998 5 56678899999999999999999873
No 196
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.26 E-value=1.6e-11 Score=107.71 Aligned_cols=110 Identities=20% Similarity=0.106 Sum_probs=77.7
Q ss_pred CCCCCEEEEECCCCChhHHHHHHh-cC---------CeEEEEeCChHHHHHHHHHhHhcCCCceeEEE-EcCCCCCchhh
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETA-LI---------ANYIGIDVATSGIGEARDTWENQRKNFIAEFF-EADPCAENFET 97 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~-~~---------~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~-~~D~~~~~~~~ 97 (357)
+.++.+|||+|||+|..+..+++. +. .+++|+|+|+.+ . ..++.++ .+|+.......
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~---------~---~~~~~~~~~~d~~~~~~~~ 87 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF---------P---LEGATFLCPADVTDPRTSQ 87 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC---------C---CTTCEEECSCCTTSHHHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc---------c---CCCCeEEEeccCCCHHHHH
Confidence 567899999999999888888776 43 689999999842 0 1257888 89886643221
Q ss_pred hhh--hcCCcccEEEEccchhhccCCHHHH-------HHHHHHHHhcccCCcEEEEEeCCch
Q 018352 98 QMQ--EKANQADLVCCFQHLQMCFETEERA-------RRLLQNVSSLLKPGGYFLGITPDSS 150 (357)
Q Consensus 98 ~l~--~~~~~FDlV~~~~~lh~~fes~~~~-------~~~L~~i~~~LkpGG~fi~t~pd~~ 150 (357)
.+. ...++||+|+|..++|+......+. ..+++++.++|||||.|++.+....
T Consensus 88 ~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 149 (196)
T 2nyu_A 88 RILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGS 149 (196)
T ss_dssp HHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSG
T ss_pred HHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCc
Confidence 110 0235899999977655432111122 5789999999999999999876653
No 197
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.26 E-value=2.8e-11 Score=118.14 Aligned_cols=120 Identities=13% Similarity=0.057 Sum_probs=91.6
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhcC-CeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCccc
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETALI-ANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~~-~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FD 107 (357)
..++.+|||+|||+|..+..++.... .+++|+|+|+.|++.|+++.+..+...+++|.++|+...+. ..++||
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~------~~~~fD 288 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQ------YVDSVD 288 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGG------TCSCEE
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCc------ccCCcC
Confidence 56788999999999998888877643 48999999999999999999877654578999999877554 457899
Q ss_pred EEEEccchhhccC---CH-HHHHHHHHHHHhcccCCcEEEEEeCCchHHHHHH
Q 018352 108 LVCCFQHLQMCFE---TE-ERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKY 156 (357)
Q Consensus 108 lV~~~~~lh~~fe---s~-~~~~~~L~~i~~~LkpGG~fi~t~pd~~~i~~~~ 156 (357)
+|+|+..++.-.. .. +-...+++.+.++| ||.+++.+++...+.+.+
T Consensus 289 ~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~~~~~~~~~~ 339 (373)
T 3tm4_A 289 FAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITTEKKAIEEAI 339 (373)
T ss_dssp EEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEESCHHHHHHHH
T ss_pred EEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEECCHHHHHHHH
Confidence 9999765443221 12 22377899999988 777777788876665544
No 198
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.26 E-value=3e-11 Score=117.51 Aligned_cols=103 Identities=18% Similarity=0.194 Sum_probs=83.5
Q ss_pred HHHHc--CCCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhh
Q 018352 24 LIKIY--SHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQ 100 (357)
Q Consensus 24 Li~~~--~~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~ 100 (357)
++..+ ..+..+|||||||+|..+..+++. +..+++++|+ +.+++.|+++ .+++|+.+|+.. ++
T Consensus 192 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~D~~~-~~----- 257 (364)
T 3p9c_A 192 LLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF-------PGVTHVGGDMFK-EV----- 257 (364)
T ss_dssp HHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTT-CC-----
T ss_pred HHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc-------CCeEEEeCCcCC-CC-----
Confidence 44444 345789999999999988888776 4568999999 8888776532 269999999976 54
Q ss_pred hcCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 101 EKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 101 ~~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
+.+ |+|++..++|+ + +.++..++|++++++|||||++++.
T Consensus 258 -p~~--D~v~~~~vlh~-~-~d~~~~~~L~~~~~~L~pgG~l~i~ 297 (364)
T 3p9c_A 258 -PSG--DTILMKWILHD-W-SDQHCATLLKNCYDALPAHGKVVLV 297 (364)
T ss_dssp -CCC--SEEEEESCGGG-S-CHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred -CCC--CEEEehHHhcc-C-CHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 333 99999999998 5 5677889999999999999999987
No 199
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.26 E-value=4.1e-12 Score=120.15 Aligned_cols=99 Identities=10% Similarity=-0.009 Sum_probs=72.5
Q ss_pred CCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEE-EEcCCCCCchhhhhhhcCCcccEE
Q 018352 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEF-FEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f-~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
++.+|||+|||+|+++..+++.+..+|+|+|+|+.||+.+.++.. ++.. ...|+...... .+ +..+||+|
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~~------rv~~~~~~ni~~l~~~-~l--~~~~fD~v 155 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQDD------RVRSMEQYNFRYAEPV-DF--TEGLPSFA 155 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTCT------TEEEECSCCGGGCCGG-GC--TTCCCSEE
T ss_pred cccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCc------ccceecccCceecchh-hC--CCCCCCEE
Confidence 577999999999999988888877899999999999998544211 2222 22333222211 11 23459999
Q ss_pred EEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 110 ~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
+|..++|+ ...+|.+++++|||||.+++.
T Consensus 156 ~~d~sf~s-------l~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 156 SIDVSFIS-------LNLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp EECCSSSC-------GGGTHHHHHHHSCTTCEEEEE
T ss_pred EEEeeHhh-------HHHHHHHHHHHcCcCCEEEEE
Confidence 99887775 267899999999999999887
No 200
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.26 E-value=2.7e-11 Score=119.08 Aligned_cols=122 Identities=14% Similarity=0.096 Sum_probs=91.5
Q ss_pred HHHcCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCC-CceeEEEEcCCCCCchhhhhhhcC
Q 018352 25 IKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRK-NFIAEFFEADPCAENFETQMQEKA 103 (357)
Q Consensus 25 i~~~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~-~~~v~f~~~D~~~~~~~~~l~~~~ 103 (357)
+..+ .++.+|||+|||+|+.+..++..+..+|+|+|+|+.+++.|+++++.++. ..+++|+++|+... ...+....
T Consensus 215 l~~~-~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~--~~~~~~~~ 291 (396)
T 3c0k_A 215 TRRY-VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKL--LRTYRDRG 291 (396)
T ss_dssp HHHH-CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHH--HHHHHHTT
T ss_pred HHHh-hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHH--HHHHHhcC
Confidence 4444 46789999999999999888887777999999999999999999887755 33789999998552 11121124
Q ss_pred CcccEEEEccchh-----hccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 104 NQADLVCCFQHLQ-----MCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 104 ~~FDlV~~~~~lh-----~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
.+||+|++..... ..+........++.++.++|+|||++++++...
T Consensus 292 ~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 292 EKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSG 342 (396)
T ss_dssp CCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 6899999864221 112223557788999999999999999886543
No 201
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.26 E-value=2.1e-11 Score=118.66 Aligned_cols=104 Identities=19% Similarity=0.240 Sum_probs=83.7
Q ss_pred HHHHHc--CCCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhh
Q 018352 23 ALIKIY--SHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQM 99 (357)
Q Consensus 23 ~Li~~~--~~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l 99 (357)
.++..+ ..+..+|||||||+|..+..++.. +..+++++|+ +.+++.|++. .+++|+.+|+.. ++
T Consensus 199 ~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~-~~---- 265 (372)
T 1fp1_D 199 RMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL-------SGIEHVGGDMFA-SV---- 265 (372)
T ss_dssp HHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTT-CC----
T ss_pred HHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc-------CCCEEEeCCccc-CC----
Confidence 345554 346789999999999988888776 3458999999 9999877542 258999999976 44
Q ss_pred hhcCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 100 QEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 100 ~~~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
+ . ||+|++..++|+ + +.....++|++++++|||||++++.
T Consensus 266 --~-~-~D~v~~~~~lh~-~-~d~~~~~~l~~~~~~L~pgG~l~i~ 305 (372)
T 1fp1_D 266 --P-Q-GDAMILKAVCHN-W-SDEKCIEFLSNCHKALSPNGKVIIV 305 (372)
T ss_dssp --C-C-EEEEEEESSGGG-S-CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred --C-C-CCEEEEeccccc-C-CHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 2 2 999999999998 5 4555679999999999999999987
No 202
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.25 E-value=2.6e-11 Score=111.72 Aligned_cols=106 Identities=10% Similarity=0.035 Sum_probs=82.4
Q ss_pred CCCEEEEECCCCChhHHHHHHh-c-CCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh---cCCc
Q 018352 31 PYVTVCDLYCGAGVDVDKWETA-L-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE---KANQ 105 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~-~-~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~---~~~~ 105 (357)
+..+|||||||+|..+..++.. + ..+|+++|+|+.+++.|+++++..+...+++++++|+... ...+.. ..++
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~--l~~l~~~~~~~~~ 156 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPV--LDEMIKDEKNHGS 156 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHH--HHHHHHSGGGTTC
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHH--HHHHHhccCCCCC
Confidence 4679999999999888887776 2 5799999999999999999988765555799999997541 111110 1478
Q ss_pred ccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 106 FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
||+|++.... .....+++++.++|||||++++.
T Consensus 157 fD~V~~d~~~-------~~~~~~l~~~~~~LkpGG~lv~d 189 (247)
T 1sui_A 157 YDFIFVDADK-------DNYLNYHKRLIDLVKVGGVIGYD 189 (247)
T ss_dssp BSEEEECSCS-------TTHHHHHHHHHHHBCTTCCEEEE
T ss_pred EEEEEEcCch-------HHHHHHHHHHHHhCCCCeEEEEe
Confidence 9999986532 23567899999999999999986
No 203
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.24 E-value=2.4e-11 Score=113.54 Aligned_cols=104 Identities=15% Similarity=0.025 Sum_probs=84.4
Q ss_pred cCCCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcc
Q 018352 28 YSHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (357)
Q Consensus 28 ~~~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~F 106 (357)
.+.++.+|||+|||+|..+..++.. +..+|+|+|+|+.+++.|+++.+.++.. ++.|+++|+... - ..++|
T Consensus 116 ~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~-~~~~~~~d~~~~-~------~~~~~ 187 (272)
T 3a27_A 116 ISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLN-NVIPILADNRDV-E------LKDVA 187 (272)
T ss_dssp SCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCS-SEEEEESCGGGC-C------CTTCE
T ss_pred hcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEECChHHc-C------ccCCc
Confidence 3567889999999999998888776 4569999999999999999998876543 578999998764 1 14689
Q ss_pred cEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeC
Q 018352 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (357)
Q Consensus 107 DlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~p 147 (357)
|+|++.... ....++..+.+.|+|||+++++..
T Consensus 188 D~Vi~d~p~--------~~~~~l~~~~~~LkpgG~l~~s~~ 220 (272)
T 3a27_A 188 DRVIMGYVH--------KTHKFLDKTFEFLKDRGVIHYHET 220 (272)
T ss_dssp EEEEECCCS--------SGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred eEEEECCcc--------cHHHHHHHHHHHcCCCCEEEEEEc
Confidence 999987643 244578899999999999997743
No 204
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.24 E-value=2.3e-11 Score=119.77 Aligned_cols=120 Identities=11% Similarity=0.024 Sum_probs=87.7
Q ss_pred HHHHHHcCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh
Q 018352 22 TALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE 101 (357)
Q Consensus 22 s~Li~~~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~ 101 (357)
..++..++.++.+|||+|||+|+.+..++..+. .|+|+|+|+.+++.|+++.+.++.. ..+.++|+... +..
T Consensus 205 r~~l~~~~~~g~~VLDlg~GtG~~sl~~a~~ga-~V~avDis~~al~~a~~n~~~ng~~--~~~~~~D~~~~-----l~~ 276 (393)
T 4dmg_A 205 RRLFEAMVRPGERVLDVYSYVGGFALRAARKGA-YALAVDKDLEALGVLDQAALRLGLR--VDIRHGEALPT-----LRG 276 (393)
T ss_dssp HHHHHTTCCTTCEEEEESCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCC--CEEEESCHHHH-----HHT
T ss_pred HHHHHHHhcCCCeEEEcccchhHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHHHhCCC--CcEEEccHHHH-----HHH
Confidence 445666777789999999999999988887766 4999999999999999998877543 35668887541 111
Q ss_pred cCCcccEEEEccch-h----hccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 102 KANQADLVCCFQHL-Q----MCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 102 ~~~~FDlV~~~~~l-h----~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
..+.||+|++.... + ..+........++..+.++|+|||+++..+.+.
T Consensus 277 ~~~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~ 329 (393)
T 4dmg_A 277 LEGPFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSY 329 (393)
T ss_dssp CCCCEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred hcCCCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 12449999986432 1 001113455789999999999999999775544
No 205
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.24 E-value=3.5e-11 Score=109.51 Aligned_cols=107 Identities=14% Similarity=0.053 Sum_probs=81.9
Q ss_pred CCCEEEEECCCCChhHHHHHHh-c-CCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcC--Ccc
Q 018352 31 PYVTVCDLYCGAGVDVDKWETA-L-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKA--NQA 106 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~-~-~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~--~~F 106 (357)
++.+|||+|||+|..+..++.. + ..+|+++|+|+.+++.|+++++..+...+++++++|+.. ....+...+ ++|
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~--~l~~l~~~~~~~~f 149 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALA--TLEQLTQGKPLPEF 149 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH--HHHHHHTSSSCCCE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH--HHHHHHhcCCCCCc
Confidence 4679999999999888777665 2 469999999999999999998766554478999998743 111121122 789
Q ss_pred cEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEe
Q 018352 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 107 DlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~ 146 (357)
|+|++.... .....+++++.++|+|||++++..
T Consensus 150 D~V~~d~~~-------~~~~~~l~~~~~~LkpgG~lv~~~ 182 (232)
T 3cbg_A 150 DLIFIDADK-------RNYPRYYEIGLNLLRRGGLMVIDN 182 (232)
T ss_dssp EEEEECSCG-------GGHHHHHHHHHHTEEEEEEEEEEC
T ss_pred CEEEECCCH-------HHHHHHHHHHHHHcCCCeEEEEeC
Confidence 999986532 235678999999999999999873
No 206
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.24 E-value=2.5e-11 Score=114.30 Aligned_cols=104 Identities=13% Similarity=0.088 Sum_probs=78.7
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
..++.+|||+|||+|..+..++..+ .+|+|+|+|+.|++.|+++....+...+++++++|+...++ .+||+
T Consensus 26 ~~~~~~VLDiG~G~G~lt~~L~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~--------~~fD~ 96 (285)
T 1zq9_A 26 LRPTDVVLEVGPGTGNMTVKLLEKA-KKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDL--------PFFDT 96 (285)
T ss_dssp CCTTCEEEEECCTTSTTHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCC--------CCCSE
T ss_pred CCCCCEEEEEcCcccHHHHHHHhhC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccc--------hhhcE
Confidence 3467899999999999988887765 49999999999999999988654333478999999987554 37999
Q ss_pred EEEccchhhccCCHHHHHHHHH--------------HH--HhcccCCcEEEE
Q 018352 109 VCCFQHLQMCFETEERARRLLQ--------------NV--SSLLKPGGYFLG 144 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~--------------~i--~~~LkpGG~fi~ 144 (357)
|+++..+|+ +.+....++. ++ +++|+|||.+++
T Consensus 97 vv~nlpy~~---~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y~ 145 (285)
T 1zq9_A 97 CVANLPYQI---SSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLYC 145 (285)
T ss_dssp EEEECCGGG---HHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTCS
T ss_pred EEEecCccc---chHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCcccc
Confidence 999877766 2233333332 23 358999998753
No 207
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.24 E-value=2.8e-11 Score=107.30 Aligned_cols=108 Identities=14% Similarity=0.105 Sum_probs=76.9
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh--c---C
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--K---A 103 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~--~---~ 103 (357)
..++.+|||||||+|+.+..+++. ..+|+|+|+++.. ...++.|+++|+........+.. . .
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~~------------~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEME------------EIAGVRFIRCDIFKETIFDDIDRALREEGI 89 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCCC------------CCTTCEEEECCTTSSSHHHHHHHHHHHHTC
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc-CCcEEEEeccccc------------cCCCeEEEEccccCHHHHHHHHHHhhcccC
Confidence 467899999999999888877666 6699999999742 11268999999988654322211 1 1
Q ss_pred CcccEEEEccchhhc----c---CCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 104 NQADLVCCFQHLQMC----F---ETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 104 ~~FDlV~~~~~lh~~----f---es~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
++||+|+|....... . .+.+....+++.+.++|||||.|++.+...
T Consensus 90 ~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~ 142 (191)
T 3dou_A 90 EKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQG 142 (191)
T ss_dssp SSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred CcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCC
Confidence 489999996532211 1 112334678999999999999999876544
No 208
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.23 E-value=1.1e-11 Score=113.37 Aligned_cols=101 Identities=15% Similarity=0.111 Sum_probs=76.2
Q ss_pred CCCEEEEECCCCChhHHHHHHh-----cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCc
Q 018352 31 PYVTVCDLYCGAGVDVDKWETA-----LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQ 105 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~-----~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~ 105 (357)
++.+|||||||+|..+..++.. +..+|+|+|+|+.|++.|+. . ..+++++++|+........+ ...+
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~----~--~~~v~~~~gD~~~~~~l~~~--~~~~ 152 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS----D--MENITLHQGDCSDLTTFEHL--REMA 152 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG----G--CTTEEEEECCSSCSGGGGGG--SSSC
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc----c--CCceEEEECcchhHHHHHhh--ccCC
Confidence 4579999999999888887765 35799999999999998862 1 13699999999764211111 2247
Q ss_pred ccEEEEccchhhccCCHHHHHHHHHHHHh-cccCCcEEEEEe
Q 018352 106 ADLVCCFQHLQMCFETEERARRLLQNVSS-LLKPGGYFLGIT 146 (357)
Q Consensus 106 FDlV~~~~~lh~~fes~~~~~~~L~~i~~-~LkpGG~fi~t~ 146 (357)
||+|++..+ |. +...++.++.+ +|||||++++..
T Consensus 153 fD~I~~d~~-~~------~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 153 HPLIFIDNA-HA------NTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp SSEEEEESS-CS------SHHHHHHHHHHHTCCTTCEEEECS
T ss_pred CCEEEECCc-hH------hHHHHHHHHHHhhCCCCCEEEEEe
Confidence 999988654 32 35678999997 999999999864
No 209
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.23 E-value=1.7e-11 Score=112.55 Aligned_cols=114 Identities=10% Similarity=0.033 Sum_probs=76.6
Q ss_pred CCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhc-CCcccE
Q 018352 31 PYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEK-ANQADL 108 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~-~~~FDl 108 (357)
++.+|||+|||+|..+..++.. +..+++|+|+|+.|++.|+++.+..+...+++|+++|+...-+ ..+... +++||+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~~~~~~fD~ 143 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLM-DALKEESEIIYDF 143 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSST-TTSTTCCSCCBSE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhh-hhhhcccCCcccE
Confidence 4679999999999877777665 3569999999999999999998876554469999999765211 011101 258999
Q ss_pred EEEccchhhccCC-----------HHHHHHHHHHHHhcccCCcEEEEE
Q 018352 109 VCCFQHLQMCFET-----------EERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 109 V~~~~~lh~~fes-----------~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
|+|+..+|..-.. .+....++.+++++|||||.+.+.
T Consensus 144 i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~ 191 (254)
T 2h00_A 144 CMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFV 191 (254)
T ss_dssp EEECCCCC-------------------------CTTTTHHHHTHHHHH
T ss_pred EEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEE
Confidence 9998655541100 011235678899999999987654
No 210
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.23 E-value=3.5e-11 Score=108.34 Aligned_cols=106 Identities=13% Similarity=0.113 Sum_probs=81.8
Q ss_pred CCCEEEEECCCCChhHHHHHHh-c-CCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcC--Ccc
Q 018352 31 PYVTVCDLYCGAGVDVDKWETA-L-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKA--NQA 106 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~-~-~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~--~~F 106 (357)
++.+|||+|||+|..+..++.. + ..+|+++|+|+.+++.|+++++..+...+++++++|+... ...+.... ++|
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~--~~~~~~~~~~~~~ 146 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALET--LDELLAAGEAGTF 146 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHH--HHHHHHTTCTTCE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHH--HHHHHhcCCCCCc
Confidence 5689999999999888877765 2 5799999999999999999987765545799999987431 11121111 689
Q ss_pred cEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 107 DlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
|+|++.... .....+++++.++|+|||++++.
T Consensus 147 D~v~~d~~~-------~~~~~~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 147 DVAVVDADK-------ENCSAYYERCLQLLRPGGILAVL 178 (229)
T ss_dssp EEEEECSCS-------TTHHHHHHHHHHHEEEEEEEEEE
T ss_pred cEEEECCCH-------HHHHHHHHHHHHHcCCCeEEEEE
Confidence 999986532 23457899999999999999986
No 211
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.22 E-value=8.6e-11 Score=113.80 Aligned_cols=103 Identities=23% Similarity=0.297 Sum_probs=85.8
Q ss_pred CCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEE
Q 018352 31 PYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
...+|||||||+|..+..+++. +..+++..|. +.+++.|+++..... ..+++|+.+|.+..+. ..+|+|
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~-~~rv~~~~gD~~~~~~--------~~~D~~ 248 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQE-EEQIDFQEGDFFKDPL--------PEADLY 248 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC---CCSEEEEESCTTTSCC--------CCCSEE
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcc-cCceeeecCccccCCC--------CCceEE
Confidence 4679999999999999888876 5558889997 789999998875432 3479999999876543 458999
Q ss_pred EEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 110 ~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
++..++|+ + +.++..++|+++++.|+|||++++.
T Consensus 249 ~~~~vlh~-~-~d~~~~~iL~~~~~al~pgg~lli~ 282 (353)
T 4a6d_A 249 ILARVLHD-W-ADGKCSHLLERIYHTCKPGGGILVI 282 (353)
T ss_dssp EEESSGGG-S-CHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred Eeeeeccc-C-CHHHHHHHHHHHHhhCCCCCEEEEE
Confidence 99999998 6 5677889999999999999999987
No 212
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.22 E-value=5.7e-11 Score=108.56 Aligned_cols=107 Identities=10% Similarity=-0.001 Sum_probs=83.2
Q ss_pred CCCEEEEECCCCChhHHHHHHh-c-CCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh---cCCc
Q 018352 31 PYVTVCDLYCGAGVDVDKWETA-L-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE---KANQ 105 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~-~-~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~---~~~~ 105 (357)
+..+|||||||+|..+..++.. + ..+++++|+|+.+++.|+++++..+...+++++++|+... ...+.. ..++
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~--l~~l~~~~~~~~~ 147 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLA--LDNLLQGQESEGS 147 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHH--HHHHHHSTTCTTC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH--HHHHHhccCCCCC
Confidence 4679999999999888888776 3 5799999999999999999988765555799999997541 111111 1478
Q ss_pred ccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEe
Q 018352 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 106 FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~ 146 (357)
||+|++.... .....+++++.++|+|||++++..
T Consensus 148 fD~I~~d~~~-------~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 148 YDFGFVDADK-------PNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEEEEECSCG-------GGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cCEEEECCch-------HHHHHHHHHHHHhcCCCeEEEEec
Confidence 9999886422 235678999999999999999873
No 213
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.21 E-value=6.9e-12 Score=117.12 Aligned_cols=112 Identities=15% Similarity=0.076 Sum_probs=76.4
Q ss_pred HcCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHh-HhcCCCceeEEE--EcCCCCCchhhhhhhcC
Q 018352 27 IYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTW-ENQRKNFIAEFF--EADPCAENFETQMQEKA 103 (357)
Q Consensus 27 ~~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~-~~~~~~~~v~f~--~~D~~~~~~~~~l~~~~ 103 (357)
.++.++.+|||||||+|+.+..++.. .+|+|+|+|+ |+..++++. .......++.|+ ++|+.. + ++
T Consensus 70 ~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~--l------~~ 138 (265)
T 2oxt_A 70 GYVELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHT--L------PV 138 (265)
T ss_dssp TSCCCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTT--S------CC
T ss_pred CCCCCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhH--C------CC
Confidence 34567889999999999888777665 6999999998 543332211 001111267888 899876 3 34
Q ss_pred CcccEEEEccchhhccCC-HHHH--HHHHHHHHhcccCCc--EEEEEe--CCch
Q 018352 104 NQADLVCCFQHLQMCFET-EERA--RRLLQNVSSLLKPGG--YFLGIT--PDSS 150 (357)
Q Consensus 104 ~~FDlV~~~~~lh~~fes-~~~~--~~~L~~i~~~LkpGG--~fi~t~--pd~~ 150 (357)
++||+|+|..+ ++.-.. .+.. ..+|+.+.++||||| .|++.+ |...
T Consensus 139 ~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~~~~~ 191 (265)
T 2oxt_A 139 ERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLCPYSV 191 (265)
T ss_dssp CCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESCTTSH
T ss_pred CCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCCCCCh
Confidence 78999999877 442111 1112 138899999999999 999876 4444
No 214
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.21 E-value=3.6e-11 Score=115.98 Aligned_cols=98 Identities=15% Similarity=0.128 Sum_probs=81.0
Q ss_pred CCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
.+..+|||||||+|..+..+++. +..+++|+|+ +.+++.|++. .+++|+.+|+.. ++ + .||+
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~-~~------p--~~D~ 249 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS-------NNLTYVGGDMFT-SI------P--NADA 249 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB-------TTEEEEECCTTT-CC------C--CCSE
T ss_pred ccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC-------CCcEEEeccccC-CC------C--CccE
Confidence 45689999999999988888776 4568999999 9999877641 148999999876 44 2 3999
Q ss_pred EEEccchhhccCCHHHHHHHHHHHHhcccC---CcEEEEEe
Q 018352 109 VCCFQHLQMCFETEERARRLLQNVSSLLKP---GGYFLGIT 146 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~i~~~Lkp---GG~fi~t~ 146 (357)
|++..++|+ + +..+..++|++++++||| ||++++..
T Consensus 250 v~~~~~lh~-~-~d~~~~~~l~~~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 250 VLLKYILHN-W-TDKDCLRILKKCKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp EEEESCGGG-S-CHHHHHHHHHHHHHHHSGGGCCCEEEEEE
T ss_pred EEeehhhcc-C-CHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 999999998 5 455567999999999999 99999874
No 215
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.20 E-value=2.9e-11 Score=110.69 Aligned_cols=100 Identities=11% Similarity=0.020 Sum_probs=68.1
Q ss_pred CCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEE-EcCCCCCchhhhhhhcCCcccEE
Q 018352 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFF-EADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~-~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
++.+|||||||+|..+..+++.+..+|+|+|+|+.||+.|+++.... ... ..++...... .+ ....||.+
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~------~~~~~~~~~~~~~~-~~--~~~~~d~~ 107 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERV------VVMEQFNFRNAVLA-DF--EQGRPSFT 107 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTE------EEECSCCGGGCCGG-GC--CSCCCSEE
T ss_pred CCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCccc------cccccceEEEeCHh-Hc--CcCCCCEE
Confidence 46799999999999998888887679999999999999987654321 111 1111111100 00 11236666
Q ss_pred EEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEe
Q 018352 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 110 ~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~ 146 (357)
++..++.. ...++++++++|||||+|++.+
T Consensus 108 ~~D~v~~~-------l~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 108 SIDVSFIS-------LDLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp EECCSSSC-------GGGTHHHHHHHSCTTCEEEEEE
T ss_pred EEEEEhhh-------HHHHHHHHHHhccCCCEEEEEE
Confidence 66554433 1578999999999999999875
No 216
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.20 E-value=1.9e-11 Score=115.73 Aligned_cols=113 Identities=18% Similarity=0.047 Sum_probs=81.2
Q ss_pred CCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHh--cCC-CceeEEEEcCCCCCchhhhhhhcCCc
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWEN--QRK-NFIAEFFEADPCAENFETQMQEKANQ 105 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~--~~~-~~~v~f~~~D~~~~~~~~~l~~~~~~ 105 (357)
+.+.+|||||||+|..+..+++. +..+|+++|+|+.+++.|++++.. ... ..+++++.+|+... +....++
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~-----l~~~~~~ 163 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEY-----VRKFKNE 163 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHH-----GGGCSSC
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHH-----HhhCCCC
Confidence 45689999999999888888776 567999999999999999998753 111 23689999997431 1113478
Q ss_pred ccEEEEccchhhccCCHH--HHHHHHHHHHhcccCCcEEEEEeCC
Q 018352 106 ADLVCCFQHLQMCFETEE--RARRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 106 FDlV~~~~~lh~~fes~~--~~~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
||+|++....++ ..... ....+++++.++|+|||++++.+.+
T Consensus 164 fD~Ii~d~~~~~-~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 207 (296)
T 1inl_A 164 FDVIIIDSTDPT-AGQGGHLFTEEFYQACYDALKEDGVFSAETED 207 (296)
T ss_dssp EEEEEEEC-----------CCSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred ceEEEEcCCCcc-cCchhhhhHHHHHHHHHHhcCCCcEEEEEccC
Confidence 999998653331 11111 1267899999999999999998654
No 217
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.20 E-value=4.8e-11 Score=125.64 Aligned_cols=113 Identities=15% Similarity=0.118 Sum_probs=89.6
Q ss_pred CCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCC-ceeEEEEcCCCCCchhhhhhhcCCcccEE
Q 018352 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKN-FIAEFFEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~-~~v~f~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
++.+|||+|||+|+.+..++..+..+|+++|+|+.+++.|+++++.++.. .+++|+++|+... +....++||+|
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~-----l~~~~~~fD~I 613 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAW-----LREANEQFDLI 613 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHH-----HHHCCCCEEEE
T ss_pred CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHH-----HHhcCCCccEE
Confidence 57899999999999988888777778999999999999999999877654 4699999998551 11135789999
Q ss_pred EEccchh-------hccCCHHHHHHHHHHHHhcccCCcEEEEEeCC
Q 018352 110 CCFQHLQ-------MCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 110 ~~~~~lh-------~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
++..... ..+........+++.+.++|+|||++++.+..
T Consensus 614 i~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 614 FIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp EECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 9854210 01333567788999999999999999987655
No 218
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.20 E-value=8e-11 Score=113.44 Aligned_cols=109 Identities=23% Similarity=0.273 Sum_probs=86.2
Q ss_pred CCCEEEEECCCCChhHHHHHHhcC------CeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCC
Q 018352 31 PYVTVCDLYCGAGVDVDKWETALI------ANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKAN 104 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~~~------~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~ 104 (357)
++.+|||+|||+|+.+..++.... .+++|+|+++.+++.|+.+....+. ++.+.++|..... ...
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~--~~~i~~~D~l~~~-------~~~ 200 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ--KMTLLHQDGLANL-------LVD 200 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC--CCEEEESCTTSCC-------CCC
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC--CceEEECCCCCcc-------ccC
Confidence 567999999999998887766521 5899999999999999998765543 6789999986632 247
Q ss_pred cccEEEEccchhhccCCHHHH---------------HHHHHHHHhcccCCcEEEEEeCCc
Q 018352 105 QADLVCCFQHLQMCFETEERA---------------RRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 105 ~FDlV~~~~~lh~~fes~~~~---------------~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
+||+|+++..++| +...+.. ..+++.+.+.|+|||++++.+|++
T Consensus 201 ~fD~Ii~NPPfg~-~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~ 259 (344)
T 2f8l_A 201 PVDVVISDLPVGY-YPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDA 259 (344)
T ss_dssp CEEEEEEECCCSE-ESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGG
T ss_pred CccEEEECCCCCC-cCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECch
Confidence 8999999988776 4333221 368999999999999999998664
No 219
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.20 E-value=3.3e-11 Score=117.97 Aligned_cols=120 Identities=13% Similarity=0.100 Sum_probs=89.5
Q ss_pred HHHHcCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcC
Q 018352 24 LIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKA 103 (357)
Q Consensus 24 Li~~~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~ 103 (357)
++..+ ++.+|||+|||+|..+..++.. ..+|+|+|+|+.+++.|+++.+.++.. +++|+++|+... ...+....
T Consensus 204 ~~~~~--~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~-~~~~~~~d~~~~--~~~~~~~~ 277 (382)
T 1wxx_A 204 YMERF--RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGLG-NVRVLEANAFDL--LRRLEKEG 277 (382)
T ss_dssp HGGGC--CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCT-TEEEEESCHHHH--HHHHHHTT
T ss_pred HHHhc--CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCC-CceEEECCHHHH--HHHHHhcC
Confidence 44454 6789999999999988888777 669999999999999999998876543 389999997542 11111125
Q ss_pred CcccEEEEccchh-----hccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 104 NQADLVCCFQHLQ-----MCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 104 ~~FDlV~~~~~lh-----~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
.+||+|++..... ..+........++.++.++|+|||++++++...
T Consensus 278 ~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 278 ERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSH 328 (382)
T ss_dssp CCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCeeEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 7899999854211 111123556789999999999999999886654
No 220
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.19 E-value=6.2e-12 Score=108.93 Aligned_cols=93 Identities=11% Similarity=0.058 Sum_probs=73.5
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
++++.+|||+|||. +++|+|+.|++.|+++... +++|.++|+...++. ...+++||+
T Consensus 10 ~~~g~~vL~~~~g~---------------v~vD~s~~ml~~a~~~~~~-----~~~~~~~d~~~~~~~---~~~~~~fD~ 66 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS---------------SPVEALKGLVDKLQALTGN-----EGRVSVENIKQLLQS---AHKESSFDI 66 (176)
T ss_dssp CCTTSEEEEEECTT---------------SCHHHHHHHHHHHHHHTTT-----TSEEEEEEGGGGGGG---CCCSSCEEE
T ss_pred CCCCCEEEEecCCc---------------eeeeCCHHHHHHHHHhccc-----CcEEEEechhcCccc---cCCCCCEeE
Confidence 56889999999996 2499999999999998743 378899998764431 003578999
Q ss_pred EEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeC
Q 018352 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~p 147 (357)
|+|.+++||+-.+ ..+++++++++|||||+|++..|
T Consensus 67 V~~~~~l~~~~~~---~~~~l~~~~r~LkpgG~l~~~~~ 102 (176)
T 2ld4_A 67 ILSGLVPGSTTLH---SAEILAEIARILRPGGCLFLKEP 102 (176)
T ss_dssp EEECCSTTCCCCC---CHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEECChhhhcccC---HHHHHHHHHHHCCCCEEEEEEcc
Confidence 9999999993133 46789999999999999998533
No 221
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.19 E-value=1.6e-11 Score=126.25 Aligned_cols=117 Identities=16% Similarity=0.078 Sum_probs=81.5
Q ss_pred HcCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcc
Q 018352 27 IYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (357)
Q Consensus 27 ~~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~F 106 (357)
+.+..+.+|||||||.|..+..+++.+. .|+|||+|+.+|+.|+.+....+. .+++|.++|+.+.. ... .+++|
T Consensus 62 ~~~~~~~~vLDvGCG~G~~~~~la~~ga-~V~giD~~~~~i~~a~~~a~~~~~-~~~~~~~~~~~~~~--~~~--~~~~f 135 (569)
T 4azs_A 62 RALGRPLNVLDLGCAQGFFSLSLASKGA-TIVGIDFQQENINVCRALAEENPD-FAAEFRVGRIEEVI--AAL--EEGEF 135 (569)
T ss_dssp HHHTSCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTSTT-SEEEEEECCHHHHH--HHC--CTTSC
T ss_pred hhcCCCCeEEEECCCCcHHHHHHHhCCC-EEEEECCCHHHHHHHHHHHHhcCC-CceEEEECCHHHHh--hhc--cCCCc
Confidence 3345678999999999977777766665 899999999999999998876532 37899999875421 111 35789
Q ss_pred cEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE-eCCchH
Q 018352 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI-TPDSST 151 (357)
Q Consensus 107 DlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t-~pd~~~ 151 (357)
|+|+|..++||+ .+.. ....+..+.+.|+++|..++. +..++.
T Consensus 136 D~v~~~e~~ehv-~~~~-~~~~~~~~~~tl~~~~~~~~~~~~~~e~ 179 (569)
T 4azs_A 136 DLAIGLSVFHHI-VHLH-GIDEVKRLLSRLADVTQAVILELAVKEE 179 (569)
T ss_dssp SEEEEESCHHHH-HHHH-CHHHHHHHHHHHHHHSSEEEEECCCTTS
T ss_pred cEEEECcchhcC-CCHH-HHHHHHHHHHHhccccceeeEEeccccc
Confidence 999999999983 2222 122344566677777755444 444333
No 222
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.19 E-value=2.2e-11 Score=114.41 Aligned_cols=108 Identities=14% Similarity=0.100 Sum_probs=81.1
Q ss_pred CCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhc--C--------CCceeEEEEcCCCCCchhhhh
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQ--R--------KNFIAEFFEADPCAENFETQM 99 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~--~--------~~~~v~f~~~D~~~~~~~~~l 99 (357)
+.+.+|||||||+|..+..+++.+..+++++|+++.+++.|++++ .. . ...+++++.+|+.. + +
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~--~---l 147 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFE--F---I 147 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHH--H---H
T ss_pred CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHH--H---h
Confidence 456899999999998888887776679999999999999999987 22 1 12368999998743 1 1
Q ss_pred hhcCCcccEEEEccchhhccCCHHH--HHHHHHHHHhcccCCcEEEEEe
Q 018352 100 QEKANQADLVCCFQHLQMCFETEER--ARRLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 100 ~~~~~~FDlV~~~~~lh~~fes~~~--~~~~L~~i~~~LkpGG~fi~t~ 146 (357)
.. .++||+|++....+. ..... ...+++++.++|+|||++++.+
T Consensus 148 ~~-~~~fD~Ii~d~~~~~--~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 148 KN-NRGFDVIIADSTDPV--GPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp HH-CCCEEEEEEECCCCC-------TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred cc-cCCeeEEEECCCCCC--CcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 11 478999998765432 11122 2678999999999999999874
No 223
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.18 E-value=3.7e-11 Score=114.27 Aligned_cols=112 Identities=12% Similarity=0.025 Sum_probs=80.3
Q ss_pred CCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHh--cCC-CceeEEEEcCCCCCchhhhhhhcCCc
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWEN--QRK-NFIAEFFEADPCAENFETQMQEKANQ 105 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~--~~~-~~~v~f~~~D~~~~~~~~~l~~~~~~ 105 (357)
+...+|||||||+|..+..+++. +..+++++|+++.+++.|++++.. ... ..+++++.+|+.. + +....++
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~--~---l~~~~~~ 168 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFE--F---MKQNQDA 168 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHH--H---HHTCSSC
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHH--H---HhhCCCC
Confidence 45689999999999888888766 457999999999999999998754 111 2368999998743 1 1113578
Q ss_pred ccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEe
Q 018352 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 106 FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~ 146 (357)
||+|++....+...........+++++.++|+|||++++..
T Consensus 169 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 169 FDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp EEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred ceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 99999876544311001123578999999999999999875
No 224
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.18 E-value=3e-11 Score=115.34 Aligned_cols=112 Identities=14% Similarity=0.064 Sum_probs=83.2
Q ss_pred CCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhc-C--C-CceeEEEEcCCCCCchhhhhhhcCC
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQ-R--K-NFIAEFFEADPCAENFETQMQEKAN 104 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~-~--~-~~~v~f~~~D~~~~~~~~~l~~~~~ 104 (357)
+...+|||||||+|..+..+++. +..+++++|+++.+++.|++++... . . ..+++++.+|+... +....+
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~-----l~~~~~ 150 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAY-----LERTEE 150 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHH-----HHHCCC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHH-----HHhcCC
Confidence 45689999999999888888766 4679999999999999999987541 1 1 23789999997541 111357
Q ss_pred cccEEEEccchhhccCC-HHH--HHHHHHHHHhcccCCcEEEEEe
Q 018352 105 QADLVCCFQHLQMCFET-EER--ARRLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 105 ~FDlV~~~~~lh~~fes-~~~--~~~~L~~i~~~LkpGG~fi~t~ 146 (357)
+||+|++....|..... ... ...+++++.++|+|||++++..
T Consensus 151 ~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 151 RYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp CEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred CccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 89999997655441001 111 3678999999999999999874
No 225
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.18 E-value=3.3e-11 Score=114.77 Aligned_cols=108 Identities=16% Similarity=0.058 Sum_probs=74.2
Q ss_pred cCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeC----ChHHHHHHHHHhHhcCCCceeEEEEc-CCCCCchhhhhhhc
Q 018352 28 YSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDV----ATSGIGEARDTWENQRKNFIAEFFEA-DPCAENFETQMQEK 102 (357)
Q Consensus 28 ~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDi----S~~~l~~A~~r~~~~~~~~~v~f~~~-D~~~~~~~~~l~~~ 102 (357)
++.++.+|||||||+|+.+..+++. ++|+|+|+ ++.+++.+. .+..+ ..++.|+++ |+...+
T Consensus 79 ~~~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~~--~~~~~-~~~v~~~~~~D~~~l~-------- 145 (305)
T 2p41_A 79 LVTPEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPIP--MSTYG-WNLVRLQSGVDVFFIP-------- 145 (305)
T ss_dssp SSCCCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCCC--CCSTT-GGGEEEECSCCTTTSC--------
T ss_pred CCCCCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHHH--hhhcC-CCCeEEEeccccccCC--------
Confidence 4567889999999999888777665 58999999 565442111 01000 136889988 876532
Q ss_pred CCcccEEEEccchh---hccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 103 ANQADLVCCFQHLQ---MCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 103 ~~~FDlV~~~~~lh---~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
..+||+|+|..+++ +.. +......+|..+.++|||||.|++.+...
T Consensus 146 ~~~fD~V~sd~~~~~g~~~~-d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 146 PERCDTLLCDIGESSPNPTV-EAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp CCCCSEEEECCCCCCSSHHH-HHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred cCCCCEEEECCccccCcchh-hHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 36899999987653 211 11111258899999999999999987655
No 226
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.17 E-value=2.7e-10 Score=111.05 Aligned_cols=105 Identities=9% Similarity=-0.159 Sum_probs=83.2
Q ss_pred CCCEEEEECCCCChhHHHHHHhcC-CeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCC-CchhhhhhhcCCcccE
Q 018352 31 PYVTVCDLYCGAGVDVDKWETALI-ANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCA-ENFETQMQEKANQADL 108 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~~~-~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~-~~~~~~l~~~~~~FDl 108 (357)
++.+|||+| |+|..+..++..+. .+++|+|+|+.|++.|+++.+..+.. +++|+++|+.. .+.. ..++||+
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~l~~~-----~~~~fD~ 244 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYE-DIEIFTFDLRKPLPDY-----ALHKFDT 244 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCC-CEEEECCCTTSCCCTT-----TSSCBSE
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CEEEEEChhhhhchhh-----ccCCccE
Confidence 578999999 99988888877654 79999999999999999998876554 79999999976 2210 1368999
Q ss_pred EEEccchhhccCCHHHHHHHHHHHHhcccCCc-EEEEEeC
Q 018352 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGG-YFLGITP 147 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG-~fi~t~p 147 (357)
|++...++.. ....+++++.++||||| .+++.+.
T Consensus 245 Vi~~~p~~~~-----~~~~~l~~~~~~LkpgG~~~~~~~~ 279 (373)
T 2qm3_A 245 FITDPPETLE-----AIRAFVGRGIATLKGPRCAGYFGIT 279 (373)
T ss_dssp EEECCCSSHH-----HHHHHHHHHHHTBCSTTCEEEEEEC
T ss_pred EEECCCCchH-----HHHHHHHHHHHHcccCCeEEEEEEe
Confidence 9998765541 25889999999999999 4344443
No 227
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.17 E-value=2.8e-11 Score=113.42 Aligned_cols=114 Identities=12% Similarity=0.065 Sum_probs=83.5
Q ss_pred CCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhc--CC-CceeEEEEcCCCCCchhhhhhhcCCc
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQ--RK-NFIAEFFEADPCAENFETQMQEKANQ 105 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~--~~-~~~v~f~~~D~~~~~~~~~l~~~~~~ 105 (357)
+...+|||||||+|..+..+++. +..+++++|+++.+++.|++.+... .. ..+++++.+|+.. + +....++
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~--~---l~~~~~~ 148 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFM--H---IAKSENQ 148 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHH--H---HHTCCSC
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHH--H---HhhCCCC
Confidence 45689999999999888887776 5679999999999999999987431 11 2378999999753 1 1113578
Q ss_pred ccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCC
Q 018352 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 106 FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
||+|++....+......-....+++++.++|+|||++++.+.+
T Consensus 149 fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~ 191 (275)
T 1iy9_A 149 YDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDN 191 (275)
T ss_dssp EEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCC
T ss_pred eeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 9999996544321000001256899999999999999998644
No 228
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.17 E-value=7.8e-12 Score=117.47 Aligned_cols=109 Identities=19% Similarity=0.057 Sum_probs=74.8
Q ss_pred cCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhH-hcCCCceeEEE--EcCCCCCchhhhhhhcCC
Q 018352 28 YSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWE-NQRKNFIAEFF--EADPCAENFETQMQEKAN 104 (357)
Q Consensus 28 ~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~-~~~~~~~v~f~--~~D~~~~~~~~~l~~~~~ 104 (357)
.+.++.+|||||||+|+.+..++.. .+|+|+|+|+ |+..|+++.. ......++.|+ ++|+.. + +++
T Consensus 79 ~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~--l------~~~ 147 (276)
T 2wa2_A 79 GVELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTK--M------EPF 147 (276)
T ss_dssp SCCCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGG--C------CCC
T ss_pred CCCCCCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhh--C------CCC
Confidence 4457889999999999888777665 6999999998 6443322210 01112267888 888765 2 347
Q ss_pred cccEEEEccchhhccCC-HHHH--HHHHHHHHhcccCCc--EEEEEeCC
Q 018352 105 QADLVCCFQHLQMCFET-EERA--RRLLQNVSSLLKPGG--YFLGITPD 148 (357)
Q Consensus 105 ~FDlV~~~~~lh~~fes-~~~~--~~~L~~i~~~LkpGG--~fi~t~pd 148 (357)
+||+|+|..+ ++.-.. .+.. ..+|+.+.++||||| .|++.+..
T Consensus 148 ~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 148 QADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp CCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred CcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 8999999877 442111 1112 137899999999999 99887533
No 229
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.16 E-value=5.2e-11 Score=113.81 Aligned_cols=111 Identities=9% Similarity=0.063 Sum_probs=81.1
Q ss_pred CCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEEE
Q 018352 32 YVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (357)
Q Consensus 32 ~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~ 110 (357)
..+|||||||+|..+..+++. +..+++++|+++.+++.|++++... ...+++++++|+.. +.... ..++||+|+
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~-~~~rv~v~~~Da~~--~l~~~--~~~~fDvIi 164 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIP-RAPRVKIRVDDARM--VAESF--TPASRDVII 164 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCC-CTTTEEEEESCHHH--HHHTC--CTTCEEEEE
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhcccc-CCCceEEEECcHHH--HHhhc--cCCCCCEEE
Confidence 349999999999888888773 5569999999999999999987542 12378999999754 11111 247899999
Q ss_pred EccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeC
Q 018352 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (357)
Q Consensus 111 ~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~p 147 (357)
+....+......-....++++++++|+|||+|++...
T Consensus 165 ~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 165 RDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp ECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 8654332110000125789999999999999998754
No 230
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.15 E-value=7.1e-11 Score=113.86 Aligned_cols=113 Identities=13% Similarity=0.058 Sum_probs=81.4
Q ss_pred CCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhc--CC-CceeEEEEcCCCCCchhhhhhhcCCc
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQ--RK-NFIAEFFEADPCAENFETQMQEKANQ 105 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~--~~-~~~v~f~~~D~~~~~~~~~l~~~~~~ 105 (357)
+...+|||||||+|..+..+++. +..+|+++|+|+.+++.|++++... +. ..+++++++|+... + ... ..++
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~-l-~~~--~~~~ 194 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAF-L-KNA--AEGS 194 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHH-H-HTS--CTTC
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHH-H-Hhc--cCCC
Confidence 45689999999999888887765 3579999999999999999987542 11 23689999997541 1 000 2468
Q ss_pred ccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEe
Q 018352 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 106 FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~ 146 (357)
||+|++....+......-..+.+++++.++|+|||+|++..
T Consensus 195 fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 195 YDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp EEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 99999865422101000113689999999999999999873
No 231
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.15 E-value=6.2e-11 Score=111.40 Aligned_cols=106 Identities=14% Similarity=0.029 Sum_probs=86.5
Q ss_pred HHHcCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCC
Q 018352 25 IKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKAN 104 (357)
Q Consensus 25 i~~~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~ 104 (357)
+.....++.+|||+|||+|..+..++..+..+|+++|+++.+++.++++.+.++...+++++++|+.... ..+
T Consensus 119 i~~~~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~-------~~~ 191 (278)
T 3k6r_A 119 MAKVAKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP-------GEN 191 (278)
T ss_dssp HHHHCCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC-------CCS
T ss_pred HHHhcCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhc-------ccc
Confidence 4455778999999999999999888888878999999999999999999988877778999999987643 247
Q ss_pred cccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 105 ~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
.||.|++... ++ ...++..+.++||+||++.+.
T Consensus 192 ~~D~Vi~~~p-~~-------~~~~l~~a~~~lk~gG~ih~~ 224 (278)
T 3k6r_A 192 IADRILMGYV-VR-------THEFIPKALSIAKDGAIIHYH 224 (278)
T ss_dssp CEEEEEECCC-SS-------GGGGHHHHHHHEEEEEEEEEE
T ss_pred CCCEEEECCC-Cc-------HHHHHHHHHHHcCCCCEEEEE
Confidence 8999987642 22 234677788899999988654
No 232
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.15 E-value=3e-11 Score=115.78 Aligned_cols=112 Identities=14% Similarity=0.134 Sum_probs=83.1
Q ss_pred CCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhc--CC-CceeEEEEcCCCCCchhhhhhhcCCc
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQ--RK-NFIAEFFEADPCAENFETQMQEKANQ 105 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~--~~-~~~v~f~~~D~~~~~~~~~l~~~~~~ 105 (357)
+.+.+|||||||+|..+..+++. +..+++++|+|+.+++.|++++... .. ..+++++++|+... +....++
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~-----l~~~~~~ 189 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKF-----LENVTNT 189 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHH-----HHHCCSC
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHH-----HhhcCCC
Confidence 45689999999999888888766 4679999999999999999987641 11 23689999997431 1113578
Q ss_pred ccEEEEccchhhccCCHHHH--HHHHHHHHhcccCCcEEEEEeCC
Q 018352 106 ADLVCCFQHLQMCFETEERA--RRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 106 FDlV~~~~~lh~~fes~~~~--~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
||+|++...-++ ...... +.+++++.++|+|||++++...+
T Consensus 190 fDvIi~d~~~p~--~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 190 YDVIIVDSSDPI--GPAETLFNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp EEEEEEECCCSS--SGGGGGSSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ceEEEECCcCCC--CcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 999998653221 111111 68899999999999999997644
No 233
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.14 E-value=2.5e-10 Score=114.15 Aligned_cols=114 Identities=21% Similarity=0.194 Sum_probs=83.9
Q ss_pred CCCCEEEEECCCCChhHHHHHHh-c-CCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCccc
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETA-L-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~-~-~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FD 107 (357)
.++.+|||+|||+|+.+..++.. + ..+|+|+|+|+.+++.++++.+..+.. ++.++++|+...... + .+++||
T Consensus 258 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~~--~--~~~~fD 332 (450)
T 2yxl_A 258 KPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIK-IVKPLVKDARKAPEI--I--GEEVAD 332 (450)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCC-SEEEECSCTTCCSSS--S--CSSCEE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCC-cEEEEEcChhhcchh--h--ccCCCC
Confidence 47789999999999988888775 3 369999999999999999998765442 689999998764410 0 236899
Q ss_pred EEEEc-----c-chhh------cc--CCH----HHHHHHHHHHHhcccCCcEEEEEeCC
Q 018352 108 LVCCF-----Q-HLQM------CF--ETE----ERARRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 108 lV~~~-----~-~lh~------~f--es~----~~~~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
+|++. . .++. .. +.. .....+++++.++|||||+++.+++.
T Consensus 333 ~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs 391 (450)
T 2yxl_A 333 KVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCS 391 (450)
T ss_dssp EEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred EEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 99962 1 2221 00 000 11267899999999999999987654
No 234
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.13 E-value=1e-10 Score=111.83 Aligned_cols=110 Identities=12% Similarity=0.032 Sum_probs=79.2
Q ss_pred CCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhc--CC-CceeEEEEcCCCCCchhhhhhhcCCc
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQ--RK-NFIAEFFEADPCAENFETQMQEKANQ 105 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~--~~-~~~v~f~~~D~~~~~~~~~l~~~~~~ 105 (357)
+...+|||||||+|..+..+++. +..+|+++|+|+.+++.|++++... +. ..+++++.+|+... +....++
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~-----l~~~~~~ 181 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEF-----LKNHKNE 181 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHH-----HHHCTTC
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHH-----HHhcCCC
Confidence 45689999999999888887765 4579999999999999999987542 11 23689999987531 1113578
Q ss_pred ccEEEEccchhhccCCHHHH--HHHHHHHHhcccCCcEEEEEe
Q 018352 106 ADLVCCFQHLQMCFETEERA--RRLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 106 FDlV~~~~~lh~~fes~~~~--~~~L~~i~~~LkpGG~fi~t~ 146 (357)
||+|++....+. ...... ..+++++.++|+|||++++..
T Consensus 182 fD~Ii~d~~~~~--~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 182 FDVIITDSSDPV--GPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp EEEEEECCC---------------HHHHHHHHEEEEEEEEEEC
T ss_pred ceEEEEcCCCCC--CcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 999998664332 111111 689999999999999999885
No 235
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.13 E-value=2.2e-10 Score=110.76 Aligned_cols=97 Identities=16% Similarity=0.143 Sum_probs=79.6
Q ss_pred CCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEE
Q 018352 31 PYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
+..+|||||||+|..+..+++. +..+++++|+ +.+++.|++. .+++|+.+|+.. ++ + .||+|
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~-~~------~--~~D~v 255 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTGN-------ENLNFVGGDMFK-SI------P--SADAV 255 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCCC-------SSEEEEECCTTT-CC------C--CCSEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhcccC-------CCcEEEeCccCC-CC------C--CceEE
Confidence 5689999999999988888776 3458999999 7888766531 258999999876 44 2 49999
Q ss_pred EEccchhhccCCHHHHHHHHHHHHhcccC---CcEEEEEe
Q 018352 110 CCFQHLQMCFETEERARRLLQNVSSLLKP---GGYFLGIT 146 (357)
Q Consensus 110 ~~~~~lh~~fes~~~~~~~L~~i~~~Lkp---GG~fi~t~ 146 (357)
++..++|+ + +.++..++|++++++|+| ||++++..
T Consensus 256 ~~~~vlh~-~-~d~~~~~~l~~~~~~L~p~~~gG~l~i~e 293 (358)
T 1zg3_A 256 LLKWVLHD-W-NDEQSLKILKNSKEAISHKGKDGKVIIID 293 (358)
T ss_dssp EEESCGGG-S-CHHHHHHHHHHHHHHTGGGGGGCEEEEEE
T ss_pred EEcccccC-C-CHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 99999998 5 455567999999999999 99999873
No 236
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.13 E-value=3.9e-11 Score=112.87 Aligned_cols=112 Identities=14% Similarity=0.142 Sum_probs=83.7
Q ss_pred CCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcC---CCceeEEEEcCCCCCchhhhhhhcCCc
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQR---KNFIAEFFEADPCAENFETQMQEKANQ 105 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~---~~~~v~f~~~D~~~~~~~~~l~~~~~~ 105 (357)
+++.+|||||||+|..+..+++. +..+++++|+++.+++.|++++.... ...+++++.+|+... +....++
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~-----l~~~~~~ 151 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKF-----LENVTNT 151 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHH-----HHHCCSC
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHH-----HHhCCCC
Confidence 45689999999999888888766 35799999999999999999875421 123689999997541 1112578
Q ss_pred ccEEEEccchhhccCCHHHH--HHHHHHHHhcccCCcEEEEEeCC
Q 018352 106 ADLVCCFQHLQMCFETEERA--RRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 106 FDlV~~~~~lh~~fes~~~~--~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
||+|++....+.. ..... ..+++++.++|+|||++++...+
T Consensus 152 fD~Ii~d~~~~~~--~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 194 (283)
T 2i7c_A 152 YDVIIVDSSDPIG--PAETLFNQNFYEKIYNALKPNGYCVAQCES 194 (283)
T ss_dssp EEEEEEECCCTTT--GGGGGSSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred ceEEEEcCCCCCC--cchhhhHHHHHHHHHHhcCCCcEEEEECCC
Confidence 9999986543331 11122 68999999999999999988654
No 237
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.12 E-value=6.9e-11 Score=118.58 Aligned_cols=112 Identities=19% Similarity=0.113 Sum_probs=83.1
Q ss_pred CCCCEEEEECCCCChhHHHHHHh--cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCccc
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~--~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FD 107 (357)
.++.+|||+|||+|+.+..++.. +.++|+|+|+|+.+++.++++.+..+.. +.++++|+..... . ..++||
T Consensus 100 ~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~--v~~~~~Da~~l~~--~---~~~~FD 172 (464)
T 3m6w_A 100 KPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP--LAVTQAPPRALAE--A---FGTYFH 172 (464)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC--CEEECSCHHHHHH--H---HCSCEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe--EEEEECCHHHhhh--h---ccccCC
Confidence 47889999999999998888765 3469999999999999999999877553 8888888754221 0 257899
Q ss_pred EEEEccc------hhh------ccCC------HHHHHHHHHHHHhcccCCcEEEEEeCC
Q 018352 108 LVCCFQH------LQM------CFET------EERARRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 108 lV~~~~~------lh~------~fes------~~~~~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
+|++... ++. .... ....+++|+++.++|||||+++.+|+.
T Consensus 173 ~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs 231 (464)
T 3m6w_A 173 RVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCT 231 (464)
T ss_dssp EEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred EEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEecc
Confidence 9996211 111 0000 122378999999999999999987654
No 238
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.12 E-value=2.5e-10 Score=113.40 Aligned_cols=113 Identities=14% Similarity=0.112 Sum_probs=84.2
Q ss_pred CCCCEEEEECCCCChhHHHHHHhc-CCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~-~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
.++.+|||+|||+|+.+..++... ..+|+|+|+|+.+++.++++.+..+. ++.++++|+....- .+ ..++||+
T Consensus 245 ~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~--~~~~~~~D~~~~~~--~~--~~~~fD~ 318 (429)
T 1sqg_A 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM--KATVKQGDGRYPSQ--WC--GEQQFDR 318 (429)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC--CCEEEECCTTCTHH--HH--TTCCEEE
T ss_pred CCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC--CeEEEeCchhhchh--hc--ccCCCCE
Confidence 467899999999999988887763 36999999999999999999876644 57899999877541 11 3478999
Q ss_pred EEEcc------chhhc-----cCCH-------HHHHHHHHHHHhcccCCcEEEEEeCC
Q 018352 109 VCCFQ------HLQMC-----FETE-------ERARRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 109 V~~~~------~lh~~-----fes~-------~~~~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
|++.. .++.. ..+. .....+++++.++|||||+++.++++
T Consensus 319 Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs 376 (429)
T 1sqg_A 319 ILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCS 376 (429)
T ss_dssp EEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESC
T ss_pred EEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 98632 12210 0011 11258899999999999999988644
No 239
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.11 E-value=3.4e-10 Score=103.82 Aligned_cols=102 Identities=18% Similarity=0.087 Sum_probs=82.1
Q ss_pred CCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEE
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
.+..+|||||||.|-++..|. +..+|+|+|||+.|++.++++....+ .+..|.++|....+. .++||+|
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g--~~~~~~v~D~~~~~~-------~~~~Dvv 172 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKD--WDFTFALQDVLCAPP-------AEAGDLA 172 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTT--CEEEEEECCTTTSCC-------CCBCSEE
T ss_pred CCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcC--CCceEEEeecccCCC-------CCCcchH
Confidence 457799999999997777776 67799999999999999999976654 377899999987665 4699999
Q ss_pred EEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 110 ~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
++.-++|+ +++.+ +....++...|+++|+++-.
T Consensus 173 Lllk~lh~-LE~q~--~~~~~~ll~aL~~~~vvVsf 205 (253)
T 3frh_A 173 LIFKLLPL-LEREQ--AGSAMALLQSLNTPRMAVSF 205 (253)
T ss_dssp EEESCHHH-HHHHS--TTHHHHHHHHCBCSEEEEEE
T ss_pred HHHHHHHH-hhhhc--hhhHHHHHHHhcCCCEEEEc
Confidence 99999998 53333 33444888899999877644
No 240
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.11 E-value=2e-10 Score=110.61 Aligned_cols=111 Identities=12% Similarity=0.077 Sum_probs=85.8
Q ss_pred HcCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcc
Q 018352 27 IYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (357)
Q Consensus 27 ~~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~F 106 (357)
..+.++.+|||+|||+|..+.. +. +..+|+|+|+|+.+++.|+++.+.++...++.|+++|+.... ++|
T Consensus 191 ~~~~~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---------~~f 259 (336)
T 2yx1_A 191 KKVSLNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---------VKG 259 (336)
T ss_dssp HHCCTTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---------CCE
T ss_pred HhcCCCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---------CCC
Confidence 4456789999999999988877 65 677999999999999999999987765447999999986521 679
Q ss_pred cEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc--hHHHHHH
Q 018352 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS--STIWAKY 156 (357)
Q Consensus 107 DlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~--~~i~~~~ 156 (357)
|+|++... ++ ...++..+.++|+|||++++...+. ..+.+.+
T Consensus 260 D~Vi~dpP-~~-------~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~l 303 (336)
T 2yx1_A 260 NRVIMNLP-KF-------AHKFIDKALDIVEEGGVIHYYTIGKDFDKAIKLF 303 (336)
T ss_dssp EEEEECCT-TT-------GGGGHHHHHHHEEEEEEEEEEEEESSSHHHHHHH
T ss_pred cEEEECCc-Hh-------HHHHHHHHHHHcCCCCEEEEEEeecCchHHHHHH
Confidence 99998642 12 2267899999999999988764333 3444433
No 241
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.08 E-value=3.5e-10 Score=114.06 Aligned_cols=112 Identities=12% Similarity=0.034 Sum_probs=83.9
Q ss_pred CCCEEEEECCCCChhHHHHHHh--cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 31 PYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~--~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
++.+|||+|||+|+.+..++.. +.+.|+|+|+|+.+++.++++.+..+.. ++.++++|+...... ..++||+
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~-nv~~~~~D~~~~~~~-----~~~~fD~ 190 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGIS-NVALTHFDGRVFGAA-----VPEMFDA 190 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCCSTTHHHH-----STTCEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEeCCHHHhhhh-----ccccCCE
Confidence 7889999999999988888775 3469999999999999999998766543 688999998763221 2468999
Q ss_pred EEEcc------chhhcc-----CCH-------HHHHHHHHHHHhcccCCcEEEEEeCC
Q 018352 109 VCCFQ------HLQMCF-----ETE-------ERARRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 109 V~~~~------~lh~~f-----es~-------~~~~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
|+|.- .++..- -+. ...+++|+++.++|||||+++.+|+.
T Consensus 191 Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs 248 (479)
T 2frx_A 191 ILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCT 248 (479)
T ss_dssp EEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred EEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEeccc
Confidence 99731 121100 011 22457899999999999999988654
No 242
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.08 E-value=7.3e-10 Score=104.96 Aligned_cols=79 Identities=19% Similarity=0.187 Sum_probs=60.5
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
..++.+|||+|||+|..+..++.. ..+|+|+|+|+.+++.|+++....+. .+++++++|+...++ .+||+
T Consensus 40 ~~~~~~VLDiG~G~G~lt~~La~~-~~~v~~vDi~~~~~~~a~~~~~~~~~-~~v~~~~~D~~~~~~--------~~~D~ 109 (299)
T 2h1r_A 40 IKSSDIVLEIGCGTGNLTVKLLPL-AKKVITIDIDSRMISEVKKRCLYEGY-NNLEVYEGDAIKTVF--------PKFDV 109 (299)
T ss_dssp CCTTCEEEEECCTTSTTHHHHTTT-SSEEEEECSCHHHHHHHHHHHHHTTC-CCEEC----CCSSCC--------CCCSE
T ss_pred CCCcCEEEEEcCcCcHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEECchhhCCc--------ccCCE
Confidence 346789999999999888887665 45999999999999999998865432 368999999977543 47999
Q ss_pred EEEccchhh
Q 018352 109 VCCFQHLQM 117 (357)
Q Consensus 109 V~~~~~lh~ 117 (357)
|+++...+.
T Consensus 110 Vv~n~py~~ 118 (299)
T 2h1r_A 110 CTANIPYKI 118 (299)
T ss_dssp EEEECCGGG
T ss_pred EEEcCCccc
Confidence 999877665
No 243
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.07 E-value=2.7e-10 Score=114.04 Aligned_cols=113 Identities=14% Similarity=0.050 Sum_probs=83.6
Q ss_pred CCCCEEEEECCCCChhHHHHHHh--cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCccc
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~--~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FD 107 (357)
.++.+|||+|||+|+.+..++.. +.++|+++|+|+.+++.++++.+..+.. ++.++++|+..... . ..++||
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~-nv~v~~~Da~~l~~--~---~~~~FD 177 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVS-NAIVTNHAPAELVP--H---FSGFFD 177 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCS-SEEEECCCHHHHHH--H---HTTCEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEeCCHHHhhh--h---ccccCC
Confidence 47889999999999988888765 4469999999999999999998876543 68888888754221 1 247899
Q ss_pred EEEEccc---hhhccCCH---------------HHHHHHHHHHHhcccCCcEEEEEeCC
Q 018352 108 LVCCFQH---LQMCFETE---------------ERARRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 108 lV~~~~~---lh~~fes~---------------~~~~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
+|++... ....-.+. ...+++|.++.++|||||+++.+|+.
T Consensus 178 ~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs 236 (456)
T 3m4x_A 178 RIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCT 236 (456)
T ss_dssp EEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESC
T ss_pred EEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEee
Confidence 9997431 11100011 22347899999999999999987664
No 244
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.07 E-value=1.4e-10 Score=107.36 Aligned_cols=104 Identities=17% Similarity=0.193 Sum_probs=84.2
Q ss_pred CCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
++..+|||||||.|-++..|... +..+|+|+||++.|++.++++...++. +..+.+.|...... .++||+
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~--~~~~~v~D~~~~~p-------~~~~Dv 201 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNV--PHRTNVADLLEDRL-------DEPADV 201 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTC--CEEEEECCTTTSCC-------CSCCSE
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCC--CceEEEeeecccCC-------CCCcch
Confidence 45679999999999888777766 677999999999999999999887654 57889999876554 588999
Q ss_pred EEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
|++.-++|+ ++.+. ....+ ++.+.|+++|.|+--
T Consensus 202 aL~lkti~~-Le~q~-kg~g~-~ll~aL~~~~vvVSf 235 (281)
T 3lcv_B 202 TLLLKTLPC-LETQQ-RGSGW-EVIDIVNSPNIVVTF 235 (281)
T ss_dssp EEETTCHHH-HHHHS-TTHHH-HHHHHSSCSEEEEEE
T ss_pred HHHHHHHHH-hhhhh-hHHHH-HHHHHhCCCCEEEec
Confidence 999999999 42222 22444 899999999988754
No 245
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.02 E-value=1.2e-09 Score=107.09 Aligned_cols=114 Identities=16% Similarity=0.153 Sum_probs=88.2
Q ss_pred CCCCEEEEECCCCChhHHHHHHhcC---------------------------------------CeEEEEeCChHHHHHH
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETALI---------------------------------------ANYIGIDVATSGIGEA 70 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~~---------------------------------------~~v~GiDiS~~~l~~A 70 (357)
.++.+|||++||+|..+...+.... .+|+|+|+++.|++.|
T Consensus 194 ~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~A 273 (385)
T 3ldu_A 194 KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIA 273 (385)
T ss_dssp CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHH
Confidence 4678999999999988877655421 4799999999999999
Q ss_pred HHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccC--CcEEEEEeCC
Q 018352 71 RDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKP--GGYFLGITPD 148 (357)
Q Consensus 71 ~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~Lkp--GG~fi~t~pd 148 (357)
+++....+....++|.++|+..... ..+||+|+|+-.+..-..+.+....+.+.+.+.||+ ||.+++.+++
T Consensus 274 r~Na~~~gl~~~i~~~~~D~~~l~~-------~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~ 346 (385)
T 3ldu_A 274 RENAEIAGVDEYIEFNVGDATQFKS-------EDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLITSY 346 (385)
T ss_dssp HHHHHHHTCGGGEEEEECCGGGCCC-------SCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEESC
T ss_pred HHHHHHcCCCCceEEEECChhhcCc-------CCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEECC
Confidence 9998877655579999999876443 368999999775432222345667778888888876 9999988888
Q ss_pred ch
Q 018352 149 SS 150 (357)
Q Consensus 149 ~~ 150 (357)
..
T Consensus 347 ~~ 348 (385)
T 3ldu_A 347 ED 348 (385)
T ss_dssp TT
T ss_pred HH
Confidence 65
No 246
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.02 E-value=3.3e-09 Score=104.01 Aligned_cols=115 Identities=11% Similarity=0.045 Sum_probs=91.3
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhcC---------------------------------------CeEEEEeCChHHHHH
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETALI---------------------------------------ANYIGIDVATSGIGE 69 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~~---------------------------------------~~v~GiDiS~~~l~~ 69 (357)
..++..|||.+||+|..+...+.... .+++|+|+|+.|++.
T Consensus 192 ~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~ 271 (384)
T 3ldg_A 192 WFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEI 271 (384)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHH
Confidence 35678999999999988876654321 359999999999999
Q ss_pred HHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccC--CcEEEEEeC
Q 018352 70 ARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKP--GGYFLGITP 147 (357)
Q Consensus 70 A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~Lkp--GG~fi~t~p 147 (357)
|+++.+..+....++|.++|+..... ..+||+|+|+--++.-+.+.+....+.+.+.+.||+ ||.+.+.++
T Consensus 272 Ar~Na~~~gl~~~I~~~~~D~~~l~~-------~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 344 (384)
T 3ldg_A 272 ARKNAREVGLEDVVKLKQMRLQDFKT-------NKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTN 344 (384)
T ss_dssp HHHHHHHTTCTTTEEEEECCGGGCCC-------CCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEES
T ss_pred HHHHHHHcCCCCceEEEECChHHCCc-------cCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEEC
Confidence 99999877665579999999877543 358999999865444345667778888888888876 999999999
Q ss_pred Cch
Q 018352 148 DSS 150 (357)
Q Consensus 148 d~~ 150 (357)
+.+
T Consensus 345 ~~~ 347 (384)
T 3ldg_A 345 DTD 347 (384)
T ss_dssp CTT
T ss_pred CHH
Confidence 865
No 247
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.00 E-value=1.9e-09 Score=106.03 Aligned_cols=115 Identities=18% Similarity=0.108 Sum_probs=86.5
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhcC---------------------------------------CeEEEEeCChHHHHH
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETALI---------------------------------------ANYIGIDVATSGIGE 69 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~~---------------------------------------~~v~GiDiS~~~l~~ 69 (357)
..++..|||.+||+|..+...+.... .+++|+|+|+.|++.
T Consensus 199 ~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~ 278 (393)
T 3k0b_A 199 WHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEI 278 (393)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHH
Confidence 34678999999999988876655321 369999999999999
Q ss_pred HHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccC--CcEEEEEeC
Q 018352 70 ARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKP--GGYFLGITP 147 (357)
Q Consensus 70 A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~Lkp--GG~fi~t~p 147 (357)
|+++.+..+....++|.++|+..... ..+||+|+|+-.++.-....+....+.+.+.+.||+ ||.+++.++
T Consensus 279 Ar~Na~~~gl~~~I~~~~~D~~~~~~-------~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 351 (393)
T 3k0b_A 279 AKQNAVEAGLGDLITFRQLQVADFQT-------EDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLTS 351 (393)
T ss_dssp HHHHHHHTTCTTCSEEEECCGGGCCC-------CCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEEC
T ss_pred HHHHHHHcCCCCceEEEECChHhCCC-------CCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 99998877655568999999877543 358999999854322122334566677777777766 999999988
Q ss_pred Cch
Q 018352 148 DSS 150 (357)
Q Consensus 148 d~~ 150 (357)
+..
T Consensus 352 ~~~ 354 (393)
T 3k0b_A 352 YEL 354 (393)
T ss_dssp CTT
T ss_pred CHH
Confidence 865
No 248
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.98 E-value=1e-09 Score=107.75 Aligned_cols=102 Identities=20% Similarity=0.217 Sum_probs=76.8
Q ss_pred CCCEEEEECCCCChhHHHHHHh--cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 31 PYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~--~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
++.+|||+|||+|..+..+++. ...+++|+|+++.+++.| .++.++++|+.... ..++||+
T Consensus 39 ~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----------~~~~~~~~D~~~~~-------~~~~fD~ 101 (421)
T 2ih2_A 39 RGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----------PWAEGILADFLLWE-------PGEAFDL 101 (421)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----------TTEEEEESCGGGCC-------CSSCEEE
T ss_pred CCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----------CCCcEEeCChhhcC-------ccCCCCE
Confidence 5679999999999988888765 457999999999999877 15789999986532 2468999
Q ss_pred EEEccchhhccC--------CHHH-----------------HHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 109 VCCFQHLQMCFE--------TEER-----------------ARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 109 V~~~~~lh~~fe--------s~~~-----------------~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
|+++-.+...-. ..+. ...+++.+.++|+|||++++.+|+.
T Consensus 102 Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~ 167 (421)
T 2ih2_A 102 ILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPAT 167 (421)
T ss_dssp EEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGG
T ss_pred EEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChH
Confidence 999633221000 1111 1267999999999999999998874
No 249
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.96 E-value=9.7e-10 Score=102.32 Aligned_cols=100 Identities=10% Similarity=-0.015 Sum_probs=76.9
Q ss_pred CCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhc--C-CCceeEEEEcCCCCCchhhhhhhcCCcc
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQ--R-KNFIAEFFEADPCAENFETQMQEKANQA 106 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~--~-~~~~v~f~~~D~~~~~~~~~l~~~~~~F 106 (357)
+...+|||||||+|..+..+++.+ .+++++|+++.+++.|++++... . ...+++++.+|+... . ++|
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~--------~-~~f 140 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLD--------I-KKY 140 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSC--------C-CCE
T ss_pred CCCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHH--------H-hhC
Confidence 355799999999998888877775 89999999999999998865421 0 123688899987542 1 679
Q ss_pred cEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCC
Q 018352 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 107 DlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
|+|++.. ... ..+++++.++|+|||++++...+
T Consensus 141 D~Ii~d~-----~dp----~~~~~~~~~~L~pgG~lv~~~~~ 173 (262)
T 2cmg_A 141 DLIFCLQ-----EPD----IHRIDGLKRMLKEDGVFISVAKH 173 (262)
T ss_dssp EEEEESS-----CCC----HHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CEEEECC-----CCh----HHHHHHHHHhcCCCcEEEEEcCC
Confidence 9999863 111 23899999999999999987433
No 250
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.96 E-value=5.2e-09 Score=103.92 Aligned_cols=109 Identities=21% Similarity=0.095 Sum_probs=80.0
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
..++.+|||+|||+|..+..++.. ..+|+|+|+|+.|++.|+++.+.++.. ++|+++|+..... .+||+
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~-~~~V~gvD~s~~ai~~A~~n~~~ngl~--v~~~~~d~~~~~~--------~~fD~ 356 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKR-GFNVKGFDSNEFAIEMARRNVEINNVD--AEFEVASDREVSV--------KGFDT 356 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCC--EEEEECCTTTCCC--------TTCSE
T ss_pred cCCCCEEEEeeccchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChHHcCc--------cCCCE
Confidence 356789999999999888877665 559999999999999999998876543 8999999876421 27999
Q ss_pred EEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCchHHHHHH
Q 018352 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKY 156 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~i~~~~ 156 (357)
|++.....- . ...+++.+. .|+|||+++++ .|...+.+.+
T Consensus 357 Vv~dPPr~g-~-----~~~~~~~l~-~l~p~givyvs-c~p~tlarDl 396 (425)
T 2jjq_A 357 VIVDPPRAG-L-----HPRLVKRLN-REKPGVIVYVS-CNPETFARDV 396 (425)
T ss_dssp EEECCCTTC-S-----CHHHHHHHH-HHCCSEEEEEE-SCHHHHHHHH
T ss_pred EEEcCCccc-h-----HHHHHHHHH-hcCCCcEEEEE-CChHHHHhHH
Confidence 998654221 1 123444444 48999988776 4555554433
No 251
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.95 E-value=1.2e-09 Score=108.98 Aligned_cols=112 Identities=18% Similarity=0.113 Sum_probs=83.5
Q ss_pred CCCEEEEECCCCChhHHHHHHh--------------cCCeEEEEeCChHHHHHHHHHhHhcCCCc-eeEEEEcCCCCCch
Q 018352 31 PYVTVCDLYCGAGVDVDKWETA--------------LIANYIGIDVATSGIGEARDTWENQRKNF-IAEFFEADPCAENF 95 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~--------------~~~~v~GiDiS~~~l~~A~~r~~~~~~~~-~v~f~~~D~~~~~~ 95 (357)
++.+|||.|||+|+.+..+... ...+++|+|+++.+++.|+.+....+... ++.+.++|....+.
T Consensus 171 ~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~~ 250 (445)
T 2okc_A 171 MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKEP 250 (445)
T ss_dssp TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSCC
T ss_pred CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCcc
Confidence 4679999999999988776653 23579999999999999998876554321 56789999876543
Q ss_pred hhhhhhcCCcccEEEEccchhhccCC-------------HHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 96 ETQMQEKANQADLVCCFQHLQMCFET-------------EERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 96 ~~~l~~~~~~FDlV~~~~~lh~~fes-------------~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
..+||+|+++..++..... ......+++.+.+.|||||++.+.+|++
T Consensus 251 -------~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~~ 310 (445)
T 2okc_A 251 -------STLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPDN 310 (445)
T ss_dssp -------SSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHH
T ss_pred -------cCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECCc
Confidence 2489999998655431110 0112478999999999999999998764
No 252
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.93 E-value=1.9e-08 Score=99.98 Aligned_cols=114 Identities=16% Similarity=0.145 Sum_probs=80.1
Q ss_pred CCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEE
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
.++.+|||+|||+|..+..++.. ..+|+|+|+|+.+++.|+++.+.++.. +++|+++|+..... .+....++||+|
T Consensus 285 ~~~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~~~~~~~-~v~f~~~d~~~~l~--~~~~~~~~fD~V 360 (433)
T 1uwv_A 285 QPEDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNARLNGLQ-NVTFYHENLEEDVT--KQPWAKNGFDKV 360 (433)
T ss_dssp CTTCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCTTSCCS--SSGGGTTCCSEE
T ss_pred CCCCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEECCHHHHhh--hhhhhcCCCCEE
Confidence 46789999999999888887666 569999999999999999998776544 79999999976211 001134689999
Q ss_pred EEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCchHHHHHH
Q 018352 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKY 156 (357)
Q Consensus 110 ~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~i~~~~ 156 (357)
++.-...- .. .+++.+.+ ++|++++++ .+|...+.+-+
T Consensus 361 v~dPPr~g---~~----~~~~~l~~-~~p~~ivyv-sc~p~tlard~ 398 (433)
T 1uwv_A 361 LLDPARAG---AA----GVMQQIIK-LEPIRIVYV-SCNPATLARDS 398 (433)
T ss_dssp EECCCTTC---CH----HHHHHHHH-HCCSEEEEE-ESCHHHHHHHH
T ss_pred EECCCCcc---HH----HHHHHHHh-cCCCeEEEE-ECChHHHHhhH
Confidence 98653322 11 24444443 788876665 45665555443
No 253
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.92 E-value=1e-08 Score=97.01 Aligned_cols=79 Identities=14% Similarity=0.003 Sum_probs=65.7
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
..++.+|||||||+|..+..++.. ..+|+|+|+++.+++.|++++... .+++++++|+...++ +..+||+
T Consensus 48 ~~~~~~VLEIG~G~G~lT~~La~~-~~~V~aVEid~~li~~a~~~~~~~---~~v~vi~gD~l~~~~------~~~~fD~ 117 (295)
T 3gru_A 48 LTKDDVVLEIGLGKGILTEELAKN-AKKVYVIEIDKSLEPYANKLKELY---NNIEIIWGDALKVDL------NKLDFNK 117 (295)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCGGGHHHHHHHHHHC---SSEEEEESCTTTSCG------GGSCCSE
T ss_pred CCCcCEEEEECCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHhccC---CCeEEEECchhhCCc------ccCCccE
Confidence 347789999999999888888776 469999999999999999998632 278999999988766 3457999
Q ss_pred EEEccchhh
Q 018352 109 VCCFQHLQM 117 (357)
Q Consensus 109 V~~~~~lh~ 117 (357)
|+++..++.
T Consensus 118 Iv~NlPy~i 126 (295)
T 3gru_A 118 VVANLPYQI 126 (295)
T ss_dssp EEEECCGGG
T ss_pred EEEeCcccc
Confidence 998876665
No 254
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.89 E-value=1.5e-08 Score=98.28 Aligned_cols=125 Identities=13% Similarity=0.015 Sum_probs=83.7
Q ss_pred CCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcC---CC----ceeEEEEcCCCCCchhhhhhhcC
Q 018352 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQR---KN----FIAEFFEADPCAENFETQMQEKA 103 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~---~~----~~v~f~~~D~~~~~~~~~l~~~~ 103 (357)
.+.+|||||||.|+.+..+++.+..+++++|+++.+++.|++.+.... .. .+++++.+|+.. +........
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~--~L~~~~~~~ 265 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIP--VLKRYAKEG 265 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHH--HHHHHHHHT
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHH--HHHhhhccC
Confidence 467999999999999888887777899999999999999999875321 11 158999999855 211111125
Q ss_pred CcccEEEEccch-hhcc-----CCHHHHHHHHHHHHhcccCCcEEEEEe--CCchHHHHHHH
Q 018352 104 NQADLVCCFQHL-QMCF-----ETEERARRLLQNVSSLLKPGGYFLGIT--PDSSTIWAKYQ 157 (357)
Q Consensus 104 ~~FDlV~~~~~l-h~~f-----es~~~~~~~L~~i~~~LkpGG~fi~t~--pd~~~i~~~~~ 157 (357)
++||+|++...- .... -+.+-.+.+++.+.++|+|||+++... +....+...++
T Consensus 266 ~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~~e~~~~~~ 327 (364)
T 2qfm_A 266 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYE 327 (364)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHH
T ss_pred CCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHHH
Confidence 789999986432 1111 122333334444499999999998774 44344444443
No 255
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.89 E-value=5.8e-09 Score=95.80 Aligned_cols=77 Identities=8% Similarity=-0.013 Sum_probs=59.0
Q ss_pred CCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEE
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
.++.+|||+|||+|..+..++... .+|+|+|+|+.|++.|+++.... .+++++++|+...++. ....|+ |
T Consensus 29 ~~~~~VLDiG~G~G~lt~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~---~~v~~~~~D~~~~~~~-----~~~~~~-v 98 (244)
T 1qam_A 29 NEHDNIFEIGSGKGHFTLELVQRC-NFVTAIEIDHKLCKTTENKLVDH---DNFQVLNKDILQFKFP-----KNQSYK-I 98 (244)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHHHHHHHHTTTC---CSEEEECCCGGGCCCC-----SSCCCE-E
T ss_pred CCCCEEEEEeCCchHHHHHHHHcC-CeEEEEECCHHHHHHHHHhhccC---CCeEEEEChHHhCCcc-----cCCCeE-E
Confidence 467899999999998888887766 69999999999999999987642 2789999999776551 124564 4
Q ss_pred EEccchh
Q 018352 110 CCFQHLQ 116 (357)
Q Consensus 110 ~~~~~lh 116 (357)
+++...+
T Consensus 99 v~nlPy~ 105 (244)
T 1qam_A 99 FGNIPYN 105 (244)
T ss_dssp EEECCGG
T ss_pred EEeCCcc
Confidence 4554443
No 256
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.87 E-value=1.5e-08 Score=98.65 Aligned_cols=113 Identities=12% Similarity=0.097 Sum_probs=81.0
Q ss_pred CCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhc--------
Q 018352 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEK-------- 102 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~-------- 102 (357)
.+.+|||+|||+|..+..++. ...+|+|+|+|+.+++.|+++.+.++. .+++|+++|+... ...+...
T Consensus 213 ~~~~vLDl~cG~G~~~l~la~-~~~~V~gvd~~~~ai~~a~~n~~~ng~-~~v~~~~~d~~~~--~~~~~~~~~~~~l~~ 288 (369)
T 3bt7_A 213 SKGDLLELYCGNGNFSLALAR-NFDRVLATEIAKPSVAAAQYNIAANHI-DNVQIIRMAAEEF--TQAMNGVREFNRLQG 288 (369)
T ss_dssp CCSEEEEESCTTSHHHHHHGG-GSSEEEEECCCHHHHHHHHHHHHHTTC-CSEEEECCCSHHH--HHHHSSCCCCTTGGG
T ss_pred CCCEEEEccCCCCHHHHHHHh-cCCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEECCHHHH--HHHHhhccccccccc
Confidence 357899999999988876654 567999999999999999999887654 3789999998542 1111100
Q ss_pred ----CCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCchHHHHHHH
Q 018352 103 ----ANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKYQ 157 (357)
Q Consensus 103 ----~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~i~~~~~ 157 (357)
..+||+|++.-.-.- +...+.+.|+++|.++...+|...+.+-+.
T Consensus 289 ~~~~~~~fD~Vv~dPPr~g----------~~~~~~~~l~~~g~ivyvsc~p~t~ard~~ 337 (369)
T 3bt7_A 289 IDLKSYQCETIFVDPPRSG----------LDSETEKMVQAYPRILYISCNPETLCKNLE 337 (369)
T ss_dssp SCGGGCCEEEEEECCCTTC----------CCHHHHHHHTTSSEEEEEESCHHHHHHHHH
T ss_pred cccccCCCCEEEECcCccc----------cHHHHHHHHhCCCEEEEEECCHHHHHHHHH
Confidence 137999987643211 233455667799999999999877655443
No 257
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.86 E-value=1.1e-08 Score=100.03 Aligned_cols=105 Identities=10% Similarity=-0.014 Sum_probs=80.9
Q ss_pred CCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhc---------------CCCceeEEEEcCCCCCc
Q 018352 31 PYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQ---------------RKNFIAEFFEADPCAEN 94 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~---------------~~~~~v~f~~~D~~~~~ 94 (357)
++.+|||+|||+|.....++.. +..+|+++|+++.+++.|++..+.+ +.. +++++++|+....
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~-~i~v~~~Da~~~~ 125 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEK-TIVINHDDANRLM 125 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSS-EEEEEESCHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCC-ceEEEcCcHHHHH
Confidence 6789999999999988888776 5568999999999999999998776 433 4899999975421
Q ss_pred hhhhhhhcCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 95 FETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 95 ~~~~l~~~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
. ...++||+|++.- + .+ ...++..+.+.|++||+++++..+.
T Consensus 126 ~-----~~~~~fD~I~lDP---~--~~---~~~~l~~a~~~lk~gG~l~vt~td~ 167 (378)
T 2dul_A 126 A-----ERHRYFHFIDLDP---F--GS---PMEFLDTALRSAKRRGILGVTATDG 167 (378)
T ss_dssp H-----HSTTCEEEEEECC---S--SC---CHHHHHHHHHHEEEEEEEEEEECCH
T ss_pred H-----hccCCCCEEEeCC---C--CC---HHHHHHHHHHhcCCCCEEEEEeecc
Confidence 1 1135799998653 1 11 2467888899999999998886544
No 258
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.86 E-value=3.1e-10 Score=104.10 Aligned_cols=104 Identities=10% Similarity=0.035 Sum_probs=73.6
Q ss_pred CCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEE
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
.++.+|||+|||+|..+..++..+ .+++|+|+|+.+++.|+++... ..+++++++|+...++. ..++| .|
T Consensus 28 ~~~~~VLDiG~G~G~~~~~l~~~~-~~v~~id~~~~~~~~a~~~~~~---~~~v~~~~~D~~~~~~~-----~~~~f-~v 97 (245)
T 1yub_A 28 KETDTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLFNLSSEKLKL---NTRVTLIHQDILQFQFP-----NKQRY-KI 97 (245)
T ss_dssp CSSEEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSSSSSSCTTTT---CSEEEECCSCCTTTTCC-----CSSEE-EE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhC-CeEEEEECCHHHHHHHHHHhcc---CCceEEEECChhhcCcc-----cCCCc-EE
Confidence 467899999999999888887776 6999999999999998877652 23789999999876541 13578 55
Q ss_pred EEccchhhccCCHHHHHHHH--------------HHHHhcccCCcEEEEEe
Q 018352 110 CCFQHLQMCFETEERARRLL--------------QNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 110 ~~~~~lh~~fes~~~~~~~L--------------~~i~~~LkpGG~fi~t~ 146 (357)
+++...+. +......++ +.+.++|+|||.+.+.+
T Consensus 98 v~n~Py~~---~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 98 VGNIPYHL---STQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp EEECCSSS---CHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred EEeCCccc---cHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 56543322 222222222 55778888888765543
No 259
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.85 E-value=3.9e-09 Score=99.73 Aligned_cols=97 Identities=15% Similarity=0.018 Sum_probs=68.3
Q ss_pred CCCCCEEEEECCCC------ChhHHHHHH-hc-CCeEEEEeCChHHHHHHHHHhHhcCCCceeEE-EEcCCCCCchhhhh
Q 018352 29 SHPYVTVCDLYCGA------GVDVDKWET-AL-IANYIGIDVATSGIGEARDTWENQRKNFIAEF-FEADPCAENFETQM 99 (357)
Q Consensus 29 ~~~~~~VLDlGCG~------G~~l~k~~~-~~-~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f-~~~D~~~~~~~~~l 99 (357)
++++.+|||||||+ |. ..++. .+ ..+|+|+|+|+. + . +++| +++|+....+
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v---------~----~v~~~i~gD~~~~~~---- 120 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-V---------S----DADSTLIGDCATVHT---- 120 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-B---------C----SSSEEEESCGGGCCC----
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-C---------C----CCEEEEECccccCCc----
Confidence 45788999999954 65 22222 23 469999999997 1 1 5778 9999876544
Q ss_pred hhcCCcccEEEEccchhhc-------cCCHHHHHHHHHHHHhcccCCcEEEEEeCC
Q 018352 100 QEKANQADLVCCFQHLQMC-------FETEERARRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 100 ~~~~~~FDlV~~~~~lh~~-------fes~~~~~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
.++||+|+|....+.. ....+..+.+++++.++|||||.|++.+..
T Consensus 121 ---~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~ 173 (290)
T 2xyq_A 121 ---ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITE 173 (290)
T ss_dssp ---SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred ---cCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 3689999997542210 111234568999999999999999997543
No 260
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.81 E-value=2.5e-08 Score=93.24 Aligned_cols=89 Identities=16% Similarity=0.067 Sum_probs=68.7
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
..++ +|||||||+|..+..++..+ .+|+|+|+++.|++.+++++... +++++++|+...++.. ...+|.
T Consensus 45 ~~~~-~VLEIG~G~G~lt~~L~~~~-~~V~avEid~~~~~~l~~~~~~~----~v~vi~~D~l~~~~~~-----~~~~~~ 113 (271)
T 3fut_A 45 PFTG-PVFEVGPGLGALTRALLEAG-AEVTAIEKDLRLRPVLEETLSGL----PVRLVFQDALLYPWEE-----VPQGSL 113 (271)
T ss_dssp CCCS-CEEEECCTTSHHHHHHHHTT-CCEEEEESCGGGHHHHHHHTTTS----SEEEEESCGGGSCGGG-----SCTTEE
T ss_pred CCCC-eEEEEeCchHHHHHHHHHcC-CEEEEEECCHHHHHHHHHhcCCC----CEEEEECChhhCChhh-----ccCccE
Confidence 4567 99999999998888887765 69999999999999999988642 7899999998776621 136899
Q ss_pred EEEccchhhccCCHHHHHHHHHH
Q 018352 109 VCCFQHLQMCFETEERARRLLQN 131 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~ 131 (357)
|+++...+- +.+-..+++..
T Consensus 114 iv~NlPy~i---ss~il~~ll~~ 133 (271)
T 3fut_A 114 LVANLPYHI---ATPLVTRLLKT 133 (271)
T ss_dssp EEEEECSSC---CHHHHHHHHHH
T ss_pred EEecCcccc---cHHHHHHHhcC
Confidence 888765554 44545555554
No 261
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.81 E-value=2.3e-08 Score=95.20 Aligned_cols=114 Identities=11% Similarity=-0.004 Sum_probs=80.1
Q ss_pred CCCCEEEEECCCCChhHHHHHHh--cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCccc
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~--~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FD 107 (357)
.++.+|||+|||+|+.+..++.. +.++|+++|+++.+++.++++.+..+.. +++++++|+....... . ...+||
T Consensus 101 ~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~-~v~~~~~D~~~~~~~~--~-~~~~fD 176 (309)
T 2b9e_A 101 PPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVS-CCELAEEDFLAVSPSD--P-RYHEVH 176 (309)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGGGSCTTC--G-GGTTEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEeCChHhcCccc--c-ccCCCC
Confidence 47889999999999988887764 4579999999999999999998876542 6899999986543210 0 115799
Q ss_pred EEEEcc-----c-hhh------c----cCCH----HHHHHHHHHHHhcccCCcEEEEEeCC
Q 018352 108 LVCCFQ-----H-LQM------C----FETE----ERARRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 108 lV~~~~-----~-lh~------~----fes~----~~~~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
.|++.- + +.. . -+.. ...+++|+++.++|+ ||+++..|+.
T Consensus 177 ~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs 236 (309)
T 2b9e_A 177 YILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCS 236 (309)
T ss_dssp EEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESC
T ss_pred EEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCC
Confidence 999731 1 110 0 0011 123467888988887 9999877655
No 262
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.77 E-value=1.3e-08 Score=99.88 Aligned_cols=107 Identities=16% Similarity=0.171 Sum_probs=82.7
Q ss_pred CCCEEEEECCCCChhHHHHHHh--cCCeEEEEeCChHHHHHHHHHhHhcCCCce-eEEEEcCCCCCchhhhhh-hcCCcc
Q 018352 31 PYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFI-AEFFEADPCAENFETQMQ-EKANQA 106 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~--~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~-v~f~~~D~~~~~~~~~l~-~~~~~F 106 (357)
++.+|||++||+|.....++.. +..+|+++|+++.+++.+++..+.++...+ ++++++|+.. + +. ...++|
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~--~---l~~~~~~~f 126 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANF--F---LRKEWGFGF 126 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHH--H---HHSCCSSCE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHH--H---HHHhhCCCC
Confidence 5789999999999988887774 346899999999999999999988766545 8999999744 1 11 123579
Q ss_pred cEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCch
Q 018352 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (357)
Q Consensus 107 DlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~ 150 (357)
|+|++.- | .. ...++..+.++|++||+++++.-+..
T Consensus 127 D~V~lDP---~--g~---~~~~l~~a~~~Lk~gGll~~t~t~~~ 162 (392)
T 3axs_A 127 DYVDLDP---F--GT---PVPFIESVALSMKRGGILSLTATDTA 162 (392)
T ss_dssp EEEEECC---S--SC---CHHHHHHHHHHEEEEEEEEEEECCHH
T ss_pred cEEEECC---C--cC---HHHHHHHHHHHhCCCCEEEEEecchh
Confidence 9999875 2 11 23578888999999999988865543
No 263
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.73 E-value=6.8e-08 Score=89.47 Aligned_cols=79 Identities=11% Similarity=0.088 Sum_probs=61.1
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
..++.+|||||||+|..+..++... .+|+|+|+++.|++.+++++... .+++++++|+...++.... ...+||+
T Consensus 27 ~~~~~~VLEIG~G~G~lt~~La~~~-~~V~avEid~~~~~~~~~~~~~~---~~v~~i~~D~~~~~~~~~~--~~~~~~v 100 (255)
T 3tqs_A 27 PQKTDTLVEIGPGRGALTDYLLTEC-DNLALVEIDRDLVAFLQKKYNQQ---KNITIYQNDALQFDFSSVK--TDKPLRV 100 (255)
T ss_dssp CCTTCEEEEECCTTTTTHHHHTTTS-SEEEEEECCHHHHHHHHHHHTTC---TTEEEEESCTTTCCGGGSC--CSSCEEE
T ss_pred CCCcCEEEEEcccccHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHhhC---CCcEEEEcchHhCCHHHhc--cCCCeEE
Confidence 4578899999999998888877665 69999999999999999998652 3789999999987763211 1357884
Q ss_pred EEEccc
Q 018352 109 VCCFQH 114 (357)
Q Consensus 109 V~~~~~ 114 (357)
+++..
T Consensus 101 -v~NlP 105 (255)
T 3tqs_A 101 -VGNLP 105 (255)
T ss_dssp -EEECC
T ss_pred -EecCC
Confidence 44443
No 264
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.69 E-value=3.9e-08 Score=100.53 Aligned_cols=114 Identities=16% Similarity=0.112 Sum_probs=82.4
Q ss_pred CCCEEEEECCCCChhHHHHHHh---c----------------CCeEEEEeCChHHHHHHHHHhHhcCCCc----eeEEEE
Q 018352 31 PYVTVCDLYCGAGVDVDKWETA---L----------------IANYIGIDVATSGIGEARDTWENQRKNF----IAEFFE 87 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~---~----------------~~~v~GiDiS~~~l~~A~~r~~~~~~~~----~v~f~~ 87 (357)
++.+|||.|||+|+++...... . ...++|+|+++.+++.|+.+..-.+... ++.+.+
T Consensus 169 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~ 248 (541)
T 2ar0_A 169 PREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRL 248 (541)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEE
T ss_pred CCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEe
Confidence 5679999999999988766543 1 2379999999999999998775443321 267889
Q ss_pred cCCCCCchhhhhhhcCCcccEEEEccchhhccC----------CHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 88 ADPCAENFETQMQEKANQADLVCCFQHLQMCFE----------TEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 88 ~D~~~~~~~~~l~~~~~~FDlV~~~~~lh~~fe----------s~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
+|....+.. ...+||+|+++-.+..... .......++..+.+.|+|||++.+.+|++
T Consensus 249 gDtL~~~~~-----~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~~ 315 (541)
T 2ar0_A 249 GNTLGSDGE-----NLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDN 315 (541)
T ss_dssp SCTTSHHHH-----TSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHH
T ss_pred CCCcccccc-----cccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecCc
Confidence 997653321 2468999999865443111 01122378999999999999999998875
No 265
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.65 E-value=1.5e-07 Score=99.10 Aligned_cols=118 Identities=14% Similarity=0.043 Sum_probs=83.0
Q ss_pred CCCCEEEEECCCCChhHHHHHHhc-------------------------------------------CCeEEEEeCChHH
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETAL-------------------------------------------IANYIGIDVATSG 66 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~-------------------------------------------~~~v~GiDiS~~~ 66 (357)
.++..|||.+||+|..+...+... ..+++|+|+++.|
T Consensus 189 ~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~a 268 (703)
T 3v97_A 189 QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARV 268 (703)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHH
T ss_pred CCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHH
Confidence 467899999999998877655421 1479999999999
Q ss_pred HHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEEEEccchhhccCCHHHHHHHHH---HHHhcccCCcEEE
Q 018352 67 IGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQ---NVSSLLKPGGYFL 143 (357)
Q Consensus 67 l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~~~~~lh~~fes~~~~~~~L~---~i~~~LkpGG~fi 143 (357)
++.|+.+....+....++|.++|+...... ...++||+|+|+--+..-+.+.+....+.+ ++.+.+.|||.++
T Consensus 269 v~~A~~N~~~agv~~~i~~~~~D~~~~~~~----~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~ 344 (703)
T 3v97_A 269 IQRARTNARLAGIGELITFEVKDVAQLTNP----LPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLS 344 (703)
T ss_dssp HHHHHHHHHHTTCGGGEEEEECCGGGCCCS----CTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred HHHHHHHHHHcCCCCceEEEECChhhCccc----cccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCeEE
Confidence 999999988776655689999998764220 012389999998433221223334444444 4445556899999
Q ss_pred EEeCCchH
Q 018352 144 GITPDSST 151 (357)
Q Consensus 144 ~t~pd~~~ 151 (357)
+.+++...
T Consensus 345 ilt~~~~l 352 (703)
T 3v97_A 345 LFSASPDL 352 (703)
T ss_dssp EEESCHHH
T ss_pred EEeCCHHH
Confidence 99998653
No 266
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.61 E-value=5.3e-07 Score=84.58 Aligned_cols=63 Identities=13% Similarity=0.151 Sum_probs=52.5
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhcC---CeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchh
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETALI---ANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFE 96 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~~---~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~ 96 (357)
..++.+|||||||+|..+..++.... .+|+|+|+|+.|++.|+++. . .+++++++|+...++.
T Consensus 40 ~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-~----~~v~~i~~D~~~~~~~ 105 (279)
T 3uzu_A 40 PERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-G----ELLELHAGDALTFDFG 105 (279)
T ss_dssp CCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-G----GGEEEEESCGGGCCGG
T ss_pred CCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-C----CCcEEEECChhcCChh
Confidence 45788999999999998888877644 23999999999999999884 2 2789999999887764
No 267
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.59 E-value=3.2e-08 Score=91.86 Aligned_cols=84 Identities=15% Similarity=0.065 Sum_probs=59.8
Q ss_pred CCCEEEEECCCCChhHHHHHHhcCCeEEEEeCCh-------HHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcC
Q 018352 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVAT-------SGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKA 103 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~-------~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~ 103 (357)
++.+|||+|||+|.++..++..+ .+|+|+|+|+ .+++.|+++.+.++...+++|+++|+... ...+....
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~g-~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~--l~~~~~~~ 159 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASLG-LTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQ--MPALVKTQ 159 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHTT-CCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHH--HHHHHHHH
T ss_pred CcCeEEEeeCccCHHHHHHHHhC-CEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHH--HHhhhccC
Confidence 46899999999999988887764 5899999999 99999987665432222589999997541 11111011
Q ss_pred CcccEEEEccchhh
Q 018352 104 NQADLVCCFQHLQM 117 (357)
Q Consensus 104 ~~FDlV~~~~~lh~ 117 (357)
++||+|++...+++
T Consensus 160 ~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 160 GKPDIVYLDPMYPE 173 (258)
T ss_dssp CCCSEEEECCCC--
T ss_pred CCccEEEECCCCCC
Confidence 68999999765444
No 268
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.58 E-value=2.2e-07 Score=85.70 Aligned_cols=63 Identities=13% Similarity=0.045 Sum_probs=52.6
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchh
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFE 96 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~ 96 (357)
..++.+|||+|||+|..+..++..+..+|+|+|+|+.|++.++++ . ..+++++++|+...++.
T Consensus 29 ~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~-~----~~~v~~i~~D~~~~~~~ 91 (249)
T 3ftd_A 29 IEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI-G----DERLEVINEDASKFPFC 91 (249)
T ss_dssp CCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS-C----CTTEEEECSCTTTCCGG
T ss_pred CCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc-c----CCCeEEEEcchhhCChh
Confidence 346789999999999888887776557999999999999999877 2 23789999999887763
No 269
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.58 E-value=2.1e-07 Score=86.02 Aligned_cols=80 Identities=9% Similarity=-0.087 Sum_probs=58.0
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhcCCe--EEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcc
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETALIAN--YIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~~~~--v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~F 106 (357)
..++.+|||||||+|..+. +. .. .+ |+|+|+++.|++.++++.... .+++++++|+...++...... .+..
T Consensus 19 ~~~~~~VLEIG~G~G~lt~-l~-~~-~~~~v~avEid~~~~~~a~~~~~~~---~~v~~i~~D~~~~~~~~~~~~-~~~~ 91 (252)
T 1qyr_A 19 PQKGQAMVEIGPGLAALTE-PV-GE-RLDQLTVIELDRDLAARLQTHPFLG---PKLTIYQQDAMTFNFGELAEK-MGQP 91 (252)
T ss_dssp CCTTCCEEEECCTTTTTHH-HH-HT-TCSCEEEECCCHHHHHHHHTCTTTG---GGEEEECSCGGGCCHHHHHHH-HTSC
T ss_pred CCCcCEEEEECCCCcHHHH-hh-hC-CCCeEEEEECCHHHHHHHHHHhccC---CceEEEECchhhCCHHHhhcc-cCCc
Confidence 4577899999999998888 54 33 46 999999999999999877542 278999999988766332110 1234
Q ss_pred cEEEEccch
Q 018352 107 DLVCCFQHL 115 (357)
Q Consensus 107 DlV~~~~~l 115 (357)
|.|+++...
T Consensus 92 ~~vvsNlPY 100 (252)
T 1qyr_A 92 LRVFGNLPY 100 (252)
T ss_dssp EEEEEECCT
T ss_pred eEEEECCCC
Confidence 677666543
No 270
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.57 E-value=3e-07 Score=87.23 Aligned_cols=82 Identities=13% Similarity=0.060 Sum_probs=63.1
Q ss_pred CCCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh-cCCcc
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE-KANQA 106 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~-~~~~F 106 (357)
..++.+|||+|||+|+.+..++.. +..+|+|+|+|+.|++.|+++.+..+ .+++|+++|....+ ..+.. ...+|
T Consensus 24 ~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g--~~v~~v~~d~~~l~--~~l~~~g~~~~ 99 (301)
T 1m6y_A 24 PEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS--DRVSLFKVSYREAD--FLLKTLGIEKV 99 (301)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT--TTEEEEECCGGGHH--HHHHHTTCSCE
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCHHHHH--HHHHhcCCCCC
Confidence 347889999999999999888876 35699999999999999999987653 37899999975532 11111 11579
Q ss_pred cEEEEccc
Q 018352 107 DLVCCFQH 114 (357)
Q Consensus 107 DlV~~~~~ 114 (357)
|.|++...
T Consensus 100 D~Vl~D~g 107 (301)
T 1m6y_A 100 DGILMDLG 107 (301)
T ss_dssp EEEEEECS
T ss_pred CEEEEcCc
Confidence 99987653
No 271
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.55 E-value=1.1e-07 Score=97.29 Aligned_cols=113 Identities=14% Similarity=0.018 Sum_probs=79.1
Q ss_pred CCEEEEECCCCChhHHHHHHh--------c--------CCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCch
Q 018352 32 YVTVCDLYCGAGVDVDKWETA--------L--------IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENF 95 (357)
Q Consensus 32 ~~~VLDlGCG~G~~l~k~~~~--------~--------~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~ 95 (357)
..+|||.|||+|+++...... . ...++|+|+++.+++.|+.++.-.+...++.+.++|....+.
T Consensus 245 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~ 324 (544)
T 3khk_A 245 KGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQ 324 (544)
T ss_dssp SEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCS
T ss_pred CCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCcc
Confidence 349999999999988765431 0 347999999999999999887655443344447777665432
Q ss_pred hhhhhhcCCcccEEEEccchhhc------------------------cCCH-HHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 96 ETQMQEKANQADLVCCFQHLQMC------------------------FETE-ERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 96 ~~~l~~~~~~FDlV~~~~~lh~~------------------------fes~-~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
. ...+||+|+++-.+... .... ..--.+++.+.+.|+|||++.+.+|+.
T Consensus 325 ~-----~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g 398 (544)
T 3khk_A 325 H-----PDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANG 398 (544)
T ss_dssp C-----TTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETH
T ss_pred c-----ccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecch
Confidence 1 34789999997543310 0000 011258999999999999999998875
No 272
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.53 E-value=3.1e-07 Score=85.45 Aligned_cols=112 Identities=19% Similarity=0.166 Sum_probs=71.9
Q ss_pred cCCCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcc
Q 018352 28 YSHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (357)
Q Consensus 28 ~~~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~F 106 (357)
++.++.+|||||||.|+.+...+.. +...++|+|++..+..... .......++..+..++....+ ..++|
T Consensus 71 ~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi---~~~~~g~~ii~~~~~~dv~~l------~~~~~ 141 (277)
T 3evf_A 71 YVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPM---NVQSLGWNIITFKDKTDIHRL------EPVKC 141 (277)
T ss_dssp SSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCC---CCCBTTGGGEEEECSCCTTTS------CCCCC
T ss_pred CCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccccc---ccCcCCCCeEEEeccceehhc------CCCCc
Confidence 4567889999999999888766554 5667899999854310000 000011144455665533333 45789
Q ss_pred cEEEEccchhhccCCHHHHH--HHHHHHHhcccCC-cEEEEEeCC
Q 018352 107 DLVCCFQHLQMCFETEERAR--RLLQNVSSLLKPG-GYFLGITPD 148 (357)
Q Consensus 107 DlV~~~~~lh~~fes~~~~~--~~L~~i~~~LkpG-G~fi~t~pd 148 (357)
|+|+|..+.+......+..+ .+|+.+.++|+|| |.|++-+..
T Consensus 142 DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 142 DTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp SEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred cEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 99999886661010123322 4578899999999 999999877
No 273
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.49 E-value=6.7e-07 Score=87.23 Aligned_cols=46 Identities=15% Similarity=0.166 Sum_probs=37.5
Q ss_pred cCCcccEEEEccchhhccCC----------------------------------HHHHHHHHHHHHhcccCCcEEEEEeC
Q 018352 102 KANQADLVCCFQHLQMCFET----------------------------------EERARRLLQNVSSLLKPGGYFLGITP 147 (357)
Q Consensus 102 ~~~~FDlV~~~~~lh~~fes----------------------------------~~~~~~~L~~i~~~LkpGG~fi~t~p 147 (357)
++++||+|.++.++||+-.. ..+...+|+..++.|+|||++++++.
T Consensus 147 P~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~~~ 226 (374)
T 3b5i_A 147 PARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARAAEVKRGGAMFLVCL 226 (374)
T ss_dssp CTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEe
Confidence 47899999999999994211 12567789999999999999999854
No 274
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.48 E-value=4.9e-07 Score=92.35 Aligned_cols=116 Identities=18% Similarity=0.099 Sum_probs=83.9
Q ss_pred CCCEEEEECCCCChhHHHHHHh----cCCeEEEEeCChHHHHHHHHHhHhcCCC-ceeEEEEcCCCCCchhhhhhhcCCc
Q 018352 31 PYVTVCDLYCGAGVDVDKWETA----LIANYIGIDVATSGIGEARDTWENQRKN-FIAEFFEADPCAENFETQMQEKANQ 105 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~----~~~~v~GiDiS~~~l~~A~~r~~~~~~~-~~v~f~~~D~~~~~~~~~l~~~~~~ 105 (357)
++.+|||.|||+|+++...... +...++|+|+++.+++.|+.+..-.+.. .++.+.++|....+... ....+
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~---~~~~~ 297 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPT---QEPTN 297 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCC---SSCCC
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccc---ccccc
Confidence 5679999999999988777654 2468999999999999999877555443 35788999987652100 13578
Q ss_pred ccEEEEccchhhccCC------------------HH-HHHHHHHHHHhccc-CCcEEEEEeCCc
Q 018352 106 ADLVCCFQHLQMCFET------------------EE-RARRLLQNVSSLLK-PGGYFLGITPDS 149 (357)
Q Consensus 106 FDlV~~~~~lh~~fes------------------~~-~~~~~L~~i~~~Lk-pGG~fi~t~pd~ 149 (357)
||+|+++--+...+.. .. .--.++..+.+.|+ +||++.+.+|++
T Consensus 298 fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g 361 (542)
T 3lkd_A 298 FDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHG 361 (542)
T ss_dssp BSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETH
T ss_pred ccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecch
Confidence 9999997432211100 00 01248999999999 999999998886
No 275
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.48 E-value=1.7e-07 Score=92.45 Aligned_cols=79 Identities=16% Similarity=0.061 Sum_probs=61.1
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhc--CCCceeEEEEcCCCCCchhhhhhhcCCcc
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQ--RKNFIAEFFEADPCAENFETQMQEKANQA 106 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~--~~~~~v~f~~~D~~~~~~~~~l~~~~~~F 106 (357)
+.++.+|||+|||+|.++..++.. ..+|+|+|+|+.|++.|+++.+.. +. .+++|+++|+... + ... ..++|
T Consensus 91 l~~g~~VLDLgcG~G~~al~LA~~-g~~V~~VD~s~~~l~~Ar~N~~~~~~gl-~~i~~i~~Da~~~-L-~~~--~~~~f 164 (410)
T 3ll7_A 91 IREGTKVVDLTGGLGIDFIALMSK-ASQGIYIERNDETAVAARHNIPLLLNEG-KDVNILTGDFKEY-L-PLI--KTFHP 164 (410)
T ss_dssp SCTTCEEEESSCSSSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHSCTT-CEEEEEESCGGGS-H-HHH--HHHCC
T ss_pred cCCCCEEEEeCCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHhHHHhccCC-CcEEEEECcHHHh-h-hhc--cCCCc
Confidence 335789999999999888776555 459999999999999999998765 43 4799999998653 1 111 12579
Q ss_pred cEEEEcc
Q 018352 107 DLVCCFQ 113 (357)
Q Consensus 107 DlV~~~~ 113 (357)
|+|++.-
T Consensus 165 DvV~lDP 171 (410)
T 3ll7_A 165 DYIYVDP 171 (410)
T ss_dssp SEEEECC
T ss_pred eEEEECC
Confidence 9999854
No 276
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.42 E-value=1.9e-06 Score=90.82 Aligned_cols=115 Identities=14% Similarity=0.072 Sum_probs=75.8
Q ss_pred CCCCEEEEECCCCChhHHHHHHhc----CCeEEEEeCChHHHHHHHHHhHhc--CC--Cc-eeEEEEcCCCCCchhhhhh
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETAL----IANYIGIDVATSGIGEARDTWENQ--RK--NF-IAEFFEADPCAENFETQMQ 100 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~----~~~v~GiDiS~~~l~~A~~r~~~~--~~--~~-~v~f~~~D~~~~~~~~~l~ 100 (357)
.++.+|||.|||+|+.+..++..- ..+++|+|+++.+++.|+.+.... .. .. ...+...|......
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~----- 394 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNP----- 394 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCG-----
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccc-----
Confidence 457899999999999888876642 247999999999999995443221 11 11 12344444433211
Q ss_pred hcCCcccEEEEccchhhccCCHH-------------------------HHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 101 EKANQADLVCCFQHLQMCFETEE-------------------------RARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 101 ~~~~~FDlV~~~~~lh~~fes~~-------------------------~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
....+||+|+++--+-....... -...+++.+.+.|++||++.+.+|++
T Consensus 395 ~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s 468 (878)
T 3s1s_A 395 EDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQ 468 (878)
T ss_dssp GGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETH
T ss_pred cccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChH
Confidence 02468999999765411011111 12347888999999999999999986
No 277
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.39 E-value=3.5e-06 Score=75.24 Aligned_cols=104 Identities=5% Similarity=-0.116 Sum_probs=72.2
Q ss_pred CCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCC--CceeEEEEcCCCCCc-------------h
Q 018352 31 PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRK--NFIAEFFEADPCAEN-------------F 95 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~--~~~v~f~~~D~~~~~-------------~ 95 (357)
+..+|||+||| ..+..++....++|+.+|.+++..+.|++.++..+. ..+++++.+|+.... +
T Consensus 30 ~a~~VLEiGtG--ySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l 107 (202)
T 3cvo_A 30 EAEVILEYGSG--GSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSY 107 (202)
T ss_dssp HCSEEEEESCS--HHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGT
T ss_pred CCCEEEEECch--HHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhH
Confidence 45799999995 344444433357999999999999999999987765 568999999975421 1
Q ss_pred hh---hh-hh-cCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 96 ET---QM-QE-KANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 96 ~~---~l-~~-~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
.. .+ .. ..++||+|++-... ....+..+.+.|+|||++++.
T Consensus 108 ~~~~~~i~~~~~~~~fDlIfIDg~k---------~~~~~~~~l~~l~~GG~Iv~D 153 (202)
T 3cvo_A 108 PDYPLAVWRTEGFRHPDVVLVDGRF---------RVGCALATAFSITRPVTLLFD 153 (202)
T ss_dssp THHHHGGGGCTTCCCCSEEEECSSS---------HHHHHHHHHHHCSSCEEEEET
T ss_pred HHHhhhhhccccCCCCCEEEEeCCC---------chhHHHHHHHhcCCCeEEEEe
Confidence 10 00 00 13789999887631 124455566899999999654
No 278
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.34 E-value=8.6e-07 Score=91.79 Aligned_cols=102 Identities=15% Similarity=0.101 Sum_probs=73.3
Q ss_pred CCEEEEECCCCChhHHHHHHh---cCC--eEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcc
Q 018352 32 YVTVCDLYCGAGVDVDKWETA---LIA--NYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (357)
Q Consensus 32 ~~~VLDlGCG~G~~l~k~~~~---~~~--~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~F 106 (357)
...|||+|||+|-.....+++ ... +|++|+-|+ +...|++..+.++...+++++++|+.+..+ ++++
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~L-------PEKV 429 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWVA-------PEKA 429 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCCC-------SSCE
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceeccC-------Cccc
Confidence 357999999999664433333 222 689999997 555777777777777789999999988765 4789
Q ss_pred cEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEE
Q 018352 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFL 143 (357)
Q Consensus 107 DlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi 143 (357)
|+|++=. |.|+.-.+. .-.++....+.|||||+++
T Consensus 430 DIIVSEw-MG~fLl~E~-mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 430 DIIVSEL-LGSFADNEL-SPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp EEEECCC-CBTTBGGGC-HHHHHHHHGGGEEEEEEEE
T ss_pred CEEEEEc-CcccccccC-CHHHHHHHHHhcCCCcEEc
Confidence 9998732 223221222 3367888889999999875
No 279
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.32 E-value=3.1e-06 Score=82.69 Aligned_cols=111 Identities=14% Similarity=0.058 Sum_probs=71.6
Q ss_pred CCEEEEECCCCChhHHHHHHh------------------cCCeEEEEeCC-----------hHHHHHHHHHhHhcCCCce
Q 018352 32 YVTVCDLYCGAGVDVDKWETA------------------LIANYIGIDVA-----------TSGIGEARDTWENQRKNFI 82 (357)
Q Consensus 32 ~~~VLDlGCG~G~~l~k~~~~------------------~~~~v~GiDiS-----------~~~l~~A~~r~~~~~~~~~ 82 (357)
..+|+|+||++|..+...... +--+|+..|+. +.+.+.+++. .+...+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~---~g~~~~ 129 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKE---NGRKIG 129 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHH---TCCCTT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhh---ccCCCC
Confidence 578999999999887765443 11357788877 4444433222 111123
Q ss_pred eEEEEcCCCCCchhhhhhhcCCcccEEEEccchhhccCCH-----------------------------------HHHHH
Q 018352 83 AEFFEADPCAENFETQMQEKANQADLVCCFQHLQMCFETE-----------------------------------ERARR 127 (357)
Q Consensus 83 v~f~~~D~~~~~~~~~l~~~~~~FDlV~~~~~lh~~fes~-----------------------------------~~~~~ 127 (357)
..|+.+...+ |...+- +.++||+|.++.++||+-... .+...
T Consensus 130 ~~f~~gvpgS--Fy~rlf-p~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~ 206 (384)
T 2efj_A 130 SCLIGAMPGS--FYSRLF-PEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTT 206 (384)
T ss_dssp SEEEEECCSC--TTSCCS-CTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecchh--hhhccC-CCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHH
Confidence 4667665544 211111 578999999999999942111 12345
Q ss_pred HHHHHHhcccCCcEEEEEeCC
Q 018352 128 LLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 128 ~L~~i~~~LkpGG~fi~t~pd 148 (357)
+|+..++.|+|||++++++..
T Consensus 207 FL~~Ra~eL~pGG~mvl~~~g 227 (384)
T 2efj_A 207 FLRIHSEELISRGRMLLTFIC 227 (384)
T ss_dssp HHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHhccCCeEEEEEec
Confidence 689999999999999999643
No 280
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.31 E-value=7.9e-07 Score=82.82 Aligned_cols=112 Identities=18% Similarity=0.116 Sum_probs=70.7
Q ss_pred cCCCCCEEEEECCCCChhHHHHHH-hcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcc
Q 018352 28 YSHPYVTVCDLYCGAGVDVDKWET-ALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (357)
Q Consensus 28 ~~~~~~~VLDlGCG~G~~l~k~~~-~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~F 106 (357)
++.++.+|||||||.|+.+...+. .+...++|+|++..+...+.. . .....++.....++....+ ...++
T Consensus 87 ~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~-~--~~~g~~ii~~~~~~dv~~l------~~~~~ 157 (282)
T 3gcz_A 87 YVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIM-R--TTLGWNLIRFKDKTDVFNM------EVIPG 157 (282)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-C--CBTTGGGEEEECSCCGGGS------CCCCC
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccc-c--ccCCCceEEeeCCcchhhc------CCCCc
Confidence 456788999999999998887664 356689999998764222210 0 0011133333333221112 45789
Q ss_pred cEEEEccchhhccCCHHHHH--HHHHHHHhcccCC--cEEEEEeCC
Q 018352 107 DLVCCFQHLQMCFETEERAR--RLLQNVSSLLKPG--GYFLGITPD 148 (357)
Q Consensus 107 DlV~~~~~lh~~fes~~~~~--~~L~~i~~~LkpG--G~fi~t~pd 148 (357)
|+|+|-.+.+.-....++.+ .+|.-+.++|+|| |.|++-+..
T Consensus 158 DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 158 DTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp SEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred CEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 99999886651110123333 4588888999999 999999877
No 281
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.31 E-value=1.3e-06 Score=90.75 Aligned_cols=108 Identities=17% Similarity=0.061 Sum_probs=72.5
Q ss_pred CCEEEEECCCCChhHHHHHHh----c----------CCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhh
Q 018352 32 YVTVCDLYCGAGVDVDKWETA----L----------IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET 97 (357)
Q Consensus 32 ~~~VLDlGCG~G~~l~k~~~~----~----------~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~ 97 (357)
...|||+|||+|-.....+.+ + ..+|++||-|+.++..++.+.. ++....++++.+|+.+..+..
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccccc
Confidence 458999999999664322221 2 2389999999988876666554 455557999999997754410
Q ss_pred hhhhcCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEE
Q 018352 98 QMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFL 143 (357)
Q Consensus 98 ~l~~~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi 143 (357)
.. ...++.|+|++-. |.| |-..+-...+|..+.+.|||||++|
T Consensus 489 ~~-~~~ekVDIIVSEl-mGs-fl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 489 KD-RGFEQPDIIVSEL-LGS-FGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HH-TTCCCCSEEEECC-CBT-TBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred cc-CCCCcccEEEEec-ccc-ccchhccHHHHHHHHHhCCCCcEEE
Confidence 00 1157899998854 233 2122334557888899999999875
No 282
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.24 E-value=5.5e-06 Score=80.58 Aligned_cols=126 Identities=13% Similarity=-0.006 Sum_probs=85.5
Q ss_pred CCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcC-------CCceeEEEEcCCCCCchhhhhhhc
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQR-------KNFIAEFFEADPCAENFETQMQEK 102 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~-------~~~~v~f~~~D~~~~~~~~~l~~~ 102 (357)
++..+||=||.|.|+.+...++.+..+++.+||++..++.|++.+.... ...+++++.+|+.. +.......
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~--fl~~~~~~ 281 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIP--VLKRYAKE 281 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHH--HHHHHHHH
T ss_pred CCCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHH--HHHhhhhc
Confidence 3567999999999999999888777899999999999999998754210 01247888888754 21111123
Q ss_pred CCcccEEEEccchhhc------cCCHHHHHHHHHHHHhcccCCcEEEEE--eCCchHHHHHHH
Q 018352 103 ANQADLVCCFQHLQMC------FETEERARRLLQNVSSLLKPGGYFLGI--TPDSSTIWAKYQ 157 (357)
Q Consensus 103 ~~~FDlV~~~~~lh~~------fes~~~~~~~L~~i~~~LkpGG~fi~t--~pd~~~i~~~~~ 157 (357)
.++||+|+.-..-... .....-.+.+++.+.++|+|||+++.. .|........+.
T Consensus 282 ~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~~~~~~~~i~ 344 (381)
T 3c6k_A 282 GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYE 344 (381)
T ss_dssp TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHH
T ss_pred cCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecCCCcchhHHHHHH
Confidence 5689999875311100 001222467899999999999999864 565544444443
No 283
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.22 E-value=2.8e-06 Score=80.07 Aligned_cols=111 Identities=11% Similarity=0.064 Sum_probs=80.8
Q ss_pred CCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhc----CCCceeEEEEcCCCCCchhhhhhhcCC
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQ----RKNFIAEFFEADPCAENFETQMQEKAN 104 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~----~~~~~v~f~~~D~~~~~~~~~l~~~~~ 104 (357)
+...+||=||.|.|+.+..+++. +..+++.+||++..++.|++.+... -...+++++.+|+...- ....+
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l-----~~~~~ 156 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFV-----NQTSQ 156 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTT-----SCSSC
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHH-----hhccc
Confidence 45689999999999999888876 5679999999999999999876431 11347899999987632 12457
Q ss_pred cccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 105 ~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
+||+|+.-..-.......---+.+++.++++|+|||+++..
T Consensus 157 ~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q 197 (294)
T 3o4f_A 157 TFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp CEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEE
T ss_pred cCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEe
Confidence 89999874321100000001246899999999999999976
No 284
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.20 E-value=5.4e-06 Score=80.40 Aligned_cols=115 Identities=17% Similarity=0.023 Sum_probs=80.4
Q ss_pred CCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCC-----CceeEEEEcCCCCCchhhhhhhcC
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRK-----NFIAEFFEADPCAENFETQMQEKA 103 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~-----~~~v~f~~~D~~~~~~~~~l~~~~ 103 (357)
.++.+|||+|||.|+=+..++.. ..+.++++|+|+.-++..+++.+.... ..++.+...|.....- ...
T Consensus 147 ~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~-----~~~ 221 (359)
T 4fzv_A 147 QPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGE-----LEG 221 (359)
T ss_dssp CTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHH-----HST
T ss_pred CCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcch-----hcc
Confidence 47899999999999988777665 335799999999999988887765321 2367778888654221 135
Q ss_pred CcccEEEE----ccchhhcc---------CCH-------HHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 104 NQADLVCC----FQHLQMCF---------ETE-------ERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 104 ~~FDlV~~----~~~lh~~f---------es~-------~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
+.||.|++ ...-+..+ .+. ....++|.++.++|||||+++-+|++-
T Consensus 222 ~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl 287 (359)
T 4fzv_A 222 DTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSL 287 (359)
T ss_dssp TCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred ccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCC
Confidence 78999985 22100000 011 123578999999999999999886653
No 285
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.15 E-value=8.3e-07 Score=82.32 Aligned_cols=114 Identities=10% Similarity=0.011 Sum_probs=70.5
Q ss_pred CCC--CEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhc-------C-CCceeEEEEcCCCCCchhhhh
Q 018352 30 HPY--VTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQ-------R-KNFIAEFFEADPCAENFETQM 99 (357)
Q Consensus 30 ~~~--~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~-------~-~~~~v~f~~~D~~~~~~~~~l 99 (357)
.++ .+|||++||+|.++..++..+. +|+++|+++.+.+.+++..+.. + ...+++++++|+... +
T Consensus 85 ~~g~~~~VLDl~~G~G~dal~lA~~g~-~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~-----L 158 (258)
T 2oyr_A 85 KGDYLPDVVDATAGLGRDAFVLASVGC-RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTA-----L 158 (258)
T ss_dssp BTTBCCCEEETTCTTCHHHHHHHHHTC-CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHH-----S
T ss_pred cCCCCCEEEEcCCcCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHH-----H
Confidence 355 8999999999999988887755 8999999998766655543211 0 113689999997541 1
Q ss_pred hhcCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCchHHHHHHH
Q 018352 100 QEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKYQ 157 (357)
Q Consensus 100 ~~~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~i~~~~~ 157 (357)
.....+||+|++.-.++.- .. ..++++..+.|++.+ +..++.+.+.+...
T Consensus 159 ~~~~~~fDvV~lDP~y~~~--~~---saavkk~~~~lr~l~---~~~~~~~~ll~~a~ 208 (258)
T 2oyr_A 159 TDITPRPQVVYLDPMFPHK--QK---SALVKKEMRVFQSLV---GPDLDADGLLEPAR 208 (258)
T ss_dssp TTCSSCCSEEEECCCCCCC--CC--------HHHHHHHHHS---CCCTTGGGGHHHHH
T ss_pred HhCcccCCEEEEcCCCCCc--cc---chHHHHHHHHHHHhh---cCCccHHHHHHHHH
Confidence 1112469999998755541 11 133444444554433 23666666665554
No 286
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.11 E-value=2e-06 Score=83.34 Aligned_cols=111 Identities=14% Similarity=0.096 Sum_probs=76.0
Q ss_pred CCCEEEEECCCCChhHHHHHHh-----------------cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCC-
Q 018352 31 PYVTVCDLYCGAGVDVDKWETA-----------------LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCA- 92 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~-----------------~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~- 92 (357)
...+|+|+||++|..+...... +--+|+..|+.....+..-+.........+..|+.+...+
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSF 130 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSF 130 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCS
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhh
Confidence 3468999999999765432211 1236889999888888776665431100023555554433
Q ss_pred --CchhhhhhhcCCcccEEEEccchhhccCC-----------------------------HHHHHHHHHHHHhcccCCcE
Q 018352 93 --ENFETQMQEKANQADLVCCFQHLQMCFET-----------------------------EERARRLLQNVSSLLKPGGY 141 (357)
Q Consensus 93 --~~~~~~l~~~~~~FDlV~~~~~lh~~fes-----------------------------~~~~~~~L~~i~~~LkpGG~ 141 (357)
..+ +.+++|+|.++.++||+-.- ..+...+|+..++.|+|||+
T Consensus 131 y~rlf------p~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~ 204 (359)
T 1m6e_X 131 YGRLF------PRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGR 204 (359)
T ss_dssp SSCCS------CTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCE
T ss_pred hhccC------CCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCce
Confidence 333 57899999999999995210 24567789999999999999
Q ss_pred EEEEeC
Q 018352 142 FLGITP 147 (357)
Q Consensus 142 fi~t~p 147 (357)
+++++.
T Consensus 205 mvl~~~ 210 (359)
T 1m6e_X 205 MVLTIL 210 (359)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 998853
No 287
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.99 E-value=6.4e-06 Score=69.60 Aligned_cols=87 Identities=16% Similarity=0.140 Sum_probs=59.5
Q ss_pred CCCCEEEEECCCCC-hhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 30 HPYVTVCDLYCGAG-VDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 30 ~~~~~VLDlGCG~G-~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
.++.+|||||||.| ..+..++......|+++|+++.+++ |++.|+++..+.. -..||+
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~----------------~v~dDiF~P~~~~-----Y~~~DL 92 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG----------------IVRDDITSPRMEI-----YRGAAL 92 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT----------------EECCCSSSCCHHH-----HTTEEE
T ss_pred CCCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc----------------eEEccCCCCcccc-----cCCcCE
Confidence 45679999999999 4666666534458999999987665 7889998855420 147999
Q ss_pred EEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEe
Q 018352 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~ 146 (357)
|.+.. ...++...+.++++.+ |.-+++..
T Consensus 93 IYsir-------PP~El~~~i~~lA~~v--~adliI~p 121 (153)
T 2k4m_A 93 IYSIR-------PPAEIHSSLMRVADAV--GARLIIKP 121 (153)
T ss_dssp EEEES-------CCTTTHHHHHHHHHHH--TCEEEEEC
T ss_pred EEEcC-------CCHHHHHHHHHHHHHc--CCCEEEEc
Confidence 95433 3444555666666644 34566663
No 288
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.96 E-value=2.7e-05 Score=72.98 Aligned_cols=113 Identities=15% Similarity=0.075 Sum_probs=69.9
Q ss_pred HcCCCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCc
Q 018352 27 IYSHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQ 105 (357)
Q Consensus 27 ~~~~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~ 105 (357)
.++.++.+||||||+.|+.+..++.. +...|+|+|++..+...... .. ....++.....++....+ ....
T Consensus 77 ~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~--~~~~~iv~~~~~~di~~l------~~~~ 147 (300)
T 3eld_A 77 GYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQ--TLGWNIVKFKDKSNVFTM------PTEP 147 (300)
T ss_dssp TSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CC--BTTGGGEEEECSCCTTTS------CCCC
T ss_pred CCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-cc--ccCCceEEeecCceeeec------CCCC
Confidence 45678999999999999999888764 56689999998543110000 00 001122222222211112 3578
Q ss_pred ccEEEEccchhhccCCHHHH--HHHHHHHHhcccCC-cEEEEEeCC
Q 018352 106 ADLVCCFQHLQMCFETEERA--RRLLQNVSSLLKPG-GYFLGITPD 148 (357)
Q Consensus 106 FDlV~~~~~lh~~fes~~~~--~~~L~~i~~~LkpG-G~fi~t~pd 148 (357)
+|+|+|..+.+.-....+.. ..+|.-+.++|+|| |.|++-+..
T Consensus 148 ~DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 148 SDTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp CSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred cCEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 99999977655100011222 34578888999999 999999877
No 289
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.90 E-value=2.4e-05 Score=72.36 Aligned_cols=122 Identities=13% Similarity=0.174 Sum_probs=71.5
Q ss_pred CCCEEEEECCCCChhHHHHHHh-------cC------CeEEEEeCCh---HHHHH-----------HHHHhHh-------
Q 018352 31 PYVTVCDLYCGAGVDVDKWETA-------LI------ANYIGIDVAT---SGIGE-----------ARDTWEN------- 76 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~-------~~------~~v~GiDiS~---~~l~~-----------A~~r~~~------- 76 (357)
+..+|||+|||+|..+..+... .. .+|+++|..+ ++++. |++..+.
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 4579999999999766553331 21 4899999766 55553 3444332
Q ss_pred ------cCCCceeEEEEcCCCCCchhhhhhh-cCCcccEEEEc-cchhhccCCHH-HHHHHHHHHHhcccCCcEEEEEeC
Q 018352 77 ------QRKNFIAEFFEADPCAENFETQMQE-KANQADLVCCF-QHLQMCFETEE-RARRLLQNVSSLLKPGGYFLGITP 147 (357)
Q Consensus 77 ------~~~~~~v~f~~~D~~~~~~~~~l~~-~~~~FDlV~~~-~~lh~~fes~~-~~~~~L~~i~~~LkpGG~fi~t~p 147 (357)
.....+++++.+|+... + ..+.. ....||+|+.- |+-.- +.+ -...+++.+.++|+|||+|+. ..
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~-l-~~~~~~~~~~~D~iflD~fsp~~---~p~lw~~~~l~~l~~~L~pGG~l~t-ys 213 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINEL-I-SQLDDSLNQKVDAWFLDGFAPAK---NPDMWTQNLFNAMARLARPGGTLAT-FT 213 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHH-G-GGSCGGGTTCEEEEEECSSCTTT---CGGGCCHHHHHHHHHHEEEEEEEEE-SC
T ss_pred hhheeccCCceEEEEEECcHHHH-H-hhcccccCCeEEEEEECCCCccc---ChhhcCHHHHHHHHHHcCCCcEEEE-Ee
Confidence 01124677888887541 1 11110 01379999874 22110 000 024689999999999999883 33
Q ss_pred CchHHHHHHHH
Q 018352 148 DSSTIWAKYQK 158 (357)
Q Consensus 148 d~~~i~~~~~~ 158 (357)
....+.+.+..
T Consensus 214 aa~~vrr~L~~ 224 (257)
T 2qy6_A 214 SAGFVRRGLQE 224 (257)
T ss_dssp CBHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 33455555543
No 290
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.89 E-value=4.7e-05 Score=71.13 Aligned_cols=77 Identities=10% Similarity=0.016 Sum_probs=59.9
Q ss_pred CCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh-cCCccc
Q 018352 29 SHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE-KANQAD 107 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~-~~~~FD 107 (357)
..++..+||.+||.|+++..++.. .++|+|+|.++.+++.|++ +.. .++.++++|.... ...+.. ...++|
T Consensus 20 ~~~gg~~VD~T~G~GGHS~~il~~-~g~VigiD~Dp~Ai~~A~~-L~~----~rv~lv~~~f~~l--~~~L~~~g~~~vD 91 (285)
T 1wg8_A 20 VRPGGVYVDATLGGAGHARGILER-GGRVIGLDQDPEAVARAKG-LHL----PGLTVVQGNFRHL--KRHLAALGVERVD 91 (285)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHH-TCC----TTEEEEESCGGGH--HHHHHHTTCSCEE
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHC-CCEEEEEeCCHHHHHHHHh-hcc----CCEEEEECCcchH--HHHHHHcCCCCcC
Confidence 457889999999999999999887 5699999999999999998 654 2789999987653 222221 125799
Q ss_pred EEEEcc
Q 018352 108 LVCCFQ 113 (357)
Q Consensus 108 lV~~~~ 113 (357)
.|++..
T Consensus 92 gIL~DL 97 (285)
T 1wg8_A 92 GILADL 97 (285)
T ss_dssp EEEEEC
T ss_pred EEEeCC
Confidence 998643
No 291
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.78 E-value=0.00014 Score=73.89 Aligned_cols=116 Identities=15% Similarity=0.050 Sum_probs=77.5
Q ss_pred CCCEEEEECCCCChhHHHHHHh--------------cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchh
Q 018352 31 PYVTVCDLYCGAGVDVDKWETA--------------LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFE 96 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~--------------~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~ 96 (357)
++.+|+|-+||+|+++...... ....++|+|+++.+...|+-..--.+.. ...+..+|....+..
T Consensus 217 ~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~-~~~I~~~dtL~~~~~ 295 (530)
T 3ufb_A 217 LGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLE-YPRIDPENSLRFPLR 295 (530)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCS-CCEEECSCTTCSCGG
T ss_pred CCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCc-cccccccccccCchh
Confidence 4679999999999998765432 1246999999999999998765433322 345678887665442
Q ss_pred hhhhhcCCcccEEEEccchhhc------------cCCHHHHHHHHHHHHhccc-------CCcEEEEEeCCc
Q 018352 97 TQMQEKANQADLVCCFQHLQMC------------FETEERARRLLQNVSSLLK-------PGGYFLGITPDS 149 (357)
Q Consensus 97 ~~l~~~~~~FDlV~~~~~lh~~------------fes~~~~~~~L~~i~~~Lk-------pGG~fi~t~pd~ 149 (357)
... ...+||+|+++--+... ..+.+..-.++..+.+.|| +||++.+.+|++
T Consensus 296 ~~~--~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~g 365 (530)
T 3ufb_A 296 EMG--DKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNG 365 (530)
T ss_dssp GCC--GGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEHH
T ss_pred hhc--ccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEecch
Confidence 211 23579999997644211 1111122346777777776 799999998875
No 292
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.74 E-value=9.5e-05 Score=69.44 Aligned_cols=54 Identities=15% Similarity=0.241 Sum_probs=44.9
Q ss_pred HHHHHcCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhc
Q 018352 23 ALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQ 77 (357)
Q Consensus 23 ~Li~~~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~ 77 (357)
.+|..+..++..|||++||+|..+......+ .+++|+|+++.+++.|++|++..
T Consensus 227 ~~i~~~~~~~~~vlD~f~GsGt~~~~a~~~g-~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 227 RLVRMFSFVGDVVLDPFAGTGTTLIAAARWG-RRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp HHHHHHCCTTCEEEETTCTTTHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCEEEECCCCCCHHHHHHHHcC-CeEEEEeCCHHHHHHHHHHHHHh
Confidence 4455556788999999999998777766655 49999999999999999998764
No 293
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.71 E-value=0.00028 Score=66.02 Aligned_cols=107 Identities=12% Similarity=-0.023 Sum_probs=76.7
Q ss_pred CCCEEEEECCCCChhHHHHHHh------cCCeEEEEeCCh--------------------------HHHHHHHHHhHhcC
Q 018352 31 PYVTVCDLYCGAGVDVDKWETA------LIANYIGIDVAT--------------------------SGIGEARDTWENQR 78 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~------~~~~v~GiDiS~--------------------------~~l~~A~~r~~~~~ 78 (357)
....|||+||.+|..+..++.. ...+++++|..+ .+++.+++.++..+
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~g 185 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYD 185 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcC
Confidence 3569999999999877666543 256899999642 14677888887765
Q ss_pred C-CceeEEEEcCCCCCchhhhhhhcCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeC
Q 018352 79 K-NFIAEFFEADPCAENFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (357)
Q Consensus 79 ~-~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~p 147 (357)
. ..+++++.+|+.+. + ..+ ..++||+|.+-... | +.....|+.+...|+|||++++.-.
T Consensus 186 l~~~~I~li~Gda~et-L-~~~--~~~~~d~vfIDaD~-y-----~~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 186 LLDEQVRFLPGWFKDT-L-PTA--PIDTLAVLRMDGDL-Y-----ESTWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp CCSTTEEEEESCHHHH-S-TTC--CCCCEEEEEECCCS-H-----HHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred CCcCceEEEEeCHHHH-H-hhC--CCCCEEEEEEcCCc-c-----ccHHHHHHHHHhhcCCCEEEEEcCC
Confidence 5 25799999997431 1 111 24689999876532 3 3356789999999999999988744
No 294
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.67 E-value=0.00024 Score=68.81 Aligned_cols=95 Identities=7% Similarity=-0.120 Sum_probs=63.8
Q ss_pred HcCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcc
Q 018352 27 IYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (357)
Q Consensus 27 ~~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~F 106 (357)
+.+.++.+||||||+.|+.+..+.+.+ .+|+|||+.+-. ..... ..+++++++|+..... ....|
T Consensus 207 ~~l~~G~~vlDLGAaPGGWT~~l~~rg-~~V~aVD~~~l~-----~~l~~---~~~V~~~~~d~~~~~~------~~~~~ 271 (375)
T 4auk_A 207 ERLANGMWAVDLGACPGGWTYQLVKRN-MWVYSVDNGPMA-----QSLMD---TGQVTWLREDGFKFRP------TRSNI 271 (375)
T ss_dssp HHSCTTCEEEEETCTTCHHHHHHHHTT-CEEEEECSSCCC-----HHHHT---TTCEEEECSCTTTCCC------CSSCE
T ss_pred ccCCCCCEEEEeCcCCCHHHHHHHHCC-CEEEEEEhhhcC-----hhhcc---CCCeEEEeCccccccC------CCCCc
Confidence 346789999999999999998887766 499999987421 11111 1278999999877554 35789
Q ss_pred cEEEEccchhhccCCHHHHHHHHHHHHhcccCCcE
Q 018352 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGY 141 (357)
Q Consensus 107 DlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~ 141 (357)
|+|+|-.+.+ ......++......+..++.
T Consensus 272 D~vvsDm~~~-----p~~~~~l~~~wl~~~~~~~a 301 (375)
T 4auk_A 272 SWMVCDMVEK-----PAKVAALMAQWLVNGWCRET 301 (375)
T ss_dssp EEEEECCSSC-----HHHHHHHHHHHHHTTSCSEE
T ss_pred CEEEEcCCCC-----hHHhHHHHHHHHhccccceE
Confidence 9999977433 33343444444444444443
No 295
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.67 E-value=0.00023 Score=66.62 Aligned_cols=118 Identities=21% Similarity=0.189 Sum_probs=74.6
Q ss_pred cCCCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEc-CCCCCchhhhhhhcCCc
Q 018352 28 YSHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEA-DPCAENFETQMQEKANQ 105 (357)
Q Consensus 28 ~~~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~-D~~~~~~~~~l~~~~~~ 105 (357)
++.++.+||||||++|+.+...+.. +...|+|+|+-..--+.= ...++.+. .-+.|... |+.... ..+
T Consensus 91 ~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P-~~~~ql~w-~lV~~~~~~Dv~~l~--------~~~ 160 (321)
T 3lkz_A 91 FLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEP-QLVQSYGW-NIVTMKSGVDVFYRP--------SEC 160 (321)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCC-CCCCBTTG-GGEEEECSCCTTSSC--------CCC
T ss_pred CCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCc-chhhhcCC-cceEEEeccCHhhCC--------CCC
Confidence 4568889999999999988865554 566899999985411000 00001111 13777777 765432 367
Q ss_pred ccEEEEccchhhccCC-H-H--HHHHHHHHHHhcccCC-cEEEEEeCCc--hHHHHHHH
Q 018352 106 ADLVCCFQHLQMCFET-E-E--RARRLLQNVSSLLKPG-GYFLGITPDS--STIWAKYQ 157 (357)
Q Consensus 106 FDlV~~~~~lh~~fes-~-~--~~~~~L~~i~~~LkpG-G~fi~t~pd~--~~i~~~~~ 157 (357)
+|+|+|--+ .. -.+ . + ....+|.-+.+.|++| |-|++-+... ..+.+++.
T Consensus 161 ~D~ivcDig-eS-s~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~pY~~~v~e~l~ 217 (321)
T 3lkz_A 161 CDTLLCDIG-ES-SSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCPYMPKVIEKME 217 (321)
T ss_dssp CSEEEECCC-CC-CSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTSHHHHHHHH
T ss_pred CCEEEEECc-cC-CCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCCCChHHHHHHH
Confidence 999999775 22 112 1 2 2234778888999999 8999887666 66655554
No 296
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.49 E-value=0.00062 Score=61.85 Aligned_cols=117 Identities=20% Similarity=0.145 Sum_probs=73.4
Q ss_pred cCCCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEc-CCCCCchhhhhhhcCCc
Q 018352 28 YSHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEA-DPCAENFETQMQEKANQ 105 (357)
Q Consensus 28 ~~~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~-D~~~~~~~~~l~~~~~~ 105 (357)
++.++.+||||||++|+.+...+.. +..+|+|+|+-..--+.= ...+..+. ..++|..+ |+... +..+
T Consensus 75 ~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P-~~~~s~gw-n~v~fk~gvDv~~~--------~~~~ 144 (267)
T 3p8z_A 75 MVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEP-VPMSTYGW-NIVKLMSGKDVFYL--------PPEK 144 (267)
T ss_dssp SSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCC-CCCCCTTT-TSEEEECSCCGGGC--------CCCC
T ss_pred CCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCc-chhhhcCc-CceEEEeccceeec--------CCcc
Confidence 3568889999999999988866554 566899999975421000 00000111 25889988 87432 2467
Q ss_pred ccEEEEccchhhccCC--HH--HHHHHHHHHHhcccCCcEEEEEeCCc--hHHHHHHH
Q 018352 106 ADLVCCFQHLQMCFET--EE--RARRLLQNVSSLLKPGGYFLGITPDS--STIWAKYQ 157 (357)
Q Consensus 106 FDlV~~~~~lh~~fes--~~--~~~~~L~~i~~~LkpGG~fi~t~pd~--~~i~~~~~ 157 (357)
+|+|+|-.+=- -.+ .+ ...++|+-+.+.|++ |-|++-+... ..+.+++.
T Consensus 145 ~DtllcDIgeS--s~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~p~v~e~l~ 199 (267)
T 3p8z_A 145 CDTLLCDIGES--SPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYMPTVIEHLE 199 (267)
T ss_dssp CSEEEECCCCC--CSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCSHHHHHHHH
T ss_pred ccEEEEecCCC--CCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCChhHHHHHH
Confidence 99999976431 112 12 223478888899999 7888775554 33555553
No 297
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.45 E-value=7.3e-05 Score=68.72 Aligned_cols=113 Identities=20% Similarity=0.138 Sum_probs=66.8
Q ss_pred cCCCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcC-CCce---eEEEEc-CCCCCchhhhhhh
Q 018352 28 YSHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQR-KNFI---AEFFEA-DPCAENFETQMQE 101 (357)
Q Consensus 28 ~~~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~-~~~~---v~f~~~-D~~~~~~~~~l~~ 101 (357)
+++++.+||||||+.|+-+...+.. +...+.|.++.... . ..... .... +.|.++ |++. +
T Consensus 70 likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~-----~~P~~~~~~Gv~~i~~~~G~Df~~--~------ 135 (269)
T 2px2_A 70 FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H-----EEPMLMQSYGWNIVTMKSGVDVFY--K------ 135 (269)
T ss_dssp SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S-----CCCCCCCSTTGGGEEEECSCCGGG--S------
T ss_pred CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c-----cCCCcccCCCceEEEeeccCCccC--C------
Confidence 6789999999999999877665543 23344555555331 0 00000 0012 244546 8765 2
Q ss_pred cCCcccEEEEccchhhccCCHHHHH--HHHHHHHhcccCCc-EEEEEeCCc--hHHHH
Q 018352 102 KANQADLVCCFQHLQMCFETEERAR--RLLQNVSSLLKPGG-YFLGITPDS--STIWA 154 (357)
Q Consensus 102 ~~~~FDlV~~~~~lh~~fes~~~~~--~~L~~i~~~LkpGG-~fi~t~pd~--~~i~~ 154 (357)
...++|+|+|-.+-..-....++++ .+|.-+.++|+||| .|++-+... ..+.+
T Consensus 136 ~~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFqg~~~~~~~ 193 (269)
T 2px2_A 136 PSEISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILCPYMPKVIE 193 (269)
T ss_dssp CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTSHHHHH
T ss_pred CCCCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECCCCchHHHH
Confidence 3468999999764321111122222 26777779999999 898886665 55544
No 298
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.38 E-value=0.00022 Score=66.72 Aligned_cols=112 Identities=16% Similarity=0.073 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHcCC-------CCCEEEEECC------CCChhH-HHHHHhcC-CeEEEEeCChHHHHHHHHHhHhcCCC
Q 018352 16 LYEFAKTALIKIYSH-------PYVTVCDLYC------GAGVDV-DKWETALI-ANYIGIDVATSGIGEARDTWENQRKN 80 (357)
Q Consensus 16 ~~nwvks~Li~~~~~-------~~~~VLDlGC------G~G~~l-~k~~~~~~-~~v~GiDiS~~~l~~A~~r~~~~~~~ 80 (357)
+.|.+|..-+..|+. .+++|||+|+ -.|+.. ..| .+. +.++++|+.+-.. .
T Consensus 87 ~~nv~kytqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS~VLr~~--~p~g~~VVavDL~~~~s---------d--- 152 (344)
T 3r24_A 87 MMNVAKYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTAVLRQW--LPTGTLLVDSDLNDFVS---------D--- 152 (344)
T ss_dssp CHHHHHHHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHHHHHHHH--SCTTCEEEEEESSCCBC---------S---
T ss_pred EeeHHHHHHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcHHHHHHh--CCCCcEEEEeeCccccc---------C---
Confidence 568889888888763 5799999997 445422 222 232 4999999986321 1
Q ss_pred ceeEEEEcCCCCCchhhhhhhcCCcccEEEEccchhhc-------cCCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 81 FIAEFFEADPCAENFETQMQEKANQADLVCCFQHLQMC-------FETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 81 ~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~~~~~lh~~-------fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
.+ .++++|+.... ..++||+|++-.+-.-+ ..+..-.+.++.-+.+.|+|||.|++-+...
T Consensus 153 a~-~~IqGD~~~~~-------~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQG 220 (344)
T 3r24_A 153 AD-STLIGDCATVH-------TANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEH 220 (344)
T ss_dssp SS-EEEESCGGGEE-------ESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSS
T ss_pred CC-eEEEccccccc-------cCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecC
Confidence 12 45999975422 24789999985432110 0112235667888889999999999886554
No 299
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.16 E-value=0.00098 Score=61.23 Aligned_cols=55 Identities=22% Similarity=0.275 Sum_probs=45.1
Q ss_pred HHHHHHcCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhc
Q 018352 22 TALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQ 77 (357)
Q Consensus 22 s~Li~~~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~ 77 (357)
..+|..+..++..|||..||+|..+......+ .+++|+|+++.+++.|++|++..
T Consensus 203 ~~~i~~~~~~~~~vlD~f~GsGtt~~~a~~~g-r~~ig~e~~~~~~~~~~~r~~~~ 257 (260)
T 1g60_A 203 ERIIRASSNPNDLVLDCFMGSGTTAIVAKKLG-RNFIGCDMNAEYVNQANFVLNQL 257 (260)
T ss_dssp HHHHHHHCCTTCEEEESSCTTCHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHC-
T ss_pred HHHHHHhCCCCCEEEECCCCCCHHHHHHHHcC-CeEEEEeCCHHHHHHHHHHHHhc
Confidence 34556667789999999999997777766555 59999999999999999998754
No 300
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.13 E-value=0.00019 Score=84.84 Aligned_cols=104 Identities=21% Similarity=0.241 Sum_probs=57.3
Q ss_pred CCCCEEEEECCCCChhHHHHHHh-c-----CCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCC-chhhhhhhc
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETA-L-----IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAE-NFETQMQEK 102 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~-~-----~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~-~~~~~l~~~ 102 (357)
.+..+||+||.|+|+.+..+... . ...|+.+|+|+...+.|+++++.. +++....|.... .+ .
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~----di~~~~~d~~~~~~~------~ 1308 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL----HVTQGQWDPANPAPG------S 1308 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH----TEEEECCCSSCCCC--------
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc----ccccccccccccccC------C
Confidence 35789999999999876655443 1 347999999999988888887653 344333343321 12 2
Q ss_pred CCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeC
Q 018352 103 ANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITP 147 (357)
Q Consensus 103 ~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~p 147 (357)
...||+|++..++|- ..+....|++++++|||||++++..+
T Consensus 1309 ~~~ydlvia~~vl~~----t~~~~~~l~~~~~lL~p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1309 LGKADLLVCNCALAT----LGDPAVAVGNMAATLKEGGFLLLHTL 1349 (2512)
T ss_dssp ---CCEEEEECC------------------------CCEEEEEEC
T ss_pred CCceeEEEEcccccc----cccHHHHHHHHHHhcCCCcEEEEEec
Confidence 357999999998886 23466789999999999999887643
No 301
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=97.03 E-value=0.0065 Score=58.03 Aligned_cols=112 Identities=14% Similarity=0.168 Sum_probs=78.3
Q ss_pred CCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcC--------------------CCceeEEEEc
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQR--------------------KNFIAEFFEA 88 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~--------------------~~~~v~f~~~ 88 (357)
.+...|+.||||...-...+... +...++-||. ++.++.-++.++... ...+..++.+
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~ 174 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAAC 174 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEEC
T ss_pred CCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEec
Confidence 35678999999998666655543 4447778888 777777666665431 0136789999
Q ss_pred CCCCCchhhh-hhh--cCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 89 DPCAENFETQ-MQE--KANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 89 D~~~~~~~~~-l~~--~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
|+.+...... +.. ......++++-.+++| + +.+...++++.+.+.+ |+|.++..
T Consensus 175 DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~Y-L-~~~~~~~ll~~ia~~~-~~~~~v~~ 231 (334)
T 1rjd_A 175 DLNDITETTRLLDVCTKREIPTIVISECLLCY-M-HNNESQLLINTIMSKF-SHGLWISY 231 (334)
T ss_dssp CTTCHHHHHHHHHTTCCTTSCEEEEEESCGGG-S-CHHHHHHHHHHHHHHC-SSEEEEEE
T ss_pred CCCCcHHHHHHHHhcCCCCCCEEEEEcchhhC-C-CHHHHHHHHHHHHhhC-CCcEEEEE
Confidence 9987433211 111 2356788999999999 5 6888999999999988 77777533
No 302
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.01 E-value=0.0011 Score=63.39 Aligned_cols=77 Identities=16% Similarity=0.060 Sum_probs=56.9
Q ss_pred CCCCEEEEECCCCChhHHHHHHh--cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhc--CCc
Q 018352 30 HPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEK--ANQ 105 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~~~--~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~--~~~ 105 (357)
.++..++|..||.|+++..++.. +.++|+|+|.++.+++.|+ ++. ..++.+++++... +...+... .++
T Consensus 56 ~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL~----~~Rv~lv~~nF~~--l~~~L~~~g~~~~ 128 (347)
T 3tka_A 56 RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TID----DPRFSIIHGPFSA--LGEYVAERDLIGK 128 (347)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TCC----CTTEEEEESCGGG--HHHHHHHTTCTTC
T ss_pred CCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hhc----CCcEEEEeCCHHH--HHHHHHhcCCCCc
Confidence 57899999999999999998876 4579999999999999984 442 2368888888654 32222221 136
Q ss_pred ccEEEEcc
Q 018352 106 ADLVCCFQ 113 (357)
Q Consensus 106 FDlV~~~~ 113 (357)
+|.|+...
T Consensus 129 vDgILfDL 136 (347)
T 3tka_A 129 IDGILLDL 136 (347)
T ss_dssp EEEEEEEC
T ss_pred ccEEEECC
Confidence 88887654
No 303
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=96.58 E-value=0.047 Score=51.51 Aligned_cols=110 Identities=10% Similarity=0.014 Sum_probs=79.2
Q ss_pred CEEEEECCCCChhHHHHHHh-c-CCeEEEEeCChHHHHHHHHHhHhcC--CCceeEEEEcCCCCCchhhhhhhc---CCc
Q 018352 33 VTVCDLYCGAGVDVDKWETA-L-IANYIGIDVATSGIGEARDTWENQR--KNFIAEFFEADPCAENFETQMQEK---ANQ 105 (357)
Q Consensus 33 ~~VLDlGCG~G~~l~k~~~~-~-~~~v~GiDiS~~~l~~A~~r~~~~~--~~~~v~f~~~D~~~~~~~~~l~~~---~~~ 105 (357)
..|++||||-= +..+... + ..+++=+| -++.++..++.+.+.. ...+..++.+|+.. .....+... ...
T Consensus 104 ~QvV~LGaGlD--Tra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~ 179 (310)
T 2uyo_A 104 RQFVILASGLD--SRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPSA 179 (310)
T ss_dssp CEEEEETCTTC--CHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTTS
T ss_pred CeEEEeCCCCC--chhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCCC
Confidence 57999999964 4433322 2 35899999 5899998888886421 13367889999987 544433221 134
Q ss_pred ccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCC
Q 018352 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 106 FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
--++++-.++|| + +.++...+++.+...+.||+++++...+
T Consensus 180 Pt~~i~Egvl~Y-l-~~~~~~~ll~~l~~~~~~gs~l~~d~~~ 220 (310)
T 2uyo_A 180 RTAWLAEGLLMY-L-PATAQDGLFTEIGGLSAVGSRIAVETSP 220 (310)
T ss_dssp CEEEEECSCGGG-S-CHHHHHHHHHHHHHTCCTTCEEEEECCC
T ss_pred CEEEEEechHhh-C-CHHHHHHHHHHHHHhCCCCeEEEEEecC
Confidence 557778888999 6 5678899999999999999999988544
No 304
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.43 E-value=0.016 Score=56.15 Aligned_cols=78 Identities=15% Similarity=0.062 Sum_probs=57.9
Q ss_pred CEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhh--hcCCcccEEE
Q 018352 33 VTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQ--EKANQADLVC 110 (357)
Q Consensus 33 ~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~--~~~~~FDlV~ 110 (357)
.+|+||.||.|+...-+..+++..+.++|+++.+++..+.++. +..++++|+.......... .....+|+|+
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~~------~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ 76 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINFP------RSLHVQEDVSLLNAEIIKGFFKNDMPIDGII 76 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHCT------TSEEECCCGGGCCHHHHHHHHCSCCCCCEEE
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhCC------CCceEecChhhcCHHHHHhhcccCCCeeEEE
Confidence 5899999999999999988898788899999998887766653 3567889987654322110 0246799999
Q ss_pred Eccchh
Q 018352 111 CFQHLQ 116 (357)
Q Consensus 111 ~~~~lh 116 (357)
...-.+
T Consensus 77 ggpPCQ 82 (376)
T 3g7u_A 77 GGPPCQ 82 (376)
T ss_dssp ECCCCC
T ss_pred ecCCCC
Confidence 765444
No 305
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.03 E-value=0.012 Score=56.33 Aligned_cols=77 Identities=16% Similarity=0.128 Sum_probs=55.7
Q ss_pred CCEEEEECCCCChhHHHHHHhc--CCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEE
Q 018352 32 YVTVCDLYCGAGVDVDKWETAL--IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 32 ~~~VLDlGCG~G~~l~k~~~~~--~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
..+||||.||.|+....+..++ +..+.++|+++.+++..+.++.. ..++.+|+....... +. ...+|+|
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~------~~~~~~Di~~~~~~~-~~--~~~~D~l 72 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH------TQLLAKTIEGITLEE-FD--RLSFDMI 72 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT------SCEECSCGGGCCHHH-HH--HHCCSEE
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccc------cccccCCHHHccHhH-cC--cCCcCEE
Confidence 3589999999999998888887 45799999999999988877643 346788887643211 11 1269999
Q ss_pred EEccchhh
Q 018352 110 CCFQHLQM 117 (357)
Q Consensus 110 ~~~~~lh~ 117 (357)
+..+-.+-
T Consensus 73 ~~gpPCq~ 80 (343)
T 1g55_A 73 LMSPPCQP 80 (343)
T ss_dssp EECCC---
T ss_pred EEcCCCcc
Confidence 98765443
No 306
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=95.63 E-value=0.027 Score=53.47 Aligned_cols=72 Identities=15% Similarity=0.050 Sum_probs=54.3
Q ss_pred CCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEEEE
Q 018352 32 YVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVCC 111 (357)
Q Consensus 32 ~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~~ 111 (357)
..+||||.||.|+....+..+++..+.++|+++.+++..+.++... ..+|+...... .-..+|+|+.
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~--------~~~Di~~~~~~-----~~~~~D~l~~ 77 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEK--------PEGDITQVNEK-----TIPDHDILCA 77 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCC--------CBSCGGGSCGG-----GSCCCSEEEE
T ss_pred CCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCC--------CcCCHHHcCHh-----hCCCCCEEEE
Confidence 4799999999999999998889888999999999998887776432 15777653321 1235999987
Q ss_pred ccchh
Q 018352 112 FQHLQ 116 (357)
Q Consensus 112 ~~~lh 116 (357)
.+-.+
T Consensus 78 gpPCQ 82 (327)
T 2c7p_A 78 GFPCQ 82 (327)
T ss_dssp ECCCT
T ss_pred CCCCC
Confidence 65443
No 307
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=95.43 E-value=0.033 Score=53.52 Aligned_cols=59 Identities=19% Similarity=0.204 Sum_probs=49.3
Q ss_pred CCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCc
Q 018352 32 YVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAEN 94 (357)
Q Consensus 32 ~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~ 94 (357)
+..|||||.|.|..+..++.. ...+++++++++.++...++... . .+++++.+|+...+
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~~-~---~~l~ii~~D~l~~~ 118 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKFE-G---SPLQILKRDPYDWS 118 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHTT-T---SSCEEECSCTTCHH
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhcc-C---CCEEEEECCccchh
Confidence 589999999999999999875 45689999999999998888762 1 27899999996643
No 308
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.42 E-value=0.024 Score=53.62 Aligned_cols=55 Identities=13% Similarity=0.215 Sum_probs=44.9
Q ss_pred HHHHHHcCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhc
Q 018352 22 TALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQ 77 (357)
Q Consensus 22 s~Li~~~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~ 77 (357)
..+|..+..++..|||.-||+|..+......+ .+++|+|+++..++.|++|++..
T Consensus 243 ~~~i~~~~~~~~~VlDpF~GsGtt~~aa~~~g-r~~ig~e~~~~~~~~~~~r~~~~ 297 (323)
T 1boo_A 243 EFFIRMLTEPDDLVVDIFGGSNTTGLVAERES-RKWISFEMKPEYVAASAFRFLDN 297 (323)
T ss_dssp HHHHHHHCCTTCEEEETTCTTCHHHHHHHHTT-CEEEEEESCHHHHHHHHGGGSCS
T ss_pred HHHHHHhCCCCCEEEECCCCCCHHHHHHHHcC-CCEEEEeCCHHHHHHHHHHHHhc
Confidence 34556667789999999999997777665555 49999999999999999998643
No 309
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=95.18 E-value=0.039 Score=52.48 Aligned_cols=77 Identities=12% Similarity=0.100 Sum_probs=56.0
Q ss_pred CCCEEEEECCCCChhHHHHHHhcC--CeE-EEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCccc
Q 018352 31 PYVTVCDLYCGAGVDVDKWETALI--ANY-IGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~~~--~~v-~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FD 107 (357)
...+|+||.||.|+...-+..+++ ..+ .++|+++.+++..+.++... ++.+|+....... +. ...+|
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~-------~~~~DI~~~~~~~-i~--~~~~D 78 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE-------VQVKNLDSISIKQ-IE--SLNCN 78 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC-------CBCCCTTTCCHHH-HH--HTCCC
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC-------cccCChhhcCHHH-hc--cCCCC
Confidence 456899999999999998888875 566 79999999888777766421 5678887765422 21 13699
Q ss_pred EEEEccchhh
Q 018352 108 LVCCFQHLQM 117 (357)
Q Consensus 108 lV~~~~~lh~ 117 (357)
+++..+-.+-
T Consensus 79 il~ggpPCQ~ 88 (327)
T 3qv2_A 79 TWFMSPPCQP 88 (327)
T ss_dssp EEEECCCCTT
T ss_pred EEEecCCccC
Confidence 9997654443
No 310
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=95.15 E-value=0.04 Score=52.15 Aligned_cols=55 Identities=25% Similarity=0.281 Sum_probs=43.8
Q ss_pred HHHHHHcCCCCCEEEEECCCCChhHHHHHHhcCCeEEEEeCCh---HHHHHHHHHhHhc
Q 018352 22 TALIKIYSHPYVTVCDLYCGAGVDVDKWETALIANYIGIDVAT---SGIGEARDTWENQ 77 (357)
Q Consensus 22 s~Li~~~~~~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~---~~l~~A~~r~~~~ 77 (357)
..+|..+..++..|||.-||+|..+......+ .+++|+|+++ ..++.|++|++..
T Consensus 233 ~~~i~~~~~~~~~vlDpF~GsGtt~~aa~~~~-r~~ig~e~~~~~~~~~~~~~~Rl~~~ 290 (319)
T 1eg2_A 233 ERLVRALSHPGSTVLDFFAGSGVTARVAIQEG-RNSICTDAAPVFKEYYQKQLTFLQDD 290 (319)
T ss_dssp HHHHHHHSCTTCEEEETTCTTCHHHHHHHHHT-CEEEEEESSTHHHHHHHHHHHHC---
T ss_pred HHHHHHhCCCCCEEEecCCCCCHHHHHHHHcC-CcEEEEECCccHHHHHHHHHHHHHHc
Confidence 34566667889999999999997777766655 4899999999 9999999998643
No 311
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=95.01 E-value=0.0084 Score=55.87 Aligned_cols=107 Identities=8% Similarity=-0.016 Sum_probs=74.8
Q ss_pred CCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEEEE
Q 018352 32 YVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVCC 111 (357)
Q Consensus 32 ~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~~ 111 (357)
+..+||+-+|+|......+. +..+++.+|.++..++..++.++. ..++.++..|+... + ..+..+..+||+|++
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS-~~d~~vfvE~~~~a~~~L~~Nl~~---~~~~~V~~~D~~~~-L-~~l~~~~~~fdLVfi 165 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLR-SQDRLYLCELHPTEYNFLLKLPHF---NKKVYVNHTDGVSK-L-NALLPPPEKRGLIFI 165 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSC-TTSEEEEECCSHHHHHHHTTSCCT---TSCEEEECSCHHHH-H-HHHCSCTTSCEEEEE
T ss_pred CCCceeEeCCcHHHHHHHcC-CCCeEEEEeCCHHHHHHHHHHhCc---CCcEEEEeCcHHHH-H-HHhcCCCCCccEEEE
Confidence 45789999999988777666 558999999999999888777654 23688888886431 1 111123457999998
Q ss_pred ccchhhccCCHHHHHHHHHHHHh--cccCCcEEEEEeCC
Q 018352 112 FQHLQMCFETEERARRLLQNVSS--LLKPGGYFLGITPD 148 (357)
Q Consensus 112 ~~~lh~~fes~~~~~~~L~~i~~--~LkpGG~fi~t~pd 148 (357)
--. ++..+...++++.+.+ .+.++|++++-.|-
T Consensus 166 DPP----Ye~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi 200 (283)
T 2oo3_A 166 DPS----YERKEEYKEIPYAIKNAYSKFSTGLYCVWYPV 200 (283)
T ss_dssp CCC----CCSTTHHHHHHHHHHHHHHHCTTSEEEEEEEE
T ss_pred CCC----CCCCcHHHHHHHHHHHhCccCCCeEEEEEEec
Confidence 763 3323345666666665 45689999988543
No 312
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=94.81 E-value=0.063 Score=50.39 Aligned_cols=72 Identities=14% Similarity=0.026 Sum_probs=54.2
Q ss_pred CEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEEEEc
Q 018352 33 VTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVCCF 112 (357)
Q Consensus 33 ~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~~~ 112 (357)
++||||-||.|+...-+..+++.-+.++|+++.+++.-+.++ ...++.+|+...... .-...|+++..
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~-------~~~~~~~DI~~i~~~-----~~~~~D~l~gg 68 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNH-------SAKLIKGDISKISSD-----EFPKCDGIIGG 68 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHC-------CSEEEESCGGGCCGG-----GSCCCSEEECC
T ss_pred CeEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHC-------CCCcccCChhhCCHh-----hCCcccEEEec
Confidence 479999999999999998889878889999998877655554 235688998765432 12468999865
Q ss_pred cchh
Q 018352 113 QHLQ 116 (357)
Q Consensus 113 ~~lh 116 (357)
+-.+
T Consensus 69 pPCQ 72 (331)
T 3ubt_Y 69 PPSQ 72 (331)
T ss_dssp CCGG
T ss_pred CCCC
Confidence 5333
No 313
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=94.61 E-value=0.11 Score=48.63 Aligned_cols=77 Identities=17% Similarity=0.091 Sum_probs=56.1
Q ss_pred CCCEEEEECCCCChhHHHHHHhcCCe--EEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 31 PYVTVCDLYCGAGVDVDKWETALIAN--YIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~~~~~--v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
...+|+||.||.|+....+..+++.. +.++|+++.+++.-+.++. ...++.+|+....... +. ..+.+|+
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~------~~~~~~~DI~~i~~~~-i~-~~~~~Dl 86 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQ------GKIMYVGDVRSVTQKH-IQ-EWGPFDL 86 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTT------TCEEEECCGGGCCHHH-HH-HTCCCSE
T ss_pred CCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCC------CCceeCCChHHccHHH-hc-ccCCcCE
Confidence 45689999999999998888888766 7999999998876655543 2357889987754321 22 1257999
Q ss_pred EEEccch
Q 018352 109 VCCFQHL 115 (357)
Q Consensus 109 V~~~~~l 115 (357)
++..+-.
T Consensus 87 l~ggpPC 93 (295)
T 2qrv_A 87 VIGGSPC 93 (295)
T ss_dssp EEECCCC
T ss_pred EEecCCC
Confidence 9976533
No 314
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=94.36 E-value=0.34 Score=44.38 Aligned_cols=119 Identities=13% Similarity=0.100 Sum_probs=73.6
Q ss_pred HHHHHcCCCCCEEEEECCCCChhHHHHHHh--------cCCeEEEEe-----CCh----------------------HHH
Q 018352 23 ALIKIYSHPYVTVCDLYCGAGVDVDKWETA--------LIANYIGID-----VAT----------------------SGI 67 (357)
Q Consensus 23 ~Li~~~~~~~~~VLDlGCG~G~~l~k~~~~--------~~~~v~GiD-----iS~----------------------~~l 67 (357)
.|.++...-...|+|+||-.|+.+..++.. ...+++|+| ... +.+
T Consensus 61 ~l~~~i~~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l 140 (257)
T 3tos_A 61 ALYRQVLDVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYL 140 (257)
T ss_dssp HHHHHTTTSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHH
T ss_pred HHHHHhhCCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHH
Confidence 344444454579999999999877776542 246899999 321 112
Q ss_pred HHHHHHh---HhcCC-CceeEEEEcCCCCCchhhhhhh-cCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEE
Q 018352 68 GEARDTW---ENQRK-NFIAEFFEADPCAENFETQMQE-KANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYF 142 (357)
Q Consensus 68 ~~A~~r~---~~~~~-~~~v~f~~~D~~~~~~~~~l~~-~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~f 142 (357)
++..+.. +..+. ..+++++.+++... +...+.. +..+||+|.+-.- +| +.....++.+...|+|||++
T Consensus 141 ~~~l~~~~~~~~~g~~~~~i~li~G~~~dT-L~~~l~~~~~~~~dlv~ID~D-~Y-----~~t~~~le~~~p~l~~GGvI 213 (257)
T 3tos_A 141 KEVLDAHECSDFFGHVTQRSVLVEGDVRET-VPRYLAENPQTVIALAYFDLD-LY-----EPTKAVLEAIRPYLTKGSIV 213 (257)
T ss_dssp HHHHHHHHTTSTTTTSCCSEEEEESCHHHH-HHHHHHHCTTCCEEEEEECCC-CH-----HHHHHHHHHHGGGEEEEEEE
T ss_pred HHHHHHHhhhhhcCCCCCcEEEEEecHHHH-HHHHHHhCCCCceEEEEEcCc-cc-----chHHHHHHHHHHHhCCCcEE
Confidence 2221111 11122 24799999987431 2111111 2457999987663 23 34567889999999999999
Q ss_pred EEEeCC
Q 018352 143 LGITPD 148 (357)
Q Consensus 143 i~t~pd 148 (357)
++.-.+
T Consensus 214 v~DD~~ 219 (257)
T 3tos_A 214 AFDELD 219 (257)
T ss_dssp EESSTT
T ss_pred EEcCCC
Confidence 988543
No 315
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.34 E-value=0.31 Score=39.62 Aligned_cols=103 Identities=10% Similarity=-0.007 Sum_probs=65.1
Q ss_pred CCEEEEECCCC-ChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEEE
Q 018352 32 YVTVCDLYCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (357)
Q Consensus 32 ~~~VLDlGCG~-G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~ 110 (357)
..+|+=+|||. |..+.+.+......|+++|.+++.++.+++ . .+.++.+|.......... .-..+|+|+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~----g~~~i~gd~~~~~~l~~a--~i~~ad~vi 76 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----R----GVRAVLGNAANEEIMQLA--HLECAKWLI 76 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T----TCEEEESCTTSHHHHHHT--TGGGCSEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----c----CCCEEECCCCCHHHHHhc--CcccCCEEE
Confidence 35799999986 555555555544599999999998877654 2 356789998775442221 124689887
Q ss_pred EccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCchH
Q 018352 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSST 151 (357)
Q Consensus 111 ~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~ 151 (357)
+.. .+...... +-...+.+.|+..++....+...
T Consensus 77 ~~~------~~~~~n~~-~~~~a~~~~~~~~iiar~~~~~~ 110 (140)
T 3fwz_A 77 LTI------PNGYEAGE-IVASARAKNPDIEIIARAHYDDE 110 (140)
T ss_dssp ECC------SCHHHHHH-HHHHHHHHCSSSEEEEEESSHHH
T ss_pred EEC------CChHHHHH-HHHHHHHHCCCCeEEEEECCHHH
Confidence 643 12222222 33355667788887777666543
No 316
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=94.22 E-value=0.13 Score=48.38 Aligned_cols=98 Identities=13% Similarity=0.074 Sum_probs=63.5
Q ss_pred CCCCCEEEEECCCC-ChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCccc
Q 018352 29 SHPYVTVCDLYCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (357)
Q Consensus 29 ~~~~~~VLDlGCG~-G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FD 107 (357)
+.++.+||-.|||. |..+..+++....+|+++|.+++.++.+++.-. . .. .|....++...+....+.+|
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa------~-~~--i~~~~~~~~~~~~~~~g~~d 234 (340)
T 3s2e_A 164 TRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGA------E-VA--VNARDTDPAAWLQKEIGGAH 234 (340)
T ss_dssp CCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTC------S-EE--EETTTSCHHHHHHHHHSSEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCC------C-EE--EeCCCcCHHHHHHHhCCCCC
Confidence 45789999999975 666677777655599999999998888765321 1 11 23233333332222224789
Q ss_pred EEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 108 LVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 108 lV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
+|+.... . ...++.+.++|++||+++..
T Consensus 235 ~vid~~g------~----~~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 235 GVLVTAV------S----PKAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp EEEESSC------C----HHHHHHHHHHEEEEEEEEEC
T ss_pred EEEEeCC------C----HHHHHHHHHHhccCCEEEEe
Confidence 9875431 1 12467777899999999866
No 317
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=94.06 E-value=0.069 Score=50.83 Aligned_cols=73 Identities=11% Similarity=0.177 Sum_probs=53.2
Q ss_pred CEEEEECCCCChhHHHHHHhcC--CeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEEE
Q 018352 33 VTVCDLYCGAGVDVDKWETALI--ANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (357)
Q Consensus 33 ~~VLDlGCG~G~~l~k~~~~~~--~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~ 110 (357)
.+|+|+.||.|+...-+..++. ..+.++|+++.+++.-+.++.. ..++.+|+....... ++ ...+|+++
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~------~~~~~~DI~~~~~~~-~~--~~~~D~l~ 74 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPE------TNLLNRNIQQLTPQV-IK--KWNVDTIL 74 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT------SCEECCCGGGCCHHH-HH--HTTCCEEE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCC------CceeccccccCCHHH-hc--cCCCCEEE
Confidence 5899999999999988888876 5688999999988777666542 245678887654321 21 23699998
Q ss_pred Eccc
Q 018352 111 CFQH 114 (357)
Q Consensus 111 ~~~~ 114 (357)
..+-
T Consensus 75 ggpP 78 (333)
T 4h0n_A 75 MSPP 78 (333)
T ss_dssp ECCC
T ss_pred ecCC
Confidence 6553
No 318
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=93.91 E-value=0.18 Score=47.20 Aligned_cols=97 Identities=13% Similarity=-0.037 Sum_probs=61.5
Q ss_pred CCCCCEEEEECCC--CChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCC-Cchhhhhhh-cCC
Q 018352 29 SHPYVTVCDLYCG--AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCA-ENFETQMQE-KAN 104 (357)
Q Consensus 29 ~~~~~~VLDlGCG--~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~-~~~~~~l~~-~~~ 104 (357)
+.++.+||-.||+ .|..+..+++....+|+++|.+++.++.++ .+.. . ...|..+ ..+...+.. ..+
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~-~~g~-----~---~~~d~~~~~~~~~~~~~~~~~ 213 (333)
T 1v3u_A 143 VKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK-QIGF-----D---AAFNYKTVNSLEEALKKASPD 213 (333)
T ss_dssp CCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTC-----S---EEEETTSCSCHHHHHHHHCTT
T ss_pred CCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcCC-----c---EEEecCCHHHHHHHHHHHhCC
Confidence 4578999999983 455555665654459999999998888773 3211 1 1234443 333222221 125
Q ss_pred cccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 105 ~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
.+|+|+...+- ..+..+.++|++||+++..
T Consensus 214 ~~d~vi~~~g~-----------~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 214 GYDCYFDNVGG-----------EFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp CEEEEEESSCH-----------HHHHHHHTTEEEEEEEEEC
T ss_pred CCeEEEECCCh-----------HHHHHHHHHHhcCCEEEEE
Confidence 79999865531 1367778999999999865
No 319
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=93.74 E-value=0.21 Score=47.53 Aligned_cols=98 Identities=12% Similarity=0.088 Sum_probs=62.8
Q ss_pred CCCCCEEEEECCCC-ChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh-cCCc
Q 018352 29 SHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE-KANQ 105 (357)
Q Consensus 29 ~~~~~~VLDlGCG~-G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~-~~~~ 105 (357)
+.++.+||-+|||. |..+..+++. +..+|+++|.+++.++.|++.-. . .++ |....++...+.. ..+.
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa------~-~vi--~~~~~~~~~~~~~~~~gg 258 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGA------T-HVI--NSKTQDPVAAIKEITDGG 258 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTC------S-EEE--ETTTSCHHHHHHHHTTSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCC------C-EEe--cCCccCHHHHHHHhcCCC
Confidence 45789999999875 5566666665 44479999999999888865421 1 122 2222233222221 1237
Q ss_pred ccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 106 FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
+|+|+..-+ . ...+..+.++|++||+++..
T Consensus 259 ~D~vid~~g------~----~~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 259 VNFALESTG------S----PEILKQGVDALGILGKIAVV 288 (371)
T ss_dssp EEEEEECSC------C----HHHHHHHHHTEEEEEEEEEC
T ss_pred CcEEEECCC------C----HHHHHHHHHHHhcCCEEEEe
Confidence 999976442 1 13467778899999999866
No 320
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=93.64 E-value=0.15 Score=43.86 Aligned_cols=97 Identities=15% Similarity=0.088 Sum_probs=59.7
Q ss_pred CCCCCEEEEECCC--CChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh--cCC
Q 018352 29 SHPYVTVCDLYCG--AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KAN 104 (357)
Q Consensus 29 ~~~~~~VLDlGCG--~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~--~~~ 104 (357)
+.++.+||..|++ .|..+..++.....+|+++|.+++.++.+++ .+. .. ..|.........+.. ...
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~----~g~--~~---~~d~~~~~~~~~~~~~~~~~ 106 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR----LGV--EY---VGDSRSVDFADEILELTDGY 106 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT----TCC--SE---EEETTCSTHHHHHHHHTTTC
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCC--CE---EeeCCcHHHHHHHHHHhCCC
Confidence 4578899999953 3555555555544589999999988776643 111 11 124433333222211 124
Q ss_pred cccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 105 ~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
.+|+|+...+- ..++.+.++|++||+++..
T Consensus 107 ~~D~vi~~~g~-----------~~~~~~~~~l~~~G~~v~~ 136 (198)
T 1pqw_A 107 GVDVVLNSLAG-----------EAIQRGVQILAPGGRFIEL 136 (198)
T ss_dssp CEEEEEECCCT-----------HHHHHHHHTEEEEEEEEEC
T ss_pred CCeEEEECCch-----------HHHHHHHHHhccCCEEEEE
Confidence 69999865421 2467788899999998865
No 321
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=92.73 E-value=0.26 Score=46.12 Aligned_cols=98 Identities=10% Similarity=-0.076 Sum_probs=62.7
Q ss_pred CCCCCEEEEECCC--CChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh-cCCc
Q 018352 29 SHPYVTVCDLYCG--AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE-KANQ 105 (357)
Q Consensus 29 ~~~~~~VLDlGCG--~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~-~~~~ 105 (357)
+.++.+||-.||+ -|..+..+++....+|+++|.+++-++.+.+.+.. . ...|.....+...+.. ..+.
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~-----~---~~~~~~~~~~~~~~~~~~~~~ 218 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGF-----D---GAIDYKNEDLAAGLKRECPKG 218 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCC-----S---EEEETTTSCHHHHHHHHCTTC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCC-----C---EEEECCCHHHHHHHHHhcCCC
Confidence 4578999999983 45566666666555999999999888776333211 1 1123333333332221 1357
Q ss_pred ccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 106 FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
+|+|+...+- ..+..+.++|++||+++..
T Consensus 219 ~d~vi~~~g~-----------~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 219 IDVFFDNVGG-----------EILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp EEEEEESSCH-----------HHHHHHHTTEEEEEEEEEC
T ss_pred ceEEEECCCc-----------chHHHHHHHHhhCCEEEEE
Confidence 9999765421 2477788999999999866
No 322
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=92.58 E-value=0.26 Score=46.24 Aligned_cols=98 Identities=11% Similarity=0.013 Sum_probs=61.4
Q ss_pred CCCCCEEEEECCC--CChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCC-chhhhhhh-cCC
Q 018352 29 SHPYVTVCDLYCG--AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAE-NFETQMQE-KAN 104 (357)
Q Consensus 29 ~~~~~~VLDlGCG--~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~-~~~~~l~~-~~~ 104 (357)
+.++.+||-.||+ .|..+..+++....+|+++|.+++.++.+++.+.. . .. .|.... .+...+.. ..+
T Consensus 153 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~-----~-~~--~d~~~~~~~~~~~~~~~~~ 224 (345)
T 2j3h_A 153 PKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGF-----D-DA--FNYKEESDLTAALKRCFPN 224 (345)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCC-----S-EE--EETTSCSCSHHHHHHHCTT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCC-----c-eE--EecCCHHHHHHHHHHHhCC
Confidence 3578999999983 45555666665445999999999888777543311 1 11 233321 22222211 125
Q ss_pred cccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 105 ~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
.+|+|+...+- ..++.+.++|++||+++..
T Consensus 225 ~~d~vi~~~g~-----------~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 225 GIDIYFENVGG-----------KMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp CEEEEEESSCH-----------HHHHHHHTTEEEEEEEEEC
T ss_pred CCcEEEECCCH-----------HHHHHHHHHHhcCCEEEEE
Confidence 69999765421 2467788899999998865
No 323
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=92.55 E-value=0.21 Score=48.19 Aligned_cols=106 Identities=15% Similarity=0.010 Sum_probs=63.2
Q ss_pred CCCCCEEEEECCCC-ChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCch-hhhhhh--cC
Q 018352 29 SHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENF-ETQMQE--KA 103 (357)
Q Consensus 29 ~~~~~~VLDlGCG~-G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~-~~~l~~--~~ 103 (357)
+.++.+||-+|||. |..+..+++. +..+|+++|.+++.++.+++. .++.+ |....++ ...+.. ..
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l--------Ga~~i--~~~~~~~~~~~~~~~~~g 252 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDA--------GFETI--DLRNSAPLRDQIDQILGK 252 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTT--------TCEEE--ETTSSSCHHHHHHHHHSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc--------CCcEE--cCCCcchHHHHHHHHhCC
Confidence 45789999999975 6566666665 444899999999988777532 12222 3222222 222211 12
Q ss_pred CcccEEEEccchhhccCC-H----HHHHHHHHHHHhcccCCcEEEEE
Q 018352 104 NQADLVCCFQHLQMCFET-E----ERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 104 ~~FDlV~~~~~lh~~fes-~----~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
..+|+|+..-+-.. ... . ......+..+.++|++||+++..
T Consensus 253 ~g~Dvvid~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 253 PEVDCGVDAVGFEA-HGLGDEANTETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp SCEEEEEECSCTTC-BCSGGGTTSBCTTHHHHHHHHHEEEEEEEECC
T ss_pred CCCCEEEECCCCcc-ccccccccccccHHHHHHHHHHHhcCCEEEEe
Confidence 36999986553221 000 0 00112467778899999998755
No 324
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=92.37 E-value=0.74 Score=43.14 Aligned_cols=99 Identities=16% Similarity=0.172 Sum_probs=62.7
Q ss_pred cCCCCCEEEEECCCC-ChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcc
Q 018352 28 YSHPYVTVCDLYCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (357)
Q Consensus 28 ~~~~~~~VLDlGCG~-G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~F 106 (357)
-+.++.+||-+|+|. |..+..+++....+|+++|.+++-++.+++. +. . ...|..+.++...+....+.+
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l----Ga--~---~~~d~~~~~~~~~~~~~~~~~ 231 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKEL----GA--D---LVVNPLKEDAAKFMKEKVGGV 231 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT----TC--S---EEECTTTSCHHHHHHHHHSSE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHC----CC--C---EEecCCCccHHHHHHHHhCCC
Confidence 356789999999963 5555666665445999999999988877542 11 1 123444333332222111579
Q ss_pred cEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 107 DlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
|+|+...+. . ..++.+.++|++||+++..
T Consensus 232 d~vid~~g~------~----~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 232 HAAVVTAVS------K----PAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp EEEEESSCC------H----HHHHHHHHHEEEEEEEEEC
T ss_pred CEEEECCCC------H----HHHHHHHHHhhcCCEEEEe
Confidence 999765421 1 2466777899999998865
No 325
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=92.14 E-value=0.32 Score=45.63 Aligned_cols=97 Identities=16% Similarity=0.089 Sum_probs=60.7
Q ss_pred CCCCCEEEEECCCC--ChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh--cCC
Q 018352 29 SHPYVTVCDLYCGA--GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KAN 104 (357)
Q Consensus 29 ~~~~~~VLDlGCG~--G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~--~~~ 104 (357)
+.++.+||-+|||. |..+..+++....+|+++|.+++.++.+++.-. . .. .|....++...+.. ...
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga------~-~~--~~~~~~~~~~~~~~~~~~~ 212 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGA------A-YV--IDTSTAPLYETVMELTNGI 212 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTC------S-EE--EETTTSCHHHHHHHHTTTS
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCC------c-EE--EeCCcccHHHHHHHHhCCC
Confidence 35789999999984 555556666544599999999998888866311 1 11 23333333322221 134
Q ss_pred cccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 105 ~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
.+|+|+...+-.. . ....++|++||+++..
T Consensus 213 g~Dvvid~~g~~~-------~----~~~~~~l~~~G~iv~~ 242 (340)
T 3gms_A 213 GADAAIDSIGGPD-------G----NELAFSLRPNGHFLTI 242 (340)
T ss_dssp CEEEEEESSCHHH-------H----HHHHHTEEEEEEEEEC
T ss_pred CCcEEEECCCChh-------H----HHHHHHhcCCCEEEEE
Confidence 7999986543221 1 2334799999999876
No 326
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=91.97 E-value=0.17 Score=50.69 Aligned_cols=82 Identities=11% Similarity=0.065 Sum_probs=54.8
Q ss_pred CCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchh-----------hhhh
Q 018352 32 YVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFE-----------TQMQ 100 (357)
Q Consensus 32 ~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~-----------~~l~ 100 (357)
..+|+||.||.||...-+..+++..+.++|+++.+++.-+.++... ....++.+|+...... ..+.
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~~~~---p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i~ 164 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYCD---PATHHFNEDIRDITLSHQEGVSDEAAAEHIR 164 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHSCCC---TTTCEEESCTHHHHCTTCTTSCHHHHHHHHH
T ss_pred cceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhcccC---CCcceeccchhhhhhccccccchhhHHhhhh
Confidence 3689999999999999888888877999999998877666554211 1234567887543210 0011
Q ss_pred hcCCcccEEEEccchh
Q 018352 101 EKANQADLVCCFQHLQ 116 (357)
Q Consensus 101 ~~~~~FDlV~~~~~lh 116 (357)
.....+|+++..+-.+
T Consensus 165 ~~~~~~Dvl~gGpPCQ 180 (482)
T 3me5_A 165 QHIPEHDVLLAGFPCQ 180 (482)
T ss_dssp HHSCCCSEEEEECCCC
T ss_pred hcCCCCCEEEecCCCc
Confidence 1224689998765444
No 327
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=91.93 E-value=0.85 Score=43.06 Aligned_cols=101 Identities=14% Similarity=0.050 Sum_probs=63.4
Q ss_pred CCCCCEEEEECCCC-ChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCC-CCchhhhhhh--cC
Q 018352 29 SHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPC-AENFETQMQE--KA 103 (357)
Q Consensus 29 ~~~~~~VLDlGCG~-G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~-~~~~~~~l~~--~~ 103 (357)
+.++.+||=+|+|. |..+..+++. +...|+++|.+++-++.+++. ... -+. ...|.. ..++...+.. ..
T Consensus 177 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~----~~~-~~~~~~~~~~~~~~v~~~t~g 250 (363)
T 3m6i_A 177 VRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPE----VVT-HKVERLSAEESAKKIVESFGG 250 (363)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTT----CEE-EECCSCCHHHHHHHHHHHTSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chh----ccc-ccccccchHHHHHHHHHHhCC
Confidence 56789999999864 5566666666 444599999999999988876 221 111 222211 1122222211 23
Q ss_pred CcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 104 ~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
..+|+|+...+ .. ..+..+.++|++||+++..
T Consensus 251 ~g~Dvvid~~g------~~----~~~~~~~~~l~~~G~iv~~ 282 (363)
T 3m6i_A 251 IEPAVALECTG------VE----SSIAAAIWAVKFGGKVFVI 282 (363)
T ss_dssp CCCSEEEECSC------CH----HHHHHHHHHSCTTCEEEEC
T ss_pred CCCCEEEECCC------Ch----HHHHHHHHHhcCCCEEEEE
Confidence 57999986442 11 2466777899999999876
No 328
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=91.78 E-value=0.7 Score=43.35 Aligned_cols=97 Identities=14% Similarity=0.102 Sum_probs=62.5
Q ss_pred CCCCCEEEEECC--CCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh--cCC
Q 018352 29 SHPYVTVCDLYC--GAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KAN 104 (357)
Q Consensus 29 ~~~~~~VLDlGC--G~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~--~~~ 104 (357)
+.++.+||-.|+ |.|..+..+++....+++++|.+++.++.+++. . . . .. .|.....+...+.. ...
T Consensus 164 ~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~-g-a----~-~~--~d~~~~~~~~~~~~~~~~~ 234 (343)
T 2eih_A 164 VRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKAL-G-A----D-ET--VNYTHPDWPKEVRRLTGGK 234 (343)
T ss_dssp CCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH-T-C----S-EE--EETTSTTHHHHHHHHTTTT
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc-C-C----C-EE--EcCCcccHHHHHHHHhCCC
Confidence 357899999998 456566666666555999999999988887642 1 1 1 11 24433333222221 124
Q ss_pred cccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 105 ~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
.+|+|+...+ .. .++.+.++|+++|+++..
T Consensus 235 ~~d~vi~~~g-~~----------~~~~~~~~l~~~G~~v~~ 264 (343)
T 2eih_A 235 GADKVVDHTG-AL----------YFEGVIKATANGGRIAIA 264 (343)
T ss_dssp CEEEEEESSC-SS----------SHHHHHHHEEEEEEEEES
T ss_pred CceEEEECCC-HH----------HHHHHHHhhccCCEEEEE
Confidence 7999987654 11 256677899999998865
No 329
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=91.75 E-value=0.56 Score=44.07 Aligned_cols=117 Identities=13% Similarity=0.184 Sum_probs=63.4
Q ss_pred CCCEEEEECCCCChhHH-HHH---Hh-cCC--eEEEEeCC--------hHHHHHHHHHh-Hh----cCCCceeEEEEcCC
Q 018352 31 PYVTVCDLYCGAGVDVD-KWE---TA-LIA--NYIGIDVA--------TSGIGEARDTW-EN----QRKNFIAEFFEADP 90 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~-k~~---~~-~~~--~v~GiDiS--------~~~l~~A~~r~-~~----~~~~~~v~f~~~D~ 90 (357)
+..+|||+|=|+|-.+. .|. +. +.. +++.+|-. ++.++...+.+ .. ........+..+|+
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa 175 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDA 175 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCH
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechH
Confidence 44689999999996442 221 22 222 56777742 11122211211 11 11123556777876
Q ss_pred CCCchhhhhhhcCCcccEEEEccchhhccCCHHH----HHHHHHHHHhcccCCcEEEEEeCCchHHHHHHH
Q 018352 91 CAENFETQMQEKANQADLVCCFQHLQMCFETEER----ARRLLQNVSSLLKPGGYFLGITPDSSTIWAKYQ 157 (357)
Q Consensus 91 ~~~~~~~~l~~~~~~FDlV~~~~~lh~~fes~~~----~~~~L~~i~~~LkpGG~fi~t~pd~~~i~~~~~ 157 (357)
... + ..+ ...+||+|..-. |....+ -..+++.++++++|||+|. |...+..+.+.++
T Consensus 176 ~~~-l-~~l--~~~~~Da~flDg-----FsP~kNPeLWs~e~f~~l~~~~~pgg~la-TYtaag~VRR~L~ 236 (308)
T 3vyw_A 176 RKR-I-KEV--ENFKADAVFHDA-----FSPYKNPELWTLDFLSLIKERIDEKGYWV-SYSSSLSVRKSLL 236 (308)
T ss_dssp HHH-G-GGC--CSCCEEEEEECC-----SCTTTSGGGGSHHHHHHHHTTEEEEEEEE-ESCCCHHHHHHHH
T ss_pred HHH-H-hhh--cccceeEEEeCC-----CCcccCcccCCHHHHHHHHHHhCCCcEEE-EEeCcHHHHHHHH
Confidence 431 1 111 235799997532 322222 2468999999999999876 4444555555454
No 330
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=91.74 E-value=0.46 Score=44.95 Aligned_cols=100 Identities=11% Similarity=0.051 Sum_probs=60.7
Q ss_pred CCCCCEEEEECCCC-ChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCC-CCchhhhhhh-cCC
Q 018352 29 SHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPC-AENFETQMQE-KAN 104 (357)
Q Consensus 29 ~~~~~~VLDlGCG~-G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~-~~~~~~~l~~-~~~ 104 (357)
+.++.+||-+|||. |..+..+++. +..+|+++|.+++-++.+++.-. . ..+..+.. ...+...+.. ...
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa------~-~vi~~~~~~~~~~~~~i~~~~~~ 241 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGA------D-LVLQISKESPQEIARKVEGQLGC 241 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC------S-EEEECSSCCHHHHHHHHHHHHTS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCC------C-EEEcCcccccchHHHHHHHHhCC
Confidence 45789999999875 5556666665 44489999999998887764311 1 12221100 0112111211 125
Q ss_pred cccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 105 ~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
.+|+|+..-+ .. ..+....++|++||+++..
T Consensus 242 g~D~vid~~g------~~----~~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 242 KPEVTIECTG------AE----ASIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp CCSEEEECSC------CH----HHHHHHHHHSCTTCEEEEC
T ss_pred CCCEEEECCC------Ch----HHHHHHHHHhcCCCEEEEE
Confidence 7999976442 11 2356677899999999865
No 331
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=91.69 E-value=0.78 Score=43.20 Aligned_cols=98 Identities=12% Similarity=0.027 Sum_probs=60.8
Q ss_pred CCCCCEEEEECCCC-ChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCC-Cchhhhhhh--c--
Q 018352 29 SHPYVTVCDLYCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCA-ENFETQMQE--K-- 102 (357)
Q Consensus 29 ~~~~~~VLDlGCG~-G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~-~~~~~~l~~--~-- 102 (357)
+.++.+||-+|+|. |..+..+++....+|+++|.+++.++.+++.- . . ..+ |..+ .++...+.. .
T Consensus 166 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lG----a--~-~~~--~~~~~~~~~~~i~~~~~~~ 236 (352)
T 1e3j_A 166 VQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCG----A--D-VTL--VVDPAKEEESSIIERIRSA 236 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----C--S-EEE--ECCTTTSCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhC----C--C-EEE--cCcccccHHHHHHHHhccc
Confidence 45789999999874 55566666654457999999999888876421 1 1 122 2221 222222211 1
Q ss_pred -CCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 103 -ANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 103 -~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
...+|+|+....- . ..++...++|++||+++..
T Consensus 237 ~g~g~D~vid~~g~------~----~~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 237 IGDLPNVTIDCSGN------E----KCITIGINITRTGGTLMLV 270 (352)
T ss_dssp SSSCCSEEEECSCC------H----HHHHHHHHHSCTTCEEEEC
T ss_pred cCCCCCEEEECCCC------H----HHHHHHHHHHhcCCEEEEE
Confidence 2569999764421 1 2356677899999999866
No 332
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=91.39 E-value=0.8 Score=43.62 Aligned_cols=98 Identities=16% Similarity=0.089 Sum_probs=63.1
Q ss_pred CCCCCEEEEECCCC-ChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh----c
Q 018352 29 SHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE----K 102 (357)
Q Consensus 29 ~~~~~~VLDlGCG~-G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~----~ 102 (357)
+.++.+||=+|+|. |..+..+++. +..+|+++|.+++.++.+++.-.. ...|....++...+.. .
T Consensus 180 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~---------~vi~~~~~~~~~~i~~~~~~~ 250 (370)
T 4ej6_A 180 IKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGAT---------ATVDPSAGDVVEAIAGPVGLV 250 (370)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCS---------EEECTTSSCHHHHHHSTTSSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCC---------EEECCCCcCHHHHHHhhhhcc
Confidence 56889999999864 5555666665 445899999999988887664211 1123333333222221 1
Q ss_pred CCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 103 ANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 103 ~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
.+.+|+|+...+ .. ..+..+.++|++||+++..
T Consensus 251 ~gg~Dvvid~~G------~~----~~~~~~~~~l~~~G~vv~~ 283 (370)
T 4ej6_A 251 PGGVDVVIECAG------VA----ETVKQSTRLAKAGGTVVIL 283 (370)
T ss_dssp TTCEEEEEECSC------CH----HHHHHHHHHEEEEEEEEEC
T ss_pred CCCCCEEEECCC------CH----HHHHHHHHHhccCCEEEEE
Confidence 347999976432 11 2467777899999999876
No 333
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=91.32 E-value=0.56 Score=45.63 Aligned_cols=62 Identities=5% Similarity=-0.066 Sum_probs=47.0
Q ss_pred CCCCEEEEECCCCChhHHHHH-Hh-c-CCeEEEEeCChHHHHHHHHHhHh--cCCC-ceeEEEEcCCC
Q 018352 30 HPYVTVCDLYCGAGVDVDKWE-TA-L-IANYIGIDVATSGIGEARDTWEN--QRKN-FIAEFFEADPC 91 (357)
Q Consensus 30 ~~~~~VLDlGCG~G~~l~k~~-~~-~-~~~v~GiDiS~~~l~~A~~r~~~--~~~~-~~v~f~~~D~~ 91 (357)
+++..|+|+||+.|..+..++ +. + .++|+++++++...+..++..+. ++.. .++.++.+-+.
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al~ 292 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAG 292 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEEC
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEEE
Confidence 477899999999998877766 33 2 37999999999999999988876 2222 46776665543
No 334
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=91.32 E-value=1.4 Score=35.32 Aligned_cols=101 Identities=16% Similarity=0.076 Sum_probs=60.6
Q ss_pred CCEEEEECCCC-ChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEEE
Q 018352 32 YVTVCDLYCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (357)
Q Consensus 32 ~~~VLDlGCG~-G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~ 110 (357)
..+|+=+|||. |..+.+.+.....+|+++|.+++.++.+++. .+.++.+|..+....... ....+|+|+
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~--------~~~~~~gd~~~~~~l~~~--~~~~~d~vi 75 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE--------GFDAVIADPTDESFYRSL--DLEGVSAVL 75 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT--------TCEEEECCTTCHHHHHHS--CCTTCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC--------CCcEEECCCCCHHHHHhC--CcccCCEEE
Confidence 35789999985 4444444444445899999999887766532 356788998775442221 135689887
Q ss_pred EccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCch
Q 018352 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (357)
Q Consensus 111 ~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~ 150 (357)
+... +.+ ....+....+.+. ...++....+..
T Consensus 76 ~~~~------~~~-~n~~~~~~a~~~~-~~~iia~~~~~~ 107 (141)
T 3llv_A 76 ITGS------DDE-FNLKILKALRSVS-DVYAIVRVSSPK 107 (141)
T ss_dssp ECCS------CHH-HHHHHHHHHHHHC-CCCEEEEESCGG
T ss_pred EecC------CHH-HHHHHHHHHHHhC-CceEEEEEcChh
Confidence 6442 222 2233333444455 566776665554
No 335
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=91.31 E-value=0.56 Score=44.51 Aligned_cols=97 Identities=13% Similarity=-0.051 Sum_probs=61.9
Q ss_pred CCCCCEEEEECCCC-ChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh--cCCc
Q 018352 29 SHPYVTVCDLYCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KANQ 105 (357)
Q Consensus 29 ~~~~~~VLDlGCG~-G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~--~~~~ 105 (357)
+.++.+||-+|||. |..+..+++....+++++|.+++-++.+++.-. . ..+ |-...++...+.. ....
T Consensus 187 ~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa------~-~vi--~~~~~~~~~~v~~~~~g~g 257 (363)
T 3uog_A 187 LRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGA------D-HGI--NRLEEDWVERVYALTGDRG 257 (363)
T ss_dssp CCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTC------S-EEE--ETTTSCHHHHHHHHHTTCC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCC------C-EEE--cCCcccHHHHHHHHhCCCC
Confidence 35789999999875 555666666655599999999998888765421 1 122 2111233222211 2347
Q ss_pred ccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 106 FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
+|+|+...+- ..+..+.++|++||.++..
T Consensus 258 ~D~vid~~g~-----------~~~~~~~~~l~~~G~iv~~ 286 (363)
T 3uog_A 258 ADHILEIAGG-----------AGLGQSLKAVAPDGRISVI 286 (363)
T ss_dssp EEEEEEETTS-----------SCHHHHHHHEEEEEEEEEE
T ss_pred ceEEEECCCh-----------HHHHHHHHHhhcCCEEEEE
Confidence 9999865431 1256677899999999876
No 336
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=91.20 E-value=0.48 Score=44.69 Aligned_cols=98 Identities=12% Similarity=0.059 Sum_probs=62.0
Q ss_pred CCCCCEEEEECCCC-ChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh--cCC
Q 018352 29 SHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KAN 104 (357)
Q Consensus 29 ~~~~~~VLDlGCG~-G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~--~~~ 104 (357)
+.++.+||=+|+|. |..+..+++. +..+|+++|.+++-++.+++.-.. .+ .|....++...+.. ...
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~-------~v--i~~~~~~~~~~v~~~t~g~ 234 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGAT-------DI--INYKNGDIVEQILKATDGK 234 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCC-------EE--ECGGGSCHHHHHHHHTTTC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCc-------eE--EcCCCcCHHHHHHHHcCCC
Confidence 45789999999875 5555666665 444899999999988887664211 11 22222233222221 234
Q ss_pred cccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 105 ~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
.+|+|+...+-. ..+..+.++|++||+++..
T Consensus 235 g~D~v~d~~g~~----------~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 235 GVDKVVIAGGDV----------HTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp CEEEEEECSSCT----------THHHHHHHHEEEEEEEEEC
T ss_pred CCCEEEECCCCh----------HHHHHHHHHHhcCCEEEEe
Confidence 699998644211 2466777899999999866
No 337
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=90.98 E-value=0.58 Score=44.61 Aligned_cols=95 Identities=16% Similarity=0.069 Sum_probs=60.5
Q ss_pred CCCCCEEEEECCCC-ChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCccc
Q 018352 29 SHPYVTVCDLYCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (357)
Q Consensus 29 ~~~~~~VLDlGCG~-G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FD 107 (357)
+.++.+||-+|+|. |..+..+++....+|+++|.+++.++.+++.- . . .++ |....+....+ .+.+|
T Consensus 192 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lG-a-----~-~vi--~~~~~~~~~~~---~~g~D 259 (369)
T 1uuf_A 192 AGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALG-A-----D-EVV--NSRNADEMAAH---LKSFD 259 (369)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHT-C-----S-EEE--ETTCHHHHHTT---TTCEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC-C-----c-EEe--ccccHHHHHHh---hcCCC
Confidence 46789999999874 55566666665557999999999888886531 1 1 112 22221111111 25799
Q ss_pred EEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 108 LVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 108 lV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
+|+...+-.. .++.+.++|++||+++..
T Consensus 260 vvid~~g~~~----------~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 260 FILNTVAAPH----------NLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp EEEECCSSCC----------CHHHHHTTEEEEEEEEEC
T ss_pred EEEECCCCHH----------HHHHHHHHhccCCEEEEe
Confidence 9986543211 255667899999998865
No 338
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=90.75 E-value=1.7 Score=41.78 Aligned_cols=103 Identities=14% Similarity=-0.012 Sum_probs=61.8
Q ss_pred CCCCCEEEEECCCC-ChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh--cCC
Q 018352 29 SHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KAN 104 (357)
Q Consensus 29 ~~~~~~VLDlGCG~-G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~--~~~ 104 (357)
+.++.+||=+|+|. |..+..+++. +..+|+++|.+++-++.+++.-. . . ..|....++...+.. ...
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa------~-~--vi~~~~~~~~~~i~~~t~g~ 281 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGA------D-H--VIDPTKENFVEAVLDYTNGL 281 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTC------S-E--EECTTTSCHHHHHHHHTTTC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC------C-E--EEcCCCCCHHHHHHHHhCCC
Confidence 45789999999864 4455566665 44599999999999888865421 1 1 123333333332221 234
Q ss_pred cccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 105 ~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
.+|+|+-.-+-. ......+++.+.+++++||+++..
T Consensus 282 g~D~vid~~g~~-----~~~~~~~~~~l~~~~~~~G~iv~~ 317 (404)
T 3ip1_A 282 GAKLFLEATGVP-----QLVWPQIEEVIWRARGINATVAIV 317 (404)
T ss_dssp CCSEEEECSSCH-----HHHHHHHHHHHHHCSCCCCEEEEC
T ss_pred CCCEEEECCCCc-----HHHHHHHHHHHHhccCCCcEEEEe
Confidence 799998644211 012333444444666999999876
No 339
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=90.74 E-value=0.64 Score=44.60 Aligned_cols=107 Identities=15% Similarity=0.057 Sum_probs=63.5
Q ss_pred CCCCCEEEEECCCC-ChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCc-hhhhhhh--cC
Q 018352 29 SHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAEN-FETQMQE--KA 103 (357)
Q Consensus 29 ~~~~~~VLDlGCG~-G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~-~~~~l~~--~~ 103 (357)
+.++.+||-+|||. |..+..+++. +..+|+++|.+++-++.|++. -++.+ |....+ +...+.. ..
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~l--------Ga~~i--~~~~~~~~~~~v~~~t~g 252 (398)
T 1kol_A 183 VGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ--------GFEIA--DLSLDTPLHEQIAALLGE 252 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT--------TCEEE--ETTSSSCHHHHHHHHHSS
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHc--------CCcEE--ccCCcchHHHHHHHHhCC
Confidence 45789999999875 5566666665 444799999999988887542 12222 222222 2222221 12
Q ss_pred CcccEEEEccchhhccC-----CHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 104 NQADLVCCFQHLQMCFE-----TEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 104 ~~FDlV~~~~~lh~~fe-----s~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
..+|+|+..-+-..... +.......++.+.++|++||+++..
T Consensus 253 ~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 253 PEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp SCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEe
Confidence 47999986543211000 0001123577788899999998765
No 340
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=90.48 E-value=0.67 Score=43.58 Aligned_cols=98 Identities=16% Similarity=0.195 Sum_probs=61.4
Q ss_pred CCCCCEEEEECCCCC--hhHHHHHHhc-CCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh-cC-
Q 018352 29 SHPYVTVCDLYCGAG--VDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE-KA- 103 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G--~~l~k~~~~~-~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~-~~- 103 (357)
+.++.+||-.|+|.| ..+..+++.. ..+|+++|.+++.++.+++. . . . .+ .|.........+.. ..
T Consensus 168 ~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~-g-~----~-~~--~~~~~~~~~~~~~~~~~~ 238 (347)
T 1jvb_A 168 LDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA-G-A----D-YV--INASMQDPLAEIRRITES 238 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH-T-C----S-EE--EETTTSCHHHHHHHHTTT
T ss_pred CCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh-C-C----C-EE--ecCCCccHHHHHHHHhcC
Confidence 457899999999844 4455555554 56899999999988887543 1 1 1 11 23333332211111 12
Q ss_pred CcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 104 ~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
+.+|+|+...+- ...++.+.++|++||+++..
T Consensus 239 ~~~d~vi~~~g~----------~~~~~~~~~~l~~~G~iv~~ 270 (347)
T 1jvb_A 239 KGVDAVIDLNNS----------EKTLSVYPKALAKQGKYVMV 270 (347)
T ss_dssp SCEEEEEESCCC----------HHHHTTGGGGEEEEEEEEEC
T ss_pred CCceEEEECCCC----------HHHHHHHHHHHhcCCEEEEE
Confidence 479999765421 12467778899999998865
No 341
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=90.45 E-value=1.2 Score=41.47 Aligned_cols=97 Identities=21% Similarity=0.169 Sum_probs=61.6
Q ss_pred CCCCCEEEEECC--CCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh--cCC
Q 018352 29 SHPYVTVCDLYC--GAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KAN 104 (357)
Q Consensus 29 ~~~~~~VLDlGC--G~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~--~~~ 104 (357)
+.++.+||-.|+ |.|..+..+++....+++++|.+++.++.+++. . . . ...|.........+.. ...
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~-g-~----~---~~~d~~~~~~~~~i~~~~~~~ 213 (333)
T 1wly_A 143 VKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKL-G-C----H---HTINYSTQDFAEVVREITGGK 213 (333)
T ss_dssp CCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH-T-C----S---EEEETTTSCHHHHHHHHHTTC
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-C-C----C---EEEECCCHHHHHHHHHHhCCC
Confidence 357889999996 445556666665455999999999888877552 1 1 1 1124433333222211 134
Q ss_pred cccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 105 ~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
.+|+|+...+- ..++.+.++|++||+++..
T Consensus 214 ~~d~vi~~~g~-----------~~~~~~~~~l~~~G~iv~~ 243 (333)
T 1wly_A 214 GVDVVYDSIGK-----------DTLQKSLDCLRPRGMCAAY 243 (333)
T ss_dssp CEEEEEECSCT-----------TTHHHHHHTEEEEEEEEEC
T ss_pred CCeEEEECCcH-----------HHHHHHHHhhccCCEEEEE
Confidence 69999865532 2356777899999998866
No 342
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=90.34 E-value=1.3 Score=43.24 Aligned_cols=104 Identities=13% Similarity=0.036 Sum_probs=69.9
Q ss_pred CCEEEEECCCC-ChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEEE
Q 018352 32 YVTVCDLYCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (357)
Q Consensus 32 ~~~VLDlGCG~-G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~ 110 (357)
..+|+=+|||. |..+...+......|+++|.+++.++.+++. .+.++.+|++........ .-...|+|+
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~--------g~~vi~GDat~~~~L~~a--gi~~A~~vi 73 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKF--------GMKVFYGDATRMDLLESA--GAAKAEVLI 73 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHT--------TCCCEESCTTCHHHHHHT--TTTTCSEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhC--------CCeEEEcCCCCHHHHHhc--CCCccCEEE
Confidence 45789999986 5455555555555899999999998877532 345689999886543222 235789887
Q ss_pred EccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCchHH
Q 018352 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTI 152 (357)
Q Consensus 111 ~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~i 152 (357)
+.. .+. .....+-...+.+.|...++...-+....
T Consensus 74 v~~------~~~-~~n~~i~~~ar~~~p~~~Iiara~~~~~~ 108 (413)
T 3l9w_A 74 NAI------DDP-QTNLQLTEMVKEHFPHLQIIARARDVDHY 108 (413)
T ss_dssp ECC------SSH-HHHHHHHHHHHHHCTTCEEEEEESSHHHH
T ss_pred ECC------CCh-HHHHHHHHHHHHhCCCCeEEEEECCHHHH
Confidence 643 222 33445556667788888888887776543
No 343
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=90.31 E-value=0.84 Score=43.08 Aligned_cols=97 Identities=10% Similarity=-0.088 Sum_probs=60.2
Q ss_pred CCCCCEEEEECCC--CChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh--cCC
Q 018352 29 SHPYVTVCDLYCG--AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KAN 104 (357)
Q Consensus 29 ~~~~~~VLDlGCG--~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~--~~~ 104 (357)
+.++.+||-.|++ .|..+..+++....+++++|.+++.++.+++. . . . ...|.....+...+.. ...
T Consensus 160 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~-g-~----~---~~~~~~~~~~~~~~~~~~~~~ 230 (354)
T 2j8z_A 160 VQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKL-G-A----A---AGFNYKKEDFSEATLKFTKGA 230 (354)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-T-C----S---EEEETTTSCHHHHHHHHTTTS
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc-C-C----c---EEEecCChHHHHHHHHHhcCC
Confidence 3478899999853 45555566665555999999999988887433 1 1 1 1223333333222221 124
Q ss_pred cccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 105 ~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
.+|+|+...+-. .+....++|++||+++..
T Consensus 231 ~~d~vi~~~G~~-----------~~~~~~~~l~~~G~iv~~ 260 (354)
T 2j8z_A 231 GVNLILDCIGGS-----------YWEKNVNCLALDGRWVLY 260 (354)
T ss_dssp CEEEEEESSCGG-----------GHHHHHHHEEEEEEEEEC
T ss_pred CceEEEECCCch-----------HHHHHHHhccCCCEEEEE
Confidence 699998655321 255667899999998866
No 344
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=90.27 E-value=1 Score=42.33 Aligned_cols=96 Identities=16% Similarity=0.041 Sum_probs=60.7
Q ss_pred CCCEEEEECCCC-ChhHHHHHHhcCC-eEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh--cCCcc
Q 018352 31 PYVTVCDLYCGA-GVDVDKWETALIA-NYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KANQA 106 (357)
Q Consensus 31 ~~~~VLDlGCG~-G~~l~k~~~~~~~-~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~--~~~~F 106 (357)
++.+||-+|+|. |..+..+++.... +|+++|.+++.++.+++.-. . . ..|....++...+.. ....+
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga------~-~--~~~~~~~~~~~~v~~~~~g~g~ 237 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGA------D-Y--VINPFEEDVVKEVMDITDGNGV 237 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTC------S-E--EECTTTSCHHHHHHHHTTTSCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCC------C-E--EECCCCcCHHHHHHHHcCCCCC
Confidence 788999999963 4455666665444 89999999998887764311 1 1 123333333332221 12469
Q ss_pred cEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 107 DlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
|+|+..-+- ...++.+.++|++||+++..
T Consensus 238 D~vid~~g~----------~~~~~~~~~~l~~~G~iv~~ 266 (348)
T 2d8a_A 238 DVFLEFSGA----------PKALEQGLQAVTPAGRVSLL 266 (348)
T ss_dssp EEEEECSCC----------HHHHHHHHHHEEEEEEEEEC
T ss_pred CEEEECCCC----------HHHHHHHHHHHhcCCEEEEE
Confidence 999765421 12466777899999998865
No 345
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=90.16 E-value=1.6 Score=36.82 Aligned_cols=103 Identities=14% Similarity=0.074 Sum_probs=60.4
Q ss_pred CCEEEEECCCC-ChhHHHHHHhc-CCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEE
Q 018352 32 YVTVCDLYCGA-GVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 32 ~~~VLDlGCG~-G~~l~k~~~~~-~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
+.+|+=+|||. |..+.+.+... ...|+++|.+++.++.+++ . .+.++.+|..+........ .-..+|+|
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~----~----g~~~~~gd~~~~~~l~~~~-~~~~ad~v 109 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS----E----GRNVISGDATDPDFWERIL-DTGHVKLV 109 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH----T----TCCEEECCTTCHHHHHTBC-SCCCCCEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH----C----CCCEEEcCCCCHHHHHhcc-CCCCCCEE
Confidence 46899999986 44444444443 4589999999987766543 1 2456778876533211110 13568988
Q ss_pred EEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCch
Q 018352 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (357)
Q Consensus 110 ~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~ 150 (357)
++... +.+....+ -...+.+.|++.++..+.+..
T Consensus 110 i~~~~------~~~~~~~~-~~~~~~~~~~~~ii~~~~~~~ 143 (183)
T 3c85_A 110 LLAMP------HHQGNQTA-LEQLQRRNYKGQIAAIAEYPD 143 (183)
T ss_dssp EECCS------SHHHHHHH-HHHHHHTTCCSEEEEEESSHH
T ss_pred EEeCC------ChHHHHHH-HHHHHHHCCCCEEEEEECCHH
Confidence 76431 22222233 335556677788887765543
No 346
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=90.11 E-value=0.77 Score=43.14 Aligned_cols=91 Identities=16% Similarity=0.085 Sum_probs=60.4
Q ss_pred cCCCCCEEEEECCCC-ChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcc
Q 018352 28 YSHPYVTVCDLYCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (357)
Q Consensus 28 ~~~~~~~VLDlGCG~-G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~F 106 (357)
-+.++.+||-+|+|. |..+..+++....+|+++|.+++-++.+++.-. .. ++ .|. ..+ ...+
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa------~~-v~-~~~--~~~-------~~~~ 235 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGV------KH-FY-TDP--KQC-------KEEL 235 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTC------SE-EE-SSG--GGC-------CSCE
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCC------Ce-ec-CCH--HHH-------hcCC
Confidence 356889999999875 556666666655599999999998887765211 11 22 221 111 2379
Q ss_pred cEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 107 DlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
|+|+...+-. ..+..+.++|++||+++..
T Consensus 236 D~vid~~g~~----------~~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 236 DFIISTIPTH----------YDLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp EEEEECCCSC----------CCHHHHHTTEEEEEEEEEC
T ss_pred CEEEECCCcH----------HHHHHHHHHHhcCCEEEEE
Confidence 9998654322 1256677899999999876
No 347
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=90.06 E-value=0.82 Score=42.47 Aligned_cols=97 Identities=14% Similarity=0.128 Sum_probs=60.7
Q ss_pred CCCCCEEEEECCC--CChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh--cCC
Q 018352 29 SHPYVTVCDLYCG--AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KAN 104 (357)
Q Consensus 29 ~~~~~~VLDlGCG--~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~--~~~ 104 (357)
+.++.+||-.|++ .|..+..+++....+|+++|.+++.++.+++. . . . . ..|.........+.. ...
T Consensus 138 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~-g-~----~-~--~~~~~~~~~~~~~~~~~~~~ 208 (327)
T 1qor_A 138 IKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKA-G-A----W-Q--VINYREEDLVERLKEITGGK 208 (327)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH-T-C----S-E--EEETTTSCHHHHHHHHTTTC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc-C-C----C-E--EEECCCccHHHHHHHHhCCC
Confidence 3478999999943 45455555555445999999999888877652 1 1 1 1 124333333222211 124
Q ss_pred cccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 105 ~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
.+|+|+...+ . ..++.+.++|++||+++..
T Consensus 209 ~~D~vi~~~g-~----------~~~~~~~~~l~~~G~iv~~ 238 (327)
T 1qor_A 209 KVRVVYDSVG-R----------DTWERSLDCLQRRGLMVSF 238 (327)
T ss_dssp CEEEEEECSC-G----------GGHHHHHHTEEEEEEEEEC
T ss_pred CceEEEECCc-h----------HHHHHHHHHhcCCCEEEEE
Confidence 6999987654 1 2356777899999998865
No 348
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=89.84 E-value=0.83 Score=42.49 Aligned_cols=97 Identities=18% Similarity=0.146 Sum_probs=61.8
Q ss_pred CCCCCEEEEEC-CC-CChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh--cCC
Q 018352 29 SHPYVTVCDLY-CG-AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KAN 104 (357)
Q Consensus 29 ~~~~~~VLDlG-CG-~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~--~~~ 104 (357)
+.++.+||-.| +| -|..+..+++....+++++|.+++-++.+++.-. . .. .|.....+...+.. ...
T Consensus 138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga------~-~~--~~~~~~~~~~~~~~~~~~~ 208 (325)
T 3jyn_A 138 VKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGA------W-ET--IDYSHEDVAKRVLELTDGK 208 (325)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTC------S-EE--EETTTSCHHHHHHHHTTTC
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC------C-EE--EeCCCccHHHHHHHHhCCC
Confidence 35789999998 34 3555566666544599999999998888865311 1 11 23333333332221 234
Q ss_pred cccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 105 ~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
.+|+|+...+- ..+..+.++|++||+++..
T Consensus 209 g~Dvvid~~g~-----------~~~~~~~~~l~~~G~iv~~ 238 (325)
T 3jyn_A 209 KCPVVYDGVGQ-----------DTWLTSLDSVAPRGLVVSF 238 (325)
T ss_dssp CEEEEEESSCG-----------GGHHHHHTTEEEEEEEEEC
T ss_pred CceEEEECCCh-----------HHHHHHHHHhcCCCEEEEE
Confidence 79999865532 1356677899999999876
No 349
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=89.72 E-value=0.76 Score=43.31 Aligned_cols=98 Identities=11% Similarity=-0.072 Sum_probs=61.1
Q ss_pred CCCC--CEEEEECCC--CChhHHHHHHhcCC-eEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh-c
Q 018352 29 SHPY--VTVCDLYCG--AGVDVDKWETALIA-NYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE-K 102 (357)
Q Consensus 29 ~~~~--~~VLDlGCG--~G~~l~k~~~~~~~-~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~-~ 102 (357)
+.++ .+||-.|++ -|..+..+++.... +|+++|.+++.++.+++.+.. . ...|.....+...+.. .
T Consensus 156 ~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~-----~---~~~d~~~~~~~~~~~~~~ 227 (357)
T 2zb4_A 156 ITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGF-----D---AAINYKKDNVAEQLRESC 227 (357)
T ss_dssp CCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCC-----S---EEEETTTSCHHHHHHHHC
T ss_pred CCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCC-----c---eEEecCchHHHHHHHHhc
Confidence 4578 899999984 34455555555444 999999998877776543211 1 1234433333322221 1
Q ss_pred CCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 103 ANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 103 ~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
.+.+|+|+...+- ..+..+.++|++||+++..
T Consensus 228 ~~~~d~vi~~~G~-----------~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 228 PAGVDVYFDNVGG-----------NISDTVISQMNENSHIILC 259 (357)
T ss_dssp TTCEEEEEESCCH-----------HHHHHHHHTEEEEEEEEEC
T ss_pred CCCCCEEEECCCH-----------HHHHHHHHHhccCcEEEEE
Confidence 2369999865531 3467778899999998865
No 350
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=89.40 E-value=0.78 Score=43.08 Aligned_cols=98 Identities=11% Similarity=-0.021 Sum_probs=61.8
Q ss_pred CCCCCEEEEECCC--CChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCC-CCchhhhhhh-cCC
Q 018352 29 SHPYVTVCDLYCG--AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPC-AENFETQMQE-KAN 104 (357)
Q Consensus 29 ~~~~~~VLDlGCG--~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~-~~~~~~~l~~-~~~ 104 (357)
+.++.+||-+|++ .|..+..+++....+|+++|.+++.++.+++. +. . ...|.. ...+...+.. ..+
T Consensus 167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~----g~--~---~~~d~~~~~~~~~~~~~~~~~ 237 (347)
T 2hcy_A 167 LMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSI----GG--E---VFIDFTKEKDIVGAVLKATDG 237 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHT----TC--C---EEEETTTCSCHHHHHHHHHTS
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHc----CC--c---eEEecCccHhHHHHHHHHhCC
Confidence 4578999999983 45555666665445999999998888766542 11 1 112443 2233222211 123
Q ss_pred cccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 105 ~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
.+|+|+...+. ...++.+.+.|++||+++..
T Consensus 238 ~~D~vi~~~g~----------~~~~~~~~~~l~~~G~iv~~ 268 (347)
T 2hcy_A 238 GAHGVINVSVS----------EAAIEASTRYVRANGTTVLV 268 (347)
T ss_dssp CEEEEEECSSC----------HHHHHHHTTSEEEEEEEEEC
T ss_pred CCCEEEECCCc----------HHHHHHHHHHHhcCCEEEEE
Confidence 79999865531 13577888999999998865
No 351
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=89.37 E-value=1.3 Score=42.01 Aligned_cols=97 Identities=12% Similarity=-0.012 Sum_probs=61.6
Q ss_pred CCCCCEEEEEC-CC-CChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh-cCCc
Q 018352 29 SHPYVTVCDLY-CG-AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE-KANQ 105 (357)
Q Consensus 29 ~~~~~~VLDlG-CG-~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~-~~~~ 105 (357)
+.++.+||-+| +| .|..+..+++....+|+++|.+++.++.+++. +. . ..+ |.....+...+.. ....
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~----Ga--~-~~~--~~~~~~~~~~~~~~~~~g 231 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSL----GC--D-RPI--NYKTEPVGTVLKQEYPEG 231 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----TC--S-EEE--ETTTSCHHHHHHHHCTTC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHc----CC--c-EEE--ecCChhHHHHHHHhcCCC
Confidence 45789999999 34 46566666666555899999999888877652 11 1 112 2222333222221 1346
Q ss_pred ccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 106 FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
+|+|+...+- ..++.+.++|++||+++..
T Consensus 232 ~D~vid~~g~-----------~~~~~~~~~l~~~G~iv~~ 260 (362)
T 2c0c_A 232 VDVVYESVGG-----------AMFDLAVDALATKGRLIVI 260 (362)
T ss_dssp EEEEEECSCT-----------HHHHHHHHHEEEEEEEEEC
T ss_pred CCEEEECCCH-----------HHHHHHHHHHhcCCEEEEE
Confidence 9999865421 2467778899999998865
No 352
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=89.25 E-value=1.1 Score=41.73 Aligned_cols=97 Identities=12% Similarity=0.041 Sum_probs=61.2
Q ss_pred CCCCCEEEEECCC--CChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh--cCC
Q 018352 29 SHPYVTVCDLYCG--AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KAN 104 (357)
Q Consensus 29 ~~~~~~VLDlGCG--~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~--~~~ 104 (357)
+.++.+||-+|++ -|..+..+++....+++++|.+++-++.+++.- . . .. .|....++...+.. ...
T Consensus 146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g-a-----~-~~--~~~~~~~~~~~~~~~~~~~ 216 (334)
T 3qwb_A 146 VKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYG-A-----E-YL--INASKEDILRQVLKFTNGK 216 (334)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT-C-----S-EE--EETTTSCHHHHHHHHTTTS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC-C-----c-EE--EeCCCchHHHHHHHHhCCC
Confidence 4578999999953 344555666665559999999999888775521 1 1 11 23333333332221 135
Q ss_pred cccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 105 ~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
.+|+|+...+- ..+..+.++|++||+++..
T Consensus 217 g~D~vid~~g~-----------~~~~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 217 GVDASFDSVGK-----------DTFEISLAALKRKGVFVSF 246 (334)
T ss_dssp CEEEEEECCGG-----------GGHHHHHHHEEEEEEEEEC
T ss_pred CceEEEECCCh-----------HHHHHHHHHhccCCEEEEE
Confidence 79999865532 1356677899999999876
No 353
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=89.20 E-value=0.68 Score=43.78 Aligned_cols=97 Identities=14% Similarity=0.077 Sum_probs=60.3
Q ss_pred CCCCCEEEEECCC--CChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh--cCC
Q 018352 29 SHPYVTVCDLYCG--AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KAN 104 (357)
Q Consensus 29 ~~~~~~VLDlGCG--~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~--~~~ 104 (357)
+.++.+||-.|++ .|..+..+++....+|+++|.+++.++.+++. +. . . ..|.....+...+.. ...
T Consensus 168 ~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----ga--~-~--~~d~~~~~~~~~~~~~~~~~ 238 (351)
T 1yb5_A 168 VKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQN----GA--H-E--VFNHREVNYIDKIKKYVGEK 238 (351)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----TC--S-E--EEETTSTTHHHHHHHHHCTT
T ss_pred CCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHc----CC--C-E--EEeCCCchHHHHHHHHcCCC
Confidence 4578999999983 34455566665555999999999888766432 11 1 1 123333333222211 134
Q ss_pred cccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 105 ~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
.+|+|+...+- ..+....++|++||+++..
T Consensus 239 ~~D~vi~~~G~-----------~~~~~~~~~l~~~G~iv~~ 268 (351)
T 1yb5_A 239 GIDIIIEMLAN-----------VNLSKDLSLLSHGGRVIVV 268 (351)
T ss_dssp CEEEEEESCHH-----------HHHHHHHHHEEEEEEEEEC
T ss_pred CcEEEEECCCh-----------HHHHHHHHhccCCCEEEEE
Confidence 79999765421 1356677899999998865
No 354
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=88.96 E-value=0.37 Score=45.64 Aligned_cols=97 Identities=15% Similarity=0.094 Sum_probs=59.7
Q ss_pred CCCCCEEEEECCCC-ChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCC-chhhhhhhcCCcc
Q 018352 29 SHPYVTVCDLYCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAE-NFETQMQEKANQA 106 (357)
Q Consensus 29 ~~~~~~VLDlGCG~-G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~-~~~~~l~~~~~~F 106 (357)
+.++.+||-+|+|. |..+..+++....+|+++|.+++-++.+++.- . . .++ |.... ++...+ .+.+
T Consensus 177 ~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lG-a-----~-~v~--~~~~~~~~~~~~---~~~~ 244 (360)
T 1piw_A 177 CGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMG-A-----D-HYI--ATLEEGDWGEKY---FDTF 244 (360)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHT-C-----S-EEE--EGGGTSCHHHHS---CSCE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcC-C-----C-EEE--cCcCchHHHHHh---hcCC
Confidence 45789999999864 44556666654448999999999888886531 1 1 112 21111 222222 1579
Q ss_pred cEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 107 DlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
|+|+....--. ...++.+.++|++||+++..
T Consensus 245 D~vid~~g~~~--------~~~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 245 DLIVVCASSLT--------DIDFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp EEEEECCSCST--------TCCTTTGGGGEEEEEEEEEC
T ss_pred CEEEECCCCCc--------HHHHHHHHHHhcCCCEEEEe
Confidence 99986553200 01245567899999998865
No 355
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=88.10 E-value=1.9 Score=40.88 Aligned_cols=98 Identities=15% Similarity=0.069 Sum_probs=60.7
Q ss_pred CCCCCEEEEECCCC-ChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCC--Cchhhhhhh-cC
Q 018352 29 SHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCA--ENFETQMQE-KA 103 (357)
Q Consensus 29 ~~~~~~VLDlGCG~-G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~--~~~~~~l~~-~~ 103 (357)
+.++.+||-+|+|. |..+..+++. +..+|+++|.+++-++.+++.-. . .++ |..+ .++...+.. ..
T Consensus 189 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa------~-~vi--~~~~~~~~~~~~i~~~t~ 259 (373)
T 1p0f_A 189 VTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGA------T-ECL--NPKDYDKPIYEVICEKTN 259 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTC------S-EEE--CGGGCSSCHHHHHHHHTT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCC------c-EEE--ecccccchHHHHHHHHhC
Confidence 45789999999874 4455566665 44589999999998888764211 1 112 2211 223222211 12
Q ss_pred CcccEEEEccchhhccCCHHHHHHHHHHHHhcccCC-cEEEEE
Q 018352 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPG-GYFLGI 145 (357)
Q Consensus 104 ~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpG-G~fi~t 145 (357)
+.+|+|+..-+- ...+..+.++|++| |+++..
T Consensus 260 gg~Dvvid~~g~----------~~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 260 GGVDYAVECAGR----------IETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp SCBSEEEECSCC----------HHHHHHHHHTBCTTTCEEEEC
T ss_pred CCCCEEEECCCC----------HHHHHHHHHHHhcCCCEEEEE
Confidence 479999764421 12467778899999 998865
No 356
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=88.10 E-value=1.1 Score=42.88 Aligned_cols=100 Identities=20% Similarity=0.117 Sum_probs=60.2
Q ss_pred CCCCCEEEEECCCC-ChhHHHHHHhcC-CeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCC-CCchhhhhhh--cC
Q 018352 29 SHPYVTVCDLYCGA-GVDVDKWETALI-ANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPC-AENFETQMQE--KA 103 (357)
Q Consensus 29 ~~~~~~VLDlGCG~-G~~l~k~~~~~~-~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~-~~~~~~~l~~--~~ 103 (357)
+.++.+||-+|+|. |..+..+++... .+|+++|.+++-++.+++. .. . .++..+.. ..++...+.. ..
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l-Ga-----~-~vi~~~~~~~~~~~~~v~~~~~g 265 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEI-GA-----D-LTLNRRETSVEERRKAIMDITHG 265 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHT-TC-----S-EEEETTTSCHHHHHHHHHHHTTT
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHc-CC-----c-EEEeccccCcchHHHHHHHHhCC
Confidence 45789999999764 445566666544 5999999999988887642 11 1 12221100 1122222211 12
Q ss_pred CcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 104 ~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
..+|+|+..-+-. ..+..+.++|++||+++..
T Consensus 266 ~g~Dvvid~~g~~----------~~~~~~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 266 RGADFILEATGDS----------RALLEGSELLRRGGFYSVA 297 (380)
T ss_dssp SCEEEEEECSSCT----------THHHHHHHHEEEEEEEEEC
T ss_pred CCCcEEEECCCCH----------HHHHHHHHHHhcCCEEEEE
Confidence 3699998654211 2356677899999998865
No 357
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=88.07 E-value=0.63 Score=43.68 Aligned_cols=95 Identities=16% Similarity=0.077 Sum_probs=58.9
Q ss_pred CCCEEEEECCCC-ChhHHHHHHhcCC-eEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh-cCCccc
Q 018352 31 PYVTVCDLYCGA-GVDVDKWETALIA-NYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE-KANQAD 107 (357)
Q Consensus 31 ~~~~VLDlGCG~-G~~l~k~~~~~~~-~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~-~~~~FD 107 (357)
++.+||-+|+|. |..+..+++.... +|+++|.+++-++.+++. .. . ..|....++...+.. ....+|
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l--a~------~--v~~~~~~~~~~~~~~~~~~g~D 233 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY--AD------R--LVNPLEEDLLEVVRRVTGSGVE 233 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT--CS------E--EECTTTSCHHHHHHHHHSSCEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh--HH------h--ccCcCccCHHHHHHHhcCCCCC
Confidence 788999999853 4455566665444 899999998877665432 11 1 123333333322211 134699
Q ss_pred EEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 108 LVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 108 lV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
+|+...+- ...++.+.++|++||+++..
T Consensus 234 ~vid~~g~----------~~~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 234 VLLEFSGN----------EAAIHQGLMALIPGGEARIL 261 (343)
T ss_dssp EEEECSCC----------HHHHHHHHHHEEEEEEEEEC
T ss_pred EEEECCCC----------HHHHHHHHHHHhcCCEEEEE
Confidence 99765421 12366777899999998865
No 358
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=88.05 E-value=0.64 Score=43.65 Aligned_cols=95 Identities=16% Similarity=0.047 Sum_probs=59.5
Q ss_pred CCCEEEEECCCC-ChhHHHHHHhc--CCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCC-CchhhhhhhcCCcc
Q 018352 31 PYVTVCDLYCGA-GVDVDKWETAL--IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCA-ENFETQMQEKANQA 106 (357)
Q Consensus 31 ~~~~VLDlGCG~-G~~l~k~~~~~--~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~-~~~~~~l~~~~~~F 106 (357)
++.+||-+|+|. |..+..+++.. ..+|+++|.|++-++.+++.-.. .++ |... .+....+. ....+
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~-------~vi--~~~~~~~~~~~~~-~g~g~ 239 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGAD-------YVS--EMKDAESLINKLT-DGLGA 239 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCS-------EEE--CHHHHHHHHHHHH-TTCCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCC-------EEe--ccccchHHHHHhh-cCCCc
Confidence 789999999964 44556666654 56899999999988888653211 111 1111 11111121 12379
Q ss_pred cEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 107 DlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
|+|+..-+- . ..++.+.++|++||+++..
T Consensus 240 D~vid~~g~------~----~~~~~~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 240 SIAIDLVGT------E----ETTYNLGKLLAQEGAIILV 268 (344)
T ss_dssp EEEEESSCC------H----HHHHHHHHHEEEEEEEEEC
T ss_pred cEEEECCCC------h----HHHHHHHHHhhcCCEEEEe
Confidence 999865421 1 2466777899999998865
No 359
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=87.88 E-value=1.1 Score=42.16 Aligned_cols=92 Identities=14% Similarity=0.074 Sum_probs=57.2
Q ss_pred CEEEEECCCC-ChhH-HHHH-Hh-cCCeEEEEeCChH---HHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCc
Q 018352 33 VTVCDLYCGA-GVDV-DKWE-TA-LIANYIGIDVATS---GIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQ 105 (357)
Q Consensus 33 ~~VLDlGCG~-G~~l-~k~~-~~-~~~~v~GiDiS~~---~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~ 105 (357)
.+||-+|+|. |..+ ..++ +. +..+|+++|.+++ -++.+++. .+..+ |....++.. +....+.
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~l--------Ga~~v--~~~~~~~~~-i~~~~gg 242 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEEL--------DATYV--DSRQTPVED-VPDVYEQ 242 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHT--------TCEEE--ETTTSCGGG-HHHHSCC
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHc--------CCccc--CCCccCHHH-HHHhCCC
Confidence 8999999853 4455 5666 54 4434999999988 77777532 12222 433333332 2211237
Q ss_pred ccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 106 FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
+|+|+-..+ .. ..++.+.++|++||+++..
T Consensus 243 ~Dvvid~~g------~~----~~~~~~~~~l~~~G~iv~~ 272 (357)
T 2b5w_A 243 MDFIYEATG------FP----KHAIQSVQALAPNGVGALL 272 (357)
T ss_dssp EEEEEECSC------CH----HHHHHHHHHEEEEEEEEEC
T ss_pred CCEEEECCC------Ch----HHHHHHHHHHhcCCEEEEE
Confidence 999975442 11 2466777899999998866
No 360
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=87.82 E-value=2 Score=40.60 Aligned_cols=95 Identities=12% Similarity=0.086 Sum_probs=61.0
Q ss_pred CCCEEEEEC-CCC-ChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh-cCCcc
Q 018352 31 PYVTVCDLY-CGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE-KANQA 106 (357)
Q Consensus 31 ~~~~VLDlG-CG~-G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~-~~~~F 106 (357)
++.+||=+| +|. |..+..+++. +..+|+++|.+++-++.+++.-. . .+ .|... ++...+.. ..+.+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGa------d-~v--i~~~~-~~~~~v~~~~~~g~ 240 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGA------H-HV--IDHSK-PLAAEVAALGLGAP 240 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTC------S-EE--ECTTS-CHHHHHHTTCSCCE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCC------C-EE--EeCCC-CHHHHHHHhcCCCc
Confidence 577999998 553 6566777776 57799999999998888765211 1 11 22222 23222221 23579
Q ss_pred cEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 107 DlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
|+|+...+ ....+..+.++|++||+++..
T Consensus 241 Dvvid~~g----------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 241 AFVFSTTH----------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEEEECSC----------HHHHHHHHHHHSCTTCEEEEC
T ss_pred eEEEECCC----------chhhHHHHHHHhcCCCEEEEE
Confidence 99876431 123467778899999999866
No 361
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=87.68 E-value=2 Score=40.64 Aligned_cols=98 Identities=15% Similarity=0.135 Sum_probs=60.5
Q ss_pred CCCCCEEEEECCCC-ChhHHHHHHhc-CCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCC--Cchhhhhhh-cC
Q 018352 29 SHPYVTVCDLYCGA-GVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCA--ENFETQMQE-KA 103 (357)
Q Consensus 29 ~~~~~~VLDlGCG~-G~~l~k~~~~~-~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~--~~~~~~l~~-~~ 103 (357)
+.++.+||-+|+|. |..+..+++.. ..+|+++|.+++.++.+++.-. . .+ .|..+ .++...+.. ..
T Consensus 190 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa------~-~v--i~~~~~~~~~~~~~~~~~~ 260 (374)
T 1cdo_A 190 VEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGA------T-DF--VNPNDHSEPISQVLSKMTN 260 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC------C-EE--ECGGGCSSCHHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCC------c-eE--EeccccchhHHHHHHHHhC
Confidence 35789999999864 44556666654 4489999999998888764211 1 11 22221 123222211 12
Q ss_pred CcccEEEEccchhhccCCHHHHHHHHHHHHhcccCC-cEEEEE
Q 018352 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPG-GYFLGI 145 (357)
Q Consensus 104 ~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpG-G~fi~t 145 (357)
+.+|+|+..-.- ...+..+.++|++| |+++..
T Consensus 261 ~g~D~vid~~g~----------~~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 261 GGVDFSLECVGN----------VGVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp SCBSEEEECSCC----------HHHHHHHHHTBCTTTCEEEEC
T ss_pred CCCCEEEECCCC----------HHHHHHHHHHhhcCCcEEEEE
Confidence 479999764421 12467778899999 998865
No 362
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=87.45 E-value=2.4 Score=40.04 Aligned_cols=98 Identities=14% Similarity=0.147 Sum_probs=60.9
Q ss_pred CCCCCEEEEECCCC-ChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCC--Cchhhhhhh-cC
Q 018352 29 SHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCA--ENFETQMQE-KA 103 (357)
Q Consensus 29 ~~~~~~VLDlGCG~-G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~--~~~~~~l~~-~~ 103 (357)
+.++.+||-+|+|. |..+..+++. +..+|+++|.+++.++.+++.-. . .++ |..+ .++...+.. ..
T Consensus 188 ~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa------~-~vi--~~~~~~~~~~~~v~~~~~ 258 (373)
T 2fzw_A 188 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGA------T-ECI--NPQDFSKPIQEVLIEMTD 258 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTC------S-EEE--CGGGCSSCHHHHHHHHTT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCC------c-eEe--ccccccccHHHHHHHHhC
Confidence 35789999999864 4455566665 44489999999998888864311 1 112 2221 122222211 12
Q ss_pred CcccEEEEccchhhccCCHHHHHHHHHHHHhcccCC-cEEEEE
Q 018352 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPG-GYFLGI 145 (357)
Q Consensus 104 ~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpG-G~fi~t 145 (357)
+.+|+|+....- ...++.+.++|++| |+++..
T Consensus 259 ~g~D~vid~~g~----------~~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 259 GGVDYSFECIGN----------VKVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp SCBSEEEECSCC----------HHHHHHHHHTBCTTTCEEEEC
T ss_pred CCCCEEEECCCc----------HHHHHHHHHhhccCCcEEEEE
Confidence 479999764421 12467778899999 998865
No 363
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=87.26 E-value=1.2 Score=41.80 Aligned_cols=96 Identities=15% Similarity=0.066 Sum_probs=61.1
Q ss_pred CCCCCEEEEECCC--CChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh--cCC
Q 018352 29 SHPYVTVCDLYCG--AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KAN 104 (357)
Q Consensus 29 ~~~~~~VLDlGCG--~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~--~~~ 104 (357)
+.++.+||-.|++ -|..+..+++....+++++|.+++.++.+++.-. . .++..+ ..+...+.. ...
T Consensus 157 ~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga------~-~v~~~~---~~~~~~v~~~~~~~ 226 (342)
T 4eye_A 157 LRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGA------D-IVLPLE---EGWAKAVREATGGA 226 (342)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTC------S-EEEESS---TTHHHHHHHHTTTS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC------c-EEecCc---hhHHHHHHHHhCCC
Confidence 3478999999983 3556666666655599999999998887766311 1 122222 233222221 123
Q ss_pred cccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 105 ~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
.+|+|+...+-. .+..+.++|++||+++..
T Consensus 227 g~Dvvid~~g~~-----------~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 227 GVDMVVDPIGGP-----------AFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp CEEEEEESCC-------------CHHHHHHTEEEEEEEEEC
T ss_pred CceEEEECCchh-----------HHHHHHHhhcCCCEEEEE
Confidence 799998654321 356677899999999866
No 364
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=87.24 E-value=1.2 Score=41.73 Aligned_cols=98 Identities=16% Similarity=0.121 Sum_probs=62.8
Q ss_pred cCCCCCEEEEECCCC-ChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh--cC
Q 018352 28 YSHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KA 103 (357)
Q Consensus 28 ~~~~~~~VLDlGCG~-G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~--~~ 103 (357)
...++.+||-+|+|. |..+..+++. +..+|+++|.+++-++.+++.-. . .++..+ . .+.+.+.. ..
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa------~-~~i~~~--~-~~~~~v~~~t~g 237 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGA------D-AAVKSG--A-GAADAIRELTGG 237 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTC------S-EEEECS--T-THHHHHHHHHGG
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCC------C-EEEcCC--C-cHHHHHHHHhCC
Confidence 356889999999875 5556666665 47799999999998888765321 1 122221 1 22222211 12
Q ss_pred CcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 104 ~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
..+|+|+-.-+ .. ..+..+.++|++||+++..
T Consensus 238 ~g~d~v~d~~G------~~----~~~~~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 238 QGATAVFDFVG------AQ----STIDTAQQVVAVDGHISVV 269 (345)
T ss_dssp GCEEEEEESSC------CH----HHHHHHHHHEEEEEEEEEC
T ss_pred CCCeEEEECCC------CH----HHHHHHHHHHhcCCEEEEE
Confidence 47999976442 11 2467778899999999866
No 365
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=87.02 E-value=1.9 Score=40.78 Aligned_cols=98 Identities=16% Similarity=0.144 Sum_probs=60.3
Q ss_pred CCCCCEEEEECCCC-ChhHHHHHHhc-CCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCC--Cchhhhhhh-cC
Q 018352 29 SHPYVTVCDLYCGA-GVDVDKWETAL-IANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCA--ENFETQMQE-KA 103 (357)
Q Consensus 29 ~~~~~~VLDlGCG~-G~~l~k~~~~~-~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~--~~~~~~l~~-~~ 103 (357)
+.++.+||-+|+|. |..+..+++.. ..+|+++|.+++.++.+++.-. . ..+ |..+ .++...+.. ..
T Consensus 189 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa------~-~vi--~~~~~~~~~~~~~~~~~~ 259 (374)
T 2jhf_A 189 VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGA------T-ECV--NPQDYKKPIQEVLTEMSN 259 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC------S-EEE--CGGGCSSCHHHHHHHHTT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC------c-eEe--cccccchhHHHHHHHHhC
Confidence 35789999999874 54556666654 4489999999998888754211 1 112 2221 223222211 12
Q ss_pred CcccEEEEccchhhccCCHHHHHHHHHHHHhcccCC-cEEEEE
Q 018352 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPG-GYFLGI 145 (357)
Q Consensus 104 ~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpG-G~fi~t 145 (357)
+.+|+|+..-. . ...+..+.++|++| |+++..
T Consensus 260 ~g~D~vid~~g------~----~~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 260 GGVDFSFEVIG------R----LDTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp SCBSEEEECSC------C----HHHHHHHHHHBCTTTCEEEEC
T ss_pred CCCcEEEECCC------C----HHHHHHHHHHhhcCCcEEEEe
Confidence 47999976442 1 12466777899999 998865
No 366
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=86.96 E-value=1.4 Score=41.73 Aligned_cols=92 Identities=13% Similarity=0.064 Sum_probs=57.1
Q ss_pred CCEEEEECCCC-ChhHHHHHHhcCCeEEEEeCCh---HHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCccc
Q 018352 32 YVTVCDLYCGA-GVDVDKWETALIANYIGIDVAT---SGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (357)
Q Consensus 32 ~~~VLDlGCG~-G~~l~k~~~~~~~~v~GiDiS~---~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FD 107 (357)
+.+||-+|+|. |..+..+++....+|+++|.++ +-++.+++. .+..+ | .. .+...+....+.+|
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~--------ga~~v--~-~~-~~~~~~~~~~~~~d 248 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEET--------KTNYY--N-SS-NGYDKLKDSVGKFD 248 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHH--------TCEEE--E-CT-TCSHHHHHHHCCEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHh--------CCcee--c-hH-HHHHHHHHhCCCCC
Confidence 89999999843 3344555555334999999998 777666542 12222 3 22 32222211115799
Q ss_pred EEEEccchhhccCCHHHHHHHH-HHHHhcccCCcEEEEE
Q 018352 108 LVCCFQHLQMCFETEERARRLL-QNVSSLLKPGGYFLGI 145 (357)
Q Consensus 108 lV~~~~~lh~~fes~~~~~~~L-~~i~~~LkpGG~fi~t 145 (357)
+|+...+... .+ +.+.+.|++||.++..
T Consensus 249 ~vid~~g~~~----------~~~~~~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 249 VIIDATGADV----------NILGNVIPLLGRNGVLGLF 277 (366)
T ss_dssp EEEECCCCCT----------HHHHHHGGGEEEEEEEEEC
T ss_pred EEEECCCChH----------HHHHHHHHHHhcCCEEEEE
Confidence 9987553211 34 7788999999998866
No 367
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=86.82 E-value=0.51 Score=43.64 Aligned_cols=64 Identities=19% Similarity=0.237 Sum_probs=41.7
Q ss_pred eeEEEEcCCCCCchhhhhhhcCCcccEEEEccchhhc--cC--------------CHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 82 IAEFFEADPCAENFETQMQEKANQADLVCCFQHLQMC--FE--------------TEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 82 ~v~f~~~D~~~~~~~~~l~~~~~~FDlV~~~~~lh~~--fe--------------s~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
...++++|+... ...+ ++++||+|++.--.+.. .. .......+++++.++|||||.+++.
T Consensus 21 ~~~i~~gD~~~~--l~~l--~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~ 96 (297)
T 2zig_A 21 VHRLHVGDAREV--LASF--PEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIV 96 (297)
T ss_dssp CEEEEESCHHHH--HTTS--CTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCEEEECcHHHH--HhhC--CCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 467899998551 1111 35789999996543210 00 0122456788999999999999988
Q ss_pred eCCc
Q 018352 146 TPDS 149 (357)
Q Consensus 146 ~pd~ 149 (357)
+.+.
T Consensus 97 ~~d~ 100 (297)
T 2zig_A 97 VGDV 100 (297)
T ss_dssp ECCE
T ss_pred ECCC
Confidence 7654
No 368
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=86.64 E-value=0.69 Score=42.51 Aligned_cols=92 Identities=16% Similarity=0.062 Sum_probs=58.9
Q ss_pred CCCCCEEEEECC-C-CChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCC-CchhhhhhhcCCc
Q 018352 29 SHPYVTVCDLYC-G-AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCA-ENFETQMQEKANQ 105 (357)
Q Consensus 29 ~~~~~~VLDlGC-G-~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~-~~~~~~l~~~~~~ 105 (357)
+.++.+||-+|+ | .|..+..+++....+++++|.+++.++.+++. +. . .. .|... .++... -+.
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----ga--~-~~--~~~~~~~~~~~~----~~~ 189 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLAL----GA--E-EA--ATYAEVPERAKA----WGG 189 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHT----TC--S-EE--EEGGGHHHHHHH----TTS
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc----CC--C-EE--EECCcchhHHHH----hcC
Confidence 678899999998 3 35556666665445999999999888777542 11 1 11 12211 122111 157
Q ss_pred ccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 106 FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
+|+|+. .+- ..++.+.++|++||+++..
T Consensus 190 ~d~vid-~g~-----------~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 190 LDLVLE-VRG-----------KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp EEEEEE-CSC-----------TTHHHHHTTEEEEEEEEEC
T ss_pred ceEEEE-CCH-----------HHHHHHHHhhccCCEEEEE
Confidence 999987 532 1356778899999998765
No 369
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=86.32 E-value=2.8 Score=39.21 Aligned_cols=95 Identities=16% Similarity=0.104 Sum_probs=59.5
Q ss_pred CCCEEEEE-CCCC-ChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh-cCCccc
Q 018352 31 PYVTVCDL-YCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE-KANQAD 107 (357)
Q Consensus 31 ~~~~VLDl-GCG~-G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~-~~~~FD 107 (357)
++.+||=+ |+|. |..+..+++....+|+++|.+++-++.+++.-. . .. .|... ++...+.. ....+|
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa------~-~v--i~~~~-~~~~~~~~~~~~g~D 219 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGA------D-IV--LNHKE-SLLNQFKTQGIELVD 219 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTC------S-EE--ECTTS-CHHHHHHHHTCCCEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC------c-EE--EECCc-cHHHHHHHhCCCCcc
Confidence 68899999 4553 555566666655599999999998888876321 1 11 22222 23222211 235799
Q ss_pred EEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 108 LVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 108 lV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
+|+.... ....+..+.++|++||+++..
T Consensus 220 vv~d~~g----------~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 220 YVFCTFN----------TDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp EEEESSC----------HHHHHHHHHHHEEEEEEEEES
T ss_pred EEEECCC----------chHHHHHHHHHhccCCEEEEE
Confidence 9976432 123466777899999999755
No 370
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=86.17 E-value=9.9 Score=33.94 Aligned_cols=113 Identities=14% Similarity=0.012 Sum_probs=68.3
Q ss_pred CCCEEEEECCCCC--hh-HHHHHHhcCCeEEEEeCC------------hHHHHHHHHHhHhcCCCceeEEEEcCCCCCch
Q 018352 31 PYVTVCDLYCGAG--VD-VDKWETALIANYIGIDVA------------TSGIGEARDTWENQRKNFIAEFFEADPCAENF 95 (357)
Q Consensus 31 ~~~~VLDlGCG~G--~~-l~k~~~~~~~~v~GiDiS------------~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~ 95 (357)
.+.+||=.|++.| .. +..+++.+ .+|+.+|.+ ...++.+....... ..++.++.+|+.+..-
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~ 85 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEG-ADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT--GRKAYTAEVDVRDRAA 85 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT--TSCEEEEECCTTCHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCC-CeEEEEcccccccccccchhhhHHHHHHHHHHHhc--CCceEEEEccCCCHHH
Confidence 3568898898765 22 23333334 589999987 67777666655443 2368899999987432
Q ss_pred hhh----hhhcCCcccEEEEccchhhc--cCCHHHHH-----------HHHHHHHhcccCCcEEEEEe
Q 018352 96 ETQ----MQEKANQADLVCCFQHLQMC--FETEERAR-----------RLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 96 ~~~----l~~~~~~FDlV~~~~~lh~~--fes~~~~~-----------~~L~~i~~~LkpGG~fi~t~ 146 (357)
... .....+..|+++.+.+.... ..+.++.+ .+++.+...++.+|.++.+.
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 153 (287)
T 3pxx_A 86 VSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTG 153 (287)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEec
Confidence 111 11123579999887654221 01233322 35566777778888887663
No 371
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=85.93 E-value=7.8 Score=30.20 Aligned_cols=100 Identities=11% Similarity=-0.013 Sum_probs=55.4
Q ss_pred CCEEEEECCCC-ChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEEE
Q 018352 32 YVTVCDLYCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (357)
Q Consensus 32 ~~~VLDlGCG~-G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~ 110 (357)
+++|+=+|||. |..+.+.+.....+|+++|.+++.++..++.. .+.++.+|......... .....+|+|+
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~-------~~~~~~~d~~~~~~l~~--~~~~~~d~vi 74 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-------DALVINGDCTKIKTLED--AGIEDADMYI 74 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-------SSEEEESCTTSHHHHHH--TTTTTCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhc-------CcEEEEcCCCCHHHHHH--cCcccCCEEE
Confidence 46888899976 33333333333458999999988766554322 24567777654322110 1135689987
Q ss_pred EccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCC
Q 018352 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 111 ~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
+... +. .....+..+.+.+.++ .++...-+
T Consensus 75 ~~~~------~~-~~~~~~~~~~~~~~~~-~ii~~~~~ 104 (140)
T 1lss_A 75 AVTG------KE-EVNLMSSLLAKSYGIN-KTIARISE 104 (140)
T ss_dssp ECCS------CH-HHHHHHHHHHHHTTCC-CEEEECSS
T ss_pred EeeC------Cc-hHHHHHHHHHHHcCCC-EEEEEecC
Confidence 6532 11 2223444556667775 55555433
No 372
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=85.73 E-value=8.4 Score=34.14 Aligned_cols=109 Identities=15% Similarity=0.096 Sum_probs=67.5
Q ss_pred CCCEEEEECCCCC--h-hHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhh----hhhcC
Q 018352 31 PYVTVCDLYCGAG--V-DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEKA 103 (357)
Q Consensus 31 ~~~~VLDlGCG~G--~-~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~----l~~~~ 103 (357)
.+.+||=.|++.| . .+..+++.+ .+|+.+|.+++.++...+.+.. ++.++.+|+.+..-... .....
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGG-AEVLLTGRNESNIARIREEFGP-----RVHALRSDIADLNEIAVLGAAAGQTL 80 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHGG-----GEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHhCC-----cceEEEccCCCHHHHHHHHHHHHHHh
Confidence 3568898898765 1 223333344 5999999999888877666522 57899999987432111 11123
Q ss_pred CcccEEEEccchhhc--c--CCHHHHH-----------HHHHHHHhcccCCcEEEEE
Q 018352 104 NQADLVCCFQHLQMC--F--ETEERAR-----------RLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 104 ~~FDlV~~~~~lh~~--f--es~~~~~-----------~~L~~i~~~LkpGG~fi~t 145 (357)
+..|+++.+.+.... + .+.++.+ .+++.+...++.+|.++.+
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~i 137 (255)
T 4eso_A 81 GAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFT 137 (255)
T ss_dssp SSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 579998876643220 0 1333332 2455666777778888776
No 373
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=85.55 E-value=3 Score=39.43 Aligned_cols=98 Identities=16% Similarity=0.122 Sum_probs=60.2
Q ss_pred CCCCCEEEEECCCC-ChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCC--Cchhhhhhh-cC
Q 018352 29 SHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCA--ENFETQMQE-KA 103 (357)
Q Consensus 29 ~~~~~~VLDlGCG~-G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~--~~~~~~l~~-~~ 103 (357)
+.++.+||-+|+|. |..+..+++. +..+|+++|.+++-++.+++.-. . ..+ |... .++...+.. ..
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa------~-~vi--~~~~~~~~~~~~v~~~~~ 263 (376)
T 1e3i_A 193 VTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGA------T-DCL--NPRELDKPVQDVITELTA 263 (376)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC------S-EEE--CGGGCSSCHHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC------c-EEE--ccccccchHHHHHHHHhC
Confidence 34789999999874 4455666665 44489999999998887754211 1 111 2221 122222211 12
Q ss_pred CcccEEEEccchhhccCCHHHHHHHHHHHHhcccCC-cEEEEE
Q 018352 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPG-GYFLGI 145 (357)
Q Consensus 104 ~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpG-G~fi~t 145 (357)
+.+|+|+..-+ . ...+..+.++|++| |+++..
T Consensus 264 ~g~Dvvid~~G------~----~~~~~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 264 GGVDYSLDCAG------T----AQTLKAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp SCBSEEEESSC------C----HHHHHHHHHTBCTTTCEEEEC
T ss_pred CCccEEEECCC------C----HHHHHHHHHHhhcCCCEEEEE
Confidence 47999975432 1 12467778899999 998865
No 374
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=85.47 E-value=6.5 Score=31.84 Aligned_cols=104 Identities=7% Similarity=-0.048 Sum_probs=60.0
Q ss_pred CCEEEEECCCC-ChhHHHHHHhcCCeEEEEeCC-hHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEE
Q 018352 32 YVTVCDLYCGA-GVDVDKWETALIANYIGIDVA-TSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 32 ~~~VLDlGCG~-G~~l~k~~~~~~~~v~GiDiS-~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
..+|+=+|||. |..+.+.+......|+++|.+ ++.++....... . .+.++.+|..+....... .-...|+|
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~-~----~~~~i~gd~~~~~~l~~a--~i~~ad~v 75 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG-D----NADVIPGDSNDSSVLKKA--GIDRCRAI 75 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC-T----TCEEEESCTTSHHHHHHH--TTTTCSEE
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc-C----CCeEEEcCCCCHHHHHHc--ChhhCCEE
Confidence 35678888874 333333333344589999997 454444333222 1 367899998764432211 13578988
Q ss_pred EEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 110 ~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
++... + ......+....+.+.|...++...-+.
T Consensus 76 i~~~~------~-d~~n~~~~~~a~~~~~~~~ii~~~~~~ 108 (153)
T 1id1_A 76 LALSD------N-DADNAFVVLSAKDMSSDVKTVLAVSDS 108 (153)
T ss_dssp EECSS------C-HHHHHHHHHHHHHHTSSSCEEEECSSG
T ss_pred EEecC------C-hHHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 76431 2 234445566667777777777765554
No 375
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=85.36 E-value=2.2 Score=40.49 Aligned_cols=98 Identities=16% Similarity=0.180 Sum_probs=61.0
Q ss_pred CCCCCEEEEECCCC-ChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCC--CCchhhhhhh-cC
Q 018352 29 SHPYVTVCDLYCGA-GVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPC--AENFETQMQE-KA 103 (357)
Q Consensus 29 ~~~~~~VLDlGCG~-G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~--~~~~~~~l~~-~~ 103 (357)
+.++.+||=+|+|. |..+..+++. +..+|+++|.+++-++.|++.-. . .++ |.. ...+...+.. ..
T Consensus 191 ~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa------~-~vi--~~~~~~~~~~~~i~~~~~ 261 (378)
T 3uko_A 191 VEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGV------N-EFV--NPKDHDKPIQEVIVDLTD 261 (378)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTC------C-EEE--CGGGCSSCHHHHHHHHTT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCC------c-EEE--ccccCchhHHHHHHHhcC
Confidence 35788999999864 5555666665 55589999999998887754211 1 112 221 2223222211 23
Q ss_pred CcccEEEEccchhhccCCHHHHHHHHHHHHhcccCC-cEEEEE
Q 018352 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPG-GYFLGI 145 (357)
Q Consensus 104 ~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpG-G~fi~t 145 (357)
+.+|+|+...+ . ...+..+.++|++| |+++..
T Consensus 262 gg~D~vid~~g------~----~~~~~~~~~~l~~g~G~iv~~ 294 (378)
T 3uko_A 262 GGVDYSFECIG------N----VSVMRAALECCHKGWGTSVIV 294 (378)
T ss_dssp SCBSEEEECSC------C----HHHHHHHHHTBCTTTCEEEEC
T ss_pred CCCCEEEECCC------C----HHHHHHHHHHhhccCCEEEEE
Confidence 48999976442 1 12467778899997 998866
No 376
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=85.21 E-value=2.5 Score=39.77 Aligned_cols=97 Identities=11% Similarity=-0.008 Sum_probs=61.3
Q ss_pred CCCCCEEEEECC-C-CChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh-cCCc
Q 018352 29 SHPYVTVCDLYC-G-AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE-KANQ 105 (357)
Q Consensus 29 ~~~~~~VLDlGC-G-~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~-~~~~ 105 (357)
+.++.+||-+|+ | -|..+..+++....+|+++|.+++.++.+++.-. . .. .|....++...+.. ..+.
T Consensus 165 ~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa------~-~~--~~~~~~~~~~~~~~~~~~g 235 (353)
T 4dup_A 165 LTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGA------K-RG--INYRSEDFAAVIKAETGQG 235 (353)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTC------S-EE--EETTTSCHHHHHHHHHSSC
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC------C-EE--EeCCchHHHHHHHHHhCCC
Confidence 347899999953 3 3555666666655599999999998888765311 1 11 23333333222211 1357
Q ss_pred ccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 106 FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
+|+|+...+-. .+....++|++||.++..
T Consensus 236 ~Dvvid~~g~~-----------~~~~~~~~l~~~G~iv~~ 264 (353)
T 4dup_A 236 VDIILDMIGAA-----------YFERNIASLAKDGCLSII 264 (353)
T ss_dssp EEEEEESCCGG-----------GHHHHHHTEEEEEEEEEC
T ss_pred ceEEEECCCHH-----------HHHHHHHHhccCCEEEEE
Confidence 99998755321 356677899999998865
No 377
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=85.03 E-value=1.2 Score=41.07 Aligned_cols=89 Identities=11% Similarity=-0.077 Sum_probs=56.2
Q ss_pred CCCCCEEEEECCCC-ChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCccc
Q 018352 29 SHPYVTVCDLYCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (357)
Q Consensus 29 ~~~~~~VLDlGCG~-G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FD 107 (357)
+.++.+||=+|+|. |..+..+++....+|+++| |++-++.+++.- +..+.-| . ..+ ...+|
T Consensus 140 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~lG--------a~~v~~d-----~-~~v---~~g~D 201 (315)
T 3goh_A 140 LTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKRG--------VRHLYRE-----P-SQV---TQKYF 201 (315)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHHT--------EEEEESS-----G-GGC---CSCEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHcC--------CCEEEcC-----H-HHh---CCCcc
Confidence 34789999999963 5566666666445999999 998888876531 1212212 1 112 46799
Q ss_pred EEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEe
Q 018352 108 LVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 108 lV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~ 146 (357)
+|+-.-+- + .+..+.++|++||+++...
T Consensus 202 vv~d~~g~-------~----~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 202 AIFDAVNS-------Q----NAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp EEECC------------------TTGGGEEEEEEEEEEC
T ss_pred EEEECCCc-------h----hHHHHHHHhcCCCEEEEEe
Confidence 98753311 1 1255678999999998773
No 378
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=85.02 E-value=4.9 Score=34.78 Aligned_cols=100 Identities=8% Similarity=-0.005 Sum_probs=59.9
Q ss_pred EEEEECCCC-ChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEEEEc
Q 018352 34 TVCDLYCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVCCF 112 (357)
Q Consensus 34 ~VLDlGCG~-G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~~~ 112 (357)
+|+=+|+|. |..+.+.+......|+++|.+++.++...+.. ...++.+|..+....... .-...|+|++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~-------~~~~i~gd~~~~~~l~~a--~i~~ad~vi~~ 72 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL-------KATIIHGDGSHKEILRDA--EVSKNDVVVIL 72 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS-------SSEEEESCTTSHHHHHHH--TCCTTCEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc-------CCeEEEcCCCCHHHHHhc--CcccCCEEEEe
Confidence 577788775 33333333334458999999998877654332 356799998775432211 23578998764
Q ss_pred cchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 113 QHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 113 ~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
. .+ +.....+....+.+.+...++...-+.
T Consensus 73 ~------~~-d~~n~~~~~~a~~~~~~~~iia~~~~~ 102 (218)
T 3l4b_C 73 T------PR-DEVNLFIAQLVMKDFGVKRVVSLVNDP 102 (218)
T ss_dssp C------SC-HHHHHHHHHHHHHTSCCCEEEECCCSG
T ss_pred c------CC-cHHHHHHHHHHHHHcCCCeEEEEEeCc
Confidence 3 12 223445555566666767766655444
No 379
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=85.01 E-value=14 Score=32.69 Aligned_cols=115 Identities=6% Similarity=-0.036 Sum_probs=68.0
Q ss_pred CCCEEEEECCC--CC--hhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhh----hhhc
Q 018352 31 PYVTVCDLYCG--AG--VDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEK 102 (357)
Q Consensus 31 ~~~~VLDlGCG--~G--~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~----l~~~ 102 (357)
.+.+||=.|++ .| ..+.+.+.....+|+.+|.++...+.+.+...... ..++.++.+|+.+..-... +...
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLD-RNDSIILPCDVTNDAEIETCFASIKEQ 84 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSS-SCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcC-CCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence 35688888876 44 33333333344589999998766655555444322 1268899999987542221 1112
Q ss_pred CCcccEEEEccchhh--------ccCCHHHHH-----------HHHHHHHhcccCCcEEEEEe
Q 018352 103 ANQADLVCCFQHLQM--------CFETEERAR-----------RLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 103 ~~~FDlV~~~~~lh~--------~fes~~~~~-----------~~L~~i~~~LkpGG~fi~t~ 146 (357)
.+..|+++.+.++.. .-.+.+... .+++.+...++++|.++.+.
T Consensus 85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 147 (266)
T 3oig_A 85 VGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLT 147 (266)
T ss_dssp HSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred hCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEe
Confidence 357899887654321 012333333 35667777888889888763
No 380
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=84.29 E-value=13 Score=33.55 Aligned_cols=113 Identities=14% Similarity=0.064 Sum_probs=66.1
Q ss_pred CCCEEEEECCCCC--h-hHHHHHHhcCCeEEEEeCChHH-HHHHHHHhHhcCCCceeEEEEcCCCCCchhh----hhhhc
Q 018352 31 PYVTVCDLYCGAG--V-DVDKWETALIANYIGIDVATSG-IGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEK 102 (357)
Q Consensus 31 ~~~~VLDlGCG~G--~-~l~k~~~~~~~~v~GiDiS~~~-l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~----~l~~~ 102 (357)
.+.+||=.|++.| . .+..+++.+ .+|+.+|.+... .+.+.+..+.. ..++.++.+|+.+..-.. .....
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEG-ANIAIAYLDEEGDANETKQYVEKE--GVKCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHTT--TCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCchHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 3568999998765 1 223333334 589999998753 33344433332 236889999998743211 11112
Q ss_pred CCcccEEEEccchhhc---c--CCHHHHH-----------HHHHHHHhcccCCcEEEEEe
Q 018352 103 ANQADLVCCFQHLQMC---F--ETEERAR-----------RLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 103 ~~~FDlV~~~~~lh~~---f--es~~~~~-----------~~L~~i~~~LkpGG~fi~t~ 146 (357)
.+..|+++.+.+.... + .+.++.+ .+++.+...++.+|.++.+.
T Consensus 123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 3579999876543221 1 1333332 35667777888899887663
No 381
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=83.88 E-value=14 Score=33.07 Aligned_cols=135 Identities=14% Similarity=-0.038 Sum_probs=69.1
Q ss_pred CCcchHHHHHHHHHHHHHHHcCCCCCEEEEECCCCC--h-hHHHHHHhcCCeEEEEeCC-hHHHHHHHHHhHhcCCCcee
Q 018352 8 RSELTHHRLYEFAKTALIKIYSHPYVTVCDLYCGAG--V-DVDKWETALIANYIGIDVA-TSGIGEARDTWENQRKNFIA 83 (357)
Q Consensus 8 r~~~p~~~~~nwvks~Li~~~~~~~~~VLDlGCG~G--~-~l~k~~~~~~~~v~GiDiS-~~~l~~A~~r~~~~~~~~~v 83 (357)
|.+++.....|-....+.....-.+.+||=.|++.| . .+..+++.+ .+|+.+|.. ...++...+..+..+ .++
T Consensus 7 ~~~~~~~~~~~~~~~~mm~~~~l~gk~~lVTGas~GIG~aia~~la~~G-~~V~~~~~~~~~~~~~~~~~l~~~~--~~~ 83 (271)
T 3v2g_A 7 HSSGVDLGTENLYFQSMMTSISLAGKTAFVTGGSRGIGAAIAKRLALEG-AAVALTYVNAAERAQAVVSEIEQAG--GRA 83 (271)
T ss_dssp -------------CHHHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTT--CCE
T ss_pred ccccccccccccchhhhccccCCCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCCHHHHHHHHHHHHhcC--CcE
Confidence 344443333333222333333335678999998776 1 223333334 488888665 455555555554332 267
Q ss_pred EEEEcCCCCCchhhh----hhhcCCcccEEEEccchhhc----cCCHHHHH-----------HHHHHHHhcccCCcEEEE
Q 018352 84 EFFEADPCAENFETQ----MQEKANQADLVCCFQHLQMC----FETEERAR-----------RLLQNVSSLLKPGGYFLG 144 (357)
Q Consensus 84 ~f~~~D~~~~~~~~~----l~~~~~~FDlV~~~~~lh~~----fes~~~~~-----------~~L~~i~~~LkpGG~fi~ 144 (357)
.++.+|+.+..-... .....+..|+++.+.+.... -.+.++.+ .+++.+...++.+|.++.
T Consensus 84 ~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~ 163 (271)
T 3v2g_A 84 VAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIIT 163 (271)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEE
T ss_pred EEEECCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEE
Confidence 889999987432111 11123579999887654220 01233322 356667777888898887
Q ss_pred E
Q 018352 145 I 145 (357)
Q Consensus 145 t 145 (357)
+
T Consensus 164 i 164 (271)
T 3v2g_A 164 I 164 (271)
T ss_dssp E
T ss_pred E
Confidence 6
No 382
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=82.89 E-value=6.1 Score=36.64 Aligned_cols=98 Identities=12% Similarity=0.081 Sum_probs=58.9
Q ss_pred CCCCCEEEEECCCCCh-hHHHHHH-hcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh--cCC
Q 018352 29 SHPYVTVCDLYCGAGV-DVDKWET-ALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KAN 104 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~-~l~k~~~-~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~--~~~ 104 (357)
..++.+||=+|+|.++ .+..+++ .+..+|+++|.+++-++.+++.-.. . ..|..+.+..+.+.. ...
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~-------~--~i~~~~~~~~~~v~~~t~g~ 231 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGAD-------V--TINSGDVNPVDEIKKITGGL 231 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCS-------E--EEEC-CCCHHHHHHHHTTSS
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCe-------E--EEeCCCCCHHHHhhhhcCCC
Confidence 5688999999998754 3344444 3577999999999887766554221 1 122223333332221 123
Q ss_pred cccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 105 ~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
.+|.++.... . ...+....++|++||.++..
T Consensus 232 g~d~~~~~~~------~----~~~~~~~~~~l~~~G~~v~~ 262 (348)
T 4eez_A 232 GVQSAIVCAV------A----RIAFEQAVASLKPMGKMVAV 262 (348)
T ss_dssp CEEEEEECCS------C----HHHHHHHHHTEEEEEEEEEC
T ss_pred CceEEEEecc------C----cchhheeheeecCCceEEEE
Confidence 5666654321 1 23466777899999998866
No 383
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=82.87 E-value=3.2 Score=42.87 Aligned_cols=120 Identities=14% Similarity=0.242 Sum_probs=67.6
Q ss_pred CCCEEEEECCCCChhHHHHHHh-----------c--CCeEEEEeC---ChHHHHHHHHHhHh-----------c------
Q 018352 31 PYVTVCDLYCGAGVDVDKWETA-----------L--IANYIGIDV---ATSGIGEARDTWEN-----------Q------ 77 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~-----------~--~~~v~GiDi---S~~~l~~A~~r~~~-----------~------ 77 (357)
+..+|||+|.|+|-......+. . .-+++.++. +.+-+..|-..+.. -
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 4469999999999654432221 1 147999998 66666554322111 0
Q ss_pred -------CCCceeEEEEcCCCCCchhhhhhh-cCCcccEEEEccchhhccCCHHH----HHHHHHHHHhcccCCcEEEEE
Q 018352 78 -------RKNFIAEFFEADPCAENFETQMQE-KANQADLVCCFQHLQMCFETEER----ARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 78 -------~~~~~v~f~~~D~~~~~~~~~l~~-~~~~FDlV~~~~~lh~~fes~~~----~~~~L~~i~~~LkpGG~fi~t 145 (357)
.....++++.+|+... + ..+.. ....+|+++.-. |..... -..++..+.++++|||.+. +
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~-l-~~~~~~~~~~~da~flD~-----f~p~~np~~w~~~~~~~l~~~~~~g~~~~-t 209 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTL-L-PTLDDSLNNQVDAWFLDG-----FAPAKNPDMWNEQLFNAMARMTRPGGTFS-T 209 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHH-G-GGCCGGGTTCEEEEEECS-----SCC--CCTTCSHHHHHHHHHHEEEEEEEE-E
T ss_pred ceEEEecCCcEEEEEEccCHHHH-H-hhcccccCCceeEEEECC-----CCCCCChhhhhHHHHHHHHHHhCCCCEEE-e
Confidence 0012456667776431 1 11110 146899997643 311110 2568899999999999754 4
Q ss_pred eCCchHHHHHHHH
Q 018352 146 TPDSSTIWAKYQK 158 (357)
Q Consensus 146 ~pd~~~i~~~~~~ 158 (357)
......+.+.+.+
T Consensus 210 ~~~~~~vr~~l~~ 222 (689)
T 3pvc_A 210 FTAAGFVRRGLQQ 222 (689)
T ss_dssp SCCCHHHHHHHHH
T ss_pred ccCcHHHHHHHHh
Confidence 4445566655554
No 384
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=82.65 E-value=12 Score=33.99 Aligned_cols=112 Identities=11% Similarity=-0.046 Sum_probs=65.9
Q ss_pred CCEEEEECCCC--C--hhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhh----hhhcC
Q 018352 32 YVTVCDLYCGA--G--VDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEKA 103 (357)
Q Consensus 32 ~~~VLDlGCG~--G--~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~----l~~~~ 103 (357)
+.+||=.|++. | ..+.+.+.....+|+.+|.++...+.+.+..+... .+.++.+|+.+..-... .....
T Consensus 30 ~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~~ 106 (296)
T 3k31_A 30 GKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLG---VKLTVPCDVSDAESVDNMFKVLAEEW 106 (296)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHT---CCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC---CeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 56889888753 3 33333333344589999999866555554443332 35789999987432111 11123
Q ss_pred CcccEEEEccchhhc--------cCCHHHHH-----------HHHHHHHhcccCCcEEEEEe
Q 018352 104 NQADLVCCFQHLQMC--------FETEERAR-----------RLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 104 ~~FDlV~~~~~lh~~--------fes~~~~~-----------~~L~~i~~~LkpGG~fi~t~ 146 (357)
+..|+++.+.++... -.+.++.. .+++.+...++.+|.++.+.
T Consensus 107 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~is 168 (296)
T 3k31_A 107 GSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLS 168 (296)
T ss_dssp SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred CCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEE
Confidence 579999887654320 12333332 35566677777889888763
No 385
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=82.42 E-value=3.2 Score=33.90 Aligned_cols=103 Identities=12% Similarity=0.124 Sum_probs=58.4
Q ss_pred CCCEEEEECCCC-ChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhc-CCcccE
Q 018352 31 PYVTVCDLYCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEK-ANQADL 108 (357)
Q Consensus 31 ~~~~VLDlGCG~-G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~-~~~FDl 108 (357)
++.+|+=+|||. |..+...+.....+|+++|.+++.++.++. . ..+.++.+|...... +... ...+|+
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~----~g~~~~~~d~~~~~~---l~~~~~~~ad~ 87 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---E----FSGFTVVGDAAEFET---LKECGMEKADM 87 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---T----CCSEEEESCTTSHHH---HHTTTGGGCSE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---c----CCCcEEEecCCCHHH---HHHcCcccCCE
Confidence 567999999986 444444444444589999999875443211 1 134566777654221 1111 246899
Q ss_pred EEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCch
Q 018352 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~ 150 (357)
|++... +.. ....+..+.+.+.+...++...-+..
T Consensus 88 Vi~~~~------~~~-~~~~~~~~~~~~~~~~~iv~~~~~~~ 122 (155)
T 2g1u_A 88 VFAFTN------DDS-TNFFISMNARYMFNVENVIARVYDPE 122 (155)
T ss_dssp EEECSS------CHH-HHHHHHHHHHHTSCCSEEEEECSSGG
T ss_pred EEEEeC------CcH-HHHHHHHHHHHHCCCCeEEEEECCHH
Confidence 876442 222 33344445555666667776655543
No 386
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=81.48 E-value=17 Score=33.44 Aligned_cols=84 Identities=13% Similarity=0.019 Sum_probs=55.4
Q ss_pred CCCEEEEECCCCCh---hHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhh----hhhhcC
Q 018352 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKA 103 (357)
Q Consensus 31 ~~~~VLDlGCG~G~---~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~----~l~~~~ 103 (357)
.+.+||=.|++.|- .+..++..+ .+|+++|.+.+.++.+.+.+.......++.++.+|+.+..-.. ......
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G-~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQG-CKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF 85 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence 35689999987762 223333334 4899999999998888777655433336889999998743211 111223
Q ss_pred CcccEEEEccch
Q 018352 104 NQADLVCCFQHL 115 (357)
Q Consensus 104 ~~FDlV~~~~~l 115 (357)
+..|+++.+.++
T Consensus 86 g~id~lv~nAg~ 97 (319)
T 3ioy_A 86 GPVSILCNNAGV 97 (319)
T ss_dssp CCEEEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 678999887654
No 387
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=81.29 E-value=15 Score=32.95 Aligned_cols=83 Identities=8% Similarity=-0.060 Sum_probs=53.9
Q ss_pred CCCEEEEECCCCC--h-hHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCC-chhh----hhhhc
Q 018352 31 PYVTVCDLYCGAG--V-DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAE-NFET----QMQEK 102 (357)
Q Consensus 31 ~~~~VLDlGCG~G--~-~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~-~~~~----~l~~~ 102 (357)
.+.+||=.|++.| . .+..+++.+ .+|++++.+...++.+.+.+.... ..++.++.+|+.+. .-.. .+...
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~v~~~~~~~~~~ 88 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSNG-IMVVLTCRDVTKGHEAVEKLKNSN-HENVVFHQLDVTDPIATMSSLADFIKTH 88 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHTTT-CCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcC-CCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence 3568888887765 1 223333334 599999999998888777665432 22688999999885 3211 12122
Q ss_pred CCcccEEEEccch
Q 018352 103 ANQADLVCCFQHL 115 (357)
Q Consensus 103 ~~~FDlV~~~~~l 115 (357)
.+..|+++.+.++
T Consensus 89 ~g~iD~lv~nAg~ 101 (311)
T 3o26_A 89 FGKLDILVNNAGV 101 (311)
T ss_dssp HSSCCEEEECCCC
T ss_pred CCCCCEEEECCcc
Confidence 3579999987764
No 388
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=81.21 E-value=2.3 Score=40.19 Aligned_cols=96 Identities=21% Similarity=0.125 Sum_probs=58.0
Q ss_pred CC-CCCEEEEECCCC-ChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcc
Q 018352 29 SH-PYVTVCDLYCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (357)
Q Consensus 29 ~~-~~~~VLDlGCG~-G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~F 106 (357)
.. ++.+||=+|+|. |..+..+++....+|+++|.+++.++.+++.+.. . .++ |..+. +.+....+.+
T Consensus 184 ~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa-----~-~v~--~~~~~---~~~~~~~~~~ 252 (366)
T 1yqd_A 184 LDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGA-----D-SFL--VSRDQ---EQMQAAAGTL 252 (366)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCC-----S-EEE--ETTCH---HHHHHTTTCE
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCC-----c-eEE--eccCH---HHHHHhhCCC
Confidence 44 789999999763 4455566665445899999999887776543321 1 112 22221 1111123479
Q ss_pred cEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 107 DlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
|+|+....... .++.+.++|++||+++..
T Consensus 253 D~vid~~g~~~----------~~~~~~~~l~~~G~iv~~ 281 (366)
T 1yqd_A 253 DGIIDTVSAVH----------PLLPLFGLLKSHGKLILV 281 (366)
T ss_dssp EEEEECCSSCC----------CSHHHHHHEEEEEEEEEC
T ss_pred CEEEECCCcHH----------HHHHHHHHHhcCCEEEEE
Confidence 99986553221 134456788999998865
No 389
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=81.00 E-value=15 Score=34.00 Aligned_cols=105 Identities=13% Similarity=0.064 Sum_probs=60.3
Q ss_pred CCEEEEECCCC-ChhHH-HHHHhcCC-eEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccE
Q 018352 32 YVTVCDLYCGA-GVDVD-KWETALIA-NYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADL 108 (357)
Q Consensus 32 ~~~VLDlGCG~-G~~l~-k~~~~~~~-~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDl 108 (357)
..+|.=||+|. |+.+. .+...+.. +|+++|.+++.++.+.+. +.. .. ...|.... . -...|+
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~----G~~--~~-~~~~~~~~-~-------~~~aDv 97 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL----GII--DE-GTTSIAKV-E-------DFSPDF 97 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT----TSC--SE-EESCTTGG-G-------GGCCSE
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHC----CCc--ch-hcCCHHHH-h-------hccCCE
Confidence 36899999996 43333 34344432 899999999888776532 110 01 11222100 1 145899
Q ss_pred EEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCchHHHHHHHH
Q 018352 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSSTIWAKYQK 158 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~i~~~~~~ 158 (357)
|+..-.. .....+++++...|++|.+++-+......+.+.+.+
T Consensus 98 Vilavp~-------~~~~~vl~~l~~~l~~~~iv~d~~Svk~~~~~~~~~ 140 (314)
T 3ggo_A 98 VMLSSPV-------RTFREIAKKLSYILSEDATVTDQGSVKGKLVYDLEN 140 (314)
T ss_dssp EEECSCG-------GGHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHH
T ss_pred EEEeCCH-------HHHHHHHHHHhhccCCCcEEEECCCCcHHHHHHHHH
Confidence 8765422 235567888989999987665433333344555543
No 390
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=80.85 E-value=15 Score=33.24 Aligned_cols=112 Identities=14% Similarity=0.072 Sum_probs=65.7
Q ss_pred CCCEEEEECCCCC--h-hHHHHHHhcCCeEEEEeCC--hHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhh----hhhh
Q 018352 31 PYVTVCDLYCGAG--V-DVDKWETALIANYIGIDVA--TSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQE 101 (357)
Q Consensus 31 ~~~~VLDlGCG~G--~-~l~k~~~~~~~~v~GiDiS--~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~----~l~~ 101 (357)
.+.+||=.|++.| . .+..+++.+ .+|+.+|.+ ...++...+..+..+ .++.++.+|+.+..-.. ....
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~ 124 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREG-ADVAINYLPAEEEDAQQVKALIEECG--RKAVLLPGDLSDESFARSLVHKARE 124 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEECCGGGHHHHHHHHHHHHHTT--CCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCcchhHHHHHHHHHHHcC--CcEEEEEecCCCHHHHHHHHHHHHH
Confidence 3568999998765 1 223333334 589999887 344444444444332 36788999998743211 1111
Q ss_pred cCCcccEEEEccchhhc---c--CCHHHHH-----------HHHHHHHhcccCCcEEEEE
Q 018352 102 KANQADLVCCFQHLQMC---F--ETEERAR-----------RLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 102 ~~~~FDlV~~~~~lh~~---f--es~~~~~-----------~~L~~i~~~LkpGG~fi~t 145 (357)
..+..|+++.+.+.... + .+.++.+ .+++.+...++.+|.++.+
T Consensus 125 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~i 184 (294)
T 3r3s_A 125 ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITT 184 (294)
T ss_dssp HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEE
Confidence 23579999887654221 1 1233332 3566677788888988876
No 391
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=80.83 E-value=11 Score=33.99 Aligned_cols=104 Identities=15% Similarity=0.075 Sum_probs=53.9
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHHcCCCCCEEEEECCCCC--h-hHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCC
Q 018352 3 VLPIPRSELTHHRLYEFAKTALIKIYSHPYVTVCDLYCGAG--V-DVDKWETALIANYIGIDVATSGIGEARDTWENQRK 79 (357)
Q Consensus 3 ~~~~~r~~~p~~~~~nwvks~Li~~~~~~~~~VLDlGCG~G--~-~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~ 79 (357)
++|.++++.+.+.+. .++.+ .-.+.+||=.|++.| . .+..+++.+ .+|+.+|.+.+.++.+.+.+...
T Consensus 5 ~~~~~~~~~~~~~~~--~~~m~----~~~~k~~lVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~l~~~-- 75 (283)
T 3v8b_A 5 HHHSSGVDLGTENLY--FQSMM----NQPSPVALITGAGSGIGRATALALAADG-VTVGALGRTRTEVEEVADEIVGA-- 75 (283)
T ss_dssp ----------------------------CCCEEEEESCSSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHHTTT--
T ss_pred cCCccccccccchhh--hhhhc----CCCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhc--
Confidence 466667776665532 22221 124578898998776 2 223333334 59999999999888877766543
Q ss_pred CceeEEEEcCCCCCchhh----hhhhcCCcccEEEEccch
Q 018352 80 NFIAEFFEADPCAENFET----QMQEKANQADLVCCFQHL 115 (357)
Q Consensus 80 ~~~v~f~~~D~~~~~~~~----~l~~~~~~FDlV~~~~~l 115 (357)
..++.++.+|+.+..-.. ......+..|+++.+.+.
T Consensus 76 ~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~ 115 (283)
T 3v8b_A 76 GGQAIALEADVSDELQMRNAVRDLVLKFGHLDIVVANAGI 115 (283)
T ss_dssp TCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCC
Confidence 236889999998743211 111123579999887654
No 392
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=80.12 E-value=3.8 Score=38.30 Aligned_cols=94 Identities=21% Similarity=0.028 Sum_probs=59.1
Q ss_pred CCCCCEEEEECC-C-CChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh--cCC
Q 018352 29 SHPYVTVCDLYC-G-AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KAN 104 (357)
Q Consensus 29 ~~~~~~VLDlGC-G-~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~--~~~ 104 (357)
+.++.+||-+|+ | -|..+..+++....+|+++ .+++-++.+++.- +..+ | ...++...+.. ...
T Consensus 148 ~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lG--------a~~i--~-~~~~~~~~~~~~~~~~ 215 (343)
T 3gaz_A 148 VQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLG--------ATPI--D-ASREPEDYAAEHTAGQ 215 (343)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHT--------SEEE--E-TTSCHHHHHHHHHTTS
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcC--------CCEe--c-cCCCHHHHHHHHhcCC
Confidence 347899999995 3 3556666666655599999 8888877775431 1222 2 22333222211 235
Q ss_pred cccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 105 ~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
.+|+|+..-+ . ..+..+.++|++||.++..
T Consensus 216 g~D~vid~~g------~-----~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 216 GFDLVYDTLG------G-----PVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp CEEEEEESSC------T-----HHHHHHHHHEEEEEEEEES
T ss_pred CceEEEECCC------c-----HHHHHHHHHHhcCCeEEEE
Confidence 7999976442 1 2466777899999999865
No 393
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=79.87 E-value=14 Score=33.20 Aligned_cols=82 Identities=11% Similarity=0.071 Sum_probs=56.3
Q ss_pred CCCEEEEECCCCCh---hHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhh----hhhcC
Q 018352 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEKA 103 (357)
Q Consensus 31 ~~~~VLDlGCG~G~---~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~----l~~~~ 103 (357)
++..+|=-|.+.|- .+..+++ ...+|+.+|.+++.++.+.+.++..+ .++.++++|+.+..-... ....-
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~-~Ga~Vv~~~~~~~~~~~~~~~i~~~g--~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFAL-NDSIVVAVELLEDRLNQIVQELRGMG--KEVLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 46778888888772 2333433 44599999999999998888876653 368899999987542221 11234
Q ss_pred CcccEEEEccch
Q 018352 104 NQADLVCCFQHL 115 (357)
Q Consensus 104 ~~FDlV~~~~~l 115 (357)
+..|+++.+.++
T Consensus 83 G~iDiLVNNAGi 94 (254)
T 4fn4_A 83 SRIDVLCNNAGI 94 (254)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 789999887653
No 394
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=79.53 E-value=14 Score=33.96 Aligned_cols=98 Identities=9% Similarity=0.016 Sum_probs=59.6
Q ss_pred CCCCCEEEEECCCCCh-hHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhh--hcCC
Q 018352 29 SHPYVTVCDLYCGAGV-DVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQ--EKAN 104 (357)
Q Consensus 29 ~~~~~~VLDlGCG~G~-~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~--~~~~ 104 (357)
..++.+||=.|+|..+ .+..+++. +...++++|.+++-++.|++.-. . ..+ |....+..+... ....
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa------~-~~i--~~~~~~~~~~~~~~~~~~ 228 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGA------M-QTF--NSSEMSAPQMQSVLRELR 228 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC------S-EEE--ETTTSCHHHHHHHHGGGC
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCC------e-EEE--eCCCCCHHHHHHhhcccC
Confidence 4578999999998644 34444444 56678999999998887765421 1 112 222222221111 1235
Q ss_pred cccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 105 ~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
.+|+|+...+ +. ..++.+.++|++||.++..
T Consensus 229 g~d~v~d~~G------~~----~~~~~~~~~l~~~G~~v~~ 259 (346)
T 4a2c_A 229 FNQLILETAG------VP----QTVELAVEIAGPHAQLALV 259 (346)
T ss_dssp SSEEEEECSC------SH----HHHHHHHHHCCTTCEEEEC
T ss_pred Cccccccccc------cc----chhhhhhheecCCeEEEEE
Confidence 6888875432 11 2456677899999998866
No 395
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=79.28 E-value=27 Score=30.72 Aligned_cols=82 Identities=9% Similarity=-0.063 Sum_probs=54.1
Q ss_pred CCCEEEEECCCCC--hh-HHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhh----hhhcC
Q 018352 31 PYVTVCDLYCGAG--VD-VDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEKA 103 (357)
Q Consensus 31 ~~~~VLDlGCG~G--~~-l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~----l~~~~ 103 (357)
.+.+||=.|++.| .. +..+++.+ .+|+.+|.+.+.++...+.+.... .++.++.+|+.+..-... +....
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~ 104 (262)
T 3rkr_A 28 SGQVAVVTGASRGIGAAIARKLGSLG-ARVVLTARDVEKLRAVEREIVAAG--GEAESHACDLSHSDAIAAFATGVLAAH 104 (262)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHHhC--CceeEEEecCCCHHHHHHHHHHHHHhc
Confidence 4678998897765 22 23333334 589999999999888777765542 368899999987432111 11123
Q ss_pred CcccEEEEccch
Q 018352 104 NQADLVCCFQHL 115 (357)
Q Consensus 104 ~~FDlV~~~~~l 115 (357)
+..|+++.+.+.
T Consensus 105 g~id~lv~~Ag~ 116 (262)
T 3rkr_A 105 GRCDVLVNNAGV 116 (262)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 579999887654
No 396
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=79.18 E-value=2.1 Score=40.40 Aligned_cols=96 Identities=21% Similarity=0.102 Sum_probs=57.4
Q ss_pred CC-CCCEEEEECCCC-ChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcc
Q 018352 29 SH-PYVTVCDLYCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (357)
Q Consensus 29 ~~-~~~~VLDlGCG~-G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~F 106 (357)
.. ++.+||=+|+|. |..+..+++....+++++|.+++-++.+++.+.. . .++ |..+. +.+....+.+
T Consensus 177 ~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa-----~-~vi--~~~~~---~~~~~~~~g~ 245 (357)
T 2cf5_A 177 LKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGA-----D-DYV--IGSDQ---AKMSELADSL 245 (357)
T ss_dssp TTSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCC-----S-CEE--ETTCH---HHHHHSTTTE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCC-----c-eee--ccccH---HHHHHhcCCC
Confidence 44 789999999863 4455556555445899999998877766533211 1 112 11111 1111123479
Q ss_pred cEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 107 DlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
|+|+..-.-.. .++...++|++||+++..
T Consensus 246 D~vid~~g~~~----------~~~~~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 246 DYVIDTVPVHH----------ALEPYLSLLKLDGKLILM 274 (357)
T ss_dssp EEEEECCCSCC----------CSHHHHTTEEEEEEEEEC
T ss_pred CEEEECCCChH----------HHHHHHHHhccCCEEEEe
Confidence 99986543211 145566799999998865
No 397
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=79.01 E-value=14 Score=32.58 Aligned_cols=113 Identities=11% Similarity=-0.069 Sum_probs=66.1
Q ss_pred CCCEEEEECCC--CC--hhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhh----hhhhc
Q 018352 31 PYVTVCDLYCG--AG--VDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEK 102 (357)
Q Consensus 31 ~~~~VLDlGCG--~G--~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~----~l~~~ 102 (357)
.+.+||=.|++ .| ..+.+.+.....+|+.+|.+....+.+++..+... .+.++.+|+.+..-.. .+...
T Consensus 13 ~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~~ 89 (271)
T 3ek2_A 13 DGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG---SELVFPCDVADDAQIDALFASLKTH 89 (271)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcC---CcEEEECCCCCHHHHHHHHHHHHHH
Confidence 56799999975 44 22333333334589999998665555444433322 4678999998743211 12223
Q ss_pred CCcccEEEEccchhhc-------c--CCHHHHH-----------HHHHHHHhcccCCcEEEEEe
Q 018352 103 ANQADLVCCFQHLQMC-------F--ETEERAR-----------RLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 103 ~~~FDlV~~~~~lh~~-------f--es~~~~~-----------~~L~~i~~~LkpGG~fi~t~ 146 (357)
.+..|+++.+.++... + .+.++.+ .+++.+...++++|.++.+.
T Consensus 90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 153 (271)
T 3ek2_A 90 WDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLS 153 (271)
T ss_dssp CSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred cCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEe
Confidence 4679999887654321 1 2334333 34556666777788887663
No 398
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=78.96 E-value=4.9 Score=38.84 Aligned_cols=60 Identities=5% Similarity=-0.072 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHcCCCCCEEEEECCCCChhHHHHHHh--------cCCeEEEEeCChHHHHHHHHHhHh
Q 018352 17 YEFAKTALIKIYSHPYVTVCDLYCGAGVDVDKWETA--------LIANYIGIDVATSGIGEARDTWEN 76 (357)
Q Consensus 17 ~nwvks~Li~~~~~~~~~VLDlGCG~G~~l~k~~~~--------~~~~v~GiDiS~~~l~~A~~r~~~ 76 (357)
-.|+...+...-.+....|+|+|.|+|..+.-.++. ...+|+.||+|+...+.-++++..
T Consensus 66 a~~~~~~w~~~g~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 133 (387)
T 1zkd_A 66 GLWSASVWKAADEPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAG 133 (387)
T ss_dssp HHHHHHHHHHTTCCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHcCCCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcC
Confidence 356555444333444568999999999876655432 233899999999887765555543
No 399
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=78.63 E-value=4.8 Score=39.65 Aligned_cols=71 Identities=13% Similarity=0.123 Sum_probs=49.4
Q ss_pred CCEEEEECCCC-ChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEEE
Q 018352 32 YVTVCDLYCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (357)
Q Consensus 32 ~~~VLDlGCG~-G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~ 110 (357)
.++|+=+|||. |..+.+.+......|+.+|.+++.++.+.+++ .+..+++|+++....... .-...|+++
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-------~~~~i~Gd~~~~~~L~~A--gi~~ad~~i 73 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-------DLRVVNGHASHPDVLHEA--GAQDADMLV 73 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-------SCEEEESCTTCHHHHHHH--TTTTCSEEE
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-------CcEEEEEcCCCHHHHHhc--CCCcCCEEE
Confidence 47899999986 44444444344458999999999988776654 467799999886543221 236789887
Q ss_pred E
Q 018352 111 C 111 (357)
Q Consensus 111 ~ 111 (357)
+
T Consensus 74 a 74 (461)
T 4g65_A 74 A 74 (461)
T ss_dssp E
T ss_pred E
Confidence 5
No 400
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=78.56 E-value=5.2 Score=41.06 Aligned_cols=120 Identities=15% Similarity=0.306 Sum_probs=67.1
Q ss_pred CCCEEEEECCCCChhHHH-HHHh----------cC--CeEEEEeC---ChHHHHHHHHHhHh-----------cC-----
Q 018352 31 PYVTVCDLYCGAGVDVDK-WETA----------LI--ANYIGIDV---ATSGIGEARDTWEN-----------QR----- 78 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k-~~~~----------~~--~~v~GiDi---S~~~l~~A~~r~~~-----------~~----- 78 (357)
+..+|||+|-|+|-.+.. |... .. -+|++++. +.+.+..+-..+.. -.
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 446999999999965433 2221 11 36999998 88888755432211 00
Q ss_pred --------CCceeEEEEcCCCCCchhhhhhh-cCCcccEEEEccchhhccCCHH----HHHHHHHHHHhcccCCcEEEEE
Q 018352 79 --------KNFIAEFFEADPCAENFETQMQE-KANQADLVCCFQHLQMCFETEE----RARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 79 --------~~~~v~f~~~D~~~~~~~~~l~~-~~~~FDlV~~~~~lh~~fes~~----~~~~~L~~i~~~LkpGG~fi~t 145 (357)
....++...+|+... + ..+.. ....||+|..-. |.... --..+++.+.++++|||.+. +
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~-l-~~~~~~~~~~~d~~~~D~-----f~p~~np~~w~~~~~~~l~~~~~~g~~~~-t 217 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINEL-T-SQLDDSLNQKVDAWFLDG-----FAPAKNPDMWTQNLFNAMARLARPGGTLA-T 217 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHH-G-GGBCGGGTTCEEEEEECC-----SCGGGCGGGSCHHHHHHHHHHEEEEEEEE-E
T ss_pred ceEEEecCCcEEEEEecCCHHHH-H-HhcccccCCcccEEEECC-----CCCcCChhhhhHHHHHHHHHHhCCCCEEE-e
Confidence 012344556665331 1 11110 136799997632 21110 02467899999999999865 3
Q ss_pred eCCchHHHHHHHH
Q 018352 146 TPDSSTIWAKYQK 158 (357)
Q Consensus 146 ~pd~~~i~~~~~~ 158 (357)
......+.+.+.+
T Consensus 218 ~~~~~~vr~~L~~ 230 (676)
T 3ps9_A 218 FTSAGFVRRGLQD 230 (676)
T ss_dssp SCCCHHHHHHHHH
T ss_pred ccCcHHHHHHHHh
Confidence 3344555555544
No 401
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=78.30 E-value=33 Score=30.89 Aligned_cols=113 Identities=12% Similarity=-0.055 Sum_probs=66.3
Q ss_pred CCCEEEEECCC--CC--hhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhh----hhhhc
Q 018352 31 PYVTVCDLYCG--AG--VDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEK 102 (357)
Q Consensus 31 ~~~~VLDlGCG--~G--~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~----~l~~~ 102 (357)
.+.+||=.|++ .| ..+.+.+.....+|+.+|.++...+.+.+...... ++.++.+|+.+..-.. .....
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELG---AFVAGHCDVADAASIDAVFETLEKK 106 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHT---CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC---CceEEECCCCCHHHHHHHHHHHHHh
Confidence 45789999976 33 23333333334589999999765555544443322 5788999998743221 11123
Q ss_pred CCcccEEEEccchhh--------ccCCHHHHH-----------HHHHHHHhcccCCcEEEEEe
Q 018352 103 ANQADLVCCFQHLQM--------CFETEERAR-----------RLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 103 ~~~FDlV~~~~~lh~--------~fes~~~~~-----------~~L~~i~~~LkpGG~fi~t~ 146 (357)
.+..|+++.+.++.. .-.+.++.. .+++.+...++.+|.++.+.
T Consensus 107 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~is 169 (293)
T 3grk_A 107 WGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLT 169 (293)
T ss_dssp TSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred cCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEe
Confidence 467999988765431 011233322 35566667777889888763
No 402
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=78.24 E-value=19 Score=35.30 Aligned_cols=96 Identities=17% Similarity=0.229 Sum_probs=58.4
Q ss_pred CEEEEECCCC-ChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhc-------C-------CCceeEEEEcCCCCCchhh
Q 018352 33 VTVCDLYCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQ-------R-------KNFIAEFFEADPCAENFET 97 (357)
Q Consensus 33 ~~VLDlGCG~-G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~-------~-------~~~~v~f~~~D~~~~~~~~ 97 (357)
.+|.=||+|. |.-+...+......|+++|.+++.++.++++.... + ......+ ..|. ..
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~--~~--- 111 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSST--KE--- 111 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCG--GG---
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCH--HH---
Confidence 4799999997 43333333333348999999999998877643210 0 0001122 2222 01
Q ss_pred hhhhcCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEE
Q 018352 98 QMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLG 144 (357)
Q Consensus 98 ~l~~~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~ 144 (357)
-...|+|+..- .++.+-.+.+++.+...+++|.+++.
T Consensus 112 -----~~~aDlVIeaV-----pe~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 112 -----LSTVDLVVEAV-----FEDMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp -----GTTCSEEEECC-----CSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred -----HCCCCEEEEcC-----CCCHHHHHHHHHHHHhhCCCCeEEEe
Confidence 24689987654 34555567788999999998876654
No 403
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=77.79 E-value=2.9 Score=38.48 Aligned_cols=90 Identities=11% Similarity=-0.016 Sum_probs=56.3
Q ss_pred EEEEECC-C-CChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEEEE
Q 018352 34 TVCDLYC-G-AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVCC 111 (357)
Q Consensus 34 ~VLDlGC-G-~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~~ 111 (357)
+||=.|+ | .|..+..+++....+|+++|.+++-++.+++.-. ...+-..+... . ..+ ..+.+|+|+-
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa------~~vi~~~~~~~--~-~~~--~~~~~d~v~d 217 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGA------NRILSRDEFAE--S-RPL--EKQLWAGAID 217 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTC------SEEEEGGGSSC--C-CSS--CCCCEEEEEE
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC------CEEEecCCHHH--H-Hhh--cCCCccEEEE
Confidence 4999997 3 4556667777655599999999998888866321 11111111110 0 001 2357999875
Q ss_pred ccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 112 FQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 112 ~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
.- .. ..+..+.++|+++|+++..
T Consensus 218 ~~-------g~----~~~~~~~~~l~~~G~iv~~ 240 (324)
T 3nx4_A 218 TV-------GD----KVLAKVLAQMNYGGCVAAC 240 (324)
T ss_dssp SS-------CH----HHHHHHHHTEEEEEEEEEC
T ss_pred CC-------Cc----HHHHHHHHHHhcCCEEEEE
Confidence 33 11 1577888899999999866
No 404
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=77.75 E-value=17 Score=32.04 Aligned_cols=84 Identities=19% Similarity=0.082 Sum_probs=54.4
Q ss_pred CCCEEEEECC-CCC--hhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhh----hhhcC
Q 018352 31 PYVTVCDLYC-GAG--VDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEKA 103 (357)
Q Consensus 31 ~~~~VLDlGC-G~G--~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~----l~~~~ 103 (357)
.+.+||=.|+ |.| ..+.+.+.....+|+.+|.+...++.+.+.++... ..++.++.+|+.+..-... .....
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 99 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLG-LGRVEAVVCDVTSTEAVDALITQTVEKA 99 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC-SSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC-CCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence 3568898887 555 33333333344589999999998888777765432 2368999999987432111 11123
Q ss_pred CcccEEEEccch
Q 018352 104 NQADLVCCFQHL 115 (357)
Q Consensus 104 ~~FDlV~~~~~l 115 (357)
+..|+++.+.++
T Consensus 100 g~id~li~~Ag~ 111 (266)
T 3o38_A 100 GRLDVLVNNAGL 111 (266)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCcEEEECCCc
Confidence 578999887654
No 405
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=77.64 E-value=27 Score=30.94 Aligned_cols=113 Identities=12% Similarity=-0.050 Sum_probs=66.0
Q ss_pred CCCEEEEECCCCC--h-hHHHHHHhcCCeEEEEeC-ChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhh----hhhc
Q 018352 31 PYVTVCDLYCGAG--V-DVDKWETALIANYIGIDV-ATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEK 102 (357)
Q Consensus 31 ~~~~VLDlGCG~G--~-~l~k~~~~~~~~v~GiDi-S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~----l~~~ 102 (357)
.+.++|=.|++.| . .+..+++.+ .+|+.+|. +...++...+..+..+ .++.++.+|+.+..-... ....
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~G-~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 93 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRLG-AKVVVNYANSTKDAEKVVSEIKALG--SDAIAIKADIRQVPEIVKLFDQAVAH 93 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEcCCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3568888888765 1 223333334 48888776 4555665555554432 368899999987432111 1112
Q ss_pred CCcccEEEEccchhhc--c--CCHHHHH-----------HHHHHHHhcccCCcEEEEEe
Q 018352 103 ANQADLVCCFQHLQMC--F--ETEERAR-----------RLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 103 ~~~FDlV~~~~~lh~~--f--es~~~~~-----------~~L~~i~~~LkpGG~fi~t~ 146 (357)
.+..|+++.+.+.... + .+.++.+ .+++.+...++.+|.++.+.
T Consensus 94 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 152 (270)
T 3is3_A 94 FGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTS 152 (270)
T ss_dssp HSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 3578999876554220 0 1333332 35566777788899888763
No 406
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=77.39 E-value=10 Score=33.67 Aligned_cols=84 Identities=17% Similarity=-0.025 Sum_probs=54.1
Q ss_pred CCCEEEEECCCCC--h-hHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCccc
Q 018352 31 PYVTVCDLYCGAG--V-DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (357)
Q Consensus 31 ~~~~VLDlGCG~G--~-~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FD 107 (357)
.+.+||=.|++.| . .+..+++.+ .+|+.+|.+++.++.+.+.+........+.++.+|+.+......+-..-+..|
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id 87 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLVAEG-ANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVD 87 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCC
Confidence 3567888887765 2 223333334 58999999999888777666544323367889999877443222222346799
Q ss_pred EEEEccch
Q 018352 108 LVCCFQHL 115 (357)
Q Consensus 108 lV~~~~~l 115 (357)
+++.+.+.
T Consensus 88 ~lv~nAg~ 95 (267)
T 3t4x_A 88 ILINNLGI 95 (267)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99876653
No 407
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=77.10 E-value=10 Score=34.66 Aligned_cols=109 Identities=14% Similarity=0.008 Sum_probs=69.5
Q ss_pred CCCEEEEECCCCCh---hHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhh----hhhcC
Q 018352 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEKA 103 (357)
Q Consensus 31 ~~~~VLDlGCG~G~---~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~----l~~~~ 103 (357)
.+..+|=-|.+.|- .+..+++.+ .+|+.+|.+++.++.+.+.+.. ++.++++|+.+..-... .....
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~G-a~V~i~~r~~~~l~~~~~~~g~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~ 101 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAEG-ARVFITGRRKDVLDAAIAEIGG-----GAVGIQADSANLAELDRLYEKVKAEA 101 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHCT-----TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHcCC-----CeEEEEecCCCHHHHHHHHHHHHHHc
Confidence 46788888988772 233343334 5999999999999877666532 56788999987542221 12234
Q ss_pred CcccEEEEccchhhc--c--CCHHHHH-----------HHHHHHHhcccCCcEEEEE
Q 018352 104 NQADLVCCFQHLQMC--F--ETEERAR-----------RLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 104 ~~FDlV~~~~~lh~~--f--es~~~~~-----------~~L~~i~~~LkpGG~fi~t 145 (357)
+..|+++.+.+.... | -+.++.+ .+.+.+...|+.+|.++.+
T Consensus 102 G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IIni 158 (273)
T 4fgs_A 102 GRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLT 158 (273)
T ss_dssp SCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEE
T ss_pred CCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEE
Confidence 789998876654321 1 1233332 3566777788888887766
No 408
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=76.61 E-value=24 Score=30.72 Aligned_cols=114 Identities=10% Similarity=0.065 Sum_probs=65.2
Q ss_pred CCCEEEEECCCCC--hhH-HHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhh----hhhcC
Q 018352 31 PYVTVCDLYCGAG--VDV-DKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEKA 103 (357)
Q Consensus 31 ~~~~VLDlGCG~G--~~l-~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~----l~~~~ 103 (357)
.+.+||=.|++.| ..+ ..+++....+|++++.+...++.+.+.+.... .++.++.+|+.+..-... +....
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 80 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG--LSPRFHQLDIDDLQSIRALRDFLRKEY 80 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC--CeeEEEECCCCCHHHHHHHHHHHHHhc
Confidence 3567887775543 222 23333144589999999887777666655432 257889999977432111 11122
Q ss_pred CcccEEEEccchhhc--c-CC-HHHH-----------HHHHHHHHhcccCCcEEEEEe
Q 018352 104 NQADLVCCFQHLQMC--F-ET-EERA-----------RRLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 104 ~~FDlV~~~~~lh~~--f-es-~~~~-----------~~~L~~i~~~LkpGG~fi~t~ 146 (357)
+.+|+|+.+.+.... . .. .++. ..+++.+...++++|.++.+.
T Consensus 81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~s 138 (276)
T 1wma_A 81 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVS 138 (276)
T ss_dssp SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEEC
Confidence 479999876543210 0 01 1222 235566667777778877664
No 409
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=75.97 E-value=13 Score=33.22 Aligned_cols=126 Identities=10% Similarity=-0.009 Sum_probs=65.8
Q ss_pred HHHHHHHHHHcCCCCCEEEEECCCCCh---hHHHHHHhcCCeEEEE-eCChHHHHHHHHHhHhcCCCceeEEEEcCCCCC
Q 018352 18 EFAKTALIKIYSHPYVTVCDLYCGAGV---DVDKWETALIANYIGI-DVATSGIGEARDTWENQRKNFIAEFFEADPCAE 93 (357)
Q Consensus 18 nwvks~Li~~~~~~~~~VLDlGCG~G~---~l~k~~~~~~~~v~Gi-DiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~ 93 (357)
+|-++...+.....+.++|=.|++.|- .+..+++.+. +|+.+ +-+...++...+..+... .++.++.+|+.+.
T Consensus 13 ~~~~~~~~~~m~~~~k~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~ 89 (267)
T 3u5t_A 13 LGTENLYFQSMMETNKVAIVTGASRGIGAAIAARLASDGF-TVVINYAGKAAAAEEVAGKIEAAG--GKALTAQADVSDP 89 (267)
T ss_dssp --------------CCEEEEESCSSHHHHHHHHHHHHHTC-EEEEEESSCSHHHHHHHHHHHHTT--CCEEEEECCTTCH
T ss_pred cccccccccccccCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCH
Confidence 444444444444457789999987762 2334444454 77776 455666666555554432 2678899999874
Q ss_pred chhhh----hhhcCCcccEEEEccchhhc----cCCHHHHH-----------HHHHHHHhcccCCcEEEEEe
Q 018352 94 NFETQ----MQEKANQADLVCCFQHLQMC----FETEERAR-----------RLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 94 ~~~~~----l~~~~~~FDlV~~~~~lh~~----fes~~~~~-----------~~L~~i~~~LkpGG~fi~t~ 146 (357)
.-... .....+..|+++.+.++... -.+.++.+ .+++.+...++.+|.++.+.
T Consensus 90 ~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 161 (267)
T 3u5t_A 90 AAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMS 161 (267)
T ss_dssp HHHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 32111 11123579999887654320 01233222 35566677777888888764
No 410
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=75.56 E-value=9 Score=36.09 Aligned_cols=98 Identities=12% Similarity=-0.025 Sum_probs=58.3
Q ss_pred CCCCCEEEEEC-CC-CChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcc
Q 018352 29 SHPYVTVCDLY-CG-AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQA 106 (357)
Q Consensus 29 ~~~~~~VLDlG-CG-~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~F 106 (357)
..++.+||=.| || -|..+..+++....+|++++ +++-++.+++. +. . ..+ |....++...+.. ...+
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~l----Ga--~-~v~--~~~~~~~~~~~~~-~~g~ 249 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRKL----GA--D-DVI--DYKSGSVEEQLKS-LKPF 249 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHT----TC--S-EEE--ETTSSCHHHHHHT-SCCB
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHHc----CC--C-EEE--ECCchHHHHHHhh-cCCC
Confidence 45788999999 45 35555666666455899998 77666665322 11 1 112 3333333333322 2579
Q ss_pred cEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEe
Q 018352 107 DLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 107 DlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~ 146 (357)
|+|+..-+-.. ..+....++|++||+++...
T Consensus 250 D~vid~~g~~~---------~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 250 DFILDNVGGST---------ETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp SEEEESSCTTH---------HHHGGGGBCSSSCCEEEESC
T ss_pred CEEEECCCChh---------hhhHHHHHhhcCCcEEEEeC
Confidence 99986543211 13466678999999998763
No 411
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=75.41 E-value=34 Score=30.01 Aligned_cols=83 Identities=8% Similarity=-0.029 Sum_probs=49.9
Q ss_pred CCEEEEECCCCC--hhH-HHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhh----hhhcCC
Q 018352 32 YVTVCDLYCGAG--VDV-DKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEKAN 104 (357)
Q Consensus 32 ~~~VLDlGCG~G--~~l-~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~----l~~~~~ 104 (357)
+.+||=.|++.| ..+ ..+++.+ .+|+++|.+++.++.+.+.........++.++.+|+.+..-... .....+
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (267)
T 2gdz_A 7 GKVALVTGAAQGIGRAFAEALLLKG-AKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG 85 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence 467888887665 222 3333334 58999999988776655554322112257889999987432111 111225
Q ss_pred cccEEEEccch
Q 018352 105 QADLVCCFQHL 115 (357)
Q Consensus 105 ~FDlV~~~~~l 115 (357)
..|+++.+.+.
T Consensus 86 ~id~lv~~Ag~ 96 (267)
T 2gdz_A 86 RLDILVNNAGV 96 (267)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999887654
No 412
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=75.39 E-value=39 Score=29.80 Aligned_cols=113 Identities=13% Similarity=0.057 Sum_probs=67.8
Q ss_pred CCCEEEEECCCC--C--hhH-HHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhh----hhhh
Q 018352 31 PYVTVCDLYCGA--G--VDV-DKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQE 101 (357)
Q Consensus 31 ~~~~VLDlGCG~--G--~~l-~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~----~l~~ 101 (357)
.+.++|=-|++. | ..+ ..+++.+ .+|+.+|.+++.++.+.+..+... ..++.++++|+.+..-.. ....
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~G-a~Vvi~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLG-AKLVFTYRKERSRKELEKLLEQLN-QPEAHLYQIDVQSDEEVINGFEQIGK 82 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTT-CEEEEEESSGGGHHHHHHHHGGGT-CSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcC-CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 467888888532 4 333 3344444 599999999999988877766532 226788999998743211 1112
Q ss_pred cCCcccEEEEccchhh------cc--CCHHHHH-----------HHHHHHHhcccCCcEEEEE
Q 018352 102 KANQADLVCCFQHLQM------CF--ETEERAR-----------RLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 102 ~~~~FDlV~~~~~lh~------~f--es~~~~~-----------~~L~~i~~~LkpGG~fi~t 145 (357)
.-+..|+++.+.++.. .+ .+.++.. .+.+.+...++.||.++.+
T Consensus 83 ~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVni 145 (256)
T 4fs3_A 83 DVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVAT 145 (256)
T ss_dssp HHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEE
T ss_pred HhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEE
Confidence 3478999887654211 01 1223222 1234455677889998866
No 413
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=75.18 E-value=11 Score=34.70 Aligned_cols=92 Identities=11% Similarity=-0.013 Sum_probs=56.1
Q ss_pred CCCCCEEEEEC-CCC-ChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCc-hhhhhhhcCCc
Q 018352 29 SHPYVTVCDLY-CGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAEN-FETQMQEKANQ 105 (357)
Q Consensus 29 ~~~~~~VLDlG-CG~-G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~-~~~~l~~~~~~ 105 (357)
+.++.+||=+| +|. |..+..+++....++++++ +++.++.+++. +. . .. .|....+ +.. .-..
T Consensus 150 ~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~l----Ga--~-~~--i~~~~~~~~~~----~~~g 215 (321)
T 3tqh_A 150 VKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKAL----GA--E-QC--INYHEEDFLLA----ISTP 215 (321)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHHHH----TC--S-EE--EETTTSCHHHH----CCSC
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHHHc----CC--C-EE--EeCCCcchhhh----hccC
Confidence 45889999996 553 5566667666555899997 55556665542 11 1 11 2322322 322 2257
Q ss_pred ccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 106 ADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 106 FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
+|+|+..-+ .+ .+....++|++||+++..
T Consensus 216 ~D~v~d~~g-------~~----~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 216 VDAVIDLVG-------GD----VGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp EEEEEESSC-------HH----HHHHHGGGEEEEEEEEEC
T ss_pred CCEEEECCC-------cH----HHHHHHHhccCCCEEEEe
Confidence 999876432 11 136678999999999876
No 414
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=74.85 E-value=3.2 Score=45.09 Aligned_cols=54 Identities=19% Similarity=0.205 Sum_probs=41.6
Q ss_pred CCCEEEEECCCCChhHHHHHHhcC-CeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCC
Q 018352 31 PYVTVCDLYCGAGVDVDKWETALI-ANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADP 90 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~~~-~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~ 90 (357)
...+++||-||.||...-+..+++ ..+.++|+++.+++.-+.++. ...++..|+
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~p------~~~~~~~DI 593 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNP------GSTVFTEDC 593 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHCT------TSEEECSCH
T ss_pred CCCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC------CCccccccH
Confidence 346899999999999999988887 568899999998876555543 234566664
No 415
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=74.66 E-value=23 Score=31.43 Aligned_cols=83 Identities=11% Similarity=-0.012 Sum_probs=52.1
Q ss_pred CCCEEEEECCCCC--h-hHHHHHHhcCCeEEEEeCC------------hHHHHHHHHHhHhcCCCceeEEEEcCCCCCch
Q 018352 31 PYVTVCDLYCGAG--V-DVDKWETALIANYIGIDVA------------TSGIGEARDTWENQRKNFIAEFFEADPCAENF 95 (357)
Q Consensus 31 ~~~~VLDlGCG~G--~-~l~k~~~~~~~~v~GiDiS------------~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~ 95 (357)
.+.+||=.|++.| . .+..+++ ...+|+++|.+ .+.++...+...... .++.++.+|+.+..-
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~ 88 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAA-DGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG--SRIVARQADVRDRES 88 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHH-TTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT--CCEEEEECCTTCHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-CCCeEEEEecccccccccccccchHHHHHHHHHHHhcC--CeEEEEeCCCCCHHH
Confidence 4578998998765 2 2233333 44589999987 666666655554432 268899999987442
Q ss_pred hhh----hhhcCCcccEEEEccchh
Q 018352 96 ETQ----MQEKANQADLVCCFQHLQ 116 (357)
Q Consensus 96 ~~~----l~~~~~~FDlV~~~~~lh 116 (357)
... .....+..|+++.+.++.
T Consensus 89 v~~~~~~~~~~~g~id~lv~nAg~~ 113 (278)
T 3sx2_A 89 LSAALQAGLDELGRLDIVVANAGIA 113 (278)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCC
Confidence 111 111235799999877654
No 416
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=74.45 E-value=35 Score=29.91 Aligned_cols=79 Identities=13% Similarity=-0.030 Sum_probs=50.9
Q ss_pred CCCEEEEECCCCC--h-hHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhh----hhhhcC
Q 018352 31 PYVTVCDLYCGAG--V-DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKA 103 (357)
Q Consensus 31 ~~~~VLDlGCG~G--~-~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~----~l~~~~ 103 (357)
.+.+||=.|++.| . .+..+++.+ .+|+.+|.+.+.++...+.... ++.++.+|+.+..-.. ......
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~~~ 80 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREG-ATVAIADIDIERARQAAAEIGP-----AAYAVQMDVTRQDSIDAAIAATVEHA 80 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHCT-----TEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHhCC-----CceEEEeeCCCHHHHHHHHHHHHHHc
Confidence 3568888897765 1 223333334 5899999999887776655522 5788999998743211 111234
Q ss_pred CcccEEEEccch
Q 018352 104 NQADLVCCFQHL 115 (357)
Q Consensus 104 ~~FDlV~~~~~l 115 (357)
+..|+++.+.+.
T Consensus 81 g~id~lv~~Ag~ 92 (259)
T 4e6p_A 81 GGLDILVNNAAL 92 (259)
T ss_dssp SSCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 579999887654
No 417
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=74.34 E-value=57 Score=30.51 Aligned_cols=191 Identities=14% Similarity=0.127 Sum_probs=104.1
Q ss_pred CcchHHHHHHHHHHHHHHHc----C---CCCCEEEEECCCCChhHHHHHHh--cCCeEEEEeCChHHHHHHHHHhHhcC-
Q 018352 9 SELTHHRLYEFAKTALIKIY----S---HPYVTVCDLYCGAGVDVDKWETA--LIANYIGIDVATSGIGEARDTWENQR- 78 (357)
Q Consensus 9 ~~~p~~~~~nwvks~Li~~~----~---~~~~~VLDlGCG~G~~l~k~~~~--~~~~v~GiDiS~~~l~~A~~r~~~~~- 78 (357)
..+|.....-|++...|... + ++...|+-||||-=.-...+... ....++=||.-+ .++.=++.+....
T Consensus 61 rr~P~inrG~~~Rt~~iD~~v~~fl~~~~~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~P~-vi~~K~~~l~~~~~ 139 (334)
T 3iei_A 61 RKAPEINRGYFARVHGVSQLIKAFLRKTECHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDFPM-IVTRKLHSIKCKPP 139 (334)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHTTTCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEECHH-HHHHHHHHHHHCHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCcHH-HHHHHHHHHhhchh
Confidence 34554444445554444333 2 24579999999974333333322 234677777743 3332222222100
Q ss_pred ---------------------CCceeEEEEcCCCCCc-hhhhhhh---cCCcccEEEEccchhhccCCHHHHHHHHHHHH
Q 018352 79 ---------------------KNFIAEFFEADPCAEN-FETQMQE---KANQADLVCCFQHLQMCFETEERARRLLQNVS 133 (357)
Q Consensus 79 ---------------------~~~~v~f~~~D~~~~~-~~~~l~~---~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~ 133 (357)
...+..++.+|+.+.. +...+.. ....--++++-.++.| + +.+...++|+.+.
T Consensus 140 l~~~lg~~~~~~~~~~~~~~l~s~~y~~v~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~Y-L-~~~~~~~ll~~ia 217 (334)
T 3iei_A 140 LSSPILELHSEDTLQMDGHILDSKRYAVIGADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVY-M-TPEQSANLLKWAA 217 (334)
T ss_dssp HHHHHHHHSSSSSCBCCTTEEECSSEEEEECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGG-S-CHHHHHHHHHHHH
T ss_pred hhhhhcccccccccccccccCCCCceEEEccccccchhHHHHHHhcCCCCCCCEEEEEchhhhC-C-CHHHHHHHHHHHH
Confidence 0235678999987642 2222221 1244557888888999 6 6888999999999
Q ss_pred hcccCCcEEEEEeCCc-hHHHHHHHHhHHhhhcCCCCCCCCCCCCccCCccEEEEeecccCCCCccceeeEeEEcCCccc
Q 018352 134 SLLKPGGYFLGITPDS-STIWAKYQKNVEAYHNRSSSMKPNLVPNCIRSESYVITFEVEEEKFPLFGKKYQLKFANDISA 212 (357)
Q Consensus 134 ~~LkpGG~fi~t~pd~-~~i~~~~~~~~~~~~~~~~~~~~~~fgn~i~~~~y~i~f~~~~~~~p~fG~~Y~f~L~~~~~~ 212 (357)
+...+|..++.-..+. +..-+.+.++.. ..| .|..|. ..
T Consensus 218 ~~f~~~~~i~yE~i~p~d~fg~~M~~~l~---~~g---------------------------~pl~sl----------~~ 257 (334)
T 3iei_A 218 NSFERAMFINYEQVNMGDRFGQIMIENLR---RRQ---------------------------CDLAGV----------ET 257 (334)
T ss_dssp HHCSSEEEEEEEECCTTSHHHHHHHHHHH---TTT---------------------------CCCTTG----------GG
T ss_pred HhCCCceEEEEeccCCCCHHHHHHHHHHH---HhC---------------------------CCCccc----------cc
Confidence 9875544443333222 222222222211 011 111221 01
Q ss_pred CcccccchHHHHHHHHHcCCEEEEecCchHHHHh
Q 018352 213 ETQCLVHFPSLIRLAREAGLEYVEIQNLNEFYDD 246 (357)
Q Consensus 213 ~~eylv~~~~l~~la~e~Glelv~~~~f~~f~~~ 246 (357)
| -..+...+.+.++|++.+...+..++|+.
T Consensus 258 ---y-~t~~~~~~r~~~~Gw~~~~~~d~~~~~~~ 287 (334)
T 3iei_A 258 ---C-KSLESQKERLLSNGWETASAVDMMELYNR 287 (334)
T ss_dssp ---G-GCHHHHHHHHHTTTCSEEEEEEHHHHHHT
T ss_pred ---C-CCHHHHHHHHHHcCCCcceeecHHHHHHh
Confidence 1 25566778889999999999999999953
No 418
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=73.90 E-value=20 Score=32.66 Aligned_cols=91 Identities=18% Similarity=0.139 Sum_probs=54.5
Q ss_pred CCEEEEECCCC-ChhH-HHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEE
Q 018352 32 YVTVCDLYCGA-GVDV-DKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 32 ~~~VLDlGCG~-G~~l-~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
..+|.=||+|. |..+ ..+...+ .+|++.|.+++.++.+.+. +. .....+..+ .-...|+|
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G-~~V~~~dr~~~~~~~~~~~----g~----~~~~~~~~e---------~~~~aDvv 68 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAG-LSTWGADLNPQACANLLAE----GA----CGAAASARE---------FAGVVDAL 68 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSCHHHHHHHHHT----TC----SEEESSSTT---------TTTTCSEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC-CeEEEEECCHHHHHHHHHc----CC----ccccCCHHH---------HHhcCCEE
Confidence 35788999996 3333 3344444 4899999999887766543 11 111222211 12457998
Q ss_pred EEccchhhccCCHHHHHHHH---HHHHhcccCCcEEEEEe
Q 018352 110 CCFQHLQMCFETEERARRLL---QNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 110 ~~~~~lh~~fes~~~~~~~L---~~i~~~LkpGG~fi~t~ 146 (357)
+..- .+....+.++ +.+...|++|..++-+.
T Consensus 69 i~~v------p~~~~~~~v~~~~~~l~~~l~~g~ivv~~s 102 (303)
T 3g0o_A 69 VILV------VNAAQVRQVLFGEDGVAHLMKPGSAVMVSS 102 (303)
T ss_dssp EECC------SSHHHHHHHHC--CCCGGGSCTTCEEEECS
T ss_pred EEEC------CCHHHHHHHHhChhhHHhhCCCCCEEEecC
Confidence 7643 2333455565 66778888988776553
No 419
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=73.90 E-value=32 Score=30.74 Aligned_cols=79 Identities=11% Similarity=-0.008 Sum_probs=51.2
Q ss_pred CCCEEEEECCCCCh---hHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhh----hhhcC
Q 018352 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEKA 103 (357)
Q Consensus 31 ~~~~VLDlGCG~G~---~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~----l~~~~ 103 (357)
.+.+||=.|++.|- .+..+++.+ .+|+++|.+++.++.+.+.+. .++.++.+|+.+..-... .....
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADEG-CHVLCADIDGDAADAAATKIG-----CGAAACRVDVSDEQQIIAMVDACVAAF 101 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHHC-----SSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHcC-----CcceEEEecCCCHHHHHHHHHHHHHHc
Confidence 35688888887762 223343444 499999999988877666552 257889999987532111 11123
Q ss_pred CcccEEEEccch
Q 018352 104 NQADLVCCFQHL 115 (357)
Q Consensus 104 ~~FDlV~~~~~l 115 (357)
+..|+++.+.+.
T Consensus 102 g~iD~lvnnAg~ 113 (277)
T 3gvc_A 102 GGVDKLVANAGV 113 (277)
T ss_dssp SSCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 579999887654
No 420
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=73.37 E-value=7.6 Score=35.21 Aligned_cols=95 Identities=18% Similarity=0.143 Sum_probs=58.6
Q ss_pred CEEEEECCCC-Ch-hHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhc-------C--CC--------ceeEEEEcCCCCC
Q 018352 33 VTVCDLYCGA-GV-DVDKWETALIANYIGIDVATSGIGEARDTWENQ-------R--KN--------FIAEFFEADPCAE 93 (357)
Q Consensus 33 ~~VLDlGCG~-G~-~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~-------~--~~--------~~v~f~~~D~~~~ 93 (357)
.+|.=||+|. |. .+..++..+. +|+++|.+++.++.+.++.... . .. .++.+ ..|
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~---- 78 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDD---- 78 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESC----
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCC----
Confidence 4788889986 33 3333444454 8999999999999887764221 0 00 01111 111
Q ss_pred chhhhhhhcCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEE
Q 018352 94 NFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFL 143 (357)
Q Consensus 94 ~~~~~l~~~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi 143 (357)
+.+ .-...|+|+..- .++.+..+.+++++...++++.+++
T Consensus 79 -~~~----~~~~aDlVi~av-----~~~~~~~~~v~~~l~~~~~~~~il~ 118 (283)
T 4e12_A 79 -LAQ----AVKDADLVIEAV-----PESLDLKRDIYTKLGELAPAKTIFA 118 (283)
T ss_dssp -HHH----HTTTCSEEEECC-----CSCHHHHHHHHHHHHHHSCTTCEEE
T ss_pred -HHH----HhccCCEEEEec-----cCcHHHHHHHHHHHHhhCCCCcEEE
Confidence 111 125689987653 4455667788999999999987665
No 421
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=73.29 E-value=44 Score=29.37 Aligned_cols=84 Identities=14% Similarity=0.006 Sum_probs=51.7
Q ss_pred CCCEEEEECCCCC--hh-HHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhh----hhhcC
Q 018352 31 PYVTVCDLYCGAG--VD-VDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEKA 103 (357)
Q Consensus 31 ~~~~VLDlGCG~G--~~-l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~----l~~~~ 103 (357)
.+.+||=.|++.| .. +..+++ ...+|+++|.+++.++.+.+.+.......++.++.+|+.+..-... .....
T Consensus 12 ~~k~vlVTGas~gIG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 90 (267)
T 1iy8_A 12 TDRVVLITGGGSGLGRATAVRLAA-EGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF 90 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 3568898898765 22 233333 3458999999998887766555432112267889999987432111 11123
Q ss_pred CcccEEEEccch
Q 018352 104 NQADLVCCFQHL 115 (357)
Q Consensus 104 ~~FDlV~~~~~l 115 (357)
+..|+++.+.+.
T Consensus 91 g~id~lv~nAg~ 102 (267)
T 1iy8_A 91 GRIDGFFNNAGI 102 (267)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 578999887654
No 422
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=73.24 E-value=2.7 Score=38.85 Aligned_cols=95 Identities=13% Similarity=-0.111 Sum_probs=55.9
Q ss_pred CCCCC-EEEEECC-C-CChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCC--chhhhhhhcC
Q 018352 29 SHPYV-TVCDLYC-G-AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAE--NFETQMQEKA 103 (357)
Q Consensus 29 ~~~~~-~VLDlGC-G-~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~--~~~~~l~~~~ 103 (357)
+.++. +||-+|+ | -|..+..+++....+++++|.+++-++.+++. . . . ..+ |.... .....+ ..
T Consensus 146 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~l-G---a--~-~~i--~~~~~~~~~~~~~--~~ 214 (328)
T 1xa0_A 146 LTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVL-G---A--K-EVL--AREDVMAERIRPL--DK 214 (328)
T ss_dssp CCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHT-T---C--S-EEE--ECC---------C--CS
T ss_pred CCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc-C---C--c-EEE--ecCCcHHHHHHHh--cC
Confidence 44564 8999998 3 35556666666555899999998888777542 1 1 1 111 11111 000001 12
Q ss_pred CcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 104 NQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 104 ~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
+.+|+|+...+- ..+..+.++|++||+++..
T Consensus 215 ~~~d~vid~~g~-----------~~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 215 QRWAAAVDPVGG-----------RTLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp CCEEEEEECSTT-----------TTHHHHHHTEEEEEEEEEC
T ss_pred CcccEEEECCcH-----------HHHHHHHHhhccCCEEEEE
Confidence 469998765421 1256677899999998865
No 423
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=72.82 E-value=43 Score=28.94 Aligned_cols=78 Identities=10% Similarity=-0.115 Sum_probs=50.2
Q ss_pred CCEEEEECCCCC--hh-HHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhh----hhhhcCC
Q 018352 32 YVTVCDLYCGAG--VD-VDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKAN 104 (357)
Q Consensus 32 ~~~VLDlGCG~G--~~-l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~----~l~~~~~ 104 (357)
+.+||=.|++.| .. +..+++.+ .+|+.+|.+++.++...+.... ++.++.+|+.+..-.. ......+
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~~~g 76 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERG-HQVSMMGRRYQRLQQQELLLGN-----AVIGIVADLAHHEDVDVAFAAAVEWGG 76 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHGG-----GEEEEECCTTSHHHHHHHHHHHHHHHC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHhcC-----CceEEECCCCCHHHHHHHHHHHHHhcC
Confidence 357888887765 22 23333334 5899999999988877666532 4889999998743211 1111235
Q ss_pred cccEEEEccch
Q 018352 105 QADLVCCFQHL 115 (357)
Q Consensus 105 ~FDlV~~~~~l 115 (357)
..|+++.+.++
T Consensus 77 ~id~lvnnAg~ 87 (235)
T 3l6e_A 77 LPELVLHCAGT 87 (235)
T ss_dssp SCSEEEEECCC
T ss_pred CCcEEEECCCC
Confidence 78999876654
No 424
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=72.76 E-value=3.6 Score=43.15 Aligned_cols=45 Identities=16% Similarity=0.145 Sum_probs=36.3
Q ss_pred CCCEEEEECCCCChhHHHHHHhc------CCeEEEEeCChHHHHHHHHHhH
Q 018352 31 PYVTVCDLYCGAGVDVDKWETAL------IANYIGIDVATSGIGEARDTWE 75 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~~------~~~v~GiDiS~~~l~~A~~r~~ 75 (357)
+..+|+||-||.||...-+..++ +.-+.++|+++.+++.-+.++.
T Consensus 211 k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp 261 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHP 261 (784)
T ss_dssp EEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHCT
T ss_pred CCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHCC
Confidence 34689999999999998887765 5568899999998877666653
No 425
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=72.60 E-value=24 Score=31.17 Aligned_cols=82 Identities=9% Similarity=-0.049 Sum_probs=54.6
Q ss_pred CCCEEEEECCCCCh---hHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhh----hhhhcC
Q 018352 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKA 103 (357)
Q Consensus 31 ~~~~VLDlGCG~G~---~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~----~l~~~~ 103 (357)
.+.+||=.|++.|- .+..+++.+ .+|+.+|.+.+.++.+.+.+.... .++.++.+|+.+..-.. ......
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQG-ADLVLAARTVERLEDVAKQVTDTG--RRALSVGTDITDDAQVAHLVDETMKAY 86 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCc-CEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 35789999987762 223333344 589999999998888777765542 36889999998754211 111234
Q ss_pred CcccEEEEccch
Q 018352 104 NQADLVCCFQHL 115 (357)
Q Consensus 104 ~~FDlV~~~~~l 115 (357)
+..|+++.+.+.
T Consensus 87 g~id~lv~nAg~ 98 (264)
T 3ucx_A 87 GRVDVVINNAFR 98 (264)
T ss_dssp SCCSEEEECCCS
T ss_pred CCCcEEEECCCC
Confidence 679999876643
No 426
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=72.59 E-value=30 Score=30.48 Aligned_cols=84 Identities=8% Similarity=-0.140 Sum_probs=54.2
Q ss_pred CCCEEEEECCCCC--h-hHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhh----hhhhcC
Q 018352 31 PYVTVCDLYCGAG--V-DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKA 103 (357)
Q Consensus 31 ~~~~VLDlGCG~G--~-~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~----~l~~~~ 103 (357)
.+.+||=.|++.| . .+..+++.+ .+|+.+|.+++.++.+.+.+.......++.++.+|+.+..-.. ......
T Consensus 7 ~~k~~lVTGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (265)
T 3lf2_A 7 SEAVAVVTGGSSGIGLATVELLLEAG-AAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL 85 (265)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 4578898898776 2 223333344 4899999999988887776654222225888999998743211 111123
Q ss_pred CcccEEEEccch
Q 018352 104 NQADLVCCFQHL 115 (357)
Q Consensus 104 ~~FDlV~~~~~l 115 (357)
+..|+++.+.+.
T Consensus 86 g~id~lvnnAg~ 97 (265)
T 3lf2_A 86 GCASILVNNAGQ 97 (265)
T ss_dssp CSCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 578999887654
No 427
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=72.50 E-value=2.4 Score=39.60 Aligned_cols=64 Identities=14% Similarity=0.167 Sum_probs=42.5
Q ss_pred eeEEEEcCCCCCchhhhhhhcCCcccEEEEccchhhc----cCC------HHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 82 IAEFFEADPCAENFETQMQEKANQADLVCCFQHLQMC----FET------EERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 82 ~v~f~~~D~~~~~~~~~l~~~~~~FDlV~~~~~lh~~----fes------~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
...++++|+... + ..+ ++++||+|++.--.... +.+ .......+++++++|+|||.+++.+.+.
T Consensus 14 ~~~ii~gD~~~~-l-~~l--~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~ 87 (323)
T 1boo_A 14 NGSMYIGDSLEL-L-ESF--PEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGA 87 (323)
T ss_dssp SEEEEESCHHHH-G-GGS--CSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred CceEEeCcHHHH-H-hhC--CCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCE
Confidence 467888887541 1 112 35789999986432210 000 2346788999999999999999987765
No 428
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=72.33 E-value=49 Score=31.26 Aligned_cols=112 Identities=11% Similarity=-0.001 Sum_probs=69.9
Q ss_pred HHHHHHHcCC--CCCEEEEECCCCChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCc-eeEEEEcCCCCCchhh
Q 018352 21 KTALIKIYSH--PYVTVCDLYCGAGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNF-IAEFFEADPCAENFET 97 (357)
Q Consensus 21 ks~Li~~~~~--~~~~VLDlGCG~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~-~v~f~~~D~~~~~~~~ 97 (357)
...||+.... .+.+||.++.+-|..+..+... .++.+.=|-.+-...+...+.++... .+.+... .. .
T Consensus 26 d~~ll~~~~~~~~~~~~~~~~d~~gal~~~~~~~---~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~--~~-~--- 96 (375)
T 4dcm_A 26 DEYLLQQLDDTEIRGPVLILNDAFGALSCALAEH---KPYSIGDSYISELATRENLRLNGIDESSVKFLDS--TA-D--- 96 (375)
T ss_dssp HHHHHHTTTTCCCCSCEEEECCSSSHHHHHTGGG---CCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEET--TS-C---
T ss_pred HHHHHHhhhhccCCCCEEEECCCCCHHHHhhccC---CceEEEhHHHHHHHHHHHHHHcCCCccceEeccc--cc-c---
Confidence 4455655433 4568999999999665554322 34555335554444445555443321 2444322 11 1
Q ss_pred hhhhcCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCch
Q 018352 98 QMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSS 150 (357)
Q Consensus 98 ~l~~~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~ 150 (357)
....||+|+... -.+.......|..+...|++|+.+++..-+..
T Consensus 97 ----~~~~~~~v~~~l-----pk~~~~l~~~L~~l~~~l~~~~~i~~~g~~~~ 140 (375)
T 4dcm_A 97 ----YPQQPGVVLIKV-----PKTLALLEQQLRALRKVVTSDTRIIAGAKARD 140 (375)
T ss_dssp ----CCSSCSEEEEEC-----CSCHHHHHHHHHHHHTTCCTTSEEEEEEEGGG
T ss_pred ----cccCCCEEEEEc-----CCCHHHHHHHHHHHHhhCCCCCEEEEEecccc
Confidence 246899997754 34567788899999999999999988765543
No 429
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=72.29 E-value=32 Score=29.86 Aligned_cols=82 Identities=9% Similarity=-0.053 Sum_probs=54.2
Q ss_pred CCCEEEEECCCCC--hh-HHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhh----hhhcC
Q 018352 31 PYVTVCDLYCGAG--VD-VDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEKA 103 (357)
Q Consensus 31 ~~~~VLDlGCG~G--~~-l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~----l~~~~ 103 (357)
.+.+||=.|++.| .. +..+++.+ .+|+.+|.+++.++.+.+.+.... .++.++.+|+.+..-... .....
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREG-AAVVVADINAEAAEAVAKQIVADG--GTAISVAVDVSDPESAKAMADRTLAEF 84 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4578898998765 22 33333344 589999999999888777765542 368899999987432111 11123
Q ss_pred CcccEEEEccch
Q 018352 104 NQADLVCCFQHL 115 (357)
Q Consensus 104 ~~FDlV~~~~~l 115 (357)
+..|+++.+.++
T Consensus 85 g~id~li~~Ag~ 96 (253)
T 3qiv_A 85 GGIDYLVNNAAI 96 (253)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 579999887654
No 430
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=72.09 E-value=45 Score=29.43 Aligned_cols=84 Identities=11% Similarity=-0.027 Sum_probs=51.5
Q ss_pred CCEEEEECCCCC--hhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhh----hhhcCCc
Q 018352 32 YVTVCDLYCGAG--VDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEKANQ 105 (357)
Q Consensus 32 ~~~VLDlGCG~G--~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~----l~~~~~~ 105 (357)
+.+||=.|++.| ..+.+.+.....+|++++.++..++...+.++......++.++.+|+.+..-... +....+.
T Consensus 32 ~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 111 (279)
T 1xg5_A 32 DRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSG 111 (279)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 568888887654 2222222233458999999988887766665543322367889999987432111 1112247
Q ss_pred ccEEEEccch
Q 018352 106 ADLVCCFQHL 115 (357)
Q Consensus 106 FDlV~~~~~l 115 (357)
+|+|+.+.+.
T Consensus 112 iD~vi~~Ag~ 121 (279)
T 1xg5_A 112 VDICINNAGL 121 (279)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999876653
No 431
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=71.75 E-value=43 Score=29.87 Aligned_cols=82 Identities=7% Similarity=-0.036 Sum_probs=51.3
Q ss_pred CCCEEEEECCCCC--hh-HHHHHHhcCCeEEEEeC-ChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhh----hhhc
Q 018352 31 PYVTVCDLYCGAG--VD-VDKWETALIANYIGIDV-ATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEK 102 (357)
Q Consensus 31 ~~~~VLDlGCG~G--~~-l~k~~~~~~~~v~GiDi-S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~----l~~~ 102 (357)
.+.+||=.|++.| .. +..+++ ...+|+.+|. +++.++...+.+...+ .++.++.+|+.+..-... ....
T Consensus 28 ~~k~~lVTGas~GIG~aia~~la~-~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 104 (280)
T 4da9_A 28 ARPVAIVTGGRRGIGLGIARALAA-SGFDIAITGIGDAEGVAPVIAELSGLG--ARVIFLRADLADLSSHQATVDAVVAE 104 (280)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEESCCHHHHHHHHHHHHHTT--CCEEEEECCTTSGGGHHHHHHHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 4568898898766 22 233333 4458999996 7777776666555432 368899999987542211 1112
Q ss_pred CCcccEEEEccch
Q 018352 103 ANQADLVCCFQHL 115 (357)
Q Consensus 103 ~~~FDlV~~~~~l 115 (357)
.+..|+++.+.++
T Consensus 105 ~g~iD~lvnnAg~ 117 (280)
T 4da9_A 105 FGRIDCLVNNAGI 117 (280)
T ss_dssp HSCCCEEEEECC-
T ss_pred cCCCCEEEECCCc
Confidence 3579999887655
No 432
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=71.47 E-value=15 Score=32.35 Aligned_cols=81 Identities=10% Similarity=-0.103 Sum_probs=54.6
Q ss_pred CCCEEEEECCCCC--h-hHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhh----hhhhcC
Q 018352 31 PYVTVCDLYCGAG--V-DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKA 103 (357)
Q Consensus 31 ~~~~VLDlGCG~G--~-~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~----~l~~~~ 103 (357)
.+.+||=.|++.| . .+..+++.+ .+|+++|.+++.++.+.+.++..+ .++.++.+|+.+..-.. .....
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~- 81 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEG-FTVFAGRRNGEKLAPLVAEIEAAG--GRIVARSLDARNEDEVTAFLNAADAH- 81 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTT-CEEEEEESSGGGGHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECcCCCHHHHHHHHHHHHhh-
Confidence 4568888898776 1 223333344 489999999998888777766542 37889999998743211 12223
Q ss_pred CcccEEEEccch
Q 018352 104 NQADLVCCFQHL 115 (357)
Q Consensus 104 ~~FDlV~~~~~l 115 (357)
+..|+++.+.+.
T Consensus 82 g~id~lv~nAg~ 93 (252)
T 3h7a_A 82 APLEVTIFNVGA 93 (252)
T ss_dssp SCEEEEEECCCC
T ss_pred CCceEEEECCCc
Confidence 689999877654
No 433
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=71.43 E-value=21 Score=31.49 Aligned_cols=112 Identities=13% Similarity=-0.013 Sum_probs=66.3
Q ss_pred CCCEEEEECCCCC--h-hHHHHHHhcCCeEEEE-eCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhh----hhhc
Q 018352 31 PYVTVCDLYCGAG--V-DVDKWETALIANYIGI-DVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEK 102 (357)
Q Consensus 31 ~~~~VLDlGCG~G--~-~l~k~~~~~~~~v~Gi-DiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~----l~~~ 102 (357)
.+.+||=.|++.| . .+..+++.+ .+|+.+ +.+.+.++.+.+..+... .++.++.+|+.+..-... ....
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G-~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEG-ANVVLTYNGAAEGAATAVAEIEKLG--RSALAIKADLTNAAEVEAAISAAADK 83 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECSSCHHHHHHHHHHHTTT--SCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEcCCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4578898898776 2 223343444 478777 777777776666655432 367889999987432111 1112
Q ss_pred CCcccEEEEccchh-h--cc--CCHHHHH-----------HHHHHHHhcccCCcEEEEE
Q 018352 103 ANQADLVCCFQHLQ-M--CF--ETEERAR-----------RLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 103 ~~~FDlV~~~~~lh-~--~f--es~~~~~-----------~~L~~i~~~LkpGG~fi~t 145 (357)
.+..|+++.+.+.. . .+ .+.++.+ .+++.+...++.+|.++.+
T Consensus 84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~i 142 (259)
T 3edm_A 84 FGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTF 142 (259)
T ss_dssp HCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred hCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEE
Confidence 35789998766432 1 01 1233322 3556666777778887766
No 434
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=71.26 E-value=31 Score=30.71 Aligned_cols=82 Identities=13% Similarity=0.048 Sum_probs=52.0
Q ss_pred CCCEEEEECCCCC--hh-HHHHHHhcCCeEEEEeCC----------------hHHHHHHHHHhHhcCCCceeEEEEcCCC
Q 018352 31 PYVTVCDLYCGAG--VD-VDKWETALIANYIGIDVA----------------TSGIGEARDTWENQRKNFIAEFFEADPC 91 (357)
Q Consensus 31 ~~~~VLDlGCG~G--~~-l~k~~~~~~~~v~GiDiS----------------~~~l~~A~~r~~~~~~~~~v~f~~~D~~ 91 (357)
.+.+||=.|++.| .. +..+++ ...+|+++|.+ .+.++...+..+.. ..++.++.+|+.
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~-~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~ 86 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQ-EGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH--NRRIVTAEVDVR 86 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHH-TTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT--TCCEEEEECCTT
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-CCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhc--CCceEEEEcCCC
Confidence 3578999998876 22 233333 44589999987 66676666655443 236889999998
Q ss_pred CCchhhh----hhhcCCcccEEEEccch
Q 018352 92 AENFETQ----MQEKANQADLVCCFQHL 115 (357)
Q Consensus 92 ~~~~~~~----l~~~~~~FDlV~~~~~l 115 (357)
+..-... .....+..|+++.+.++
T Consensus 87 ~~~~v~~~~~~~~~~~g~id~lv~nAg~ 114 (286)
T 3uve_A 87 DYDALKAAVDSGVEQLGRLDIIVANAGI 114 (286)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCcc
Confidence 7432211 11123579999887664
No 435
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=71.07 E-value=13 Score=32.27 Aligned_cols=101 Identities=9% Similarity=-0.079 Sum_probs=60.4
Q ss_pred CCEEEEECCCC-ChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEEE
Q 018352 32 YVTVCDLYCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (357)
Q Consensus 32 ~~~VLDlGCG~-G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~ 110 (357)
..+|+=+|||. |..+.+.+..... |+++|.+++.++.++ . .+.++.+|+.+....... .-...|+|+
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~----~~~~i~gd~~~~~~l~~a--~i~~ad~vi 76 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLR-----S----GANFVHGDPTRVSDLEKA--NVRGARAVI 76 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----T----TCEEEESCTTCHHHHHHT--TCTTCSEEE
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----c----CCeEEEcCCCCHHHHHhc--CcchhcEEE
Confidence 46899899874 3222232222333 999999998776554 1 367899998764432111 135789887
Q ss_pred EccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCchH
Q 018352 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDSST 151 (357)
Q Consensus 111 ~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~~~ 151 (357)
+.. .+. .....+....+.+.|+..++...-+...
T Consensus 77 ~~~------~~d-~~n~~~~~~a~~~~~~~~iia~~~~~~~ 110 (234)
T 2aef_A 77 VDL------ESD-SETIHCILGIRKIDESVRIIAEAERYEN 110 (234)
T ss_dssp ECC------SCH-HHHHHHHHHHHHHCSSSEEEEECSSGGG
T ss_pred EcC------CCc-HHHHHHHHHHHHHCCCCeEEEEECCHhH
Confidence 643 122 2334455556667888788777665543
No 436
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=70.50 E-value=4.7 Score=39.10 Aligned_cols=44 Identities=9% Similarity=0.037 Sum_probs=35.5
Q ss_pred CCEEEEECCCCChhHHHHHHhc--CCe----EEEEeCChHHHHHHHHHhH
Q 018352 32 YVTVCDLYCGAGVDVDKWETAL--IAN----YIGIDVATSGIGEARDTWE 75 (357)
Q Consensus 32 ~~~VLDlGCG~G~~l~k~~~~~--~~~----v~GiDiS~~~l~~A~~r~~ 75 (357)
..+|||+.||.|+....+..++ ..- |.++|+++.+++.-+..+.
T Consensus 10 ~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~ 59 (403)
T 4dkj_A 10 VIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHS 59 (403)
T ss_dssp EEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHC
T ss_pred cceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcC
Confidence 3589999999999988887776 334 8899999999887666654
No 437
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=70.28 E-value=18 Score=32.84 Aligned_cols=82 Identities=13% Similarity=0.018 Sum_probs=54.7
Q ss_pred CCCEEEEECCCCC--h-hHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhh----hhhcC
Q 018352 31 PYVTVCDLYCGAG--V-DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEKA 103 (357)
Q Consensus 31 ~~~~VLDlGCG~G--~-~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~----l~~~~ 103 (357)
.+.+||=.|++.| . .+..+++.+ .+|+++|.+++.++.+.+.++... .++.++.+|+.+..-... .....
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 106 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRG-ARLVLSDVDQPALEQAVNGLRGQG--FDAHGVVCDVRHLDEMVRLADEAFRLL 106 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHhC
Confidence 4568999998866 1 223333334 589999999999988877776542 368899999987432111 11123
Q ss_pred CcccEEEEccch
Q 018352 104 NQADLVCCFQHL 115 (357)
Q Consensus 104 ~~FDlV~~~~~l 115 (357)
+..|+++.+.++
T Consensus 107 g~id~lvnnAg~ 118 (301)
T 3tjr_A 107 GGVDVVFSNAGI 118 (301)
T ss_dssp SSCSEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 579999887654
No 438
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=70.27 E-value=25 Score=31.50 Aligned_cols=99 Identities=17% Similarity=0.195 Sum_probs=53.9
Q ss_pred CEEEEECCCC-ChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEE----EEcCCCCCchhhhhhhcCCccc
Q 018352 33 VTVCDLYCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEF----FEADPCAENFETQMQEKANQAD 107 (357)
Q Consensus 33 ~~VLDlGCG~-G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f----~~~D~~~~~~~~~l~~~~~~FD 107 (357)
++|.=||+|. |..+...+.....+|+++|.+++.++..++.- . .+.. ....+......+ +...-...|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g--~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d 76 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNG--L----IADFNGEEVVANLPIFSPEE-IDHQNEQVD 76 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHC--E----EEEETTEEEEECCCEECGGG-CCTTSCCCS
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCC--E----EEEeCCCeeEecceeecchh-hcccCCCCC
Confidence 4789999996 33333333333348999999998777665431 1 1110 001110000000 000012689
Q ss_pred EEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 108 LVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 108 lV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
+|+..- .......+++.+...|+++..++..
T Consensus 77 ~vi~~v-------~~~~~~~v~~~l~~~l~~~~~iv~~ 107 (316)
T 2ew2_A 77 LIIALT-------KAQQLDAMFKAIQPMITEKTYVLCL 107 (316)
T ss_dssp EEEECS-------CHHHHHHHHHHHGGGCCTTCEEEEC
T ss_pred EEEEEe-------ccccHHHHHHHHHHhcCCCCEEEEe
Confidence 987644 2334677888899999887765544
No 439
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=69.87 E-value=10 Score=32.10 Aligned_cols=130 Identities=15% Similarity=0.064 Sum_probs=65.7
Q ss_pred CCCcchHHHHHHH--HHHHHHHHcCCCCCEEEEECCCCChhHHHHHHh-cCCeEEEEeCChHHHHHHHHHhHhcCCCcee
Q 018352 7 PRSELTHHRLYEF--AKTALIKIYSHPYVTVCDLYCGAGVDVDKWETA-LIANYIGIDVATSGIGEARDTWENQRKNFIA 83 (357)
Q Consensus 7 ~r~~~p~~~~~nw--vks~Li~~~~~~~~~VLDlGCG~G~~l~k~~~~-~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v 83 (357)
+|..+.+.|+-.. +....+.+...-..-|||+|-|+|+.-..+... +...++.+|-.-.+ ..+. ....-
T Consensus 14 SRLDsfirRltaQR~~L~~a~~~v~~~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~-------hp~~-~P~~e 85 (174)
T 3iht_A 14 SRLDLFIDRMVSQRACLEHAIAQTAGLSGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVAS-------HPDS-TPPEA 85 (174)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTTCCSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCC-------CGGG-CCCGG
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEecCCCChhHHHHHHhCCCCcEEEEEeeecc-------CCCC-CCchH
Confidence 4445555554211 112233444555678999999999888877665 66789999854111 0000 01122
Q ss_pred EEEEcCCCCCchhhhhhhcCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 84 EFFEADPCAENFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 84 ~f~~~D~~~~~~~~~l~~~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
.++.+|+... +......-..+.-++-+-++.|+--.+...+..+---|..+|.|||+++-.
T Consensus 86 ~~ilGdi~~t-L~~~~~r~g~~a~LaHaD~G~g~~~~d~a~a~~lsplI~~~la~GGi~vS~ 146 (174)
T 3iht_A 86 QLILGDIRET-LPATLERFGATASLVHADLGGHNREKNDRFARLISPLIEPHLAQGGLMVSS 146 (174)
T ss_dssp GEEESCHHHH-HHHHHHHHCSCEEEEEECCCCSCHHHHHHHHHHHHHHHGGGEEEEEEEEES
T ss_pred heecccHHHH-HHHHHHhcCCceEEEEeecCCCCcchhHHHHHhhhHHHHHHhcCCcEEEeC
Confidence 3555654331 100000002334444444444441111122333445577899999998754
No 440
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=69.84 E-value=37 Score=30.13 Aligned_cols=86 Identities=10% Similarity=-0.001 Sum_probs=51.7
Q ss_pred EEEEECCCCCh-hHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEEEEc
Q 018352 34 TVCDLYCGAGV-DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVCCF 112 (357)
Q Consensus 34 ~VLDlGCG~G~-~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~~~ 112 (357)
+|.=||||.=+ .+...+.. ..+|+++|.+++.++.+.+. .. .. .+ .. .. -...|+|+..
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~--g~------~~--~~-~~-~~-------~~~~D~vi~~ 62 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEE--FG------SE--AV-PL-ER-------VAEARVIFTC 62 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHH--HC------CE--EC-CG-GG-------GGGCSEEEEC
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHC--CC------cc--cC-HH-HH-------HhCCCEEEEe
Confidence 57788999743 33333333 44799999998877665443 11 11 11 11 11 1358998764
Q ss_pred cchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 113 QHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 113 ~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
- .+....+.+++.+...+++|..++.+
T Consensus 63 v------~~~~~~~~v~~~l~~~l~~~~~vv~~ 89 (289)
T 2cvz_A 63 L------PTTREVYEVAEALYPYLREGTYWVDA 89 (289)
T ss_dssp C------SSHHHHHHHHHHHTTTCCTTEEEEEC
T ss_pred C------CChHHHHHHHHHHHhhCCCCCEEEEC
Confidence 3 22334566778888889888776644
No 441
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=69.51 E-value=11 Score=35.14 Aligned_cols=95 Identities=11% Similarity=0.010 Sum_probs=58.7
Q ss_pred CEEEEECCCC-Ch-hHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhc-------CCC----------ceeEEEEcCCCCC
Q 018352 33 VTVCDLYCGA-GV-DVDKWETALIANYIGIDVATSGIGEARDTWENQ-------RKN----------FIAEFFEADPCAE 93 (357)
Q Consensus 33 ~~VLDlGCG~-G~-~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~-------~~~----------~~v~f~~~D~~~~ 93 (357)
.+|-=||+|. |. .+..++.++. +|++.|.+++.++.+.++.+.. +.. .++.+. .
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~-~----- 79 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-T----- 79 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-C-----
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEe-C-----
Confidence 4788899996 32 3344444454 8999999999999887654321 100 011111 1
Q ss_pred chhhhhhhcCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEE
Q 018352 94 NFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFL 143 (357)
Q Consensus 94 ~~~~~l~~~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi 143 (357)
++.+ .-...|+|+..- .++.+..+.+++++...++|+-+++
T Consensus 80 ~~~e----av~~aDlVieav-----pe~~~~k~~v~~~l~~~~~~~~Ii~ 120 (319)
T 2dpo_A 80 NLAE----AVEGVVHIQECV-----PENLDLKRKIFAQLDSIVDDRVVLS 120 (319)
T ss_dssp CHHH----HTTTEEEEEECC-----CSCHHHHHHHHHHHHTTCCSSSEEE
T ss_pred CHHH----HHhcCCEEEEec-----cCCHHHHHHHHHHHHhhCCCCeEEE
Confidence 1111 125688887643 3455566788999999999987654
No 442
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=69.37 E-value=13 Score=33.58 Aligned_cols=83 Identities=17% Similarity=0.066 Sum_probs=56.5
Q ss_pred CCCEEEEECCCCCh---hHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhh----hhhhcC
Q 018352 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKA 103 (357)
Q Consensus 31 ~~~~VLDlGCG~G~---~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~----~l~~~~ 103 (357)
.+.++|=-|++.|- .+..+++.+ .+|+.+|.+++.++++.+.++..+ .++.++++|+.+..-.. ......
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~G-a~Vvi~~~~~~~~~~~~~~l~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAG-ARVILNDIRATLLAESVDTLTRKG--YDAHGVAFDVTDELAIEAAFSKLDAEG 84 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTT-CEEEECCSCHHHHHHHHHHHHHTT--CCEEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 46778888887762 233444444 599999999999988877776553 36888999998754221 122245
Q ss_pred CcccEEEEccchh
Q 018352 104 NQADLVCCFQHLQ 116 (357)
Q Consensus 104 ~~FDlV~~~~~lh 116 (357)
+..|+++.+.++.
T Consensus 85 G~iDiLVNNAG~~ 97 (255)
T 4g81_D 85 IHVDILINNAGIQ 97 (255)
T ss_dssp CCCCEEEECCCCC
T ss_pred CCCcEEEECCCCC
Confidence 7899998876543
No 443
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=69.30 E-value=34 Score=30.81 Aligned_cols=85 Identities=13% Similarity=0.016 Sum_probs=55.6
Q ss_pred CCCEEEEECCCCCh---hHHHHHHhcC--CeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhh----hhh
Q 018352 31 PYVTVCDLYCGAGV---DVDKWETALI--ANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQE 101 (357)
Q Consensus 31 ~~~~VLDlGCG~G~---~l~k~~~~~~--~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~----l~~ 101 (357)
.+.+||=.|++.|- .+..+++.+. .+|+.++.+.+.++.+.+.+.......++.++.+|+.+..-... ...
T Consensus 32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 111 (287)
T 3rku_A 32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ 111 (287)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 35789999987762 2233444443 38999999999988877766543223378899999987543221 111
Q ss_pred cCCcccEEEEccch
Q 018352 102 KANQADLVCCFQHL 115 (357)
Q Consensus 102 ~~~~FDlV~~~~~l 115 (357)
..+..|+++.+.+.
T Consensus 112 ~~g~iD~lVnnAG~ 125 (287)
T 3rku_A 112 EFKDIDILVNNAGK 125 (287)
T ss_dssp GGCSCCEEEECCCC
T ss_pred hcCCCCEEEECCCc
Confidence 23579999887653
No 444
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=69.22 E-value=26 Score=31.54 Aligned_cols=60 Identities=7% Similarity=-0.202 Sum_probs=40.0
Q ss_pred CCEEEEECCCCC--h-hHHHHHHhcCCeEEEEe-CChHHHHHHHHHhH-hcCCCceeEEEEcCCCCCc
Q 018352 32 YVTVCDLYCGAG--V-DVDKWETALIANYIGID-VATSGIGEARDTWE-NQRKNFIAEFFEADPCAEN 94 (357)
Q Consensus 32 ~~~VLDlGCG~G--~-~l~k~~~~~~~~v~GiD-iS~~~l~~A~~r~~-~~~~~~~v~f~~~D~~~~~ 94 (357)
+.+||=.|++.| . .+..+++.+ .+|+++| .+++.++.+.+.+. .. ..++.++.+|+.+..
T Consensus 9 ~k~~lVTGas~GIG~aia~~la~~G-~~V~~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~ 73 (291)
T 1e7w_A 9 VPVALVTGAAKRLGRSIAEGLHAEG-YAVCLHYHRSAAEANALSATLNARR--PNSAITVQADLSNVA 73 (291)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHHS--TTCEEEEECCCSSSC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-CeEEEEcCCCHHHHHHHHHHHhhhc--CCeeEEEEeecCCcc
Confidence 567887887665 1 222333334 5899999 99888877766654 22 126888999998755
No 445
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=69.09 E-value=56 Score=28.58 Aligned_cols=81 Identities=9% Similarity=0.016 Sum_probs=51.0
Q ss_pred CCEEEEECCCCC--hhH-HHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhh----hhhhcCC
Q 018352 32 YVTVCDLYCGAG--VDV-DKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKAN 104 (357)
Q Consensus 32 ~~~VLDlGCG~G--~~l-~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~----~l~~~~~ 104 (357)
+.+||=.|++.| ..+ ..+++.+ .+|+.+|.+++.++...+.++..+ .++.++.+|+.+..-.. ......+
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (262)
T 1zem_A 7 GKVCLVTGAGGNIGLATALRLAEEG-TAIALLDMNREALEKAEASVREKG--VEARSYVCDVTSEEAVIGTVDSVVRDFG 83 (262)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHTTT--SCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 568888888765 222 2333334 589999999988877666554432 26788999997743211 1111235
Q ss_pred cccEEEEccch
Q 018352 105 QADLVCCFQHL 115 (357)
Q Consensus 105 ~FDlV~~~~~l 115 (357)
..|+++.+.+.
T Consensus 84 ~id~lv~nAg~ 94 (262)
T 1zem_A 84 KIDFLFNNAGY 94 (262)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78999887654
No 446
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=69.02 E-value=37 Score=30.58 Aligned_cols=82 Identities=15% Similarity=-0.038 Sum_probs=51.5
Q ss_pred CCCEEEEECCCCC--h-hHHHHHHhcCCeEEEEeCC------------hHHHHHHHHHhHhcCCCceeEEEEcCCCCCch
Q 018352 31 PYVTVCDLYCGAG--V-DVDKWETALIANYIGIDVA------------TSGIGEARDTWENQRKNFIAEFFEADPCAENF 95 (357)
Q Consensus 31 ~~~~VLDlGCG~G--~-~l~k~~~~~~~~v~GiDiS------------~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~ 95 (357)
.+.++|=.|++.| . .+..+++ ...+|+++|.+ .+.++.+.+..+..+ .++.++.+|+.+..-
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la~-~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~ 103 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLAR-EGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG--RRIIASQVDVRDFDA 103 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHH-TTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH-CCCEEEEEecccccccccccccCHHHHHHHHHHHHhcC--CceEEEECCCCCHHH
Confidence 3568998998776 2 2233333 44589999987 666766665555432 368899999987432
Q ss_pred hhh----hhhcCCcccEEEEccch
Q 018352 96 ETQ----MQEKANQADLVCCFQHL 115 (357)
Q Consensus 96 ~~~----l~~~~~~FDlV~~~~~l 115 (357)
... .....+..|+++.+.+.
T Consensus 104 v~~~~~~~~~~~g~iD~lv~nAg~ 127 (299)
T 3t7c_A 104 MQAAVDDGVTQLGRLDIVLANAAL 127 (299)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHhCCCCEEEECCCC
Confidence 111 11123579999877654
No 447
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=68.80 E-value=8.2 Score=37.55 Aligned_cols=97 Identities=16% Similarity=0.084 Sum_probs=59.8
Q ss_pred CCCCCEEEEECC-C-CChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCch-----------
Q 018352 29 SHPYVTVCDLYC-G-AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENF----------- 95 (357)
Q Consensus 29 ~~~~~~VLDlGC-G-~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~----------- 95 (357)
+.++.+||=+|+ | -|..+..+++....++++++.+++-++.+++.-. . .++ |....++
T Consensus 226 ~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~lGa------~-~vi--~~~~~d~~~~~~~~~~~~ 296 (456)
T 3krt_A 226 MKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGA------E-AII--DRNAEGYRFWKDENTQDP 296 (456)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTC------C-EEE--ETTTTTCCSEEETTEECH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhhCC------c-EEE--ecCcCcccccccccccch
Confidence 357899999998 4 3556666666655689999999988888855321 1 111 1111111
Q ss_pred ------hhhhhh--cCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 96 ------ETQMQE--KANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 96 ------~~~l~~--~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
...+.. ....+|+|+..-+- ..+..+.++|++||.++..
T Consensus 297 ~~~~~~~~~i~~~t~g~g~Dvvid~~G~-----------~~~~~~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 297 KEWKRFGKRIRELTGGEDIDIVFEHPGR-----------ETFGASVFVTRKGGTITTC 343 (456)
T ss_dssp HHHHHHHHHHHHHHTSCCEEEEEECSCH-----------HHHHHHHHHEEEEEEEEES
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEcCCc-----------hhHHHHHHHhhCCcEEEEE
Confidence 011111 13579999764321 2466777899999999865
No 448
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=68.52 E-value=47 Score=29.42 Aligned_cols=84 Identities=12% Similarity=-0.072 Sum_probs=54.1
Q ss_pred CCCEEEEECCCCC--h-hHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCC-CceeEEEEcCCCCCchhh----hhhhc
Q 018352 31 PYVTVCDLYCGAG--V-DVDKWETALIANYIGIDVATSGIGEARDTWENQRK-NFIAEFFEADPCAENFET----QMQEK 102 (357)
Q Consensus 31 ~~~~VLDlGCG~G--~-~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~-~~~v~f~~~D~~~~~~~~----~l~~~ 102 (357)
.+.+||=.|++.| . .+..+++.+ .+|+.+|.+++.++.+.+.++.... ..++.++.+|+.+..-.. .....
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (281)
T 3svt_A 10 QDRTYLVTGGGSGIGKGVAAGLVAAG-ASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW 88 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 4568898898765 2 223343344 4899999999988887777654321 226889999998743211 11112
Q ss_pred CCcccEEEEccch
Q 018352 103 ANQADLVCCFQHL 115 (357)
Q Consensus 103 ~~~FDlV~~~~~l 115 (357)
.+..|+++.+.+.
T Consensus 89 ~g~id~lv~nAg~ 101 (281)
T 3svt_A 89 HGRLHGVVHCAGG 101 (281)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 3578999887654
No 449
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=68.13 E-value=3.8 Score=37.85 Aligned_cols=96 Identities=11% Similarity=-0.042 Sum_probs=56.4
Q ss_pred CCCCC-EEEEECC-C-CChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEc-CCCCCchhhhhhhcCC
Q 018352 29 SHPYV-TVCDLYC-G-AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEA-DPCAENFETQMQEKAN 104 (357)
Q Consensus 29 ~~~~~-~VLDlGC-G-~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~-D~~~~~~~~~l~~~~~ 104 (357)
+.++. +||-+|| | -|..+..+++....+++++|.+++-++.+++.-. . ..+.. |...... ..+ ...
T Consensus 147 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa------~-~v~~~~~~~~~~~-~~~--~~~ 216 (330)
T 1tt7_A 147 LSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGA------S-EVISREDVYDGTL-KAL--SKQ 216 (330)
T ss_dssp CCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTC------S-EEEEHHHHCSSCC-CSS--CCC
T ss_pred cCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC------c-EEEECCCchHHHH-HHh--hcC
Confidence 44564 8999998 3 3445556666544589999999888887765311 1 11111 1000000 001 124
Q ss_pred cccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 105 QADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 105 ~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
.+|+|+...+ . ..+....++|++||+++..
T Consensus 217 ~~d~vid~~g------~-----~~~~~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 217 QWQGAVDPVG------G-----KQLASLLSKIQYGGSVAVS 246 (330)
T ss_dssp CEEEEEESCC------T-----HHHHHHHTTEEEEEEEEEC
T ss_pred CccEEEECCc------H-----HHHHHHHHhhcCCCEEEEE
Confidence 6999876442 1 1367778899999998865
No 450
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=67.70 E-value=13 Score=36.37 Aligned_cols=58 Identities=21% Similarity=0.092 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHcCCCCCEEEEECCCCChhHHHHHH---h-c--CCeEEEEeCChHHHHHHHHHhHh
Q 018352 16 LYEFAKTALIKIYSHPYVTVCDLYCGAGVDVDKWET---A-L--IANYIGIDVATSGIGEARDTWEN 76 (357)
Q Consensus 16 ~~nwvks~Li~~~~~~~~~VLDlGCG~G~~l~k~~~---~-~--~~~v~GiDiS~~~l~~A~~r~~~ 76 (357)
+-.|+...+.+.- ..+|+|+|.|+|..+.-+++ . . ..+|+.|++|+...+.-++++..
T Consensus 125 la~~~~~~~~~~g---~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 125 LARPVAQALDASG---TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp HHHHHHHHHHHHT---CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred HHHHHHHHHHhcC---CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 3467666554432 47999999999975554433 2 1 34899999999988777766653
No 451
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=67.59 E-value=35 Score=30.32 Aligned_cols=90 Identities=18% Similarity=0.140 Sum_probs=52.2
Q ss_pred CEEEEECCCC-ChhHHHHHH-hcC-CeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCC-cccE
Q 018352 33 VTVCDLYCGA-GVDVDKWET-ALI-ANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKAN-QADL 108 (357)
Q Consensus 33 ~~VLDlGCG~-G~~l~k~~~-~~~-~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~-~FDl 108 (357)
.+|.=||+|. |..+...+. .+. .+|+++|.+++.++.+++. +. ... ...| ... .-. ..|+
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~----g~--~~~-~~~~-----~~~----~~~~~aDv 65 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL----GI--IDE-GTTS-----IAK----VEDFSPDF 65 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT----TS--CSE-EESC-----GGG----GGGTCCSE
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHC----CC--ccc-ccCC-----HHH----HhcCCCCE
Confidence 3678899996 433333333 332 2799999999887765421 11 101 1111 111 113 6899
Q ss_pred EEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
|+..- .......++..+...+++|..++..
T Consensus 66 Vilav-------p~~~~~~v~~~l~~~l~~~~iv~~~ 95 (281)
T 2g5c_A 66 VMLSS-------PVRTFREIAKKLSYILSEDATVTDQ 95 (281)
T ss_dssp EEECS-------CHHHHHHHHHHHHHHSCTTCEEEEC
T ss_pred EEEcC-------CHHHHHHHHHHHHhhCCCCcEEEEC
Confidence 87643 2334557788888889998866543
No 452
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=67.34 E-value=25 Score=31.93 Aligned_cols=89 Identities=15% Similarity=0.120 Sum_probs=54.9
Q ss_pred CEEEEECCCCCh-hHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEEEE
Q 018352 33 VTVCDLYCGAGV-DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVCC 111 (357)
Q Consensus 33 ~~VLDlGCG~G~-~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~~ 111 (357)
.+|.=||+|.=+ .+...+.....+|++.|.+++.++.+.+. .+.+ . .+..+ ... .|+|+.
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~--------g~~~--~----~~~~~----~~~-aDvvi~ 76 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEA--------GATL--A----DSVAD----VAA-ADLIHI 76 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHT--------TCEE--C----SSHHH----HTT-SSEEEE
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC--------CCEE--c----CCHHH----HHh-CCEEEE
Confidence 578999999743 33333333334899999999877665432 1111 1 11211 124 899876
Q ss_pred ccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEe
Q 018352 112 FQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 112 ~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~ 146 (357)
.- .+....+.+++.+...+++|..++-+.
T Consensus 77 ~v------p~~~~~~~v~~~l~~~l~~g~ivv~~s 105 (296)
T 3qha_A 77 TV------LDDAQVREVVGELAGHAKPGTVIAIHS 105 (296)
T ss_dssp CC------SSHHHHHHHHHHHHTTCCTTCEEEECS
T ss_pred EC------CChHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 43 234556778899999999988776553
No 453
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=67.01 E-value=65 Score=28.52 Aligned_cols=112 Identities=13% Similarity=0.014 Sum_probs=62.6
Q ss_pred CCCEEEEECCCCC--hhH-HHHHHhcCCeEEEEeCChHH-HHHHHHHhHhcCCCceeEEEEcCCCCCchhhh----hhhc
Q 018352 31 PYVTVCDLYCGAG--VDV-DKWETALIANYIGIDVATSG-IGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEK 102 (357)
Q Consensus 31 ~~~~VLDlGCG~G--~~l-~k~~~~~~~~v~GiDiS~~~-l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~----l~~~ 102 (357)
.+.+||=.|++.| ..+ ..+++ ...+|++++.+... ++.+.+.....+ .++.++.+|+.+..-... ....
T Consensus 28 ~~k~vlVTGas~gIG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 104 (283)
T 1g0o_A 28 EGKVALVTGAGRGIGREMAMELGR-RGCKVIVNYANSTESAEEVVAAIKKNG--SDAACVKANVGVVEDIVRMFEEAVKI 104 (283)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHH-TTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHH-CCCEEEEEeCCchHHHHHHHHHHHHhC--CCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3567888887765 122 23333 34589999988643 444434343321 267889999876432111 1112
Q ss_pred CCcccEEEEccchhhc--c--CCHHHHH-----------HHHHHHHhcccCCcEEEEE
Q 018352 103 ANQADLVCCFQHLQMC--F--ETEERAR-----------RLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 103 ~~~FDlV~~~~~lh~~--f--es~~~~~-----------~~L~~i~~~LkpGG~fi~t 145 (357)
.+..|+++.+.+.... + .+.++.+ .+++.+...|+.+|.++.+
T Consensus 105 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 162 (283)
T 1g0o_A 105 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILM 162 (283)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEE
Confidence 2578999887654320 0 1233332 2445666666778888866
No 454
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=66.49 E-value=23 Score=30.71 Aligned_cols=79 Identities=8% Similarity=-0.005 Sum_probs=51.6
Q ss_pred CCCEEEEECCCCC--hh-HHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCccc
Q 018352 31 PYVTVCDLYCGAG--VD-VDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (357)
Q Consensus 31 ~~~~VLDlGCG~G--~~-l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FD 107 (357)
++.+||=.|++.| .. +..+++.+ .+|+.+|.+.+.++...+.... ++.+..+|+.+..-...+-...+..|
T Consensus 13 ~~k~vlVTGas~gIG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~id 86 (249)
T 3f9i_A 13 TGKTSLITGASSGIGSAIARLLHKLG-SKVIISGSNEEKLKSLGNALKD-----NYTIEVCNLANKEECSNLISKTSNLD 86 (249)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHCS-----SEEEEECCTTSHHHHHHHHHTCSCCS
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHHhcc-----CccEEEcCCCCHHHHHHHHHhcCCCC
Confidence 5678998888765 22 23333334 5899999999888776665532 57888999877443222222335799
Q ss_pred EEEEccch
Q 018352 108 LVCCFQHL 115 (357)
Q Consensus 108 lV~~~~~l 115 (357)
+++.+.+.
T Consensus 87 ~li~~Ag~ 94 (249)
T 3f9i_A 87 ILVCNAGI 94 (249)
T ss_dssp EEEECCC-
T ss_pred EEEECCCC
Confidence 99887654
No 455
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=66.47 E-value=42 Score=29.92 Aligned_cols=82 Identities=7% Similarity=-0.140 Sum_probs=49.7
Q ss_pred CCCEEEEECCCCC--h-hHHHHHHhcCCeEEEEeCCh-HHHHHHHHHhH-hcCCCceeEEEEcCCCC----Cchhh----
Q 018352 31 PYVTVCDLYCGAG--V-DVDKWETALIANYIGIDVAT-SGIGEARDTWE-NQRKNFIAEFFEADPCA----ENFET---- 97 (357)
Q Consensus 31 ~~~~VLDlGCG~G--~-~l~k~~~~~~~~v~GiDiS~-~~l~~A~~r~~-~~~~~~~v~f~~~D~~~----~~~~~---- 97 (357)
.+.+||=.|++.| . .+..+++.+ .+|+++|.++ +.++.+.+... .. ..++.++.+|+.+ ..-..
T Consensus 22 ~~k~~lVTGas~gIG~aia~~L~~~G-~~V~~~~r~~~~~~~~~~~~l~~~~--~~~~~~~~~Dv~~~~~~~~~v~~~~~ 98 (288)
T 2x9g_A 22 EAPAAVVTGAAKRIGRAIAVKLHQTG-YRVVIHYHNSAEAAVSLADELNKER--SNTAVVCQADLTNSNVLPASCEEIIN 98 (288)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHHT-CEEEEEESSCHHHHHHHHHHHHHHS--TTCEEEEECCCSCSTTHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCC-CeEEEEeCCchHHHHHHHHHHHhhc--CCceEEEEeecCCccCCHHHHHHHHH
Confidence 3568888887765 1 223333345 4899999998 77766655543 22 1267889999987 32111
Q ss_pred hhhhcCCcccEEEEccch
Q 018352 98 QMQEKANQADLVCCFQHL 115 (357)
Q Consensus 98 ~l~~~~~~FDlV~~~~~l 115 (357)
......+..|+++.+.++
T Consensus 99 ~~~~~~g~iD~lvnnAG~ 116 (288)
T 2x9g_A 99 SCFRAFGRCDVLVNNASA 116 (288)
T ss_dssp HHHHHHSCCCEEEECCCC
T ss_pred HHHHhcCCCCEEEECCCC
Confidence 111123578999887654
No 456
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=66.38 E-value=32 Score=30.50 Aligned_cols=86 Identities=14% Similarity=0.127 Sum_probs=51.7
Q ss_pred EEEEECCCC-ChhHH-HHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEEEE
Q 018352 34 TVCDLYCGA-GVDVD-KWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVCC 111 (357)
Q Consensus 34 ~VLDlGCG~-G~~l~-k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~~ 111 (357)
+|.=||||. |..+. .+...+. +|+++|.+++.++.+.+. +. ... ...| .. .. ...|+|+.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~----g~--~~~-~~~~-----~~----~~-~~~D~vi~ 63 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVER----QL--VDE-AGQD-----LS----LL-QTAKIIFL 63 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT----TS--CSE-EESC-----GG----GG-TTCSEEEE
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhC----CC--Ccc-ccCC-----HH----Hh-CCCCEEEE
Confidence 677899996 43333 3333444 899999999887765421 11 101 1111 11 12 46899876
Q ss_pred ccchhhccCCHHHHHHHHHHHHhcccCCcEEEE
Q 018352 112 FQHLQMCFETEERARRLLQNVSSLLKPGGYFLG 144 (357)
Q Consensus 112 ~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~ 144 (357)
.- .......+++.+...+++|..++-
T Consensus 64 av-------~~~~~~~~~~~l~~~~~~~~~vv~ 89 (279)
T 2f1k_A 64 CT-------PIQLILPTLEKLIPHLSPTAIVTD 89 (279)
T ss_dssp CS-------CHHHHHHHHHHHGGGSCTTCEEEE
T ss_pred EC-------CHHHHHHHHHHHHhhCCCCCEEEE
Confidence 44 233466788888888988876643
No 457
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=66.28 E-value=25 Score=30.88 Aligned_cols=84 Identities=10% Similarity=-0.002 Sum_probs=54.3
Q ss_pred CCCEEEEECCCCCh---hHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCC-ceeEEEEcCCCCCchhh----hhhhc
Q 018352 31 PYVTVCDLYCGAGV---DVDKWETALIANYIGIDVATSGIGEARDTWENQRKN-FIAEFFEADPCAENFET----QMQEK 102 (357)
Q Consensus 31 ~~~~VLDlGCG~G~---~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~-~~v~f~~~D~~~~~~~~----~l~~~ 102 (357)
.+.++|=.|++.|- .+..+++.+. +|+.+|.+++.++.+.+.+...... .++.++.+|+.+..-.. .....
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK 84 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence 45688888987761 2333444454 8999999999888877766543211 36788999998743211 11112
Q ss_pred CCcccEEEEccch
Q 018352 103 ANQADLVCCFQHL 115 (357)
Q Consensus 103 ~~~FDlV~~~~~l 115 (357)
.+..|+++.+.++
T Consensus 85 ~g~iD~lvnnAg~ 97 (250)
T 3nyw_A 85 YGAVDILVNAAAM 97 (250)
T ss_dssp HCCEEEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 3579999887654
No 458
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=66.24 E-value=12 Score=34.85 Aligned_cols=93 Identities=12% Similarity=-0.032 Sum_probs=53.7
Q ss_pred CEEEEE-CCC-CChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh--cCCcccE
Q 018352 33 VTVCDL-YCG-AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE--KANQADL 108 (357)
Q Consensus 33 ~~VLDl-GCG-~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~--~~~~FDl 108 (357)
.+||=. |+| -|..+..+++....+|+++|.+++-++.+++.-. . ..+ |....++...+.. ....+|+
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga------~-~~~--~~~~~~~~~~v~~~~~~~g~D~ 236 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGA------A-HVL--NEKAPDFEATLREVMKAEQPRI 236 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTC------S-EEE--ETTSTTHHHHHHHHHHHHCCCE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC------C-EEE--ECCcHHHHHHHHHHhcCCCCcE
Confidence 566644 333 2444555555544599999999998888864311 1 112 3233333322221 1246999
Q ss_pred EEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
|+...+- + .+..+.++|++||+++..
T Consensus 237 vid~~g~-------~----~~~~~~~~l~~~G~iv~~ 262 (349)
T 3pi7_A 237 FLDAVTG-------P----LASAIFNAMPKRARWIIY 262 (349)
T ss_dssp EEESSCH-------H----HHHHHHHHSCTTCEEEEC
T ss_pred EEECCCC-------h----hHHHHHhhhcCCCEEEEE
Confidence 9765422 1 135567899999999876
No 459
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=66.09 E-value=65 Score=27.84 Aligned_cols=80 Identities=10% Similarity=0.090 Sum_probs=44.7
Q ss_pred CCEEEEECCCCC--h-hHHHHHHhcCCeEEEEeCCh--HHHHHHHHHhHhcCCCceeEEEEcCCCCC-c-hhhh---hhh
Q 018352 32 YVTVCDLYCGAG--V-DVDKWETALIANYIGIDVAT--SGIGEARDTWENQRKNFIAEFFEADPCAE-N-FETQ---MQE 101 (357)
Q Consensus 32 ~~~VLDlGCG~G--~-~l~k~~~~~~~~v~GiDiS~--~~l~~A~~r~~~~~~~~~v~f~~~D~~~~-~-~~~~---l~~ 101 (357)
+.+||=.|++.| . .+..+++.+...|+.+|.++ +.++...+... ..++.++.+|+.+. . .... +..
T Consensus 5 ~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (254)
T 1sby_A 5 NKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINP----KVNITFHTYDVTVPVAESKKLLKKIFD 80 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCT----TSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCC----CceEEEEEEecCCChHHHHHHHHHHHH
Confidence 567888887544 1 22333334543488999876 33333322221 22688899999875 2 2111 111
Q ss_pred cCCcccEEEEccch
Q 018352 102 KANQADLVCCFQHL 115 (357)
Q Consensus 102 ~~~~FDlV~~~~~l 115 (357)
..+..|+++.+.+.
T Consensus 81 ~~g~id~lv~~Ag~ 94 (254)
T 1sby_A 81 QLKTVDILINGAGI 94 (254)
T ss_dssp HHSCCCEEEECCCC
T ss_pred hcCCCCEEEECCcc
Confidence 22578999887653
No 460
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=66.00 E-value=59 Score=28.26 Aligned_cols=83 Identities=13% Similarity=0.003 Sum_probs=49.6
Q ss_pred CCCEEEEECCCCC--hhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhh-hh---hc-C
Q 018352 31 PYVTVCDLYCGAG--VDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ-MQ---EK-A 103 (357)
Q Consensus 31 ~~~~VLDlGCG~G--~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~-l~---~~-~ 103 (357)
.+.+||=.|++.| ..+.+.+.....+|++++.++..++...+.++... .++.++.+|+.+..-... +. .. .
T Consensus 13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 90 (266)
T 1xq1_A 13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKG--FQVTGSVCDASLRPEREKLMQTVSSMFG 90 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeeEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 3567888887654 22222223334589999999887776665554432 257889999876432111 11 11 1
Q ss_pred CcccEEEEccch
Q 018352 104 NQADLVCCFQHL 115 (357)
Q Consensus 104 ~~FDlV~~~~~l 115 (357)
+..|+|+.+.+.
T Consensus 91 ~~id~li~~Ag~ 102 (266)
T 1xq1_A 91 GKLDILINNLGA 102 (266)
T ss_dssp TCCSEEEEECCC
T ss_pred CCCcEEEECCCC
Confidence 578998876553
No 461
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=65.91 E-value=38 Score=30.46 Aligned_cols=88 Identities=15% Similarity=0.099 Sum_probs=53.4
Q ss_pred CEEEEECCCCCh-hH-HHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEEE
Q 018352 33 VTVCDLYCGAGV-DV-DKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (357)
Q Consensus 33 ~~VLDlGCG~G~-~l-~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~ 110 (357)
.+|.=||||.=+ .+ ..+...+. +|+++|.+++.++.+.+. + +. .. ....+ .-...|+|+
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~-~V~~~d~~~~~~~~~~~~----g----~~--~~----~~~~~----~~~~aDvvi 64 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVAA----G----AS--AA----RSARD----AVQGADVVI 64 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHT----T----CE--EC----SSHHH----HHTTCSEEE
T ss_pred CEEEEEeecHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHC----C----Ce--Ec----CCHHH----HHhCCCeEE
Confidence 578889999743 33 33444444 899999999877765443 1 11 11 11111 114579987
Q ss_pred EccchhhccCCHHHHHHHHH---HHHhcccCCcEEEEE
Q 018352 111 CFQHLQMCFETEERARRLLQ---NVSSLLKPGGYFLGI 145 (357)
Q Consensus 111 ~~~~lh~~fes~~~~~~~L~---~i~~~LkpGG~fi~t 145 (357)
..- ......+.++. .+...+++|..++-+
T Consensus 65 ~~v------p~~~~~~~v~~~~~~~~~~l~~~~~vi~~ 96 (302)
T 2h78_A 65 SML------PASQHVEGLYLDDDGLLAHIAPGTLVLEC 96 (302)
T ss_dssp ECC------SCHHHHHHHHHSSSCGGGSSCSSCEEEEC
T ss_pred EEC------CCHHHHHHHHcCchhHHhcCCCCcEEEEC
Confidence 643 23445666777 778889988877654
No 462
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=65.65 E-value=14 Score=34.51 Aligned_cols=96 Identities=9% Similarity=-0.029 Sum_probs=61.2
Q ss_pred CCEEEEECCCCCh--hHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhc-------CC-Cc---------eeEEEEcCCCC
Q 018352 32 YVTVCDLYCGAGV--DVDKWETALIANYIGIDVATSGIGEARDTWENQ-------RK-NF---------IAEFFEADPCA 92 (357)
Q Consensus 32 ~~~VLDlGCG~G~--~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~-------~~-~~---------~v~f~~~D~~~ 92 (357)
..+|.=||+|+=| .+..++.++. .|+..|++++.++.+.++.+.. +. .. ++.+.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~-~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~------ 78 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC------ 78 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE------
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccc------
Confidence 4579999999632 3444444555 8999999999999888766431 00 00 01110
Q ss_pred CchhhhhhhcCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEE
Q 018352 93 ENFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFL 143 (357)
Q Consensus 93 ~~~~~~l~~~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi 143 (357)
.++.+ .-...|+|+=. .+|+.+-.+++++++-++++|+-+|.
T Consensus 79 ~~l~~----a~~~ad~ViEa-----v~E~l~iK~~lf~~l~~~~~~~aIla 120 (319)
T 3ado_A 79 TNLAE----AVEGVVHIQEC-----VPENLDLKRKIFAQLDSIVDDRVVLS 120 (319)
T ss_dssp CCHHH----HTTTEEEEEEC-----CCSCHHHHHHHHHHHHTTCCSSSEEE
T ss_pred cchHh----HhccCcEEeec-----cccHHHHHHHHHHHHHHHhhhcceee
Confidence 01111 12446776533 47889999999999999999986554
No 463
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=65.12 E-value=2.5 Score=39.17 Aligned_cols=45 Identities=16% Similarity=0.169 Sum_probs=30.8
Q ss_pred CcccEEEEccc-----hhhc--cCCHHHHHHHHHHHHhcccCCcEEEEEeCC
Q 018352 104 NQADLVCCFQH-----LQMC--FETEERARRLLQNVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 104 ~~FDlV~~~~~-----lh~~--fes~~~~~~~L~~i~~~LkpGG~fi~t~pd 148 (357)
+++|+|++..+ .||. ..+.....-+++-+.++|+|||.|++-.-.
T Consensus 205 ~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kvyg 256 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYG 256 (320)
T ss_dssp CCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECC
T ss_pred CcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEec
Confidence 67999998664 3332 222223344678888999999999988544
No 464
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=65.07 E-value=9.7 Score=36.08 Aligned_cols=100 Identities=17% Similarity=0.192 Sum_probs=55.4
Q ss_pred CCCEEEEECCCC-ChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCC-CchhhhhhhcCCcccE
Q 018352 31 PYVTVCDLYCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCA-ENFETQMQEKANQADL 108 (357)
Q Consensus 31 ~~~~VLDlGCG~-G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~-~~~~~~l~~~~~~FDl 108 (357)
++.+|+=+|+|. |..+.+.+.....+|+++|.+++.++.+.+.... .+ ..|... ..+...+ ..+|+
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~-----~~---~~~~~~~~~l~~~~----~~~Dv 232 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGG-----RV---ITLTATEANIKKSV----QHADL 232 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTT-----SE---EEEECCHHHHHHHH----HHCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCc-----eE---EEecCCHHHHHHHH----hCCCE
Confidence 357999999974 3334444444444999999999888776554321 11 122221 1121111 36899
Q ss_pred EEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEe
Q 018352 109 VCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 109 V~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~ 146 (357)
|+..-.... .....-+.+...+.+++||.++-+.
T Consensus 233 Vi~~~g~~~----~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 233 LIGAVLVPG----AKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp EEECCC-----------CCSCHHHHTTSCTTCEEEECC
T ss_pred EEECCCCCc----cccchhHHHHHHHhhcCCCEEEEEe
Confidence 976543221 0011112455667889999888664
No 465
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=65.04 E-value=22 Score=27.55 Aligned_cols=101 Identities=11% Similarity=-0.007 Sum_probs=52.6
Q ss_pred CCEEEEECCCC-ChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEEE
Q 018352 32 YVTVCDLYCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (357)
Q Consensus 32 ~~~VLDlGCG~-G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~ 110 (357)
..+|+=+|||. |..+...+.....+|+++|.+++.++.++ .. ...++.+|..+....... ....+|+|+
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~----~~----~~~~~~~d~~~~~~l~~~--~~~~~d~vi 75 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----SY----ATHAVIANATEENELLSL--GIRNFEYVI 75 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT----TT----CSEEEECCTTCHHHHHTT--TGGGCSEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----Hh----CCEEEEeCCCCHHHHHhc--CCCCCCEEE
Confidence 35789999874 33333333333358999999976554322 11 235577887542211110 124689988
Q ss_pred EccchhhccCCHHHHHHHHHHHHhcccCCcEEEEEeCCc
Q 018352 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGITPDS 149 (357)
Q Consensus 111 ~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t~pd~ 149 (357)
....-. . .....+....+.+.+. .++...-+.
T Consensus 76 ~~~~~~-----~-~~~~~~~~~~~~~~~~-~ii~~~~~~ 107 (144)
T 2hmt_A 76 VAIGAN-----I-QASTLTTLLLKELDIP-NIWVKAQNY 107 (144)
T ss_dssp ECCCSC-----H-HHHHHHHHHHHHTTCS-EEEEECCSH
T ss_pred ECCCCc-----h-HHHHHHHHHHHHcCCC-eEEEEeCCH
Confidence 654321 1 1222333444556665 665554443
No 466
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=64.92 E-value=26 Score=32.16 Aligned_cols=92 Identities=17% Similarity=0.150 Sum_probs=54.5
Q ss_pred CCEEEEECCCCCh-hH-HHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEE
Q 018352 32 YVTVCDLYCGAGV-DV-DKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 32 ~~~VLDlGCG~G~-~l-~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
..+|.=||+|.=+ .+ ..+...+ .+|++.|.+++.++.+.+. + +.+ ..+ ..+ .-...|+|
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G-~~V~~~dr~~~~~~~l~~~----g----~~~-~~~-----~~e----~~~~aDvV 91 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAG-YALQVWNRTPARAASLAAL----G----ATI-HEQ-----ARA----AARDADIV 91 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTT-CEEEEECSCHHHHHHHHTT----T----CEE-ESS-----HHH----HHTTCSEE
T ss_pred CCEEEEECccHHHHHHHHHHHhCC-CeEEEEcCCHHHHHHHHHC----C----CEe-eCC-----HHH----HHhcCCEE
Confidence 4589999999643 33 3333444 4899999999877655332 1 111 111 111 11457998
Q ss_pred EEccchhhccCCHHHHHHHHH--HHHhcccCCcEEEEEeCC
Q 018352 110 CCFQHLQMCFETEERARRLLQ--NVSSLLKPGGYFLGITPD 148 (357)
Q Consensus 110 ~~~~~lh~~fes~~~~~~~L~--~i~~~LkpGG~fi~t~pd 148 (357)
+..- .+....+.++. .+...+++|..++-+.-.
T Consensus 92 i~~v------p~~~~~~~v~~~~~~~~~l~~~~~vi~~st~ 126 (320)
T 4dll_A 92 VSML------ENGAVVQDVLFAQGVAAAMKPGSLFLDMASI 126 (320)
T ss_dssp EECC------SSHHHHHHHHTTTCHHHHCCTTCEEEECSCC
T ss_pred EEEC------CCHHHHHHHHcchhHHhhCCCCCEEEecCCC
Confidence 7643 23445566666 677788888877755433
No 467
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=64.64 E-value=25 Score=31.33 Aligned_cols=81 Identities=9% Similarity=-0.094 Sum_probs=52.9
Q ss_pred CCEEEEECCCCC--hhH-HHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhh----hhhcCC
Q 018352 32 YVTVCDLYCGAG--VDV-DKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEKAN 104 (357)
Q Consensus 32 ~~~VLDlGCG~G--~~l-~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~----l~~~~~ 104 (357)
+.+||=.|++.| ..+ ..+++.+ .+|+.+|.+++.++.+.+.++... .++.++.+|+.+..-... .....+
T Consensus 4 ~k~~lVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 80 (264)
T 3tfo_A 4 DKVILITGASGGIGEGIARELGVAG-AKILLGARRQARIEAIATEIRDAG--GTALAQVLDVTDRHSVAAFAQAAVDTWG 80 (264)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 457888888765 222 3333334 589999999999888877766542 367889999987432111 111235
Q ss_pred cccEEEEccch
Q 018352 105 QADLVCCFQHL 115 (357)
Q Consensus 105 ~FDlV~~~~~l 115 (357)
..|+++.+.++
T Consensus 81 ~iD~lVnnAG~ 91 (264)
T 3tfo_A 81 RIDVLVNNAGV 91 (264)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999887654
No 468
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=64.58 E-value=30 Score=30.53 Aligned_cols=90 Identities=12% Similarity=0.042 Sum_probs=54.1
Q ss_pred CCEEEEECCCC-ChhH-HHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEE
Q 018352 32 YVTVCDLYCGA-GVDV-DKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 32 ~~~VLDlGCG~-G~~l-~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
.++|.=||||. |..+ ..+...+...++++|.+++.++.+.+++. +.. ..|... .-...|+|
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g-------~~~-~~~~~~---------~~~~~Dvv 72 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVE-------AEY-TTDLAE---------VNPYAKLY 72 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTT-------CEE-ESCGGG---------SCSCCSEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcC-------Cce-eCCHHH---------HhcCCCEE
Confidence 35788999995 4333 33444455348999999988776655431 111 122111 12468998
Q ss_pred EEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 110 CCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 110 ~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
+..- .......+++.+...+++|..++-+
T Consensus 73 i~av-------~~~~~~~v~~~l~~~~~~~~ivv~~ 101 (266)
T 3d1l_A 73 IVSL-------KDSAFAELLQGIVEGKREEALMVHT 101 (266)
T ss_dssp EECC-------CHHHHHHHHHHHHTTCCTTCEEEEC
T ss_pred EEec-------CHHHHHHHHHHHHhhcCCCcEEEEC
Confidence 7643 2334567788888888887665543
No 469
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=64.08 E-value=41 Score=24.94 Aligned_cols=72 Identities=13% Similarity=0.017 Sum_probs=44.1
Q ss_pred CCEEEEECCCC-ChhHH-HHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEE
Q 018352 32 YVTVCDLYCGA-GVDVD-KWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLV 109 (357)
Q Consensus 32 ~~~VLDlGCG~-G~~l~-k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV 109 (357)
..+|+=+|||. |..+. .+...+..+++++|.+++.++.+. .. .+.+...|...... +...-..+|+|
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~~----~~~~~~~d~~~~~~---~~~~~~~~d~v 73 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----RM----GVATKQVDAKDEAG---LAKALGGFDAV 73 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----TT----TCEEEECCTTCHHH---HHHHTTTCSEE
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----hC----CCcEEEecCCCHHH---HHHHHcCCCEE
Confidence 45899999963 32333 333335368999999988776554 11 45678888765321 11112468998
Q ss_pred EEccc
Q 018352 110 CCFQH 114 (357)
Q Consensus 110 ~~~~~ 114 (357)
+....
T Consensus 74 i~~~~ 78 (118)
T 3ic5_A 74 ISAAP 78 (118)
T ss_dssp EECSC
T ss_pred EECCC
Confidence 87654
No 470
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=63.92 E-value=43 Score=29.90 Aligned_cols=83 Identities=8% Similarity=-0.079 Sum_probs=51.0
Q ss_pred CCCEEEEECCCCC--hh-HHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhh----hhhhcC
Q 018352 31 PYVTVCDLYCGAG--VD-VDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKA 103 (357)
Q Consensus 31 ~~~~VLDlGCG~G--~~-l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~----~l~~~~ 103 (357)
.+.+||=.|++.| .. +..+++ ...+|+.+|.+++.++.+.+....... ..+.++.+|+.+..-.. ......
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~-~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 109 (281)
T 4dry_A 32 EGRIALVTGGGTGVGRGIAQALSA-EGYSVVITGRRPDVLDAAAGEIGGRTG-NIVRAVVCDVGDPDQVAALFAAVRAEF 109 (281)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHHHS-SCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHHHHhcCC-CeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4678888887765 22 233333 345899999999988877666543211 13588999998754211 111123
Q ss_pred CcccEEEEccch
Q 018352 104 NQADLVCCFQHL 115 (357)
Q Consensus 104 ~~FDlV~~~~~l 115 (357)
+..|+++.+.+.
T Consensus 110 g~iD~lvnnAG~ 121 (281)
T 4dry_A 110 ARLDLLVNNAGS 121 (281)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 678999887654
No 471
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=63.79 E-value=40 Score=29.10 Aligned_cols=81 Identities=7% Similarity=0.019 Sum_probs=53.2
Q ss_pred CCEEEEECCCCC--h-hHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhh----hhhhcCC
Q 018352 32 YVTVCDLYCGAG--V-DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKAN 104 (357)
Q Consensus 32 ~~~VLDlGCG~G--~-~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~----~l~~~~~ 104 (357)
+.+||=.|++.| . .+..+++.+ .+|+++|.+++.++...+..+..+ .++.++.+|+.+..-.. ......+
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (247)
T 3lyl_A 5 EKVALVTGASRGIGFEVAHALASKG-ATVVGTATSQASAEKFENSMKEKG--FKARGLVLNISDIESIQNFFAEIKAENL 81 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 567888887655 1 223333334 589999999998888777766542 36889999998743211 1222346
Q ss_pred cccEEEEccch
Q 018352 105 QADLVCCFQHL 115 (357)
Q Consensus 105 ~FDlV~~~~~l 115 (357)
..|+++.+.+.
T Consensus 82 ~id~li~~Ag~ 92 (247)
T 3lyl_A 82 AIDILVNNAGI 92 (247)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999877654
No 472
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=63.64 E-value=58 Score=28.79 Aligned_cols=82 Identities=15% Similarity=0.014 Sum_probs=52.2
Q ss_pred CCCEEEEECCCCC--h-hHHHHHHhcCCeEEEEeC-------------ChHHHHHHHHHhHhcCCCceeEEEEcCCCCCc
Q 018352 31 PYVTVCDLYCGAG--V-DVDKWETALIANYIGIDV-------------ATSGIGEARDTWENQRKNFIAEFFEADPCAEN 94 (357)
Q Consensus 31 ~~~~VLDlGCG~G--~-~l~k~~~~~~~~v~GiDi-------------S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~ 94 (357)
.+.+||=.|++.| . .+..+++.+ .+|+++|. +++.++.+.+..+..+ .++.++.+|+.+..
T Consensus 14 ~gk~~lVTGas~gIG~a~a~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~ 90 (280)
T 3pgx_A 14 QGRVAFITGAARGQGRSHAVRLAAEG-ADIIACDICAPVSASVTYAPASPEDLDETARLVEDQG--RKALTRVLDVRDDA 90 (280)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTT--CCEEEEECCTTCHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeccccccccccccccCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHH
Confidence 4578898898776 2 223333334 58999998 6777777766665442 36888999998743
Q ss_pred hhhh----hhhcCCcccEEEEccch
Q 018352 95 FETQ----MQEKANQADLVCCFQHL 115 (357)
Q Consensus 95 ~~~~----l~~~~~~FDlV~~~~~l 115 (357)
-... .....+..|+++.+.+.
T Consensus 91 ~v~~~~~~~~~~~g~id~lvnnAg~ 115 (280)
T 3pgx_A 91 ALRELVADGMEQFGRLDVVVANAGV 115 (280)
T ss_dssp HHHHHHHHHHHHHCCCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCC
Confidence 2111 11123579999887654
No 473
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=63.63 E-value=42 Score=29.55 Aligned_cols=83 Identities=10% Similarity=-0.076 Sum_probs=49.2
Q ss_pred CCEEEEECCCCC--hhH-HHHHHhcCCeEEEEeCChHHHHHHHHHhHhc-CCCceeEEEEcCCCCCchhhh----hhhcC
Q 018352 32 YVTVCDLYCGAG--VDV-DKWETALIANYIGIDVATSGIGEARDTWENQ-RKNFIAEFFEADPCAENFETQ----MQEKA 103 (357)
Q Consensus 32 ~~~VLDlGCG~G--~~l-~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~-~~~~~v~f~~~D~~~~~~~~~----l~~~~ 103 (357)
+.+||=.|++.| ..+ ..+++.+ .+|+++|.+++.++.+.+..... ....++.++.+|+.+..-... .....
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (278)
T 1spx_A 6 EKVAIITGSSNGIGRATAVLFAREG-AKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF 84 (278)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHc
Confidence 457888887654 222 2333334 58999999998887766555211 112367889999987432111 11122
Q ss_pred CcccEEEEccch
Q 018352 104 NQADLVCCFQHL 115 (357)
Q Consensus 104 ~~FDlV~~~~~l 115 (357)
+..|+++.+.+.
T Consensus 85 g~id~lv~~Ag~ 96 (278)
T 1spx_A 85 GKLDILVNNAGA 96 (278)
T ss_dssp SCCCEEEECCC-
T ss_pred CCCCEEEECCCC
Confidence 478999887654
No 474
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=63.44 E-value=13 Score=35.86 Aligned_cols=102 Identities=10% Similarity=-0.003 Sum_probs=58.9
Q ss_pred CCCCCEEEEECC-C-CChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCC-------------
Q 018352 29 SHPYVTVCDLYC-G-AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAE------------- 93 (357)
Q Consensus 29 ~~~~~~VLDlGC-G-~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~------------- 93 (357)
+.++.+||=.|+ | -|..+..+++....++++++.+++-++.+++. +...-+.....|....
T Consensus 218 ~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~l----Ga~~~i~~~~~~~~~~~~~~~~~~~~~~~ 293 (447)
T 4a0s_A 218 MKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRAL----GCDLVINRAELGITDDIADDPRRVVETGR 293 (447)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----TCCCEEEHHHHTCCTTGGGCHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CCCEEEecccccccccccccccccchhhh
Confidence 457899999998 3 34556666666566999999999888877542 1100011011111100
Q ss_pred chhhhhhh-cCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 94 NFETQMQE-KANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 94 ~~~~~l~~-~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
.+...+.. ....+|+|+...+- ..++...++|++||.++..
T Consensus 294 ~~~~~v~~~~g~g~Dvvid~~G~-----------~~~~~~~~~l~~~G~iv~~ 335 (447)
T 4a0s_A 294 KLAKLVVEKAGREPDIVFEHTGR-----------VTFGLSVIVARRGGTVVTC 335 (447)
T ss_dssp HHHHHHHHHHSSCCSEEEECSCH-----------HHHHHHHHHSCTTCEEEES
T ss_pred HHHHHHHHHhCCCceEEEECCCc-----------hHHHHHHHHHhcCCEEEEE
Confidence 00111110 13579999765421 1356677899999999866
No 475
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=63.41 E-value=21 Score=33.56 Aligned_cols=96 Identities=13% Similarity=0.003 Sum_probs=57.6
Q ss_pred CCCCEEEEECCC--CChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhh-cCCcc
Q 018352 30 HPYVTVCDLYCG--AGVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQE-KANQA 106 (357)
Q Consensus 30 ~~~~~VLDlGCG--~G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~-~~~~F 106 (357)
.++.+||=+|++ .|..+..+++....+++++. |++-++.+++.-. . .++ |....++...+.. ..+.+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa------~-~vi--~~~~~~~~~~v~~~t~g~~ 232 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSRGA------E-EVF--DYRAPNLAQTIRTYTKNNL 232 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTC------S-EEE--ETTSTTHHHHHHHHTTTCC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHcCC------c-EEE--ECCCchHHHHHHHHccCCc
Confidence 678899999984 46666677776555888885 8877776654211 1 122 2223333332221 23459
Q ss_pred cEEEEccchhhccCCHHHHHHHHHHHHhcc-cCCcEEEEE
Q 018352 107 DLVCCFQHLQMCFETEERARRLLQNVSSLL-KPGGYFLGI 145 (357)
Q Consensus 107 DlV~~~~~lh~~fes~~~~~~~L~~i~~~L-kpGG~fi~t 145 (357)
|+|+-.-+ .. ..+..+.++| ++||+++..
T Consensus 233 d~v~d~~g------~~----~~~~~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 233 RYALDCIT------NV----ESTTFCFAAIGRAGGHYVSL 262 (371)
T ss_dssp CEEEESSC------SH----HHHHHHHHHSCTTCEEEEES
T ss_pred cEEEECCC------ch----HHHHHHHHHhhcCCCEEEEE
Confidence 99976442 11 2355566778 699998865
No 476
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=63.40 E-value=28 Score=30.60 Aligned_cols=82 Identities=11% Similarity=-0.013 Sum_probs=53.6
Q ss_pred CCCEEEEECCCCC--h-hHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhh----hhhcC
Q 018352 31 PYVTVCDLYCGAG--V-DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEKA 103 (357)
Q Consensus 31 ~~~~VLDlGCG~G--~-~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~----l~~~~ 103 (357)
.+.+||=.|++.| . .+..+++.+ .+|+.+|.+.+.++...+.++..+ .++.++.+|+.+..-... .....
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 87 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKAG-ASVVVTDLKSEGAEAVAAAIRQAG--GKAIGLECNVTDEQHREAVIKAALDQF 87 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4678888888765 1 223343444 489999999998887777665442 368889999987432111 11123
Q ss_pred CcccEEEEccch
Q 018352 104 NQADLVCCFQHL 115 (357)
Q Consensus 104 ~~FDlV~~~~~l 115 (357)
+..|+++.+.+.
T Consensus 88 g~id~lv~nAg~ 99 (256)
T 3gaf_A 88 GKITVLVNNAGG 99 (256)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 579999887654
No 477
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=63.27 E-value=49 Score=29.22 Aligned_cols=112 Identities=10% Similarity=0.027 Sum_probs=60.8
Q ss_pred CCEEEEECCC--CC--hhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhh----hhhhcC
Q 018352 32 YVTVCDLYCG--AG--VDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKA 103 (357)
Q Consensus 32 ~~~VLDlGCG--~G--~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~----~l~~~~ 103 (357)
+.+||=.|++ .| ..+.+.+.....+|+++|.++. .+...+....... .+.++.+|+.+..-.. ......
T Consensus 6 ~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~ 82 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELN--SPYVYELDVSKEEHFKSLYNSVKKDL 82 (275)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcC--CcEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4678888875 33 2333333334458999998876 2222222222111 3678899998743211 111123
Q ss_pred CcccEEEEccchhhc------c--CCHHHHH-----------HHHHHHHhcccCCcEEEEEe
Q 018352 104 NQADLVCCFQHLQMC------F--ETEERAR-----------RLLQNVSSLLKPGGYFLGIT 146 (357)
Q Consensus 104 ~~FDlV~~~~~lh~~------f--es~~~~~-----------~~L~~i~~~LkpGG~fi~t~ 146 (357)
+..|+++.+.+.... + .+.++.+ .+++.+...++.+|.++.+.
T Consensus 83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 144 (275)
T 2pd4_A 83 GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLS 144 (275)
T ss_dssp SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEe
Confidence 578999887654321 1 1233332 34455666666678887663
No 478
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=63.23 E-value=55 Score=29.19 Aligned_cols=85 Identities=18% Similarity=0.267 Sum_probs=52.1
Q ss_pred CEEEEECC-CC-ChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEEE
Q 018352 33 VTVCDLYC-GA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVC 110 (357)
Q Consensus 33 ~~VLDlGC-G~-G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~ 110 (357)
.+|.=||| |. |..+...+.....+|+++|.+++.++.+.+ .+ +.. .+. .. .-...|+|+
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~----~g----~~~--~~~-----~~----~~~~aDvVi 72 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG----MG----IPL--TDG-----DG----WIDEADVVV 72 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH----TT----CCC--CCS-----SG----GGGTCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh----cC----CCc--CCH-----HH----HhcCCCEEE
Confidence 48999999 86 444333333333489999999887776544 11 111 111 11 124689997
Q ss_pred EccchhhccCCHHHHHHHHHHHHhcccCCcEEE
Q 018352 111 CFQHLQMCFETEERARRLLQNVSSLLKPGGYFL 143 (357)
Q Consensus 111 ~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi 143 (357)
..- .......+++.+...+++|..++
T Consensus 73 ~av-------~~~~~~~v~~~l~~~l~~~~ivv 98 (286)
T 3c24_A 73 LAL-------PDNIIEKVAEDIVPRVRPGTIVL 98 (286)
T ss_dssp ECS-------CHHHHHHHHHHHGGGSCTTCEEE
T ss_pred EcC-------CchHHHHHHHHHHHhCCCCCEEE
Confidence 643 23446778888888888876544
No 479
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=62.77 E-value=31 Score=30.76 Aligned_cols=82 Identities=9% Similarity=-0.058 Sum_probs=52.9
Q ss_pred CCCEEEEECCCCC--h-hHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhh----hhhhcC
Q 018352 31 PYVTVCDLYCGAG--V-DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKA 103 (357)
Q Consensus 31 ~~~~VLDlGCG~G--~-~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~----~l~~~~ 103 (357)
.+.+||=.|++.| . .+..+++.+ .+|+++|.+++.++.+.+.++..+ .++.++.+|+.+..-.. ......
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 99 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAARG-IAVYGCARDAKNVSAAVDGLRAAG--HDVDGSSCDVTSTDEVHAAVAAAVERF 99 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHTTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4578999998766 2 223333334 589999999998888777765442 36889999998743211 111123
Q ss_pred CcccEEEEccch
Q 018352 104 NQADLVCCFQHL 115 (357)
Q Consensus 104 ~~FDlV~~~~~l 115 (357)
+..|+++.+.+.
T Consensus 100 g~id~lv~nAg~ 111 (279)
T 3sju_A 100 GPIGILVNSAGR 111 (279)
T ss_dssp CSCCEEEECCCC
T ss_pred CCCcEEEECCCC
Confidence 578999887654
No 480
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=62.62 E-value=1.4e+02 Score=30.46 Aligned_cols=116 Identities=15% Similarity=0.229 Sum_probs=68.6
Q ss_pred eeEEEEcCCCCCc-hhhhhhh----cCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE-e--CC--chH
Q 018352 82 IAEFFEADPCAEN-FETQMQE----KANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI-T--PD--SST 151 (357)
Q Consensus 82 ~v~f~~~D~~~~~-~~~~l~~----~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t-~--pd--~~~ 151 (357)
+..++.+|+.... +...+.. ....--++++-.++.| + +.+...++|+.+++. ++|.|+.. . |. .+.
T Consensus 189 ~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Y-l-~~~~~~~ll~~~~~~--~~~~~~~~e~~~~~~~~d~ 264 (695)
T 2zwa_A 189 KYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAY-M-KPERSDSIIEATSKM--ENSHFIILEQLIPKGPFEP 264 (695)
T ss_dssp SEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGG-S-CHHHHHHHHHHHHTS--SSEEEEEEEECCTTCTTSH
T ss_pred CeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEE-c-CHHHHHHHHHHHhhC--CCceEEEEEeecCCCCCCh
Confidence 5688999998742 2222321 1233445677778999 5 678899999999964 67777664 2 31 122
Q ss_pred HHHHHHHhHHhhhcCCCCCCCCCCCCccCCccEEEEeecccCCCCccceeeEeEEcCCcccCcccccchHHHHHHHHHcC
Q 018352 152 IWAKYQKNVEAYHNRSSSMKPNLVPNCIRSESYVITFEVEEEKFPLFGKKYQLKFANDISAETQCLVHFPSLIRLAREAG 231 (357)
Q Consensus 152 i~~~~~~~~~~~~~~~~~~~~~~fgn~i~~~~y~i~f~~~~~~~p~fG~~Y~f~L~~~~~~~~eylv~~~~l~~la~e~G 231 (357)
.-+...++... . | .|.-+ .. ..-+.+...+.+.++|
T Consensus 265 f~~~m~~~~~~---~---------g------------------~~l~~----------~~----~~~~~~~~~~~~~~~G 300 (695)
T 2zwa_A 265 FSKQMLAHFKR---N---------D------------------SPLQS----------VL----KYNTIESQVQRFNKLG 300 (695)
T ss_dssp HHHHHHHHHHH---T---------T------------------CCCCG----------GG----TCCSHHHHHHHHHHTT
T ss_pred HHHHHHHHHHH---c---------C------------------CCCCc----------cc----cCCCHHHHHHHHHHCC
Confidence 22222222110 0 0 01000 11 1125667888899999
Q ss_pred CEEEEecCchHHHH
Q 018352 232 LEYVEIQNLNEFYD 245 (357)
Q Consensus 232 lelv~~~~f~~f~~ 245 (357)
++.+...++.++|+
T Consensus 301 w~~v~~~~~~~~y~ 314 (695)
T 2zwa_A 301 FAYVNVGDMFQLWE 314 (695)
T ss_dssp CCEEEEEEHHHHHH
T ss_pred CCCcceeeHHHHHh
Confidence 99999999999984
No 481
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=62.59 E-value=58 Score=27.76 Aligned_cols=83 Identities=7% Similarity=-0.053 Sum_probs=50.9
Q ss_pred CCEEEEECCCCC--h-hHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhh----hhhcCC
Q 018352 32 YVTVCDLYCGAG--V-DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEKAN 104 (357)
Q Consensus 32 ~~~VLDlGCG~G--~-~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~----l~~~~~ 104 (357)
+.+||=.|++.| . .+..+++.+ .+|+.++.+.+.++.+.+...... ..++.++.+|+.+..-... .....+
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDG-YALALGARSVDRLEKIAHELMQEQ-GVEVFYHHLDVSKAESVEEFSKKVLERFG 79 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhhc-CCeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence 456788887655 2 223333334 589999999988887766554211 2368899999987432111 111124
Q ss_pred cccEEEEccchh
Q 018352 105 QADLVCCFQHLQ 116 (357)
Q Consensus 105 ~FDlV~~~~~lh 116 (357)
..|+++.+.++.
T Consensus 80 ~id~li~~Ag~~ 91 (235)
T 3l77_A 80 DVDVVVANAGLG 91 (235)
T ss_dssp SCSEEEECCCCC
T ss_pred CCCEEEECCccc
Confidence 799998876543
No 482
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=62.58 E-value=53 Score=28.79 Aligned_cols=95 Identities=8% Similarity=-0.119 Sum_probs=53.7
Q ss_pred CEEEEECCCC-ChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCcccEEEE
Q 018352 33 VTVCDLYCGA-GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQADLVCC 111 (357)
Q Consensus 33 ~~VLDlGCG~-G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FDlV~~ 111 (357)
++||=.|||. |..+.+.+.....+|++++-++...+... .. .++++.+|+.+.. ...+|+|+.
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~----~~~~~~~D~~d~~--------~~~~d~vi~ 69 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAIR----AS----GAEPLLWPGEEPS--------LDGVTHLLI 69 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH----HT----TEEEEESSSSCCC--------CTTCCEEEE
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh----hC----CCeEEEecccccc--------cCCCCEEEE
Confidence 5899999632 33333333334458999999987554332 12 5788999987733 256899987
Q ss_pred ccchhhccCCHHHHHHHHHHHHhcccCCcEEEEE
Q 018352 112 FQHLQMCFETEERARRLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 112 ~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi~t 145 (357)
..+... . .....+.+++.+.+.-..-+.|+.+
T Consensus 70 ~a~~~~-~-~~~~~~~l~~a~~~~~~~~~~~v~~ 101 (286)
T 3ius_A 70 STAPDS-G-GDPVLAALGDQIAARAAQFRWVGYL 101 (286)
T ss_dssp CCCCBT-T-BCHHHHHHHHHHHHTGGGCSEEEEE
T ss_pred CCCccc-c-ccHHHHHHHHHHHhhcCCceEEEEe
Confidence 665433 1 1222344444444421222456544
No 483
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=62.02 E-value=37 Score=30.22 Aligned_cols=82 Identities=15% Similarity=0.033 Sum_probs=54.0
Q ss_pred CCCEEEEECCCCC--h-hHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhh----hhhhcC
Q 018352 31 PYVTVCDLYCGAG--V-DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKA 103 (357)
Q Consensus 31 ~~~~VLDlGCG~G--~-~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~----~l~~~~ 103 (357)
.+.+||=.|++.| . .+..+++.+ .+|+.+|.+++.++.+.+.++... .++.++.+|+.+..-.. ......
T Consensus 25 ~gk~~lVTGas~gIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (271)
T 4ibo_A 25 GGRTALVTGSSRGLGRAMAEGLAVAG-ARILINGTDPSRVAQTVQEFRNVG--HDAEAVAFDVTSESEIIEAFARLDEQG 101 (271)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTT-CEEEECCSCHHHHHHHHHHHHHTT--CCEEECCCCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence 4678888887765 1 223333334 589999999998888777765542 26888999998743211 112234
Q ss_pred CcccEEEEccch
Q 018352 104 NQADLVCCFQHL 115 (357)
Q Consensus 104 ~~FDlV~~~~~l 115 (357)
+..|+++.+.++
T Consensus 102 g~iD~lv~nAg~ 113 (271)
T 4ibo_A 102 IDVDILVNNAGI 113 (271)
T ss_dssp CCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 679999887654
No 484
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=61.28 E-value=38 Score=29.99 Aligned_cols=78 Identities=18% Similarity=0.104 Sum_probs=46.7
Q ss_pred CCEEEEECCCC-ChhH-HHHHHhcCCeEEEEeCCh-------------------HHHHHHHHHhHhcCCCceeEEEEcCC
Q 018352 32 YVTVCDLYCGA-GVDV-DKWETALIANYIGIDVAT-------------------SGIGEARDTWENQRKNFIAEFFEADP 90 (357)
Q Consensus 32 ~~~VLDlGCG~-G~~l-~k~~~~~~~~v~GiDiS~-------------------~~l~~A~~r~~~~~~~~~v~f~~~D~ 90 (357)
+.+||=+|||. |..+ ..++..+.++++.+|.+. .-.+.+.+++...+...++..+..++
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 110 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL 110 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccC
Confidence 46899999984 4333 344455888999999886 44566666665543333455555544
Q ss_pred CCCchhhhhhhcCCcccEEEEcc
Q 018352 91 CAENFETQMQEKANQADLVCCFQ 113 (357)
Q Consensus 91 ~~~~~~~~l~~~~~~FDlV~~~~ 113 (357)
........ -..+|+|+...
T Consensus 111 ~~~~~~~~----~~~~DvVi~~~ 129 (249)
T 1jw9_B 111 DDAELAAL----IAEHDLVLDCT 129 (249)
T ss_dssp CHHHHHHH----HHTSSEEEECC
T ss_pred CHhHHHHH----HhCCCEEEEeC
Confidence 32222111 13689998643
No 485
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=61.19 E-value=32 Score=30.02 Aligned_cols=83 Identities=10% Similarity=-0.089 Sum_probs=48.8
Q ss_pred CCCEEEEECCCCC--hhHHHHHHhcCCeEEEEeC-ChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhh-h---hhcC
Q 018352 31 PYVTVCDLYCGAG--VDVDKWETALIANYIGIDV-ATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ-M---QEKA 103 (357)
Q Consensus 31 ~~~~VLDlGCG~G--~~l~k~~~~~~~~v~GiDi-S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~-l---~~~~ 103 (357)
.+.+||=.|++.| ..+.+.+.....+|++++- ++..++...+..+..+ .++.++.+|+.+..-... + ....
T Consensus 20 ~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 97 (274)
T 1ja9_A 20 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLG--AQGVAIQADISKPSEVVALFDKAVSHF 97 (274)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 3568888886543 2222333333458999998 7777766555554332 267889999987432111 1 1112
Q ss_pred CcccEEEEccch
Q 018352 104 NQADLVCCFQHL 115 (357)
Q Consensus 104 ~~FDlV~~~~~l 115 (357)
+..|+|+.+.+.
T Consensus 98 ~~~d~vi~~Ag~ 109 (274)
T 1ja9_A 98 GGLDFVMSNSGM 109 (274)
T ss_dssp SCEEEEECCCCC
T ss_pred CCCCEEEECCCC
Confidence 478999876543
No 486
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=61.09 E-value=48 Score=29.17 Aligned_cols=83 Identities=5% Similarity=-0.155 Sum_probs=49.9
Q ss_pred CCEEEEECCCCC--hhHHHHHHhcCCeEEEEeC-ChHHHHHHHHHhHhcCCCceeEEEEcCCCCC----chhhh----hh
Q 018352 32 YVTVCDLYCGAG--VDVDKWETALIANYIGIDV-ATSGIGEARDTWENQRKNFIAEFFEADPCAE----NFETQ----MQ 100 (357)
Q Consensus 32 ~~~VLDlGCG~G--~~l~k~~~~~~~~v~GiDi-S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~----~~~~~----l~ 100 (357)
+.+||=.|++.| ..+.+.+.....+|+++|. +++.++.+.+.++... ..++.++.+|+.+. .-... ..
T Consensus 11 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 89 (276)
T 1mxh_A 11 CPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR-AGSAVLCKGDLSLSSSLLDCCEDIIDCSF 89 (276)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhc-CCceEEEeccCCCccccHHHHHHHHHHHH
Confidence 467887787655 1222222233458999999 8887776666554320 12678899999876 32111 11
Q ss_pred hcCCcccEEEEccch
Q 018352 101 EKANQADLVCCFQHL 115 (357)
Q Consensus 101 ~~~~~FDlV~~~~~l 115 (357)
...+..|+++.+.++
T Consensus 90 ~~~g~id~lv~nAg~ 104 (276)
T 1mxh_A 90 RAFGRCDVLVNNASA 104 (276)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HhcCCCCEEEECCCC
Confidence 122578999887654
No 487
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=60.69 E-value=36 Score=30.77 Aligned_cols=95 Identities=12% Similarity=0.034 Sum_probs=56.7
Q ss_pred CEEEEECCCCCh--hHHHHHHhcCCeEEEEeCChHHHHHHHHHhHh-------cCCC--------------ceeEEEEcC
Q 018352 33 VTVCDLYCGAGV--DVDKWETALIANYIGIDVATSGIGEARDTWEN-------QRKN--------------FIAEFFEAD 89 (357)
Q Consensus 33 ~~VLDlGCG~G~--~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~-------~~~~--------------~~v~f~~~D 89 (357)
.+|.=||+|.=| .+..++.++. +|+++|.+++.++.++++... .+.. .++.+ ..|
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~-~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~-~~~ 93 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIAT-STD 93 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEE-ESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEE-ecC
Confidence 579999999733 3344444454 899999999999887654321 1100 01111 111
Q ss_pred CCCCchhhhhhhcCCcccEEEEccchhhccCCHHHHHHHHHHHHhcccCCcEEE
Q 018352 90 PCAENFETQMQEKANQADLVCCFQHLQMCFETEERARRLLQNVSSLLKPGGYFL 143 (357)
Q Consensus 90 ~~~~~~~~~l~~~~~~FDlV~~~~~lh~~fes~~~~~~~L~~i~~~LkpGG~fi 143 (357)
..+ .-...|+|+..- .++.+..+.+++.+...++++.+++
T Consensus 94 -----~~~----~~~~aD~Vi~av-----p~~~~~~~~v~~~l~~~~~~~~iv~ 133 (302)
T 1f0y_A 94 -----AAS----VVHSTDLVVEAI-----VENLKVKNELFKRLDKFAAEHTIFA 133 (302)
T ss_dssp -----HHH----HTTSCSEEEECC-----CSCHHHHHHHHHHHTTTSCTTCEEE
T ss_pred -----HHH----hhcCCCEEEEcC-----cCcHHHHHHHHHHHHhhCCCCeEEE
Confidence 111 124689987643 3344445678889999998877554
No 488
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=60.69 E-value=54 Score=29.11 Aligned_cols=79 Identities=11% Similarity=-0.116 Sum_probs=50.4
Q ss_pred CCCEEEEECCCCC--h-hHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhh----hhhcC
Q 018352 31 PYVTVCDLYCGAG--V-DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEKA 103 (357)
Q Consensus 31 ~~~~VLDlGCG~G--~-~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~----l~~~~ 103 (357)
.+.+||=.|++.| . .+..+++.+ .+|+.+|.+.+.++...+.+. .++.++.+|+.+..-... .....
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 100 (272)
T 4dyv_A 27 GKKIAIVTGAGSGVGRAVAVALAGAG-YGVALAGRRLDALQETAAEIG-----DDALCVPTDVTDPDSVRALFTATVEKF 100 (272)
T ss_dssp -CCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHT-----SCCEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHhC-----CCeEEEEecCCCHHHHHHHHHHHHHHc
Confidence 3567888887665 2 223333344 489999999988877766553 257889999987432111 11123
Q ss_pred CcccEEEEccch
Q 018352 104 NQADLVCCFQHL 115 (357)
Q Consensus 104 ~~FDlV~~~~~l 115 (357)
+..|+++.+.++
T Consensus 101 g~iD~lVnnAg~ 112 (272)
T 4dyv_A 101 GRVDVLFNNAGT 112 (272)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 579999887654
No 489
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=60.64 E-value=24 Score=31.57 Aligned_cols=82 Identities=11% Similarity=-0.039 Sum_probs=53.8
Q ss_pred CCCEEEEECCCCC--h-hHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhh----hhhcC
Q 018352 31 PYVTVCDLYCGAG--V-DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEKA 103 (357)
Q Consensus 31 ~~~~VLDlGCG~G--~-~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~----l~~~~ 103 (357)
.+.+||=.|++.| . .+..+++.+ .+|+.+|.+++.++...+.++... .++.++.+|+.+..-... .....
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 107 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYAEAG-AQVAVAARHSDALQVVADEIAGVG--GKALPIRCDVTQPDQVRGMLDQMTGEL 107 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESSGGGGHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4678998898765 1 223333334 589999999988887777665542 267889999987542111 11123
Q ss_pred CcccEEEEccch
Q 018352 104 NQADLVCCFQHL 115 (357)
Q Consensus 104 ~~FDlV~~~~~l 115 (357)
+..|+++.+.+.
T Consensus 108 g~iD~lvnnAg~ 119 (276)
T 3r1i_A 108 GGIDIAVCNAGI 119 (276)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 579999887654
No 490
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=60.37 E-value=31 Score=30.86 Aligned_cols=79 Identities=16% Similarity=-0.034 Sum_probs=50.6
Q ss_pred CCCEEEEECCCCC--h-hHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhhhhhcCCccc
Q 018352 31 PYVTVCDLYCGAG--V-DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQMQEKANQAD 107 (357)
Q Consensus 31 ~~~~VLDlGCG~G--~-~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~l~~~~~~FD 107 (357)
.+.+||=.|++.| . .+..+++.+ .+|+++|.++..++.+.+.+ ..++.++.+|+.+..-...+-..-+..|
T Consensus 15 ~gk~vlVTGas~gIG~~~a~~L~~~G-~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~v~~~~~~~~~iD 88 (291)
T 3rd5_A 15 AQRTVVITGANSGLGAVTARELARRG-ATVIMAVRDTRKGEAAARTM-----AGQVEVRELDLQDLSSVRRFADGVSGAD 88 (291)
T ss_dssp TTCEEEEECCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHTTS-----SSEEEEEECCTTCHHHHHHHHHTCCCEE
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHh-----cCCeeEEEcCCCCHHHHHHHHHhcCCCC
Confidence 4678888887765 2 223333334 58999999988777665443 2368899999987443222222225789
Q ss_pred EEEEccch
Q 018352 108 LVCCFQHL 115 (357)
Q Consensus 108 lV~~~~~l 115 (357)
+++.+.++
T Consensus 89 ~lv~nAg~ 96 (291)
T 3rd5_A 89 VLINNAGI 96 (291)
T ss_dssp EEEECCCC
T ss_pred EEEECCcC
Confidence 99877654
No 491
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=59.96 E-value=86 Score=27.17 Aligned_cols=83 Identities=11% Similarity=0.026 Sum_probs=51.8
Q ss_pred CCCEEEEECCCCC--h-hHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCC--CCCchh----hhhhh
Q 018352 31 PYVTVCDLYCGAG--V-DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADP--CAENFE----TQMQE 101 (357)
Q Consensus 31 ~~~~VLDlGCG~G--~-~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~--~~~~~~----~~l~~ 101 (357)
.+.+||=.|++.| . .+..+++.+ .+|+.+|.+++.++.+.+.+.... ..++.++.+|+ .+..-. .....
T Consensus 11 ~~k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (252)
T 3f1l_A 11 NDRIILVTGASDGIGREAAMTYARYG-ATVILLGRNEEKLRQVASHINEET-GRQPQWFILDLLTCTSENCQQLAQRIAV 88 (252)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHH-SCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhhc-CCCceEEEEecccCCHHHHHHHHHHHHH
Confidence 3568888898765 2 223333334 489999999998887766654421 11567899998 442211 11222
Q ss_pred cCCcccEEEEccch
Q 018352 102 KANQADLVCCFQHL 115 (357)
Q Consensus 102 ~~~~FDlV~~~~~l 115 (357)
..+..|+++.+.+.
T Consensus 89 ~~g~id~lv~nAg~ 102 (252)
T 3f1l_A 89 NYPRLDGVLHNAGL 102 (252)
T ss_dssp HCSCCSEEEECCCC
T ss_pred hCCCCCEEEECCcc
Confidence 34679999887654
No 492
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=59.80 E-value=53 Score=28.93 Aligned_cols=83 Identities=11% Similarity=0.005 Sum_probs=52.1
Q ss_pred CCCEEEEECCCCC--hhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhh----hhhhcCC
Q 018352 31 PYVTVCDLYCGAG--VDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEKAN 104 (357)
Q Consensus 31 ~~~~VLDlGCG~G--~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~----~l~~~~~ 104 (357)
.+.+||=.|++.| ..+.+.+.....+|+++|.++..++...+.++..+ .++.++.+|+.+..-.. .+....+
T Consensus 30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 107 (272)
T 1yb1_A 30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG--AKVHTFVVDCSNREDIYSSAKKVKAEIG 107 (272)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcC--CeEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 4578998887654 22222223334589999999988877666655432 26889999998743211 1111235
Q ss_pred cccEEEEccch
Q 018352 105 QADLVCCFQHL 115 (357)
Q Consensus 105 ~FDlV~~~~~l 115 (357)
.+|+|+.+.+.
T Consensus 108 ~iD~li~~Ag~ 118 (272)
T 1yb1_A 108 DVSILVNNAGV 118 (272)
T ss_dssp CCSEEEECCCC
T ss_pred CCcEEEECCCc
Confidence 79999887654
No 493
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=59.70 E-value=84 Score=27.53 Aligned_cols=82 Identities=6% Similarity=-0.205 Sum_probs=49.6
Q ss_pred CCCEEEEECCCCC--h-hHHHHHHhcCCeEEEE-eCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhh----hhhc
Q 018352 31 PYVTVCDLYCGAG--V-DVDKWETALIANYIGI-DVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEK 102 (357)
Q Consensus 31 ~~~~VLDlGCG~G--~-~l~k~~~~~~~~v~Gi-DiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~----l~~~ 102 (357)
.+.+||=.|++.| . .+..+++.+. +|+.+ +.+.+.++...+...... .++.++.+|+.+..-... +...
T Consensus 25 ~~k~vlITGas~gIG~a~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~ 101 (272)
T 4e3z_A 25 DTPVVLVTGGSRGIGAAVCRLAARQGW-RVGVNYAANREAADAVVAAITESG--GEAVAIPGDVGNAADIAAMFSAVDRQ 101 (272)
T ss_dssp CSCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCChhHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 4568888887765 1 2233333444 67665 778777776666655432 378899999987432111 1112
Q ss_pred CCcccEEEEccch
Q 018352 103 ANQADLVCCFQHL 115 (357)
Q Consensus 103 ~~~FDlV~~~~~l 115 (357)
.+..|+++.+.+.
T Consensus 102 ~g~id~li~nAg~ 114 (272)
T 4e3z_A 102 FGRLDGLVNNAGI 114 (272)
T ss_dssp HSCCCEEEECCCC
T ss_pred CCCCCEEEECCCC
Confidence 2578999887654
No 494
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=59.54 E-value=73 Score=27.71 Aligned_cols=79 Identities=15% Similarity=-0.022 Sum_probs=47.7
Q ss_pred CCEEEEECCCCC--hhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhh----hhhcCCc
Q 018352 32 YVTVCDLYCGAG--VDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEKANQ 105 (357)
Q Consensus 32 ~~~VLDlGCG~G--~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~----l~~~~~~ 105 (357)
+.+||=.|++.| ..+.+.+.....+|+.+|.+++.++...+.+. .++.++.+|+.+..-... .....+.
T Consensus 5 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 79 (254)
T 1hdc_A 5 GKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELG-----DAARYQHLDVTIEEDWQRVVAYAREEFGS 79 (254)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTG-----GGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-----CceeEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 567888887665 22222223344589999999887765544331 257889999976432111 1112247
Q ss_pred ccEEEEccch
Q 018352 106 ADLVCCFQHL 115 (357)
Q Consensus 106 FDlV~~~~~l 115 (357)
.|+++.+.+.
T Consensus 80 iD~lv~nAg~ 89 (254)
T 1hdc_A 80 VDGLVNNAGI 89 (254)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999887654
No 495
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=59.43 E-value=32 Score=31.63 Aligned_cols=61 Identities=16% Similarity=0.136 Sum_probs=38.4
Q ss_pred CCCEEEEECCCC-ChhH-HHHHHhcCCeEEEEeCCh------------------HHHHHHHHHhHhcCCCceeEEEEcCC
Q 018352 31 PYVTVCDLYCGA-GVDV-DKWETALIANYIGIDVAT------------------SGIGEARDTWENQRKNFIAEFFEADP 90 (357)
Q Consensus 31 ~~~~VLDlGCG~-G~~l-~k~~~~~~~~v~GiDiS~------------------~~l~~A~~r~~~~~~~~~v~f~~~D~ 90 (357)
...+||=+|||. |..+ ..++.++.++++.+|.+. .=.+.|+++++..+...+++.+..++
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~~l 114 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNYNI 114 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECCCT
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEecccC
Confidence 357999999994 5444 445556999999999765 22344555555544333555555555
Q ss_pred C
Q 018352 91 C 91 (357)
Q Consensus 91 ~ 91 (357)
.
T Consensus 115 ~ 115 (292)
T 3h8v_A 115 T 115 (292)
T ss_dssp T
T ss_pred C
Confidence 4
No 496
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=59.32 E-value=67 Score=28.42 Aligned_cols=82 Identities=7% Similarity=-0.130 Sum_probs=46.3
Q ss_pred CCCEEEEECCC--C--ChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhh----hhhhc
Q 018352 31 PYVTVCDLYCG--A--GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFET----QMQEK 102 (357)
Q Consensus 31 ~~~~VLDlGCG--~--G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~----~l~~~ 102 (357)
.+.+||=.|++ . |..+.+.+.....+|+.+|.+. .+.+.+...... .++.++.+|+.+..-.. .+...
T Consensus 25 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~ 100 (280)
T 3nrc_A 25 AGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEF--NPAAVLPCDVISDQEIKDLFVELGKV 100 (280)
T ss_dssp TTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGG--CCSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhc--CCceEEEeecCCHHHHHHHHHHHHHH
Confidence 45789988843 3 3333333333345899999987 222222222211 14788999998743211 12223
Q ss_pred CCcccEEEEccchh
Q 018352 103 ANQADLVCCFQHLQ 116 (357)
Q Consensus 103 ~~~FDlV~~~~~lh 116 (357)
.+..|+++.+.++.
T Consensus 101 ~g~id~li~nAg~~ 114 (280)
T 3nrc_A 101 WDGLDAIVHSIAFA 114 (280)
T ss_dssp CSSCCEEEECCCCC
T ss_pred cCCCCEEEECCccC
Confidence 46799998876543
No 497
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=59.18 E-value=61 Score=28.59 Aligned_cols=79 Identities=13% Similarity=-0.060 Sum_probs=50.5
Q ss_pred CCCEEEEECCCCC--h-hHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhh----hhhcC
Q 018352 31 PYVTVCDLYCGAG--V-DVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEKA 103 (357)
Q Consensus 31 ~~~~VLDlGCG~G--~-~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~----l~~~~ 103 (357)
.+.+||=.|++.| . .+..+++.+ .+|+.+|.+++.++.+.+... .++.++.+|+.+..-... .....
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 83 (271)
T 3tzq_B 10 ENKVAIITGACGGIGLETSRVLARAG-ARVVLADLPETDLAGAAASVG-----RGAVHHVVDLTNEVSVRALIDFTIDTF 83 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECTTSCHHHHHHHHC-----TTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHHhC-----CCeEEEECCCCCHHHHHHHHHHHHHHc
Confidence 3568898898765 2 223343444 589999999888777665542 257889999987432111 11123
Q ss_pred CcccEEEEccch
Q 018352 104 NQADLVCCFQHL 115 (357)
Q Consensus 104 ~~FDlV~~~~~l 115 (357)
+..|+++.+.+.
T Consensus 84 g~id~lv~nAg~ 95 (271)
T 3tzq_B 84 GRLDIVDNNAAH 95 (271)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 579999887654
No 498
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=59.10 E-value=79 Score=27.76 Aligned_cols=109 Identities=16% Similarity=0.021 Sum_probs=61.7
Q ss_pred CCEEEEECCCCC--hhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCceeEEEEcCCCCCchhhh----hhhcCCc
Q 018352 32 YVTVCDLYCGAG--VDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIAEFFEADPCAENFETQ----MQEKANQ 105 (357)
Q Consensus 32 ~~~VLDlGCG~G--~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~----l~~~~~~ 105 (357)
+.+||=.|++.| ..+.+.+.....+|+++|.+++.++.+.+... .++.++.+|+.+..-... .....+.
T Consensus 6 ~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 80 (263)
T 2a4k_A 6 GKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE-----AEAIAVVADVSDPKAVEAVFAEALEEFGR 80 (263)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC-----SSEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-----CceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 467888887665 22222223334589999999887766544432 257889999987432111 1112357
Q ss_pred ccEEEEccchhhc--c--CCHHHHH-----------HHHHHHHhcccCCcEEEEE
Q 018352 106 ADLVCCFQHLQMC--F--ETEERAR-----------RLLQNVSSLLKPGGYFLGI 145 (357)
Q Consensus 106 FDlV~~~~~lh~~--f--es~~~~~-----------~~L~~i~~~LkpGG~fi~t 145 (357)
.|+++.+.+.... + .+.++.+ .+++.+...++.+|.++.+
T Consensus 81 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 135 (263)
T 2a4k_A 81 LHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLT 135 (263)
T ss_dssp CCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 8999887654321 1 1222222 2344455555447888766
No 499
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=59.07 E-value=9.9 Score=42.49 Aligned_cols=44 Identities=18% Similarity=0.219 Sum_probs=36.6
Q ss_pred CCCEEEEECCCCChhHHHHHHhcC-CeEEEEeCChHHHHHHHHHh
Q 018352 31 PYVTVCDLYCGAGVDVDKWETALI-ANYIGIDVATSGIGEARDTW 74 (357)
Q Consensus 31 ~~~~VLDlGCG~G~~l~k~~~~~~-~~v~GiDiS~~~l~~A~~r~ 74 (357)
...+++||-||.||...-+..+++ ..+.++|+++.+++.-+.++
T Consensus 850 ~~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~ 894 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNN 894 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHC
T ss_pred CCceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhC
Confidence 356899999999999999988886 56889999999887655554
No 500
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=58.50 E-value=69 Score=27.20 Aligned_cols=72 Identities=13% Similarity=-0.064 Sum_probs=45.2
Q ss_pred CCCEEEEECCCC--ChhHHHHHHhcCCeEEEEeCChHHHHHHHHHhHhcCCCcee-EEEEcCCCCCchhhhhhhcCCccc
Q 018352 31 PYVTVCDLYCGA--GVDVDKWETALIANYIGIDVATSGIGEARDTWENQRKNFIA-EFFEADPCAENFETQMQEKANQAD 107 (357)
Q Consensus 31 ~~~~VLDlGCG~--G~~l~k~~~~~~~~v~GiDiS~~~l~~A~~r~~~~~~~~~v-~f~~~D~~~~~~~~~l~~~~~~FD 107 (357)
.+++||=.|+.. |..+.+.+.....+|++++-++..++.... . .+ .++.+|+. ..+.. .-+..|
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~----~----~~~~~~~~Dl~-~~~~~----~~~~~D 86 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE----R----GASDIVVANLE-EDFSH----AFASID 86 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----T----TCSEEEECCTT-SCCGG----GGTTCS
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh----C----CCceEEEcccH-HHHHH----HHcCCC
Confidence 467999999643 233333333334599999999876654322 2 46 88999997 33322 235799
Q ss_pred EEEEccch
Q 018352 108 LVCCFQHL 115 (357)
Q Consensus 108 lV~~~~~l 115 (357)
+|+...+.
T Consensus 87 ~vi~~ag~ 94 (236)
T 3e8x_A 87 AVVFAAGS 94 (236)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99887654
Done!