Query 018358
Match_columns 357
No_of_seqs 193 out of 446
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 14:00:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018358.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018358hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2l6j_A TPR repeat-containing p 96.1 0.014 4.8E-07 44.0 6.6 50 307-356 16-66 (111)
2 4gcn_A Protein STI-1; structur 96.0 0.011 3.9E-07 47.5 6.2 50 307-356 20-70 (127)
3 3ma5_A Tetratricopeptide repea 95.9 0.017 5.8E-07 44.4 6.5 50 307-356 19-69 (100)
4 3rkv_A Putative peptidylprolyl 95.9 0.023 7.9E-07 46.8 7.5 50 307-356 75-125 (162)
5 4gco_A Protein STI-1; structur 95.8 0.016 5.5E-07 46.7 6.2 50 307-356 59-109 (126)
6 3gyz_A Chaperone protein IPGC; 95.6 0.02 6.7E-07 48.4 6.4 50 307-356 82-132 (151)
7 2xcb_A PCRH, regulatory protei 95.6 0.023 7.8E-07 46.1 6.4 50 307-356 64-114 (142)
8 3upv_A Heat shock protein STI1 95.6 0.025 8.4E-07 44.3 6.4 50 307-356 50-100 (126)
9 3k9i_A BH0479 protein; putativ 95.6 0.024 8.2E-07 44.3 6.3 50 307-356 39-89 (117)
10 2vgx_A Chaperone SYCD; alterna 95.6 0.023 8E-07 47.0 6.5 50 307-356 67-117 (148)
11 2kc7_A BFR218_protein; tetratr 95.6 0.026 8.9E-07 42.2 6.2 50 307-356 12-63 (99)
12 4gco_A Protein STI-1; structur 95.5 0.027 9.2E-07 45.4 6.4 50 307-356 25-75 (126)
13 1hxi_A PEX5, peroxisome target 95.4 0.029 1E-06 44.7 6.2 50 307-356 63-113 (121)
14 3upv_A Heat shock protein STI1 95.4 0.03 1E-06 43.8 6.2 50 307-356 16-66 (126)
15 1na3_A Designed protein CTPR2; 95.3 0.042 1.4E-06 39.8 6.4 50 307-356 21-71 (91)
16 2kck_A TPR repeat; tetratricop 95.3 0.05 1.7E-06 40.3 6.9 49 307-355 52-104 (112)
17 3gyz_A Chaperone protein IPGC; 95.1 0.034 1.1E-06 46.9 6.2 50 306-355 47-97 (151)
18 4ga2_A E3 SUMO-protein ligase 95.1 0.039 1.3E-06 45.5 6.4 49 307-355 43-92 (150)
19 3sz7_A HSC70 cochaperone (SGT) 95.1 0.04 1.4E-06 45.4 6.4 50 307-356 57-107 (164)
20 1hxi_A PEX5, peroxisome target 95.1 0.023 7.7E-07 45.4 4.7 50 307-356 29-79 (121)
21 2xcb_A PCRH, regulatory protei 94.8 0.052 1.8E-06 43.8 6.2 50 306-355 29-79 (142)
22 3vtx_A MAMA; tetratricopeptide 94.8 0.055 1.9E-06 44.9 6.4 50 307-356 119-169 (184)
23 3sz7_A HSC70 cochaperone (SGT) 94.7 0.054 1.8E-06 44.6 6.2 50 307-356 23-73 (164)
24 3q49_B STIP1 homology and U bo 94.7 0.067 2.3E-06 41.9 6.4 50 307-356 55-105 (137)
25 2kat_A Uncharacterized protein 94.6 0.071 2.4E-06 41.1 6.3 50 307-356 31-81 (115)
26 2vgx_A Chaperone SYCD; alterna 94.5 0.062 2.1E-06 44.3 6.2 50 306-355 32-82 (148)
27 2dba_A Smooth muscle cell asso 94.5 0.14 4.9E-06 40.0 8.0 50 307-356 77-127 (148)
28 1elw_A TPR1-domain of HOP; HOP 94.4 0.085 2.9E-06 39.3 6.3 50 307-356 50-100 (118)
29 3q49_B STIP1 homology and U bo 94.4 0.082 2.8E-06 41.3 6.4 50 307-356 21-71 (137)
30 2hr2_A Hypothetical protein; a 94.4 0.054 1.8E-06 47.1 5.7 49 307-355 69-129 (159)
31 2lni_A Stress-induced-phosphop 94.3 0.1 3.6E-06 39.9 6.6 51 306-356 61-112 (133)
32 2fbn_A 70 kDa peptidylprolyl i 94.3 0.15 5.1E-06 43.2 8.2 50 307-356 100-150 (198)
33 1elw_A TPR1-domain of HOP; HOP 94.2 0.11 3.7E-06 38.7 6.4 50 307-356 16-66 (118)
34 3vtx_A MAMA; tetratricopeptide 94.1 0.093 3.2E-06 43.5 6.4 49 307-355 17-66 (184)
35 2xev_A YBGF; tetratricopeptide 94.1 0.11 3.8E-06 40.1 6.4 50 307-356 51-104 (129)
36 3urz_A Uncharacterized protein 94.0 0.17 5.7E-06 43.8 8.0 49 307-355 66-115 (208)
37 1p5q_A FKBP52, FK506-binding p 93.9 0.16 5.5E-06 47.8 8.3 45 310-354 211-256 (336)
38 2xev_A YBGF; tetratricopeptide 93.8 0.13 4.5E-06 39.7 6.4 50 307-356 14-67 (129)
39 2lni_A Stress-induced-phosphop 93.5 0.11 3.9E-06 39.7 5.5 50 307-356 28-78 (133)
40 2vyi_A SGTA protein; chaperone 93.4 0.18 6E-06 38.1 6.4 50 307-356 58-108 (131)
41 3bee_A Putative YFRE protein; 93.4 0.17 5.8E-06 39.2 6.4 48 310-357 24-72 (93)
42 1kt0_A FKBP51, 51 kDa FK506-bi 93.4 0.2 6.7E-06 49.4 8.3 51 306-356 328-379 (457)
43 2pl2_A Hypothetical conserved 93.3 0.16 5.4E-06 44.2 6.7 50 307-356 17-67 (217)
44 1elr_A TPR2A-domain of HOP; HO 93.1 0.2 6.7E-06 38.0 6.3 50 307-356 16-66 (131)
45 1a17_A Serine/threonine protei 93.1 0.19 6.6E-06 40.1 6.4 49 307-355 59-108 (166)
46 1na0_A Designed protein CTPR3; 93.0 0.23 7.9E-06 37.1 6.4 50 307-356 55-105 (125)
47 2vyi_A SGTA protein; chaperone 92.8 0.25 8.4E-06 37.3 6.4 50 307-356 24-74 (131)
48 2if4_A ATFKBP42; FKBP-like, al 92.8 0.18 6.3E-06 47.5 6.8 51 306-356 241-292 (338)
49 2dba_A Smooth muscle cell asso 92.7 0.32 1.1E-05 37.9 7.2 51 306-356 39-93 (148)
50 1hh8_A P67PHOX, NCF-2, neutrop 92.7 0.22 7.4E-06 42.0 6.4 50 307-356 49-99 (213)
51 1ihg_A Cyclophilin 40; ppiase 92.6 0.38 1.3E-05 46.2 8.8 51 306-356 284-335 (370)
52 2pl2_A Hypothetical conserved 92.5 0.14 4.9E-06 44.5 5.3 49 307-355 130-178 (217)
53 1na0_A Designed protein CTPR3; 92.3 0.32 1.1E-05 36.3 6.4 49 307-355 21-70 (125)
54 2fo7_A Synthetic consensus TPR 92.3 0.31 1E-05 36.6 6.3 50 307-356 81-131 (136)
55 2kck_A TPR repeat; tetratricop 92.1 0.25 8.7E-06 36.3 5.6 50 307-356 18-68 (112)
56 1a17_A Serine/threonine protei 92.1 0.31 1E-05 38.9 6.5 50 307-356 25-75 (166)
57 3qky_A Outer membrane assembly 92.1 0.27 9.4E-06 43.3 6.6 51 306-356 26-80 (261)
58 3urz_A Uncharacterized protein 91.7 0.17 5.8E-06 43.7 4.7 51 306-356 15-82 (208)
59 2kat_A Uncharacterized protein 91.7 0.21 7.2E-06 38.3 4.8 45 312-356 2-47 (115)
60 2hr2_A Hypothetical protein; a 91.6 0.25 8.6E-06 42.8 5.6 50 307-356 23-85 (159)
61 3k9i_A BH0479 protein; putativ 91.5 0.084 2.9E-06 41.1 2.2 49 308-356 3-55 (117)
62 1elr_A TPR2A-domain of HOP; HO 91.4 0.27 9.3E-06 37.1 5.1 50 307-356 50-107 (131)
63 4i17_A Hypothetical protein; T 91.2 0.33 1.1E-05 41.6 6.0 50 307-356 54-104 (228)
64 2yhc_A BAMD, UPF0169 lipoprote 91.1 0.38 1.3E-05 41.8 6.4 51 306-356 15-69 (225)
65 2c2l_A CHIP, carboxy terminus 91.1 0.41 1.4E-05 43.6 6.8 50 307-356 50-100 (281)
66 2e2e_A Formate-dependent nitri 90.8 0.41 1.4E-05 39.4 6.0 50 307-356 91-143 (177)
67 4ga2_A E3 SUMO-protein ligase 90.8 0.14 4.8E-06 42.1 3.0 50 307-356 9-59 (150)
68 2fbn_A 70 kDa peptidylprolyl i 90.7 0.47 1.6E-05 40.0 6.5 50 307-356 50-116 (198)
69 2fo7_A Synthetic consensus TPR 90.6 0.54 1.8E-05 35.2 6.1 50 307-356 47-97 (136)
70 2r5s_A Uncharacterized protein 90.5 0.092 3.1E-06 43.9 1.7 49 306-354 17-66 (176)
71 3ieg_A DNAJ homolog subfamily 90.4 0.84 2.9E-05 40.8 8.2 50 307-356 284-334 (359)
72 3u4t_A TPR repeat-containing p 90.3 0.48 1.6E-05 41.2 6.4 48 307-354 49-100 (272)
73 2h6f_A Protein farnesyltransfe 90.3 0.17 5.7E-06 49.2 3.6 47 309-355 180-227 (382)
74 3as5_A MAMA; tetratricopeptide 90.3 0.59 2E-05 37.3 6.4 50 307-356 122-172 (186)
75 2c2l_A CHIP, carboxy terminus 90.1 0.42 1.5E-05 43.5 6.0 50 307-356 16-66 (281)
76 3uq3_A Heat shock protein STI1 90.0 0.57 1.9E-05 39.9 6.4 50 307-356 185-235 (258)
77 1xnf_A Lipoprotein NLPI; TPR, 89.9 0.57 2E-05 40.5 6.4 49 307-355 89-138 (275)
78 2h6f_A Protein farnesyltransfe 89.5 0.46 1.6E-05 46.0 6.1 50 307-356 143-194 (382)
79 3qou_A Protein YBBN; thioredox 89.4 0.29 1E-05 44.6 4.3 48 307-354 129-177 (287)
80 3uq3_A Heat shock protein STI1 89.3 0.7 2.4E-05 39.3 6.4 50 307-356 151-201 (258)
81 1xnf_A Lipoprotein NLPI; TPR, 89.3 0.69 2.4E-05 40.0 6.5 50 307-356 55-105 (275)
82 3as5_A MAMA; tetratricopeptide 89.2 0.8 2.7E-05 36.5 6.4 50 307-356 88-138 (186)
83 3isr_A Transglutaminase-like e 89.0 0.58 2E-05 44.3 6.2 72 119-201 127-198 (293)
84 2vq2_A PILW, putative fimbrial 88.9 0.77 2.6E-05 38.1 6.3 48 308-355 126-174 (225)
85 3rkv_A Putative peptidylprolyl 88.7 0.36 1.2E-05 39.4 4.0 50 307-356 23-91 (162)
86 1hh8_A P67PHOX, NCF-2, neutrop 88.7 0.9 3.1E-05 38.1 6.6 50 307-356 83-149 (213)
87 3u4t_A TPR repeat-containing p 88.5 0.51 1.7E-05 41.0 5.1 47 308-354 87-134 (272)
88 4gyw_A UDP-N-acetylglucosamine 88.5 0.84 2.9E-05 48.3 7.6 50 307-356 55-105 (723)
89 3mkr_A Coatomer subunit epsilo 88.4 0.71 2.4E-05 42.3 6.2 49 307-355 212-262 (291)
90 1wao_1 Serine/threonine protei 88.2 1.1 3.6E-05 44.5 7.8 50 307-356 52-102 (477)
91 2vq2_A PILW, putative fimbrial 88.1 0.99 3.4E-05 37.4 6.4 50 307-356 54-105 (225)
92 4i17_A Hypothetical protein; T 88.0 0.91 3.1E-05 38.8 6.3 50 307-356 88-145 (228)
93 4eqf_A PEX5-related protein; a 87.9 0.85 2.9E-05 41.8 6.4 50 307-356 111-161 (365)
94 3ieg_A DNAJ homolog subfamily 87.9 0.85 2.9E-05 40.7 6.3 50 307-356 49-99 (359)
95 4eqf_A PEX5-related protein; a 87.8 0.77 2.6E-05 42.0 6.1 50 307-356 259-309 (365)
96 2e2e_A Formate-dependent nitri 87.7 0.83 2.8E-05 37.5 5.6 50 307-356 56-109 (177)
97 3kd4_A Putative protease; stru 87.6 1.1 3.8E-05 45.4 7.6 76 119-201 229-304 (506)
98 2q7f_A YRRB protein; TPR, prot 87.3 1.1 3.8E-05 37.8 6.4 49 307-355 137-186 (243)
99 1fch_A Peroxisomal targeting s 87.1 0.98 3.4E-05 41.0 6.3 50 307-356 263-313 (368)
100 2q7f_A YRRB protein; TPR, prot 87.0 1.2 4.1E-05 37.6 6.4 50 307-356 103-153 (243)
101 2pzi_A Probable serine/threoni 87.0 0.68 2.3E-05 48.0 5.7 50 307-356 445-495 (681)
102 3qky_A Outer membrane assembly 87.0 0.72 2.4E-05 40.5 5.1 50 307-356 109-176 (261)
103 3cv0_A Peroxisome targeting si 86.9 1.1 3.8E-05 39.5 6.4 50 307-356 218-268 (327)
104 2r5s_A Uncharacterized protein 86.9 1.1 3.8E-05 37.1 6.0 49 307-355 120-171 (176)
105 2ho1_A Type 4 fimbrial biogene 86.9 1.2 4.2E-05 38.1 6.5 50 307-356 187-237 (252)
106 2y4t_A DNAJ homolog subfamily 86.7 1.1 3.8E-05 42.0 6.6 51 306-356 306-357 (450)
107 2gw1_A Mitochondrial precursor 86.4 1 3.5E-05 42.7 6.3 50 307-356 51-101 (514)
108 2ho1_A Type 4 fimbrial biogene 86.4 1.2 4.2E-05 38.1 6.2 49 307-355 117-168 (252)
109 1wao_1 Serine/threonine protei 86.4 1.1 3.7E-05 44.5 6.6 51 306-356 17-68 (477)
110 3hym_B Cell division cycle pro 86.1 1.6 5.4E-05 38.6 6.9 50 307-356 171-221 (330)
111 1fch_A Peroxisomal targeting s 86.0 1.4 4.8E-05 39.9 6.7 50 307-356 110-160 (368)
112 2gw1_A Mitochondrial precursor 86.0 1.2 4E-05 42.3 6.4 50 307-356 18-67 (514)
113 3hym_B Cell division cycle pro 85.6 0.98 3.4E-05 40.0 5.3 49 307-355 248-297 (330)
114 4gyw_A UDP-N-acetylglucosamine 85.4 1 3.5E-05 47.6 6.2 50 307-356 89-139 (723)
115 3cv0_A Peroxisome targeting si 85.0 1.5 5E-05 38.8 6.2 50 307-356 67-117 (327)
116 4abn_A Tetratricopeptide repea 84.7 1.2 4.3E-05 43.7 6.1 51 306-356 113-165 (474)
117 2vsy_A XCC0866; transferase, g 84.6 1.6 5.6E-05 43.3 7.0 50 307-356 69-119 (568)
118 2y4t_A DNAJ homolog subfamily 84.2 1.5 5.2E-05 41.1 6.2 50 307-356 72-122 (450)
119 4gcn_A Protein STI-1; structur 84.2 1.9 6.6E-05 34.0 6.0 49 307-355 54-110 (127)
120 3fp2_A TPR repeat-containing p 84.0 0.72 2.5E-05 44.3 3.9 46 307-352 71-117 (537)
121 1zu2_A Mitochondrial import re 83.9 1.1 3.7E-05 38.7 4.6 46 310-355 61-118 (158)
122 2vsy_A XCC0866; transferase, g 83.9 1.5 5.3E-05 43.5 6.4 50 307-356 103-156 (568)
123 1w3b_A UDP-N-acetylglucosamine 83.7 1.8 6.2E-05 39.9 6.5 50 307-356 317-367 (388)
124 1p5q_A FKBP52, FK506-binding p 83.5 1.9 6.3E-05 40.4 6.4 50 307-356 159-224 (336)
125 1w3b_A UDP-N-acetylglucosamine 82.3 2.3 7.8E-05 39.3 6.5 49 307-355 283-332 (388)
126 2yhc_A BAMD, UPF0169 lipoprote 82.3 1.9 6.6E-05 37.1 5.7 50 307-356 108-175 (225)
127 3mkr_A Coatomer subunit epsilo 82.2 2.1 7.3E-05 39.0 6.2 50 307-356 178-228 (291)
128 1zu2_A Mitochondrial import re 81.3 0.7 2.4E-05 39.9 2.4 49 307-355 14-73 (158)
129 3qou_A Protein YBBN; thioredox 80.6 1.5 5.2E-05 39.7 4.6 46 310-355 200-246 (287)
130 2ond_A Cleavage stimulation fa 80.5 2.2 7.6E-05 38.7 5.7 49 307-355 215-268 (308)
131 4abn_A Tetratricopeptide repea 80.3 1.5 5.3E-05 43.0 4.8 47 309-355 235-285 (474)
132 2xpi_A Anaphase-promoting comp 80.2 2.6 9E-05 41.1 6.4 50 307-356 528-578 (597)
133 3fp2_A TPR repeat-containing p 79.6 2.9 9.9E-05 40.0 6.4 47 307-353 356-403 (537)
134 1kt0_A FKBP51, 51 kDa FK506-bi 79.4 2.2 7.6E-05 41.8 5.6 51 306-356 279-345 (457)
135 2pzi_A Probable serine/threoni 79.0 3.3 0.00011 42.8 7.0 51 306-356 402-461 (681)
136 4a1s_A PINS, partner of inscut 78.2 3.5 0.00012 38.1 6.3 49 307-355 60-113 (411)
137 2l6j_A TPR repeat-containing p 78.0 0.36 1.2E-05 35.9 -0.5 45 307-351 50-101 (111)
138 1ihg_A Cyclophilin 40; ppiase 77.7 1.9 6.5E-05 41.2 4.4 50 307-356 235-301 (370)
139 3edt_B KLC 2, kinesin light ch 77.0 4.8 0.00016 34.3 6.4 50 307-356 139-197 (283)
140 2xpi_A Anaphase-promoting comp 76.5 4 0.00014 39.8 6.5 48 307-354 453-501 (597)
141 1qqe_A Vesicular transport pro 76.5 3.8 0.00013 37.0 5.9 50 307-356 170-227 (292)
142 3ro2_A PINS homolog, G-protein 76.1 5.1 0.00017 34.9 6.5 48 307-354 17-69 (338)
143 3edt_B KLC 2, kinesin light ch 76.1 4.9 0.00017 34.2 6.3 50 307-356 97-155 (283)
144 3qwp_A SET and MYND domain-con 76.1 6.3 0.00022 38.7 7.8 48 307-354 341-397 (429)
145 3ro3_A PINS homolog, G-protein 75.9 5.7 0.00019 30.4 6.1 50 307-356 61-117 (164)
146 3ro3_A PINS homolog, G-protein 73.9 7.2 0.00025 29.8 6.2 50 307-356 101-157 (164)
147 3qww_A SET and MYND domain-con 73.6 8.6 0.00029 37.9 8.0 48 307-354 352-408 (433)
148 2if4_A ATFKBP42; FKBP-like, al 73.2 3.7 0.00013 38.4 5.0 51 306-356 190-258 (338)
149 1qqe_A Vesicular transport pro 73.1 7.3 0.00025 35.0 6.9 48 309-356 132-186 (292)
150 1pc2_A Mitochondria fission pr 73.1 3 0.0001 35.7 4.0 49 308-356 48-99 (152)
151 1dce_A Protein (RAB geranylger 71.9 3.7 0.00013 41.8 5.1 47 310-356 124-172 (567)
152 3nf1_A KLC 1, kinesin light ch 71.4 4.7 0.00016 35.0 5.0 50 307-356 165-223 (311)
153 3dra_A Protein farnesyltransfe 71.1 6 0.0002 37.2 6.0 48 309-356 124-174 (306)
154 1na3_A Designed protein CTPR2; 70.6 4.9 0.00017 28.2 4.2 36 307-342 55-91 (91)
155 3ma5_A Tetratricopeptide repea 69.7 5.3 0.00018 29.8 4.4 32 325-356 3-35 (100)
156 3sf4_A G-protein-signaling mod 69.7 8.2 0.00028 35.0 6.5 47 307-353 21-72 (406)
157 2ifu_A Gamma-SNAP; membrane fu 69.7 12 0.0004 33.9 7.5 49 307-355 167-222 (307)
158 2ond_A Cleavage stimulation fa 68.3 9.3 0.00032 34.4 6.5 50 307-356 111-162 (308)
159 3dra_A Protein farnesyltransfe 67.0 8.2 0.00028 36.2 6.0 46 310-355 48-96 (306)
160 2ooe_A Cleavage stimulation fa 66.6 10 0.00035 37.0 6.8 49 308-356 25-74 (530)
161 3n71_A Histone lysine methyltr 66.0 15 0.00052 36.7 8.1 48 307-354 363-419 (490)
162 3nf1_A KLC 1, kinesin light ch 66.0 11 0.00037 32.7 6.2 48 308-355 40-96 (311)
163 3gw4_A Uncharacterized protein 65.9 6.9 0.00024 31.9 4.7 49 307-355 38-93 (203)
164 4f3v_A ESX-1 secretion system 65.9 3.6 0.00012 38.6 3.1 46 307-353 147-196 (282)
165 3ro2_A PINS homolog, G-protein 65.1 11 0.00039 32.5 6.2 49 307-355 55-110 (338)
166 4a1s_A PINS, partner of inscut 64.8 9.6 0.00033 35.0 5.9 49 307-355 98-153 (411)
167 3ly7_A Transcriptional activat 64.6 9.9 0.00034 37.1 6.1 47 307-353 289-335 (372)
168 3q15_A PSP28, response regulat 59.7 19 0.00065 33.2 7.0 49 307-355 234-288 (378)
169 4g1t_A Interferon-induced prot 59.2 11 0.00037 35.5 5.3 49 307-355 225-274 (472)
170 2ifu_A Gamma-SNAP; membrane fu 59.1 17 0.00057 32.8 6.4 22 306-328 206-227 (307)
171 3ulq_A Response regulator aspa 58.9 23 0.0008 32.5 7.5 49 307-355 236-291 (383)
172 3dss_A Geranylgeranyl transfer 58.2 16 0.00055 34.8 6.3 48 309-356 124-173 (331)
173 3gw4_A Uncharacterized protein 58.1 24 0.00082 28.5 6.7 49 307-355 119-174 (203)
174 2ooe_A Cleavage stimulation fa 58.0 11 0.00036 36.9 5.1 50 307-356 403-453 (530)
175 3sf4_A G-protein-signaling mod 58.0 17 0.00058 32.8 6.2 49 307-355 59-114 (406)
176 3u3w_A Transcriptional activat 57.6 23 0.00078 31.4 6.9 48 308-355 209-264 (293)
177 2qfc_A PLCR protein; TPR, HTH, 57.3 32 0.0011 30.5 7.8 43 307-349 208-257 (293)
178 3ulq_A Response regulator aspa 57.1 19 0.00065 33.1 6.5 49 308-356 197-252 (383)
179 3q7a_A Farnesyltransferase alp 56.6 18 0.00062 34.8 6.4 47 310-356 104-153 (349)
180 4g1t_A Interferon-induced prot 54.0 22 0.00074 33.3 6.4 49 307-355 63-121 (472)
181 2qfc_A PLCR protein; TPR, HTH, 52.2 23 0.00079 31.4 6.0 14 244-257 196-209 (293)
182 1nzn_A CGI-135 protein, fissio 51.8 31 0.0011 28.4 6.2 48 308-356 51-102 (126)
183 1ouv_A Conserved hypothetical 51.7 31 0.0011 29.8 6.7 48 308-356 55-106 (273)
184 1ouv_A Conserved hypothetical 51.7 33 0.0011 29.5 6.9 48 308-356 91-142 (273)
185 3u3w_A Transcriptional activat 51.1 27 0.00092 31.0 6.3 47 309-355 169-223 (293)
186 2ff4_A Probable regulatory pro 50.7 20 0.00068 34.5 5.6 50 306-355 182-232 (388)
187 1dce_A Protein (RAB geranylger 47.5 24 0.00081 35.8 5.9 46 311-356 89-137 (567)
188 1hz4_A MALT regulatory protein 47.1 22 0.00076 32.3 5.1 48 307-354 105-161 (373)
189 4gns_B Protein CSD3, chitin bi 45.4 26 0.00089 37.3 5.9 48 307-354 349-397 (754)
190 4f3v_A ESX-1 secretion system 43.8 36 0.0012 31.6 6.1 49 307-355 183-235 (282)
191 3q7a_A Farnesyltransferase alp 41.8 39 0.0013 32.4 6.1 36 310-345 140-176 (349)
192 1hz4_A MALT regulatory protein 40.1 52 0.0018 29.7 6.5 49 307-355 65-120 (373)
193 3dss_A Geranylgeranyl transfer 39.5 46 0.0016 31.5 6.2 46 311-356 90-138 (331)
194 3rjv_A Putative SEL1 repeat pr 38.3 80 0.0027 26.5 7.1 47 308-354 142-194 (212)
195 1y8m_A FIS1; mitochondria, unk 33.7 67 0.0023 27.1 5.5 47 310-356 57-105 (144)
196 2f4m_A Peptide N-glycanase; gl 33.4 2.2E+02 0.0076 26.7 9.7 30 172-201 131-160 (295)
197 3o48_A Mitochondria fission 1 33.0 59 0.002 27.1 5.0 47 310-356 58-106 (134)
198 3q15_A PSP28, response regulat 31.5 50 0.0017 30.2 4.9 49 307-355 113-168 (378)
199 3qww_A SET and MYND domain-con 31.4 82 0.0028 30.8 6.7 48 307-354 310-366 (433)
200 2v5f_A Prolyl 4-hydroxylase su 30.8 77 0.0027 23.7 5.1 49 307-355 17-73 (104)
201 4b4t_Q 26S proteasome regulato 29.1 72 0.0025 29.3 5.5 48 307-354 16-81 (434)
202 3qwp_A SET and MYND domain-con 27.8 98 0.0033 30.0 6.5 48 307-354 299-355 (429)
203 3u64_A Protein TP_0956; tetrat 27.1 65 0.0022 30.5 4.8 49 306-354 215-266 (301)
204 1klx_A Cysteine rich protein B 26.8 1.8E+02 0.006 22.7 6.9 48 308-356 74-125 (138)
205 3n71_A Histone lysine methyltr 25.5 1.3E+02 0.0043 30.0 6.9 49 307-355 321-378 (490)
206 2v5f_A Prolyl 4-hydroxylase su 24.3 1.1E+02 0.0036 22.9 4.8 29 307-335 58-87 (104)
207 3mv2_B Coatomer subunit epsilo 23.6 1.7E+02 0.0057 27.5 7.0 49 308-356 113-164 (310)
208 1y8m_A FIS1; mitochondria, unk 23.4 79 0.0027 26.7 4.1 24 305-328 87-110 (144)
209 3rjv_A Putative SEL1 repeat pr 22.0 1.7E+02 0.006 24.3 6.3 47 308-354 102-155 (212)
210 3o48_A Mitochondria fission 1 21.5 93 0.0032 25.9 4.2 23 305-327 88-110 (134)
211 1x3z_A Peptide: N-glycanase; h 21.2 51 0.0017 31.7 2.8 34 168-201 168-201 (335)
212 1nzn_A CGI-135 protein, fissio 20.7 75 0.0026 26.1 3.4 23 305-327 84-106 (126)
No 1
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=96.06 E-value=0.014 Score=43.99 Aligned_cols=50 Identities=20% Similarity=0.241 Sum_probs=45.6
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+...++.+.+.| ++.-+..+|.++.++|+|.+|+..++..++
T Consensus 16 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 66 (111)
T 2l6j_A 16 KQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLR 66 (111)
T ss_dssp TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 67899999999999999999 688889999999999999999999987664
No 2
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=96.01 E-value=0.011 Score=47.50 Aligned_cols=50 Identities=10% Similarity=0.157 Sum_probs=45.6
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
+.|+++.|+.+.++.+.++| ++.-+..+|.+|+++|+|++|+.+++.-++
T Consensus 20 ~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~ 70 (127)
T 4gcn_A 20 KQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVE 70 (127)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHH
Confidence 57899999999999999999 678889999999999999999999887653
No 3
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=95.91 E-value=0.017 Score=44.37 Aligned_cols=50 Identities=12% Similarity=0.040 Sum_probs=45.6
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+...++.+.++| ++.-+.-+|.+|.++|++.+|+..++..++
T Consensus 19 ~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~ 69 (100)
T 3ma5_A 19 KHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIE 69 (100)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 56799999999999999999 688889999999999999999999987653
No 4
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=95.85 E-value=0.023 Score=46.77 Aligned_cols=50 Identities=16% Similarity=0.130 Sum_probs=45.5
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+..+++.+.++| ++.-+.-+|.+|+++|+|.+|+.+++..++
T Consensus 75 ~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~ 125 (162)
T 3rkv_A 75 NIGDLHEAEETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLR 125 (162)
T ss_dssp HHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hcCcHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHh
Confidence 45699999999999999999 688889999999999999999999987664
No 5
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=95.79 E-value=0.016 Score=46.72 Aligned_cols=50 Identities=16% Similarity=0.133 Sum_probs=39.8
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+...++.+.++| ++.-+.-+|.++.++|.+++|+.+++..++
T Consensus 59 ~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~ 109 (126)
T 4gco_A 59 KLMEFQRALDDCDTCIRLDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQ 109 (126)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhccHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 67788888888888888888 567778888888888888888888776553
No 6
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=95.64 E-value=0.02 Score=48.42 Aligned_cols=50 Identities=6% Similarity=-0.108 Sum_probs=45.8
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+.+.++.+.++| +|.-+..+|.+|.++|++++|+..++.-++
T Consensus 82 ~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~ 132 (151)
T 3gyz_A 82 IKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQ 132 (151)
T ss_dssp HTTCHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 67899999999999999999 688899999999999999999999987653
No 7
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=95.61 E-value=0.023 Score=46.05 Aligned_cols=50 Identities=12% Similarity=-0.019 Sum_probs=45.9
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+.+.++.+.++| +|.-+..+|.+|.++|++.+|+..++..++
T Consensus 64 ~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 114 (142)
T 2xcb_A 64 SLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQLGDLDGAESGFYSARA 114 (142)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 67899999999999999999 688889999999999999999999987653
No 8
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=95.60 E-value=0.025 Score=44.33 Aligned_cols=50 Identities=14% Similarity=0.159 Sum_probs=45.7
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+.+.++.+.++| ++.-+.-+|.++.++|++.+|+..++..++
T Consensus 50 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~ 100 (126)
T 3upv_A 50 KLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASALETLDAART 100 (126)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 67899999999999999999 688889999999999999999999987654
No 9
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=95.58 E-value=0.024 Score=44.30 Aligned_cols=50 Identities=26% Similarity=0.262 Sum_probs=45.7
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+.+.++.+.+.| ++.-+.-+|.+++++|++.+|+..++..++
T Consensus 39 ~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 89 (117)
T 3k9i_A 39 TLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGVELLLKIIA 89 (117)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 57899999999999999999 678889999999999999999999887654
No 10
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=95.57 E-value=0.023 Score=46.99 Aligned_cols=50 Identities=12% Similarity=0.068 Sum_probs=46.2
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+.+.++.+.++| ++.-+..+|.+|.++|++.+|+..++..++
T Consensus 67 ~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 117 (148)
T 2vgx_A 67 AMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQXGELAEAESGLFLAQE 117 (148)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 67899999999999999999 688899999999999999999999987764
No 11
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=95.57 E-value=0.026 Score=42.19 Aligned_cols=50 Identities=18% Similarity=0.161 Sum_probs=45.2
Q ss_pred CcCCHHHHHHHHHHHhccCC-Chh-HHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAK-ELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~-e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+...+..+.+.| ++. -+..+|.++++.|++.+|+..++..++
T Consensus 12 ~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~ 63 (99)
T 2kc7_A 12 NQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIE 63 (99)
T ss_dssp HHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 45799999999999999999 677 889999999999999999999987654
No 12
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=95.49 E-value=0.027 Score=45.36 Aligned_cols=50 Identities=12% Similarity=0.091 Sum_probs=45.9
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
+.|+++.|+.+.++.+.++| ++.-+..+|.+|.++|.+.+|+.+++.-++
T Consensus 25 ~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 75 (126)
T 4gco_A 25 KKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIR 75 (126)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHH
Confidence 56799999999999999999 788899999999999999999999987653
No 13
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=95.36 E-value=0.029 Score=44.71 Aligned_cols=50 Identities=12% Similarity=0.020 Sum_probs=42.2
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+.+.++.+.++| ++.-+..+|.+|.+.|++++|+..++..++
T Consensus 63 ~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 113 (121)
T 1hxi_A 63 ENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEHNANAALASLRAWLL 113 (121)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 67888889999999888888 577778888889899999988888887664
No 14
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=95.35 E-value=0.03 Score=43.79 Aligned_cols=50 Identities=14% Similarity=0.066 Sum_probs=45.8
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+...++.+.++| ++.-+..+|.+++++|.|.+|+.+++..++
T Consensus 16 ~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~ 66 (126)
T 3upv_A 16 TKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIE 66 (126)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 57799999999999999999 688899999999999999999999987653
No 15
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=95.30 E-value=0.042 Score=39.78 Aligned_cols=50 Identities=18% Similarity=0.343 Sum_probs=45.0
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+...++.+.+.| ++.-+..+|.++.+.|++++|+..++..++
T Consensus 21 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 71 (91)
T 1na3_A 21 KQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALE 71 (91)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 46799999999999999999 678889999999999999999999887653
No 16
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=95.25 E-value=0.05 Score=40.32 Aligned_cols=49 Identities=10% Similarity=-0.090 Sum_probs=29.5
Q ss_pred CcCCHHHHHHHHHHHhccCCC---hhHHHHHhHHHHHc-CChHHHHHHHHHHh
Q 018358 307 RFGDMRCALAACERLILLESD---AKELRDYSILLYHC-GLYEQSLQYLKFYQ 355 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~Pd---p~e~RDrGlLl~~l-g~~~~A~~dL~~yl 355 (357)
..|+++.|+.+.++.+.+.|+ +.-+..+|.++.++ |++++|.+.++..+
T Consensus 52 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~ 104 (112)
T 2kck_A 52 NLERYEEAVDCYNYVINVIEDEYNKDVWAAKADALRYIEGKEVEAEIAEARAK 104 (112)
T ss_dssp HTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHHTTCSSCSHHHHHHHHHHG
T ss_pred HccCHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 455666666666666666654 34456666666666 66666666665544
No 17
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=95.14 E-value=0.034 Score=46.93 Aligned_cols=50 Identities=8% Similarity=0.016 Sum_probs=46.0
Q ss_pred cCcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHh
Q 018358 306 VRFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQ 355 (357)
Q Consensus 306 lr~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yl 355 (357)
.+.|+++.|+.+.++++.++| ++.-+.-+|.+|+++|+|++|+..++.-+
T Consensus 47 ~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al 97 (151)
T 3gyz_A 47 YNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAF 97 (151)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 367899999999999999999 78889999999999999999999987654
No 18
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=95.12 E-value=0.039 Score=45.50 Aligned_cols=49 Identities=12% Similarity=0.007 Sum_probs=34.0
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQ 355 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yl 355 (357)
..|+++.|+.+.++.+.++| ++.-+.-+|.+|.+.|.+++|+..++..+
T Consensus 43 ~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al 92 (150)
T 4ga2_A 43 EAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENTDKAVECYRRSV 92 (150)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCchHHHHHHHHHHH
Confidence 44577777777777777777 56666777777777777777777666544
No 19
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=95.09 E-value=0.04 Score=45.38 Aligned_cols=50 Identities=10% Similarity=0.054 Sum_probs=46.0
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+.+.++.+.++| ++.-+.-+|.+|+++|++.+|+..++..++
T Consensus 57 ~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 107 (164)
T 3sz7_A 57 ASGQHEKAAEDAELATVVDPKYSKAWSRLGLARFDMADYKGAKEAYEKGIE 107 (164)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 67899999999999999999 688889999999999999999999987764
No 20
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=95.09 E-value=0.023 Score=45.41 Aligned_cols=50 Identities=12% Similarity=0.064 Sum_probs=45.6
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
+.|+++.|+.+.++.+.++| ++.-+..+|.++.+.|.+.+|+..++.-++
T Consensus 29 ~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~ 79 (121)
T 1hxi_A 29 KLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARM 79 (121)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 56799999999999999999 688899999999999999999999887653
No 21
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=94.77 E-value=0.052 Score=43.83 Aligned_cols=50 Identities=26% Similarity=0.294 Sum_probs=45.6
Q ss_pred cCcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHh
Q 018358 306 VRFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQ 355 (357)
Q Consensus 306 lr~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yl 355 (357)
.+.|+++.|+...++++.++| ++.-+..+|.++.+.|+|++|+..++.-+
T Consensus 29 ~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 79 (142)
T 2xcb_A 29 YQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGA 79 (142)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 367899999999999999999 78889999999999999999999987654
No 22
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=94.77 E-value=0.055 Score=44.93 Aligned_cols=50 Identities=18% Similarity=0.282 Sum_probs=45.7
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+.+.++.+.++| ++.-+.-+|.+|.++|.+++|+..++.-++
T Consensus 119 ~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 169 (184)
T 3vtx_A 119 SMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAVKYFKKALE 169 (184)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 46799999999999999999 688889999999999999999999987664
No 23
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=94.71 E-value=0.054 Score=44.60 Aligned_cols=50 Identities=8% Similarity=0.048 Sum_probs=45.9
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+.+.++.+.++| ++.-+..+|.+|+++|+|.+|+.+++..++
T Consensus 23 ~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 73 (164)
T 3sz7_A 23 ARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATV 73 (164)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 57799999999999999999 688899999999999999999999987653
No 24
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=94.68 E-value=0.067 Score=41.86 Aligned_cols=50 Identities=18% Similarity=0.208 Sum_probs=45.5
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+.+.++.+.++| ++.-+.-+|.+++++|++..|+..++..++
T Consensus 55 ~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 105 (137)
T 3q49_B 55 KMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYS 105 (137)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 67899999999999999999 688889999999999999999999887653
No 25
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=94.59 E-value=0.071 Score=41.10 Aligned_cols=50 Identities=12% Similarity=-0.053 Sum_probs=45.2
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+.+.++.+.++| ++.-+..+|.++.+.|++.+|...++..++
T Consensus 31 ~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 81 (115)
T 2kat_A 31 EHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLA 81 (115)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 56799999999999999999 577889999999999999999999887653
No 26
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=94.53 E-value=0.062 Score=44.32 Aligned_cols=50 Identities=14% Similarity=0.190 Sum_probs=45.7
Q ss_pred cCcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHh
Q 018358 306 VRFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQ 355 (357)
Q Consensus 306 lr~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yl 355 (357)
...|+++.|+...++++.++| ++.-+.-+|.++.+.|+|++|+..++.-+
T Consensus 32 ~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 82 (148)
T 2vgx_A 32 YQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGA 82 (148)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 367899999999999999999 78888999999999999999999988654
No 27
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.46 E-value=0.14 Score=40.01 Aligned_cols=50 Identities=22% Similarity=0.183 Sum_probs=45.7
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+.+.++.+.+.| ++.-+..+|.+++++|++++|...++..++
T Consensus 77 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~ 127 (148)
T 2dba_A 77 KLEDYDKAETEASKAIEKDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVS 127 (148)
T ss_dssp HTTCHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHccHHHHHHHHHHHHhhCccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 57899999999999999999 678889999999999999999999987654
No 28
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=94.45 E-value=0.085 Score=39.28 Aligned_cols=50 Identities=14% Similarity=0.034 Sum_probs=43.4
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+.+.++.+.+.| ++.-+..+|.++.+.|++.+|...++..++
T Consensus 50 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~ 100 (118)
T 1elw_A 50 KKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLK 100 (118)
T ss_dssp HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred hhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 67899999999999999999 577788999999999999999988887654
No 29
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=94.44 E-value=0.082 Score=41.34 Aligned_cols=50 Identities=16% Similarity=-0.060 Sum_probs=45.5
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+.+.++.+.++| ++.-+..+|.+++++|++..|+..++..++
T Consensus 21 ~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~ 71 (137)
T 3q49_B 21 VGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALE 71 (137)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 56799999999999999999 688889999999999999999999887653
No 30
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=94.42 E-value=0.054 Score=47.06 Aligned_cols=49 Identities=14% Similarity=0.120 Sum_probs=44.3
Q ss_pred CcCCHHHHHHHHHHHhcc-------CCC-hhHH----HHHhHHHHHcCChHHHHHHHHHHh
Q 018358 307 RFGDMRCALAACERLILL-------ESD-AKEL----RDYSILLYHCGLYEQSLQYLKFYQ 355 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL-------~Pd-p~e~----RDrGlLl~~lg~~~~A~~dL~~yl 355 (357)
.-|+++.|+.++++.|.+ +|+ +..| .-+|..|..+|++++|+.+++.=+
T Consensus 69 ~Lgr~~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAl 129 (159)
T 2hr2_A 69 GLRSFDEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVV 129 (159)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHH
Confidence 568999999999999999 995 6778 899999999999999999988654
No 31
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=94.28 E-value=0.1 Score=39.92 Aligned_cols=51 Identities=20% Similarity=0.197 Sum_probs=46.1
Q ss_pred cCcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 306 VRFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 306 lr~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
...|+++.|+.+.++.+.+.| ++.-+..+|.++++.|++++|...++..++
T Consensus 61 ~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~ 112 (133)
T 2lni_A 61 TKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALD 112 (133)
T ss_dssp TTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 467899999999999999999 688889999999999999999999887653
No 32
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=94.27 E-value=0.15 Score=43.22 Aligned_cols=50 Identities=14% Similarity=0.200 Sum_probs=43.3
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+.++++.+.++| ++.-+.-+|.+|+++|++.+|+..++..++
T Consensus 100 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~ 150 (198)
T 2fbn_A 100 KNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAAS 150 (198)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 34699999999999999999 677888999999999999999998887653
No 33
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=94.21 E-value=0.11 Score=38.69 Aligned_cols=50 Identities=16% Similarity=0.100 Sum_probs=44.4
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+...+..+.+.| ++.-+..+|.++.+.|.+.+|+..++..++
T Consensus 16 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~ 66 (118)
T 1elw_A 16 SVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVD 66 (118)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Confidence 46799999999999999999 688889999999999999999998876653
No 34
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=94.13 E-value=0.093 Score=43.48 Aligned_cols=49 Identities=18% Similarity=0.302 Sum_probs=42.6
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQ 355 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yl 355 (357)
..|+++.|+.+.++.+.++| ++.-+..+|.+|.+.|.+..|+..++..+
T Consensus 17 ~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~ 66 (184)
T 3vtx_A 17 TKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFV 66 (184)
T ss_dssp HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 45799999999999999999 67888999999999999999988887654
No 35
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=94.05 E-value=0.11 Score=40.10 Aligned_cols=50 Identities=18% Similarity=0.102 Sum_probs=44.8
Q ss_pred CcCCHHHHHHHHHHHhccCC-C---hhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-D---AKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-d---p~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+...++++.+.| + +.-+..+|.++++.|++++|...++..++
T Consensus 51 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~ 104 (129)
T 2xev_A 51 ATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVAT 104 (129)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 57899999999999999999 5 56679999999999999999999987764
No 36
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=93.97 E-value=0.17 Score=43.76 Aligned_cols=49 Identities=10% Similarity=0.042 Sum_probs=36.7
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQ 355 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yl 355 (357)
..|+++.|+.+.++.+.++| ++.-+..+|.++...|++.+|+..++..+
T Consensus 66 ~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 115 (208)
T 3urz_A 66 KNRNYDKAYLFYKELLQKAPNNVDCLEACAEMQVCRGQEKDALRMYEKIL 115 (208)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 45577778888888888887 56777777888888888888877776654
No 37
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=93.89 E-value=0.16 Score=47.79 Aligned_cols=45 Identities=16% Similarity=0.219 Sum_probs=23.5
Q ss_pred CHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHH
Q 018358 310 DMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFY 354 (357)
Q Consensus 310 d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~y 354 (357)
+++.|+.++++.+.++| ++.-+.-+|.+|+++|++.+|+.+++..
T Consensus 211 ~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~a 256 (336)
T 1p5q_A 211 AFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKV 256 (336)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 55555555555555555 3444455555555555555555555443
No 38
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=93.81 E-value=0.13 Score=39.67 Aligned_cols=50 Identities=10% Similarity=-0.002 Sum_probs=44.8
Q ss_pred CcCCHHHHHHHHHHHhccCC-Ch---hHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DA---KELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp---~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+...+.++...| ++ .-+..+|.++++.|+|.+|+..++..++
T Consensus 14 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~ 67 (129)
T 2xev_A 14 KNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVS 67 (129)
T ss_dssp HTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 56799999999999999999 56 5678999999999999999999988764
No 39
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=93.48 E-value=0.11 Score=39.68 Aligned_cols=50 Identities=16% Similarity=0.058 Sum_probs=45.3
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+.+.++.+.+.| ++.-+..+|.++.+.|++++|+..++..++
T Consensus 28 ~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~ 78 (133)
T 2lni_A 28 QKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQ 78 (133)
T ss_dssp HTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 57799999999999999999 678889999999999999999999886553
No 40
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=93.44 E-value=0.18 Score=38.12 Aligned_cols=50 Identities=20% Similarity=0.310 Sum_probs=44.7
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+.+.++.+.+.| ++.-+..+|.++.+.|++..|...++..++
T Consensus 58 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~ 108 (131)
T 2vyi_A 58 KLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALE 108 (131)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 57899999999999999999 678889999999999999999998887653
No 41
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.43 E-value=0.17 Score=39.23 Aligned_cols=48 Identities=8% Similarity=-0.008 Sum_probs=44.1
Q ss_pred CHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhhC
Q 018358 310 DMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQ 357 (357)
Q Consensus 310 d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yleq 357 (357)
..+.|....++.|.++| ++.-+-..|.++++.|+|.+|+..++.-+++
T Consensus 24 ~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~ 72 (93)
T 3bee_A 24 MTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDS 72 (93)
T ss_dssp CCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 47899999999999999 6899999999999999999999999987764
No 42
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=93.39 E-value=0.2 Score=49.41 Aligned_cols=51 Identities=14% Similarity=0.187 Sum_probs=44.8
Q ss_pred cCcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 306 VRFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 306 lr~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
+..|+++.|+.++++.+.++| ++..+.-+|.+|+++|+|++|+.+++..++
T Consensus 328 ~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~ 379 (457)
T 1kt0_A 328 LKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLE 379 (457)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 367799999999999999999 578889999999999999999999987664
No 43
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=93.27 E-value=0.16 Score=44.18 Aligned_cols=50 Identities=24% Similarity=0.203 Sum_probs=45.6
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
+.|+++.|+...++.+.++| ++.-+.-+|.++.+.|++.+|+..++.-++
T Consensus 17 ~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~ 67 (217)
T 2pl2_A 17 ALGRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVA 67 (217)
T ss_dssp HTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 56799999999999999999 688899999999999999999999887653
No 44
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=93.14 E-value=0.2 Score=37.97 Aligned_cols=50 Identities=12% Similarity=0.178 Sum_probs=44.7
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+...++.+.+.| ++.-+..+|.++.+.|.+.+|+..++..++
T Consensus 16 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~ 66 (131)
T 1elr_A 16 KKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIE 66 (131)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHh
Confidence 46799999999999999999 677889999999999999999998876553
No 45
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=93.08 E-value=0.19 Score=40.09 Aligned_cols=49 Identities=18% Similarity=0.090 Sum_probs=40.1
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQ 355 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yl 355 (357)
..|+++.|+.+.++.+.+.| ++.-+..+|.++.++|++.+|+..++..+
T Consensus 59 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~ 108 (166)
T 1a17_A 59 RTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVV 108 (166)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 56788888888888888888 57777888888888888888888877654
No 46
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=92.99 E-value=0.23 Score=37.10 Aligned_cols=50 Identities=18% Similarity=0.343 Sum_probs=44.7
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
+.|+++.|+.+.++++.+.| ++.-+...|.++++.|++..|...++..++
T Consensus 55 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~ 105 (125)
T 1na0_A 55 KQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALE 105 (125)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 56899999999999999999 677889999999999999999998887653
No 47
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=92.83 E-value=0.25 Score=37.28 Aligned_cols=50 Identities=14% Similarity=0.117 Sum_probs=45.0
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+...++.+.+.| ++.-+..+|.++.+.|.+.+|...++..++
T Consensus 24 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~ 74 (131)
T 2vyi_A 24 KVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAIC 74 (131)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHh
Confidence 46799999999999999999 678889999999999999999999887653
No 48
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=92.77 E-value=0.18 Score=47.48 Aligned_cols=51 Identities=14% Similarity=0.161 Sum_probs=46.2
Q ss_pred cCcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 306 VRFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 306 lr~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
+..|+++.|+..+++.+.++| ++.-+.-+|.+|+++|+|.+|+.+|+..++
T Consensus 241 ~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~ 292 (338)
T 2if4_A 241 IKLKRYDEAIGHCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQK 292 (338)
T ss_dssp HTTTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC
T ss_pred HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 367899999999999999999 678889999999999999999999987653
No 49
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.71 E-value=0.32 Score=37.91 Aligned_cols=51 Identities=20% Similarity=0.124 Sum_probs=44.9
Q ss_pred cCcCCHHHHHHHHHHHhccCCC----hhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 306 VRFGDMRCALAACERLILLESD----AKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 306 lr~~d~~~AL~a~ErlllL~Pd----p~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
...|+++.|+...++.+.+.|+ +.-+..+|.++++.|+|.+|+..++..++
T Consensus 39 ~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~ 93 (148)
T 2dba_A 39 FKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIE 93 (148)
T ss_dssp HTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHh
Confidence 3577999999999999999995 56679999999999999999999887653
No 50
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=92.65 E-value=0.22 Score=42.03 Aligned_cols=50 Identities=22% Similarity=0.149 Sum_probs=46.1
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+...++.+.++| ++.-+..+|.++++.|++.+|+..++..++
T Consensus 49 ~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~ 99 (213)
T 1hh8_A 49 ILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALI 99 (213)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 67899999999999999999 688889999999999999999999987664
No 51
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=92.58 E-value=0.38 Score=46.22 Aligned_cols=51 Identities=22% Similarity=0.262 Sum_probs=46.2
Q ss_pred cCcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 306 VRFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 306 lr~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
...|+++.|+.++++.+.++| ++.-+.-+|.+|+++|.|++|+.+|+..++
T Consensus 284 ~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~ 335 (370)
T 1ihg_A 284 LKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQE 335 (370)
T ss_dssp HHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HhccCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 367899999999999999999 678889999999999999999999987654
No 52
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=92.52 E-value=0.14 Score=44.47 Aligned_cols=49 Identities=16% Similarity=0.131 Sum_probs=32.0
Q ss_pred CcCCHHHHHHHHHHHhccCCChhHHHHHhHHHHHcCChHHHHHHHHHHh
Q 018358 307 RFGDMRCALAACERLILLESDAKELRDYSILLYHCGLYEQSLQYLKFYQ 355 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~Pdp~e~RDrGlLl~~lg~~~~A~~dL~~yl 355 (357)
..|+++.|+.+.++.+.++.++.-+..+|.+|...|++++|+..++..+
T Consensus 130 ~~g~~~~A~~~~~~al~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 178 (217)
T 2pl2_A 130 LLGERDKAEASLKQALALEDTPEIRSALAELYLSMGRLDEALAQYAKAL 178 (217)
T ss_dssp HTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HcCChHHHHHHHHHHHhcccchHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 5666777777777766666335556667777777777777766666544
No 53
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=92.32 E-value=0.32 Score=36.27 Aligned_cols=49 Identities=18% Similarity=0.350 Sum_probs=44.2
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQ 355 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yl 355 (357)
..|+++.|+...++.+...| ++.-+...|.++.+.|.+++|+..++..+
T Consensus 21 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~ 70 (125)
T 1na0_A 21 KQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKAL 70 (125)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 46799999999999999999 67778999999999999999999887655
No 54
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=92.27 E-value=0.31 Score=36.64 Aligned_cols=50 Identities=18% Similarity=0.331 Sum_probs=44.6
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+...+.++.+.| ++.-+...|.++.+.|+++.|...++..++
T Consensus 81 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~ 131 (136)
T 2fo7_A 81 KQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALE 131 (136)
T ss_dssp TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHccHHHHHHHHHHHHc
Confidence 67899999999999999999 677788999999999999999998887653
No 55
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=92.14 E-value=0.25 Score=36.28 Aligned_cols=50 Identities=18% Similarity=0.268 Sum_probs=45.5
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+.+.++.+.+.| ++.-+..+|.++++.|++++|+..++..++
T Consensus 18 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~ 68 (112)
T 2kck_A 18 DAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVIN 68 (112)
T ss_dssp SSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 56799999999999999999 678889999999999999999999987664
No 56
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=92.14 E-value=0.31 Score=38.85 Aligned_cols=50 Identities=16% Similarity=0.072 Sum_probs=45.1
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+...++.+.+.| ++.-+..+|.++.+.|++.+|+..++..++
T Consensus 25 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~ 75 (166)
T 1a17_A 25 KAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIE 75 (166)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 56799999999999999999 678889999999999999999999876553
No 57
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=92.08 E-value=0.27 Score=43.30 Aligned_cols=51 Identities=10% Similarity=0.019 Sum_probs=46.0
Q ss_pred cCcCCHHHHHHHHHHHhccCC-C---hhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 306 VRFGDMRCALAACERLILLES-D---AKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 306 lr~~d~~~AL~a~ErlllL~P-d---p~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
...|+++.|+...+.++...| + +.-+..+|.++++.|.|.+|+..++.+++
T Consensus 26 ~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~ 80 (261)
T 3qky_A 26 YNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQ 80 (261)
T ss_dssp HHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 367899999999999999999 6 56679999999999999999999998874
No 58
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=91.74 E-value=0.17 Score=43.69 Aligned_cols=51 Identities=12% Similarity=0.093 Sum_probs=45.0
Q ss_pred cCcCCHHHHHHHHHHHhccCC-ChhHHHH----------------HhHHHHHcCChHHHHHHHHHHhh
Q 018358 306 VRFGDMRCALAACERLILLES-DAKELRD----------------YSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 306 lr~~d~~~AL~a~ErlllL~P-dp~e~RD----------------rGlLl~~lg~~~~A~~dL~~yle 356 (357)
+..|+++.|+.+.++.+.++| ++.-+.- +|.+|.+.|++++|+..++..++
T Consensus 15 ~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 82 (208)
T 3urz_A 15 IEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQ 82 (208)
T ss_dssp HHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 467899999999999999999 5666666 99999999999999999987664
No 59
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=91.67 E-value=0.21 Score=38.29 Aligned_cols=45 Identities=7% Similarity=-0.015 Sum_probs=39.8
Q ss_pred HHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 312 RCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 312 ~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
+.|+...++.+.++| ++.-+..+|.++++.|.+.+|+..++..++
T Consensus 2 ~~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 47 (115)
T 2kat_A 2 QAITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALD 47 (115)
T ss_dssp CCHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 357889999999999 688899999999999999999999887653
No 60
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=91.57 E-value=0.25 Score=42.78 Aligned_cols=50 Identities=14% Similarity=0.104 Sum_probs=43.8
Q ss_pred CcCCHHHHHHHHHHHhccCCC-hh------------HHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLESD-AK------------ELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~Pd-p~------------e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+.+.++.|.++|+ |. -+-.+|.++..+|+|++|+.+.+.-++
T Consensus 23 ~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~ 85 (159)
T 2hr2_A 23 VAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALH 85 (159)
T ss_dssp HHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 567999999999999999995 21 678999999999999999999887653
No 61
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=91.46 E-value=0.084 Score=41.07 Aligned_cols=49 Identities=16% Similarity=0.015 Sum_probs=40.1
Q ss_pred cCCHHHHHHHHHHHhcc---CC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 308 FGDMRCALAACERLILL---ES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 308 ~~d~~~AL~a~ErlllL---~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
.|+++.|+...++.+.+ +| ++.-+.-+|.+|++.|+|++|+..++.-++
T Consensus 3 ~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~ 55 (117)
T 3k9i_A 3 LGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVK 55 (117)
T ss_dssp ----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 36888999999999999 57 567789999999999999999999887653
No 62
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=91.38 E-value=0.27 Score=37.14 Aligned_cols=50 Identities=18% Similarity=0.264 Sum_probs=44.2
Q ss_pred CcCCHHHHHHHHHHHhccCC-C-------hhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-D-------AKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-d-------p~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+.+.++.+.+.| + +.-+..+|.++.+.|++..|...++..++
T Consensus 50 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~ 107 (131)
T 1elr_A 50 EKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLA 107 (131)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 56899999999999999988 5 66678999999999999999999887653
No 63
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=91.15 E-value=0.33 Score=41.59 Aligned_cols=50 Identities=10% Similarity=-0.135 Sum_probs=45.0
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+...++.+.++| ++.-+..+|.++.+.|.+.+|+..++..++
T Consensus 54 ~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~ 104 (228)
T 4i17_A 54 NIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMKNNQEYIATLTEGIK 104 (228)
T ss_dssp HTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 57899999999999999999 578889999999999999999999887653
No 64
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=91.09 E-value=0.38 Score=41.77 Aligned_cols=51 Identities=14% Similarity=0.046 Sum_probs=45.0
Q ss_pred cCcCCHHHHHHHHHHHhccCC-Ch---hHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 306 VRFGDMRCALAACERLILLES-DA---KELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 306 lr~~d~~~AL~a~ErlllL~P-dp---~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
+..|+++.|+...+.++...| ++ ..+..+|.++++.|.|..|+..++.+++
T Consensus 15 ~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~ 69 (225)
T 2yhc_A 15 LQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIR 69 (225)
T ss_dssp HHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 356799999999999999999 44 4578999999999999999999998875
No 65
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=91.08 E-value=0.41 Score=43.60 Aligned_cols=50 Identities=18% Similarity=0.208 Sum_probs=45.3
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+...++.+.++| ++.-+.-+|.+|+++|++++|+..++..++
T Consensus 50 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 100 (281)
T 2c2l_A 50 KMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYS 100 (281)
T ss_dssp HTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 67899999999999999999 678889999999999999999999987653
No 66
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=90.81 E-value=0.41 Score=39.37 Aligned_cols=50 Identities=12% Similarity=0.098 Sum_probs=44.9
Q ss_pred CcCCH--HHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDM--RCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~--~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|++ +.|+.+.+..+.++| ++.-+..+|.++++.|++..|...++..++
T Consensus 91 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 143 (177)
T 2e2e_A 91 QASQHMTAQTRAMIDKALALDSNEITALMLLASDAFMQANYAQAIELWQKVMD 143 (177)
T ss_dssp HTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHh
Confidence 45787 999999999999999 678889999999999999999999987664
No 67
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=90.77 E-value=0.14 Score=42.08 Aligned_cols=50 Identities=14% Similarity=0.151 Sum_probs=44.7
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|++++|+...+..+..+| .+...-..|.+|++.|.|+.|+..++..++
T Consensus 9 ~~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~ 59 (150)
T 4ga2_A 9 SKADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYIN 59 (150)
T ss_dssp CHHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HcChHHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 45699999999999999999 577778899999999999999999988764
No 68
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=90.72 E-value=0.47 Score=40.04 Aligned_cols=50 Identities=4% Similarity=-0.054 Sum_probs=44.5
Q ss_pred CcCCHHHHHHHHHHHhccCC-Ch----------------hHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DA----------------KELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp----------------~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+...++.+.+.| ++ .-+..+|.++.++|+|.+|+..++..++
T Consensus 50 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~ 116 (198)
T 2fbn_A 50 KKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLK 116 (198)
T ss_dssp HTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 57799999999999999999 67 5678999999999999999999887653
No 69
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=90.62 E-value=0.54 Score=35.23 Aligned_cols=50 Identities=18% Similarity=0.331 Sum_probs=44.3
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+...++++.+.| ++.-+...|.++.+.|.++.|...++..++
T Consensus 47 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~ 97 (136)
T 2fo7_A 47 KQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALE 97 (136)
T ss_dssp HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 46799999999999999999 677788999999999999999998877653
No 70
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=90.49 E-value=0.092 Score=43.88 Aligned_cols=49 Identities=14% Similarity=0.024 Sum_probs=43.2
Q ss_pred cCcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHH
Q 018358 306 VRFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFY 354 (357)
Q Consensus 306 lr~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~y 354 (357)
++.|+++.|+...++.+.++| ++.-+..+|.++.+.|++++|+..++.-
T Consensus 17 ~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a 66 (176)
T 2r5s_A 17 LQQGEHAQALNVIQTLSDELQSRGDVKLAKADCLLETKQFELAQELLATI 66 (176)
T ss_dssp HHTTCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred HHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHh
Confidence 356799999999999999999 6788899999999999999999887643
No 71
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=90.44 E-value=0.84 Score=40.76 Aligned_cols=50 Identities=16% Similarity=0.257 Sum_probs=46.0
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+.+.+..+.+.| ++.-+..+|.++.+.|.+++|...++..++
T Consensus 284 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~ 334 (359)
T 3ieg_A 284 KDEKPVEAIRICSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYEAAQE 334 (359)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 56799999999999999999 688899999999999999999999987664
No 72
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=90.35 E-value=0.48 Score=41.16 Aligned_cols=48 Identities=15% Similarity=0.113 Sum_probs=26.7
Q ss_pred CcCCHHHHHHHHHHHhccCCChhH----HHHHhHHHHHcCChHHHHHHHHHH
Q 018358 307 RFGDMRCALAACERLILLESDAKE----LRDYSILLYHCGLYEQSLQYLKFY 354 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~Pdp~e----~RDrGlLl~~lg~~~~A~~dL~~y 354 (357)
..|+++.|+...++.+...+++.. +..+|.++.+.|.+.+|+..++.-
T Consensus 49 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a 100 (272)
T 3u4t_A 49 ELAKYDLAQKDIETYFSKVNATKAKSADFEYYGKILMKKGQDSLAIQQYQAA 100 (272)
T ss_dssp HTTCHHHHHHHHHHHHTTSCTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 455666666666666662223322 456666666666666666655543
No 73
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=90.32 E-value=0.17 Score=49.22 Aligned_cols=47 Identities=13% Similarity=0.200 Sum_probs=25.6
Q ss_pred CCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHh
Q 018358 309 GDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQ 355 (357)
Q Consensus 309 ~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yl 355 (357)
|+++.|+.+.++.|.++| ++.-+..+|.++.++|++++|+.+++..+
T Consensus 180 g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al 227 (382)
T 2h6f_A 180 RDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLL 227 (382)
T ss_dssp TCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChHHHHHHHHHHH
Confidence 455555555555555555 34555555555555555555555555443
No 74
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=90.28 E-value=0.59 Score=37.34 Aligned_cols=50 Identities=18% Similarity=0.185 Sum_probs=45.1
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+.+.+..+.+.| ++.-+...|.++.+.|++.+|...++..++
T Consensus 122 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~ 172 (186)
T 3as5_A 122 NLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGRHEEALPHFKKANE 172 (186)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 46799999999999999999 678889999999999999999999887654
No 75
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=90.06 E-value=0.42 Score=43.48 Aligned_cols=50 Identities=16% Similarity=-0.060 Sum_probs=45.5
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+...+..+.++| ++.-+..+|.+|.++|+|.+|+.+++.-++
T Consensus 16 ~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~ 66 (281)
T 2c2l_A 16 VGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALE 66 (281)
T ss_dssp HTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 56799999999999999999 688889999999999999999999987653
No 76
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=90.03 E-value=0.57 Score=39.91 Aligned_cols=50 Identities=14% Similarity=0.159 Sum_probs=45.3
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+...++.+.+.| ++.-+..+|.++.+.|.+.+|...++..++
T Consensus 185 ~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 235 (258)
T 3uq3_A 185 KLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASALETLDAART 235 (258)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 57899999999999999999 578889999999999999999999887654
No 77
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=89.90 E-value=0.57 Score=40.52 Aligned_cols=49 Identities=18% Similarity=0.198 Sum_probs=42.5
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQ 355 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yl 355 (357)
..|+++.|+.+.++.+.+.| ++.-+..+|.++.+.|++.+|+..++..+
T Consensus 89 ~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~ 138 (275)
T 1xnf_A 89 QAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFY 138 (275)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 56799999999999999999 67888899999999999999988887654
No 78
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=89.53 E-value=0.46 Score=46.03 Aligned_cols=50 Identities=8% Similarity=0.045 Sum_probs=41.9
Q ss_pred CcCC-HHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGD-MRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d-~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+ ++.|+.+.++.+.++| ++.-+.-+|.++.++|++.+|+..++.-++
T Consensus 143 ~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ 194 (382)
T 2h6f_A 143 SLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILN 194 (382)
T ss_dssp HTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHH
T ss_pred HcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 4564 9999999999999999 577788899999999999999988877654
No 79
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=89.40 E-value=0.29 Score=44.65 Aligned_cols=48 Identities=13% Similarity=-0.079 Sum_probs=42.0
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHH
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFY 354 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~y 354 (357)
+.|+++.|+...++++.++| ++.-+..+|.++.+.|++++|...|+..
T Consensus 129 ~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~ 177 (287)
T 3qou_A 129 QESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTI 177 (287)
T ss_dssp HTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTS
T ss_pred hCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhC
Confidence 56799999999999999999 6788899999999999999998877653
No 80
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=89.26 E-value=0.7 Score=39.30 Aligned_cols=50 Identities=14% Similarity=0.066 Sum_probs=45.6
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+.+.++.+.+.| ++.-+.-+|.++.+.|.+.+|+..++..++
T Consensus 151 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~ 201 (258)
T 3uq3_A 151 TKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIE 201 (258)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 56899999999999999999 688889999999999999999999987653
No 81
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=89.25 E-value=0.69 Score=40.00 Aligned_cols=50 Identities=10% Similarity=0.123 Sum_probs=45.4
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+.+.++.+.+.| ++.-+...|.++.+.|.+.+|+..++.-++
T Consensus 55 ~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~ 105 (275)
T 1xnf_A 55 SLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLE 105 (275)
T ss_dssp HTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHh
Confidence 56799999999999999999 688889999999999999999999887653
No 82
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=89.23 E-value=0.8 Score=36.53 Aligned_cols=50 Identities=8% Similarity=0.103 Sum_probs=44.6
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+...++.+.+.| ++.-+...|.++.+.|.+++|...++..++
T Consensus 88 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~ 138 (186)
T 3as5_A 88 QVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEAIDSFKIALG 138 (186)
T ss_dssp HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHh
Confidence 56799999999999999999 678889999999999999999999887653
No 83
>3isr_A Transglutaminase-like enzymes, putative cysteine; protease, hutchinsoni MCSG, structural genomics; 1.90A {Cytophaga hutchinsonii}
Probab=89.03 E-value=0.58 Score=44.30 Aligned_cols=72 Identities=14% Similarity=0.162 Sum_probs=55.4
Q ss_pred HHHHHHHHHhchhcCCCCCCHHHHHHHHHHHhhhhcCCcCCCCCCCcCCcccccHHHHHhhccCChHHHHHHHHHHHHHh
Q 018358 119 QLDDLSVGYCSHYSSGFRSSPESVLESIERYLFDKKGFRRTNARNQLIEPRSLYLHSVLTHRTGSAVMLSLIYSEILKML 198 (357)
Q Consensus 119 ~Ld~La~~v~~~~~~~~~~~p~~~l~~Ln~~Ly~~~GF~g~~~~~~y~dp~Ns~L~~VLe~R~GiPIsLaiIylevArRL 198 (357)
++.++|.++. ....++.+++++|++++.++..|..... .- ..--.++|+.|+|.+--.|.+++.++|.+
T Consensus 127 ~i~~~A~~~~-----~~~~~~~~~~~ai~~~v~~~~~Y~~~~~--~~----~~~a~~~l~~~~G~C~d~A~l~val~Ra~ 195 (293)
T 3isr_A 127 KLQKLAYKEF-----GKIENVYSKVLAITDWIYNNVEYISGST--NS----QTSAFDTITERAGVCRDFAHLGIALCRAL 195 (293)
T ss_dssp GSHHHHHHHH-----TTCCSHHHHHHHHHHHHHHHSEECTTSC--CT----TCCHHHHHHHCEECHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHh-----ccCCCHHHHHHHHHHHHHhhcEEeccCC--CC----CCCHHHhhcCCcEehHHHHHHHHHHHHHC
Confidence 3566666653 2335667899999999999888775443 21 12346799999999999999999999999
Q ss_pred ccc
Q 018358 199 RIW 201 (357)
Q Consensus 199 glp 201 (357)
|||
T Consensus 196 GIP 198 (293)
T 3isr_A 196 SIP 198 (293)
T ss_dssp TCC
T ss_pred CCC
Confidence 999
No 84
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=88.93 E-value=0.77 Score=38.15 Aligned_cols=48 Identities=19% Similarity=0.180 Sum_probs=29.0
Q ss_pred cCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHh
Q 018358 308 FGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQ 355 (357)
Q Consensus 308 ~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yl 355 (357)
.|+++.|+...+..+.+.| ++.-+...|.++.+.|++.+|...++..+
T Consensus 126 ~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~ 174 (225)
T 2vq2_A 126 QGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYFKKYQ 174 (225)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3466666666666666666 45555666666666666666666555443
No 85
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=88.70 E-value=0.36 Score=39.35 Aligned_cols=50 Identities=10% Similarity=-0.010 Sum_probs=43.0
Q ss_pred CcCCHHHHHHHHHHHhcc------------------CC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILL------------------ES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL------------------~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
+.|+++.|+...+..+.+ .| .+.-+..+|.+|.++|.|..|+.+++.-++
T Consensus 23 ~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~ 91 (162)
T 3rkv_A 23 VQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVLK 91 (162)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHh
Confidence 578999999999999998 55 346678999999999999999999887653
No 86
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=88.67 E-value=0.9 Score=38.06 Aligned_cols=50 Identities=6% Similarity=0.088 Sum_probs=44.7
Q ss_pred CcCCHHHHHHHHHHHhccCC-Ch----------------hHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DA----------------KELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp----------------~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+.+.++.+.+.| ++ .-+..+|.++++.|++..|...++..++
T Consensus 83 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 149 (213)
T 1hh8_A 83 QTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATS 149 (213)
T ss_dssp HTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 57899999999999999888 45 6779999999999999999999987664
No 87
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=88.53 E-value=0.51 Score=41.00 Aligned_cols=47 Identities=13% Similarity=0.199 Sum_probs=29.7
Q ss_pred cCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHH
Q 018358 308 FGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFY 354 (357)
Q Consensus 308 ~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~y 354 (357)
.|+++.|+.+.++.+.+.| ++.-+..+|.++.+.|++.+|+..++..
T Consensus 87 ~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a 134 (272)
T 3u4t_A 87 KGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQ 134 (272)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGG
T ss_pred cccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 4566666666666666666 4555666666666666666666665443
No 88
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=88.50 E-value=0.84 Score=48.26 Aligned_cols=50 Identities=16% Similarity=0.067 Sum_probs=45.6
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
+.|+++.|+.+.++.+.++| ++.-+..+|.+|.++|++++|++.++.-++
T Consensus 55 ~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~ 105 (723)
T 4gyw_A 55 QQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQ 105 (723)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 67899999999999999999 578889999999999999999999887654
No 89
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=88.41 E-value=0.71 Score=42.33 Aligned_cols=49 Identities=18% Similarity=0.201 Sum_probs=37.0
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHH-HHHHHHh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSL-QYLKFYQ 355 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~-~dL~~yl 355 (357)
..|+++.|..+.++.+.++| ++.-+..+|.++.++|.+.+++ ..++..+
T Consensus 212 ~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~ 262 (291)
T 3mkr_A 212 AQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVTNRYLSQLK 262 (291)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 77888888888888888888 6777788888888888887643 4545443
No 90
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=88.20 E-value=1.1 Score=44.54 Aligned_cols=50 Identities=18% Similarity=0.086 Sum_probs=44.3
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
+.|+++.|+...++.+.++| ++.-+..+|.+|.++|++++|.+.++..++
T Consensus 52 ~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~ 102 (477)
T 1wao_1 52 RTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVK 102 (477)
T ss_dssp HTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 56799999999999999999 678889999999999999999999887653
No 91
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=88.06 E-value=0.99 Score=37.45 Aligned_cols=50 Identities=14% Similarity=0.097 Sum_probs=42.5
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHc-CChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHC-GLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~l-g~~~~A~~dL~~yle 356 (357)
..|+++.|+.+.++.+.+.| ++.-+..+|.++... |++.+|...++..++
T Consensus 54 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~ 105 (225)
T 2vq2_A 54 YLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNRPAESMAYFDKALA 105 (225)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHT
T ss_pred HcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHc
Confidence 67889999999999999998 577778899999999 999999888876653
No 92
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=87.96 E-value=0.91 Score=38.78 Aligned_cols=50 Identities=12% Similarity=-0.018 Sum_probs=44.2
Q ss_pred CcCCHHHHHHHHHHHhccCC-Ch-------hHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DA-------KELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp-------~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+.+.++.+.+.| ++ .-+...|.++.+.|++++|+..++.-++
T Consensus 88 ~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~ 145 (228)
T 4i17_A 88 DMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATD 145 (228)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHh
Confidence 56799999999999999999 67 4478999999999999999999887653
No 93
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=87.95 E-value=0.85 Score=41.76 Aligned_cols=50 Identities=16% Similarity=0.185 Sum_probs=40.6
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+.+.++.+.+.| ++.-+..+|.+|.+.|++.+|+..++..++
T Consensus 111 ~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 161 (365)
T 4eqf_A 111 ENENEQAAIVALQRCLELQPNNLKALMALAVSYTNTSHQQDACEALKNWIK 161 (365)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHccccHHHHHHHHHHHHH
Confidence 67888888888888888888 577778888888888888888888776553
No 94
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=87.92 E-value=0.85 Score=40.71 Aligned_cols=50 Identities=18% Similarity=0.167 Sum_probs=40.0
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+...++.+.+.| ++.-+..+|.++.+.|.+.+|+..++..++
T Consensus 49 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~ 99 (359)
T 3ieg_A 49 AMGKSKAALPDLTKVIALKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLK 99 (359)
T ss_dssp HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHT
T ss_pred HccCHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHcCChHHHHHHHHHHHh
Confidence 67788888888888888888 567778888888888888888888776653
No 95
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=87.82 E-value=0.77 Score=42.04 Aligned_cols=50 Identities=12% Similarity=0.088 Sum_probs=44.8
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+.+.++.+.+.| ++.-+..+|.+|.++|++.+|+..++..++
T Consensus 259 ~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 309 (365)
T 4eqf_A 259 NGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCINLGAYREAVSNFLTALS 309 (365)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 67899999999999999999 578889999999999999999999887653
No 96
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=87.68 E-value=0.83 Score=37.45 Aligned_cols=50 Identities=16% Similarity=0.148 Sum_probs=44.2
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHH-HHHcCCh--HHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSIL-LYHCGLY--EQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlL-l~~lg~~--~~A~~dL~~yle 356 (357)
..|+++.|+.+.++.+.+.| ++.-+..+|.+ +++.|.+ .+|+..++..++
T Consensus 56 ~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~ 109 (177)
T 2e2e_A 56 WQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRAMIDKALA 109 (177)
T ss_dssp HTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHH
Confidence 46799999999999999999 68888999999 7799999 999998887653
No 97
>3kd4_A Putative protease; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 2.00A {Parabacteroides distasonis atcc 8503}
Probab=87.62 E-value=1.1 Score=45.35 Aligned_cols=76 Identities=8% Similarity=0.054 Sum_probs=56.9
Q ss_pred HHHHHHHHHhchhcCCCCCCHHHHHHHHHHHhhhhcCCcCCCCCCCcCCcccccHHHHHhhccCChHHHHHHHHHHHHHh
Q 018358 119 QLDDLSVGYCSHYSSGFRSSPESVLESIERYLFDKKGFRRTNARNQLIEPRSLYLHSVLTHRTGSAVMLSLIYSEILKML 198 (357)
Q Consensus 119 ~Ld~La~~v~~~~~~~~~~~p~~~l~~Ln~~Ly~~~GF~g~~~~~~y~dp~Ns~L~~VLe~R~GiPIsLaiIylevArRL 198 (357)
.+.+++.++. ....++.+++++|-++.-++..|.+... .+......-..+||++|.|.+...+.+++.++|.+
T Consensus 229 ~i~~~a~~l~-----~~~~~~~ek~~~iy~~V~~~i~y~~~~~--~~~g~~~~~a~~vl~~~~G~C~d~a~Ll~AllRa~ 301 (506)
T 3kd4_A 229 ESKTFAQFLT-----DKSGNEQEKVNIIRDHILNNLSTCPIPM--AMTGYTVRDIDTVLRSAYGTPLEIAQLLNVMLNAA 301 (506)
T ss_dssp HHHHHHHHHH-----SSCSSHHHHHHHHHHHHHHHCEECCCCG--GGGTTCCCCHHHHHHHTEECHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHH-----hcCCCHHHHHHHHHHHHHhccEecceec--ccCCCCCCCHHHHHHhCCcchHHHHHHHHHHHHHC
Confidence 4455555543 3456888999999999888887765432 22211233488999999999999999999999999
Q ss_pred ccc
Q 018358 199 RIW 201 (357)
Q Consensus 199 glp 201 (357)
|||
T Consensus 302 GIp 304 (506)
T 3kd4_A 302 GIP 304 (506)
T ss_dssp TCC
T ss_pred CCC
Confidence 999
No 98
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=87.30 E-value=1.1 Score=37.84 Aligned_cols=49 Identities=16% Similarity=0.282 Sum_probs=39.0
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQ 355 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yl 355 (357)
..|+++.|+...+..+.+.| ++.-+...|.++++.|++++|+..++..+
T Consensus 137 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~ 186 (243)
T 2q7f_A 137 KLEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGMLDEALSQFAAVT 186 (243)
T ss_dssp HTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 67788888888888888888 56777888888888888888888777654
No 99
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=87.11 E-value=0.98 Score=40.98 Aligned_cols=50 Identities=14% Similarity=0.054 Sum_probs=43.5
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+.+.++.+.+.| ++.-+..+|.++.+.|++.+|...++..++
T Consensus 263 ~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 313 (368)
T 1fch_A 263 NGNQSEEAVAAYRRALELQPGYIRSRYNLGISCINLGAHREAVEHFLEALN 313 (368)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 67899999999999999999 577789999999999999999988877653
No 100
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=87.03 E-value=1.2 Score=37.63 Aligned_cols=50 Identities=12% Similarity=-0.012 Sum_probs=41.9
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+...++.+.+.| ++..+..+|.++.+.|.+++|...++..++
T Consensus 103 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~ 153 (243)
T 2q7f_A 103 VKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQRAVE 153 (243)
T ss_dssp HTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 67889999999999988888 677788889999999999999888876553
No 101
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=87.00 E-value=0.68 Score=48.01 Aligned_cols=50 Identities=12% Similarity=0.042 Sum_probs=45.9
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+...++.+.++| ++..+..+|.+|++.|+|++|+..++.-++
T Consensus 445 ~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~ 495 (681)
T 2pzi_A 445 DLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELLTGDYDSATKHFTEVLD 495 (681)
T ss_dssp HHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 67899999999999999999 688899999999999999999999987653
No 102
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=86.97 E-value=0.72 Score=40.53 Aligned_cols=50 Identities=18% Similarity=0.010 Sum_probs=43.5
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHH-----------------HHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKEL-----------------RDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~-----------------RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+...++++.+.| ++... ..+|.+|++.|+|.+|+..++..++
T Consensus 109 ~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~ 176 (261)
T 3qky_A 109 DQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFD 176 (261)
T ss_dssp CCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 36799999999999999999 55444 6789999999999999999988764
No 103
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=86.95 E-value=1.1 Score=39.53 Aligned_cols=50 Identities=12% Similarity=0.058 Sum_probs=45.0
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+.+.++.+.+.| ++.-+...|.++.+.|++.+|...++..++
T Consensus 218 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 268 (327)
T 3cv0_A 218 NGNRPQEALDAYNRALDINPGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIY 268 (327)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 57899999999999999999 578889999999999999999999887653
No 104
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=86.88 E-value=1.1 Score=37.07 Aligned_cols=49 Identities=10% Similarity=0.017 Sum_probs=40.8
Q ss_pred CcCCHHHHHHHHHHHhccCCC---hhHHHHHhHHHHHcCChHHHHHHHHHHh
Q 018358 307 RFGDMRCALAACERLILLESD---AKELRDYSILLYHCGLYEQSLQYLKFYQ 355 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~Pd---p~e~RDrGlLl~~lg~~~~A~~dL~~yl 355 (357)
..|+++.|+...++++.++|+ +.-+...|.++..+|.+++|+..+..-+
T Consensus 120 ~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~~al 171 (176)
T 2r5s_A 120 QVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASKYRRQL 171 (176)
T ss_dssp HTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred HcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHHHHHHH
Confidence 788999999999999999984 3467888999999999999988876544
No 105
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=86.86 E-value=1.2 Score=38.08 Aligned_cols=50 Identities=10% Similarity=-0.140 Sum_probs=42.5
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+.+.+..+.+.| ++.-+.-.+.++.+.|++.+|...++..++
T Consensus 187 ~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~ 237 (252)
T 2ho1_A 187 KEREYVPARQYYDLFAQGGGQNARSLLLGIRLAKVFEDRDTAASYGLQLKR 237 (252)
T ss_dssp HTTCHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 67899999999999999888 567778889999999999999888877654
No 106
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=86.70 E-value=1.1 Score=41.98 Aligned_cols=51 Identities=16% Similarity=0.252 Sum_probs=46.5
Q ss_pred cCcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 306 VRFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 306 lr~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
.+.|+++.|+...+.++.+.| ++.-+..+|.++.+.|++.+|...++..++
T Consensus 306 ~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~ 357 (450)
T 2y4t_A 306 SKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQE 357 (450)
T ss_dssp HTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHCCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 378999999999999999999 688889999999999999999999988764
No 107
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=86.45 E-value=1 Score=42.74 Aligned_cols=50 Identities=14% Similarity=0.157 Sum_probs=42.9
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+.+.++++.++| ++.-+.-+|.++.++|++.+|+..++..++
T Consensus 51 ~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~ 101 (514)
T 2gw1_A 51 SVGDLKKVVEMSTKALELKPDYSKVLLRRASANEGLGKFADAMFDLSVLSL 101 (514)
T ss_dssp HHTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 67899999999999999999 577788899999999999999988876543
No 108
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=86.45 E-value=1.2 Score=38.11 Aligned_cols=49 Identities=8% Similarity=-0.004 Sum_probs=28.4
Q ss_pred CcCCHHHHHHHHHHHhc--cCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHh
Q 018358 307 RFGDMRCALAACERLIL--LES-DAKELRDYSILLYHCGLYEQSLQYLKFYQ 355 (357)
Q Consensus 307 r~~d~~~AL~a~Erlll--L~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yl 355 (357)
..|+++.|+.+.++++. ..| ++.-+..+|.++.+.|.+++|...++..+
T Consensus 117 ~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~ 168 (252)
T 2ho1_A 117 EQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSL 168 (252)
T ss_dssp HTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 45566666666666666 444 24445556666666666666666555443
No 109
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=86.42 E-value=1.1 Score=44.47 Aligned_cols=51 Identities=16% Similarity=0.071 Sum_probs=46.3
Q ss_pred cCcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 306 VRFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 306 lr~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
...|+++.|+.+.++.+.++| ++.-+..+|.+|.++|+|++|+.+++.-++
T Consensus 17 ~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 68 (477)
T 1wao_1 17 FKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIE 68 (477)
T ss_dssp TTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 367899999999999999999 578889999999999999999999887654
No 110
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=86.07 E-value=1.6 Score=38.60 Aligned_cols=50 Identities=6% Similarity=0.111 Sum_probs=45.3
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+...++.+.+.| ++..+..+|.++.+.|++.+|...++..++
T Consensus 171 ~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 221 (330)
T 3hym_B 171 LTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTAEKWFLDALE 221 (330)
T ss_dssp HTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 56799999999999999999 688889999999999999999998876653
No 111
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=86.01 E-value=1.4 Score=39.92 Aligned_cols=50 Identities=16% Similarity=0.156 Sum_probs=41.2
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+.+.++.+.+.| ++.-+..+|.++...|++.+|+..++..++
T Consensus 110 ~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~ 160 (368)
T 1fch_A 110 ENEQELLAISALRRCLELKPDNQTALMALAVSFTNESLQRQACEILRDWLR 160 (368)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 67888888888888888888 577778888888888888888888876553
No 112
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=85.96 E-value=1.2 Score=42.33 Aligned_cols=50 Identities=12% Similarity=0.012 Sum_probs=45.8
Q ss_pred CcCCHHHHHHHHHHHhccCCChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLESDAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~Pdp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+.+.++++.+.|++.-+..+|.++.+.|.++.|+..++..++
T Consensus 18 ~~g~~~~A~~~~~~al~~~p~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 67 (514)
T 2gw1_A 18 RNKKYDDAIKYYNWALELKEDPVFYSNLSACYVSVGDLKKVVEMSTKALE 67 (514)
T ss_dssp HTSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHhcCccHHHHHhHHHHHHHHhhHHHHHHHHHHHhc
Confidence 46799999999999999999988899999999999999999999987653
No 113
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=85.61 E-value=0.98 Score=39.97 Aligned_cols=49 Identities=14% Similarity=0.209 Sum_probs=44.9
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQ 355 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yl 355 (357)
..|+++.|+.+.++.+.+.| ++.-+...|.++.++|.+.+|+..++..+
T Consensus 248 ~~g~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 297 (330)
T 3hym_B 248 KLKKYAEALDYHRQALVLIPQNASTYSAIGYIHSLMGNFENAVDYFHTAL 297 (330)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCHHHHHHHHHTTT
T ss_pred HhcCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 67899999999999999999 68888999999999999999999887654
No 114
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=85.43 E-value=1 Score=47.58 Aligned_cols=50 Identities=14% Similarity=0.150 Sum_probs=46.2
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+.+.++.+.++| ++.-+.-+|.+|.++|++++|++.++.-++
T Consensus 89 ~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~ 139 (723)
T 4gyw_A 89 EMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALK 139 (723)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 78999999999999999999 678889999999999999999999987654
No 115
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=85.03 E-value=1.5 Score=38.75 Aligned_cols=50 Identities=12% Similarity=0.020 Sum_probs=43.1
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+.+.++.+.+.| ++.-+...|.++.+.|.+.+|+..++..++
T Consensus 67 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~ 117 (327)
T 3cv0_A 67 ENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEHNANAALASLRAWLL 117 (327)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 67899999999999999999 677788899999999999999988877653
No 116
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=84.73 E-value=1.2 Score=43.67 Aligned_cols=51 Identities=10% Similarity=-0.040 Sum_probs=46.5
Q ss_pred cCcCCH-HHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 306 VRFGDM-RCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 306 lr~~d~-~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
...|++ +.|+.+.++.+.++| ++.-+..+|.+|++.|++.+|++.++.-++
T Consensus 113 ~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~ 165 (474)
T 4abn_A 113 NVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFSGALT 165 (474)
T ss_dssp TSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHT
T ss_pred HhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 367899 999999999999999 688899999999999999999999887654
No 117
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=84.62 E-value=1.6 Score=43.34 Aligned_cols=50 Identities=8% Similarity=-0.184 Sum_probs=43.0
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+.+.++.+.++| ++.-+..+|.+|.+.|++++|.+.++..++
T Consensus 69 ~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 119 (568)
T 2vsy_A 69 TQQRHAEAAVLLQQASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQ 119 (568)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 67899999999999999999 677888899999999999999988877653
No 118
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=84.19 E-value=1.5 Score=41.05 Aligned_cols=50 Identities=18% Similarity=0.164 Sum_probs=40.9
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+...++++.+.| ++.-+..+|.+|.++|++.+|+..++..++
T Consensus 72 ~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~ 122 (450)
T 2y4t_A 72 AMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLK 122 (450)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 67888888888888888888 567778888888888888888888876553
No 119
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=84.18 E-value=1.9 Score=33.99 Aligned_cols=49 Identities=6% Similarity=0.043 Sum_probs=40.8
Q ss_pred CcCCHHHHHHHHHHHhccCC-Chh-------HHHHHhHHHHHcCChHHHHHHHHHHh
Q 018358 307 RFGDMRCALAACERLILLES-DAK-------ELRDYSILLYHCGLYEQSLQYLKFYQ 355 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~-------e~RDrGlLl~~lg~~~~A~~dL~~yl 355 (357)
..|+++.|+..+++.+.+.| ++. -+--+|.++..+|++..|+..++.-+
T Consensus 54 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal 110 (127)
T 4gcn_A 54 EEKKFAECVQFCEKAVEVGRETRADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSL 110 (127)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 67899999999999999998 432 34567899999999999999887654
No 120
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=83.98 E-value=0.72 Score=44.32 Aligned_cols=46 Identities=13% Similarity=0.164 Sum_probs=40.8
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHH
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLK 352 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~ 352 (357)
..|+++.|+.+.++.+.++| ++.-+..+|.++.++|++.+|+..++
T Consensus 71 ~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~ 117 (537)
T 3fp2_A 71 STGDLEKVIEFTTKALEIKPDHSKALLRRASANESLGNFTDAMFDLS 117 (537)
T ss_dssp HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 67899999999999999999 57778889999999999999998886
No 121
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=83.93 E-value=1.1 Score=38.67 Aligned_cols=46 Identities=9% Similarity=0.131 Sum_probs=40.6
Q ss_pred CHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcC-----------ChHHHHHHHHHHh
Q 018358 310 DMRCALAACERLILLES-DAKELRDYSILLYHCG-----------LYEQSLQYLKFYQ 355 (357)
Q Consensus 310 d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg-----------~~~~A~~dL~~yl 355 (357)
.++.|+.+.++.|.++| ++..+...|.+|..+| +|++|++.++.=+
T Consensus 61 ~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl 118 (158)
T 1zu2_A 61 MIQEAITKFEEALLIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAV 118 (158)
T ss_dssp HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHH
Confidence 47799999999999999 5788999999999985 8999999887654
No 122
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=83.92 E-value=1.5 Score=43.51 Aligned_cols=50 Identities=14% Similarity=-0.049 Sum_probs=45.8
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHc---CChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHC---GLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~l---g~~~~A~~dL~~yle 356 (357)
..|+++.|+.+.++.+.++| ++.-+..+|.++.++ |.+++|.+.++..++
T Consensus 103 ~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~ 156 (568)
T 2vsy_A 103 DAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLCDWRALDVLSAQVRAAVA 156 (568)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccHHHHHHHHHHHHh
Confidence 78999999999999999999 678889999999999 999999999987654
No 123
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=83.72 E-value=1.8 Score=39.95 Aligned_cols=50 Identities=14% Similarity=0.088 Sum_probs=42.9
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+...++++.+.| ++.-+..+|.++.+.|++++|+..++..++
T Consensus 317 ~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 367 (388)
T 1w3b_A 317 EQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIR 367 (388)
T ss_dssp TTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 67899999999999999998 577788899999999999999988887654
No 124
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=83.46 E-value=1.9 Score=40.35 Aligned_cols=50 Identities=6% Similarity=0.085 Sum_probs=44.3
Q ss_pred CcCCHHHHHHHHHHHhccCC-C---------------hhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-D---------------AKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-d---------------p~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+.+.++.+.+.| + ..-+..+|.+|.++|+|.+|+..++.-++
T Consensus 159 ~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 224 (336)
T 1p5q_A 159 KEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALE 224 (336)
T ss_dssp HHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 56799999999999999999 5 36779999999999999999999887653
No 125
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=82.29 E-value=2.3 Score=39.27 Aligned_cols=49 Identities=14% Similarity=0.114 Sum_probs=31.9
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQ 355 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yl 355 (357)
+.|+++.|+.+.++++.+.| ++..+..+|.++.+.|.+++|+..++..+
T Consensus 283 ~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 332 (388)
T 1w3b_A 283 EKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKAL 332 (388)
T ss_dssp HHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 45666666666666666666 45556666666666666666666665543
No 126
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=82.27 E-value=1.9 Score=37.15 Aligned_cols=50 Identities=8% Similarity=-0.015 Sum_probs=42.4
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHH-----------------HHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKEL-----------------RDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~-----------------RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+...++++...| ++.-. ...|.+|++.|.|.+|+..++..++
T Consensus 108 ~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~ 175 (225)
T 2yhc_A 108 DPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLR 175 (225)
T ss_dssp CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHH
Confidence 46799999999999999999 45322 4679999999999999999998775
No 127
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=82.20 E-value=2.1 Score=39.04 Aligned_cols=50 Identities=12% Similarity=-0.090 Sum_probs=45.0
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+.+.++++...| ++..+..+|.++.++|++++|...|+.-++
T Consensus 178 ~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~ 228 (291)
T 3mkr_A 178 GGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALD 228 (291)
T ss_dssp CTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 45899999999999999999 688889999999999999999999887553
No 128
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=81.31 E-value=0.7 Score=39.91 Aligned_cols=49 Identities=12% Similarity=0.090 Sum_probs=42.2
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChH----------HHHHHHHHHh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYE----------QSLQYLKFYQ 355 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~----------~A~~dL~~yl 355 (357)
|.+.++.|+.+.++.+.++| ++..+--.|.++.+++++. +|+..|+.-+
T Consensus 14 r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL 73 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEAL 73 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHH
Confidence 45589999999999999999 7888899999999998864 8888877654
No 129
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=80.61 E-value=1.5 Score=39.74 Aligned_cols=46 Identities=15% Similarity=0.088 Sum_probs=28.1
Q ss_pred CHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHh
Q 018358 310 DMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQ 355 (357)
Q Consensus 310 d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yl 355 (357)
+.+.|+...++.+.++| ++..+..+|.+|.+.|++++|++.|+..+
T Consensus 200 ~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l 246 (287)
T 3qou_A 200 ADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHL 246 (287)
T ss_dssp TSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 34445566666666666 45556666666666666666666665543
No 130
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=80.52 E-value=2.2 Score=38.68 Aligned_cols=49 Identities=10% Similarity=0.040 Sum_probs=28.8
Q ss_pred CcCCHHHHHHHHHHHhcc---CCC-h-hHHHHHhHHHHHcCChHHHHHHHHHHh
Q 018358 307 RFGDMRCALAACERLILL---ESD-A-KELRDYSILLYHCGLYEQSLQYLKFYQ 355 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL---~Pd-p-~e~RDrGlLl~~lg~~~~A~~dL~~yl 355 (357)
+.|++++|..+.++.+.. +|+ . ..+..++.++.+.|++..|...++..+
T Consensus 215 ~~g~~~~A~~~~~~al~~~~l~p~~~~~l~~~~~~~~~~~g~~~~a~~~~~~a~ 268 (308)
T 2ond_A 215 HLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGDLASILKVEKRRF 268 (308)
T ss_dssp TTCCHHHHHHHHHHHHHSSSSCGGGCHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 456666666666666664 332 2 334555666666666666666555443
No 131
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=80.27 E-value=1.5 Score=42.99 Aligned_cols=47 Identities=13% Similarity=-0.013 Sum_probs=35.8
Q ss_pred CCHHHHHHHHHHHhccCC---C-hhHHHHHhHHHHHcCChHHHHHHHHHHh
Q 018358 309 GDMRCALAACERLILLES---D-AKELRDYSILLYHCGLYEQSLQYLKFYQ 355 (357)
Q Consensus 309 ~d~~~AL~a~ErlllL~P---d-p~e~RDrGlLl~~lg~~~~A~~dL~~yl 355 (357)
|+++.|+.+.++.+.++| + +.-+..+|.+|.++|+|++|+..++..+
T Consensus 235 g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 285 (474)
T 4abn_A 235 KISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAA 285 (474)
T ss_dssp HHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 678888888888888877 4 5667778888888888888877776654
No 132
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=80.19 E-value=2.6 Score=41.11 Aligned_cols=50 Identities=18% Similarity=0.177 Sum_probs=46.4
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
+.|+++.|+.+.++++.+.| ++.-+.-+|.+|.+.|++++|.+.++..++
T Consensus 528 ~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~ 578 (597)
T 2xpi_A 528 KLKMYDAAIDALNQGLLLSTNDANVHTAIALVYLHKKIPGLAITHLHESLA 578 (597)
T ss_dssp HTTCHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 78999999999999999999 788899999999999999999999987654
No 133
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=79.58 E-value=2.9 Score=40.03 Aligned_cols=47 Identities=11% Similarity=0.075 Sum_probs=23.7
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHH
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKF 353 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~ 353 (357)
..|+++.|+.+.+.++.+.| ++..+.-+|.++.+.|.+.+|...++.
T Consensus 356 ~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 403 (537)
T 3fp2_A 356 KQGKFTESEAFFNETKLKFPTLPEVPTFFAEILTDRGDFDTAIKQYDI 403 (537)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 44455555555555555555 344444455555555555555554443
No 134
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=79.39 E-value=2.2 Score=41.76 Aligned_cols=51 Identities=6% Similarity=0.079 Sum_probs=44.8
Q ss_pred cCcCCHHHHHHHHHHHhccCC-C---------------hhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 306 VRFGDMRCALAACERLILLES-D---------------AKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 306 lr~~d~~~AL~a~ErlllL~P-d---------------p~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
...|+++.|+...++.+.+.| + ...+..+|.+|+++|+|.+|+.+++.-++
T Consensus 279 ~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 345 (457)
T 1kt0_A 279 FKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALG 345 (457)
T ss_dssp HHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 367899999999999999999 5 36678999999999999999999887653
No 135
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=78.99 E-value=3.3 Score=42.83 Aligned_cols=51 Identities=10% Similarity=-0.129 Sum_probs=45.5
Q ss_pred cCcCCHHHHHHHHHHHh--------ccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 306 VRFGDMRCALAACERLI--------LLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 306 lr~~d~~~AL~a~Erll--------lL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
+..|+++.|+.+.++.+ .++| ++..+..+|.+|++.|+|++|+..++..++
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~ 461 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLAE 461 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhc
Confidence 67899999999999999 8999 578889999999999999999999987664
No 136
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=78.23 E-value=3.5 Score=38.06 Aligned_cols=49 Identities=22% Similarity=0.273 Sum_probs=40.0
Q ss_pred CcCCHHHHHHHHHHHhccCC-Ch----hHHHHHhHHHHHcCChHHHHHHHHHHh
Q 018358 307 RFGDMRCALAACERLILLES-DA----KELRDYSILLYHCGLYEQSLQYLKFYQ 355 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp----~e~RDrGlLl~~lg~~~~A~~dL~~yl 355 (357)
..|+++.|+...++.+.+.| ++ .-+..+|.++++.|++..|...++..+
T Consensus 60 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 113 (411)
T 4a1s_A 60 NAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDL 113 (411)
T ss_dssp HTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 56789999999999999988 55 346788999999999999988877554
No 137
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=77.97 E-value=0.36 Score=35.88 Aligned_cols=45 Identities=13% Similarity=0.183 Sum_probs=37.4
Q ss_pred CcCCHHHHHHHHHHHhccCC-C------hhHHHHHhHHHHHcCChHHHHHHH
Q 018358 307 RFGDMRCALAACERLILLES-D------AKELRDYSILLYHCGLYEQSLQYL 351 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-d------p~e~RDrGlLl~~lg~~~~A~~dL 351 (357)
..|+++.|+.+.++.+.++| + +.-+.-+|.++..+|.+..|+.++
T Consensus 50 ~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 101 (111)
T 2l6j_A 50 KLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQYRLELAQGAVGSVQIPVVEV 101 (111)
T ss_dssp HTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHHHHHHHHHHHHCCCCCSSSS
T ss_pred HhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHHhHhhhHhHH
Confidence 67899999999999999999 5 555677888888888887776544
No 138
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=77.73 E-value=1.9 Score=41.24 Aligned_cols=50 Identities=4% Similarity=-0.006 Sum_probs=44.1
Q ss_pred CcCCHHHHHHHHHHHhc----------------cCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLIL----------------LES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~Erlll----------------L~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
+.|+++.|+.+.++.+. +.| ++.-+..+|.+|+++|.|.+|+.+++.-++
T Consensus 235 ~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 301 (370)
T 1ihg_A 235 KSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALE 301 (370)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 57799999999999998 777 567789999999999999999999987664
No 139
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=76.99 E-value=4.8 Score=34.27 Aligned_cols=50 Identities=14% Similarity=0.092 Sum_probs=41.5
Q ss_pred CcCCHHHHHHHHHHHhcc--------CC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILL--------ES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL--------~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+.+.+..+.+ .| ...-+...|.++.+.|++++|...++..++
T Consensus 139 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~ 197 (283)
T 3edt_B 139 NQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILT 197 (283)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 345999999999999988 44 345678999999999999999999887653
No 140
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=76.54 E-value=4 Score=39.82 Aligned_cols=48 Identities=10% Similarity=0.126 Sum_probs=27.3
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHH
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFY 354 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~y 354 (357)
..|+++.|+.+.+.++.+.| ++.-+...|.+|.+.|++++|.+.++..
T Consensus 453 ~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~ 501 (597)
T 2xpi_A 453 QLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSDMQTAINHFQNA 501 (597)
T ss_dssp HHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 44555556666665555555 4555555566666666666665555443
No 141
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=76.48 E-value=3.8 Score=36.96 Aligned_cols=50 Identities=12% Similarity=-0.106 Sum_probs=43.0
Q ss_pred CcCCHHHHHHHHHHHhccCCC-hh-------HHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLESD-AK-------ELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~Pd-p~-------e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+.+.++.+.+.|+ +. -+.-.|+++..+|++.+|...++.+++
T Consensus 170 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 227 (292)
T 1qqe_A 170 LDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQS 227 (292)
T ss_dssp HTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGC
T ss_pred HhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 568999999999999999984 32 346789999999999999999988764
No 142
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=76.14 E-value=5.1 Score=34.85 Aligned_cols=48 Identities=17% Similarity=0.243 Sum_probs=32.4
Q ss_pred CcCCHHHHHHHHHHHhccCC-Ch----hHHHHHhHHHHHcCChHHHHHHHHHH
Q 018358 307 RFGDMRCALAACERLILLES-DA----KELRDYSILLYHCGLYEQSLQYLKFY 354 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp----~e~RDrGlLl~~lg~~~~A~~dL~~y 354 (357)
..|+++.|+...++.+.+.| ++ .-+...|.++++.|.+..|...++..
T Consensus 17 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 69 (338)
T 3ro2_A 17 KSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHD 69 (338)
T ss_dssp HTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 45577777777777777777 43 23457777777777777777766543
No 143
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=76.10 E-value=4.9 Score=34.19 Aligned_cols=50 Identities=22% Similarity=0.299 Sum_probs=41.1
Q ss_pred CcCCHHHHHHHHHHHhccC--------C-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLE--------S-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~--------P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+...++.+.+. | ...-+...|.+++..|++++|...++..++
T Consensus 97 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 155 (283)
T 3edt_B 97 KRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALE 155 (283)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4569999999999998882 4 245679999999999999999998887653
No 144
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=76.06 E-value=6.3 Score=38.70 Aligned_cols=48 Identities=19% Similarity=0.290 Sum_probs=39.7
Q ss_pred CcCCHHHHHHHHHHHhc-----cCC-Ch---hHHHHHhHHHHHcCChHHHHHHHHHH
Q 018358 307 RFGDMRCALAACERLIL-----LES-DA---KELRDYSILLYHCGLYEQSLQYLKFY 354 (357)
Q Consensus 307 r~~d~~~AL~a~Erlll-----L~P-dp---~e~RDrGlLl~~lg~~~~A~~dL~~y 354 (357)
..|+|+.|+...++.|. +.| || ..+-..|.+|.+.|.|++|...++.=
T Consensus 341 ~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~A 397 (429)
T 3qwp_A 341 NLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLA 397 (429)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 56899999999998885 446 66 45689999999999999999877653
No 145
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=75.94 E-value=5.7 Score=30.37 Aligned_cols=50 Identities=16% Similarity=0.146 Sum_probs=41.3
Q ss_pred CcCCHHHHHHHHHHHhccCCC-hh------HHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLESD-AK------ELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~Pd-p~------e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+...+..+.+.+. .. -....|.++...|++++|...++..++
T Consensus 61 ~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 117 (164)
T 3ro3_A 61 FLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLA 117 (164)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 678999999999999999884 42 246789999999999999998886553
No 146
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=73.89 E-value=7.2 Score=29.76 Aligned_cols=50 Identities=8% Similarity=0.060 Sum_probs=43.0
Q ss_pred CcCCHHHHHHHHHHHhccCCCh-------hHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLESDA-------KELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~Pdp-------~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+...++.+.+.+.. .-..-.|.++.+.|.+.+|...++..++
T Consensus 101 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 157 (164)
T 3ro3_A 101 LLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLE 157 (164)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 6789999999999999998883 2357789999999999999999987654
No 147
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=73.61 E-value=8.6 Score=37.92 Aligned_cols=48 Identities=15% Similarity=-0.020 Sum_probs=39.4
Q ss_pred CcCCHHHHHHHHHHHhc-----cCC-Ch---hHHHHHhHHHHHcCChHHHHHHHHHH
Q 018358 307 RFGDMRCALAACERLIL-----LES-DA---KELRDYSILLYHCGLYEQSLQYLKFY 354 (357)
Q Consensus 307 r~~d~~~AL~a~Erlll-----L~P-dp---~e~RDrGlLl~~lg~~~~A~~dL~~y 354 (357)
..|+|+.|+...++.|. +.| || ..+-..|.+|.+.|.|++|...++.=
T Consensus 352 ~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~A 408 (433)
T 3qww_A 352 YMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKA 408 (433)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 56899999999998885 456 66 45689999999999999998877643
No 148
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=73.21 E-value=3.7 Score=38.37 Aligned_cols=51 Identities=12% Similarity=0.069 Sum_probs=44.1
Q ss_pred cCcCCHHHHHHHHHHHhccCCC-h-----------------hHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 306 VRFGDMRCALAACERLILLESD-A-----------------KELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 306 lr~~d~~~AL~a~ErlllL~Pd-p-----------------~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
...|+++.|+.+.++.+.+.|+ + .-+..+|.+|.++|+|.+|+..++.-++
T Consensus 190 ~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 258 (338)
T 2if4_A 190 FKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLT 258 (338)
T ss_dssp CSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHH
T ss_pred HhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4678999999999999999994 4 2668899999999999999999887553
No 149
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=73.13 E-value=7.3 Score=34.98 Aligned_cols=48 Identities=17% Similarity=-0.017 Sum_probs=40.5
Q ss_pred CCHHHHHHHHHHHhccCC-C--h----hHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 309 GDMRCALAACERLILLES-D--A----KELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 309 ~d~~~AL~a~ErlllL~P-d--p----~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
|+++.|+.+.++.+.+.| + + .-+...|.++.++|+|.+|+..++.-++
T Consensus 132 g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 186 (292)
T 1qqe_A 132 HDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIK 186 (292)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 599999999999999988 3 2 2367889999999999999998876543
No 150
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=73.11 E-value=3 Score=35.70 Aligned_cols=49 Identities=18% Similarity=0.225 Sum_probs=40.4
Q ss_pred cCCHHHHHHHHHHHhccC-C-C-hhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 308 FGDMRCALAACERLILLE-S-D-AKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 308 ~~d~~~AL~a~ErlllL~-P-d-p~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
+++.++++...|.++..+ | + ..-+.-.|+.+|++|+|..|++.++..++
T Consensus 48 ~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ 99 (152)
T 1pc2_A 48 NDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQ 99 (152)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHh
Confidence 348889999999999887 6 3 34457789999999999999999988775
No 151
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=71.95 E-value=3.7 Score=41.82 Aligned_cols=47 Identities=9% Similarity=0.116 Sum_probs=41.6
Q ss_pred CHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcC-ChHHHHHHHHHHhh
Q 018358 310 DMRCALAACERLILLES-DAKELRDYSILLYHCG-LYEQSLQYLKFYQA 356 (357)
Q Consensus 310 d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg-~~~~A~~dL~~yle 356 (357)
+|+.|+.++++++.++| +...|--||.++.++| .+++|+++.+..++
T Consensus 124 ~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~ 172 (567)
T 1dce_A 124 NWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLIT 172 (567)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTT
T ss_pred cHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 78999999999999999 6788999999999999 89988888766554
No 152
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=71.39 E-value=4.7 Score=35.05 Aligned_cols=50 Identities=14% Similarity=0.095 Sum_probs=42.3
Q ss_pred CcCCHHHHHHHHHHHhcc--------CC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILL--------ES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL--------~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+++.|+.+.++.+.+ .| .+.-+.-.|.++.+.|++++|...++..++
T Consensus 165 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 223 (311)
T 3nf1_A 165 NQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILT 223 (311)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 567999999999999988 44 345678999999999999999999877653
No 153
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=71.14 E-value=6 Score=37.20 Aligned_cols=48 Identities=10% Similarity=0.032 Sum_probs=41.6
Q ss_pred CCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChH--HHHHHHHHHhh
Q 018358 309 GDMRCALAACERLILLES-DAKELRDYSILLYHCGLYE--QSLQYLKFYQA 356 (357)
Q Consensus 309 ~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~--~A~~dL~~yle 356 (357)
++++.+|.+++.++..+| +..-|--||.++.++|.++ ++++..+..++
T Consensus 124 ~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~ 174 (306)
T 3dra_A 124 FDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVID 174 (306)
T ss_dssp CCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHH
Confidence 689999999999999999 6777899999999999998 88887776654
No 154
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=70.65 E-value=4.9 Score=28.24 Aligned_cols=36 Identities=17% Similarity=0.238 Sum_probs=32.0
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcC
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCG 342 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg 342 (357)
..|+++.|+...++.+.++| ++.-+..+|.++.+.|
T Consensus 55 ~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 55 KQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQG 91 (91)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHC
T ss_pred HHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcC
Confidence 57899999999999999999 6788889999988765
No 155
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=69.75 E-value=5.3 Score=29.84 Aligned_cols=32 Identities=6% Similarity=-0.065 Sum_probs=27.0
Q ss_pred CC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 325 ES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 325 ~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
+| ++..+..+|.++++.|+|.+|+..++..++
T Consensus 3 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 35 (100)
T 3ma5_A 3 DPEDPFTRYALAQEHLKHDNASRALALFEELVE 35 (100)
T ss_dssp --CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 57 678889999999999999999999987664
No 156
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=69.69 E-value=8.2 Score=34.96 Aligned_cols=47 Identities=17% Similarity=0.268 Sum_probs=31.2
Q ss_pred CcCCHHHHHHHHHHHhccCC-Ch----hHHHHHhHHHHHcCChHHHHHHHHH
Q 018358 307 RFGDMRCALAACERLILLES-DA----KELRDYSILLYHCGLYEQSLQYLKF 353 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp----~e~RDrGlLl~~lg~~~~A~~dL~~ 353 (357)
..|+++.|+...++.+.+.| ++ .-+..+|.++++.|.+..|...++.
T Consensus 21 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 72 (406)
T 3sf4_A 21 KSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHH 72 (406)
T ss_dssp HTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 34577777777777777776 43 2346677777777777777766554
No 157
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=69.68 E-value=12 Score=33.88 Aligned_cols=49 Identities=10% Similarity=-0.002 Sum_probs=41.8
Q ss_pred CcCCHHHHHHHHHHHhccCC-Chh------HHHHHhHHHHHcCChHHHHHHHHHHh
Q 018358 307 RFGDMRCALAACERLILLES-DAK------ELRDYSILLYHCGLYEQSLQYLKFYQ 355 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~------e~RDrGlLl~~lg~~~~A~~dL~~yl 355 (357)
..|+++.|+.+.++.+.+.| .+. -+.-.|+++..+|++.+|+..++.++
T Consensus 167 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al 222 (307)
T 2ifu_A 167 RQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY 222 (307)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 67899999999999999999 642 34667888888999999999998765
No 158
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=68.32 E-value=9.3 Score=34.45 Aligned_cols=50 Identities=12% Similarity=0.045 Sum_probs=41.0
Q ss_pred CcCCHHHHHHHHHHHhccCC-Chh-HHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAK-ELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~-e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
+.|+++.|..+.++.+.+.| ++. -+-.+|.++.+.|.+++|...++.-++
T Consensus 111 ~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~ 162 (308)
T 2ond_A 111 SRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKARE 162 (308)
T ss_dssp HTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHT
T ss_pred hcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 57788999999999999888 565 678888888888999988888776543
No 159
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=67.00 E-value=8.2 Score=36.23 Aligned_cols=46 Identities=13% Similarity=-0.169 Sum_probs=35.7
Q ss_pred CHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcC--ChHHHHHHHHHHh
Q 018358 310 DMRCALAACERLILLES-DAKELRDYSILLYHCG--LYEQSLQYLKFYQ 355 (357)
Q Consensus 310 d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg--~~~~A~~dL~~yl 355 (357)
..++||.+++.+|.++| +..-|--||.++.++| .+++|+..++.-+
T Consensus 48 ~s~~aL~~t~~~L~~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L 96 (306)
T 3dra_A 48 YSERALHITELGINELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIA 96 (306)
T ss_dssp CSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHH
Confidence 45678888888888888 4666788888888888 8888877766544
No 160
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=66.64 E-value=10 Score=37.04 Aligned_cols=49 Identities=12% Similarity=0.031 Sum_probs=38.1
Q ss_pred cCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 308 FGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 308 ~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
.|+++.|..+.|+++...| ++.-|..+|-++.+.|.++.|..-++..++
T Consensus 25 ~~~~~~a~~~~e~al~~~P~~~~~w~~~~~~~~~~~~~~~a~~~~~ral~ 74 (530)
T 2ooe_A 25 NQPIDKARKTYERLVAQFPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLM 74 (530)
T ss_dssp SSCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred hCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHh
Confidence 5678888888888888888 567778888888888888888777776553
No 161
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=66.03 E-value=15 Score=36.72 Aligned_cols=48 Identities=13% Similarity=0.067 Sum_probs=38.9
Q ss_pred CcCCHHHHHHHHHHHhc-----cCC-Ch---hHHHHHhHHHHHcCChHHHHHHHHHH
Q 018358 307 RFGDMRCALAACERLIL-----LES-DA---KELRDYSILLYHCGLYEQSLQYLKFY 354 (357)
Q Consensus 307 r~~d~~~AL~a~Erlll-----L~P-dp---~e~RDrGlLl~~lg~~~~A~~dL~~y 354 (357)
..|+|+.|+...++.|. +.| || ..+-..|.+|.+.|.|++|...++.=
T Consensus 363 ~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~A 419 (490)
T 3n71_A 363 YLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKA 419 (490)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 56899999998888775 456 66 45689999999999999998877643
No 162
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=65.96 E-value=11 Score=32.68 Aligned_cols=48 Identities=15% Similarity=0.157 Sum_probs=39.1
Q ss_pred cCCHHHHHHHHHHHhcc--------CC-ChhHHHHHhHHHHHcCChHHHHHHHHHHh
Q 018358 308 FGDMRCALAACERLILL--------ES-DAKELRDYSILLYHCGLYEQSLQYLKFYQ 355 (357)
Q Consensus 308 ~~d~~~AL~a~ErlllL--------~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yl 355 (357)
.|+++.|+...++.+.+ .| ...-+...|.++...|++.+|...++..+
T Consensus 40 ~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 96 (311)
T 3nf1_A 40 QGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDAL 96 (311)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 34888999999888886 34 35667899999999999999998887655
No 163
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=65.94 E-value=6.9 Score=31.85 Aligned_cols=49 Identities=10% Similarity=0.098 Sum_probs=39.5
Q ss_pred CcCCHHHHHHHHHHHhccC------C-ChhHHHHHhHHHHHcCChHHHHHHHHHHh
Q 018358 307 RFGDMRCALAACERLILLE------S-DAKELRDYSILLYHCGLYEQSLQYLKFYQ 355 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~------P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yl 355 (357)
..|+++.|+...++.+.+. | ...-+...|.++...|++++|...++.-+
T Consensus 38 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 93 (203)
T 3gw4_A 38 FMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEER 93 (203)
T ss_dssp HTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 5679999999999888843 2 23556889999999999999998887654
No 164
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=65.86 E-value=3.6 Score=38.63 Aligned_cols=46 Identities=7% Similarity=-0.082 Sum_probs=25.6
Q ss_pred CcCCHHHHHHHHHHHhccCCCh---h-HHHHHhHHHHHcCChHHHHHHHHH
Q 018358 307 RFGDMRCALAACERLILLESDA---K-ELRDYSILLYHCGLYEQSLQYLKF 353 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~Pdp---~-e~RDrGlLl~~lg~~~~A~~dL~~ 353 (357)
+.|+|+.|+...+..+... || . -.-=.|.++.++|++.+|+..|+.
T Consensus 147 ~~~r~~dA~~~l~~a~~~~-d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~ 196 (282)
T 4f3v_A 147 AAERWTDVIDQVKSAGKWP-DKFLAGAAGVAHGVAAANLALFTEAERRLTE 196 (282)
T ss_dssp HTTCHHHHHHHHTTGGGCS-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHhhccC-CcccHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 5566666666666444332 22 1 234456666666666666666654
No 165
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=65.15 E-value=11 Score=32.53 Aligned_cols=49 Identities=16% Similarity=0.093 Sum_probs=36.7
Q ss_pred CcCCHHHHHHHHHHHhccC------C-ChhHHHHHhHHHHHcCChHHHHHHHHHHh
Q 018358 307 RFGDMRCALAACERLILLE------S-DAKELRDYSILLYHCGLYEQSLQYLKFYQ 355 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~------P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yl 355 (357)
..|+++.|+...++.+.+. | ...-+...|.++...|.+.+|...++..+
T Consensus 55 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 110 (338)
T 3ro2_A 55 YLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHL 110 (338)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 4568888888888877763 2 13456888999999999999988776544
No 166
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=64.77 E-value=9.6 Score=35.00 Aligned_cols=49 Identities=16% Similarity=0.131 Sum_probs=40.4
Q ss_pred CcCCHHHHHHHHHHHhcc------CC-ChhHHHHHhHHHHHcCChHHHHHHHHHHh
Q 018358 307 RFGDMRCALAACERLILL------ES-DAKELRDYSILLYHCGLYEQSLQYLKFYQ 355 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL------~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yl 355 (357)
..|+++.|+...++.+.+ .| ...-+..+|.++.+.|.+.+|...++.-+
T Consensus 98 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 153 (411)
T 4a1s_A 98 YLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHL 153 (411)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 467999999999998887 34 34667899999999999999998887644
No 167
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=64.58 E-value=9.9 Score=37.13 Aligned_cols=47 Identities=13% Similarity=-0.068 Sum_probs=42.4
Q ss_pred CcCCHHHHHHHHHHHhccCCChhHHHHHhHHHHHcCChHHHHHHHHH
Q 018358 307 RFGDMRCALAACERLILLESDAKELRDYSILLYHCGLYEQSLQYLKF 353 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~Pdp~e~RDrGlLl~~lg~~~~A~~dL~~ 353 (357)
-.|+++.|+...+|.+.|+|++..+=-+|.++.-.|++++|++.++.
T Consensus 289 ~~gd~d~A~~~l~rAl~Ln~s~~a~~llG~~~~~~G~~~eA~e~~~~ 335 (372)
T 3ly7_A 289 VKGKTDESYQAINTGIDLEMSWLNYVLLGKVYEMKGMNREAADAYLT 335 (372)
T ss_dssp HHTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 45899999999999999999877777889999999999999988864
No 168
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=59.74 E-value=19 Score=33.17 Aligned_cols=49 Identities=20% Similarity=0.202 Sum_probs=40.3
Q ss_pred CcCCHHHHHHHHHHHhc-----cCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHh
Q 018358 307 RFGDMRCALAACERLIL-----LES-DAKELRDYSILLYHCGLYEQSLQYLKFYQ 355 (357)
Q Consensus 307 r~~d~~~AL~a~Erlll-----L~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yl 355 (357)
..|+++.|+...+..+. -.| .+.-+...|.++++.|.++.|...++.-+
T Consensus 234 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 288 (378)
T 3q15_A 234 RSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGL 288 (378)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 56799999999999888 556 35667889999999999999998887654
No 169
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=59.17 E-value=11 Score=35.47 Aligned_cols=49 Identities=10% Similarity=-0.047 Sum_probs=37.3
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQ 355 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yl 355 (357)
..++++.|..+.+..+.+.| ++.-+.-+|.+|.+.|.+..|+..++.-+
T Consensus 225 ~~~~~~~a~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al 274 (472)
T 4g1t_A 225 EGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKAL 274 (472)
T ss_dssp -----CHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHcCchHHHHHHHHHHH
Confidence 34578889999999999998 57778889999999999999988877654
No 170
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=59.14 E-value=17 Score=32.83 Aligned_cols=22 Identities=9% Similarity=-0.073 Sum_probs=19.1
Q ss_pred cCcCCHHHHHHHHHHHhccCCCh
Q 018358 306 VRFGDMRCALAACERLILLESDA 328 (357)
Q Consensus 306 lr~~d~~~AL~a~ErlllL~Pdp 328 (357)
+..|+++.|+.+.++.+ +.|+.
T Consensus 206 ~~~g~~~~A~~~~~~al-~~p~~ 227 (307)
T 2ifu_A 206 LHRADYVAAQKCVRESY-SIPGF 227 (307)
T ss_dssp HHTTCHHHHHHHHHHHT-TSTTS
T ss_pred HHcCCHHHHHHHHHHHh-CCCCC
Confidence 35689999999999999 99953
No 171
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=58.90 E-value=23 Score=32.48 Aligned_cols=49 Identities=12% Similarity=0.063 Sum_probs=39.3
Q ss_pred CcCCHHHHHHHHHHHhcc-----C-C-ChhHHHHHhHHHHHcCChHHHHHHHHHHh
Q 018358 307 RFGDMRCALAACERLILL-----E-S-DAKELRDYSILLYHCGLYEQSLQYLKFYQ 355 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL-----~-P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yl 355 (357)
..|+++.|+...+..+.+ + | .+.-+...|.++.++|.+..|...++.-+
T Consensus 236 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 291 (383)
T 3ulq_A 236 SQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGM 291 (383)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 577999999999988884 4 4 34567889999999999999988877644
No 172
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=58.18 E-value=16 Score=34.81 Aligned_cols=48 Identities=8% Similarity=0.123 Sum_probs=41.7
Q ss_pred CCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCC-hHHHHHHHHHHhh
Q 018358 309 GDMRCALAACERLILLES-DAKELRDYSILLYHCGL-YEQSLQYLKFYQA 356 (357)
Q Consensus 309 ~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~-~~~A~~dL~~yle 356 (357)
.+++.++.++++++.++| +...|--||.++.++|. ++++++..+..++
T Consensus 124 ~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~ 173 (331)
T 3dss_A 124 PNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLIT 173 (331)
T ss_dssp CCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHH
Confidence 369999999999999999 67889999999999999 5888887776654
No 173
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=58.09 E-value=24 Score=28.46 Aligned_cols=49 Identities=18% Similarity=0.146 Sum_probs=40.9
Q ss_pred CcCCHHHHHHHHHHHhccCC---ChhH----HHHHhHHHHHcCChHHHHHHHHHHh
Q 018358 307 RFGDMRCALAACERLILLES---DAKE----LRDYSILLYHCGLYEQSLQYLKFYQ 355 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P---dp~e----~RDrGlLl~~lg~~~~A~~dL~~yl 355 (357)
..|+++.|+...+..+.+.+ ++.. +...|.++.+.|++.+|...++.-+
T Consensus 119 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 174 (203)
T 3gw4_A 119 HFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRAR 174 (203)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHH
Confidence 67899999999999999975 3322 4789999999999999999887654
No 174
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=58.00 E-value=11 Score=36.90 Aligned_cols=50 Identities=12% Similarity=-0.078 Sum_probs=40.6
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
..|+.+.|..+.|+.+...| ++.-+..+|-++.+.|.+..|..-++..++
T Consensus 403 ~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~~g~~~~Ar~~~~~al~ 453 (530)
T 2ooe_A 403 CSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLT 453 (530)
T ss_dssp HTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHH
T ss_pred HcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHhCCCHhhHHHHHHHHHh
Confidence 36788888888888888888 577788888888888888888888877654
No 175
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=57.98 E-value=17 Score=32.82 Aligned_cols=49 Identities=16% Similarity=0.093 Sum_probs=37.3
Q ss_pred CcCCHHHHHHHHHHHhccC------C-ChhHHHHHhHHHHHcCChHHHHHHHHHHh
Q 018358 307 RFGDMRCALAACERLILLE------S-DAKELRDYSILLYHCGLYEQSLQYLKFYQ 355 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~------P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yl 355 (357)
..|+++.|+...++.+.+. | ...-+..+|.++...|.+++|+..++.-+
T Consensus 59 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 114 (406)
T 3sf4_A 59 YLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHL 114 (406)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4568888988888887773 2 13456888999999999999988776544
No 176
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=57.59 E-value=23 Score=31.45 Aligned_cols=48 Identities=8% Similarity=-0.137 Sum_probs=38.7
Q ss_pred cCCHHHHHHHHHHHhccCC-C------hhHHHHHhHHHHHcC-ChHHHHHHHHHHh
Q 018358 308 FGDMRCALAACERLILLES-D------AKELRDYSILLYHCG-LYEQSLQYLKFYQ 355 (357)
Q Consensus 308 ~~d~~~AL~a~ErlllL~P-d------p~e~RDrGlLl~~lg-~~~~A~~dL~~yl 355 (357)
.|+++.|+...+..+.+.+ . ..-+...|.++.++| .++.|...++.-+
T Consensus 209 ~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al 264 (293)
T 3u3w_A 209 DSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKAS 264 (293)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHH
Confidence 4599999999999998875 2 345689999999999 5699998876543
No 177
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=57.29 E-value=32 Score=30.49 Aligned_cols=43 Identities=9% Similarity=0.000 Sum_probs=25.6
Q ss_pred CcCCHHHHHHHHHHHhccCCC---hh---H-HHHHhHHHHHcCChHHHHH
Q 018358 307 RFGDMRCALAACERLILLESD---AK---E-LRDYSILLYHCGLYEQSLQ 349 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~Pd---p~---e-~RDrGlLl~~lg~~~~A~~ 349 (357)
..|+++.|+...+..+.+.++ .. . ..-.|.+|..+|.++.|+.
T Consensus 208 ~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~ 257 (293)
T 2qfc_A 208 LDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIE 257 (293)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcHHHHH
Confidence 566677777777766666541 21 1 2556666666666666653
No 178
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=57.10 E-value=19 Score=33.10 Aligned_cols=49 Identities=14% Similarity=0.233 Sum_probs=40.2
Q ss_pred cCCHHHHHHHHHHHhccCC-Ch------hHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 308 FGDMRCALAACERLILLES-DA------KELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 308 ~~d~~~AL~a~ErlllL~P-dp------~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
.|+++.|+...+..+.+.+ .+ .-+...|.+|.+.|+++.|+..++.-++
T Consensus 197 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~ 252 (383)
T 3ulq_A 197 LKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIA 252 (383)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 3499999999999998875 22 3568899999999999999999876553
No 179
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=56.64 E-value=18 Score=34.76 Aligned_cols=47 Identities=9% Similarity=0.007 Sum_probs=34.9
Q ss_pred CHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHc-C-ChHHHHHHHHHHhh
Q 018358 310 DMRCALAACERLILLES-DAKELRDYSILLYHC-G-LYEQSLQYLKFYQA 356 (357)
Q Consensus 310 d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~l-g-~~~~A~~dL~~yle 356 (357)
+++.+|..++.+|..+| +...|--||.++.++ + .+.++++..+..++
T Consensus 104 ~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~ 153 (349)
T 3q7a_A 104 SLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLL 153 (349)
T ss_dssp CHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTS
T ss_pred hHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Confidence 58888888888888888 566677888888887 7 77777766655443
No 180
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=53.98 E-value=22 Score=33.34 Aligned_cols=49 Identities=18% Similarity=0.200 Sum_probs=38.8
Q ss_pred CcCCHHHHHHHHHHHhccC---------CC-hhHHHHHhHHHHHcCChHHHHHHHHHHh
Q 018358 307 RFGDMRCALAACERLILLE---------SD-AKELRDYSILLYHCGLYEQSLQYLKFYQ 355 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~---------Pd-p~e~RDrGlLl~~lg~~~~A~~dL~~yl 355 (357)
..|+++.|+.+.+..+.+. |+ ..-+-.+|.+|+++|.+.+|..+++.-+
T Consensus 63 ~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~ 121 (472)
T 4g1t_A 63 LKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVK 121 (472)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHH
Confidence 4689999999999888762 32 2345789999999999999998876543
No 181
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=52.19 E-value=23 Score=31.41 Aligned_cols=14 Identities=14% Similarity=0.059 Sum_probs=8.7
Q ss_pred HHHHHHHHHhcccc
Q 018358 244 EEILRNLKNAFWPF 257 (357)
Q Consensus 244 ~RmL~NLK~~y~~~ 257 (357)
...+.|+-.+|...
T Consensus 196 ~~~~~nlg~~y~~~ 209 (293)
T 2qfc_A 196 VKVRYNHAKALYLD 209 (293)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHhHHHHHHHH
Confidence 36667777777543
No 182
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=51.84 E-value=31 Score=28.41 Aligned_cols=48 Identities=25% Similarity=0.346 Sum_probs=32.8
Q ss_pred cCCHHHHHHHHHHHhccCCChhHHHH----HhHHHHHcCChHHHHHHHHHHhh
Q 018358 308 FGDMRCALAACERLILLESDAKELRD----YSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 308 ~~d~~~AL~a~ErlllL~Pdp~e~RD----rGlLl~~lg~~~~A~~dL~~yle 356 (357)
+.|.++++...+-++.-. +|...|| .|+-+|++|.|..|+..++.+++
T Consensus 51 ~~d~~~GI~lLe~l~~~~-~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~ 102 (126)
T 1nzn_A 51 NDDIRKGIVLLEELLPKG-SKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQ 102 (126)
T ss_dssp HHHHHHHHHHHHHHTTTS-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcC-CcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 346666777777666543 2434444 68888888888888888887764
No 183
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=51.73 E-value=31 Score=29.75 Aligned_cols=48 Identities=15% Similarity=0.054 Sum_probs=39.0
Q ss_pred cCCHHHHHHHHHHHhccCCChhHHHHHhHHHHH----cCChHHHHHHHHHHhh
Q 018358 308 FGDMRCALAACERLILLESDAKELRDYSILLYH----CGLYEQSLQYLKFYQA 356 (357)
Q Consensus 308 ~~d~~~AL~a~ErlllL~Pdp~e~RDrGlLl~~----lg~~~~A~~dL~~yle 356 (357)
.++++.|+...++.+.+. ++.-+...|.+|.+ .+.+..|+..++.-++
T Consensus 55 ~~~~~~A~~~~~~a~~~~-~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~ 106 (273)
T 1ouv_A 55 EKNLKKAASFYAKACDLN-YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACD 106 (273)
T ss_dssp CCCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCC-CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHH
Confidence 788888888888888775 67777888888888 8888888888776554
No 184
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=51.65 E-value=33 Score=29.54 Aligned_cols=48 Identities=10% Similarity=0.034 Sum_probs=42.9
Q ss_pred cCCHHHHHHHHHHHhccCCChhHHHHHhHHHHH----cCChHHHHHHHHHHhh
Q 018358 308 FGDMRCALAACERLILLESDAKELRDYSILLYH----CGLYEQSLQYLKFYQA 356 (357)
Q Consensus 308 ~~d~~~AL~a~ErlllL~Pdp~e~RDrGlLl~~----lg~~~~A~~dL~~yle 356 (357)
.++++.|+...++.+.+. ++.-+...|.+|.+ .|+++.|+..++.-++
T Consensus 91 ~~~~~~A~~~~~~a~~~~-~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~ 142 (273)
T 1ouv_A 91 SQNTNKALQYYSKACDLK-YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACD 142 (273)
T ss_dssp CCCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHcC-CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHh
Confidence 899999999999998875 77888999999999 9999999999887554
No 185
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=51.12 E-value=27 Score=30.95 Aligned_cols=47 Identities=19% Similarity=0.183 Sum_probs=36.3
Q ss_pred CCHHHHHHHHHHHhccC----CC----hhHHHHHhHHHHHcCChHHHHHHHHHHh
Q 018358 309 GDMRCALAACERLILLE----SD----AKELRDYSILLYHCGLYEQSLQYLKFYQ 355 (357)
Q Consensus 309 ~d~~~AL~a~ErlllL~----Pd----p~e~RDrGlLl~~lg~~~~A~~dL~~yl 355 (357)
|+++.|+...+..+.+. .+ ..-+...|.+|+++|.|++|+..++.-+
T Consensus 169 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al 223 (293)
T 3u3w_A 169 GYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAI 223 (293)
T ss_dssp TCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 48888999888888421 12 2356899999999999999999877544
No 186
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=50.71 E-value=20 Score=34.49 Aligned_cols=50 Identities=12% Similarity=0.106 Sum_probs=44.0
Q ss_pred cCcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHHh
Q 018358 306 VRFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQ 355 (357)
Q Consensus 306 lr~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~yl 355 (357)
+..|+++.|+..+++++..+| +-..++..=.+|+++|+..+|++-++.|-
T Consensus 182 l~~g~~~~a~~~l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r 232 (388)
T 2ff4_A 182 IACGRASAVIAELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVK 232 (388)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 467799999999999999999 77778888889999999999998887764
No 187
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=47.47 E-value=24 Score=35.78 Aligned_cols=46 Identities=11% Similarity=0.114 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcC--ChHHHHHHHHHHhh
Q 018358 311 MRCALAACERLILLES-DAKELRDYSILLYHCG--LYEQSLQYLKFYQA 356 (357)
Q Consensus 311 ~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg--~~~~A~~dL~~yle 356 (357)
++.|+.+++.++..+| +...|--||.++.++| .|++|++..+..++
T Consensus 89 ~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~ 137 (567)
T 1dce_A 89 VKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLE 137 (567)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHh
Confidence 9999999999999999 6788899999999999 66999998887765
No 188
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=47.10 E-value=22 Score=32.29 Aligned_cols=48 Identities=15% Similarity=0.055 Sum_probs=30.1
Q ss_pred CcCCHHHHHHHHHHHhccCC---------ChhHHHHHhHHHHHcCChHHHHHHHHHH
Q 018358 307 RFGDMRCALAACERLILLES---------DAKELRDYSILLYHCGLYEQSLQYLKFY 354 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P---------dp~e~RDrGlLl~~lg~~~~A~~dL~~y 354 (357)
..|+++.|+...++.+.+.+ ...-..-.|.+++..|++++|...++.-
T Consensus 105 ~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 161 (373)
T 1hz4_A 105 AQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSG 161 (373)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 45677777777777666542 1123455777777777777777666543
No 189
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=45.44 E-value=26 Score=37.29 Aligned_cols=48 Identities=17% Similarity=0.094 Sum_probs=43.6
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChHHHHHHHHHH
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFY 354 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~y 354 (357)
..|+++.||.++.+.+.+.| +-.-|-=.+.+|.++|+|+.|+--|..|
T Consensus 349 ~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 349 NRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred ccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 57899999999999999999 6788999999999999999999877654
No 190
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=43.76 E-value=36 Score=31.63 Aligned_cols=49 Identities=8% Similarity=-0.097 Sum_probs=41.0
Q ss_pred CcCCHHHHHHHHHHHhccC--CC--hhHHHHHhHHHHHcCChHHHHHHHHHHh
Q 018358 307 RFGDMRCALAACERLILLE--SD--AKELRDYSILLYHCGLYEQSLQYLKFYQ 355 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~--Pd--p~e~RDrGlLl~~lg~~~~A~~dL~~yl 355 (357)
+.|+++.|+...++.+.-. |. +.-+--+|+++.++|+.++|..-|+.-+
T Consensus 183 ~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~ 235 (282)
T 4f3v_A 183 NLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQ 235 (282)
T ss_dssp HTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 5779999999999998655 52 3467899999999999999999987654
No 191
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=41.76 E-value=39 Score=32.41 Aligned_cols=36 Identities=11% Similarity=0.047 Sum_probs=25.7
Q ss_pred CHHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCChH
Q 018358 310 DMRCALAACERLILLES-DAKELRDYSILLYHCGLYE 345 (357)
Q Consensus 310 d~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~~~ 345 (357)
+++.+|.+++.++.++| +..-|--|+.++.++|.++
T Consensus 140 ~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~ 176 (349)
T 3q7a_A 140 DPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLG 176 (349)
T ss_dssp CCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTT
T ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccc
Confidence 56777777777777777 5566777777777777655
No 192
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=40.07 E-value=52 Score=29.72 Aligned_cols=49 Identities=14% Similarity=0.104 Sum_probs=34.4
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhH------HHHHhHHHHHcCChHHHHHHHHHHh
Q 018358 307 RFGDMRCALAACERLILLES-DAKE------LRDYSILLYHCGLYEQSLQYLKFYQ 355 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e------~RDrGlLl~~lg~~~~A~~dL~~yl 355 (357)
..|+++.|+...++.+.+.| .... +...|.++...|++.+|...++.-+
T Consensus 65 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al 120 (373)
T 1hz4_A 65 CKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAF 120 (373)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 56777788888887777777 3333 3457777777888888877776544
No 193
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=39.49 E-value=46 Score=31.53 Aligned_cols=46 Identities=11% Similarity=0.116 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHhccCC-ChhHHHHHhHHHHHcCC--hHHHHHHHHHHhh
Q 018358 311 MRCALAACERLILLES-DAKELRDYSILLYHCGL--YEQSLQYLKFYQA 356 (357)
Q Consensus 311 ~~~AL~a~ErlllL~P-dp~e~RDrGlLl~~lg~--~~~A~~dL~~yle 356 (357)
++.+|.+++.++..+| ++.-|--||.++.++|. +.+++..++..++
T Consensus 90 l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~ 138 (331)
T 3dss_A 90 VKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLE 138 (331)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHH
Confidence 7899999999999999 78889999999999994 8888887776654
No 194
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=38.30 E-value=80 Score=26.51 Aligned_cols=47 Identities=11% Similarity=-0.070 Sum_probs=32.8
Q ss_pred cCCHHHHHHHHHHHhccCCChhHHHHHhHHHHHc-C-----ChHHHHHHHHHH
Q 018358 308 FGDMRCALAACERLILLESDAKELRDYSILLYHC-G-----LYEQSLQYLKFY 354 (357)
Q Consensus 308 ~~d~~~AL~a~ErlllL~Pdp~e~RDrGlLl~~l-g-----~~~~A~~dL~~y 354 (357)
.+|++.|+...++.+.+.+++.-....|.+|.+- | ++..|+..++.=
T Consensus 142 ~~d~~~A~~~~~~A~~~~~~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A 194 (212)
T 3rjv_A 142 PEDDVKASEYFKGSSSLSRTGYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVS 194 (212)
T ss_dssp SCCHHHHHHHHHHHHHTSCTTHHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence 5677777777777777744677777777777665 3 677777766653
No 195
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=33.65 E-value=67 Score=27.12 Aligned_cols=47 Identities=17% Similarity=0.160 Sum_probs=23.9
Q ss_pred CHHHHHHHHHHHhccCC-Ch-hHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 310 DMRCALAACERLILLES-DA-KELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 310 d~~~AL~a~ErlllL~P-dp-~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
|.++++...|-++.-.| +. .=+.-.++-+|++|.|..|+...+.+++
T Consensus 57 di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~ 105 (144)
T 1y8m_A 57 DERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFE 105 (144)
T ss_dssp HHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 45555555555555444 22 1123345555566666666555555543
No 196
>2f4m_A Peptide N-glycanase; glycoproteins, ubiquitin-dependent protein degradation, NUCL excision repair, peptide:N-glycanase; 1.85A {Mus musculus} SCOP: d.3.1.4 PDB: 2f4o_A*
Probab=33.36 E-value=2.2e+02 Score=26.65 Aligned_cols=30 Identities=13% Similarity=0.082 Sum_probs=28.0
Q ss_pred cHHHHHhhccCChHHHHHHHHHHHHHhccc
Q 018358 172 YLHSVLTHRTGSAVMLSLIYSEILKMLRIW 201 (357)
Q Consensus 172 ~L~~VLe~R~GiPIsLaiIylevArRLglp 201 (357)
-...+|++|+|..--.|.+++.++|.+|||
T Consensus 131 ~~~~~l~~r~G~C~d~A~lf~al~Ra~GIp 160 (295)
T 2f4m_A 131 NPEKLLETRCGRCGEWANCFTLCCRALGFE 160 (295)
T ss_dssp CHHHHHHHCEESHHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHcCCEeeHHHHHHHHHHHHHCCCC
Confidence 345899999999999999999999999999
No 197
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=33.05 E-value=59 Score=27.14 Aligned_cols=47 Identities=17% Similarity=0.160 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHHhccCC-Ch-hHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 310 DMRCALAACERLILLES-DA-KELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 310 d~~~AL~a~ErlllL~P-dp-~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
|.++++...+-++.-.| +. .=+.-.++-+|++|.|..|+...+.+++
T Consensus 58 d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~ 106 (134)
T 3o48_A 58 DERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFE 106 (134)
T ss_dssp HHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 55566666666555443 21 1123356666666666666666666553
No 198
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=31.52 E-value=50 Score=30.22 Aligned_cols=49 Identities=10% Similarity=-0.120 Sum_probs=39.9
Q ss_pred CcCCHHHHHHHHHHHhccCC---Ch----hHHHHHhHHHHHcCChHHHHHHHHHHh
Q 018358 307 RFGDMRCALAACERLILLES---DA----KELRDYSILLYHCGLYEQSLQYLKFYQ 355 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P---dp----~e~RDrGlLl~~lg~~~~A~~dL~~yl 355 (357)
..|+++.|+...+..+.+.+ ++ .-....|.+++++|.+..|+..++..+
T Consensus 113 ~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al 168 (378)
T 3q15_A 113 DQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQAL 168 (378)
T ss_dssp HTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHH
Confidence 46799999999999988753 32 335889999999999999998887654
No 199
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=31.36 E-value=82 Score=30.77 Aligned_cols=48 Identities=15% Similarity=0.086 Sum_probs=38.5
Q ss_pred CcCCHHHHHHHHHHHhc-----cCC-ChhH---HHHHhHHHHHcCChHHHHHHHHHH
Q 018358 307 RFGDMRCALAACERLIL-----LES-DAKE---LRDYSILLYHCGLYEQSLQYLKFY 354 (357)
Q Consensus 307 r~~d~~~AL~a~Erlll-----L~P-dp~e---~RDrGlLl~~lg~~~~A~~dL~~y 354 (357)
..|+++.|+...++.|. |.| ||.- +-..|.+|...|+|++|...++.=
T Consensus 310 ~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~a 366 (433)
T 3qww_A 310 HYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKI 366 (433)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHH
Confidence 46789999999998876 556 6633 467899999999999998876653
No 200
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=30.77 E-value=77 Score=23.65 Aligned_cols=49 Identities=18% Similarity=0.057 Sum_probs=37.6
Q ss_pred CcCCHHHHHHHHHHHhccC-------CC-hhHHHHHhHHHHHcCChHHHHHHHHHHh
Q 018358 307 RFGDMRCALAACERLILLE-------SD-AKELRDYSILLYHCGLYEQSLQYLKFYQ 355 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~-------Pd-p~e~RDrGlLl~~lg~~~~A~~dL~~yl 355 (357)
..+++..|..-.+..+... ++ +.-+.-.|..++++|.+..|+..++.-+
T Consensus 17 ~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al 73 (104)
T 2v5f_A 17 TEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLL 73 (104)
T ss_dssp HTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 4679999998888777754 12 3445789999999999999988776543
No 201
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=29.05 E-value=72 Score=29.25 Aligned_cols=48 Identities=10% Similarity=0.066 Sum_probs=39.3
Q ss_pred CcCCHHHHHHHHHHHhccCCChh------------------HHHHHhHHHHHcCChHHHHHHHHHH
Q 018358 307 RFGDMRCALAACERLILLESDAK------------------ELRDYSILLYHCGLYEQSLQYLKFY 354 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~Pdp~------------------e~RDrGlLl~~lg~~~~A~~dL~~y 354 (357)
..|+++.|+.....++...|... .+-..|.+|...|.|++|.+.++.-
T Consensus 16 ~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~ 81 (434)
T 4b4t_Q 16 NEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHS 81 (434)
T ss_dssp HHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred HCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 45799999999999999988321 2567899999999999998877643
No 202
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=27.84 E-value=98 Score=30.03 Aligned_cols=48 Identities=23% Similarity=0.165 Sum_probs=38.7
Q ss_pred CcCCHHHHHHHHHHHhc-----cCC-Chh---HHHHHhHHHHHcCChHHHHHHHHHH
Q 018358 307 RFGDMRCALAACERLIL-----LES-DAK---ELRDYSILLYHCGLYEQSLQYLKFY 354 (357)
Q Consensus 307 r~~d~~~AL~a~Erlll-----L~P-dp~---e~RDrGlLl~~lg~~~~A~~dL~~y 354 (357)
..|+++.|+..+++.|. |.| ||. -+-..|.+|...|+|.+|....+.-
T Consensus 299 ~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~ 355 (429)
T 3qwp_A 299 AHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRT 355 (429)
T ss_dssp HTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred hhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHH
Confidence 57899999999999985 446 663 3477899999999999998876643
No 203
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=27.11 E-value=65 Score=30.46 Aligned_cols=49 Identities=20% Similarity=-0.039 Sum_probs=42.6
Q ss_pred cCcCCHHHHHHHHHHHhccCC-C-hhHHHHHhHHHHH-cCChHHHHHHHHHH
Q 018358 306 VRFGDMRCALAACERLILLES-D-AKELRDYSILLYH-CGLYEQSLQYLKFY 354 (357)
Q Consensus 306 lr~~d~~~AL~a~ErlllL~P-d-p~e~RDrGlLl~~-lg~~~~A~~dL~~y 354 (357)
+.+|+.++|-...||.|.|+| . +.-.-.+|--|++ .|++.+|.+.|+.=
T Consensus 215 ~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~a~~~L~kA 266 (301)
T 3u64_A 215 SFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRAGFDEALDRA 266 (301)
T ss_dssp TTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 458999999999999999999 4 7888899998877 49999999988753
No 204
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=26.78 E-value=1.8e+02 Score=22.72 Aligned_cols=48 Identities=15% Similarity=-0.009 Sum_probs=40.8
Q ss_pred cCCHHHHHHHHHHHhccCCChhHHHHHhHHHHH----cCChHHHHHHHHHHhh
Q 018358 308 FGDMRCALAACERLILLESDAKELRDYSILLYH----CGLYEQSLQYLKFYQA 356 (357)
Q Consensus 308 ~~d~~~AL~a~ErlllL~Pdp~e~RDrGlLl~~----lg~~~~A~~dL~~yle 356 (357)
.+|+++|+...++.... .++.-....|.+|.+ .+++..|+..++.=.+
T Consensus 74 ~~d~~~A~~~~~~Aa~~-g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~ 125 (138)
T 1klx_A 74 KKDLRKAAQYYSKACGL-NDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACR 125 (138)
T ss_dssp CCCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHcC-CCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHH
Confidence 67999999999998876 567778899999999 8999999998876443
No 205
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=25.50 E-value=1.3e+02 Score=29.97 Aligned_cols=49 Identities=16% Similarity=0.161 Sum_probs=39.0
Q ss_pred CcCCHHHHHHHHHHHhc-----cCC-Ch---hHHHHHhHHHHHcCChHHHHHHHHHHh
Q 018358 307 RFGDMRCALAACERLIL-----LES-DA---KELRDYSILLYHCGLYEQSLQYLKFYQ 355 (357)
Q Consensus 307 r~~d~~~AL~a~Erlll-----L~P-dp---~e~RDrGlLl~~lg~~~~A~~dL~~yl 355 (357)
..|+++.|+...++.|. |.| || .-+-..|.+|...|+|++|...++.-+
T Consensus 321 ~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL 378 (490)
T 3n71_A 321 SEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMV 378 (490)
T ss_dssp TTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 78999999998888775 456 56 335789999999999999988766533
No 206
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=24.31 E-value=1.1e+02 Score=22.86 Aligned_cols=29 Identities=21% Similarity=0.342 Sum_probs=23.7
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChhHHHHHh
Q 018358 307 RFGDMRCALAACERLILLES-DAKELRDYS 335 (357)
Q Consensus 307 r~~d~~~AL~a~ErlllL~P-dp~e~RDrG 335 (357)
+.|+++.|+...++++.+.| ++.-+..++
T Consensus 58 ~~g~~~~A~~~~~~al~l~P~~~~~~~n~~ 87 (104)
T 2v5f_A 58 QQGDLDKALLLTKKLLELDPEHQRANGNLK 87 (104)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHhcCCCCHHHHhhHH
Confidence 45699999999999999999 665556655
No 207
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=23.60 E-value=1.7e+02 Score=27.50 Aligned_cols=49 Identities=14% Similarity=0.091 Sum_probs=41.6
Q ss_pred cCCHHHHHHHHHHHhccCC--Ch-hHHHHHhHHHHHcCChHHHHHHHHHHhh
Q 018358 308 FGDMRCALAACERLILLES--DA-KELRDYSILLYHCGLYEQSLQYLKFYQA 356 (357)
Q Consensus 308 ~~d~~~AL~a~ErlllL~P--dp-~e~RDrGlLl~~lg~~~~A~~dL~~yle 356 (357)
.|+++.||..++..+--.| +. ..+.=...++.+.|+...|.+.|+.+.+
T Consensus 113 ~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~ 164 (310)
T 3mv2_B 113 LGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTN 164 (310)
T ss_dssp HTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 5799999999999988886 43 5567888999999999999999987653
No 208
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=23.41 E-value=79 Score=26.69 Aligned_cols=24 Identities=17% Similarity=0.242 Sum_probs=21.3
Q ss_pred ccCcCCHHHHHHHHHHHhccCCCh
Q 018358 305 SVRFGDMRCALAACERLILLESDA 328 (357)
Q Consensus 305 ~lr~~d~~~AL~a~ErlllL~Pdp 328 (357)
+.+-|++.+|+.++|++|..+|+.
T Consensus 87 ~ykl~~Y~~Ar~y~d~lL~~eP~n 110 (144)
T 1y8m_A 87 CYKLGEYSMAKRYVDTLFEHERNN 110 (144)
T ss_dssp HHTTTCHHHHHHHHHHHHHTCCCC
T ss_pred HHHhhhHHHHHHHHHHHHhcCCCc
Confidence 448899999999999999999953
No 209
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=22.01 E-value=1.7e+02 Score=24.31 Aligned_cols=47 Identities=9% Similarity=-0.064 Sum_probs=29.6
Q ss_pred cCCHHHHHHHHHHHhccCCC---hhHHHHHhHHHHH----cCChHHHHHHHHHH
Q 018358 308 FGDMRCALAACERLILLESD---AKELRDYSILLYH----CGLYEQSLQYLKFY 354 (357)
Q Consensus 308 ~~d~~~AL~a~ErlllL~Pd---p~e~RDrGlLl~~----lg~~~~A~~dL~~y 354 (357)
.+|+++|+...++.+...|. +.-....|.+|.+ .+++..|+..++.=
T Consensus 102 ~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A 155 (212)
T 3rjv_A 102 ATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGS 155 (212)
T ss_dssp SCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHH
Confidence 34666666666666666663 5556666666666 66666666665543
No 210
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=21.47 E-value=93 Score=25.92 Aligned_cols=23 Identities=17% Similarity=0.257 Sum_probs=20.7
Q ss_pred ccCcCCHHHHHHHHHHHhccCCC
Q 018358 305 SVRFGDMRCALAACERLILLESD 327 (357)
Q Consensus 305 ~lr~~d~~~AL~a~ErlllL~Pd 327 (357)
+.+-|++.+|+.++|++|..+|+
T Consensus 88 ~yklgdY~~Ar~y~d~lL~~eP~ 110 (134)
T 3o48_A 88 CYKLGEYSMAKRYVDTLFEHERN 110 (134)
T ss_dssp HHHHTCHHHHHHHHHHHHTTCTT
T ss_pred HHHhhhHHHHHHHHHHHHhhCCC
Confidence 34788999999999999999995
No 211
>1x3z_A Peptide: N-glycanase; hydrolase-hydrolase inhibitor complex; HET: SUC; 2.80A {Saccharomyces cerevisiae} SCOP: d.3.1.4 PDB: 1x3w_A* 3esw_A*
Probab=21.19 E-value=51 Score=31.70 Aligned_cols=34 Identities=24% Similarity=0.231 Sum_probs=31.0
Q ss_pred cccccHHHHHhhccCChHHHHHHHHHHHHHhccc
Q 018358 168 PRSLYLHSVLTHRTGSAVMLSLIYSEILKMLRIW 201 (357)
Q Consensus 168 p~Ns~L~~VLe~R~GiPIsLaiIylevArRLglp 201 (357)
|+..-.-.+|++|+|..--.|.++..++|.+|+|
T Consensus 168 PRYn~~~~ll~tr~G~C~e~A~lF~~llRalGi~ 201 (335)
T 1x3z_A 168 PRYNDPIKLLETRKGRCGEWCNLFTLILKSFGLD 201 (335)
T ss_dssp EEECCHHHHHHHCEECHHHHHHHHHHHHHTTTCC
T ss_pred CCcCCHHHHHHhCCcChHHHHHHHHHHHHHCCCC
Confidence 4455677999999999999999999999999999
No 212
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=20.65 E-value=75 Score=26.08 Aligned_cols=23 Identities=22% Similarity=0.255 Sum_probs=20.7
Q ss_pred ccCcCCHHHHHHHHHHHhccCCC
Q 018358 305 SVRFGDMRCALAACERLILLESD 327 (357)
Q Consensus 305 ~lr~~d~~~AL~a~ErlllL~Pd 327 (357)
+.+-|++.+|+.+++.+|..+|+
T Consensus 84 ~yklg~Y~~A~~~~~~lL~~eP~ 106 (126)
T 1nzn_A 84 NYRLKEYEKALKYVRGLLQTEPQ 106 (126)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHhhhHHHHHHHHHHHHHhCCC
Confidence 34788999999999999999994
Done!