BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018366
(357 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3REO|A Chain A, Monolignol O-Methyltransferase (Momt)
pdb|3REO|B Chain B, Monolignol O-Methyltransferase (Momt)
pdb|3REO|C Chain C, Monolignol O-Methyltransferase (Momt)
pdb|3REO|D Chain D, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|A Chain A, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|B Chain B, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|C Chain C, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|D Chain D, Monolignol O-Methyltransferase (Momt)
Length = 368
Score = 386 bits (992), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/362 (51%), Positives = 256/362 (70%), Gaps = 11/362 (3%)
Query: 5 SEIQLPKQNNKYEEEESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKA----GKLSAPE 60
+EIQ+ ++ +EE+ AMQLA VLPMA +AAI+L V EI+AK+ G +S E
Sbjct: 7 AEIQIIPTHS--SDEEANLFAMQLASAAVLPMALKAAIELDVLEIMAKSVPPSGYISPAE 64
Query: 61 IAAQLQAQNVKAPMMLDRMLRLLVSHRVLECSV---SSG--ERLYGLTPVSKYFVSNKDG 115
IAAQL N +AP+MLDR+LRLL S+ V+ ++ SG ERLYGL PV K+ N+DG
Sbjct: 65 IAAQLPTTNPEAPVMLDRVLRLLASYSVVTYTLRELPSGKVERLYGLAPVCKFLTKNEDG 124
Query: 116 VSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMF 175
VSL F+ L DKV +E W L+DA++EGGIPFN+ +GM+IF+Y + N+ ++K M
Sbjct: 125 VSLAPFLLLATDKVLLEPWFYLKDAILEGGIPFNKAYGMNIFDYHGTDHRINKVFNKGMS 184
Query: 176 NHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAVNFDLPHVVQDAPS 235
++STI M++ILE Y GF+ + +VDVGGG G SMI +KYP I A+NFDLPHV+QDAP+
Sbjct: 185 SNSTITMKKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDLPHVIQDAPA 244
Query: 236 YAGVEHVGGNMFDSVPEGDAILMKWILHCWDDDHCLRILKNCYKAIPDNGKVIVMNSIVP 295
++GVEH+GG+MFD VP+GDAI +KWI H W D+HCL++LKNCY A+PD+GKVIV I+P
Sbjct: 245 FSGVEHLGGDMFDGVPKGDAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILP 304
Query: 296 EIPEVSSSARETSLLDVLLMTRDGGGRERTKKEFTELAIAAGFKHINFASCVCNLYIMEF 355
P+ S + + D L++ + GG+ERT+KEF LA+A+GF+ ASC N Y+MEF
Sbjct: 305 PSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGFRGFKVASCAFNTYVMEF 364
Query: 356 FK 357
K
Sbjct: 365 LK 366
>pdb|1KYW|A Chain A, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYW|C Chain C, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYW|F Chain F, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYZ|A Chain A, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
pdb|1KYZ|C Chain C, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
pdb|1KYZ|E Chain E, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
Length = 365
Score = 384 bits (986), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/365 (51%), Positives = 250/365 (68%), Gaps = 10/365 (2%)
Query: 1 MRSLSEIQLPKQNNKYEEEESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKAG---KLS 57
M S E Q+ + +EE+ AMQLA VLPM ++A++L + EIIAKAG ++S
Sbjct: 1 MGSTGETQITPTH--ISDEEANLFAMQLASASVLPMILKSALELDLLEIIAKAGPGAQIS 58
Query: 58 APEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLECSVSSGE-----RLYGLTPVSKYFVSN 112
EIA+QL N AP+MLDRMLRLL + +L CSV + + RLYGL V+KY V N
Sbjct: 59 PIEIASQLPTTNPDAPVMLDRMLRLLACYIILTCSVRTQQDGKVQRLYGLATVAKYLVKN 118
Query: 113 KDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHK 172
+DGVS+ + DKV MESW L+DAV++GGIPFN+ +GM FEY +P FN+ ++K
Sbjct: 119 EDGVSISALNLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNK 178
Query: 173 AMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAVNFDLPHVVQD 232
M +HSTI M++ILE Y GF+ ++ LVDVGGG G ++ I SKYP IK +NFDLPHV++D
Sbjct: 179 GMSDHSTITMKKILETYTGFEGLKSLVDVGGGTGAVINTIVSKYPTIKGINFDLPHVIED 238
Query: 233 APSYAGVEHVGGNMFDSVPEGDAILMKWILHCWDDDHCLRILKNCYKAIPDNGKVIVMNS 292
APSY GVEHVGG+MF S+P+ DA+ MKWI H W D+HCL+ LKNCY+A+PDNGKVIV
Sbjct: 239 APSYPGVEHVGGDMFVSIPKADAVFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAEC 298
Query: 293 IVPEIPEVSSSARETSLLDVLLMTRDGGGRERTKKEFTELAIAAGFKHINFASCVCNLYI 352
I+P P+ S + + +DV+++ + GG+ERT+KEF +LA AGF+ N YI
Sbjct: 299 ILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTQKEFEDLAKGAGFQGFKVHCNAFNTYI 358
Query: 353 MEFFK 357
MEF K
Sbjct: 359 MEFLK 363
>pdb|3P9C|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Bound To
Sah
pdb|3P9I|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9K|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
Length = 364
Score = 335 bits (860), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 164/348 (47%), Positives = 227/348 (65%), Gaps = 8/348 (2%)
Query: 18 EEESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKAG--KLSAPEIAAQL-QAQNVKAPM 74
+E++ A+QLA VLPM + AI+LG+ EI+ AG L+ E+AA+L A N +AP
Sbjct: 17 DEDACMFALQLASSSVLPMTLKNAIELGLLEILVAAGGKSLTPTEVAAKLPSAANPEAPD 76
Query: 75 MLDRMLRLLVSHRVLECSVSSGE-----RLYGLTPVSKYFVSNKDGVSLGHFMALPLDKV 129
M+DR+LRLL S+ V+ C V G+ R YG PV K+ N+DGVS+ + DKV
Sbjct: 77 MVDRILRLLASYNVVTCLVEEGKDGRLSRSYGAAPVCKFLTPNEDGVSMAALALMNQDKV 136
Query: 130 FMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHY 189
MESW L+DAV++GGIPFN+ +GM FEY +P FN +++ M NHS I +++LE Y
Sbjct: 137 LMESWYYLKDAVLDGGIPFNKAYGMSAFEYHGTDPRFNRVFNEGMKNHSIIITKKLLELY 196
Query: 190 EGFQNVERLVDVGGGFGVTLSMITSKYPQIKAVNFDLPHVVQDAPSYAGVEHVGGNMFDS 249
GF+ + LVDVGGG G T++ I + YP IK VNFDLPHV+ +AP + GV HVGG+MF
Sbjct: 197 HGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDLPHVISEAPQFPGVTHVGGDMFKE 256
Query: 250 VPEGDAILMKWILHCWDDDHCLRILKNCYKAIPDNGKVIVMNSIVPEIPEVSSSARETSL 309
VP GD ILMKWILH W D HC +LKNCY A+P +GKV+++ I+P PE + S++
Sbjct: 257 VPSGDTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFH 316
Query: 310 LDVLLMTRDGGGRERTKKEFTELAIAAGFKHINFASCVCNLYIMEFFK 357
+D++++ + GGRER ++EF LA AGF + N + +EF K
Sbjct: 317 VDMIMLAHNPGGRERYEREFQALARGAGFTGVKSTYIYANAWAIEFTK 364
>pdb|1FP1|D Chain D, Crystal Structure Analysis Of Chalcone O-Methyltransferase
Length = 372
Score = 267 bits (683), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 145/353 (41%), Positives = 211/353 (59%), Gaps = 14/353 (3%)
Query: 18 EEESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKAGK----LSAPEIAAQLQA--QNVK 71
E+ + AM L +V P AAI L +FEIIAKA +S EIA++L A Q+
Sbjct: 21 EDSACLSAMVLTTNLVYPAVLNAAIDLNLFEIIAKATPPGAFMSPSEIASKLPASTQHSD 80
Query: 72 APMMLDRMLRLLVSHRVLECSVSS-----GERLYGLTPVSKYFVSNKDGVSLGHFMALPL 126
P LDRMLRLL S+ VL + + ER+YGL+ V KY V ++ L F
Sbjct: 81 LPNRLDRMLRLLASYSVLTSTTRTIEDGGAERVYGLSMVGKYLVPDESRGYLASFTTFLC 140
Query: 127 DKVFMESWLGLRDAVMEGGIP-FNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERI 185
++ W+ ++AV++ I F VHG+ +E+ + N+ ++K+M + M+R+
Sbjct: 141 YPALLQVWMNFKEAVVDEDIDLFKNVHGVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRM 200
Query: 186 LEHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAVNFDLPHVVQDAPSYAGVEHVGGN 245
LE Y GF+ + LVDVGGG G L +I SKYP IK +NFDLP V+++AP +G+EHVGG+
Sbjct: 201 LEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAPPLSGIEHVGGD 260
Query: 246 MFDSVPEGDAILMKWILHCWDDDHCLRILKNCYKAIPDNGKVIVMNSIVPEIPEVSSSAR 305
MF SVP+GDA+++K + H W D+ C+ L NC+KA+ NGKVI++ I+PE P S ++
Sbjct: 261 MFASVPQGDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESK 320
Query: 306 ETSLLDVLLMTRDGGGRERTKKEFTELAIAAGFKHINFASCVCN-LYIMEFFK 357
S LD L+ GGRERT+K++ +L+ +GF A N L +MEF+K
Sbjct: 321 LVSTLDNLMFIT-VGGRERTEKQYEKLSKLSGFSKFQVACRAFNSLGVMEFYK 372
>pdb|1FPQ|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted
Chalcone O- Methyltransferase
Length = 372
Score = 234 bits (596), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 140/353 (39%), Positives = 202/353 (57%), Gaps = 14/353 (3%)
Query: 18 EEESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKA---GKLSAP-EIAAQLQA--QNVK 71
E+ + A L +V P AAI L +FEIIAKA G +P EIA++L A Q+
Sbjct: 21 EDSACLSAXVLTTNLVYPAVLNAAIDLNLFEIIAKATPPGAFXSPSEIASKLPASTQHSD 80
Query: 72 APMMLDRMLRLLVSHRVLECSVSS-----GERLYGLTPVSKYFVSNKDGVSLGHFMALPL 126
P LDR LRLL S+ VL + + ER+YGL+ V KY V ++ L F
Sbjct: 81 LPNRLDRXLRLLASYSVLTSTTRTIEDGGAERVYGLSXVGKYLVPDESRGYLASFTTFLC 140
Query: 127 DKVFMESWLGLRDAVMEGGIP-FNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERI 185
++ W ++AV++ I F VHG+ +E+ + N+ ++K+ + +R
Sbjct: 141 YPALLQVWXNFKEAVVDEDIDLFKNVHGVTKYEFXGKDKKXNQIFNKSXVDVCATEXKRX 200
Query: 186 LEHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAVNFDLPHVVQDAPSYAGVEHVGGN 245
LE Y GF+ + LVDVGGG G L +I SKYP IK +NFDLP V+++AP +G+EHVGG+
Sbjct: 201 LEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAPPLSGIEHVGGD 260
Query: 246 MFDSVPEGDAILMKWILHCWDDDHCLRILKNCYKAIPDNGKVIVMNSIVPEIPEVSSSAR 305
F SVP+GDA ++K + H W D+ C+ L NC+KA+ NGKVI++ I+PE P S ++
Sbjct: 261 XFASVPQGDAXILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESK 320
Query: 306 ETSLLDVLLMTRDGGGRERTKKEFTELAIAAGFKHINFASCVCN-LYIMEFFK 357
S LD L GGRERT+K++ +L+ +GF A N L + EF+K
Sbjct: 321 LVSTLDNLXFIT-VGGRERTEKQYEKLSKLSGFSKFQVACRAFNSLGVXEFYK 372
>pdb|1FP2|A Chain A, Crystal Structure Analysis Of Isoflavone
O-Methyltransferase
Length = 352
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 171/326 (52%), Gaps = 10/326 (3%)
Query: 36 MATQAAIQLGVFEIIAKAGK-LSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLECSVS 94
M+ + A+++ + II GK +S + + LQ + K + R++R L + E ++
Sbjct: 31 MSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGN-VRRLMRYLAHNGFFEI-IT 88
Query: 95 SGERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIP-FNRVHG 153
E Y LT S+ V D + L + LD S+ L+ + E + F G
Sbjct: 89 KEEESYALTVASELLVRGSD-LCLAPMVECVLDPTLSGSYHELKKWIYEEDLTLFGVTLG 147
Query: 154 MHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMIT 213
+++ NP +N +++ AM + S + + + F +E +VDVGGG G T +I
Sbjct: 148 SGFWDFLDKNPEYNTSFNDAMASDSKLINLALRDCDFVFDGLESIVDVGGGTGTTAKIIC 207
Query: 214 SKYPQIKAVNFDLPHVVQDAPSYAGVEHVGGNMFDSVPEGDAILMKWILHCWDDDHCLRI 273
+P++K + FD P VV++ + +VGG+MF S+P DA+L+K+ILH W D CLRI
Sbjct: 208 ETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFTSIPNADAVLLKYILHNWTDKDCLRI 267
Query: 274 LKNCYKAIPDN---GKVIVMNSIVPEIPEVSSSARETSLLDVLLMTRDGGGRERTKKEFT 330
LK C +A+ ++ GKV +++ ++ + + + + L+DV + + G+ER ++E+
Sbjct: 268 LKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLN--GKERNEEEWK 325
Query: 331 ELAIAAGFKHINFASCVCNLYIMEFF 356
+L I AGF+H + L ++E +
Sbjct: 326 KLFIEAGFQHYKISPLTGFLSLIEIY 351
>pdb|1FPX|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted
Isoflavone O-Methyltransferase
Length = 352
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 162/321 (50%), Gaps = 10/321 (3%)
Query: 41 AIQLGVFEIIAKAGK-LSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLECSVSSGERL 99
A++ + II GK +S + + LQ + K + R+ R L + E ++ E
Sbjct: 36 AVEXNIPNIIQNHGKPISLSNLVSILQVPSSKIGNV-RRLXRYLAHNGFFEI-ITKEEES 93
Query: 100 YGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIP-FNRVHGMHIFE 158
Y LT S+ V D + L + LD S+ L+ + E + F G ++
Sbjct: 94 YALTVASELLVRGSD-LCLAPXVECVLDPTLSGSYHELKKWIYEEDLTLFGVTLGSGFWD 152
Query: 159 YASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITSKYPQ 218
+ NP +N +++ A + S + + + F +E +VDVGGG G T +I +P+
Sbjct: 153 FLDKNPEYNTSFNDAXASDSKLINLALRDCDFVFDGLESIVDVGGGTGTTAKIICETFPK 212
Query: 219 IKAVNFDLPHVVQDAPSYAGVEHVGGNMFDSVPEGDAILMKWILHCWDDDHCLRILKNCY 278
+K + FD P VV++ + +VGG+ F S+P DA+L+K+ILH W D CLRILK C
Sbjct: 213 LKCIVFDRPQVVENLSGSNNLTYVGGDXFTSIPNADAVLLKYILHNWTDKDCLRILKKCK 272
Query: 279 KAIPDN---GKVIVMNSIVPEIPEVSSSARETSLLDVLLMTRDGGGRERTKKEFTELAIA 335
+A+ ++ GKV +++ ++ + + + + L DV + G+ER ++E+ +L I
Sbjct: 273 EAVTNDGKRGKVTIIDXVIDKKKDENQVTQIKLLXDVNXACLN--GKERNEEEWKKLFIE 330
Query: 336 AGFKHINFASCVCNLYIMEFF 356
AGF+H + L ++E +
Sbjct: 331 AGFQHYKISPLTGFLSLIEIY 351
>pdb|2QYO|A Chain A, Crystal Structure Of Isoflavone O-Methyltransferase
Homolog In Complex With Biochanin A And Sah
pdb|2QYO|B Chain B, Crystal Structure Of Isoflavone O-Methyltransferase
Homolog In Complex With Biochanin A And Sah
Length = 357
Score = 138 bits (348), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 166/313 (53%), Gaps = 13/313 (4%)
Query: 36 MATQAAIQLGVFEIIAKAGK-LSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLEC--- 91
M+ + +I++ + II GK ++ + + LQ + K + R++R L + E
Sbjct: 31 MSLKWSIEMNIPNIIHNHGKPITLSNLVSILQIPSTKVDN-VQRLMRYLAHNGFFEIITN 89
Query: 92 -SVSSGERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNR 150
+ + E Y LT S+ V + + L + LD S+ L+ V E +
Sbjct: 90 QELENEEEAYALTVASELLVKGTE-LCLAPMVECVLDPTLSTSFHNLKKWVYEEDLTLFA 148
Query: 151 VH-GMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTL 209
V+ G ++E+ + NP +N Y+ A+ + S + + + F+ +E +VDVGGG G T
Sbjct: 149 VNLGCDLWEFLNKNPEYNTLYNDALASDSKMINLAMKDCNLVFEGLESIVDVGGGNGTTG 208
Query: 210 SMITSKYPQIKAVNFDLPHVVQDAPSYAGVEHVGGNMFDSVPEGDAILMKWILHCWDDDH 269
+I +P++ V FD P VV++ + +VGG+MF SVP+ DA+L+K +LH W D
Sbjct: 209 KIICETFPKLTCVVFDRPKVVENLCGSNNLTYVGGDMFISVPKADAVLLKAVLHDWTDKD 268
Query: 270 CLRILKNCYKAIPDN---GKVIVMNSIVPEIPEVSSSARETSLLDVLLMTRDGGGRERTK 326
C++ILK C +A+ + GKVIV++ ++ E + + + L++V + + G+ER +
Sbjct: 269 CIKILKKCKEAVTSDGKRGKVIVIDMVINEKKDENQLTQIKLLMNVTISCVN--GKERNE 326
Query: 327 KEFTELAIAAGFK 339
+E+ +L I AGF+
Sbjct: 327 EEWKKLFIEAGFQ 339
>pdb|1ZG3|A Chain A, Crystal Structure Of The Isoflavanone
4'-O-Methyltransferase Complexed With Sah And
2,7,4'-Trihydroxyisoflavanone
Length = 358
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 167/347 (48%), Gaps = 35/347 (10%)
Query: 17 EEEESYSHAMQLAMGV---VLPMATQAAIQLGVFEIIAKAGK-LSAPEIAAQLQAQNVKA 72
EE E Y + L V V MA ++A++LG+ + I GK ++ E+A+ L+ K
Sbjct: 3 EESELYHAQIHLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKV 62
Query: 73 PMMLDRMLRLLVSHRVLECSVSSGERL-------YGLTPVSKYFVSNKDGVSLGHFMALP 125
+ L R LRLL + ++ G+ Y LTP SK +S K L +
Sbjct: 63 NI-LHRFLRLLTHNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGK-PTCLSSIVKGA 120
Query: 126 LDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFN------ETYHKAMFNHST 179
L ++ W + FN +FE A+G ++ E+ +MF +
Sbjct: 121 LHPSSLDMWSSSKKW-------FNEDKEQTLFECATGESFWDFLNKDSESSTLSMFQDAM 173
Query: 180 IAMERIL-----EHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAVNFDLPHVVQDAP 234
+ R+ E+ F+ +E LVDVGGG G +I +P +K FD P VV +
Sbjct: 174 ASDSRMFKLVLQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLT 233
Query: 235 SYAGVEHVGGNMFDSVPEGDAILMKWILHCWDDDHCLRILKNCYKAIP---DNGKVIVMN 291
+ VGG+MF S+P DA+L+KW+LH W+D+ L+ILKN +AI +GKVI+++
Sbjct: 234 GNENLNFVGGDMFKSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIID 293
Query: 292 SIVPEIPEVSSSARETSLLDVLLMTRDGGGRERTKKEFTELAIAAGF 338
+ E + E L L+M G+ERTK+E+ +L AGF
Sbjct: 294 ISIDETSD-DRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGF 339
>pdb|1ZGA|A Chain A, Crystal Structure Of Isoflavanone 4'-o-methyltransferase
Complexed With (+)-6a-hydroxymaackiain
pdb|1ZHF|A Chain A, Crystal Structure Of Selenomethionine Substituted
Isoflavanone 4'-O- Methyltransferase
Length = 357
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 167/347 (48%), Gaps = 35/347 (10%)
Query: 17 EEEESYSHAMQLAMGV---VLPMATQAAIQLGVFEIIAKAGK-LSAPEIAAQLQAQNVKA 72
EE E Y + L V V MA ++A++LG+ + I GK ++ E+A+ L+ K
Sbjct: 2 EESELYHAQIHLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKV 61
Query: 73 PMMLDRMLRLLVSHRVLECSVSSGERL-------YGLTPVSKYFVSNKDGVSLGHFMALP 125
+ L R LRLL + ++ G+ Y LTP SK +S K L +
Sbjct: 62 NI-LHRFLRLLTHNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGK-PTCLSSIVKGA 119
Query: 126 LDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFN------ETYHKAMFNHST 179
L ++ W + FN +FE A+G ++ E+ +MF +
Sbjct: 120 LHPSSLDMWSSSKKW-------FNEDKEQTLFECATGESFWDFLNKDSESSTLSMFQDAM 172
Query: 180 IAMERIL-----EHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAVNFDLPHVVQDAP 234
+ R+ E+ F+ +E LVDVGGG G +I +P +K FD P VV +
Sbjct: 173 ASDSRMFKLVLQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLT 232
Query: 235 SYAGVEHVGGNMFDSVPEGDAILMKWILHCWDDDHCLRILKNCYKAIP---DNGKVIVMN 291
+ VGG+MF S+P DA+L+KW+LH W+D+ L+ILKN +AI +GKVI+++
Sbjct: 233 GNENLNFVGGDMFKSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIID 292
Query: 292 SIVPEIPEVSSSARETSLLDVLLMTRDGGGRERTKKEFTELAIAAGF 338
+ E + E L L+M G+ERTK+E+ +L AGF
Sbjct: 293 ISIDETSD-DRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGF 338
>pdb|1ZGJ|A Chain A, Crystal Structure Of Isoflavanone 4'-O-Methyltransferase
Complexed With (+)-Pisatin
Length = 354
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 162/337 (48%), Gaps = 32/337 (9%)
Query: 24 HAMQLAMGVVLPMATQAAIQLGVFEIIAKAGK-LSAPEIAAQLQAQNVKAPMMLDRMLRL 82
H + V MA ++A++LG+ + I GK ++ E+A+ L+ K + L R LRL
Sbjct: 9 HLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKVNI-LHRFLRL 67
Query: 83 LVSHRVLECSVSSGERL-------YGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWL 135
L + ++ G+ Y LTP SK +S K L + L ++ W
Sbjct: 68 LTHNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGK-PTCLSSIVKGALHPSSLDMWS 126
Query: 136 GLRDAVMEGGIPFNRVHGMHIFEYASGNPGFN------ETYHKAMFNHSTIAMERIL--- 186
+ FN +FE A+G ++ E+ +MF + + R+
Sbjct: 127 SSKKW-------FNEDKEQTLFECATGESFWDFLNKDSESSTLSMFQDAMASDSRMFKLV 179
Query: 187 --EHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAVNFDLPHVVQDAPSYAGVEHVGG 244
E+ F+ +E LVDVGGG G +I +P +K FD P VV + + VGG
Sbjct: 180 LQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGG 239
Query: 245 NMFDSVPEGDAILMKWILHCWDDDHCLRILKNCYKAIP---DNGKVIVMNSIVPEIPEVS 301
+MF S+P DA+L+KW+LH W+D+ L+ILKN +AI +GKVI+++ + E +
Sbjct: 240 DMFKSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSD-D 298
Query: 302 SSARETSLLDVLLMTRDGGGRERTKKEFTELAIAAGF 338
E L L+M G+ERTK+E+ +L AGF
Sbjct: 299 RGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGF 335
>pdb|3LST|A Chain A, Crystal Structure Of Calo1, Methyltransferase In
Calicheamicin Biosynthesis, Sah Bound Form
pdb|3LST|B Chain B, Crystal Structure Of Calo1, Methyltransferase In
Calicheamicin Biosynthesis, Sah Bound Form
Length = 348
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 121/289 (41%), Gaps = 16/289 (5%)
Query: 56 LSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLECSVSSGERLYGLTPVSKYFVSNKDG 115
+ P A+L A L R+LRLL V+ S + + LT S+
Sbjct: 52 VDGPRTPAELAAATGTDADALRRVLRLLAVRDVVRES----DGRFALTDKGAALRSDSPV 107
Query: 116 VSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMF 175
+ + D F + A+ F + G + Y G+ Y++
Sbjct: 108 PARAGILXF-TDTXFWTXSHRVASALGPERPAFADIFGSSLDAYFDGDAEVEALYYEGXE 166
Query: 176 NHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAVNFDLPHVVQ---- 231
S A IL F + DVGGG G L + ++P ++ V D VV
Sbjct: 167 TVSA-AEHLILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVARHRL 225
Query: 232 DAPSYAGV-EHVGGNMFDSVPEGDAILMKWILHCWDDDHCLRILKNCYKAIPDNGKVIVM 290
DAP AG + V G+ VP D ++K ILH W D+ +RIL NC + P +G+V+V+
Sbjct: 226 DAPDVAGRWKVVEGDFLREVPHADVHVLKRILHNWGDEDSVRILTNCRRVXPAHGRVLVI 285
Query: 291 NSIVPEIPEVSSSARETSLLDVLLMTRDGGGRERTKKEFTELAIAAGFK 339
+++VPE + S +E + T G+ERT E L AAG +
Sbjct: 286 DAVVPEGNDAHQS-KEXDFXXLAART----GQERTAAELEPLFTAAGLR 329
>pdb|4A6D|A Chain A, Crystal Structure Of Human N-Acetylserotonin
Methyltransferase (Asmt) In Complex With Sam
pdb|4A6E|A Chain A, Crystal Structure Of Human N-Acetylserotonin
Methyltransferase (Asmt) In Complex With Sam And
N-Acetylserotonin
Length = 353
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 150/337 (44%), Gaps = 21/337 (6%)
Query: 18 EEESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKA-GKLSAPEIAAQLQAQNVKAPMML 76
E+++Y A G ++ AA +LGVF+++A+A G L +AA ++A ++L
Sbjct: 5 EDQAYRLLNDYANGFMVSQVLFAACELGVFDLLAEAPGPLDVAAVAAGVRASAHGTELLL 64
Query: 77 DRMLRLLVSHRVLECSVSSGERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLG 136
D + VS ++L+ G+ Y T +S +++ S + + + W
Sbjct: 65 D----ICVSLKLLKVETRGGKAFYRNTELSSDYLTTVSPTSQCSMLKY-MGRTSYRCWGH 119
Query: 137 LRDAVMEGGIPFNRVHGM---HIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQ 193
L DAV EG + G+ +F + G + +A+ ++ +L ++
Sbjct: 120 LADAVREGRNQYLETFGVPAEELFTAIYRSEGERLQFMQALQEVWSVNGRSVLTAFD-LS 178
Query: 194 NVERLVDVGGGFGVTLSMITSKYPQIKAVNFDLPHVVQDAP---SYAGVEHVG---GNMF 247
+ D+GGG G S YP K FD+P VV A S+ E + G+ F
Sbjct: 179 VFPLMCDLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFF 238
Query: 248 -DSVPEGDAILMKWILHCWDDDHCLRILKNCYKAIPDNGKVIVMNSIVPEIPEVSSSARE 306
D +PE D ++ +LH W D C +L+ Y G ++V+ S++ E +
Sbjct: 239 KDPLPEADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQL 298
Query: 307 TSLLDVLLMTRDGGGRERTKKEFTELAIAAGFKHINF 343
S L++L+ T G+ERT + L +AGF+ F
Sbjct: 299 YS-LNMLVQTE---GQERTPTHYHMLLSSAGFRDFQF 331
>pdb|3GWZ|A Chain A, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|D Chain D, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|C Chain C, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|B Chain B, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GXO|A Chain A, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|D Chain D, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|C Chain C, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|B Chain B, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
Length = 369
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 107/228 (46%), Gaps = 18/228 (7%)
Query: 120 HFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHST 179
F A P +W L +V G F+ +G ++ +P E +++A + S
Sbjct: 132 RFQAAPW---HWRAWEQLTHSVRTGEASFDVANGTSFWQLTHEDPKARELFNRAXGSVSL 188
Query: 180 IAMERILEHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAVNFDLPHVVQDAPSYAG- 238
++ Y+ F VD+GGG G + + +P ++ + P V ++A
Sbjct: 189 TEAGQVAAAYD-FSGAATAVDIGGGRGSLXAAVLDAFPGLRGTLLERPPVAEEARELLTG 247
Query: 239 ------VEHVGGNMFDSVPEG-DAILMKWILHCWDDDHCLRILKNCYKAIPDNGKVIVMN 291
E + G+ F+++P+G D L+K +LH WDDD +RIL+ A + +++V++
Sbjct: 248 RGLADRCEILPGDFFETIPDGADVYLIKHVLHDWDDDDVVRILRRIATAXKPDSRLLVID 307
Query: 292 SIVPEIPEVSSSARETSLLDVLLMTRDGGGRERTKKEFTELAIAAGFK 339
+++ E P S+ + LL ++ GG ER++ EF L +G +
Sbjct: 308 NLIDERPAASTLFVDLLLLVLV------GGAERSESEFAALLEKSGLR 349
>pdb|1QZZ|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adensyl-L-Methionine (Sam)
pdb|1R00|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adensyl-L-Homocystein (Sah)
Length = 374
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 139/318 (43%), Gaps = 24/318 (7%)
Query: 32 VVLPMATQAAIQLGVFEIIAKAGKLSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLEC 91
+V PMA + A L + + + L+ + A L + P L R++R L VLE
Sbjct: 27 LVTPMALRVAATLRLVDHL-----LAGADTLAGLADRTDTHPQALSRLVRHLTVVGVLEG 81
Query: 92 SVSSGERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWL---GLRDAVMEGGIPF 148
G L ++ + DG L L+ + L GL D V G +
Sbjct: 82 GEKQGRPLR----PTRLGMLLADGHPAQQRAWLDLNGAVSHADLAFTGLLDVVRTGRPAY 137
Query: 149 NRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVT 208
+G +E S + +++ M +A E + Y+ + V ++DVGGG G
Sbjct: 138 AGRYGRPFWEDLSADVALADSFDALMSCDEDLAYEAPADAYD-WSAVRHVLDVGGGNGGM 196
Query: 209 LSMITSKYPQIKAVNFDLPHVVQ-------DAPSYAGVEHVGGNMFDSVP-EGDAILMKW 260
L+ I + P ++ +L + DA V G+ F +P D +L+ +
Sbjct: 197 LAAIALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVAEGDFFKPLPVTADVVLLSF 256
Query: 261 ILHCWDDDHCLRILKNCYKAIPDNGKVIVMNSIVPEIPEVSSSARETSLLDVLLMTRDGG 320
+L W D+ L IL+ C +A+ G+++V++ ++ + ++LLD+ ++T G
Sbjct: 257 VLLNWSDEDALTILRGCVRALEPGGRLLVLDRA--DVEGDGADRFFSTLLDLRMLTF-MG 313
Query: 321 GRERTKKEFTELAIAAGF 338
GR RT+ E +LA +AG
Sbjct: 314 GRVRTRDEVVDLAGSAGL 331
>pdb|2IP2|A Chain A, Structure Of The Pyocyanin Biosynthetic Protein Phzm
pdb|2IP2|B Chain B, Structure Of The Pyocyanin Biosynthetic Protein Phzm
Length = 334
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 131/311 (42%), Gaps = 37/311 (11%)
Query: 41 AIQLGVFEIIAKAGKLSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLECSVSSGERLY 100
A +LG+ ++I ++G S +AA + + + + R++RLLV+ + + G Y
Sbjct: 28 ATRLGLADLI-ESGIDSDETLAAAVGSDAER----IHRLMRLLVAFEIFQGDTRDG---Y 79
Query: 101 GLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYA 160
TP S +D M L + F +W +A++ G F G + Y
Sbjct: 80 ANTPTSHLL---RDVEGSFRDMVLFYGEEFHAAWTPACEALLSGTPGFELAFGEDFYSYL 136
Query: 161 SGNPGFNETYHKAMFNHSTIAMERI--LEHYEGFQNVERLVDVGGGFGVTLSMITSKYPQ 218
P + AM S +A I L + G VDVGGG G I P
Sbjct: 137 KRCPDAGRRFLLAM-KASNLAFHEIPRLLDFRG----RSFVDVGGGSGELTKAILQAEPS 191
Query: 219 IKAVNFDLPH---VVQDAPS--YAG--VEHVGGNMFDSVPE-GDAILMKWILHCWDDDHC 270
+ V D V +D S AG V VGG+M VP GD L+ I+ D+
Sbjct: 192 ARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQEVPSNGDIYLLSRIIGDLDEAAS 251
Query: 271 LRILKNCYKAIPDNGKVIVMNSIVPEIPEVSSSARETSLLDVLL---MTRDGGGRERTKK 327
LR+L NC +A+ +G+V+V+ + SA E S + VL + GR RT +
Sbjct: 252 LRLLGNCREAMAGDGRVVVIERTI--------SASEPSPMSVLWDVHLFMACAGRHRTTE 303
Query: 328 EFTELAIAAGF 338
E +L GF
Sbjct: 304 EVVDLLGRGGF 314
>pdb|1TW2|A Chain A, Crystal Structure Of Carminomycin-4-O-Methyltransferase
(Dnrk) In Complex With S-Adenosyl-L-Homocystein (Sah)
And 4-Methoxy-E-Rhodomycin T (M-Et)
pdb|1TW2|B Chain B, Crystal Structure Of Carminomycin-4-O-Methyltransferase
(Dnrk) In Complex With S-Adenosyl-L-Homocystein (Sah)
And 4-Methoxy-E-Rhodomycin T (M-Et)
pdb|1TW3|A Chain A, Crystal Structure Of Carminomycin-4-o-methyltransferase
(dnrk) In Complex With S-adenosyl-l-homocystein (sah)
And 4-methoxy-e-rhodomycin T (m-et)
pdb|1TW3|B Chain B, Crystal Structure Of Carminomycin-4-o-methyltransferase
(dnrk) In Complex With S-adenosyl-l-homocystein (sah)
And 4-methoxy-e-rhodomycin T (m-et)
Length = 360
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 146/315 (46%), Gaps = 27/315 (8%)
Query: 35 PMATQAAIQLGVFE-IIAKAGKLSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLECSV 93
PM + A L + + I+A A + A L A+ P L R++R LV+ +LE
Sbjct: 33 PMVVRTAATLRLVDHILAGARTVKA------LAARTDTRPEALLRLIRHLVAIGLLEED- 85
Query: 94 SSGERLYGLTPVSKYFVSNKDGVSLG-HFMALPLDKVFMESWLGLRDAVMEGGIPFNRVH 152
+ GE + T V + + H + + + + S+ L DA+ G + ++
Sbjct: 86 APGE--FVPTEVGELLADDHPAAQRAWHDLTQAVARADI-SFTRLPDAIRTGRPTYESIY 142
Query: 153 GMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMI 212
G +E +G P ++ + +A + Y+ + NV ++DVGGG G + I
Sbjct: 143 GKPFYEDLAGRPDLRASFDSLLACDQDVAFDAPAAAYD-WTNVRHVLDVGGGKGGFAAAI 201
Query: 213 TSKYPQIKAVNFDLPHVVQDAPSYAG-------VEHVGGNMFDSVP-EGDAILMKWILHC 264
+ P + A ++ V A SY V+ V G+ F+ +P + DAI++ ++L
Sbjct: 202 ARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPRKADAIILSFVLLN 261
Query: 265 WDDDHCLRILKNCYKAIPDNGKVIVMNSIVPEIPEVSSSARETSL-LDVLLMTRDGGGRE 323
W D +RIL C +A+ G++++ ++ E S + + T L L +L+ GG
Sbjct: 262 WPDHDAVRILTRCAEALEPGGRILIHER--DDLHENSFNEQFTELDLRMLVFL---GGAL 316
Query: 324 RTKKEFTELAIAAGF 338
RT++++ LA +AG
Sbjct: 317 RTREKWDGLAASAGL 331
>pdb|1XDS|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adenosyl-L-Methionine (Sam) And
11-Deoxy- Beta-Rhodomycin (Dbra)
pdb|1XDS|B Chain B, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adenosyl-L-Methionine (Sam) And
11-Deoxy- Beta-Rhodomycin (Dbra)
pdb|1XDU|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With Sinefungin (Sfg)
Length = 374
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 100/214 (46%), Gaps = 12/214 (5%)
Query: 133 SWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGF 192
++ GL D V G + +G +E S + +++ +A E + Y+ +
Sbjct: 122 AFTGLLDVVRTGRPAYAGRYGRPFWEDLSADVALADSFDALXSCDEDLAYEAPADAYD-W 180
Query: 193 QNVERLVDVGGGFGVTLSMITSKYPQIKAVNFDLPHVVQ-------DAPSYAGVEHVGGN 245
V ++DVGGG G L+ I + P ++ +L + DA V G+
Sbjct: 181 SAVRHVLDVGGGNGGXLAAIALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVAEGD 240
Query: 246 MFDSVP-EGDAILMKWILHCWDDDHCLRILKNCYKAIPDNGKVIVMNSIVPEIPEVSSSA 304
F +P D +L+ ++L W D+ L IL+ C +A+ G+++V++ ++ +
Sbjct: 241 FFKPLPVTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRA--DVEGDGADR 298
Query: 305 RETSLLDVLLMTRDGGGRERTKKEFTELAIAAGF 338
++LLD+ +T GGR RT+ E +LA +AG
Sbjct: 299 FFSTLLDLRXLTF-XGGRVRTRDEVVDLAGSAGL 331
>pdb|1X19|A Chain A, Crystal Structure Of Bchu Involved In Bacteriochlorophyll
C Biosynthesis
pdb|1X1A|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Methionine
pdb|1X1B|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine
pdb|1X1C|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine And Zn2+
pdb|1X1D|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine And Zn-Bacteriopheophorbide D
Length = 359
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 129/299 (43%), Gaps = 47/299 (15%)
Query: 22 YSHAMQLAM-GVVLPMATQAAIQLGVFEIIAKAGKLSAPEIAAQLQAQNVKAPMMLDRML 80
Y A +L G++ +AAI+L +F +A+ P+ A L A P L+ +L
Sbjct: 31 YHRANELVFKGLIEFSCMKAAIELDLFSHMAEG-----PKDLATLAADTGSVPPRLEMLL 85
Query: 81 RLLVSHRVLECSVSSGERLYGLTPVSKYFVS------NKDGVSLGHFMALPLDKVFMESW 134
L RV+ ++ G+ + LT + Y S N + MA D +M
Sbjct: 86 ETLRQMRVI--NLEDGK--WSLTEFADYMFSPTPKEPNLHQTPVAKAMAFLADDFYM--- 138
Query: 135 LGLRDAV-----MEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHY 189
GL AV +G +P+ V N F E + +++ A++ +LE
Sbjct: 139 -GLSQAVRGQKNFKGQVPYPPVT-------REDNLYFEEIHR----SNAKFAIQLLLEEA 186
Query: 190 EGFQNVERLVDVGGGFGVTLSMITSKYPQIKAVNFDLPHVVQDAPSYAGVEHVGGNMF-- 247
+ V++++DVGGG G + + +P++ + +LP + A + V M
Sbjct: 187 K-LDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNLPGAIDLVNENAAEKGVADRMRGI 245
Query: 248 ------DSVPEGDAILMKWILHCWDDDHCLRILKNCYKAIPDNGKVIVMNSIV--PEIP 298
+S PE DA+L IL+ ++ + K + A+ G++++++ ++ PE P
Sbjct: 246 AVDIYKESYPEADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENP 304
>pdb|3I53|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah)
pdb|3I53|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah)
pdb|3I58|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
2-Hydroxy-7-Methoxy-5-Methyl Naphthoic Acid (Na)
pdb|3I58|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
2-Hydroxy-7-Methoxy-5-Methyl Naphthoic Acid (Na)
pdb|3I5U|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosylmethionine (Sam) And 2-Hydroxy-5-Methyl
Naphthoic Acid (Mna)
pdb|3I5U|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosylmethionine (Sam) And 2-Hydroxy-5-Methyl
Naphthoic Acid (Mna)
pdb|3I64|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
1,4-Dihydroxy-2-Naphthoic Acid (Dhn)
pdb|3I64|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
1,4-Dihydroxy-2-Naphthoic Acid (Dhn)
Length = 332
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 10/113 (8%)
Query: 244 GNMFDSVPEG-DAILMKWILHCWDDDHCLRILKNCYKAIPDNGKVIVMNSIVPEIPEVSS 302
G+ FD +P G ++ +LH WDD + IL+ C +A G V+V+ ++ + E +
Sbjct: 226 GSFFDPLPAGAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGD--EHAG 283
Query: 303 SARETSLLDVLLMTRDGGGRERTKKEFTELAIAAGFKHINFASCVCNLYIMEF 355
+ + +L GG+ER+ E ELA AG + A + + I+E
Sbjct: 284 TGMDLRMLTYF------GGKERSLAELGELAAQAGLA-VRAAHPISYVSIVEM 329
>pdb|3DP7|A Chain A, Crystal Structure Of Sam-Dependent Methyltransferase From
Bacteroides Vulgatus Atcc 8482
pdb|3DP7|B Chain B, Crystal Structure Of Sam-Dependent Methyltransferase From
Bacteroides Vulgatus Atcc 8482
Length = 363
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 122/296 (41%), Gaps = 42/296 (14%)
Query: 20 ESYSHAMQLAMGVVLPMATQAAIQLGVFEIIA-KAGKLSAPEIAAQLQAQNVKAPMMLDR 78
E+ A ++A G V+ ++ ++ G+F++++ K + EI+ + A ++L+
Sbjct: 14 EAQRLAQEIAFGPVVFQVSRLMLKFGIFQLLSGKREGYTLQEISGRTGLTRYAAQVLLEA 73
Query: 79 MLRLLVSHRVLECSVSSGERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLR 138
L + +LE E Y L + +++K F V + L
Sbjct: 74 --SLTIGTILLE------EDRYVLAKAGWFLLNDKMARVNMEFN----HDVNYQGLFHLE 121
Query: 139 DAVMEGGIPFNRVHGMH--IFEYASGNP--------GFNETYHKAMFNHSTIAMERILEH 188
+A++ G +V G I+E S P GF+ Y F A+E + H
Sbjct: 122 EALLNGRPEGLKVFGEWPTIYEGLSQLPEQVQKSWFGFDHFYSDQSFGK---ALEIVFSH 178
Query: 189 YEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAVNFDLPHVVQ----DAPSYAGVEHV-- 242
+ +RL+D+GG G + +++ DLP ++ +G E +
Sbjct: 179 HP-----KRLLDIGGNTGKWATQCVQYNKEVEVTIVDLPQQLEMMRKQTAGLSGSERIHG 233
Query: 243 -GGNMFDS---VPEG-DAILMKWILHCWDDDHCLRILKNCYKAIPDNGKVIVMNSI 293
G N+ D P G DA+ M L C+ ++ + IL ++I + KV +M ++
Sbjct: 234 HGANLLDRDVPFPTGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETL 289
>pdb|2R3S|A Chain A, Crystal Structure Of A Putative O-methyltransferase
(npun_r0239) From Nostoc Punctiforme Pcc 73102 At 2.15 A
Resolution
pdb|2R3S|B Chain B, Crystal Structure Of A Putative O-methyltransferase
(npun_r0239) From Nostoc Punctiforme Pcc 73102 At 2.15 A
Resolution
Length = 335
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 64/318 (20%), Positives = 124/318 (38%), Gaps = 36/318 (11%)
Query: 37 ATQAAIQLGVFEIIAKAGKLSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLECSVSSG 96
A +AA++L VF I++ G S+ +A + Q +R R L + V+ +
Sbjct: 22 AIKAAVELNVFTAISQ-GIESSQSLAQKCQTS--------ERGXRXLCDYLVIIGFXTKQ 72
Query: 97 ERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHI 156
Y LT S F+ + +G + L + L AV++GG + +
Sbjct: 73 AEGYRLTSDSAXFLDRQSKFYVGDAIEFLLSPXITNGFNDLTAAVLKGGTAISSEGTL-- 130
Query: 157 FEYASGNP---GFNETYHKAMFNHSTIAMERILEHYEGFQNVE--RLVDVGGGFGVTLSM 211
+ +P F + N + + + + E+ +E +++D+ G+
Sbjct: 131 ---SPEHPVWVQFAKAXSPXXANPAQLIAQLVNEN-----KIEPLKVLDISASHGLFGIA 182
Query: 212 ITSKYPQIKAVNFDLPHVVQDAPSYAGVEHVG-------GNMF--DSVPEGDAILMKWIL 262
+ P + D V++ A A ++ V G+ F D + D +L+ L
Sbjct: 183 VAQHNPNAEIFGVDWASVLEVAKENARIQGVASRYHTIAGSAFEVDYGNDYDLVLLPNFL 242
Query: 263 HCWDDDHCLRILKNCYKAIPDNGKVIVMNSIVPEIPEVSSSARETSLLDVLLMTRDGGGR 322
H +D C ++L+ A+ GKVIV + +P ++ + + ++ + G
Sbjct: 243 HHFDVATCEQLLRKIKTALAVEGKVIVFD-FIPNSDRITPP--DAAAFSLVXLATTPNGD 299
Query: 323 ERTKKEFTELAIAAGFKH 340
T E+ AGF H
Sbjct: 300 AYTFAEYESXFSNAGFSH 317
>pdb|2EX4|A Chain A, Crystal Structure Of Human Methyltransferase Ad-003 In
Complex With S-adenosyl-l-homocysteine
pdb|2EX4|B Chain B, Crystal Structure Of Human Methyltransferase Ad-003 In
Complex With S-adenosyl-l-homocysteine
Length = 241
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 62/143 (43%), Gaps = 14/143 (9%)
Query: 175 FNHSTIAMERILEHYEGFQNVERLVDVGGGFG-VTLSMITSKYPQIKAVNFDLPHVVQDA 233
N S ++R L +D G G G +T ++ + ++ V+ +VQ A
Sbjct: 60 INSSRKFLQRFLREGPNKTGTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQ-A 118
Query: 234 PSYAGVE------HVGGNMFDSVPEGDA---ILMKWILHCWDDDHCLRILKNCYKAIPDN 284
+Y G E + + D PE D+ I ++W++ D H L+ C ++ N
Sbjct: 119 KTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPN 178
Query: 285 GKVIVMNSIVPE---IPEVSSSA 304
G +++ +++ E + +V SS
Sbjct: 179 GIIVIKDNMAQEGVILDDVDSSV 201
>pdb|3MCZ|A Chain A, The Structure Of An O-Methyltransferase Family Protein
From Burkholderia Thailandensis.
pdb|3MCZ|B Chain B, The Structure Of An O-Methyltransferase Family Protein
From Burkholderia Thailandensis
Length = 352
Score = 34.7 bits (78), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/140 (18%), Positives = 58/140 (41%), Gaps = 15/140 (10%)
Query: 167 NETYHKAMFNHSTIAMER----ILEHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAV 222
++T + FN + + + + ++ F ++D+ GG G L+ + ++PQ+
Sbjct: 148 HDTRARDAFNDAXVRLSQPXVDVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQ 207
Query: 223 NFDLPHVVQDAPSYAGVEHVGG-------NMFDSVP-EG---DAILMKWILHCWDDDHCL 271
+DLP A +GG N+ D+ EG D + + LH +D
Sbjct: 208 IWDLPTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVXLNDCLHYFDAREAR 267
Query: 272 RILKNCYKAIPDNGKVIVMN 291
++ + + G ++++
Sbjct: 268 EVIGHAAGLVKPGGALLILT 287
>pdb|1EZV|E Chain E, Structure Of The Yeast Cytochrome Bc1 Complex Co-
Crystallized With An Antibody Fv-Fragment
pdb|1KYO|E Chain E, Yeast Cytochrome Bc1 Complex With Bound Substrate
Cytochrome C
pdb|1KYO|P Chain P, Yeast Cytochrome Bc1 Complex With Bound Substrate
Cytochrome C
pdb|1KB9|E Chain E, Yeast Cytochrome Bc1 Complex
pdb|1P84|E Chain E, Hdbt Inhibited Yeast Cytochrome Bc1 Complex
pdb|2IBZ|E Chain E, Yeast Cytochrome Bc1 Complex With Stigmatellin
pdb|3CX5|E Chain E, Structure Of Complex Iii With Bound Cytochrome C In
Reduced State And Definition Of A Minimal Core
Interface For Electron Transfer.
pdb|3CX5|P Chain P, Structure Of Complex Iii With Bound Cytochrome C In
Reduced State And Definition Of A Minimal Core
Interface For Electron Transfer.
pdb|3CXH|E Chain E, Structure Of Yeast Complex Iii With Isoform-2 Cytochrome
C Bound And Definition Of A Minimal Core Interface For
Electron Transfer.
pdb|3CXH|P Chain P, Structure Of Yeast Complex Iii With Isoform-2 Cytochrome
C Bound And Definition Of A Minimal Core Interface For
Electron Transfer
Length = 185
Score = 28.1 bits (61), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 30/57 (52%)
Query: 11 KQNNKYEEEESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKAGKLSAPEIAAQLQA 67
K+NN ++ SY++ M AMG++ ++ ++ + + A A L+ ++ L A
Sbjct: 14 KENNDADKGRSYAYFMVGAMGLLSSAGAKSTVETFISSMTATADVLAMAKVEVNLAA 70
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,733,186
Number of Sequences: 62578
Number of extensions: 460490
Number of successful extensions: 1096
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1037
Number of HSP's gapped (non-prelim): 26
length of query: 357
length of database: 14,973,337
effective HSP length: 100
effective length of query: 257
effective length of database: 8,715,537
effective search space: 2239893009
effective search space used: 2239893009
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)