Query 018367
Match_columns 357
No_of_seqs 280 out of 1625
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 14:09:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018367.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018367hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s40_A Diacylglycerol kinase; 100.0 8.1E-33 2.8E-37 266.2 15.8 184 78-346 5-190 (304)
2 2qv7_A Diacylglycerol kinase D 100.0 6.7E-30 2.3E-34 248.8 13.1 182 81-346 24-207 (337)
3 2bon_A Lipid kinase; DAG kinas 100.0 4.6E-29 1.6E-33 242.7 15.4 185 81-351 29-215 (332)
4 2an1_A Putative kinase; struct 99.0 6.5E-10 2.2E-14 105.5 9.7 125 81-231 5-132 (292)
5 1yt5_A Inorganic polyphosphate 98.8 2.9E-09 9.9E-14 99.9 6.5 108 83-231 2-109 (258)
6 2i2c_A Probable inorganic poly 98.7 5E-08 1.7E-12 92.1 10.8 104 83-231 2-106 (272)
7 1u0t_A Inorganic polyphosphate 98.7 3.9E-08 1.3E-12 94.4 9.6 129 81-229 4-142 (307)
8 3afo_A NADH kinase POS5; alpha 98.2 5.7E-06 1.9E-10 82.1 9.7 160 52-230 11-183 (388)
9 1z0s_A Probable inorganic poly 94.9 0.036 1.2E-06 52.4 6.3 55 148-217 68-122 (278)
10 3pfn_A NAD kinase; structural 92.8 0.19 6.7E-06 49.2 7.1 67 148-228 108-174 (365)
11 3hl0_A Maleylacetate reductase 88.2 1.7 5.9E-05 41.9 9.1 107 60-184 8-119 (353)
12 3jzd_A Iron-containing alcohol 85.5 2.4 8.3E-05 40.9 8.5 105 62-184 13-121 (358)
13 3uhj_A Probable glycerol dehyd 83.3 2.3 7.9E-05 41.6 7.2 109 56-184 24-138 (387)
14 1o2d_A Alcohol dehydrogenase, 80.3 16 0.00054 35.1 11.9 117 59-190 15-156 (371)
15 1oj7_A Hypothetical oxidoreduc 78.9 11 0.00038 36.7 10.4 118 60-191 27-168 (408)
16 2gru_A 2-deoxy-scyllo-inosose 76.8 5.8 0.0002 38.2 7.6 92 81-184 34-128 (368)
17 3okf_A 3-dehydroquinate syntha 75.7 6.8 0.00023 38.4 7.8 93 80-184 61-157 (390)
18 3iv7_A Alcohol dehydrogenase I 75.6 6.5 0.00022 38.0 7.6 84 81-184 37-120 (364)
19 3ox4_A Alcohol dehydrogenase 2 74.3 9.7 0.00033 36.8 8.5 117 59-190 5-146 (383)
20 3qbe_A 3-dehydroquinate syntha 69.7 8 0.00027 37.6 6.7 90 82-184 44-137 (368)
21 1pfk_A Phosphofructokinase; tr 68.6 11 0.00039 35.9 7.4 37 150-191 96-132 (320)
22 1jq5_A Glycerol dehydrogenase; 68.6 14 0.00048 35.3 8.1 110 58-188 5-124 (370)
23 3clh_A 3-dehydroquinate syntha 63.5 5.7 0.0002 37.9 4.2 91 81-183 26-118 (343)
24 1ujn_A Dehydroquinate synthase 62.7 14 0.00049 35.2 6.9 90 81-184 28-118 (348)
25 1zxx_A 6-phosphofructokinase; 61.0 12 0.00042 35.6 5.9 37 150-191 95-131 (319)
26 2hig_A 6-phospho-1-fructokinas 58.8 14 0.00047 37.4 6.1 41 149-191 190-233 (487)
27 1vlj_A NADH-dependent butanol 57.6 37 0.0013 32.9 8.9 120 60-191 18-160 (407)
28 1sg6_A Pentafunctional AROM po 56.8 6.3 0.00021 38.4 3.2 40 150-191 107-148 (393)
29 1ta9_A Glycerol dehydrogenase; 55.8 22 0.00074 35.3 7.0 111 53-184 59-177 (450)
30 3ce9_A Glycerol dehydrogenase; 55.3 20 0.00067 34.0 6.4 107 59-186 8-122 (354)
31 4a3s_A 6-phosphofructokinase; 55.1 20 0.00069 34.1 6.3 38 149-191 94-131 (319)
32 3bfj_A 1,3-propanediol oxidore 54.8 76 0.0026 30.3 10.6 121 59-190 7-150 (387)
33 3ors_A N5-carboxyaminoimidazol 53.1 51 0.0017 28.4 7.9 32 150-187 61-92 (163)
34 1xah_A Sadhqs, 3-dehydroquinat 51.4 12 0.0004 35.8 4.1 90 82-184 32-124 (354)
35 3rf7_A Iron-containing alcohol 50.2 80 0.0028 30.4 9.9 113 56-184 21-159 (375)
36 4hf7_A Putative acylhydrolase; 48.6 8.6 0.00029 33.0 2.4 61 153-217 56-116 (209)
37 2f48_A Diphosphate--fructose-6 42.9 30 0.001 35.5 5.7 41 150-191 168-210 (555)
38 3hbm_A UDP-sugar hydrolase; PS 40.5 55 0.0019 30.2 6.8 35 141-184 218-252 (282)
39 1rrm_A Lactaldehyde reductase; 39.3 54 0.0019 31.3 6.7 119 59-190 5-148 (386)
40 4grd_A N5-CAIR mutase, phospho 38.5 1.7E+02 0.0058 25.4 9.0 30 150-185 70-99 (173)
41 1sfu_A 34L protein; protein/Z- 34.3 20 0.00068 27.1 2.1 31 186-223 31-62 (75)
42 3hno_A Pyrophosphate-dependent 33.8 53 0.0018 32.4 5.7 41 150-191 106-148 (419)
43 1xmp_A PURE, phosphoribosylami 31.4 1.6E+02 0.0056 25.4 7.7 32 150-187 69-100 (170)
44 3o8l_A 6-phosphofructokinase, 31.2 52 0.0018 35.1 5.4 42 150-192 491-535 (762)
45 3kuu_A Phosphoribosylaminoimid 31.1 2.6E+02 0.0089 24.2 9.0 30 150-184 70-99 (174)
46 2x9a_A Attachment protein G3P; 30.2 13 0.00044 27.2 0.4 11 151-161 40-50 (65)
47 3gw6_A Endo-N-acetylneuraminid 30.1 16 0.00055 34.1 1.1 14 150-163 47-60 (275)
48 3lp6_A Phosphoribosylaminoimid 29.1 2.1E+02 0.0073 24.7 8.1 32 150-187 65-96 (174)
49 1o4v_A Phosphoribosylaminoimid 28.3 3E+02 0.01 24.0 9.2 85 82-187 13-102 (183)
50 3opy_A 6-phosphofructo-1-kinas 26.6 1.3E+02 0.0046 32.9 7.6 42 149-191 689-733 (989)
51 3dc7_A Putative uncharacterize 26.0 39 0.0013 28.9 2.9 65 151-218 56-126 (232)
52 2ywx_A Phosphoribosylaminoimid 25.5 1.7E+02 0.0059 24.9 6.7 30 149-183 53-82 (157)
53 3o8o_B 6-phosphofructokinase s 24.7 1.5E+02 0.005 31.6 7.4 44 149-192 99-160 (766)
54 3o8o_A 6-phosphofructokinase s 24.7 84 0.0029 33.6 5.6 43 150-192 101-161 (787)
55 3o8l_A 6-phosphofructokinase, 24.6 1.4E+02 0.0049 31.7 7.3 43 149-191 110-170 (762)
56 1u11_A PURE (N5-carboxyaminoim 23.9 3.6E+02 0.012 23.5 8.6 30 150-184 79-108 (182)
57 3oow_A Phosphoribosylaminoimid 23.9 3.5E+02 0.012 23.2 9.3 32 150-187 63-94 (166)
58 3opy_B 6-phosphofructo-1-kinas 22.0 1.5E+02 0.0052 32.3 7.0 42 149-191 663-707 (941)
59 3trh_A Phosphoribosylaminoimid 21.8 3.1E+02 0.011 23.6 7.7 29 150-184 64-92 (169)
60 3o8o_A 6-phosphofructokinase s 20.1 1.8E+02 0.0061 31.1 6.9 42 149-191 484-528 (787)
No 1
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=100.00 E-value=8.1e-33 Score=266.16 Aligned_cols=184 Identities=18% Similarity=0.186 Sum_probs=129.1
Q ss_pred CCCCCcEEEEEcCCCCCCChhhHHHHHHHhhccCcE-EEee-ccChhhHHHHHHHHHHHhhhccchhhhhhccCcEEEEE
Q 018367 78 LIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLG-EKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVA 155 (357)
Q Consensus 78 ~~~~~~vlvIvNP~SG~~~g~~~~~~~~~~L~~~~V-~~l~-~~~p~~~~~~~~~~l~~l~~~~~~lA~~~~~~~~VVv~ 155 (357)
..++++++||+||+||++++.+.+..+++.|....+ +.+. .+.++++.+ +.+.+ ..+.+.||++
T Consensus 5 ~~~m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~~~a~~-~~~~~-------------~~~~d~vv~~ 70 (304)
T 3s40_A 5 KTKFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQGDATK-YCQEF-------------ASKVDLIIVF 70 (304)
T ss_dssp CCSCSSEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCSTTHHHH-HHHHH-------------TTTCSEEEEE
T ss_pred cCCCCEEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccCcchHHH-HHHHh-------------hcCCCEEEEE
Confidence 345789999999999999999999999998875432 2222 235666543 22221 1245689999
Q ss_pred cCchHHHHHHHHHHhCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeeeEEEEEEeeeecCC
Q 018367 156 GGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAP 235 (357)
Q Consensus 156 GGDGTVneVln~L~~~~~~~~~plgIIP~GTGNDfARsLG~~~~~~~~~~~~~~~~l~~I~~~~~~~iD~~~v~~~~~~~ 235 (357)
|||||||||+|++... ...+|||+||+||||||||+||+|. ++.++++.|.+++.+++|+|+++
T Consensus 71 GGDGTl~~v~~~l~~~--~~~~~l~iiP~Gt~N~~ar~lg~~~--------~~~~a~~~i~~g~~~~iDlg~v~------ 134 (304)
T 3s40_A 71 GGDGTVFECTNGLAPL--EIRPTLAIIPGGTCNDFSRTLGVPQ--------NIAEAAKLITKEHVKPVDVAKAN------ 134 (304)
T ss_dssp ECHHHHHHHHHHHTTC--SSCCEEEEEECSSCCHHHHHTTCCS--------SHHHHHHHHTTCCEEEEEEEEET------
T ss_pred ccchHHHHHHHHHhhC--CCCCcEEEecCCcHHHHHHHcCCCc--------cHHHHHHHHHhCCeEEEEEEEEC------
Confidence 9999999999999863 3578999999999999999999997 68889999999999999999884
Q ss_pred CCCCCCCCCCCCCCccccccccccccccccccCcceeccceeeeeccchhHHHHHHHHhhhhcCcccccccccchHHHHH
Q 018367 236 KEGSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLK 315 (357)
Q Consensus 236 ~~g~~~~~~~~~~p~s~~~~~~~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~Va~~f~~~R~~~p~~f~~rl~nkl~Y~~ 315 (357)
+ ++|+|++|+||||+|++.++..++ +..|++.|++
T Consensus 135 --------------------------~-----------~~F~~~~~~G~da~v~~~~~~~~k--------~~~G~~~Y~~ 169 (304)
T 3s40_A 135 --------------------------G-----------QHFLNFWGIGLVSEVSNNIDAEEK--------AKLGKIGYYL 169 (304)
T ss_dssp --------------------------T-----------EEESSEEEEC--------------------------CHHHHT
T ss_pred --------------------------C-----------EEEEEEEeehHHHHHHHhcCHHHh--------hcCCchHHHH
Confidence 0 479999999999999999876543 4679999999
Q ss_pred HhhhccccccccCCCcccCccceEEEEEecc
Q 018367 316 LAGTQGWFLAPLLHPSSRNIAQMAKVKIMKK 346 (357)
Q Consensus 316 ~g~k~~~~~~~l~~~~~~~~~~~~~v~vd~~ 346 (357)
.++++ ++++ + ...++|++|++
T Consensus 170 ~~l~~------l~~~--~--~~~~~i~~dg~ 190 (304)
T 3s40_A 170 STIRT------VKNA--E--TFPVKITYDGQ 190 (304)
T ss_dssp TTC--------------C--CEEEEEEETTE
T ss_pred HHHHH------Hhhc--C--CceEEEEECCE
Confidence 99998 7642 2 26789999986
No 2
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=99.96 E-value=6.7e-30 Score=248.76 Aligned_cols=182 Identities=19% Similarity=0.171 Sum_probs=133.8
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHhhccCcE-EEeec-cChhhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCc
Q 018367 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGE-KAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGD 158 (357)
Q Consensus 81 ~~~vlvIvNP~SG~~~g~~~~~~~~~~L~~~~V-~~l~~-~~p~~~~~~~~~~l~~l~~~~~~lA~~~~~~~~VVv~GGD 158 (357)
+++++||+||.||++++.++++.+++.|....+ +.+.. +.++++.+ +.+.+ + ..+.+.||++|||
T Consensus 24 m~~i~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t~~~~~a~~-~~~~~----------~--~~~~d~vvv~GGD 90 (337)
T 2qv7_A 24 RKRARIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEKIGDATL-EAERA----------M--HENYDVLIAAGGD 90 (337)
T ss_dssp CEEEEEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECCSTTHHHH-HHHHH----------T--TTTCSEEEEEECH
T ss_pred cceEEEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEecCcchHHH-HHHHH----------h--hcCCCEEEEEcCc
Confidence 467999999999999999999999999876543 33322 34455432 21111 0 1235789999999
Q ss_pred hHHHHHHHHHHhCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeeeEEEEEEeeeecCCCCC
Q 018367 159 GTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEG 238 (357)
Q Consensus 159 GTVneVln~L~~~~~~~~~plgIIP~GTGNDfARsLG~~~~~~~~~~~~~~~~l~~I~~~~~~~iD~~~v~~~~~~~~~g 238 (357)
|||+||++++.+. ...+|||+||+||+|||||+||++. ++.++++.|.+|+.+++|+|+++
T Consensus 91 GTv~~v~~~l~~~--~~~~pl~iIP~GT~N~lAr~Lg~~~--------~~~~al~~i~~g~~~~iD~g~v~--------- 151 (337)
T 2qv7_A 91 GTLNEVVNGIAEK--PNRPKLGVIPMGTVNDFGRALHIPN--------DIMGALDVIIEGHSTKVDIGKMN--------- 151 (337)
T ss_dssp HHHHHHHHHHTTC--SSCCEEEEEECSSCCHHHHHTTCCS--------SHHHHHHHHHHTCEEEEEEEEET---------
T ss_pred hHHHHHHHHHHhC--CCCCcEEEecCCcHhHHHHHcCCCC--------CHHHHHHHHHcCCcEEEEEEEEC---------
Confidence 9999999999642 3579999999999999999999997 68889999999999999999884
Q ss_pred CCCCCCCCCCCccccccccccccccccccCcceeccceeeeeccchhHHHHHHHHhhhhcCcccccccccchHHHHHHhh
Q 018367 239 SFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAG 318 (357)
Q Consensus 239 ~~~~~~~~~~p~s~~~~~~~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~Va~~f~~~R~~~p~~f~~rl~nkl~Y~~~g~ 318 (357)
+ ++|+|++|+|+||+|+..++..++ +..|++.|++.++
T Consensus 152 -----------------------~-----------r~fl~~~~~G~~a~v~~~~~~~~k--------~~~G~~~Y~~~~l 189 (337)
T 2qv7_A 152 -----------------------N-----------RYFINLAAGGQLTQVSYETPSKLK--------SIVGPFAYYIKGF 189 (337)
T ss_dssp -----------------------T-----------EEESSEEEEECBCC---------------------CGGGSCCCTT
T ss_pred -----------------------C-----------EEEEEEeeecccHHHHHHhhHHHH--------hccChHHHHHHHH
Confidence 0 479999999999999998876643 4568999999999
Q ss_pred hccccccccCCCcccCccceEEEEEecc
Q 018367 319 TQGWFLAPLLHPSSRNIAQMAKVKIMKK 346 (357)
Q Consensus 319 k~~~~~~~l~~~~~~~~~~~~~v~vd~~ 346 (357)
+. ++. .+. ..++|++|++
T Consensus 190 ~~------l~~--~~~--~~~~i~~dg~ 207 (337)
T 2qv7_A 190 EM------LPQ--MKA--VDLRIEYDGN 207 (337)
T ss_dssp TT------GGG--BCC--EEEEEEETTE
T ss_pred HH------HHh--CCC--ccEEEEECCE
Confidence 98 652 222 5788899986
No 3
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=99.96 E-value=4.6e-29 Score=242.71 Aligned_cols=185 Identities=18% Similarity=0.194 Sum_probs=132.1
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHhhccCcE-EEeec-cChhhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCc
Q 018367 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGE-KAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGD 158 (357)
Q Consensus 81 ~~~vlvIvNP~SG~~~g~~~~~~~~~~L~~~~V-~~l~~-~~p~~~~~~~~~~l~~l~~~~~~lA~~~~~~~~VVv~GGD 158 (357)
+++++||+||.||++ +.++.+.+.|....+ +.+.. ..++++.+ +.+.+. ..+.+.|||+|||
T Consensus 29 ~~~~~vi~Np~sg~~---~~~~~i~~~l~~~g~~~~~~~t~~~~~~~~-~~~~~~------------~~~~d~vvv~GGD 92 (332)
T 2bon_A 29 FPASLLILNGKSTDN---LPLREAIMLLREEGMTIHVRVTWEKGDAAR-YVEEAR------------KFGVATVIAGGGD 92 (332)
T ss_dssp -CCEEEEECSSSTTC---HHHHHHHHHHHTTTCCEEEEECCSTTHHHH-HHHHHH------------HHTCSEEEEEESH
T ss_pred cceEEEEECCCCCCC---chHHHHHHHHHHcCCcEEEEEecCcchHHH-HHHHHH------------hcCCCEEEEEccc
Confidence 578999999999977 567778877765432 22222 24555432 211110 0245789999999
Q ss_pred hHHHHHHHHHHhCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeeeEEEEEEeeeecCCCCC
Q 018367 159 GTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEG 238 (357)
Q Consensus 159 GTVneVln~L~~~~~~~~~plgIIP~GTGNDfARsLG~~~~~~~~~~~~~~~~l~~I~~~~~~~iD~~~v~~~~~~~~~g 238 (357)
|||+||++++.+......+|||+||+||+|||||+|||+. ++.++++.|.+++.+++|+|+++-
T Consensus 93 GTl~~v~~~l~~~~~~~~~plgiiP~Gt~N~fa~~l~i~~--------~~~~al~~i~~g~~~~iDlg~v~~-------- 156 (332)
T 2bon_A 93 GTINEVSTALIQCEGDDIPALGILPLGTANDFATSVGIPE--------ALDKALKLAIAGDAIAIDMAQVNK-------- 156 (332)
T ss_dssp HHHHHHHHHHHHCCSSCCCEEEEEECSSSCHHHHHTTCCS--------SHHHHHHHHHHSEEEEEEEEEETT--------
T ss_pred hHHHHHHHHHhhcccCCCCeEEEecCcCHHHHHHhcCCCC--------CHHHHHHHHHcCCeEEeeEEEECC--------
Confidence 9999999999853223578999999999999999999987 688899999999999999998840
Q ss_pred CCCCCCCCCCCccccccccccccccccccCcceeccceeeeeccchhHHHHHHHHhhhhcCcccccccccchHHHHHHhh
Q 018367 239 SFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAG 318 (357)
Q Consensus 239 ~~~~~~~~~~p~s~~~~~~~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~Va~~f~~~R~~~p~~f~~rl~nkl~Y~~~g~ 318 (357)
+++|+|++|+||||+|++.++..++ +..|++.|++.++
T Consensus 157 ----------------------------------r~~fl~~~~~G~da~v~~~~~~~~k--------~~~G~~~Y~~~~l 194 (332)
T 2bon_A 157 ----------------------------------QTCFINMATGGFGTRITTETPEKLK--------AALGSVSYIIHGL 194 (332)
T ss_dssp ----------------------------------SCEESSEEEEEEEEEC------------------CCHHHHHHHHHT
T ss_pred ----------------------------------ceEEEEEEeECccHHHHHHhhHHhH--------hcccHHHHHHHHH
Confidence 0279999999999999988765433 3569999999999
Q ss_pred hccccccccCCCcccCccceEEEEEeccCCCeE
Q 018367 319 TQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWE 351 (357)
Q Consensus 319 k~~~~~~~l~~~~~~~~~~~~~v~vd~~~~~~~ 351 (357)
+. ++. .+. ..++|++|++ .|+
T Consensus 195 ~~------l~~--~~~--~~~~i~~dg~--~~~ 215 (332)
T 2bon_A 195 MR------MDT--LQP--DRCEIRGENF--HWQ 215 (332)
T ss_dssp SC------EEE--EEC--EEEEEEETTE--EEE
T ss_pred HH------Hhh--CCC--eeEEEEECCE--EEE
Confidence 88 542 222 5788888886 554
No 4
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=99.03 E-value=6.5e-10 Score=105.52 Aligned_cols=125 Identities=10% Similarity=0.019 Sum_probs=75.1
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHhhccCcE-EEeeccChhhHHHHHHHHHHHhhhccchhhh--hhccCcEEEEEcC
Q 018367 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFAS--EIEKRLRLIVAGG 157 (357)
Q Consensus 81 ~~~vlvIvNP~SG~~~g~~~~~~~~~~L~~~~V-~~l~~~~p~~~~~~~~~~l~~l~~~~~~lA~--~~~~~~~VVv~GG 157 (357)
++++++|+||.++ ...+.+..+.+.|....+ +.+...... .+. .... ..++. ...+.+.||++||
T Consensus 5 mkki~ii~np~~~--~~~~~~~~i~~~l~~~g~~v~~~~~~~~--------~~~-~~~~-~~~~~~~~~~~~D~vi~~GG 72 (292)
T 2an1_A 5 FKCIGIVGHPRHP--TALTTHEMLYRWLCDQGYEVIVEQQIAH--------ELQ-LKNV-PTGTLAEIGQQADLAVVVGG 72 (292)
T ss_dssp CCEEEEECC---------CHHHHHHHHHHHTTCEEEEEHHHHH--------HTT-CSSC-CEECHHHHHHHCSEEEECSC
T ss_pred CcEEEEEEcCCCH--HHHHHHHHHHHHHHHCCCEEEEecchhh--------hcc-cccc-cccchhhcccCCCEEEEEcC
Confidence 4789999999864 445677788877765443 222211000 000 0000 00000 0124578999999
Q ss_pred chHHHHHHHHHHhCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeeeEEEEEEeee
Q 018367 158 DGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMR 231 (357)
Q Consensus 158 DGTVneVln~L~~~~~~~~~plgIIP~GTGNDfARsLG~~~~~~~~~~~~~~~~l~~I~~~~~~~iD~~~v~~~ 231 (357)
|||++++++++... ..|.||| |+||.|+|++ ++ +. +++++++.|.+|+.+--++..+++.
T Consensus 73 DGT~l~a~~~~~~~---~~P~lGI-~~Gt~gfla~-~~-~~--------~~~~al~~i~~g~~~~~~r~~l~~~ 132 (292)
T 2an1_A 73 DGNMLGAARTLARY---DINVIGI-NRGNLGFLTD-LD-PD--------NALQQLSDVLEGRYISEKRFLLEAQ 132 (292)
T ss_dssp HHHHHHHHHHHTTS---SCEEEEB-CSSSCCSSCC-BC-TT--------SHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred cHHHHHHHHHhhcC---CCCEEEE-ECCCcccCCc-CC-HH--------HHHHHHHHHHcCCCEEEEeEEEEEE
Confidence 99999999999753 2344777 8999888886 45 54 6889999999998765566666554
No 5
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=98.84 E-value=2.9e-09 Score=99.87 Aligned_cols=108 Identities=21% Similarity=0.252 Sum_probs=75.7
Q ss_pred cEEEEEcCCCCCCChhhHHHHHHHhhccCcEEEeeccChhhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHH
Q 018367 83 PVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTAS 162 (357)
Q Consensus 83 ~vlvIvNP~SG~~~g~~~~~~~~~~L~~~~V~~l~~~~p~~~~~~~~~~l~~l~~~~~~lA~~~~~~~~VVv~GGDGTVn 162 (357)
++.||+||.||.+ +.++++.+.+.|.. ++++. . .+. . ..+.+.||++|||||++
T Consensus 2 ki~ii~Np~~~~~-~~~~~~~i~~~l~~---~~~~~-~-~~~-----------------~---~~~~D~vv~~GGDGTll 55 (258)
T 1yt5_A 2 KIAILYREEREKE-GEFLKEKISKEHEV---IEFGE-A-NAP-----------------G---RVTADLIVVVGGDGTVL 55 (258)
T ss_dssp EEEEEECGGGHHH-HHHHHHHHTTTSEE---EEEEE-S-SSC-----------------S---CBCCSEEEEEECHHHHH
T ss_pred EEEEEEeCCCchH-HHHHHHHHHHHhcC---Cceec-c-ccc-----------------c---cCCCCEEEEEeCcHHHH
Confidence 5899999999987 77888888877762 22221 1 000 0 12457899999999999
Q ss_pred HHHHHHHhCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeeeEEEEEEeee
Q 018367 163 WLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMR 231 (357)
Q Consensus 163 eVln~L~~~~~~~~~plgIIP~GTGNDfARsLG~~~~~~~~~~~~~~~~l~~I~~~~~~~iD~~~v~~~ 231 (357)
++++.+.. ..|.+|| ++||.+.|+ .+. +. ++.++++.+.+|+.+--++..++..
T Consensus 56 ~~a~~~~~----~~PilGI-n~G~~Gfl~-~~~-~~--------~~~~al~~i~~g~~~i~~r~~l~~~ 109 (258)
T 1yt5_A 56 KAAKKAAD----GTPMVGF-KAGRLGFLT-SYT-LD--------EIDRFLEDLRNWNFREETRWFIQIE 109 (258)
T ss_dssp HHHTTBCT----TCEEEEE-ESSSCCSSC-CBC-GG--------GHHHHHHHHHTTCCEEEEEEEEEEE
T ss_pred HHHHHhCC----CCCEEEE-ECCCCCccC-cCC-HH--------HHHHHHHHHHcCCceEEEEEEEEEE
Confidence 99988763 2344777 599996555 565 44 7899999999998764455555443
No 6
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=98.72 E-value=5e-08 Score=92.07 Aligned_cols=104 Identities=10% Similarity=0.066 Sum_probs=73.3
Q ss_pred cEEEEEcCCCCCCChhhHHHHHHHhhccCcEEEeeccChhhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHH
Q 018367 83 PVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTAS 162 (357)
Q Consensus 83 ~vlvIvNP~SG~~~g~~~~~~~~~~L~~~~V~~l~~~~p~~~~~~~~~~l~~l~~~~~~lA~~~~~~~~VVv~GGDGTVn 162 (357)
++.+|+||+ .++.+.++.+.+.|....+ ++.. .+.+.||++|||||+.
T Consensus 2 ki~ii~n~~---~~~~~~~~~l~~~l~~~g~-~v~~----------------------------~~~D~vv~lGGDGT~l 49 (272)
T 2i2c_A 2 KYMITSKGD---EKSDLLRLNMIAGFGEYDM-EYDD----------------------------VEPEIVISIGGDGTFL 49 (272)
T ss_dssp EEEEEECCS---HHHHHHHHHHHHHHTTSSC-EECS----------------------------SSCSEEEEEESHHHHH
T ss_pred EEEEEECCC---HHHHHHHHHHHHHHHHCCC-EeCC----------------------------CCCCEEEEEcCcHHHH
Confidence 588999963 3556777888888875443 1110 1346899999999999
Q ss_pred HHHHHHHhCCCCCCCC-EEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeeeEEEEEEeee
Q 018367 163 WLLGVVSDLKLPHSPP-VATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMR 231 (357)
Q Consensus 163 eVln~L~~~~~~~~~p-lgIIP~GTGNDfARsLG~~~~~~~~~~~~~~~~l~~I~~~~~~~iD~~~v~~~ 231 (357)
.+++.+... ...+| +|| |+|| ++|+..+. +. +++++++.+.+|+.+--++..+...
T Consensus 50 ~aa~~~~~~--~~~~PilGI-n~G~-lgfl~~~~-~~--------~~~~~l~~l~~g~~~i~~r~~L~~~ 106 (272)
T 2i2c_A 50 SAFHQYEER--LDEIAFIGI-HTGH-LGFYADWR-PA--------EADKLVKLLAKGEYQKVSYPLLKTT 106 (272)
T ss_dssp HHHHHTGGG--TTTCEEEEE-ESSS-CCSSCCBC-GG--------GHHHHHHHHHTTCCEEEEEEEEEEE
T ss_pred HHHHHHhhc--CCCCCEEEE-eCCC-CCcCCcCC-HH--------HHHHHHHHHHcCCCEEEEEEEEEEE
Confidence 999998642 01456 776 9999 66888875 44 6889999999997665555555443
No 7
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=98.70 E-value=3.9e-08 Score=94.41 Aligned_cols=129 Identities=17% Similarity=0.163 Sum_probs=75.0
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHhhccCcE-EEeeccChhhHH--HH----HHH---HHHHhhhccchhhhhhccCc
Q 018367 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVL--HQ----LYV---TLEKFKAAGDVFASEIEKRL 150 (357)
Q Consensus 81 ~~~vlvIvNP~SG~~~g~~~~~~~~~~L~~~~V-~~l~~~~p~~~~--~~----~~~---~l~~l~~~~~~lA~~~~~~~ 150 (357)
++++++|+||.++ ...+.+..+.+.|....+ +.+......... .. +.. .++.... +. + ...+.+
T Consensus 4 m~ki~iI~n~~~~--~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~-~-~~~~~d 77 (307)
T 1u0t_A 4 HRSVLLVVHTGRD--EATETARRVEKVLGDNKIALRVLSAEAVDRGSLHLAPDDMRAMGVEIEVVDA--DQ-H-AADGCE 77 (307)
T ss_dssp -CEEEEEESSSGG--GGSHHHHHHHHHHHTTTCEEEEEC---------------------------------------CC
T ss_pred CCEEEEEEeCCCH--HHHHHHHHHHHHHHHCCCEEEEecchhhhhhccccccccccccccccccccc--cc-c-cccCCC
Confidence 5789999999986 445677888888865443 222221111100 00 000 0000000 00 0 012457
Q ss_pred EEEEEcCchHHHHHHHHHHhCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeeeEEEEEEe
Q 018367 151 RLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHIL 229 (357)
Q Consensus 151 ~VVv~GGDGTVneVln~L~~~~~~~~~plgIIP~GTGNDfARsLG~~~~~~~~~~~~~~~~l~~I~~~~~~~iD~~~v~ 229 (357)
.||++|||||++++++.+... ..|.+|| ++||.|.|+. +. +. +++++++.+.+|+...-++..+.
T Consensus 78 ~vi~~GGDGT~l~a~~~~~~~---~~pvlgi-~~G~~gfl~~-~~-~~--------~~~~~~~~i~~g~~~~~~r~~l~ 142 (307)
T 1u0t_A 78 LVLVLGGDGTFLRAAELARNA---SIPVLGV-NLGRIGFLAE-AE-AE--------AIDAVLEHVVAQDYRVEDRLTLD 142 (307)
T ss_dssp CEEEEECHHHHHHHHHHHHHH---TCCEEEE-ECSSCCSSCS-EE-GG--------GHHHHHHHHHHTCCEEEEECCEE
T ss_pred EEEEEeCCHHHHHHHHHhccC---CCCEEEE-eCCCCccCcc-cC-HH--------HHHHHHHHHHcCCcEEEEEEEEE
Confidence 799999999999999998753 2344775 8999999985 42 43 78899999999987655554443
No 8
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=98.16 E-value=5.7e-06 Score=82.12 Aligned_cols=160 Identities=13% Similarity=0.140 Sum_probs=88.2
Q ss_pred ccccccccccccCeEEecCCccc-cccCCCCCcEEEEEcCCCCCCChhhHHHHHHHhhccC--cE-EEeeccChhhHHHH
Q 018367 52 PKSKILNNYYIPNYILVSGSEVQ-RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QV-IDLGEKAPDKVLHQ 127 (357)
Q Consensus 52 ~~~~~~~~~~~p~~~~~~~~~~~-~~~~~~~~~vlvIvNP~SG~~~g~~~~~~~~~~L~~~--~V-~~l~~~~p~~~~~~ 127 (357)
..+..|+.-..|.|+-.|.++.. ..=..++++++||+||.. ....+.+..+.+.|... .+ +.+.. ...+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~k~V~II~n~~~--~~~~~~~~~l~~~L~~~~~gi~V~ve~-~~a~~--- 84 (388)
T 3afo_A 11 KPVNNLRSSSSADFVSPPNSKLQSLIWQNPLQNVYITKKPWT--PSTREAMVEFITHLHESYPEVNVIVQP-DVAEE--- 84 (388)
T ss_dssp EEGGGSCCCCCCEEEC----CCEEEECSSCCCEEEEEECTTC--HHHHHHHHHHHHHHHHHCTTCEEECCH-HHHHH---
T ss_pred eeHhhcCcccCcceEeCcchhheeeEccCCCcEEEEEEeCCC--HHHHHHHHHHHHHHHHhCCCeEEEEeC-chhhh---
Confidence 34666777778899888876422 222356789999999874 35556677777777543 22 22321 11111
Q ss_pred HHHHHHH---h----hh--ccchhhhhhccCcEEEEEcCchHHHHHHHHHHhCCCCCCCCEEEEeCCCCcchhhhcCCCC
Q 018367 128 LYVTLEK---F----KA--AGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGK 198 (357)
Q Consensus 128 ~~~~l~~---l----~~--~~~~lA~~~~~~~~VVv~GGDGTVneVln~L~~~~~~~~~plgIIP~GTGNDfARsLG~~~ 198 (357)
+...+.. . .. ..........+.+.||++|||||+..++..+.... -.|.||| ++||.+-|+ .+..
T Consensus 85 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DlVIvlGGDGTlL~aa~~~~~~~--vpPiLGI-N~G~lGFLt-~~~~-- 158 (388)
T 3afo_A 85 ISQDFKSPLENDPNRPHILYTGPEQDIVNRTDLLVTLGGDGTILHGVSMFGNTQ--VPPVLAF-ALGTLGFLS-PFDF-- 158 (388)
T ss_dssp HHTTCCSCGGGCTTSCEEEEECCHHHHHHHCSEEEEEESHHHHHHHHHTTTTSC--CCCEEEE-ECSSCCSSC-CEEG--
T ss_pred hhhhccccccccccccccccccchhhcccCCCEEEEEeCcHHHHHHHHHhcccC--CCeEEEE-ECCCcccCC-cCCh--
Confidence 1000000 0 00 00000000124578999999999999988775421 1134665 999885554 3432
Q ss_pred CCCCCchHHHHHHHHHHHcCCeeeEEEEEEee
Q 018367 199 KNPNTDQQAVLSFLEQVKNAKEMQIDSWHILM 230 (357)
Q Consensus 199 ~~~~~~~~~~~~~l~~I~~~~~~~iD~~~v~~ 230 (357)
++++++++.+.+|+..-..+-.+..
T Consensus 159 -------~~~~~al~~il~g~~~~~~r~~L~~ 183 (388)
T 3afo_A 159 -------KEHKKVFQEVISSRAKCLHRTRLEC 183 (388)
T ss_dssp -------GGHHHHHHHHHTTCCEEEEECCEEE
T ss_pred -------HHHHHHHHHHhcCCceEEEeeEEEE
Confidence 2788999999999765544444443
No 9
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=94.94 E-value=0.036 Score=52.37 Aligned_cols=55 Identities=18% Similarity=0.228 Sum_probs=33.7
Q ss_pred cCcEEEEEcCchHHHHHHHHHHhCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHc
Q 018367 148 KRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKN 217 (357)
Q Consensus 148 ~~~~VVv~GGDGTVneVln~L~~~~~~~~~plgIIP~GTGNDfARsLG~~~~~~~~~~~~~~~~l~~I~~ 217 (357)
+.+.||++|||||+-.++..+.. . +||-=|..||-+=|+. +.. ++++++++.+.+
T Consensus 68 ~~DlvIvlGGDGT~L~aa~~~~~----~-~PilGIN~G~lGFLt~---~~~-------~~~~~~l~~l~~ 122 (278)
T 1z0s_A 68 NFDFIVSVGGDGTILRILQKLKR----C-PPIFGINTGRVGLLTH---ASP-------ENFEVELKKAVE 122 (278)
T ss_dssp GSSEEEEEECHHHHHHHHTTCSS----C-CCEEEEECSSSCTTCC---BBT-------TBCHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHhCC----C-CcEEEECCCCCccccc---cCH-------HHHHHHHHHHHh
Confidence 34789999999999776544332 3 6766677885444442 111 245566666654
No 10
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=92.79 E-value=0.19 Score=49.15 Aligned_cols=67 Identities=24% Similarity=0.300 Sum_probs=42.1
Q ss_pred cCcEEEEEcCchHHHHHHHHHHhCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeeeEEEEE
Q 018367 148 KRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWH 227 (357)
Q Consensus 148 ~~~~VVv~GGDGTVneVln~L~~~~~~~~~plgIIP~GTGNDfARsLG~~~~~~~~~~~~~~~~l~~I~~~~~~~iD~~~ 227 (357)
..+.||++|||||+-.++..+.. ..+||-=|-+| .||.=... ..+++.++++.+.+|+..--.+-.
T Consensus 108 ~~DlvI~lGGDGT~L~aa~~~~~----~~~PvlGiN~G-------~LGFLt~~---~~~~~~~~l~~vl~g~~~v~~R~~ 173 (365)
T 3pfn_A 108 QIDFIICLGGDGTLLYASSLFQG----SVPPVMAFHLG-------SLGFLTPF---SFENFQSQVTQVIEGNAAVVLRSR 173 (365)
T ss_dssp TCSEEEEESSTTHHHHHHHHCSS----SCCCEEEEESS-------SCTTTCCE---ESTTHHHHHHHHHHSCCBEEEECC
T ss_pred CCCEEEEEcChHHHHHHHHHhcc----CCCCEEEEcCC-------CCccceee---cHHHHHHHHHHHHcCCCeEEEEee
Confidence 45789999999999888766543 34564333444 44543321 224688899999988765444333
Q ss_pred E
Q 018367 228 I 228 (357)
Q Consensus 228 v 228 (357)
+
T Consensus 174 L 174 (365)
T 3pfn_A 174 L 174 (365)
T ss_dssp E
T ss_pred E
Confidence 3
No 11
>3hl0_A Maleylacetate reductase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str}
Probab=88.19 E-value=1.7 Score=41.86 Aligned_cols=107 Identities=16% Similarity=0.150 Sum_probs=58.0
Q ss_pred cc-ccCeEEecCCc-cc---cccCCCCCcEEEEEcCCCCCCChhhHHHHHHHhhccCcEEEeeccChhhHHHHHHHHHHH
Q 018367 60 YY-IPNYILVSGSE-VQ---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEK 134 (357)
Q Consensus 60 ~~-~p~~~~~~~~~-~~---~~~~~~~~~vlvIvNP~SG~~~g~~~~~~~~~~L~~~~V~~l~~~~p~~~~~~~~~~l~~ 134 (357)
|. .|..++.-... .. .......++++|+..+.. ..+.+++.+.|....+.......|..-.+.+.+.++.
T Consensus 8 ~~~~p~~i~~G~g~~~~l~~~l~~~g~~r~liVtd~~~-----~~~~~~v~~~L~~~~~~v~~~v~~~p~~~~v~~~~~~ 82 (353)
T 3hl0_A 8 YMAAPARIVFSAGSSADVAEEIRRLGLSRALVLSTPQQ-----KGDAEALASRLGRLAAGVFSEAAMHTPVEVTKTAVEA 82 (353)
T ss_dssp CCCCCCCEEECTTGGGGHHHHHHHTTCCCEEEECCGGG-----HHHHHHHHHHHGGGEEEEECCCCTTCBHHHHHHHHHH
T ss_pred eecCCceEEECcCHHHHHHHHHHHhCCCEEEEEecCch-----hhHHHHHHHHHhhCCcEEecCcCCCCcHHHHHHHHHH
Confidence 44 67776654422 11 111223467888887642 2356777777765443222221222222223333322
Q ss_pred hhhccchhhhhhccCcEEEEEcCchHHHHHHHHHHhCCCCCCCCEEEEeC
Q 018367 135 FKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL 184 (357)
Q Consensus 135 l~~~~~~lA~~~~~~~~VVv~GGDGTVneVln~L~~~~~~~~~plgIIP~ 184 (357)
+.+ .+.+.||++|| |++..+...+.-. ..+|+..||-
T Consensus 83 ~~~---------~~~D~IIavGG-Gs~iD~aK~iA~~---~~~p~i~IPT 119 (353)
T 3hl0_A 83 YRA---------AGADCVVSLGG-GSTTGLGKAIALR---TDAAQIVIPT 119 (353)
T ss_dssp HHH---------TTCSEEEEEES-HHHHHHHHHHHHH---HCCEEEEEEC
T ss_pred Hhc---------cCCCEEEEeCC-cHHHHHHHHHHhc---cCCCEEEEeC
Confidence 111 24578999999 9999888777542 3678888885
No 12
>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural GENO joint center for structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha}
Probab=85.55 E-value=2.4 Score=40.92 Aligned_cols=105 Identities=11% Similarity=0.080 Sum_probs=57.2
Q ss_pred ccCeEEecCCc-cc---cccCCCCCcEEEEEcCCCCCCChhhHHHHHHHhhccCcEEEeeccChhhHHHHHHHHHHHhhh
Q 018367 62 IPNYILVSGSE-VQ---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKA 137 (357)
Q Consensus 62 ~p~~~~~~~~~-~~---~~~~~~~~~vlvIvNP~SG~~~g~~~~~~~~~~L~~~~V~~l~~~~p~~~~~~~~~~l~~l~~ 137 (357)
.|..++.-... .. .......++++|+..+.. ..+.+++.+.|....+..+....|..-.+.+.+.++.++
T Consensus 13 ~p~~i~~G~g~~~~l~~~l~~~g~~r~liVtd~~~-----~~~~~~v~~~L~~~~~~~f~~v~~~p~~~~v~~~~~~~~- 86 (358)
T 3jzd_A 13 HAARVVFGAGSSSQVAAEVERLGAKRALVLCTPNQ-----QAEAERIADLLGPLSAGVYAGAVMHVPIESARDATARAR- 86 (358)
T ss_dssp CCEEEEESTTGGGGHHHHHHHTTCSCEEEECCGGG-----HHHHHHHHHHHGGGEEEEECCCCTTCBHHHHHHHHHHHH-
T ss_pred CCceEEECCCHHHHHHHHHHHhCCCeEEEEeCCcH-----HHHHHHHHHHhccCCEEEecCCcCCCCHHHHHHHHHHhh-
Confidence 67776654422 11 111223467888887642 235677777776544322222222211222333332211
Q ss_pred ccchhhhhhccCcEEEEEcCchHHHHHHHHHHhCCCCCCCCEEEEeC
Q 018367 138 AGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL 184 (357)
Q Consensus 138 ~~~~lA~~~~~~~~VVv~GGDGTVneVln~L~~~~~~~~~plgIIP~ 184 (357)
+ .+.+.||++|| |++..+...+.-. ..+|+..||-
T Consensus 87 -------~-~~~D~IIavGG-GsviD~aK~iA~~---~~~p~i~IPT 121 (358)
T 3jzd_A 87 -------E-AGADCAVAVGG-GSTTGLGKAIALE---TGMPIVAIPT 121 (358)
T ss_dssp -------H-HTCSEEEEEES-HHHHHHHHHHHHH---HCCCEEEEEC
T ss_pred -------c-cCCCEEEEeCC-cHHHHHHHHHHhc---cCCCEEEEeC
Confidence 1 24578999999 9999888777542 3678888885
No 13
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=83.33 E-value=2.3 Score=41.58 Aligned_cols=109 Identities=13% Similarity=0.010 Sum_probs=57.7
Q ss_pred ccccccccCeEEecCCc-cc---cccCCCCCcEEEEEcCCCCCCChhhHHHHHHHhhcc-Cc-EEEeeccChhhHHHHHH
Q 018367 56 ILNNYYIPNYILVSGSE-VQ---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNE-NQ-VIDLGEKAPDKVLHQLY 129 (357)
Q Consensus 56 ~~~~~~~p~~~~~~~~~-~~---~~~~~~~~~vlvIvNP~SG~~~g~~~~~~~~~~L~~-~~-V~~l~~~~p~~~~~~~~ 129 (357)
+.+.|..|..++.-... .. ...... ++++||..+..- +.+.+++.+.|.. .. +|+.....|. .+.+.
T Consensus 24 m~~~f~~p~~i~~G~g~l~~l~~~l~~~g-~r~liVtd~~~~----~~~~~~v~~~L~~g~~~~~~~~~~~p~--~~~v~ 96 (387)
T 3uhj_A 24 MARAFGGPNKYIQRAGEIDKLAAYLAPLG-KRALVLIDRVLF----DALSERIGKSCGDSLDIRFERFGGECC--TSEIE 96 (387)
T ss_dssp CEEEEECCSEEEECTTTTTTTHHHHGGGC-SEEEEEECTTTH----HHHHHHC------CCEEEEEECCSSCS--HHHHH
T ss_pred hhhHhcCCCeEEEcCCHHHHHHHHHHHcC-CEEEEEECchHH----HHHHHHHHHHHHcCCCeEEEEcCCCCC--HHHHH
Confidence 45778889887765422 11 111123 788999886553 2356777777765 12 2332222222 12232
Q ss_pred HHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHHhCCCCCCCCEEEEeC
Q 018367 130 VTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL 184 (357)
Q Consensus 130 ~~l~~l~~~~~~lA~~~~~~~~VVv~GGDGTVneVln~L~~~~~~~~~plgIIP~ 184 (357)
+.++.+. + .+.+.||++|| |++..+...+.-. ..+|+..||-
T Consensus 97 ~~~~~~~--------~-~~~d~IIavGG-Gs~~D~AK~iA~~---~~~p~i~IPT 138 (387)
T 3uhj_A 97 RVRKVAI--------E-HGSDILVGVGG-GKTADTAKIVAID---TGARIVIAPT 138 (387)
T ss_dssp HHHHHHH--------H-HTCSEEEEESS-HHHHHHHHHHHHH---TTCEEEECCS
T ss_pred HHHHHHh--------h-cCCCEEEEeCC-cHHHHHHHHHHHh---cCCCEEEecC
Confidence 3332211 1 24578999999 9999888877642 3678888886
No 14
>1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} SCOP: e.22.1.2 PDB: 1vhd_A*
Probab=80.31 E-value=16 Score=35.12 Aligned_cols=117 Identities=23% Similarity=0.371 Sum_probs=60.1
Q ss_pred cccccCeEEecCCc----cccccCCCCCcEEEEEcCCCCCCChhhHHHHHHHhhccC--cE--EEeeccChhhHHHHHHH
Q 018367 59 NYYIPNYILVSGSE----VQRSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QV--IDLGEKAPDKVLHQLYV 130 (357)
Q Consensus 59 ~~~~p~~~~~~~~~----~~~~~~~~~~~vlvIvNP~SG~~~g~~~~~~~~~~L~~~--~V--~~l~~~~p~~~~~~~~~ 130 (357)
.|..|..++.-... ........ ++++|+..+.+-...+ +++++.+.|... .+ |+-.+..|. .+.+.+
T Consensus 15 ~~~~p~~i~~G~g~~~~l~~~l~~~g-~~~liVtd~~~~~~~g--~~~~v~~~L~~~g~~~~~~~~~~~~p~--~~~v~~ 89 (371)
T 1o2d_A 15 EFYMPTDVFFGEKILEKRGNIIDLLG-KRALVVTGKSSSKKNG--SLDDLKKLLDETEISYEIFDEVEENPS--FDNVMK 89 (371)
T ss_dssp CCCCCCEEEESTTHHHHHGGGGGGTC-SEEEEEEESSGGGTSS--HHHHHHHHHHHTTCEEEEEEEECSSCB--HHHHHH
T ss_pred EecCCceEEECcCHHHHHHHHHHHcC-CEEEEEECchHHhhcc--HHHHHHHHHHHcCCeEEEeCCccCCCC--HHHHHH
Confidence 35557666654321 11111122 7899999875432222 456666666432 22 321222222 222333
Q ss_pred HHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHHhCCCC---------------CCCCEEEEeC--CCCcch
Q 018367 131 TLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLP---------------HSPPVATVPL--GTGNNI 190 (357)
Q Consensus 131 ~l~~l~~~~~~lA~~~~~~~~VVv~GGDGTVneVln~L~~~~~~---------------~~~plgIIP~--GTGNDf 190 (357)
.++.+. + .+.+.||++|| |++..+...+.-.-.. ..+|+..||- |||-..
T Consensus 90 ~~~~~~--------~-~~~d~IIavGG-Gsv~D~AK~iA~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTTagtgse~ 156 (371)
T 1o2d_A 90 AVERYR--------N-DSFDFVVGLGG-GSPMDFAKAVAVLLKEKDLSVEDLYDREKVKHWLPVVEIPTTAGTGSEV 156 (371)
T ss_dssp HHHHHT--------T-SCCSEEEEEES-HHHHHHHHHHHHHTTSTTCCSGGGGCGGGCCCCCCEEEEECSSCCCGGG
T ss_pred HHHHHH--------h-cCCCEEEEeCC-hHHHHHHHHHHHHHhCCCCCHHHHhcccCCCCCCeEEEEeCCCchhhhh
Confidence 333221 1 24577899988 8888887766432111 5789999994 555544
No 15
>1oj7_A Hypothetical oxidoreductase YQHD; structural genomics; HET: NZQ; 2.0A {Escherichia coli} SCOP: e.22.1.2
Probab=78.88 E-value=11 Score=36.68 Aligned_cols=118 Identities=18% Similarity=0.200 Sum_probs=61.6
Q ss_pred ccccCeEEecCCc-cc---cccCCCCCcEEEEEcCCCCCCChhhHHHHHHHhhccCcEEEeeccChhhHHHHHHHHHHHh
Q 018367 60 YYIPNYILVSGSE-VQ---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKF 135 (357)
Q Consensus 60 ~~~p~~~~~~~~~-~~---~~~~~~~~~vlvIvNP~SG~~~g~~~~~~~~~~L~~~~V~~l~~~~p~~~~~~~~~~l~~l 135 (357)
|..|..++.-... .. ... .. ++++|+..+.+- ....+.+.+.+.|....+..+....|..-++.+.+.++.+
T Consensus 27 ~~~p~~i~~G~g~l~~l~~~l~-~g-~r~liVtd~~~~--~~~g~~~~v~~~L~g~~~~~f~~v~~~p~~~~v~~~~~~~ 102 (408)
T 1oj7_A 27 LHTPTRILFGKGAIAGLREQIP-HD-ARVLITYGGGSV--KKTGVLDQVLDALKGMDVLEFGGIEPNPAYETLMNAVKLV 102 (408)
T ss_dssp EEEEEEEEESTTGGGGHHHHSC-TT-CEEEEEECSSHH--HHHSHHHHHHHHTTTSEEEEECCCCSSCBHHHHHHHHHHH
T ss_pred ecCCCeEEECCCHHHHHHHHHh-cC-CEEEEEECCchh--hhccHHHHHHHHhCCCEEEEeCCcCCCcCHHHHHHHHHHH
Confidence 5567766654321 11 111 22 788888865421 1112567777777533333233222222222233333322
Q ss_pred hhccchhhhhhccCcEEEEEcCchHHHHHHHHHHhC--C----------------CCCCCCEEEEeC--CCCcchh
Q 018367 136 KAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDL--K----------------LPHSPPVATVPL--GTGNNIP 191 (357)
Q Consensus 136 ~~~~~~lA~~~~~~~~VVv~GGDGTVneVln~L~~~--~----------------~~~~~plgIIP~--GTGNDfA 191 (357)
.+ .+.+.||++|| |++..+...+.-. . ....+|+..||- |||-...
T Consensus 103 ~~---------~~~D~IIavGG-GsviD~AK~iA~~~~~~~~~~~~d~~~~~~~~~~~~~p~i~IPTTagtgSevt 168 (408)
T 1oj7_A 103 RE---------QKVTFLLAVGG-GSVLDGTKFIAAAANYPENIDPWHILQTGGKEIKSAIPMGCVLTLPATGSESN 168 (408)
T ss_dssp HH---------HTCCEEEEEES-HHHHHHHHHHHHHTTSCTTSCTTHHHHTTTTTCCCCCCEEEEESSCSSCGGGS
T ss_pred HH---------cCCCEEEEeCC-chHHHHHHHHHHHHhCCCCCCHHHHhccccCcCCCCCCEEEEeCCCchhHHhC
Confidence 11 24578999998 8888887766431 0 115689999996 6765544
No 16
>2gru_A 2-deoxy-scyllo-inosose synthase; aminoglycoside, 2-deoxystreptamine, dehydroquinate synthase, lyase; HET: NAD EXO CAK; 2.15A {Bacillus circulans} PDB: 2d2x_A*
Probab=76.76 E-value=5.8 Score=38.24 Aligned_cols=92 Identities=16% Similarity=0.217 Sum_probs=52.2
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHhhccC-cE--EEeeccChhhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 018367 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNEN-QV--IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 157 (357)
Q Consensus 81 ~~~vlvIvNP~SG~~~g~~~~~~~~~~L~~~-~V--~~l~~~~p~~~~~~~~~~l~~l~~~~~~lA~~~~~~~~VVv~GG 157 (357)
.++++|+.++.... .+.+.+.+.|... .+ +.+....+..-++.+.+.++.+.+.+ ..+.+.||++||
T Consensus 34 ~~k~liVtd~~v~~----~~~~~v~~~L~~~~~~~~~~~~~ge~~k~~~~v~~~~~~~~~~~------~~r~d~iIalGG 103 (368)
T 2gru_A 34 FDQYIMISDSGVPD----SIVHYAAEYFGKLAPVHILRFQGGEEYKTLSTVTNLQERAIALG------ANRRTAIVAVGG 103 (368)
T ss_dssp CSEEEEEEETTSCH----HHHHHHHHHHTTTSCEEEEEECCSGGGCSHHHHHHHHHHHHHTT------CCTTEEEEEEES
T ss_pred CCEEEEEECCcHHH----HHHHHHHHHHHhccceeEEEeCCCCCCCCHHHHHHHHHHHHhcC------CCCCcEEEEECC
Confidence 47899999976642 2567777777543 32 22222222222333333333222111 123467888888
Q ss_pred chHHHHHHHHHHhCCCCCCCCEEEEeC
Q 018367 158 DGTASWLLGVVSDLKLPHSPPVATVPL 184 (357)
Q Consensus 158 DGTVneVln~L~~~~~~~~~plgIIP~ 184 (357)
|++..+...+... ....+|+..||-
T Consensus 104 -Gsv~D~ak~~Aa~-~~rgip~i~IPT 128 (368)
T 2gru_A 104 -GLTGNVAGVAAGM-MFRGIALIHVPT 128 (368)
T ss_dssp -HHHHHHHHHHHHH-BTTCCEEEEEEC
T ss_pred -hHHHHHHHHHHHH-hcCCCCEEEECC
Confidence 8999988877632 124689999998
No 17
>3okf_A 3-dehydroquinate synthase; structural genomics, center for structural genomics of infec diseases, csgid, NAD, lyase; HET: NAD; 2.50A {Vibrio cholerae o1 biovar eltor}
Probab=75.67 E-value=6.8 Score=38.42 Aligned_cols=93 Identities=17% Similarity=0.227 Sum_probs=51.6
Q ss_pred CCCcEEEEEcCCCCCCChhhHHHHHHHhhccC--cE--EEeeccChhhHHHHHHHHHHHhhhccchhhhhhccCcEEEEE
Q 018367 80 PSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QV--IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVA 155 (357)
Q Consensus 80 ~~~~vlvIvNP~SG~~~g~~~~~~~~~~L~~~--~V--~~l~~~~p~~~~~~~~~~l~~l~~~~~~lA~~~~~~~~VVv~ 155 (357)
..++++|+.++... ..+.+++.+.|... .+ +.+....+...++.+.+.++.+.+.+ ..+.+.||++
T Consensus 61 ~~~rvlIVtd~~v~----~~~~~~v~~~L~~~g~~~~~~~~~~gE~~kt~~~v~~~~~~l~~~~------~~R~d~IIAv 130 (390)
T 3okf_A 61 AKQKVVIVTNHTVA----PLYAPAIISLLDHIGCQHALLELPDGEQYKTLETFNTVMSFLLEHN------YSRDVVVIAL 130 (390)
T ss_dssp TTCEEEEEEETTTH----HHHHHHHHHHHHHHTCEEEEEEECSSGGGCBHHHHHHHHHHHHHTT------CCTTCEEEEE
T ss_pred CCCEEEEEECCcHH----HHHHHHHHHHHHHcCCeEEEEEECCCcCCchHHHHHHHHHHHHhcC------CCcCcEEEEE
Confidence 45789999987654 23667777777542 22 22322122122222333333222111 1233578888
Q ss_pred cCchHHHHHHHHHHhCCCCCCCCEEEEeC
Q 018367 156 GGDGTASWLLGVVSDLKLPHSPPVATVPL 184 (357)
Q Consensus 156 GGDGTVneVln~L~~~~~~~~~plgIIP~ 184 (357)
|| |++..+...+... ....+|+..||-
T Consensus 131 GG-Gsv~D~ak~~Aa~-~~rgip~I~IPT 157 (390)
T 3okf_A 131 GG-GVIGDLVGFAAAC-YQRGVDFIQIPT 157 (390)
T ss_dssp ES-HHHHHHHHHHHHH-BTTCCEEEEEEC
T ss_pred CC-cHHhhHHHHHHHH-hcCCCCEEEeCC
Confidence 88 8898888776421 125788999997
No 18
>3iv7_A Alcohol dehydrogenase IV; NP_602249.1, iron-containing alcohol dehydrogenase, structur genomics, joint center for structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=75.60 E-value=6.5 Score=37.98 Aligned_cols=84 Identities=14% Similarity=0.098 Sum_probs=49.1
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHhhccCcEEEeeccChhhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchH
Q 018367 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGT 160 (357)
Q Consensus 81 ~~~vlvIvNP~SG~~~g~~~~~~~~~~L~~~~V~~l~~~~p~~~~~~~~~~l~~l~~~~~~lA~~~~~~~~VVv~GGDGT 160 (357)
.++++|+..+.. ..+.+++.+.|....+|+-....|. .+.+.+.++.+++ .+.+.||++|| |+
T Consensus 37 ~~rvliVtd~~~-----~~~~~~v~~~L~~~~~f~~v~~~p~--~~~v~~~~~~~~~---------~~~D~IIavGG-Gs 99 (364)
T 3iv7_A 37 SAKVMVIAGERE-----MSIAHKVASEIEVAIWHDEVVMHVP--IEVAERARAVATD---------NEIDLLVCVGG-GS 99 (364)
T ss_dssp CSSEEEECCGGG-----HHHHHHHTTTSCCSEEECCCCTTCB--HHHHHHHHHHHHH---------TTCCEEEEEES-HH
T ss_pred CCEEEEEECCCH-----HHHHHHHHHHcCCCEEEcceecCCC--HHHHHHHHHHHHh---------cCCCEEEEeCC-cH
Confidence 467888877642 2356777777764434432222222 2223333332211 24578999999 99
Q ss_pred HHHHHHHHHhCCCCCCCCEEEEeC
Q 018367 161 ASWLLGVVSDLKLPHSPPVATVPL 184 (357)
Q Consensus 161 VneVln~L~~~~~~~~~plgIIP~ 184 (357)
+..+...+.-. ..+|+..||-
T Consensus 100 ~iD~aK~iA~~---~~~P~i~IPT 120 (364)
T 3iv7_A 100 TIGLAKAIAMT---TALPIVAIPT 120 (364)
T ss_dssp HHHHHHHHHHH---HCCCEEEEEC
T ss_pred HHHHHHHHHhc---cCCCEEEEcC
Confidence 98888777542 3678999995
No 19
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=74.26 E-value=9.7 Score=36.84 Aligned_cols=117 Identities=15% Similarity=0.154 Sum_probs=62.1
Q ss_pred cccccCeEEecCCc----cccccCCCCCcEEEEEcCCCCCCChhhHHHHHHHhhccCc--E--EEeeccChhhHHHHHHH
Q 018367 59 NYYIPNYILVSGSE----VQRSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--V--IDLGEKAPDKVLHQLYV 130 (357)
Q Consensus 59 ~~~~p~~~~~~~~~----~~~~~~~~~~~vlvIvNP~SG~~~g~~~~~~~~~~L~~~~--V--~~l~~~~p~~~~~~~~~ 130 (357)
.|..|..++.-... .........++++|+..+.- ....+.+++.+.|.... + |+-.+..|. .+.+.+
T Consensus 5 ~f~~p~~i~~G~g~~~~l~~~~~~~g~~~~liVtd~~~---~~~g~~~~v~~~L~~~gi~~~~~~~v~~~p~--~~~v~~ 79 (383)
T 3ox4_A 5 TFYIPFVNEMGEGSLEKAIKDLNGSGFKNALIVSDAFM---NKSGVVKQVADLLKAQGINSAVYDGVMPNPT--VTAVLE 79 (383)
T ss_dssp EEECCSEEEESTTHHHHHHHTTTTSCCCEEEEEEEHHH---HHTTHHHHHHHHHHTTTCEEEEEEEECSSCB--HHHHHH
T ss_pred eecCCCeEEECCCHHHHHHHHHHHcCCCEEEEEECCch---hhCchHHHHHHHHHHcCCeEEEECCccCCCC--HHHHHH
Confidence 46778887664422 11122223478888887521 11125677777776433 2 322222222 222333
Q ss_pred HHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHHhC---C------------CCCCCCEEEEeC--CCCcch
Q 018367 131 TLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDL---K------------LPHSPPVATVPL--GTGNNI 190 (357)
Q Consensus 131 ~l~~l~~~~~~lA~~~~~~~~VVv~GGDGTVneVln~L~~~---~------------~~~~~plgIIP~--GTGNDf 190 (357)
.++.+.+ .+.+.||++|| |++..+...+.-. . ....+|+..||- |||-..
T Consensus 80 ~~~~~~~---------~~~D~IIavGG-Gsv~D~aK~ia~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTTagtgSe~ 146 (383)
T 3ox4_A 80 GLKILKD---------NNSDFVISLGG-GSPHDCAKAIALVATNGGEVKDYEGIDKSKKPALPLMSINTTAGTASEM 146 (383)
T ss_dssp HHHHHHH---------HTCSEEEEEES-HHHHHHHHHHHHHHHSCSSGGGGCEESCCSSCCSCEEEEECSSSCCTTT
T ss_pred HHHHHHh---------cCcCEEEEeCC-cHHHHHHHHHHHHHhCCCCHHHHhcccccccCCCCEEEEeCCCCchhhc
Confidence 3332211 24578999999 8888887665321 0 024689999996 555433
No 20
>3qbe_A 3-dehydroquinate synthase; shikimate pathway, mycobacte tuberculosis, nicotinamide adenine dinucleotide (NAD)-depen enzyme; 2.07A {Mycobacterium tuberculosis} PDB: 3qbd_A
Probab=69.74 E-value=8 Score=37.57 Aligned_cols=90 Identities=19% Similarity=0.216 Sum_probs=49.4
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHhhccCc--E--EEeeccChhhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 018367 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--V--IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 157 (357)
Q Consensus 82 ~~vlvIvNP~SG~~~g~~~~~~~~~~L~~~~--V--~~l~~~~p~~~~~~~~~~l~~l~~~~~~lA~~~~~~~~VVv~GG 157 (357)
++++|+.++.... +.+.+.+.|.... + +.+....+..-++.+.+.++.+.+.+ ..+.+.||++||
T Consensus 44 ~rvlIVtd~~v~~-----~~~~v~~~L~~~g~~~~~~~~~~gE~~kt~~~v~~~~~~l~~~~------~~r~d~IIavGG 112 (368)
T 3qbe_A 44 HKVAVVHQPGLAE-----TAEEIRKRLAGKGVDAHRIEIPDAEAGKDLPVVGFIWEVLGRIG------IGRKDALVSLGG 112 (368)
T ss_dssp SEEEEEECGGGHH-----HHHHHHHHHHHTTCEEEEEECCSGGGGGBHHHHHHHHHHHHHHT------CCTTCEEEEEES
T ss_pred CEEEEEECccHHH-----HHHHHHHHHHhcCCcceEEEeCCCCCCCCHHHHHHHHHHHHHcC------CCCCcEEEEECC
Confidence 7899999876532 3566666665432 2 22222222222222333333221111 123467889988
Q ss_pred chHHHHHHHHHHhCCCCCCCCEEEEeC
Q 018367 158 DGTASWLLGVVSDLKLPHSPPVATVPL 184 (357)
Q Consensus 158 DGTVneVln~L~~~~~~~~~plgIIP~ 184 (357)
|++..+...+... ....+|+..||-
T Consensus 113 -Gsv~D~ak~~Aa~-~~rgip~i~IPT 137 (368)
T 3qbe_A 113 -GAATDVAGFAAAT-WLRGVSIVHLPT 137 (368)
T ss_dssp -HHHHHHHHHHHHH-GGGCCEEEEEEC
T ss_pred -hHHHHHHHHHHHH-hccCCcEEEECC
Confidence 8888888776531 124688888995
No 21
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A
Probab=68.56 E-value=11 Score=35.86 Aligned_cols=37 Identities=27% Similarity=0.425 Sum_probs=29.7
Q ss_pred cEEEEEcCchHHHHHHHHHHhCCCCCCCCEEEEeCCCCcchh
Q 018367 150 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIP 191 (357)
Q Consensus 150 ~~VVv~GGDGTVneVln~L~~~~~~~~~plgIIP~GTGNDfA 191 (357)
+.+|++|||||..-+. .|.+. .+|+--||-===||++
T Consensus 96 d~LvvIGGdgS~~~a~-~L~~~----~i~vvgiPkTIDNDl~ 132 (320)
T 1pfk_A 96 DALVVIGGDGSYMGAM-RLTEM----GFPCIGLPGTIDNDIK 132 (320)
T ss_dssp CEEEEEECHHHHHHHH-HHHHT----TCCEEEEEBCTTCCCT
T ss_pred CEEEEECCCchHHHHH-HHHhh----CCCEEEEeccccCCCC
Confidence 5799999999987654 45543 6788889999999997
No 22
>1jq5_A Glycerol dehydrogenase; oxidoreductase, NAD, glycerol metabolism; HET: NAD; 1.70A {Geobacillus stearothermophilus} SCOP: e.22.1.2 PDB: 1jpu_A* 1jqa_A*
Probab=68.55 E-value=14 Score=35.31 Aligned_cols=110 Identities=14% Similarity=0.037 Sum_probs=59.4
Q ss_pred ccccccCeEEecCCc-cc---cccCCCCCcEEEEEcCCCCCCChhhHHHHHHHhhccCc--E-EEeec-cChhhHHHHHH
Q 018367 58 NNYYIPNYILVSGSE-VQ---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--V-IDLGE-KAPDKVLHQLY 129 (357)
Q Consensus 58 ~~~~~p~~~~~~~~~-~~---~~~~~~~~~vlvIvNP~SG~~~g~~~~~~~~~~L~~~~--V-~~l~~-~~p~~~~~~~~ 129 (357)
+.|..|..++.-... .. ...... ++++|+..+.+-. .+.+.+...|.... + +.+.. +.+.+.++
T Consensus 5 ~~~~~p~~i~~G~g~~~~l~~~l~~~g-~~~livtd~~~~~----~~~~~v~~~L~~~g~~~~~~~~~ge~~~~~v~--- 76 (370)
T 1jq5_A 5 RVFISPAKYVQGKNVITKIANYLEGIG-NKTVVIADEIVWK----IAGHTIVNELKKGNIAAEEVVFSGEASRNEVE--- 76 (370)
T ss_dssp BCCCCCSEEEEETTGGGGHHHHHTTTC-SEEEEEECHHHHH----HTHHHHHHHHHTTTCEEEEEECCSSCBHHHHH---
T ss_pred eEecCCCeEEECcCHHHHHHHHHHHcC-CeEEEEEChHHHH----HHHHHHHHHHHHcCCeEEEEeeCCCCCHHHHH---
Confidence 457778876654321 11 111223 7899998765432 24566677665432 2 22222 22222222
Q ss_pred HHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHHhCCCCCCCCEEEEeC--CCCc
Q 018367 130 VTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL--GTGN 188 (357)
Q Consensus 130 ~~l~~l~~~~~~lA~~~~~~~~VVv~GGDGTVneVln~L~~~~~~~~~plgIIP~--GTGN 188 (357)
+.++.+. + .+.+.||++|| |++..+...+.-. ..+|+..||- |||-
T Consensus 77 ~~~~~~~--------~-~~~d~IIavGG-Gsv~D~aK~iA~~---~~~p~i~IPTTa~tgS 124 (370)
T 1jq5_A 77 RIANIAR--------K-AEAAIVIGVGG-GKTLDTAKAVADE---LDAYIVIVPTAASTDA 124 (370)
T ss_dssp HHHHHHH--------H-TTCSEEEEEES-HHHHHHHHHHHHH---HTCEEEEEESSCCSSC
T ss_pred HHHHHHH--------h-cCCCEEEEeCC-hHHHHHHHHHHHh---cCCCEEEeccccCCCc
Confidence 2222211 1 23577999998 8888888777532 3578888885 4443
No 23
>3clh_A 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, DHQS, amino-acid biosynthesis, cytoplasm, lyase, NAD; HET: NAD; 2.40A {Helicobacter pylori}
Probab=63.55 E-value=5.7 Score=37.89 Aligned_cols=91 Identities=20% Similarity=0.209 Sum_probs=50.3
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHhhccCcE--EEeeccChhhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCc
Q 018367 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV--IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGD 158 (357)
Q Consensus 81 ~~~vlvIvNP~SG~~~g~~~~~~~~~~L~~~~V--~~l~~~~p~~~~~~~~~~l~~l~~~~~~lA~~~~~~~~VVv~GGD 158 (357)
.++++|+.++..... +.+.+.+.|....+ +.+....+..-++.+.+.++.+.+.+ ....+.||++||
T Consensus 26 ~~~~livtd~~v~~~----~~~~v~~~L~~~~~~~~~~~~~e~~k~~~~v~~~~~~~~~~~------~~r~d~iIavGG- 94 (343)
T 3clh_A 26 KQKALIISDSIVAGL----HLPYLLERLKALEVRVCVIESGEKYKNFHSLERILNNAFEMQ------LNRHSLMIALGG- 94 (343)
T ss_dssp SSCEEEEEEHHHHTT----THHHHHTTEECSCEEEEEECSSGGGCSHHHHHHHHHHHHHTT------CCTTCEEEEEES-
T ss_pred CCEEEEEECCcHHHH----HHHHHHHHHHhCCcEEEEeCCCCCCCCHHHHHHHHHHHHhcC------CCCCceEEEECC-
Confidence 478999988655322 46777777754333 22322222212222333333222111 123367888888
Q ss_pred hHHHHHHHHHHhCCCCCCCCEEEEe
Q 018367 159 GTASWLLGVVSDLKLPHSPPVATVP 183 (357)
Q Consensus 159 GTVneVln~L~~~~~~~~~plgIIP 183 (357)
|++..+...+... ....+|+..||
T Consensus 95 Gsv~D~ak~~A~~-~~rgip~i~IP 118 (343)
T 3clh_A 95 GVISDMVGFASSI-YFRGIDFINIP 118 (343)
T ss_dssp HHHHHHHHHHHHH-BTTCCEEEEEE
T ss_pred hHHHHHHHHHHHH-hccCCCEEEeC
Confidence 8888888776521 12578899999
No 24
>1ujn_A Dehydroquinate synthase; riken structu genomics/proteomics initiative, RSGI, structural genomics,; 1.80A {Thermus thermophilus} SCOP: e.22.1.1
Probab=62.75 E-value=14 Score=35.18 Aligned_cols=90 Identities=20% Similarity=0.268 Sum_probs=50.0
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHhhccCcE-EEeeccChhhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCch
Q 018367 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDG 159 (357)
Q Consensus 81 ~~~vlvIvNP~SG~~~g~~~~~~~~~~L~~~~V-~~l~~~~p~~~~~~~~~~l~~l~~~~~~lA~~~~~~~~VVv~GGDG 159 (357)
.++++|+.++... + +.+.+.+.|. ..+ +.+....+...++.+.+.++.+.+.+ ..+.+.||++|| |
T Consensus 28 ~~kvliVtd~~v~----~-~~~~v~~~L~-~~~~~~~~~ge~~~~~~~v~~~~~~~~~~~------~~r~d~IIavGG-G 94 (348)
T 1ujn_A 28 AGPAALLFDRRVE----G-FAQEVAKALG-VRHLLGLPGGEAAKSLEVYGKVLSWLAEKG------LPRNATLLVVGG-G 94 (348)
T ss_dssp SSCEEEEEEGGGH----H-HHHHHHHHHT-CCCEEEECCSGGGSSHHHHHHHHHHHHHHT------CCTTCEEEEEES-H
T ss_pred CCEEEEEECCcHH----H-HHHHHHHHhc-cCeEEEECCCCCCCCHHHHHHHHHHHHHcC------CCCCCEEEEECC-c
Confidence 4789999986442 3 6677777775 222 22322122222222333332221111 123467888888 8
Q ss_pred HHHHHHHHHHhCCCCCCCCEEEEeC
Q 018367 160 TASWLLGVVSDLKLPHSPPVATVPL 184 (357)
Q Consensus 160 TVneVln~L~~~~~~~~~plgIIP~ 184 (357)
++..+...+... ....+|+..||-
T Consensus 95 sv~D~ak~~A~~-~~rgip~i~IPT 118 (348)
T 1ujn_A 95 TLTDLGGFVAAT-YLRGVAYLAFPT 118 (348)
T ss_dssp HHHHHHHHHHHH-BTTCCEEEEEEC
T ss_pred HHHHHHHHHHHH-hccCCCEEEecC
Confidence 888888777631 124688999996
No 25
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp}
Probab=60.98 E-value=12 Score=35.64 Aligned_cols=37 Identities=27% Similarity=0.350 Sum_probs=29.4
Q ss_pred cEEEEEcCchHHHHHHHHHHhCCCCCCCCEEEEeCCCCcchh
Q 018367 150 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIP 191 (357)
Q Consensus 150 ~~VVv~GGDGTVneVln~L~~~~~~~~~plgIIP~GTGNDfA 191 (357)
+.+|++|||||..-+. .|.+. .+++--||-===||++
T Consensus 95 d~LvvIGGdgS~~~a~-~L~~~----~i~vvgiPkTIDNDl~ 131 (319)
T 1zxx_A 95 DAVVVIGGDGSYHGAL-QLTRH----GFNSIGLPGTIDNDIP 131 (319)
T ss_dssp CEEEEEECHHHHHHHH-HHHHT----TCCEEEEEEETTCCCT
T ss_pred CEEEEECCchHHHHHH-HHHHh----CCCEEEEeecccCCCC
Confidence 5799999999987654 34442 5788889999999997
No 26
>2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A*
Probab=58.82 E-value=14 Score=37.42 Aligned_cols=41 Identities=27% Similarity=0.238 Sum_probs=29.9
Q ss_pred CcEEEEEcCchHHHHHH---HHHHhCCCCCCCCEEEEeCCCCcchh
Q 018367 149 RLRLIVAGGDGTASWLL---GVVSDLKLPHSPPVATVPLGTGNNIP 191 (357)
Q Consensus 149 ~~~VVv~GGDGTVneVl---n~L~~~~~~~~~plgIIP~GTGNDfA 191 (357)
-+.+|++|||||..-+. +.+.+. ...+++--||-===||+.
T Consensus 190 Id~LvvIGGdgS~~~A~~L~e~~~~~--g~~i~vVGIPkTIDNDl~ 233 (487)
T 2hig_A 190 VNILFTVGGDGTQRGALVISQEAKRR--GVDISVFGVPKTIDNDLS 233 (487)
T ss_dssp CSEEEEEECHHHHHHHHHHHHHHHHH--TCCCEEEEEECCTTSSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHHHh--CCCceEEeccccccCCCC
Confidence 35799999999988543 222222 235789999999999996
No 27
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=57.56 E-value=37 Score=32.88 Aligned_cols=120 Identities=18% Similarity=0.171 Sum_probs=60.0
Q ss_pred ccccCeEEecCCc-ccc---ccCCCCCcEEEEEcCCCCCCChhhHHHHHHHhhccCc--EEEeeccChhhHHHHHHHHHH
Q 018367 60 YYIPNYILVSGSE-VQR---SSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--VIDLGEKAPDKVLHQLYVTLE 133 (357)
Q Consensus 60 ~~~p~~~~~~~~~-~~~---~~~~~~~~vlvIvNP~SG~~~g~~~~~~~~~~L~~~~--V~~l~~~~p~~~~~~~~~~l~ 133 (357)
|..|..++.-... ..+ ......++++|+..+.+-.. ..+.+++.+.|.... +..+....|..-.+.+.+.++
T Consensus 18 ~~~p~~i~~G~g~l~~l~~~l~~~g~~r~liVtd~~~~~~--~g~~~~v~~~L~~~g~~~~~f~~v~~~p~~~~v~~~~~ 95 (407)
T 1vlj_A 18 FHNPTKIVFGRGTIPKIGEEIKNAGIRKVLFLYGGGSIKK--NGVYDQVVDSLKKHGIEWVEVSGVKPNPVLSKVHEAVE 95 (407)
T ss_dssp ECCCCEEEESTTCGGGHHHHHHHTTCCEEEEEECSSHHHH--SSHHHHHHHHHHHTTCEEEEECCCCSSCBHHHHHHHHH
T ss_pred EecCCeEEECcCHHHHHHHHHHHcCCCeEEEEECchHHhh--ccHHHHHHHHHHHcCCeEEEecCccCCCCHHHHHHHHH
Confidence 5568776654321 111 11122368888886432111 115666666665432 222222122212222333333
Q ss_pred HhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHHhCC---------------CCCCCCEEEEeC--CCCcchh
Q 018367 134 KFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLK---------------LPHSPPVATVPL--GTGNNIP 191 (357)
Q Consensus 134 ~l~~~~~~lA~~~~~~~~VVv~GGDGTVneVln~L~~~~---------------~~~~~plgIIP~--GTGNDfA 191 (357)
.+.+ .+.+.||++|| |++..+...+.-.- ....+|+..||- |||--..
T Consensus 96 ~~~~---------~~~D~IIavGG-GsviD~AK~iA~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTTagtgSevt 160 (407)
T 1vlj_A 96 VAKK---------EKVEAVLGVGG-GSVVDSAKAVAAGALYEGDIWDAFIGKYQIEKALPIFDVLTISATGTEMN 160 (407)
T ss_dssp HHHH---------TTCSEEEEEES-HHHHHHHHHHHHHTTCSSCGGGGGGTSCCCCCCCCEEEEECSCSSCGGGS
T ss_pred HHHh---------cCCCEEEEeCC-hhHHHHHHHHHHHHhCCCCHHHHhcccccCCCCCCEEEEeCCCCcchhhc
Confidence 2211 24577999988 88888877664310 125789999995 5654443
No 28
>1sg6_A Pentafunctional AROM polypeptide; shikimate pathway, aromatic amino acid biosynthesis, DHQS, O form J, domain movement, cyclase, lyase; HET: NAD; 1.70A {Emericella nidulans} SCOP: e.22.1.1 PDB: 1nr5_A* 1nrx_A* 1nua_A 1nva_A* 1nvb_A* 1nvd_A* 1nve_A* 1nvf_A* 1dqs_A*
Probab=56.80 E-value=6.3 Score=38.36 Aligned_cols=40 Identities=23% Similarity=0.207 Sum_probs=30.1
Q ss_pred cEEEEEcCchHHHHHHHHHHhCCCCCCCCEEEEeC--CCCcchh
Q 018367 150 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL--GTGNNIP 191 (357)
Q Consensus 150 ~~VVv~GGDGTVneVln~L~~~~~~~~~plgIIP~--GTGNDfA 191 (357)
+.||++|| |++..+...+... ....+|+..||- ||+.|-+
T Consensus 107 d~iIalGG-Gsv~D~ak~~Aa~-~~rgip~i~IPTTlla~~das 148 (393)
T 1sg6_A 107 TVVIALGG-GVIGDLTGFVAST-YMRGVRYVQVPTTLLAMVDSS 148 (393)
T ss_dssp CEEEEEES-HHHHHHHHHHHHH-GGGCCEEEEEECSHHHHHTTT
T ss_pred CEEEEECC-cHHHHHHHHHHHH-hcCCCCEEEECCchhhhhhcC
Confidence 67888888 8888888776531 124689999998 7887774
No 29
>1ta9_A Glycerol dehydrogenase; oxidoredu; 1.90A {Schizosaccharomyces pombe}
Probab=55.81 E-value=22 Score=35.34 Aligned_cols=111 Identities=12% Similarity=0.014 Sum_probs=61.4
Q ss_pred cccccccccccCeEEecCCc-cc---cccCCCCCcEEEEEcCCCCCCChhhHHHHHHHhhccCc--E-EEeec-cChhhH
Q 018367 53 KSKILNNYYIPNYILVSGSE-VQ---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--V-IDLGE-KAPDKV 124 (357)
Q Consensus 53 ~~~~~~~~~~p~~~~~~~~~-~~---~~~~~~~~~vlvIvNP~SG~~~g~~~~~~~~~~L~~~~--V-~~l~~-~~p~~~ 124 (357)
.+.+.+.|..|..++.-... .. .......++++|+..+.+-. .+.+.+.+.|.... + +.+.. +.+.+.
T Consensus 59 ~~~~~~~f~~p~~i~~G~g~l~~l~~~l~~~g~~rvlIVtd~~~~~----~~~~~v~~~L~~~gi~~~~~~~~ge~~~~~ 134 (450)
T 1ta9_A 59 EESKDRIFTSPQKYVQGRHAFTRSYMYVKKWATKSAVVLADQNVWN----ICANKIVDSLSQNGMTVTKLVFGGEASLVE 134 (450)
T ss_dssp CCCSSEEEECCSEEEEETTGGGGHHHHHTTTCSSEEEEEEEHHHHH----HTHHHHHHHHHHTTCEEEEEEECSCCCHHH
T ss_pred cCccceEEeCCceEEECcCHHHHHHHHHHhcCCCEEEEEECccHHH----HHHHHHHHHHHHCCCeEEEEeeCCCCCHHH
Confidence 45556778888877654321 11 11122334899998765432 24566666665332 2 22222 222222
Q ss_pred HHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHHhCCCCCCCCEEEEeC
Q 018367 125 LHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL 184 (357)
Q Consensus 125 ~~~~~~~l~~l~~~~~~lA~~~~~~~~VVv~GGDGTVneVln~L~~~~~~~~~plgIIP~ 184 (357)
+.+.++ ++++ +.+.||++|| |++..+...+.-. ..+|+..||-
T Consensus 135 ---v~~~~~--------~~~~--~~D~IIAvGG-GSviD~AK~iA~~---~giP~I~IPT 177 (450)
T 1ta9_A 135 ---LDKLRK--------QCPD--DTQVIIGVGG-GKTMDSAKYIAHS---MNLPSIICPT 177 (450)
T ss_dssp ---HHHHHT--------TSCT--TCCEEEEEES-HHHHHHHHHHHHH---TTCCEEEEES
T ss_pred ---HHHHHH--------HHhh--CCCEEEEeCC-cHHHHHHHHHHHh---cCCCEEEEeC
Confidence 222221 2222 4567889988 8898888877642 4688999995
No 30
>3ce9_A Glycerol dehydrogenase; NP_348253.1, 3-dehydroquinate syntha structural genomics, joint center for structural genomics; HET: MSE; 2.37A {Clostridium acetobutylicum atcc 824}
Probab=55.33 E-value=20 Score=34.02 Aligned_cols=107 Identities=16% Similarity=0.071 Sum_probs=57.5
Q ss_pred cccccCeEEecCC-ccc---cccCCCCCcEEEEEcCCCCCCChhhHHHHHHHhhccC--cE--EEeeccChhhHHHHHHH
Q 018367 59 NYYIPNYILVSGS-EVQ---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QV--IDLGEKAPDKVLHQLYV 130 (357)
Q Consensus 59 ~~~~p~~~~~~~~-~~~---~~~~~~~~~vlvIvNP~SG~~~g~~~~~~~~~~L~~~--~V--~~l~~~~p~~~~~~~~~ 130 (357)
.|..|..++.-.. ... .......++++|+..+..-. .+.+.+.+.|... .+ |.. ...| -.+.+.+
T Consensus 8 ~~~~p~~i~~G~g~~~~l~~~l~~~g~~~~livtd~~~~~----~~~~~v~~~L~~~g~~~~~~~~-~~~~--~~~~v~~ 80 (354)
T 3ce9_A 8 RIAIPLILEVGNNKIYNIGQIIKKGNFKRVSLYFGEGIYE----LFGETIEKSIKSSNIEIEAVET-VKNI--DFDEIGT 80 (354)
T ss_dssp CCCCCSEEEEESSCGGGHHHHHGGGTCSEEEEEEETTHHH----HHHHHHHHHHHTTTCEEEEEEE-ECCC--BHHHHHH
T ss_pred EEeCCcEEEECCCHHHHHHHHHHhcCCCeEEEEECccHHH----HHHHHHHHHHHHcCCeEEEEec-CCCC--CHHHHHH
Confidence 4566776665432 111 11112236899998865432 3556777777543 23 331 2222 1222222
Q ss_pred HHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHHhCCCCCCCCEEEEeCCC
Q 018367 131 TLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGT 186 (357)
Q Consensus 131 ~l~~l~~~~~~lA~~~~~~~~VVv~GGDGTVneVln~L~~~~~~~~~plgIIP~GT 186 (357)
. +.+ ++ .+.+.||++|| |++..+...+.-. ..+|+..||-=.
T Consensus 81 ~-~~~--------~~-~~~d~IIavGG-Gsv~D~aK~vA~~---~~~p~i~IPTT~ 122 (354)
T 3ce9_A 81 N-AFK--------IP-AEVDALIGIGG-GKAIDAVKYMAFL---RKLPFISVPTST 122 (354)
T ss_dssp H-HTT--------SC-TTCCEEEEEES-HHHHHHHHHHHHH---HTCCEEEEESCC
T ss_pred H-HHh--------hh-cCCCEEEEECC-hHHHHHHHHHHhh---cCCCEEEecCcc
Confidence 2 221 11 24467888888 8888888777532 468899999633
No 31
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A*
Probab=55.14 E-value=20 Score=34.06 Aligned_cols=38 Identities=32% Similarity=0.412 Sum_probs=29.7
Q ss_pred CcEEEEEcCchHHHHHHHHHHhCCCCCCCCEEEEeCCCCcchh
Q 018367 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIP 191 (357)
Q Consensus 149 ~~~VVv~GGDGTVneVln~L~~~~~~~~~plgIIP~GTGNDfA 191 (357)
-+.++++|||||..-+. .+.+. .+|+--||-===||+.
T Consensus 94 Id~L~~IGGdgS~~~a~-~l~~~----~i~vigiPkTIDNDl~ 131 (319)
T 4a3s_A 94 IEGLVVIGGDGSYMGAK-KLTEH----GFPCVGVPGTIDNDIP 131 (319)
T ss_dssp CCEEEEEECTTHHHHHH-HHHHT----TCCEEEEEEETTCCCT
T ss_pred CCEEEEeCCcHHHHHHH-HHhcc----CCcEEEeeccccCCCC
Confidence 35799999999987654 45543 5788889998899996
No 32
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=54.77 E-value=76 Score=30.27 Aligned_cols=121 Identities=17% Similarity=0.208 Sum_probs=59.8
Q ss_pred cccccCeEEecCCc-cc---cccCCCCCcEEEEEcCCCCCCChhhHHHHHHHhhccC--cEEEeeccChhhHHHHHHHHH
Q 018367 59 NYYIPNYILVSGSE-VQ---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QVIDLGEKAPDKVLHQLYVTL 132 (357)
Q Consensus 59 ~~~~p~~~~~~~~~-~~---~~~~~~~~~vlvIvNP~SG~~~g~~~~~~~~~~L~~~--~V~~l~~~~p~~~~~~~~~~l 132 (357)
.|..|..++.-... .. .......++++|+..+..-... ..+.+++.+.|... .+..+....+..-.+.+.+.+
T Consensus 7 ~~~~p~~i~~G~g~~~~l~~~l~~~g~~~~livtd~~~~~~~-~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~ 85 (387)
T 3bfj_A 7 DYLVPNVNFFGPNAISVVGERCQLLGGKKALLVTDKGLRAIK-DGAVDKTLHYLREAGIEVAIFDGVEPNPKDTNVRDGL 85 (387)
T ss_dssp EEECCSEEEESTTGGGGHHHHHHHTTCSEEEEECCTTTC--C-CSSHHHHHHHHHHTTCEEEEECCCCSSCBHHHHHHHH
T ss_pred eeeCCCeEEECCCHHHHHHHHHHHcCCCEEEEEECcchhhcc-chHHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHH
Confidence 36678776654321 11 1111223789999887654320 01345555555432 222222211221222233333
Q ss_pred HHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHHhC---C------------CCCCCCEEEEeC--CCCcch
Q 018367 133 EKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDL---K------------LPHSPPVATVPL--GTGNNI 190 (357)
Q Consensus 133 ~~l~~~~~~lA~~~~~~~~VVv~GGDGTVneVln~L~~~---~------------~~~~~plgIIP~--GTGNDf 190 (357)
+.+.+ .+.+.||++|| |++..+...+.-. . ....+|+..||- |||-..
T Consensus 86 ~~~~~---------~~~d~IIavGG-Gsv~D~aK~iA~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT~gtgSev 150 (387)
T 3bfj_A 86 AVFRR---------EQCDIIVTVGG-GSPHDCGKGIGIAATHEGDLYQYAGIETLTNPLPPIVAVNTTAGTASEV 150 (387)
T ss_dssp HHHHH---------TTCCEEEEEES-HHHHHHHHHHHHHHHSSSCSGGGCBSSCCCSCCCCEEEEECSTTCCGGG
T ss_pred HHHHh---------cCCCEEEEeCC-cchhhHHHHHHHHHhCCCCHHHHhcccccCCCCCCEEEEeCCCCccccc
Confidence 32211 24467888988 8888887666421 0 014689999995 665543
No 33
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=53.11 E-value=51 Score=28.44 Aligned_cols=32 Identities=19% Similarity=0.371 Sum_probs=23.3
Q ss_pred cEEEEEcCchHHHHHHHHHHhCCCCCCCCEEEEeCCCC
Q 018367 150 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTG 187 (357)
Q Consensus 150 ~~VVv~GGDGTVneVln~L~~~~~~~~~plgIIP~GTG 187 (357)
..|.++||.+-|--++.++.. .|.||+ |.-++
T Consensus 61 ViIa~AG~aa~LpgvvA~~t~-----~PVIgV-P~~~~ 92 (163)
T 3ors_A 61 IIIAGAGGAAHLPGMVASLTT-----LPVIGV-PIETK 92 (163)
T ss_dssp EEEEEEESSCCHHHHHHHHCS-----SCEEEE-EECCT
T ss_pred EEEEECCchhhhHHHHHhccC-----CCEEEe-eCCCC
Confidence 458899999999999998853 355665 54444
No 34
>1xah_A Sadhqs, 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, open form, form B, domain movement, cyclase; HET: NAD; 2.20A {Staphylococcus aureus} PDB: 1xag_A* 1xai_A* 1xaj_A* 1xal_A*
Probab=51.43 E-value=12 Score=35.76 Aligned_cols=90 Identities=19% Similarity=0.267 Sum_probs=45.8
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHhhccCc-E--EEeeccChhhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCc
Q 018367 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQ-V--IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGD 158 (357)
Q Consensus 82 ~~vlvIvNP~SG~~~g~~~~~~~~~~L~~~~-V--~~l~~~~p~~~~~~~~~~l~~l~~~~~~lA~~~~~~~~VVv~GGD 158 (357)
++++|+.++... +.+.+.+.+.| ... + +.+....+..-++.+.+.++.+.+.+ ....+.||++||
T Consensus 32 ~~~liVtd~~~~----~~~~~~v~~~L-~~g~~~~~~~~~~e~~p~~~~v~~~~~~~~~~~------~~r~d~iIavGG- 99 (354)
T 1xah_A 32 DQSFLLIDEYVN----QYFANKFDDIL-SYENVHKVIIPAGEKTKTFEQYQETLEYILSHH------VTRNTAIIAVGG- 99 (354)
T ss_dssp SCEEEEEEHHHH----HHHHHHHC-------CEEEEEECSGGGGCSHHHHHHHHHHHHTTC------CCTTCEEEEEES-
T ss_pred CeEEEEECCcHH----HHHHHHHHHHH-hcCCeEEEEECCCCCCCCHHHHHHHHHHHHHcC------CCCCceEEEECC-
Confidence 688999875322 22556666666 332 3 22222222222232333333222111 112367888888
Q ss_pred hHHHHHHHHHHhCCCCCCCCEEEEeC
Q 018367 159 GTASWLLGVVSDLKLPHSPPVATVPL 184 (357)
Q Consensus 159 GTVneVln~L~~~~~~~~~plgIIP~ 184 (357)
|++..+...+... ....+|+..||-
T Consensus 100 Gsv~D~ak~vA~~-~~rgip~i~IPT 124 (354)
T 1xah_A 100 GATGDFAGFVAAT-LLRGVHFIQVPT 124 (354)
T ss_dssp HHHHHHHHHHHHH-BTTCCEEEEEEC
T ss_pred hHHHHHHHHHHHH-hccCCCEEEECC
Confidence 8898888777631 135789999997
No 35
>3rf7_A Iron-containing alcohol dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: NAD EPE; 2.12A {Shewanella denitrificans}
Probab=50.17 E-value=80 Score=30.38 Aligned_cols=113 Identities=14% Similarity=0.095 Sum_probs=57.2
Q ss_pred ccccccccCeEEecCCc-cc---cccCCC---CCcEEEEEcCCCCCCChhhHHHHHHHhhcc--CcE--EEeeccChhhH
Q 018367 56 ILNNYYIPNYILVSGSE-VQ---RSSLIP---SCPVLVFINSKSGGQLGGKLLLTYRSLLNE--NQV--IDLGEKAPDKV 124 (357)
Q Consensus 56 ~~~~~~~p~~~~~~~~~-~~---~~~~~~---~~~vlvIvNP~SG~~~g~~~~~~~~~~L~~--~~V--~~l~~~~p~~~ 124 (357)
+.+.|..|+.++.-... .. ...... .++++||..+.-- ...+. +.|.. ..+ |+-....|.
T Consensus 21 ~~~~f~~p~~i~~G~g~l~~l~~~l~~~g~~~~~~~liVtd~~~~---~~~l~----~~L~~~g~~~~~f~~v~~~pt-- 91 (375)
T 3rf7_A 21 SFKNFKCVPKMIFGRGSFVQLDTVLEQERTDANDFVVFLVDDVHQ---HKPLA----ARVPNKAHDLVIYVNVDDEPT-- 91 (375)
T ss_dssp TSCCCCCCSCEEESTTGGGGHHHHHHTTCCSTTCCEEEEEEGGGT---TSHHH----HHSCCCTTSEEEEECCSSCCB--
T ss_pred chhhhcCCCeEEEcCCHHHHHHHHHHHhcccCCCeEEEEECchhh---hhHHH----HHHHhcCCeEEEEeCCCCCCC--
Confidence 55889999988775532 11 111111 3678888875432 11233 33332 233 332222222
Q ss_pred HHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHHhCC---------------CCCCCCEEEEeC
Q 018367 125 LHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLK---------------LPHSPPVATVPL 184 (357)
Q Consensus 125 ~~~~~~~l~~l~~~~~~lA~~~~~~~~VVv~GGDGTVneVln~L~~~~---------------~~~~~plgIIP~ 184 (357)
.+.+.+.++.+++.+ ..+.+.||++|| |++..+...+.-.- ....+|+..||-
T Consensus 92 ~~~v~~~~~~~~~~~------~~~~D~IIavGG-GS~iD~AK~iA~~~~~~~~~~~~~~~~~~~~~~~P~i~IPT 159 (375)
T 3rf7_A 92 TVQVDELTAQVKAFN------TKLPVSVVGLGG-GSTMDLAKAVSLMLTNPGSSSEYQGWDLIKNPAVHHIGIPT 159 (375)
T ss_dssp HHHHHHHHHHHHHHC------SSCCSEEEEEES-HHHHHHHHHHHHHTSSCSCGGGGCEESCCCSCCCCEEEEES
T ss_pred HHHHHHHHHHHHHhC------CCCCCEEEEeCC-cHHHHHHHHHHHHHhCCCCHHHhhccccccCCCCCEEEEcC
Confidence 222333332221110 012578999999 88888877664210 013578999994
No 36
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=48.58 E-value=8.6 Score=33.04 Aligned_cols=61 Identities=18% Similarity=0.154 Sum_probs=33.6
Q ss_pred EEEcCchHHHHHHHHHHhCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHc
Q 018367 153 IVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKN 217 (357)
Q Consensus 153 Vv~GGDGTVneVln~L~~~~~~~~~plgIIP~GTGNDfARsLG~~~~~~~~~~~~~~~~l~~I~~ 217 (357)
..+|||-|-+ ++.-+.+.-+..+|-+-+|=+|| ||+++..+-.. +.....++.++++.+..
T Consensus 56 ~Gi~G~tt~~-~l~r~~~~v~~~~Pd~vvi~~G~-ND~~~~~~~~~--~~~~~~~l~~ii~~~~~ 116 (209)
T 4hf7_A 56 RGISGQTSYQ-FLLRFREDVINLSPALVVINAGT-NDVAENTGAYN--EDYTFGNIASMAELAKA 116 (209)
T ss_dssp EECTTCCHHH-HHHHHHHHTGGGCCSEEEECCCH-HHHTTSSSSCC--HHHHHHHHHHHHHHHHH
T ss_pred eccCcccHHH-HHHHHHHHHHhcCCCEEEEEeCC-CcCcccccccc--HHHHHHHHHHhhHHHhc
Confidence 3678997644 44444321123467788998997 99987543221 00112345556665544
No 37
>2f48_A Diphosphate--fructose-6-phosphate 1-phosphotransf; phosphotransfer, transferase; HET: FBP; 2.11A {Borrelia burgdorferi} SCOP: c.89.1.1 PDB: 1kzh_A*
Probab=42.89 E-value=30 Score=35.52 Aligned_cols=41 Identities=20% Similarity=0.254 Sum_probs=29.2
Q ss_pred cEEEEEcCchHHHHHHHHHHhC--CCCCCCCEEEEeCCCCcchh
Q 018367 150 LRLIVAGGDGTASWLLGVVSDL--KLPHSPPVATVPLGTGNNIP 191 (357)
Q Consensus 150 ~~VVv~GGDGTVneVln~L~~~--~~~~~~plgIIP~GTGNDfA 191 (357)
+.+|++|||||+.-+.. |.+. .....+++--||-==-||++
T Consensus 168 d~LvvIGGdgS~~~A~~-L~e~~~~~~~~i~vIGiPkTIDNDl~ 210 (555)
T 2f48_A 168 NAIIIIGGDDSNTNAAI-LAEYFKKNGENIQVIGVPKTIDADLR 210 (555)
T ss_dssp SEEEEEESHHHHHHHHH-HHHHHHHTTCCCEEEEEEEETTCCCC
T ss_pred CEEEEeCCCcHHHHHHH-HHHHHHHhCCCCcEEEeccccCCCCC
Confidence 57999999999875542 2221 01346889999988899995
No 38
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=40.49 E-value=55 Score=30.16 Aligned_cols=35 Identities=11% Similarity=0.077 Sum_probs=23.8
Q ss_pred hhhhhhccCcEEEEEcCchHHHHHHHHHHhCCCCCCCCEEEEeC
Q 018367 141 VFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL 184 (357)
Q Consensus 141 ~lA~~~~~~~~VVv~GGDGTVneVln~L~~~~~~~~~plgIIP~ 184 (357)
+++.-....+.+|..|| +|+.|++. ...|.-+||.
T Consensus 218 ~m~~~m~~aDlvI~~gG-~T~~E~~~--------~g~P~i~ip~ 252 (282)
T 3hbm_A 218 NIAKLMNESNKLIISAS-SLVNEALL--------LKANFKAICY 252 (282)
T ss_dssp CHHHHHHTEEEEEEESS-HHHHHHHH--------TTCCEEEECC
T ss_pred HHHHHHHHCCEEEECCc-HHHHHHHH--------cCCCEEEEeC
Confidence 33333344567888899 99999863 2567778885
No 39
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=39.26 E-value=54 Score=31.28 Aligned_cols=119 Identities=12% Similarity=0.101 Sum_probs=60.3
Q ss_pred cccccCeEEecCCc-ccc---ccCCCCCcEEEEEcCCCCCCChhhHHHHHHHhhccC--cEEEeeccChhhHHHHHHHHH
Q 018367 59 NYYIPNYILVSGSE-VQR---SSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QVIDLGEKAPDKVLHQLYVTL 132 (357)
Q Consensus 59 ~~~~p~~~~~~~~~-~~~---~~~~~~~~vlvIvNP~SG~~~g~~~~~~~~~~L~~~--~V~~l~~~~p~~~~~~~~~~l 132 (357)
.|..|..++.-... ..+ ......++++|+..+..- ...+.+++.+.|... .+..+....|..-.+.+.+.+
T Consensus 5 ~f~~p~~i~~G~g~~~~l~~~l~~~g~~~~livtd~~~~---~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~ 81 (386)
T 1rrm_A 5 RMILNETAWFGRGAVGALTDEVKRRGYQKALIVTDKTLV---QCGVVAKVTDKMDAAGLAWAIYDGVVPNPTITVVKEGL 81 (386)
T ss_dssp EEECCSEEEESTTGGGGHHHHHHHHTCCEEEEECBHHHH---HTTHHHHHHHHHHHTTCEEEEECBCCSSCBHHHHHHHH
T ss_pred cccCCceEEECcCHHHHHHHHHHHcCCCEEEEEECcchh---hchHHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHH
Confidence 46778877654321 111 111123678888765431 112566777777543 222222211221222233333
Q ss_pred HHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHHhC---CC--------------CCCCCEEEEeC--CCCcch
Q 018367 133 EKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDL---KL--------------PHSPPVATVPL--GTGNNI 190 (357)
Q Consensus 133 ~~l~~~~~~lA~~~~~~~~VVv~GGDGTVneVln~L~~~---~~--------------~~~~plgIIP~--GTGNDf 190 (357)
+.+.+ .+.+.||++|| |++..+...+.-. .. ...+|+..||- |||-..
T Consensus 82 ~~~~~---------~~~d~IIavGG-Gsv~D~aK~iA~~~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT~gtgSev 148 (386)
T 1rrm_A 82 GVFQN---------SGADYLIAIGG-GSPQDTCKAIGIISNNPEFADVRSLEGLSPTNKPSVPILAIPTTAGTAAEV 148 (386)
T ss_dssp HHHHH---------HTCSEEEEEES-HHHHHHHHHHHHHHHCGGGTTSGGGSEECCCCSCCSCEEEEECSSSCCTTT
T ss_pred HHHHh---------cCcCEEEEeCC-hHHHHHHHHHHHHHhCCCCCCHHHHhcccccCCCCCCEEEEeCCCCchhhh
Confidence 32211 24578999998 8888877665321 00 24689999996 655433
No 40
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=38.50 E-value=1.7e+02 Score=25.39 Aligned_cols=30 Identities=20% Similarity=0.335 Sum_probs=22.7
Q ss_pred cEEEEEcCchHHHHHHHHHHhCCCCCCCCEEEEeCC
Q 018367 150 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLG 185 (357)
Q Consensus 150 ~~VVv~GGDGTVneVln~L~~~~~~~~~plgIIP~G 185 (357)
..|.++||.|-|--|+.++.. .|.||+ |.-
T Consensus 70 ViIa~AG~aahLpgvvA~~t~-----~PVIgV-Pv~ 99 (173)
T 4grd_A 70 AIIAGAGGAAHLPGMLAAKTT-----VPVLGV-PVA 99 (173)
T ss_dssp EEEEEEESSCCHHHHHHHHCC-----SCEEEE-EEC
T ss_pred EEEEeccccccchhhheecCC-----CCEEEE-EcC
Confidence 357789999999999998863 455666 643
No 41
>1sfu_A 34L protein; protein/Z-DNA complex, DNA binding protein/DNA complex; 2.00A {Yaba-like disease virus} SCOP: a.4.5.19
Probab=34.33 E-value=20 Score=27.05 Aligned_cols=31 Identities=10% Similarity=0.088 Sum_probs=24.5
Q ss_pred CCcchhhhcCCCCCCCCCchHHHHHHHHHHHc-CCeeeE
Q 018367 186 TGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKN-AKEMQI 223 (357)
Q Consensus 186 TGNDfARsLG~~~~~~~~~~~~~~~~l~~I~~-~~~~~i 223 (357)
|++++||.||+++ ..+.++|-.+.+ |.+..+
T Consensus 31 Ta~~IAkkLg~sK-------~~vNr~LY~L~kkG~V~~~ 62 (75)
T 1sfu_A 31 TAISLSNRLKINK-------KKINQQLYKLQKEDTVKMV 62 (75)
T ss_dssp CHHHHHHHTTCCH-------HHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHCCCH-------HHHHHHHHHHHHCCCEecC
Confidence 8999999999998 378888988864 554444
No 42
>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A
Probab=33.85 E-value=53 Score=32.39 Aligned_cols=41 Identities=29% Similarity=0.349 Sum_probs=28.6
Q ss_pred cEEEEEcCchHHHHHHHHHHhC--CCCCCCCEEEEeCCCCcchh
Q 018367 150 LRLIVAGGDGTASWLLGVVSDL--KLPHSPPVATVPLGTGNNIP 191 (357)
Q Consensus 150 ~~VVv~GGDGTVneVln~L~~~--~~~~~~plgIIP~GTGNDfA 191 (357)
+.+|++|||||+.-+.. |.+. .....+++--||-===||++
T Consensus 106 d~Lv~IGGdgS~~~A~~-L~~~~~~~g~~i~vIGiPkTIDNDl~ 148 (419)
T 3hno_A 106 GYFFYNGGGDSADTCLK-VSQLSGTLGYPIQAIHVPKTVDNDLP 148 (419)
T ss_dssp EEEEEEESHHHHHHHHH-HHHHHHHTTCCCEEEEEECCTTCCCS
T ss_pred CEEEEeCCchHHHHHHH-HHHHHHHhCCCccEEEecccccCCCc
Confidence 46999999999875542 3220 01235788889988899995
No 43
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=31.43 E-value=1.6e+02 Score=25.41 Aligned_cols=32 Identities=16% Similarity=0.336 Sum_probs=22.4
Q ss_pred cEEEEEcCchHHHHHHHHHHhCCCCCCCCEEEEeCCCC
Q 018367 150 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTG 187 (357)
Q Consensus 150 ~~VVv~GGDGTVneVln~L~~~~~~~~~plgIIP~GTG 187 (357)
..|.++||.+-|--|+.++.. .|.||+ |.-++
T Consensus 69 ViIa~AG~aa~LpgvvA~~t~-----~PVIgV-P~~~~ 100 (170)
T 1xmp_A 69 VIIAGAGGAAHLPGMVAAKTN-----LPVIGV-PVQSK 100 (170)
T ss_dssp EEEEEEESSCCHHHHHHTTCC-----SCEEEE-EECCT
T ss_pred EEEEECCchhhhHHHHHhccC-----CCEEEe-eCCCC
Confidence 457899999999999887653 345655 44443
No 44
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A*
Probab=31.23 E-value=52 Score=35.10 Aligned_cols=42 Identities=21% Similarity=0.292 Sum_probs=29.9
Q ss_pred cEEEEEcCchHHHHHHHHH---HhCCCCCCCCEEEEeCCCCcchhh
Q 018367 150 LRLIVAGGDGTASWLLGVV---SDLKLPHSPPVATVPLGTGNNIPF 192 (357)
Q Consensus 150 ~~VVv~GGDGTVneVln~L---~~~~~~~~~plgIIP~GTGNDfAR 192 (357)
+.+|++|||||+.-+..-. ... ....+|+--||-===||++-
T Consensus 491 d~LvvIGGdgS~~~a~~L~~~~~~~-~~~~i~vvgiPkTIDNDl~g 535 (762)
T 3o8l_A 491 QGLVIIGGFEAYTGGLELMEGRKQF-DELCIPFVVIPATVSNNVPG 535 (762)
T ss_dssp CCEEEEESHHHHHHHHHHHHHHHHC-STTCSCEEEEEBCTTCCCTT
T ss_pred CEEEEeCCchHHHHHHHHHHHHHhc-cccCCCEEeeccccCCCCCC
Confidence 5699999999987664321 111 11368888999999999973
No 45
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=31.12 E-value=2.6e+02 Score=24.21 Aligned_cols=30 Identities=13% Similarity=0.127 Sum_probs=22.3
Q ss_pred cEEEEEcCchHHHHHHHHHHhCCCCCCCCEEEEeC
Q 018367 150 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL 184 (357)
Q Consensus 150 ~~VVv~GGDGTVneVln~L~~~~~~~~~plgIIP~ 184 (357)
..|.++|+.+-|--|+.++.. .|.||+=+.
T Consensus 70 ViIa~AG~aa~LpgvvA~~t~-----~PVIgVP~~ 99 (174)
T 3kuu_A 70 VIIAGNGGAAHLPGMLAAKTL-----VPVLGVPVQ 99 (174)
T ss_dssp EEEEEEESSCCHHHHHHHTCS-----SCEEEEEEC
T ss_pred EEEEECChhhhhHHHHHhccC-----CCEEEeeCC
Confidence 458899999999999988753 355666443
No 46
>2x9a_A Attachment protein G3P; transmembrane, phage infection, phage recognition, HOST-VIRU interaction, virion; 2.47A {Enterobacteria phage IF1} PDB: 2x9b_A
Probab=30.20 E-value=13 Score=27.19 Aligned_cols=11 Identities=9% Similarity=0.090 Sum_probs=9.9
Q ss_pred EEEEEcCchHH
Q 018367 151 RLIVAGGDGTA 161 (357)
Q Consensus 151 ~VVv~GGDGTV 161 (357)
-|+|++||||+
T Consensus 40 GViVg~~dgtv 50 (65)
T 2x9a_A 40 GIGIGYDNDTS 50 (65)
T ss_dssp EEEEEETTTTE
T ss_pred eEEEECCCCCE
Confidence 49999999997
No 47
>3gw6_A Endo-N-acetylneuraminidase; chaperone, glycosidase, hydrolase; HET: TAM; 2.60A {Enterobacteria phage K1F}
Probab=30.12 E-value=16 Score=34.11 Aligned_cols=14 Identities=50% Similarity=0.840 Sum_probs=11.6
Q ss_pred cEEEEEcCchHHHH
Q 018367 150 LRLIVAGGDGTASW 163 (357)
Q Consensus 150 ~~VVv~GGDGTVne 163 (357)
-+||||||+||-+.
T Consensus 47 q~~i~~g~~~t~~~ 60 (275)
T 3gw6_A 47 QRIIFCGGEGTSST 60 (275)
T ss_dssp CEEEEESSSSSSTT
T ss_pred cEEEEecCCCCCCC
Confidence 47999999999653
No 48
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=29.08 E-value=2.1e+02 Score=24.74 Aligned_cols=32 Identities=19% Similarity=0.369 Sum_probs=23.5
Q ss_pred cEEEEEcCchHHHHHHHHHHhCCCCCCCCEEEEeCCCC
Q 018367 150 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTG 187 (357)
Q Consensus 150 ~~VVv~GGDGTVneVln~L~~~~~~~~~plgIIP~GTG 187 (357)
..|.++|+.+-|--|+.++.. .|.||+ |.-++
T Consensus 65 ViIa~AG~aa~LpgvvA~~t~-----~PVIgV-P~~~~ 96 (174)
T 3lp6_A 65 VIIAGAGGAAHLPGMVAAATP-----LPVIGV-PVPLG 96 (174)
T ss_dssp EEEEEEESSCCHHHHHHHHCS-----SCEEEE-EECCS
T ss_pred EEEEecCchhhhHHHHHhccC-----CCEEEe-eCCCC
Confidence 568899999999999998853 345565 55444
No 49
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=28.29 E-value=3e+02 Score=24.01 Aligned_cols=85 Identities=16% Similarity=0.266 Sum_probs=44.8
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHhhccCcE-EEeecc----ChhhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEc
Q 018367 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEK----APDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAG 156 (357)
Q Consensus 82 ~~vlvIvNP~SG~~~g~~~~~~~~~~L~~~~V-~~l~~~----~p~~~~~~~~~~l~~l~~~~~~lA~~~~~~~~VVv~G 156 (357)
-|...|+= |+..--.+.++....|....+ |++.-. .|+... ..+++.. +..-...|.++|
T Consensus 13 ~~~V~Iim---GS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~----~~~~~a~--------~~g~~ViIa~AG 77 (183)
T 1o4v_A 13 VPRVGIIM---GSDSDLPVMKQAAEILEEFGIDYEITIVSAHRTPDRMF----EYAKNAE--------ERGIEVIIAGAG 77 (183)
T ss_dssp -CEEEEEE---SCGGGHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHH----HHHHHTT--------TTTCCEEEEEEE
T ss_pred CCeEEEEe---ccHHHHHHHHHHHHHHHHcCCCeEEEEEcccCCHHHHH----HHHHHHH--------hCCCcEEEEecC
Confidence 44555543 444444556666666665554 555432 333322 1111100 001124588999
Q ss_pred CchHHHHHHHHHHhCCCCCCCCEEEEeCCCC
Q 018367 157 GDGTASWLLGVVSDLKLPHSPPVATVPLGTG 187 (357)
Q Consensus 157 GDGTVneVln~L~~~~~~~~~plgIIP~GTG 187 (357)
|.+-+--|+.++.. .|.||+ |.-++
T Consensus 78 ~aa~LpgvvA~~t~-----~PVIgV-P~~~~ 102 (183)
T 1o4v_A 78 GAAHLPGMVASITH-----LPVIGV-PVKTS 102 (183)
T ss_dssp SSCCHHHHHHHHCS-----SCEEEE-EECCT
T ss_pred cccccHHHHHhccC-----CCEEEe-eCCCC
Confidence 99999999998853 344554 55443
No 50
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=26.60 E-value=1.3e+02 Score=32.88 Aligned_cols=42 Identities=24% Similarity=0.328 Sum_probs=30.0
Q ss_pred CcEEEEEcCchHHHHHHHHHHhCCC---CCCCCEEEEeCCCCcchh
Q 018367 149 RLRLIVAGGDGTASWLLGVVSDLKL---PHSPPVATVPLGTGNNIP 191 (357)
Q Consensus 149 ~~~VVv~GGDGTVneVln~L~~~~~---~~~~plgIIP~GTGNDfA 191 (357)
-+.+|++|||||..-+. .|.+... ...+|+--||-===||++
T Consensus 689 Id~LvvIGGdgS~~~a~-~L~~~~~~y~~~~I~vVGIPkTIDNDl~ 733 (989)
T 3opy_A 689 FDGLIIIGGFEAFTALY-ELDAARAQYPIFNIPMCCLPATVSNNVP 733 (989)
T ss_dssp CSEEEEEESHHHHHHHH-HHHHHTTTCGGGCSCEEEEEBCSSCCCT
T ss_pred CCEEEEeCCchHHHHHH-HHHHHHhhCCCcCCcEEeccccccCCCC
Confidence 35799999999986543 4543211 126888889999999995
No 51
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=25.98 E-value=39 Score=28.90 Aligned_cols=65 Identities=15% Similarity=0.094 Sum_probs=37.7
Q ss_pred EEEEEcCchHHH---HHHHHHHhCCCCCCCCEEEEeCCCCcchhhhcCCCCCC---CCCchHHHHHHHHHHHcC
Q 018367 151 RLIVAGGDGTAS---WLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKN---PNTDQQAVLSFLEQVKNA 218 (357)
Q Consensus 151 ~VVv~GGDGTVn---eVln~L~~~~~~~~~plgIIP~GTGNDfARsLG~~~~~---~~~~~~~~~~~l~~I~~~ 218 (357)
.-..++|+.|.. +++..+.. +...+-+.+|=+|| ||+.+........ ..+-..++.++++.+...
T Consensus 56 ~N~g~~G~t~~~~~~~~~~~~~~--~~~~pd~Vii~~G~-ND~~~~~~~~~~~~~~~~~f~~~l~~li~~l~~~ 126 (232)
T 3dc7_A 56 DNLGISGSTIGSRYDAMAVRYQA--IPEDADFIAVFGGV-NDYGRDQPLGQYGDCDMTTFYGALMMLLTGLQTN 126 (232)
T ss_dssp EEEECTTCCSSTTSSCHHHHGGG--SCTTCSEEEEECCH-HHHHTTCCCCCTTCCSTTSHHHHHHHHHHHHHHH
T ss_pred EEeeeCCcccccChHHHHHHHHh--cCCCCCEEEEEEec-cccccCcCCccccccchHHHHHHHHHHHHHHHHh
Confidence 345667877775 45555544 23467788998885 9988743222110 001123777888888653
No 52
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=25.54 E-value=1.7e+02 Score=24.93 Aligned_cols=30 Identities=13% Similarity=0.194 Sum_probs=22.1
Q ss_pred CcEEEEEcCchHHHHHHHHHHhCCCCCCCCEEEEe
Q 018367 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVP 183 (357)
Q Consensus 149 ~~~VVv~GGDGTVneVln~L~~~~~~~~~plgIIP 183 (357)
...|.++||.|-+--|+.++.. .|.||+=+
T Consensus 53 ~ViIa~AG~aa~Lpgvva~~t~-----~PVIgVP~ 82 (157)
T 2ywx_A 53 DVFIAIAGLAAHLPGVVASLTT-----KPVIAVPV 82 (157)
T ss_dssp SEEEEEEESSCCHHHHHHTTCS-----SCEEEEEE
T ss_pred CEEEEEcCchhhhHHHHHhccC-----CCEEEecC
Confidence 4568899999999999887753 35566544
No 53
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=24.68 E-value=1.5e+02 Score=31.64 Aligned_cols=44 Identities=18% Similarity=0.129 Sum_probs=30.1
Q ss_pred CcEEEEEcCchHHHHHH----------HHHHhC-C-------CCCCCCEEEEeCCCCcchhh
Q 018367 149 RLRLIVAGGDGTASWLL----------GVVSDL-K-------LPHSPPVATVPLGTGNNIPF 192 (357)
Q Consensus 149 ~~~VVv~GGDGTVneVl----------n~L~~~-~-------~~~~~plgIIP~GTGNDfAR 192 (357)
=+.+|++|||||+.-+. ..|.+. + ....+++--||-===||++-
T Consensus 99 Id~LvvIGGdgS~~~A~~l~~e~~~l~~eL~~~~~is~e~~~~~~~i~vVGiPkTIDNDl~g 160 (766)
T 3o8o_B 99 VDALIVCGGDGSLTGADLFRSEWPSLIEELLKTNRISNEQYERMKHLNICGTVGSIDNDMST 160 (766)
T ss_dssp CCEEEEEECHHHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHTCCCEEEEEEBCTTCCCTT
T ss_pred CCEEEEeCCChhHHHHHHHHHhhhHHHHHHHhcccccHHHHhcCCCCcEEEEeccccCCCCC
Confidence 35799999999997552 223321 0 01367888899888999974
No 54
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=24.67 E-value=84 Score=33.62 Aligned_cols=43 Identities=16% Similarity=0.115 Sum_probs=29.6
Q ss_pred cEEEEEcCchHHHHHH----------HHHHhC--------CCCCCCCEEEEeCCCCcchhh
Q 018367 150 LRLIVAGGDGTASWLL----------GVVSDL--------KLPHSPPVATVPLGTGNNIPF 192 (357)
Q Consensus 150 ~~VVv~GGDGTVneVl----------n~L~~~--------~~~~~~plgIIP~GTGNDfAR 192 (357)
+.+|++|||||+.-+. ..|.+. .....+++--||-===||++-
T Consensus 101 d~LvvIGGdgS~~~A~~l~~e~~~l~~eL~~~~~is~e~~~~~~~i~vVGIPkTIDNDl~g 161 (787)
T 3o8o_A 101 DALVVCGGDGSLTGADLFRHEWPSLVDELVAEGRFTKEEVAPYKNLSIVGLVGSIDNDMSG 161 (787)
T ss_dssp EEEEEEECHHHHHHHHHHHTTHHHHHHHHHSSSSCCTTTTTTTCSCEEEEEEEESSCCCTT
T ss_pred CEEEEeCCCchHHHHHHHHHhhHHHHHHHHhcccccHHHHhcCCCCcEEEEeecCcCCCCC
Confidence 4699999999997652 223221 011367888899888899973
No 55
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A*
Probab=24.59 E-value=1.4e+02 Score=31.73 Aligned_cols=43 Identities=19% Similarity=0.111 Sum_probs=28.8
Q ss_pred CcEEEEEcCchHHHHHHH----------HHHhC-C-------CCCCCCEEEEeCCCCcchh
Q 018367 149 RLRLIVAGGDGTASWLLG----------VVSDL-K-------LPHSPPVATVPLGTGNNIP 191 (357)
Q Consensus 149 ~~~VVv~GGDGTVneVln----------~L~~~-~-------~~~~~plgIIP~GTGNDfA 191 (357)
=+.+|++|||||+.-+.. .|.+. + ....+++--||-===||++
T Consensus 110 Id~LvvIGGdgS~~gA~~l~~e~~~ll~eL~~~g~i~~~~~~~~~~i~vVGIPkTIDNDl~ 170 (762)
T 3o8l_A 110 ITNLCVIGGDGSLTGADTFRSEWSDLLSDLQKAGKITAEEATRSSYLNIVGLVGSIDNDFC 170 (762)
T ss_dssp CCEEEEEECHHHHHHHHHHHHTTHHHHHHTTTTTSCTTTGGGSTTCCEEEEEEBCTTCCCS
T ss_pred CCEEEEeCCCchHHHHHHHHHHhHHHHHHHHhccchhHHHHhcCCCCCeEEeecCcccCCC
Confidence 357999999999976541 22111 0 1135778888988889997
No 56
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=23.92 E-value=3.6e+02 Score=23.50 Aligned_cols=30 Identities=13% Similarity=0.101 Sum_probs=22.3
Q ss_pred cEEEEEcCchHHHHHHHHHHhCCCCCCCCEEEEeC
Q 018367 150 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL 184 (357)
Q Consensus 150 ~~VVv~GGDGTVneVln~L~~~~~~~~~plgIIP~ 184 (357)
..|.++||.+-+--|+.++.. .|.||+=+.
T Consensus 79 ViIa~AG~aa~LpgvvA~~t~-----~PVIgVP~~ 108 (182)
T 1u11_A 79 VIIAGAGGAAHLPGMCAAWTR-----LPVLGVPVE 108 (182)
T ss_dssp EEEEEEESSCCHHHHHHHHCS-----SCEEEEEEC
T ss_pred EEEEecCchhhhHHHHHhccC-----CCEEEeeCC
Confidence 457899999999999998863 355665443
No 57
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=23.85 E-value=3.5e+02 Score=23.23 Aligned_cols=32 Identities=19% Similarity=0.349 Sum_probs=22.8
Q ss_pred cEEEEEcCchHHHHHHHHHHhCCCCCCCCEEEEeCCCC
Q 018367 150 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTG 187 (357)
Q Consensus 150 ~~VVv~GGDGTVneVln~L~~~~~~~~~plgIIP~GTG 187 (357)
..|.++||.+-|--|+.++.. .|.|| +|.-++
T Consensus 63 ViIa~AG~aa~LpgvvA~~t~-----~PVIg-VP~~~~ 94 (166)
T 3oow_A 63 VIIAGAGGAAHLPGMVAAKTT-----LPVLG-VPVKSS 94 (166)
T ss_dssp EEEEEECSSCCHHHHHHHTCS-----SCEEE-EECCCT
T ss_pred EEEEECCcchhhHHHHHhccC-----CCEEE-eecCcC
Confidence 457799999999999988753 34455 465444
No 58
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=22.01 E-value=1.5e+02 Score=32.28 Aligned_cols=42 Identities=24% Similarity=0.295 Sum_probs=29.8
Q ss_pred CcEEEEEcCchHHHHHHHHHHhCC--C-CCCCCEEEEeCCCCcchh
Q 018367 149 RLRLIVAGGDGTASWLLGVVSDLK--L-PHSPPVATVPLGTGNNIP 191 (357)
Q Consensus 149 ~~~VVv~GGDGTVneVln~L~~~~--~-~~~~plgIIP~GTGNDfA 191 (357)
-+.+|++|||||+.-+. .|.+.. . ...+|+--||-===||++
T Consensus 663 Id~LvvIGGdgS~~~a~-~L~~~~~~~~~~~i~vVGIPkTIDNDl~ 707 (941)
T 3opy_B 663 FDGLILVGGFEAFISLH-QLERARINYPSLRIPLVLIPATISNNVP 707 (941)
T ss_dssp CSEEEEEESHHHHHHHH-HHHHGGGTCGGGCSCEEEEEBCSSCCCT
T ss_pred CCEEEEeCCchHHHHHH-HHHHHHHhcCccCCcEEeeeccccCCCC
Confidence 35799999999986543 333211 1 126888899999999996
No 59
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=21.78 E-value=3.1e+02 Score=23.59 Aligned_cols=29 Identities=14% Similarity=0.216 Sum_probs=21.5
Q ss_pred cEEEEEcCchHHHHHHHHHHhCCCCCCCCEEEEeC
Q 018367 150 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL 184 (357)
Q Consensus 150 ~~VVv~GGDGTVneVln~L~~~~~~~~~plgIIP~ 184 (357)
..|.++|+.+-|--++.++.. .|.||+ |.
T Consensus 64 ViIa~AG~aa~LpgvvA~~t~-----~PVIgV-P~ 92 (169)
T 3trh_A 64 VFIAAAGLAAHLAGTIAAHTL-----KPVIGV-PM 92 (169)
T ss_dssp EEEEEECSSCCHHHHHHHTCS-----SCEEEE-EC
T ss_pred EEEEECChhhhhHHHHHhcCC-----CCEEEe-ec
Confidence 457799999999999988753 355665 44
No 60
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=20.12 E-value=1.8e+02 Score=31.12 Aligned_cols=42 Identities=26% Similarity=0.307 Sum_probs=30.1
Q ss_pred CcEEEEEcCchHHHHHHHHHHhCCC---CCCCCEEEEeCCCCcchh
Q 018367 149 RLRLIVAGGDGTASWLLGVVSDLKL---PHSPPVATVPLGTGNNIP 191 (357)
Q Consensus 149 ~~~VVv~GGDGTVneVln~L~~~~~---~~~~plgIIP~GTGNDfA 191 (357)
-+.+|++|||||..-+. .|.+... ...+|+--||-=-=||++
T Consensus 484 Id~LvvIGGdgS~~~a~-~L~~~~~~~~~~~i~vIgiPkTIDNDl~ 528 (787)
T 3o8o_A 484 LDGLIILGGFEGFRSLK-QLRDGRTQHPIFNIPMCLIPATVSNNVP 528 (787)
T ss_dssp CSEEEEEESHHHHHHHH-HHHHHTTTCGGGGSCEEEEEBCTTCCCT
T ss_pred CCEEEEeCCchHHHHHH-HHHHHHHhcCccCCceeecccccccCCC
Confidence 35799999999987654 3332110 125888899999999996
Done!