BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018375
(357 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3JWE|A Chain A, Crystal Structure Of Human Mono-Glyceride Lipase In
Complex With Sar629
pdb|3JWE|B Chain B, Crystal Structure Of Human Mono-Glyceride Lipase In
Complex With Sar629
Length = 320
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 148/295 (50%), Gaps = 14/295 (4%)
Query: 15 VEYQE-EYIRNARGVQLFTCRWLPFSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAV 73
+ YQ+ ++ NA G LF W P TPKA++F+ HG G E SG E L V
Sbjct: 31 IPYQDLPHLVNADGQYLFCRYWKPTGTPKALIFVSHGAG-EHSGRYEELARMLMGLDLLV 89
Query: 74 FGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLL 133
F D+ GHG+S G R + F V D S+ Q++Y FL G SMGGA+ +L
Sbjct: 90 FAHDHVGHGQSEGERMVVSDFHVFVRDVLQHVDSM--QKDYPGLPVFLLGHSMGGAIAIL 147
Query: 134 LHKKDPSFWNGAVLVAPMCKIS-EKVKPHPVLVNILTRVEEIIPKWKIVPTKDVIDSAFK 192
+ P + G VL++P+ + E VL + + ++P + P IDS+
Sbjct: 148 TAAERPGHFAGMVLISPLVLANPESATTFKVLAAKVLNL--VLPNLSLGP----IDSSVL 201
Query: 193 DSIKRE-EIRN-NKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDP 250
K E +I N + LI + ++ +++L +E +L K+ +PF +L G AD + D
Sbjct: 202 SRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDS 261
Query: 251 EVSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDERMSDAN 305
+ + L E A S+DKT+K+Y G +H L P E + VF +I W+ +R + A
Sbjct: 262 KGAYLLMELAKSQDKTLKIYEGAYHVLHKELP-EVTNSVFHEINMWVSQRTATAG 315
>pdb|3HJU|A Chain A, Crystal Structure Of Human Monoglyceride Lipase
pdb|3HJU|B Chain B, Crystal Structure Of Human Monoglyceride Lipase
Length = 342
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 148/295 (50%), Gaps = 14/295 (4%)
Query: 15 VEYQE-EYIRNARGVQLFTCRWLPFSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAV 73
+ YQ+ ++ NA G LF W P TPKA++F+ HG G E SG E L V
Sbjct: 32 IPYQDLPHLVNADGQYLFCRYWKPTGTPKALIFVSHGAG-EHSGRYEELARMLMGLDLLV 90
Query: 74 FGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLL 133
F D+ GHG+S G R + F V D S+ Q++Y FL G SMGGA+ +L
Sbjct: 91 FAHDHVGHGQSEGERMVVSDFHVFVRDVLQHVDSM--QKDYPGLPVFLLGHSMGGAIAIL 148
Query: 134 LHKKDPSFWNGAVLVAPMCKIS-EKVKPHPVLVNILTRVEEIIPKWKIVPTKDVIDSAFK 192
+ P + G VL++P+ + E VL + + ++P + P IDS+
Sbjct: 149 TAAERPGHFAGMVLISPLVLANPESATTFKVLAAKVLNL--VLPNLSLGP----IDSSVL 202
Query: 193 DSIKRE-EIRN-NKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDP 250
K E +I N + LI + ++ +++L +E +L K+ +PF +L G AD + D
Sbjct: 203 SRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDS 262
Query: 251 EVSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDERMSDAN 305
+ + L E A S+DKT+K+Y G +H L P E + VF +I W+ +R + A
Sbjct: 263 KGAYLLMELAKSQDKTLKIYEGAYHVLHKELP-EVTNSVFHEINMWVSQRTATAG 316
>pdb|3PE6|A Chain A, Crystal Structure Of A Soluble Form Of Human Mgll In
Complex With An Inhibitor
Length = 303
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 147/295 (49%), Gaps = 14/295 (4%)
Query: 15 VEYQE-EYIRNARGVQLFTCRWLPFSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAV 73
+ YQ+ ++ NA G LF W P TPKA++F+ HG G E SG E L V
Sbjct: 14 IPYQDLPHLVNADGQYLFCRYWAPTGTPKALIFVSHGAG-EHSGRYEELARMLMGLDLLV 72
Query: 74 FGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLL 133
F D+ GHG+S G R + F V D S+ Q++Y FL G SMGGA+ +L
Sbjct: 73 FAHDHVGHGQSEGERMVVSDFHVFVRDVLQHVDSM--QKDYPGLPVFLLGHSMGGAIAIL 130
Query: 134 LHKKDPSFWNGAVLVAPMCKIS-EKVKPHPVLVNILTRVEEIIPKWKIVPTKDVIDSAFK 192
+ P + G VL++P+ + E VL + + ++P P IDS+
Sbjct: 131 TAAERPGHFAGMVLISPLVLANPESATTFKVLAAKV--LNSVLPNLSSGP----IDSSVL 184
Query: 193 DSIKRE-EIRN-NKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDP 250
K E +I N + LI + ++ +++L +E +L K+ +PF +L G AD + D
Sbjct: 185 SRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDS 244
Query: 251 EVSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDERMSDAN 305
+ + L E A S+DKT+K+Y G +H L P E + VF +I W+ +R + A
Sbjct: 245 KGAYLLMELAKSQDKTLKIYEGAYHVLHKELP-EVTNSVFHEINMWVSQRTATAG 298
>pdb|3JW8|A Chain A, Crystal Structure Of Human Mono-Glyceride Lipase
pdb|3JW8|B Chain B, Crystal Structure Of Human Mono-Glyceride Lipase
Length = 320
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 146/295 (49%), Gaps = 14/295 (4%)
Query: 15 VEYQE-EYIRNARGVQLFTCRWLPFSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAV 73
+ YQ+ ++ NA G LF W P TPKA++F+ HG G E SG E L V
Sbjct: 31 IPYQDLPHLVNADGQYLFCRYWKPTGTPKALIFVSHGAG-EHSGRYEELARXLXGLDLLV 89
Query: 74 FGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLL 133
F D+ GHG+S G R + F V D S Q++Y FL G S GGA+ +L
Sbjct: 90 FAHDHVGHGQSEGERXVVSDFHVFVRDVLQHVDS--XQKDYPGLPVFLLGHSXGGAIAIL 147
Query: 134 LHKKDPSFWNGAVLVAPMCKIS-EKVKPHPVLVNILTRVEEIIPKWKIVPTKDVIDSAFK 192
+ P + G VL++P+ + E VL + + ++P + P IDS+
Sbjct: 148 TAAERPGHFAGXVLISPLVLANPESATTFKVLAAKVLNL--VLPNLSLGP----IDSSVL 201
Query: 193 DSIKRE-EIRN-NKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDP 250
K E +I N + LI + ++ +++L +E +L K+ +PF +L G AD + D
Sbjct: 202 SRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDS 261
Query: 251 EVSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDERMSDAN 305
+ + L E A S+DKT+K+Y G +H L P E + VF +I W+ +R + A
Sbjct: 262 KGAYLLXELAKSQDKTLKIYEGAYHVLHKELP-EVTNSVFHEINXWVSQRTATAG 315
>pdb|1TQH|A Chain A, Covalent Reaction Intermediate Revealed In Crystal
Structure Of The Geobacillus Stearothermophilus
Carboxylesterase Est30
Length = 247
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 104/271 (38%), Gaps = 49/271 (18%)
Query: 38 FSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENI 97
F + V L HG+ S +R G L S GY Y+GHG + E +
Sbjct: 12 FEAGERAVLLLHGF-TGNSADVRMLGRFLESKGYTCHAPIYKGHG--------VPPEELV 62
Query: 98 VNDCDDFFKSVCAQEEYTDKARF----LYGESMGGAVTLLLHKKDPSFWNGAV-LVAPMC 152
DD+++ V E+ + + G S+GG +L L P G V + APM
Sbjct: 63 HTGPDDWWQDVMNGYEFLKNKGYEKIAVAGLSLGGVFSLKLGYTVPI--EGIVTMCAPMY 120
Query: 153 KISEKVKPHPVLVNILTRVEEIIPKWKIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPR 212
SE+ VL + K+ E ++ + I Q+ +
Sbjct: 121 IKSEETMYEGVL-------------------------EYAREYKKREGKSEEQIEQEMEK 155
Query: 213 LK-TALEMLRTSMSL----EDSLSKVMIPFFVLHGEADTVTDPEVSKALYERASSRDKTI 267
K T ++ L+ L D L + P FV+ D + +P+ + +Y S K I
Sbjct: 156 FKQTPMKTLKALQELIADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQI 215
Query: 268 KLYPGMWHALTSGEPDENIDIVFGDIIAWLD 298
K Y H +T D+ D + DI A+L+
Sbjct: 216 KWYEQSGHVITL---DQEKDQLHEDIYAFLE 243
>pdb|3PF8|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536
pdb|3PF8|B Chain B, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536
Length = 270
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 98/258 (37%), Gaps = 45/258 (17%)
Query: 27 GVQLFTCRWLPFSTPKAVVFLCHGY-GMECSGFMRECGTRLASAGYAVFGIDYEGHGRSR 85
G+QL R PF + + HG+ + +RE L A D+ GHG S
Sbjct: 31 GLQLVGTREEPFGEIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSD 90
Query: 86 GARCYIKKFEN--IVNDCDDFFKSVCAQEEYTD---KARFLYGESMGGAVTLLLHKKDPS 140
G KFEN ++N+ +D + TD + +L G S GG V +L P
Sbjct: 91 G------KFENMTVLNEIED--ANAILNYVKTDPHVRNIYLVGHSQGGVVASMLAGLYPD 142
Query: 141 FWNGAVLVAPMCKISEKVKPHPVLVNILTRVEEIIPKWKIVPTKDVIDSAFKDSIKREEI 200
VL+AP + K +T + IP +P KD+ F +
Sbjct: 143 LIKKVVLLAPAATL--KGDALEGNTQGVTYNPDHIPDR--LPFKDLTLGGFY-------L 191
Query: 201 RNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYERA 260
R I Q P + + + + P ++HG DTV P SK Y++
Sbjct: 192 R----IAQQLPIYEVSAQFTK--------------PVCLIHGTDDTVVSPNASKK-YDQI 232
Query: 261 SSRDKTIKLYPGMWHALT 278
++ T+ L G H +
Sbjct: 233 -YQNSTLHLIEGADHCFS 249
>pdb|3PF9|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant
pdb|3PFB|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With
Ethylferulate
pdb|3PFB|B Chain B, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With
Ethylferulate
pdb|3PFC|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With Ferulic
Acid
pdb|3S2Z|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With Caffeic
Acid
pdb|3S2Z|B Chain B, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With Caffeic
Acid
Length = 270
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 98/258 (37%), Gaps = 45/258 (17%)
Query: 27 GVQLFTCRWLPFSTPKAVVFLCHGY-GMECSGFMRECGTRLASAGYAVFGIDYEGHGRSR 85
G+QL R PF + + HG+ + +RE L A D+ GHG S
Sbjct: 31 GLQLVGTREEPFGEIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSD 90
Query: 86 GARCYIKKFEN--IVNDCDDFFKSVCAQEEYTD---KARFLYGESMGGAVTLLLHKKDPS 140
G KFEN ++N+ +D + TD + +L G + GG V +L P
Sbjct: 91 G------KFENMTVLNEIED--ANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPD 142
Query: 141 FWNGAVLVAPMCKISEKVKPHPVLVNILTRVEEIIPKWKIVPTKDVIDSAFKDSIKREEI 200
VL+AP + K +T + IP +P KD+ F +
Sbjct: 143 LIKKVVLLAPAATL--KGDALEGNTQGVTYNPDHIPDR--LPFKDLTLGGFY-------L 191
Query: 201 RNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYERA 260
R I Q P + + + + P ++HG DTV P SK Y++
Sbjct: 192 R----IAQQLPIYEVSAQFTK--------------PVCLIHGTDDTVVSPNASKK-YDQI 232
Query: 261 SSRDKTIKLYPGMWHALT 278
++ T+ L G H +
Sbjct: 233 -YQNSTLHLIEGADHCFS 249
>pdb|3QM1|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With
Ethylferulate, Form Ii
Length = 265
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 98/258 (37%), Gaps = 45/258 (17%)
Query: 27 GVQLFTCRWLPFSTPKAVVFLCHGY-GMECSGFMRECGTRLASAGYAVFGIDYEGHGRSR 85
G+QL R PF + + HG+ + +RE L A D+ GHG S
Sbjct: 31 GLQLVGTREEPFGEIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSD 90
Query: 86 GARCYIKKFEN--IVNDCDDFFKSVCAQEEYTD---KARFLYGESMGGAVTLLLHKKDPS 140
G KFEN ++N+ +D + TD + +L G + GG V +L P
Sbjct: 91 G------KFENMTVLNEIED--ANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPD 142
Query: 141 FWNGAVLVAPMCKISEKVKPHPVLVNILTRVEEIIPKWKIVPTKDVIDSAFKDSIKREEI 200
VL+AP + K +T + IP +P KD+ F +
Sbjct: 143 LIKKVVLLAPAATL--KGDALEGNTQGVTYNPDHIPDR--LPFKDLTLGGFY-------L 191
Query: 201 RNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYERA 260
R I Q P + + + + P ++HG DTV P SK Y++
Sbjct: 192 R----IAQQLPIYEVSAQFTK--------------PVCLIHGTDDTVVSPNASKK-YDQI 232
Query: 261 SSRDKTIKLYPGMWHALT 278
++ T+ L G H +
Sbjct: 233 -YQNSTLHLIEGADHCFS 249
>pdb|1A8S|A Chain A, Chloroperoxidase FPROPIONATE COMPLEX
Length = 273
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 106/275 (38%), Gaps = 26/275 (9%)
Query: 27 GVQLFTCRWLPFSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRG 86
G Q++ W + + +VF HG+ + + + LA+ GY V D GHGRS
Sbjct: 8 GTQIYYKDW---GSGQPIVF-SHGWPLNADSWESQM-IFLAAQGYRVIAHDRRGHGRSSQ 62
Query: 87 ARCYIKKFENIVNDCDDFFKSVCAQEEYTD-KARFLYGESMGG---AVTLLLHKKDPSFW 142
ND D + + E+ D + L+G S GG A + H
Sbjct: 63 PWS--------GNDMDTYADDLAQLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAK 114
Query: 143 NGAVLVAPMCKISEKVKPHPVLVNILTRVEEIIPKWKIVPTKDVIDSAF----KDSIKRE 198
G + P + + P + + + + + + KD+ F + K
Sbjct: 115 AGLISAVPPLMLKTEANPGGLPMEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSS 174
Query: 199 EIRNNKLIYQD-KPRLKTALEMLR--TSMSLEDSLSKVMIPFFVLHGEADTVTDPEVSKA 255
+ Q K A + ++ + + L K+ +P V+HG+AD V E S
Sbjct: 175 AGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTEDLKKIDVPTLVVHGDADQVVPIEAS-G 233
Query: 256 LYERASSRDKTIKLYPGMWHALTSGEPDE-NIDIV 289
+ A + T+K+Y G H LT D+ N D++
Sbjct: 234 IASAALVKGSTLKIYSGAPHGLTDTHKDQLNADLL 268
>pdb|1ZOI|A Chain A, Crystal Structure Of A Stereoselective Esterase From
Pseudomonas Putida Ifo12996
pdb|1ZOI|B Chain B, Crystal Structure Of A Stereoselective Esterase From
Pseudomonas Putida Ifo12996
pdb|1ZOI|C Chain C, Crystal Structure Of A Stereoselective Esterase From
Pseudomonas Putida Ifo12996
Length = 276
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 111/293 (37%), Gaps = 35/293 (11%)
Query: 20 EYIRNARGVQLFTCRWLPFSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYE 79
Y+ GVQ+F W P P V+ HG+ + + + LA GY V D
Sbjct: 2 SYVTTKDGVQIFYKDWGPRDAP--VIHFHHGWPLSADDWDAQLLFFLAH-GYRVVAHDRR 58
Query: 80 GHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTD-KARFLYGESMGGAVTLLLHKKD 138
GHGRS + ++ +D D + V A + + G S GG + +
Sbjct: 59 GHGRSS------QVWDG--HDMDHYADDVAAVVAHLGIQGAVHVGHSTGGGEVVRYMARH 110
Query: 139 P-SFWNGAVLVA--PMCKISEKVKPHPVLVNILTRVEEIIPKWKIVPTKDVIDSAF---- 191
P AVL+A P + P + ++ + + + +DV F
Sbjct: 111 PEDKVAKAVLIAAVPPLMVQTPGNPGGLPKSVFDGFQAQVASNRAQFYRDVPAGPFYGYN 170
Query: 192 KDSIKREE--IRN---NKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADT 246
+ ++ E I N +I K + +T + + L + P V+HG+ D
Sbjct: 171 RPGVEASEGIIGNWWRQGMIGSAKAHYDGIVAFSQTDFT--EDLKGIQQPVLVMHGDDDQ 228
Query: 247 VTDPEVSKALYER--ASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWL 297
+ E S L + + KT K YP G P + D++ D++A++
Sbjct: 229 IVPYENSGVLSAKLLPNGALKTYKGYP-------HGMPTTHADVINADLLAFI 274
>pdb|3QIT|A Chain A, Thioesterase Domain From Curacin Biosynthetic Pathway
pdb|3QIT|B Chain B, Thioesterase Domain From Curacin Biosynthetic Pathway
pdb|3QIT|C Chain C, Thioesterase Domain From Curacin Biosynthetic Pathway
pdb|3QIT|D Chain D, Thioesterase Domain From Curacin Biosynthetic Pathway
Length = 286
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 52/133 (39%), Gaps = 14/133 (10%)
Query: 19 EEYIRNARGVQLFTCRWLPFSTPKAVVFLC-HGYGMECSGFMRECGTRLASAGYAVFGID 77
EE G Q+ C W +P+ V LC HG +E +E LA+ GY V D
Sbjct: 5 EEKFLEFGGNQICLCSW---GSPEHPVVLCIHGI-LEQGLAWQEVALPLAAQGYRVVAPD 60
Query: 78 YEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQ--EEYTDKARFLYGESMGGAVTLLLH 135
GHGRS E + + F + + +E D+ L G SMG + +
Sbjct: 61 LFGHGRS-------SHLEMVTSYSSLTFLAQIDRVIQELPDQPLLLVGHSMGAMLATAIA 113
Query: 136 KKDPSFWNGAVLV 148
P +LV
Sbjct: 114 SVRPKKIKELILV 126
>pdb|2XMZ|A Chain A, Structure Of Menh From S. Aureus
Length = 269
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 9/93 (9%)
Query: 40 TPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVN 99
T + +VFL HG+ + + + Y V ID GHG + + F+ I
Sbjct: 15 TNQVLVFL-HGFLSDSRTYHNHIEK--FTDNYHVITIDLPGHGEDQSSMDETWNFDYITT 71
Query: 100 DCDDFFKSVCAQEEYTDKARFLYGESMGGAVTL 132
D ++Y DK+ L+G SMGG V L
Sbjct: 72 LLDRIL------DKYKDKSITLFGYSMGGRVAL 98
>pdb|3HEA|A Chain A, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|B Chain B, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|C Chain C, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|D Chain D, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|E Chain E, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|F Chain F, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
Length = 271
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 98/238 (41%), Gaps = 26/238 (10%)
Query: 27 GVQLFTCRWLPFSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRG 86
G Q++ W + K V+F HG+ ++ + + L+S GY D G GRS
Sbjct: 8 GTQIYFKDW---GSGKPVLF-SHGWPLDADMWEYQM-EYLSSRGYRTIAFDRRGFGRSDQ 62
Query: 87 ARCYIKKFENIVNDCDDFFKSVCAQEEYTD-KARFLYGESMGGA-VTLLLHKKDPSFWNG 144
ND D F + E+ D K L G SMGG V + + + G
Sbjct: 63 PWT--------GNDYDTFADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAG 114
Query: 145 AVLVAPMCKISEKVKPHP--VLVNILTRVEEIIPKWKIVPTKDVIDSAF----KDSIKRE 198
VL+ + I + +P V +++ R + + K + D ++ F K + +
Sbjct: 115 LVLLGAVTPIFGQKPDYPQGVPLDVFARFKTELLKDRAQFISD-FNAPFYGINKGQVVSQ 173
Query: 199 EIRNNKLIYQDKPRLKTALEMLRTSMSLED---SLSKVMIPFFVLHGEADTVTDPEVS 253
++ L LK ++ + T+ + D ++K+ +P V+HG+ D + E +
Sbjct: 174 GVQTQTLQIALLASLKATVDCV-TAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETT 230
>pdb|3BDI|A Chain A, Crystal Structure Of Predicted Cib-Like Hydrolase
(Np_393672.1) From Thermoplasma Acidophilum At 1.45 A
Resolution
Length = 207
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 58/137 (42%), Gaps = 12/137 (8%)
Query: 18 QEEYIRNARGVQLFTCRWLPFSTPKAVVFLCHGYGMECSGFMR-ECGTRLASAGYAVFGI 76
QEE+I + G ++F + + S +++ L HGY + + + + GY V+
Sbjct: 5 QEEFI-DVNGTRVFQRKXVTDSNRRSIA-LFHGYSFTSXDWDKADLFNNYSKIGYNVYAP 62
Query: 77 DYEGHGRSRGARCYIKKFENIVNDCD---DFFKSVCAQEEYTDKARFLYGESMGGAVTLL 133
DY G GRS + Y ++ + + D+ K+ + G S GG +
Sbjct: 63 DYPGFGRSASSEKYGIDRGDLKHAAEFIRDYLKANGVARS------VIXGASXGGGXVIX 116
Query: 134 LHKKDPSFWNGAVLVAP 150
+ P +G + VAP
Sbjct: 117 TTLQYPDIVDGIIAVAP 133
>pdb|2ZJF|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Epoxide
Hydrolase B Complexed With An Inhibitor
Length = 362
Score = 35.4 bits (80), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 40/99 (40%), Gaps = 2/99 (2%)
Query: 18 QEEYIRNARGVQLFTCRWLPFSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGID 77
Q I N RG ++ P +V L HG+ + + LA AGY V ID
Sbjct: 9 QVHRILNCRGTRIHAVADSPPDQQGPLVVLLHGFPESWYSWRHQI-PALAGAGYRVVAID 67
Query: 78 YEGHGRSRGARCY-IKKFENIVNDCDDFFKSVCAQEEYT 115
G+GRS R + + +V D S A++ +
Sbjct: 68 QRGYGRSSKYRVQKAYRIKELVGDVVGVLDSYGAEQAFV 106
>pdb|2E3J|A Chain A, The Crystal Structure Of Epoxide Hydrolase B (Rv1938) From
Mycobacterium Tuberculosis At 2.1 Angstrom
Length = 356
Score = 35.4 bits (80), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 40/99 (40%), Gaps = 2/99 (2%)
Query: 18 QEEYIRNARGVQLFTCRWLPFSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGID 77
Q I N RG ++ P +V L HG+ + + LA AGY V ID
Sbjct: 3 QVHRILNCRGTRIHAVADSPPDQQGPLVVLLHGFPESWYSWRHQI-PALAGAGYRVVAID 61
Query: 78 YEGHGRSRGARCY-IKKFENIVNDCDDFFKSVCAQEEYT 115
G+GRS R + + +V D S A++ +
Sbjct: 62 QRGYGRSSKYRVQKAYRIKELVGDVVGVLDSYGAEQAFV 100
>pdb|3HI4|A Chain A, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|B Chain B, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|C Chain C, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|D Chain D, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|E Chain E, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|F Chain F, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
Length = 271
Score = 34.7 bits (78), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 98/238 (41%), Gaps = 26/238 (10%)
Query: 27 GVQLFTCRWLPFSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRG 86
G Q++ W + K V+F HG+ ++ + + L+S GY D G GRS
Sbjct: 8 GTQIYFKDW---GSGKPVLF-SHGWPLDADMWEYQM-EYLSSRGYRTIAFDRRGFGRSDQ 62
Query: 87 ARCYIKKFENIVNDCDDFFKSVCAQEEYTD-KARFLYGESMGGA-VTLLLHKKDPSFWNG 144
ND D F + E+ D K L G SMGG V + + + G
Sbjct: 63 PWT--------GNDYDTFADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAG 114
Query: 145 AVLVAPMCKISEKVKPHP--VLVNILTRVEEIIPKWKIVPTKDVIDSAF----KDSIKRE 198
VL+ + + + +P V +++ R + + K + D ++ F K + +
Sbjct: 115 LVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLKDRAQFISD-FNAPFYGINKGQVVSQ 173
Query: 199 EIRNNKLIYQDKPRLKTALEMLRTSMSLED---SLSKVMIPFFVLHGEADTVTDPEVS 253
++ L LK ++ + T+ + D ++K+ +P V+HG+ D + E +
Sbjct: 174 GVQTQTLQIALLASLKATVDCV-TAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETT 230
>pdb|1VA4|A Chain A, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|B Chain B, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|C Chain C, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|D Chain D, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|E Chain E, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|F Chain F, Pseudomonas Fluorescens Aryl Esterase
Length = 279
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 98/238 (41%), Gaps = 26/238 (10%)
Query: 27 GVQLFTCRWLPFSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRG 86
G Q++ W + K V+F HG+ ++ + + L+S GY D G GRS
Sbjct: 8 GTQIYFKDW---GSGKPVLF-SHGWLLDADMWEYQM-EYLSSRGYRTIAFDRRGFGRSDQ 62
Query: 87 ARCYIKKFENIVNDCDDFFKSVCAQEEYTD-KARFLYGESMGGA-VTLLLHKKDPSFWNG 144
ND D F + E+ D K L G SMGG V + + + G
Sbjct: 63 PWT--------GNDYDTFADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAG 114
Query: 145 AVLVAPMCKISEKVKPHP--VLVNILTRVEEIIPKWKIVPTKDVIDSAF----KDSIKRE 198
VL+ + + + +P V +++ R + + K + D ++ F K + +
Sbjct: 115 LVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLKDRAQFISD-FNAPFYGINKGQVVSQ 173
Query: 199 EIRNNKLIYQDKPRLKTALEMLRTSMSLED---SLSKVMIPFFVLHGEADTVTDPEVS 253
++ L LK ++ + T+ + D ++K+ +P V+HG+ D + E +
Sbjct: 174 GVQTQTLQIALLASLKATVDCV-TAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETT 230
>pdb|3T4U|A Chain A, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|B Chain B, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|C Chain C, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|D Chain D, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|E Chain E, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|F Chain F, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|A Chain A, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|B Chain B, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|C Chain C, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|D Chain D, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|E Chain E, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|F Chain F, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
Length = 271
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 98/238 (41%), Gaps = 26/238 (10%)
Query: 27 GVQLFTCRWLPFSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRG 86
G Q++ W + K V+F HG+ ++ + + L+S GY D G GRS
Sbjct: 8 GTQIYFKDW---GSGKPVLF-SHGWILDADMWEYQM-EYLSSRGYRTIAFDRRGFGRSDQ 62
Query: 87 ARCYIKKFENIVNDCDDFFKSVCAQEEYTD-KARFLYGESMGGA-VTLLLHKKDPSFWNG 144
ND D F + E+ D K L G SMGG V + + + G
Sbjct: 63 PWT--------GNDYDTFADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAG 114
Query: 145 AVLVAPMCKISEKVKPHP--VLVNILTRVEEIIPKWKIVPTKDVIDSAF----KDSIKRE 198
VL+ + + + +P V +++ R + + K + D ++ F K + +
Sbjct: 115 LVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLKDRAQFISD-FNAPFYGINKGQVVSQ 173
Query: 199 EIRNNKLIYQDKPRLKTALEMLRTSMSLED---SLSKVMIPFFVLHGEADTVTDPEVS 253
++ L LK ++ + T+ + D ++K+ +P V+HG+ D + E +
Sbjct: 174 GVQTQTLQIALLASLKATVDCV-TAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETT 230
>pdb|3IA2|A Chain A, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|B Chain B, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|C Chain C, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|D Chain D, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|E Chain E, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|F Chain F, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
Length = 271
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 98/238 (41%), Gaps = 26/238 (10%)
Query: 27 GVQLFTCRWLPFSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRG 86
G Q++ W + K V+F HG+ ++ + + L+S GY D G GRS
Sbjct: 8 GTQIYFKDW---GSGKPVLF-SHGWLLDADMWEYQM-EYLSSRGYRTIAFDRRGFGRSDQ 62
Query: 87 ARCYIKKFENIVNDCDDFFKSVCAQEEYTD-KARFLYGESMGGA-VTLLLHKKDPSFWNG 144
ND D F + E+ D K L G SMGG V + + + G
Sbjct: 63 PWT--------GNDYDTFADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAG 114
Query: 145 AVLVAPMCKISEKVKPHP--VLVNILTRVEEIIPKWKIVPTKDVIDSAF----KDSIKRE 198
VL+ + + + +P V +++ R + + K + D ++ F K + +
Sbjct: 115 LVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLKDRAQFISD-FNAPFYGINKGQVVSQ 173
Query: 199 EIRNNKLIYQDKPRLKTALEMLRTSMSLED---SLSKVMIPFFVLHGEADTVTDPEVS 253
++ L LK ++ + T+ + D ++K+ +P V+HG+ D + E +
Sbjct: 174 GVQTQTLQIALLASLKATVDCV-TAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETT 230
>pdb|1WOM|A Chain A, Crystal Structure Of Rsbq
pdb|1WOM|B Chain B, Crystal Structure Of Rsbq
pdb|1WPR|A Chain A, Crystal Structure Of Rsbq Inhibited By Pmsf
pdb|1WPR|B Chain B, Crystal Structure Of Rsbq Inhibited By Pmsf
Length = 271
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 89/228 (39%), Gaps = 15/228 (6%)
Query: 73 VFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTL 132
V DY G G S + +++ + D VC E K G S+G + +
Sbjct: 49 VILFDYVGSGHSDLRAYDLNRYQTLDGYAQDVL-DVC--EALDLKETVFVGHSVGALIGM 105
Query: 133 LLHKKDPSFWNGAVLVAPM-CKISEKVKPH-----PVLVNILTRVEEIIPKWKIVPTKDV 186
L + P ++ V+V P C +++ + + L+ +L +E+ W V V
Sbjct: 106 LASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNYIGWATVFAATV 165
Query: 187 IDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADT 246
++ + IK E ++ D + + S ED LSKV +P +L D
Sbjct: 166 LNQPDRPEIKEE--LESRFCSTDPVIARQFAKAAFFSDHRED-LSKVTVPSLILQCADDI 222
Query: 247 VTDPEVSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDII 294
+ V K +++ ++K H PDE I ++ GD +
Sbjct: 223 IAPATVGKYMHQHLPY--SSLKQMEARGHCPHMSHPDETIQLI-GDYL 267
>pdb|1C4X|A Chain A, 2-Hydroxy-6-Oxo-6-Phenylhexa-2,4-Dienoate Hydrolase (Bphd)
From Rhodococcus Sp. Strain Rha1
Length = 285
Score = 31.2 bits (69), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 90/252 (35%), Gaps = 24/252 (9%)
Query: 39 STPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIV 98
+P V+ G G + R LA + V D G G+S Y + V
Sbjct: 28 QSPAVVLLHGAGPGAHAASNWRPIIPDLAE-NFFVVAPDLIGFGQSEYPETYPGHIMSWV 86
Query: 99 NDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKV 158
+ + + + + + G SMGGAVTL L + P ++ L+ +
Sbjct: 87 GMRVE--QILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNAR 144
Query: 159 KPHPVLVNILTRVEEIIPKWKIVPTKDVIDSAFKDSIK---REEIRNNKLIYQDKPRLKT 215
P L R+ ++ P +++I S D EEI ++ + P ++
Sbjct: 145 PPE------LARLLAFYADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRR 198
Query: 216 ALEMLRTSMSLEDSLSKVMIP----------FFVLHGEADTVTDPEVSKALYERASSRDK 265
E++ SM + + ++IP V HG D + + S L + +
Sbjct: 199 IQEVMFESM--KAGMESLVIPPATLGRLPHDVLVFHGRQDRIVPLDTSLYLTKHLKHAEL 256
Query: 266 TIKLYPGMWHAL 277
+ G W L
Sbjct: 257 VVLDRCGHWAQL 268
>pdb|3LLC|A Chain A, Crystal Structure Of Putative Hydrolase (Yp_002548124.1)
From Agrobacterium Vitis S4 At 1.80 A Resolution
Length = 270
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 50/128 (39%), Gaps = 30/128 (23%)
Query: 32 TCRWLPFSTPKAVVFLCHGYGMECSGFMR-ECGTRLASAGYAVFGIDYEGHGRSRGA--R 88
TC WL GY + +G E AS G DY GHG S GA
Sbjct: 39 TCIWL------------GGYRSDXTGTKALEXDDLAASLGVGAIRFDYSGHGASGGAFRD 86
Query: 89 CYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKK------DPSFW 142
I ++ +++ + + + L G S GG + L L ++ +P+
Sbjct: 87 GTISRW---------LEEALAVLDHFKPEKAILVGSSXGGWIALRLIQELKARHDNPTQV 137
Query: 143 NGAVLVAP 150
+G VL+AP
Sbjct: 138 SGXVLIAP 145
>pdb|3H2G|A Chain A, Crystal Structure Of A Rice Cell Wall Degrading Esterase
Lipa From Xanthomonas Oryzae
pdb|3H2J|A Chain A, Crystal Structure Of The Rice Cell Wall Degrading Esterase
Lipa From Xanthomonas Oryzae
pdb|3H2K|A Chain A, Crystal Structure Of A Ligand-Bound Form Of The Rice Cell
Wall Degrading Esterase Lipa From Xanthomonas Oryzae
Length = 397
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/21 (66%), Positives = 15/21 (71%)
Query: 64 TRLASAGYAVFGIDYEGHGRS 84
TRLAS GY V G DY G G+S
Sbjct: 111 TRLASQGYVVVGSDYLGLGKS 131
>pdb|3H2H|A Chain A, Crystal Structure Of G231f Mutant Of The Rice Cell Wall
Degrading Esterase Lipa From Xanthomonas Oryzae
Length = 397
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/21 (66%), Positives = 15/21 (71%)
Query: 64 TRLASAGYAVFGIDYEGHGRS 84
TRLAS GY V G DY G G+S
Sbjct: 111 TRLASQGYVVVGSDYLGLGKS 131
>pdb|3H2I|A Chain A, Crystal Structure Of N228w Mutant Of The Rice Cell Wall
Degrading Esterase Lipa From Xanthomonas Oryzae
Length = 397
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/21 (66%), Positives = 15/21 (71%)
Query: 64 TRLASAGYAVFGIDYEGHGRS 84
TRLAS GY V G DY G G+S
Sbjct: 111 TRLASQGYVVVGSDYLGLGKS 131
>pdb|3IKE|A Chain A, Crystal Structure Of 2c-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase From Burkholderia
Pseudomallei With Cytosine
pdb|3IKE|B Chain B, Crystal Structure Of 2c-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase From Burkholderia
Pseudomallei With Cytosine
pdb|3IKE|C Chain C, Crystal Structure Of 2c-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase From Burkholderia
Pseudomallei With Cytosine
pdb|3IKF|A Chain A, Crystal Structure Of 2c-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase From Burkholderia
Pseudomallei With Fol Fragment 717,
Imidazo[2,,1-B][1,3]thiazol-6-Ylmethanol
pdb|3IKF|B Chain B, Crystal Structure Of 2c-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase From Burkholderia
Pseudomallei With Fol Fragment 717,
Imidazo[2,,1-B][1,3]thiazol-6-Ylmethanol
pdb|3IKF|C Chain C, Crystal Structure Of 2c-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase From Burkholderia
Pseudomallei With Fol Fragment 717,
Imidazo[2,,1-B][1,3]thiazol-6-Ylmethanol
Length = 166
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 52 GMECSGFMRECGTRLASAGYAVFGID 77
G + +REC +R+A AG+A+ +D
Sbjct: 76 GADSRALLRECASRVAQAGFAIRNVD 101
>pdb|3CN7|A Chain A, Crystal Structure Analysis Of The Carboxylesterase Pa3859
From Pseudomonas Aeruginosa Pao1- Monoclinic Crystal
Form
pdb|3CN7|B Chain B, Crystal Structure Analysis Of The Carboxylesterase Pa3859
From Pseudomonas Aeruginosa Pao1- Monoclinic Crystal
Form
pdb|3CN7|C Chain C, Crystal Structure Analysis Of The Carboxylesterase Pa3859
From Pseudomonas Aeruginosa Pao1- Monoclinic Crystal
Form
pdb|3CN7|D Chain D, Crystal Structure Analysis Of The Carboxylesterase Pa3859
From Pseudomonas Aeruginosa Pao1- Monoclinic Crystal
Form
pdb|3CN9|A Chain A, Crystal Structure Analysis Of The Carboxylesterase Pa3859
From Pseudomonas Aeruginosa Pao1- Orthorhombic Crystal
Form
pdb|3CN9|B Chain B, Crystal Structure Analysis Of The Carboxylesterase Pa3859
From Pseudomonas Aeruginosa Pao1- Orthorhombic Crystal
Form
Length = 226
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 7/67 (10%)
Query: 235 IPFFVLHGEADTVTDPEVSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDII 294
IP LHG D V DP + +A ++ ++ + WH G +I DI
Sbjct: 167 IPVLHLHGSQDDVVDPALGRAAHDALQAQGVEVG-----WHDYPMGHEVSLEEI--HDIG 219
Query: 295 AWLDERM 301
AWL +R+
Sbjct: 220 AWLRKRL 226
>pdb|3F0D|A Chain A, High Resolution Crystal Structure Of
2c-Methyl-D-Erythritol 2,4- Cyclodiphosphatase Synthase
From Burkholderia Pseudomallei
pdb|3F0D|B Chain B, High Resolution Crystal Structure Of
2c-Methyl-D-Erythritol 2,4- Cyclodiphosphatase Synthase
From Burkholderia Pseudomallei
pdb|3F0D|C Chain C, High Resolution Crystal Structure Of
2c-Methyl-D-Erythritol 2,4- Cyclodiphosphatase Synthase
From Burkholderia Pseudomallei
pdb|3F0D|D Chain D, High Resolution Crystal Structure Of
2c-Methyl-D-Erythritol 2,4- Cyclodiphosphatase Synthase
From Burkholderia Pseudomallei
pdb|3F0D|E Chain E, High Resolution Crystal Structure Of
2c-Methyl-D-Erythritol 2,4- Cyclodiphosphatase Synthase
From Burkholderia Pseudomallei
pdb|3F0D|F Chain F, High Resolution Crystal Structure Of
2c-Methyl-D-Erythritol 2,4- Cyclodiphosphatase Synthase
From Burkholderia Pseudomallei
pdb|3F0E|A Chain A, Crystal Structure Of 2c-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase From Burkholderia
Pseudomallei
pdb|3F0E|B Chain B, Crystal Structure Of 2c-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase From Burkholderia
Pseudomallei
pdb|3F0E|C Chain C, Crystal Structure Of 2c-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase From Burkholderia
Pseudomallei
pdb|3F0F|A Chain A, Co-Crystal Structure Of 2c-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase From Burkholderia
Pseudomallei With Hydrolyzed Cdp
pdb|3F0F|B Chain B, Co-Crystal Structure Of 2c-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase From Burkholderia
Pseudomallei With Hydrolyzed Cdp
pdb|3F0F|C Chain C, Co-Crystal Structure Of 2c-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase From Burkholderia
Pseudomallei With Hydrolyzed Cdp
pdb|3F0G|A Chain A, Co-Crystal Structure Of 2c-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase With Cmp
pdb|3F0G|B Chain B, Co-Crystal Structure Of 2c-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase With Cmp
pdb|3F0G|C Chain C, Co-Crystal Structure Of 2c-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase With Cmp
pdb|3F0G|D Chain D, Co-Crystal Structure Of 2c-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase With Cmp
pdb|3F0G|E Chain E, Co-Crystal Structure Of 2c-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase With Cmp
pdb|3F0G|F Chain F, Co-Crystal Structure Of 2c-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase With Cmp
pdb|3IEQ|A Chain A, Crystal Structure Of 2c-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase From Burkholderia
Pseudomallei With Cytidine
pdb|3IEQ|B Chain B, Crystal Structure Of 2c-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase From Burkholderia
Pseudomallei With Cytidine
pdb|3IEQ|C Chain C, Crystal Structure Of 2c-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase From Burkholderia
Pseudomallei With Cytidine
pdb|3IEW|A Chain A, Crystal Structure Of 2c-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase From Burkholderia
Pseudomallei With Bound Ctp And Cdp
pdb|3IEW|B Chain B, Crystal Structure Of 2c-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase From Burkholderia
Pseudomallei With Bound Ctp And Cdp
pdb|3IEW|C Chain C, Crystal Structure Of 2c-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase From Burkholderia
Pseudomallei With Bound Ctp And Cdp
pdb|3JVH|A Chain A, Crystal Structure Of
2c-Methyl-D-Erythritol-2,4-Cyclodiphosphate Synthase
From Burkholderia Pseudomallei With Fol Fragment 8395
pdb|3JVH|B Chain B, Crystal Structure Of
2c-Methyl-D-Erythritol-2,4-Cyclodiphosphate Synthase
From Burkholderia Pseudomallei With Fol Fragment 8395
pdb|3JVH|C Chain C, Crystal Structure Of
2c-Methyl-D-Erythritol-2,4-Cyclodiphosphate Synthase
From Burkholderia Pseudomallei With Fol Fragment 8395
pdb|3K14|A Chain A, Co-Crystal Structure Of 2c-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase From Burkholderia
Pseudomallei With Fol Fragment 535, Ethyl
3-Methyl-5,6-Dihydroimidazo[2,1-B][1,
3]thiazole-2-Carboxylate
pdb|3K14|B Chain B, Co-Crystal Structure Of 2c-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase From Burkholderia
Pseudomallei With Fol Fragment 535, Ethyl
3-Methyl-5,6-Dihydroimidazo[2,1-B][1,
3]thiazole-2-Carboxylate
pdb|3K14|C Chain C, Co-Crystal Structure Of 2c-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase From Burkholderia
Pseudomallei With Fol Fragment 535, Ethyl
3-Methyl-5,6-Dihydroimidazo[2,1-B][1,
3]thiazole-2-Carboxylate
pdb|3K2X|A Chain A, Crystal Structure Of 2c-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase From Burkholderia
Pseudomallei In Complex With 5'-Iodo- Cytosine
pdb|3K2X|B Chain B, Crystal Structure Of 2c-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase From Burkholderia
Pseudomallei In Complex With 5'-Iodo- Cytosine
pdb|3K2X|C Chain C, Crystal Structure Of 2c-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase From Burkholderia
Pseudomallei In Complex With 5'-Iodo- Cytosine
pdb|3KE1|A Chain A, Crystal Structure Of 2c-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase From Burkholderia
Pseudomallei In Complex With A Fragment- Nucleoside
Fusion D000161829
pdb|3KE1|B Chain B, Crystal Structure Of 2c-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase From Burkholderia
Pseudomallei In Complex With A Fragment- Nucleoside
Fusion D000161829
pdb|3KE1|C Chain C, Crystal Structure Of 2c-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase From Burkholderia
Pseudomallei In Complex With A Fragment- Nucleoside
Fusion D000161829
pdb|3MBM|A Chain A, Crystal Structure Of 2c-methyl-d-erythritol
2,4-cyclodiphosphate Synthase From Burkholderia
Pseudomallei With Cytosine And Fol Fragment 717,
Imidazo[2,1-b][1,3]thiazol-6-ylmethanol
pdb|3MBM|B Chain B, Crystal Structure Of 2c-methyl-d-erythritol
2,4-cyclodiphosphate Synthase From Burkholderia
Pseudomallei With Cytosine And Fol Fragment 717,
Imidazo[2,1-b][1,3]thiazol-6-ylmethanol
pdb|3MBM|C Chain C, Crystal Structure Of 2c-methyl-d-erythritol
2,4-cyclodiphosphate Synthase From Burkholderia
Pseudomallei With Cytosine And Fol Fragment 717,
Imidazo[2,1-b][1,3]thiazol-6-ylmethanol
pdb|3P0Z|A Chain A, Crystal Structure Of 2-C-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase From Burkholderia
Pseudomallei With Cytidine And Fol955, 4-
(1h-Imidazol)-1-Yl)phenol
pdb|3P0Z|B Chain B, Crystal Structure Of 2-C-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase From Burkholderia
Pseudomallei With Cytidine And Fol955, 4-
(1h-Imidazol)-1-Yl)phenol
pdb|3P0Z|C Chain C, Crystal Structure Of 2-C-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase From Burkholderia
Pseudomallei With Cytidine And Fol955, 4-
(1h-Imidazol)-1-Yl)phenol
pdb|3P10|A Chain A, Crystal Structure Of 2-C-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase From Burkholderia
Pseudomallei With Cytidine And Fol694, 2-
(Thiophen-2-Yl)phenyl Methanol
pdb|3P10|B Chain B, Crystal Structure Of 2-C-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase From Burkholderia
Pseudomallei With Cytidine And Fol694, 2-
(Thiophen-2-Yl)phenyl Methanol
pdb|3P10|C Chain C, Crystal Structure Of 2-C-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase From Burkholderia
Pseudomallei With Cytidine And Fol694, 2-
(Thiophen-2-Yl)phenyl Methanol
pdb|3Q8H|A Chain A, Crystal Structure Of 2c-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase From Burkholderia
Pseudomallei In Complex With Cytidine Derivative
Ebsi01028
pdb|3Q8H|B Chain B, Crystal Structure Of 2c-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase From Burkholderia
Pseudomallei In Complex With Cytidine Derivative
Ebsi01028
pdb|3Q8H|C Chain C, Crystal Structure Of 2c-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase From Burkholderia
Pseudomallei In Complex With Cytidine Derivative
Ebsi01028
pdb|3QHD|A Chain A, Crystal Structure Of 2-C-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase From Burkholderia
Pseudomallei Bound To Cytidine, Fol795 And Fol955
pdb|3QHD|B Chain B, Crystal Structure Of 2-C-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase From Burkholderia
Pseudomallei Bound To Cytidine, Fol795 And Fol955
pdb|3QHD|C Chain C, Crystal Structure Of 2-C-Methyl-D-Erythritol
2,4-Cyclodiphosphate Synthase From Burkholderia
Pseudomallei Bound To Cytidine, Fol795 And Fol955
Length = 183
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 52 GMECSGFMRECGTRLASAGYAVFGID 77
G + +REC +R+A AG+A+ +D
Sbjct: 93 GADSRALLRECASRVAQAGFAIRNVD 118
>pdb|1S8O|A Chain A, Human Soluble Epoxide Hydrolase
pdb|1VJ5|A Chain A, Human Soluble Epoxide Hydrolase- N-Cyclohexyl-N'-(4-
Iodophenyl)urea Complex
pdb|1ZD2|P Chain P, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Ethanoic Acid Complex
pdb|1ZD3|A Chain A, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Butyric Acid Complex
pdb|1ZD4|A Chain A, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Hexanoic Acid Complex
pdb|1ZD5|A Chain A, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Heptanoic Acid Complex
pdb|3I1Y|A Chain A, Crystal Structure Of Soluble Epoxide Hydrolase
pdb|3I28|A Chain A, Crystal Structure Of Soluble Epoxide Hydrolase
pdb|3KOO|A Chain A, Crystal Structure Of Soluble Epoxide Hydrolase
pdb|3OTQ|A Chain A, Soluble Epoxide Hydrolase In Complex With Pyrazole
Antagonist
pdb|4HAI|A Chain A, Crystal Structure Of Human Soluble Epoxide Hydrolase
Complexed With N-
Cycloheptyl-1-(mesitylsulfonyl)piperidine-4-carboxamide
Length = 555
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 45 VFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRS 84
V LCHG+ + + LA AGY V +D +G+G S
Sbjct: 261 VCLCHGFPESWYSWRYQIPA-LAQAGYRVLAMDMKGYGES 299
>pdb|1IMJ|A Chain A, Crystal Structure Of The Human Ccg1/tafii250-interacting
Factor B (cib)
Length = 210
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 50/138 (36%), Gaps = 9/138 (6%)
Query: 18 QEEYIRNARGVQLFTCRWLPFS-TPKAVVFLCHGYGMECSGFMRECGT--RLASAGYAVF 74
Q E +G LF LP S + V L HG + + GT RLA AGY
Sbjct: 7 QREGTIQVQGQALFFREALPGSGQARFSVLLLHGIRFSSETW-QNLGTLHRLAQAGYRAV 65
Query: 75 GIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLL 134
ID G G S+ A E F +V E + S+ G +L
Sbjct: 66 AIDLPGLGHSKEAAAPAPIGELAPG---SFLAAVVDALELGPPV--VISPSLSGMYSLPF 120
Query: 135 HKKDPSFWNGAVLVAPMC 152
S G V VAP+C
Sbjct: 121 LTAPGSQLPGFVPVAPIC 138
>pdb|3ANS|A Chain A, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
pdb|3ANS|B Chain B, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
pdb|3ANT|A Chain A, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
pdb|3ANT|B Chain B, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
Length = 336
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 45 VFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRS 84
V LCHG+ + + LA AGY V +D +G+G S
Sbjct: 42 VCLCHGFPESWYSWRYQIPA-LAQAGYRVLAMDMKGYGES 80
>pdb|3PDC|A Chain A, Crystal Structure Of Hydrolase Domain Of Human Soluble
Epoxide Hydrolase Complexed With A Benzoxazole
Inhibitor
pdb|3PDC|B Chain B, Crystal Structure Of Hydrolase Domain Of Human Soluble
Epoxide Hydrolase Complexed With A Benzoxazole
Inhibitor
Length = 344
Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 44 VVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRS 84
V LCHG+ + + LA AGY V +D +G+G S
Sbjct: 56 AVCLCHGFPESWYSWRYQIPA-LAQAGYRVLAMDMKGYGES 95
>pdb|2WGH|A Chain A, Human Ribonucleotide Reductase R1 Subunit (Rrm1) In
Complex With Datp And Mg.
pdb|2WGH|B Chain B, Human Ribonucleotide Reductase R1 Subunit (Rrm1) In
Complex With Datp And Mg
Length = 676
Score = 28.5 bits (62), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 18/99 (18%)
Query: 178 WKIVPTKDVID-SAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIP 236
W + PT D+ D K+ I + IRN+ LI P TA ++L + S+E S +
Sbjct: 498 WNVTPT-DLWDWKVLKEKIAKYGIRNSLLI-APMPTASTA-QILGNNESIEPYTSNIYTR 554
Query: 237 FFVLHGEADTVTDPEVSKALYERASSRDKTIKLYPGMWH 275
VL GE V +P + K L ER G+WH
Sbjct: 555 -RVLSGEFQIV-NPHLLKDLTER------------GLWH 579
>pdb|3HNC|A Chain A, Crystal Structure Of Human Ribonucleotide Reductase 1
Bound To The Effector Ttp
pdb|3HNC|B Chain B, Crystal Structure Of Human Ribonucleotide Reductase 1
Bound To The Effector Ttp
pdb|3HND|A Chain A, Crystal Structure Of Human Ribonucleotide Reductase 1
Bound To The Effector Ttp And Substrate Gdp
pdb|3HND|B Chain B, Crystal Structure Of Human Ribonucleotide Reductase 1
Bound To The Effector Ttp And Substrate Gdp
pdb|3HNE|A Chain A, Crystal Structure Of Human Ribonucleotide Reductase 1
Bound To The Effectors Ttp And Atp
pdb|3HNE|B Chain B, Crystal Structure Of Human Ribonucleotide Reductase 1
Bound To The Effectors Ttp And Atp
pdb|3HNF|A Chain A, Crystal Structure Of Human Ribonucleotide Reductase 1
Bound To The Effectors Ttp And Datp
pdb|3HNF|B Chain B, Crystal Structure Of Human Ribonucleotide Reductase 1
Bound To The Effectors Ttp And Datp
Length = 792
Score = 28.5 bits (62), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 18/99 (18%)
Query: 178 WKIVPTKDVID-SAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIP 236
W + PT D+ D K+ I + IRN+ LI P TA ++L + S+E S +
Sbjct: 571 WNVTPT-DLWDWKVLKEKIAKYGIRNSLLI-APMPTASTA-QILGNNESIEPYTSNIYTR 627
Query: 237 FFVLHGEADTVTDPEVSKALYERASSRDKTIKLYPGMWH 275
VL GE V +P + K L ER G+WH
Sbjct: 628 -RVLSGEFQIV-NPHLLKDLTER------------GLWH 652
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,630,590
Number of Sequences: 62578
Number of extensions: 424847
Number of successful extensions: 1026
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 992
Number of HSP's gapped (non-prelim): 44
length of query: 357
length of database: 14,973,337
effective HSP length: 100
effective length of query: 257
effective length of database: 8,715,537
effective search space: 2239893009
effective search space used: 2239893009
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)