Query 018375
Match_columns 357
No_of_seqs 522 out of 2430
Neff 11.6
Searched_HMMs 46136
Date Fri Mar 29 08:29:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018375.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018375hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1455 Lysophospholipase [Lip 100.0 2E-44 4.3E-49 279.2 27.6 289 12-300 22-312 (313)
2 PLN02385 hydrolase; alpha/beta 100.0 2E-41 4.3E-46 288.2 31.5 292 11-302 55-347 (349)
3 PLN02298 hydrolase, alpha/beta 100.0 1.1E-39 2.5E-44 275.9 31.7 292 14-305 29-322 (330)
4 PHA02857 monoglyceride lipase; 100.0 9.7E-36 2.1E-40 246.2 30.0 269 21-301 4-274 (276)
5 COG2267 PldB Lysophospholipase 100.0 3.3E-34 7.2E-39 234.8 27.0 286 14-303 6-297 (298)
6 PLN02652 hydrolase; alpha/beta 100.0 1.2E-33 2.6E-38 240.5 30.4 278 15-303 108-390 (395)
7 PRK10749 lysophospholipase L2; 100.0 1.8E-33 3.8E-38 237.2 29.5 278 17-300 30-329 (330)
8 PLN02824 hydrolase, alpha/beta 100.0 1.1E-33 2.3E-38 235.9 22.4 262 22-300 12-294 (294)
9 TIGR02240 PHA_depoly_arom poly 100.0 5.2E-33 1.1E-37 229.5 23.0 260 23-303 7-269 (276)
10 PRK03592 haloalkane dehalogena 100.0 1.6E-32 3.6E-37 228.9 23.6 262 23-302 12-291 (295)
11 PRK00870 haloalkane dehalogena 100.0 1.9E-32 4.1E-37 229.1 22.4 254 28-300 34-301 (302)
12 PLN03087 BODYGUARD 1 domain co 100.0 3.8E-32 8.2E-37 233.9 23.9 264 21-299 179-478 (481)
13 KOG4178 Soluble epoxide hydrol 100.0 7.2E-32 1.6E-36 213.2 23.4 269 12-300 16-320 (322)
14 PRK10673 acyl-CoA esterase; Pr 100.0 1.5E-31 3.2E-36 219.0 22.0 249 29-299 2-254 (255)
15 PLN02965 Probable pheophorbida 100.0 5.5E-32 1.2E-36 220.7 18.9 237 44-300 5-253 (255)
16 PLN02679 hydrolase, alpha/beta 100.0 1E-31 2.3E-36 228.7 21.0 258 25-299 68-356 (360)
17 TIGR01607 PST-A Plasmodium sub 100.0 7.1E-31 1.5E-35 220.5 25.4 269 22-298 2-331 (332)
18 PRK03204 haloalkane dehalogena 100.0 2.3E-31 4.9E-36 220.0 21.7 259 15-297 12-285 (286)
19 PLN03084 alpha/beta hydrolase 100.0 2E-30 4.3E-35 219.3 24.7 268 13-298 100-382 (383)
20 TIGR03611 RutD pyrimidine util 100.0 7.1E-31 1.5E-35 215.3 19.9 252 30-298 1-256 (257)
21 PRK10349 carboxylesterase BioH 100.0 3.8E-31 8.3E-36 216.3 17.9 241 30-298 4-254 (256)
22 TIGR03056 bchO_mg_che_rel puta 100.0 2.5E-30 5.4E-35 214.6 22.7 258 21-298 9-278 (278)
23 TIGR03343 biphenyl_bphD 2-hydr 100.0 1.1E-30 2.4E-35 217.0 20.4 250 27-298 19-281 (282)
24 PRK06489 hypothetical protein; 100.0 5.9E-30 1.3E-34 218.5 23.8 269 16-301 35-358 (360)
25 PLN02578 hydrolase 100.0 1.1E-29 2.3E-34 216.3 22.9 255 21-298 69-353 (354)
26 PLN02511 hydrolase 100.0 1.8E-28 4E-33 210.0 24.7 282 14-304 68-369 (388)
27 TIGR01250 pro_imino_pep_2 prol 100.0 1.1E-28 2.3E-33 205.9 22.4 260 23-298 7-288 (288)
28 PRK08775 homoserine O-acetyltr 100.0 1E-29 2.3E-34 215.7 16.4 255 26-300 44-339 (343)
29 PRK07581 hypothetical protein; 100.0 8.4E-29 1.8E-33 210.3 21.3 261 25-302 23-338 (339)
30 KOG4409 Predicted hydrolase/ac 100.0 6.1E-29 1.3E-33 197.1 18.7 276 14-299 62-363 (365)
31 PRK11126 2-succinyl-6-hydroxy- 100.0 2.3E-29 5.1E-34 204.2 17.0 227 42-299 2-241 (242)
32 PRK13604 luxD acyl transferase 100.0 3.6E-28 7.9E-33 195.0 22.9 244 17-303 9-262 (307)
33 COG1647 Esterase/lipase [Gener 100.0 1.7E-28 3.7E-33 181.3 18.7 228 42-298 15-242 (243)
34 TIGR02427 protocat_pcaD 3-oxoa 100.0 3.2E-29 6.9E-34 204.7 16.3 245 30-298 2-251 (251)
35 TIGR01392 homoserO_Ac_trn homo 100.0 4.2E-29 9E-34 212.7 17.4 260 24-298 12-351 (351)
36 PLN02211 methyl indole-3-aceta 100.0 9E-29 2E-33 202.5 18.0 252 25-299 4-269 (273)
37 PF12697 Abhydrolase_6: Alpha/ 100.0 3.5E-29 7.5E-34 201.3 14.9 217 45-284 1-224 (228)
38 TIGR01738 bioH putative pimelo 100.0 1.3E-28 2.9E-33 200.3 18.0 231 42-297 4-245 (245)
39 PRK00175 metX homoserine O-ace 100.0 2.1E-28 4.6E-33 209.7 20.0 264 26-302 31-376 (379)
40 PLN02894 hydrolase, alpha/beta 100.0 2.6E-27 5.7E-32 203.6 23.6 261 29-304 93-389 (402)
41 KOG1454 Predicted hydrolase/ac 100.0 3.4E-28 7.4E-33 201.3 16.9 271 18-301 26-325 (326)
42 PRK05077 frsA fermentation/res 100.0 6.8E-27 1.5E-31 200.9 25.4 242 15-301 166-413 (414)
43 TIGR03695 menH_SHCHC 2-succiny 100.0 9.9E-28 2.1E-32 195.7 18.2 239 42-298 1-251 (251)
44 TIGR01249 pro_imino_pep_1 prol 100.0 8.8E-27 1.9E-31 194.9 21.2 263 19-300 6-305 (306)
45 PRK14875 acetoin dehydrogenase 100.0 2E-27 4.4E-32 205.2 15.1 242 25-299 116-370 (371)
46 PRK10985 putative hydrolase; P 99.9 2.5E-25 5.5E-30 187.1 25.5 277 15-301 29-321 (324)
47 TIGR03100 hydr1_PEP hydrolase, 99.9 2.4E-25 5.1E-30 182.6 22.2 249 24-298 8-273 (274)
48 KOG4391 Predicted alpha/beta h 99.9 1.2E-25 2.6E-30 165.2 15.8 237 11-303 48-285 (300)
49 PLN02980 2-oxoglutarate decarb 99.9 2.1E-25 4.6E-30 219.6 21.2 246 41-303 1370-1642(1655)
50 PRK10566 esterase; Provisional 99.9 1.9E-24 4.1E-29 176.0 21.7 214 40-301 25-249 (249)
51 PLN02872 triacylglycerol lipas 99.9 6.5E-25 1.4E-29 186.2 19.1 281 13-303 40-392 (395)
52 PRK06765 homoserine O-acetyltr 99.9 1.5E-24 3.2E-29 184.1 20.5 262 26-299 39-387 (389)
53 PRK05855 short chain dehydroge 99.9 1.1E-24 2.4E-29 199.4 21.2 264 20-302 5-294 (582)
54 KOG1552 Predicted alpha/beta h 99.9 4E-25 8.8E-30 168.8 15.2 221 16-303 34-255 (258)
55 KOG2382 Predicted alpha/beta h 99.9 5.1E-24 1.1E-28 169.0 19.6 260 28-300 36-313 (315)
56 TIGR01836 PHA_synth_III_C poly 99.9 3.2E-23 6.9E-28 176.5 20.1 262 26-299 46-349 (350)
57 COG1506 DAP2 Dipeptidyl aminop 99.9 1.9E-23 4.1E-28 189.1 19.4 248 14-303 362-619 (620)
58 KOG2984 Predicted hydrolase [G 99.9 5.4E-24 1.2E-28 154.8 11.9 247 24-300 27-276 (277)
59 PF12695 Abhydrolase_5: Alpha/ 99.9 4.3E-22 9.4E-27 148.2 16.0 145 44-276 1-145 (145)
60 COG0429 Predicted hydrolase of 99.9 5E-21 1.1E-25 151.6 21.2 281 14-302 46-342 (345)
61 PRK11071 esterase YqiA; Provis 99.9 1.1E-21 2.4E-26 150.9 17.2 185 43-298 2-189 (190)
62 PF01738 DLH: Dienelactone hyd 99.9 2.3E-21 4.9E-26 154.1 18.6 200 31-301 2-218 (218)
63 PRK11460 putative hydrolase; P 99.9 3.8E-21 8.3E-26 153.2 19.0 186 37-303 11-211 (232)
64 PF00561 Abhydrolase_1: alpha/ 99.9 1.5E-22 3.3E-27 163.0 10.4 212 71-294 1-229 (230)
65 KOG1838 Alpha/beta hydrolase [ 99.9 1.8E-20 4E-25 154.1 22.4 283 12-302 88-390 (409)
66 PF00326 Peptidase_S9: Prolyl 99.9 1.6E-21 3.5E-26 154.5 14.8 202 60-303 4-212 (213)
67 KOG4667 Predicted esterase [Li 99.9 7.7E-21 1.7E-25 140.0 16.7 242 17-298 10-256 (269)
68 PF05448 AXE1: Acetyl xylan es 99.9 1.6E-20 3.5E-25 154.9 20.8 250 10-300 49-320 (320)
69 TIGR02821 fghA_ester_D S-formy 99.9 4.7E-20 1E-24 151.4 22.1 225 23-300 20-274 (275)
70 PLN02442 S-formylglutathione h 99.9 5.5E-20 1.2E-24 151.2 21.5 212 22-278 24-264 (283)
71 TIGR01838 PHA_synth_I poly(R)- 99.9 2.9E-20 6.2E-25 162.3 19.3 246 29-283 173-462 (532)
72 TIGR03101 hydr2_PEP hydrolase, 99.9 1.4E-20 3.1E-25 150.9 15.9 126 24-153 6-135 (266)
73 KOG2564 Predicted acetyltransf 99.9 1.7E-20 3.8E-25 143.8 15.3 249 29-301 61-328 (343)
74 COG0412 Dienelactone hydrolase 99.9 1.5E-19 3.3E-24 143.2 21.3 210 20-302 5-235 (236)
75 PRK07868 acyl-CoA synthetase; 99.9 3.7E-20 7.9E-25 177.1 21.2 265 30-305 49-366 (994)
76 PF06500 DUF1100: Alpha/beta h 99.9 1E-19 2.3E-24 150.9 19.2 240 15-301 163-410 (411)
77 PLN00021 chlorophyllase 99.8 4.4E-19 9.6E-24 146.3 20.1 209 28-305 37-288 (313)
78 COG0596 MhpC Predicted hydrola 99.8 6.6E-19 1.4E-23 145.1 18.2 250 26-297 8-279 (282)
79 PRK10162 acetyl esterase; Prov 99.8 4.4E-18 9.5E-23 142.4 22.4 247 15-302 55-317 (318)
80 COG2945 Predicted hydrolase of 99.8 8.2E-19 1.8E-23 127.4 15.4 197 18-298 5-205 (210)
81 PF02230 Abhydrolase_2: Phosph 99.8 1.4E-18 3E-23 137.5 18.3 190 35-301 7-216 (216)
82 TIGR00976 /NonD putative hydro 99.8 5.4E-19 1.2E-23 158.8 17.8 130 23-155 2-135 (550)
83 TIGR01840 esterase_phb esteras 99.8 6.4E-19 1.4E-23 139.2 15.0 121 32-152 1-130 (212)
84 PF06342 DUF1057: Alpha/beta h 99.8 4.6E-18 9.9E-23 132.1 19.0 209 31-260 24-238 (297)
85 PF03096 Ndr: Ndr family; Int 99.8 3.9E-18 8.5E-23 134.4 18.5 260 20-299 2-278 (283)
86 COG3458 Acetyl esterase (deace 99.8 1.1E-18 2.4E-23 133.5 14.8 244 13-300 52-317 (321)
87 KOG2931 Differentiation-relate 99.8 1.8E-17 3.8E-22 128.5 20.5 267 17-300 22-306 (326)
88 PRK10115 protease 2; Provision 99.8 4.9E-18 1.1E-22 154.9 20.6 253 13-303 412-678 (686)
89 COG3208 GrsT Predicted thioest 99.8 1.6E-17 3.5E-22 126.6 15.4 220 40-299 5-235 (244)
90 COG2021 MET2 Homoserine acetyl 99.8 2.6E-17 5.6E-22 133.0 16.3 260 26-299 34-367 (368)
91 PF02129 Peptidase_S15: X-Pro 99.8 2.3E-17 4.9E-22 135.4 15.4 128 26-156 1-140 (272)
92 PF08538 DUF1749: Protein of u 99.8 2.3E-16 4.9E-21 125.8 20.3 246 41-298 32-303 (303)
93 PF02273 Acyl_transf_2: Acyl t 99.8 3.6E-17 7.8E-22 123.4 14.4 229 19-278 4-239 (294)
94 TIGR01839 PHA_synth_II poly(R) 99.8 5.7E-16 1.2E-20 134.0 23.5 240 30-278 201-483 (560)
95 COG4757 Predicted alpha/beta h 99.7 4.1E-17 9E-22 121.9 13.0 259 20-297 8-280 (281)
96 TIGR01849 PHB_depoly_PhaZ poly 99.7 5.5E-16 1.2E-20 130.3 20.4 273 16-300 74-406 (406)
97 COG0400 Predicted esterase [Ge 99.7 1.4E-16 3E-21 122.0 15.2 186 34-300 10-205 (207)
98 PF06821 Ser_hydrolase: Serine 99.7 4.8E-16 1E-20 116.6 14.2 155 45-280 1-157 (171)
99 PF12146 Hydrolase_4: Putative 99.7 6.6E-17 1.4E-21 104.0 8.2 79 27-106 1-79 (79)
100 TIGR03230 lipo_lipase lipoprot 99.7 9.8E-16 2.1E-20 130.3 13.9 114 40-154 39-156 (442)
101 KOG2624 Triglyceride lipase-ch 99.7 7.3E-15 1.6E-19 123.3 18.8 284 14-301 45-399 (403)
102 cd00707 Pancreat_lipase_like P 99.7 4.5E-16 9.7E-21 126.9 10.6 125 26-154 23-149 (275)
103 KOG3043 Predicted hydrolase re 99.7 1.1E-14 2.4E-19 108.8 15.3 184 43-301 40-241 (242)
104 PF10230 DUF2305: Uncharacteri 99.6 3.9E-14 8.5E-19 114.8 19.5 114 42-156 2-126 (266)
105 PF12715 Abhydrolase_7: Abhydr 99.6 1.3E-15 2.7E-20 124.6 10.5 139 13-152 84-260 (390)
106 PF12740 Chlorophyllase2: Chlo 99.6 3.8E-14 8.3E-19 111.1 18.1 181 33-282 7-211 (259)
107 PF05728 UPF0227: Uncharacteri 99.6 8.4E-14 1.8E-18 105.5 17.5 182 45-297 2-186 (187)
108 COG3571 Predicted hydrolase of 99.6 1.6E-13 3.5E-18 96.7 17.5 193 34-299 6-210 (213)
109 KOG1515 Arylacetamide deacetyl 99.6 1E-12 2.2E-17 108.3 24.3 242 20-300 64-335 (336)
110 PRK05371 x-prolyl-dipeptidyl a 99.6 7.9E-15 1.7E-19 134.9 12.7 229 61-304 270-523 (767)
111 PF07859 Abhydrolase_3: alpha/ 99.6 3.7E-14 8E-19 112.4 14.2 102 45-154 1-112 (211)
112 PF00975 Thioesterase: Thioest 99.6 1.6E-13 3.5E-18 110.2 16.9 216 43-297 1-229 (229)
113 KOG2100 Dipeptidyl aminopeptid 99.6 1.1E-13 2.5E-18 127.0 17.6 230 26-303 506-750 (755)
114 PF10503 Esterase_phd: Esteras 99.6 7.1E-14 1.5E-18 108.4 13.4 122 30-152 1-132 (220)
115 COG0657 Aes Esterase/lipase [L 99.6 1E-12 2.3E-17 110.4 21.7 235 24-298 58-308 (312)
116 KOG2281 Dipeptidyl aminopeptid 99.6 4.4E-13 9.6E-18 114.8 17.6 232 18-299 614-866 (867)
117 KOG2565 Predicted hydrolases o 99.5 9.1E-13 2E-17 105.9 15.4 121 23-150 129-262 (469)
118 PF03403 PAF-AH_p_II: Platelet 99.5 7.3E-13 1.6E-17 112.4 15.6 190 40-303 98-361 (379)
119 COG2936 Predicted acyl esteras 99.5 8.4E-13 1.8E-17 114.1 15.5 138 15-155 17-162 (563)
120 PF09752 DUF2048: Uncharacteri 99.5 5.5E-12 1.2E-16 102.5 19.0 246 30-297 77-346 (348)
121 COG3243 PhaC Poly(3-hydroxyalk 99.5 3.2E-12 7E-17 105.2 17.2 251 41-300 106-399 (445)
122 TIGR03502 lipase_Pla1_cef extr 99.5 5.2E-13 1.1E-17 120.9 13.2 116 21-137 421-575 (792)
123 PF08840 BAAT_C: BAAT / Acyl-C 99.5 3.8E-13 8.2E-18 105.5 10.5 180 99-302 4-212 (213)
124 COG4099 Predicted peptidase [G 99.4 3.7E-12 8E-17 99.4 14.0 124 24-153 168-305 (387)
125 KOG4627 Kynurenine formamidase 99.4 1.2E-12 2.6E-17 96.4 10.6 209 29-296 55-267 (270)
126 PF07224 Chlorophyllase: Chlor 99.4 1.6E-11 3.4E-16 94.5 15.5 118 29-155 32-160 (307)
127 COG3545 Predicted esterase of 99.4 2.4E-11 5.3E-16 87.9 15.3 175 43-299 3-178 (181)
128 PF06028 DUF915: Alpha/beta hy 99.4 2.9E-11 6.2E-16 96.2 16.9 207 41-297 10-252 (255)
129 PF06057 VirJ: Bacterial virul 99.4 7.1E-12 1.5E-16 92.9 12.0 102 43-153 3-108 (192)
130 KOG3975 Uncharacterized conser 99.4 3.9E-11 8.5E-16 91.3 14.2 264 24-297 7-300 (301)
131 KOG2112 Lysophospholipase [Lip 99.4 2.7E-11 6E-16 90.4 12.9 182 42-299 3-203 (206)
132 COG4188 Predicted dienelactone 99.3 2.6E-12 5.6E-17 104.7 7.6 224 27-284 49-302 (365)
133 PTZ00472 serine carboxypeptida 99.3 4E-10 8.6E-15 98.6 21.4 137 16-154 46-218 (462)
134 COG3509 LpqC Poly(3-hydroxybut 99.3 3.1E-10 6.7E-15 89.3 17.8 128 23-152 40-179 (312)
135 PF03959 FSH1: Serine hydrolas 99.3 4.1E-11 8.8E-16 94.3 12.9 166 41-278 3-203 (212)
136 PRK04940 hypothetical protein; 99.3 2.4E-10 5.2E-15 84.7 15.1 172 45-298 2-178 (180)
137 PF03583 LIP: Secretory lipase 99.3 1.9E-10 4.1E-15 94.6 15.2 228 60-306 16-287 (290)
138 PF07819 PGAP1: PGAP1-like pro 99.2 4.1E-10 8.9E-15 88.9 13.8 110 41-155 3-126 (225)
139 KOG2551 Phospholipase/carboxyh 99.2 1.3E-09 2.9E-14 82.1 15.5 183 41-303 4-223 (230)
140 COG1505 Serine proteases of th 99.2 4E-10 8.6E-15 96.8 13.6 249 11-301 388-647 (648)
141 PRK10252 entF enterobactin syn 99.2 1.2E-09 2.6E-14 109.7 19.3 101 42-152 1068-1171(1296)
142 PRK10439 enterobactin/ferric e 99.2 9.3E-09 2E-13 88.7 21.9 126 26-152 190-323 (411)
143 PF05677 DUF818: Chlamydia CHL 99.2 1.2E-08 2.5E-13 82.5 20.5 117 17-138 112-236 (365)
144 PF00151 Lipase: Lipase; Inte 99.2 1.2E-10 2.7E-15 96.9 8.2 115 39-154 68-189 (331)
145 COG3319 Thioesterase domains o 99.1 8.3E-09 1.8E-13 82.0 16.4 101 43-153 1-104 (257)
146 KOG3101 Esterase D [General fu 99.1 3.6E-09 7.8E-14 78.7 12.7 211 24-279 22-264 (283)
147 KOG4840 Predicted hydrolases o 99.1 3.4E-09 7.4E-14 79.5 12.5 104 42-155 36-147 (299)
148 PF00756 Esterase: Putative es 99.1 3.7E-09 8E-14 86.2 13.9 125 27-154 5-152 (251)
149 KOG3847 Phospholipase A2 (plat 99.1 6.2E-09 1.4E-13 82.3 13.2 114 38-153 114-276 (399)
150 KOG2237 Predicted serine prote 99.1 2.7E-09 5.8E-14 92.3 12.1 142 14-155 438-587 (712)
151 PF01674 Lipase_2: Lipase (cla 99.0 8.7E-10 1.9E-14 85.6 7.8 89 44-137 3-95 (219)
152 KOG1553 Predicted alpha/beta h 99.0 1.6E-09 3.4E-14 86.7 9.0 129 18-154 215-347 (517)
153 PF12048 DUF3530: Protein of u 99.0 3.4E-07 7.4E-12 76.0 21.3 199 29-300 72-309 (310)
154 KOG3253 Predicted alpha/beta h 99.0 2.6E-08 5.7E-13 85.7 14.4 187 41-300 175-374 (784)
155 COG1770 PtrB Protease II [Amin 99.0 2.3E-08 5.1E-13 87.3 13.9 146 11-156 413-566 (682)
156 PF00450 Peptidase_S10: Serine 98.9 1.7E-07 3.8E-12 82.4 19.6 138 15-154 9-183 (415)
157 PLN02733 phosphatidylcholine-s 98.9 5.7E-09 1.2E-13 90.0 9.2 92 57-154 108-203 (440)
158 PF05990 DUF900: Alpha/beta hy 98.9 1.6E-08 3.4E-13 80.5 10.9 113 39-153 15-138 (233)
159 COG4814 Uncharacterized protei 98.8 5.1E-07 1.1E-11 69.6 15.7 107 44-153 47-177 (288)
160 COG3150 Predicted esterase [Ge 98.8 1E-07 2.2E-12 68.4 11.1 93 45-155 2-94 (191)
161 smart00824 PKS_TE Thioesterase 98.7 2.3E-07 4.9E-12 73.5 12.4 96 47-152 2-102 (212)
162 PF11144 DUF2920: Protein of u 98.7 1.3E-06 2.9E-11 73.1 16.7 128 26-153 18-220 (403)
163 PF11339 DUF3141: Protein of u 98.7 1.6E-06 3.5E-11 74.1 16.7 88 61-156 92-179 (581)
164 cd00312 Esterase_lipase Estera 98.7 7.1E-08 1.5E-12 86.7 9.1 122 29-153 78-214 (493)
165 COG1073 Hydrolases of the alph 98.7 1.1E-06 2.3E-11 73.6 14.7 251 28-301 31-298 (299)
166 PF05577 Peptidase_S28: Serine 98.6 1.6E-06 3.4E-11 76.6 13.5 114 41-154 28-150 (434)
167 COG0627 Predicted esterase [Ge 98.5 3E-06 6.4E-11 70.0 13.2 232 39-303 51-314 (316)
168 COG2272 PnbA Carboxylesterase 98.5 6.7E-07 1.5E-11 76.2 9.5 123 29-153 79-218 (491)
169 PF05705 DUF829: Eukaryotic pr 98.5 3E-06 6.4E-11 68.5 12.7 226 45-297 2-240 (240)
170 COG4782 Uncharacterized protei 98.5 1.2E-06 2.7E-11 71.5 10.1 112 40-153 114-235 (377)
171 PF05057 DUF676: Putative seri 98.5 5.6E-07 1.2E-11 71.0 7.6 94 40-136 2-97 (217)
172 PLN02209 serine carboxypeptida 98.5 4.3E-05 9.4E-10 66.6 19.3 138 15-154 37-214 (437)
173 PF00135 COesterase: Carboxyle 98.5 3.1E-06 6.7E-11 77.3 13.0 123 29-153 108-246 (535)
174 PLN02606 palmitoyl-protein thi 98.5 1.1E-05 2.4E-10 65.1 14.3 102 43-153 27-133 (306)
175 KOG1551 Uncharacterized conser 98.4 8.7E-06 1.9E-10 63.3 12.9 251 29-301 101-367 (371)
176 PLN03016 sinapoylglucose-malat 98.4 0.00013 2.9E-09 63.6 21.7 139 15-154 35-212 (433)
177 COG2382 Fes Enterochelin ester 98.4 8.9E-06 1.9E-10 65.1 13.1 114 39-153 95-213 (299)
178 COG1075 LipA Predicted acetylt 98.4 7.7E-07 1.7E-11 75.0 7.6 102 42-153 59-165 (336)
179 PF04301 DUF452: Protein of un 98.4 4.8E-05 1E-09 58.7 15.4 80 42-153 11-91 (213)
180 PLN02633 palmitoyl protein thi 98.4 9.3E-05 2E-09 60.0 17.4 103 43-153 26-132 (314)
181 PF10142 PhoPQ_related: PhoPQ- 98.3 2.4E-05 5.3E-10 65.8 14.0 159 112-305 167-325 (367)
182 PF10340 DUF2424: Protein of u 98.3 1.4E-05 3.1E-10 66.8 12.2 108 40-155 120-238 (374)
183 KOG1282 Serine carboxypeptidas 98.3 0.00053 1.2E-08 59.5 21.2 140 14-155 41-216 (454)
184 PF02089 Palm_thioest: Palmito 98.3 9.7E-06 2.1E-10 64.9 9.6 107 42-152 5-116 (279)
185 COG3946 VirJ Type IV secretory 98.1 0.00022 4.7E-09 59.4 14.1 91 41-140 259-349 (456)
186 KOG3967 Uncharacterized conser 98.1 0.00012 2.5E-09 55.3 11.4 133 39-176 98-251 (297)
187 KOG2183 Prolylcarboxypeptidase 98.1 5.3E-05 1.1E-09 63.1 10.5 106 43-151 81-201 (492)
188 KOG3724 Negative regulator of 98.1 0.00012 2.6E-09 66.0 13.2 106 42-152 89-220 (973)
189 PF02450 LCAT: Lecithin:choles 98.0 9E-05 1.9E-09 64.1 11.9 84 58-153 66-161 (389)
190 PF07082 DUF1350: Protein of u 98.0 0.00013 2.8E-09 57.2 11.0 104 40-149 15-122 (250)
191 PF08386 Abhydrolase_4: TAP-li 98.0 2.9E-05 6.3E-10 53.1 6.6 60 234-299 34-93 (103)
192 PF05576 Peptidase_S37: PS-10 97.9 0.00025 5.4E-09 59.5 12.0 110 38-153 59-170 (448)
193 PLN02213 sinapoylglucose-malat 97.9 0.00087 1.9E-08 56.4 15.3 84 71-154 2-98 (319)
194 COG4553 DepA Poly-beta-hydroxy 97.9 0.00065 1.4E-08 54.0 13.3 108 39-155 100-212 (415)
195 KOG2541 Palmitoyl protein thio 97.9 0.00023 5.1E-09 55.9 10.4 102 43-152 24-128 (296)
196 KOG2182 Hydrolytic enzymes of 97.7 0.00048 1E-08 59.1 10.3 115 39-153 83-208 (514)
197 PF04083 Abhydro_lipase: Parti 97.7 0.00015 3.2E-09 44.1 5.3 46 13-58 8-59 (63)
198 COG2819 Predicted hydrolase of 97.7 0.0024 5.2E-08 50.8 13.1 41 113-153 133-173 (264)
199 PF11187 DUF2974: Protein of u 97.6 0.0016 3.4E-08 51.5 11.0 37 116-152 83-123 (224)
200 PF06259 Abhydrolase_8: Alpha/ 97.5 0.0071 1.5E-07 45.6 13.2 113 39-152 16-144 (177)
201 cd00741 Lipase Lipase. Lipase 97.4 0.00039 8.5E-09 51.8 6.1 57 94-152 7-67 (153)
202 PLN02517 phosphatidylcholine-s 97.3 0.00073 1.6E-08 59.8 6.4 90 59-152 158-263 (642)
203 cd00519 Lipase_3 Lipase (class 97.1 0.0059 1.3E-07 48.9 9.5 58 93-152 106-168 (229)
204 COG2939 Carboxypeptidase C (ca 97.0 0.066 1.4E-06 46.8 15.8 115 40-156 99-240 (498)
205 PF01083 Cutinase: Cutinase; 97.0 0.0033 7.1E-08 48.0 7.3 105 44-153 7-123 (179)
206 KOG1516 Carboxylesterase and r 97.0 0.0064 1.4E-07 55.8 9.8 119 29-152 96-232 (545)
207 KOG2521 Uncharacterized conser 96.9 0.048 1E-06 45.8 13.6 244 41-305 37-295 (350)
208 PF01764 Lipase_3: Lipase (cla 96.9 0.0022 4.8E-08 46.9 5.1 39 97-137 46-84 (140)
209 PF06441 EHN: Epoxide hydrolas 96.7 0.0061 1.3E-07 42.1 5.7 39 20-58 70-108 (112)
210 KOG2369 Lecithin:cholesterol a 96.5 0.0055 1.2E-07 52.6 5.4 86 58-151 125-224 (473)
211 KOG4388 Hormone-sensitive lipa 96.4 0.042 9.1E-07 48.6 10.1 103 40-153 394-509 (880)
212 PF07519 Tannase: Tannase and 96.3 0.082 1.8E-06 47.2 11.9 128 24-154 9-152 (474)
213 PF06850 PHB_depo_C: PHB de-po 96.3 0.0088 1.9E-07 45.1 4.7 66 234-300 134-202 (202)
214 COG2830 Uncharacterized protei 96.2 0.065 1.4E-06 38.9 8.7 80 41-152 10-90 (214)
215 PLN02162 triacylglycerol lipas 96.1 0.016 3.4E-07 50.2 6.3 22 115-136 276-297 (475)
216 PF11288 DUF3089: Protein of u 96.1 0.012 2.6E-07 45.4 4.9 75 62-138 38-116 (207)
217 TIGR03712 acc_sec_asp2 accesso 96.1 0.93 2E-05 39.8 17.9 123 21-154 269-392 (511)
218 PLN00413 triacylglycerol lipas 96.0 0.02 4.3E-07 49.8 6.2 22 115-136 282-303 (479)
219 COG4287 PqaA PhoPQ-activated p 95.7 0.056 1.2E-06 45.0 7.4 64 230-301 325-388 (507)
220 PLN02454 triacylglycerol lipas 95.6 0.025 5.5E-07 48.5 5.4 40 96-137 207-248 (414)
221 KOG1283 Serine carboxypeptidas 95.4 0.13 2.9E-06 42.1 8.4 134 22-156 8-170 (414)
222 PLN02310 triacylglycerol lipas 95.3 0.061 1.3E-06 46.2 6.5 21 116-136 208-228 (405)
223 PLN02571 triacylglycerol lipas 95.3 0.039 8.5E-07 47.4 5.4 20 118-137 227-246 (413)
224 PLN02408 phospholipase A1 95.1 0.045 9.7E-07 46.3 5.2 21 117-137 200-220 (365)
225 PLN02934 triacylglycerol lipas 95.1 0.035 7.5E-07 48.7 4.5 22 115-136 319-340 (515)
226 KOG1202 Animal-type fatty acid 94.9 0.11 2.4E-06 50.3 7.5 99 39-153 2120-2220(2376)
227 PF05277 DUF726: Protein of un 94.8 0.1 2.3E-06 44.0 6.5 40 115-154 218-262 (345)
228 PLN02324 triacylglycerol lipas 94.8 0.064 1.4E-06 46.1 5.2 20 117-136 215-234 (415)
229 PLN03037 lipase class 3 family 94.5 0.062 1.4E-06 47.3 4.6 20 117-136 318-337 (525)
230 PLN02802 triacylglycerol lipas 94.4 0.08 1.7E-06 46.6 5.0 21 117-137 330-350 (509)
231 COG4947 Uncharacterized protei 94.1 0.12 2.5E-06 38.2 4.7 38 116-153 100-137 (227)
232 PLN02753 triacylglycerol lipas 93.8 0.12 2.7E-06 45.6 5.1 39 98-136 290-331 (531)
233 PLN02761 lipase class 3 family 93.8 0.13 2.8E-06 45.5 5.2 21 116-136 293-313 (527)
234 PLN02847 triacylglycerol lipas 93.7 0.12 2.6E-06 46.4 4.9 23 115-137 249-271 (633)
235 PF08237 PE-PPE: PE-PPE domain 93.7 0.32 6.9E-06 38.6 6.9 64 70-137 2-68 (225)
236 PLN02719 triacylglycerol lipas 93.6 0.11 2.3E-06 45.8 4.5 20 117-136 298-317 (518)
237 COG5153 CVT17 Putative lipase 93.3 0.21 4.6E-06 40.2 5.2 36 114-151 273-308 (425)
238 KOG4540 Putative lipase essent 93.3 0.21 4.6E-06 40.2 5.2 36 114-151 273-308 (425)
239 KOG4372 Predicted alpha/beta h 93.3 0.13 2.8E-06 43.7 4.2 88 39-135 77-168 (405)
240 KOG4569 Predicted lipase [Lipi 93.1 0.15 3.2E-06 43.4 4.4 35 96-136 156-190 (336)
241 PF03283 PAE: Pectinacetyleste 92.1 0.87 1.9E-05 39.1 7.8 52 99-150 138-193 (361)
242 PF07519 Tannase: Tannase and 91.7 0.76 1.6E-05 41.2 7.3 71 234-306 353-433 (474)
243 PF09949 DUF2183: Uncharacteri 90.1 2.2 4.7E-05 28.9 6.6 83 59-147 13-97 (100)
244 COG3673 Uncharacterized conser 89.7 6.1 0.00013 32.9 9.9 99 38-137 27-142 (423)
245 KOG2029 Uncharacterized conser 89.4 1.5 3.2E-05 39.5 6.8 51 101-151 510-571 (697)
246 PF09994 DUF2235: Uncharacteri 89.3 3.3 7.2E-05 34.2 8.6 94 43-137 2-112 (277)
247 KOG4389 Acetylcholinesterase/B 87.9 3.7 8E-05 36.3 8.0 121 29-154 120-257 (601)
248 PF06309 Torsin: Torsin; Inte 85.9 6.6 0.00014 27.8 7.1 62 39-110 49-118 (127)
249 KOG2385 Uncharacterized conser 83.3 3.5 7.6E-05 36.6 5.8 41 115-155 445-490 (633)
250 COG4822 CbiK Cobalamin biosynt 81.3 11 0.00023 29.4 7.0 44 38-81 134-178 (265)
251 PRK12467 peptide synthase; Pro 79.0 19 0.00042 42.1 11.2 98 42-149 3692-3792(3956)
252 cd01714 ETF_beta The electron 74.4 17 0.00037 28.4 6.8 72 62-148 68-145 (202)
253 cd03818 GT1_ExpC_like This fam 71.5 33 0.00071 30.1 8.8 38 45-85 2-39 (396)
254 PRK05282 (alpha)-aspartyl dipe 70.3 19 0.0004 28.9 6.2 39 41-79 30-70 (233)
255 cd03146 GAT1_Peptidase_E Type 70.1 21 0.00046 28.2 6.5 41 40-80 29-70 (212)
256 PRK02399 hypothetical protein; 69.3 79 0.0017 27.8 10.0 100 46-147 6-127 (406)
257 COG0529 CysC Adenylylsulfate k 67.5 54 0.0012 25.1 8.5 39 40-78 20-59 (197)
258 PF06792 UPF0261: Uncharacteri 67.2 76 0.0017 27.9 9.5 101 44-147 3-125 (403)
259 TIGR02069 cyanophycinase cyano 66.9 31 0.00067 28.1 7.0 41 39-79 25-66 (250)
260 PF12242 Eno-Rase_NADH_b: NAD( 66.0 22 0.00047 22.6 4.5 43 96-138 18-61 (78)
261 cd07198 Patatin Patatin-like p 62.1 15 0.00033 27.8 4.2 25 115-139 24-48 (172)
262 PF08484 Methyltransf_14: C-me 62.0 39 0.00085 25.3 6.2 52 95-150 51-102 (160)
263 COG3727 Vsr DNA G:T-mismatch r 62.0 23 0.00049 25.2 4.5 36 41-76 56-114 (150)
264 PF10081 Abhydrolase_9: Alpha/ 59.7 1E+02 0.0022 25.6 8.8 39 115-153 107-148 (289)
265 cd07207 Pat_ExoU_VipD_like Exo 59.5 16 0.00035 28.2 4.1 33 103-138 16-48 (194)
266 cd07212 Pat_PNPLA9 Patatin-lik 59.4 15 0.00033 31.0 4.1 19 120-138 35-53 (312)
267 cd07225 Pat_PNPLA6_PNPLA7 Pata 59.3 16 0.00034 30.9 4.1 24 115-138 41-64 (306)
268 COG1448 TyrB Aspartate/tyrosin 59.2 31 0.00068 29.7 5.7 88 41-151 170-264 (396)
269 PF10605 3HBOH: 3HB-oligomer h 58.7 7.4 0.00016 35.5 2.2 38 118-155 286-324 (690)
270 PF02240 MCR_gamma: Methyl-coe 57.3 4.1 8.8E-05 31.2 0.3 13 342-355 145-158 (247)
271 PLN02748 tRNA dimethylallyltra 56.5 77 0.0017 28.7 8.0 78 41-125 20-120 (468)
272 TIGR02884 spore_pdaA delta-lac 56.4 13 0.00028 29.7 3.1 35 43-77 187-221 (224)
273 PRK10279 hypothetical protein; 55.7 17 0.00037 30.5 3.8 24 115-138 31-54 (300)
274 cd07210 Pat_hypo_W_succinogene 55.3 23 0.00051 28.2 4.3 24 115-138 26-49 (221)
275 TIGR03709 PPK2_rel_1 polyphosp 54.6 19 0.0004 29.5 3.7 40 40-79 53-93 (264)
276 cd03145 GAT1_cyanophycinase Ty 53.3 69 0.0015 25.4 6.7 39 41-79 28-67 (217)
277 cd00539 MCR_gamma Methyl-coenz 53.2 5.5 0.00012 30.5 0.5 13 342-355 144-157 (246)
278 COG1752 RssA Predicted esteras 53.2 21 0.00046 30.1 4.0 24 115-138 37-60 (306)
279 cd07227 Pat_Fungal_NTE1 Fungal 53.1 23 0.0005 29.2 4.1 24 115-138 36-59 (269)
280 PF01583 APS_kinase: Adenylyls 52.9 25 0.00053 26.2 3.8 37 42-78 1-38 (156)
281 TIGR03259 met_CoM_red_gam meth 52.7 5.7 0.00012 30.4 0.5 13 342-355 144-157 (244)
282 COG0541 Ffh Signal recognition 51.8 74 0.0016 28.2 6.9 70 64-148 176-247 (451)
283 smart00827 PKS_AT Acyl transfe 51.0 20 0.00044 30.0 3.6 23 115-137 80-102 (298)
284 PF00698 Acyl_transf_1: Acyl t 51.0 13 0.00029 31.5 2.5 23 115-137 82-104 (318)
285 TIGR03131 malonate_mdcH malona 50.8 21 0.00045 29.9 3.6 23 115-137 74-96 (295)
286 cd07230 Pat_TGL4-5_like Triacy 50.8 15 0.00033 32.5 2.9 36 103-141 90-125 (421)
287 cd07228 Pat_NTE_like_bacteria 50.6 31 0.00068 26.1 4.3 25 115-139 26-50 (175)
288 PRK14729 miaA tRNA delta(2)-is 50.3 1.3E+02 0.0029 25.3 8.1 74 45-125 6-101 (300)
289 COG3946 VirJ Type IV secretory 50.2 73 0.0016 27.9 6.5 106 37-149 43-154 (456)
290 COG1073 Hydrolases of the alph 50.0 2.6 5.7E-05 34.9 -1.9 109 41-152 87-199 (299)
291 PF02230 Abhydrolase_2: Phosph 49.7 47 0.001 26.2 5.3 58 42-107 155-214 (216)
292 PRK14974 cell division protein 49.4 1.1E+02 0.0025 26.2 7.7 66 68-148 220-287 (336)
293 PF00326 Peptidase_S9: Prolyl 49.4 56 0.0012 25.6 5.7 43 41-83 143-187 (213)
294 TIGR03707 PPK2_P_aer polyphosp 49.2 25 0.00055 28.1 3.6 72 40-129 28-101 (230)
295 PF00448 SRP54: SRP54-type pro 48.9 59 0.0013 25.3 5.6 72 62-148 75-148 (196)
296 cd07209 Pat_hypo_Ecoli_Z1214_l 48.9 29 0.00063 27.5 4.0 25 115-139 24-48 (215)
297 KOG1252 Cystathionine beta-syn 47.7 73 0.0016 27.1 6.0 57 22-80 188-249 (362)
298 TIGR02764 spore_ybaN_pdaB poly 46.3 19 0.0004 27.8 2.5 34 44-77 153-188 (191)
299 cd07205 Pat_PNPLA6_PNPLA7_NTE1 45.6 42 0.00092 25.4 4.3 23 116-138 27-49 (175)
300 cd07208 Pat_hypo_Ecoli_yjju_li 45.4 39 0.00085 27.7 4.4 23 118-140 28-50 (266)
301 cd05312 NAD_bind_1_malic_enz N 44.5 52 0.0011 27.2 4.8 81 45-134 27-123 (279)
302 cd07232 Pat_PLPL Patain-like p 44.3 24 0.00052 31.2 3.1 37 103-142 84-120 (407)
303 PF13207 AAA_17: AAA domain; P 44.2 52 0.0011 22.8 4.4 31 45-78 1-32 (121)
304 TIGR00128 fabD malonyl CoA-acy 43.8 29 0.00063 28.9 3.4 23 116-138 82-104 (290)
305 PRK10867 signal recognition pa 43.8 2.1E+02 0.0045 25.7 8.7 68 65-147 178-247 (433)
306 cd07224 Pat_like Patatin-like 43.5 41 0.00089 27.0 4.1 22 118-139 30-51 (233)
307 TIGR00521 coaBC_dfp phosphopan 43.3 2.1E+02 0.0046 25.3 8.6 60 60-124 132-193 (390)
308 PRK00091 miaA tRNA delta(2)-is 43.1 1.4E+02 0.0031 25.2 7.3 73 43-122 4-99 (307)
309 cd07229 Pat_TGL3_like Triacylg 42.3 27 0.00057 30.6 3.0 27 115-141 109-135 (391)
310 KOG0781 Signal recognition par 41.8 59 0.0013 29.2 4.9 85 49-148 445-538 (587)
311 cd07211 Pat_PNPLA8 Patatin-lik 41.7 37 0.0008 28.7 3.7 17 120-136 44-60 (308)
312 PF11713 Peptidase_C80: Peptid 41.6 31 0.00068 25.7 2.9 53 77-129 60-116 (157)
313 TIGR02873 spore_ylxY probable 41.2 26 0.00056 28.9 2.7 34 43-77 231-264 (268)
314 TIGR00632 vsr DNA mismatch end 40.9 63 0.0014 22.7 4.1 15 62-76 99-113 (117)
315 cd07218 Pat_iPLA2 Calcium-inde 40.7 53 0.0011 26.7 4.3 20 120-139 33-52 (245)
316 KOG1209 1-Acyl dihydroxyaceton 40.6 48 0.001 26.2 3.7 36 42-79 6-41 (289)
317 TIGR01425 SRP54_euk signal rec 40.1 1.1E+02 0.0023 27.4 6.3 68 66-148 178-247 (429)
318 cd07231 Pat_SDP1-like Sugar-De 40.0 27 0.00059 29.4 2.6 25 115-139 94-118 (323)
319 PF03681 UPF0150: Uncharacteri 39.8 63 0.0014 18.1 3.4 35 68-108 11-45 (48)
320 PF03976 PPK2: Polyphosphate k 39.6 17 0.00037 29.1 1.3 40 41-80 29-69 (228)
321 PF13709 DUF4159: Domain of un 39.3 1.9E+02 0.0041 22.8 7.8 74 234-319 53-127 (207)
322 cd07206 Pat_TGL3-4-5_SDP1 Tria 39.0 39 0.00085 28.3 3.4 28 115-142 95-122 (298)
323 PF03853 YjeF_N: YjeF-related 38.5 47 0.001 25.1 3.5 35 40-75 23-57 (169)
324 COG3933 Transcriptional antite 38.1 1.9E+02 0.0042 25.8 7.3 77 40-135 107-183 (470)
325 PRK05579 bifunctional phosphop 37.7 2.2E+02 0.0048 25.2 7.9 72 44-124 118-196 (399)
326 COG3887 Predicted signaling pr 37.2 93 0.002 28.8 5.5 52 95-151 320-377 (655)
327 PLN02840 tRNA dimethylallyltra 36.9 2.1E+02 0.0045 25.6 7.5 76 42-124 20-118 (421)
328 PF05724 TPMT: Thiopurine S-me 36.8 32 0.0007 27.3 2.5 29 44-78 39-67 (218)
329 PRK13690 hypothetical protein; 36.2 87 0.0019 23.7 4.4 35 93-127 2-36 (184)
330 PF08433 KTI12: Chromatin asso 35.6 1.6E+02 0.0035 24.3 6.5 39 44-82 2-41 (270)
331 KOG2170 ATPase of the AAA+ sup 35.0 55 0.0012 27.4 3.5 32 39-70 106-138 (344)
332 TIGR03127 RuMP_HxlB 6-phospho 34.7 1.5E+02 0.0032 22.5 5.8 82 45-131 32-114 (179)
333 PF04084 ORC2: Origin recognit 34.2 2.3E+02 0.0049 24.3 7.2 31 46-77 57-89 (326)
334 PF03575 Peptidase_S51: Peptid 33.7 97 0.0021 22.9 4.5 23 59-81 2-24 (154)
335 COG0031 CysK Cysteine synthase 33.5 1.1E+02 0.0023 25.8 5.0 121 21-150 144-291 (300)
336 cd03129 GAT1_Peptidase_E_like 33.4 2.2E+02 0.0049 22.3 6.8 39 41-79 28-66 (210)
337 PF01075 Glyco_transf_9: Glyco 33.1 76 0.0016 25.5 4.2 37 41-77 104-144 (247)
338 KOG1200 Mitochondrial/plastidi 32.9 2.4E+02 0.0051 22.2 6.2 33 45-80 16-48 (256)
339 PRK06171 sorbitol-6-phosphate 32.6 1.8E+02 0.0039 23.6 6.4 33 45-80 11-43 (266)
340 PRK13256 thiopurine S-methyltr 32.2 35 0.00075 27.3 2.0 29 45-79 46-74 (226)
341 COG0552 FtsY Signal recognitio 31.9 3.3E+02 0.0072 23.4 7.8 76 64-148 215-292 (340)
342 TIGR00174 miaA tRNA isopenteny 31.9 1.9E+02 0.0042 24.2 6.3 30 92-125 68-97 (287)
343 COG3621 Patatin [General funct 31.8 1.4E+02 0.0029 25.5 5.2 55 71-139 9-64 (394)
344 cd01819 Patatin_and_cPLA2 Pata 31.7 80 0.0017 23.4 3.8 19 117-135 28-46 (155)
345 cd01523 RHOD_Lact_B Member of 31.6 91 0.002 20.7 3.8 30 40-74 60-89 (100)
346 TIGR00959 ffh signal recogniti 31.6 3.9E+02 0.0084 24.0 8.4 70 64-148 176-247 (428)
347 KOG1532 GTPase XAB1, interacts 31.5 3.1E+02 0.0068 22.9 8.7 39 40-78 16-55 (366)
348 PF12000 Glyco_trans_4_3: Gkyc 31.4 2.2E+02 0.0048 21.7 6.0 67 69-140 19-88 (171)
349 COG0426 FpaA Uncharacterized f 31.3 1.8E+02 0.0039 25.6 6.1 73 45-142 251-332 (388)
350 PF05577 Peptidase_S28: Serine 31.2 80 0.0017 28.2 4.4 41 235-280 377-417 (434)
351 PHA02114 hypothetical protein 30.8 87 0.0019 20.9 3.2 35 42-77 82-116 (127)
352 PF14606 Lipase_GDSL_3: GDSL-l 30.5 1.3E+02 0.0028 23.0 4.7 14 70-83 33-46 (178)
353 PF06180 CbiK: Cobalt chelatas 30.4 1.9E+02 0.0042 23.8 6.0 31 40-70 140-170 (262)
354 PF03205 MobB: Molybdopterin g 30.3 84 0.0018 22.8 3.6 41 45-85 2-43 (140)
355 COG0331 FabD (acyl-carrier-pro 30.2 71 0.0015 27.0 3.6 22 115-136 83-104 (310)
356 cd07220 Pat_PNPLA2 Patatin-lik 29.9 88 0.0019 25.5 4.0 22 118-139 37-58 (249)
357 cd02011 TPP_PK Thiamine pyroph 29.4 3E+02 0.0065 22.1 6.7 34 44-77 117-155 (227)
358 COG1255 Uncharacterized protei 29.1 58 0.0013 22.7 2.3 21 59-79 25-45 (129)
359 TIGR02816 pfaB_fam PfaB family 29.0 68 0.0015 29.6 3.5 25 114-138 262-286 (538)
360 COG0324 MiaA tRNA delta(2)-iso 28.9 3.6E+02 0.0079 22.9 7.4 76 43-125 3-101 (308)
361 PLN02251 pyrophosphate-depende 28.7 3.2E+02 0.0069 25.6 7.6 94 43-140 192-293 (568)
362 KOG4231 Intracellular membrane 28.4 79 0.0017 28.6 3.6 17 121-137 454-470 (763)
363 COG0859 RfaF ADP-heptose:LPS h 28.3 1.1E+02 0.0023 26.3 4.5 36 42-77 175-215 (334)
364 COG1506 DAP2 Dipeptidyl aminop 28.3 2.6E+02 0.0055 26.6 7.3 65 39-109 548-614 (620)
365 cd07217 Pat17_PNPLA8_PNPLA9_li 28.3 56 0.0012 28.2 2.7 18 120-137 44-61 (344)
366 cd07204 Pat_PNPLA_like Patatin 28.2 1.1E+02 0.0023 24.9 4.2 20 120-139 34-53 (243)
367 TIGR02026 BchE magnesium-proto 28.2 4.8E+02 0.01 24.0 9.0 25 59-83 25-50 (497)
368 KOG2214 Predicted esterase of 28.2 25 0.00055 31.4 0.7 32 115-146 200-231 (543)
369 COG1856 Uncharacterized homolo 28.1 3.2E+02 0.0069 22.0 7.7 82 61-148 101-186 (275)
370 cd07222 Pat_PNPLA4 Patatin-lik 28.0 82 0.0018 25.6 3.5 18 119-136 33-50 (246)
371 PRK10964 ADP-heptose:LPS hepto 27.9 1.2E+02 0.0026 25.7 4.7 35 41-75 177-215 (322)
372 cd07213 Pat17_PNPLA8_PNPLA9_li 27.8 57 0.0012 27.2 2.7 20 119-138 36-55 (288)
373 KOG0780 Signal recognition par 27.8 2.9E+02 0.0062 24.4 6.6 57 64-135 177-233 (483)
374 PRK08762 molybdopterin biosynt 27.8 4.2E+02 0.0091 23.2 9.4 34 115-151 134-168 (376)
375 PF01734 Patatin: Patatin-like 27.7 67 0.0015 24.3 3.0 23 115-137 25-47 (204)
376 COG0218 Predicted GTPase [Gene 27.6 64 0.0014 25.1 2.6 62 230-299 131-198 (200)
377 PF14253 AbiH: Bacteriophage a 27.6 59 0.0013 26.7 2.8 15 115-129 233-247 (270)
378 COG0796 MurI Glutamate racemas 27.5 1.7E+02 0.0037 24.1 5.1 62 235-301 6-67 (269)
379 TIGR03708 poly_P_AMP_trns poly 27.0 1E+02 0.0023 28.0 4.2 41 40-80 37-78 (493)
380 TIGR02477 PFKA_PPi diphosphate 26.8 2.8E+02 0.006 25.8 6.9 95 43-140 163-264 (539)
381 cd00401 AdoHcyase S-adenosyl-L 26.5 3.3E+02 0.0072 24.3 7.1 67 60-147 75-141 (413)
382 PRK10673 acyl-CoA esterase; Pr 26.4 3E+02 0.0066 21.9 6.8 63 234-300 16-78 (255)
383 cd07221 Pat_PNPLA3 Patatin-lik 26.2 1.2E+02 0.0027 24.7 4.2 22 118-139 33-54 (252)
384 PRK11460 putative hydrolase; P 26.1 2.8E+02 0.006 22.2 6.3 41 42-82 148-190 (232)
385 PF09314 DUF1972: Domain of un 25.9 3.1E+02 0.0068 21.2 9.5 93 44-136 5-113 (185)
386 TIGR02690 resist_ArsH arsenica 25.8 3.5E+02 0.0075 21.6 9.3 38 43-80 27-67 (219)
387 PF09419 PGP_phosphatase: Mito 25.8 1.7E+02 0.0036 22.2 4.5 53 66-127 36-88 (168)
388 PF03610 EIIA-man: PTS system 25.7 2.3E+02 0.005 19.6 6.0 74 44-135 2-76 (116)
389 cd01983 Fer4_NifH The Fer4_Nif 25.7 1.2E+02 0.0026 19.5 3.6 22 56-77 13-34 (99)
390 PTZ00445 p36-lilke protein; Pr 25.7 2.6E+02 0.0055 22.3 5.5 64 60-127 32-102 (219)
391 COG1832 Predicted CoA-binding 25.7 1.8E+02 0.0038 21.2 4.3 34 46-79 19-52 (140)
392 cd05005 SIS_PHI Hexulose-6-pho 25.6 2.7E+02 0.0059 21.1 5.9 81 46-131 36-117 (179)
393 COG0482 TrmU Predicted tRNA(5- 25.6 3E+02 0.0065 23.9 6.4 59 42-108 4-62 (356)
394 PTZ00317 NADP-dependent malic 25.5 1.3E+02 0.0027 27.9 4.4 79 45-131 299-396 (559)
395 PF06833 MdcE: Malonate decarb 25.1 1.8E+02 0.0038 23.5 4.7 60 71-136 66-128 (234)
396 KOG2805 tRNA (5-methylaminomet 24.9 3.4E+02 0.0073 23.1 6.3 61 42-108 6-66 (377)
397 cd00765 Pyrophosphate_PFK Phos 24.7 3.8E+02 0.0081 25.1 7.3 95 43-140 168-269 (550)
398 PF01118 Semialdhyde_dh: Semia 24.7 1.1E+02 0.0024 21.4 3.3 31 118-149 1-32 (121)
399 TIGR01626 ytfJ_HI0045 conserve 24.7 2.2E+02 0.0048 22.0 5.1 51 26-77 43-101 (184)
400 cd01521 RHOD_PspE2 Member of t 24.6 2E+02 0.0044 19.5 4.6 35 40-77 63-97 (110)
401 KOG0855 Alkyl hydroperoxide re 24.6 2.8E+02 0.0061 21.0 5.2 57 17-77 69-131 (211)
402 PF03358 FMN_red: NADPH-depend 24.6 50 0.0011 24.1 1.7 37 45-81 3-42 (152)
403 COG5441 Uncharacterized conser 24.2 4.4E+02 0.0095 22.3 8.5 100 45-146 4-122 (401)
404 TIGR00064 ftsY signal recognit 24.2 4.2E+02 0.009 22.0 8.3 73 67-148 151-225 (272)
405 KOG3349 Predicted glycosyltran 24.1 2E+02 0.0043 21.4 4.4 52 24-75 59-132 (170)
406 PLN02735 carbamoyl-phosphate s 24.1 3.6E+02 0.0079 27.9 7.7 67 61-136 599-667 (1102)
407 PF00070 Pyr_redox: Pyridine n 23.9 1.3E+02 0.0029 18.9 3.4 32 118-152 1-32 (80)
408 PF06500 DUF1100: Alpha/beta h 23.7 1.4E+02 0.003 26.5 4.3 65 234-300 189-255 (411)
409 COG2240 PdxK Pyridoxal/pyridox 23.6 4.4E+02 0.0095 22.0 10.1 98 48-157 11-118 (281)
410 COG4088 Predicted nucleotide k 23.3 87 0.0019 24.8 2.6 35 44-78 2-37 (261)
411 PF08497 Radical_SAM_N: Radica 23.3 3.9E+02 0.0085 22.4 6.3 37 44-80 18-56 (302)
412 cd03557 L-arabinose_isomerase 23.2 5.9E+02 0.013 23.4 8.5 60 93-153 17-78 (484)
413 PRK01254 hypothetical protein; 23.1 3.4E+02 0.0073 26.1 6.7 38 43-80 40-79 (707)
414 PRK13529 malate dehydrogenase; 23.1 1.7E+02 0.0037 27.2 4.8 39 45-83 297-342 (563)
415 TIGR02193 heptsyl_trn_I lipopo 23.1 1.6E+02 0.0035 24.8 4.7 36 41-76 178-217 (319)
416 COG0505 CarA Carbamoylphosphat 23.1 3.9E+02 0.0085 23.2 6.5 65 60-135 191-267 (368)
417 PLN03028 pyrophosphate--fructo 23.0 3.9E+02 0.0084 25.4 7.1 93 43-140 175-276 (610)
418 cd05014 SIS_Kpsf KpsF-like pro 22.9 1.9E+02 0.0041 20.2 4.4 31 46-77 3-33 (128)
419 COG4057 McrG Methyl coenzyme M 22.9 34 0.00074 26.1 0.4 12 343-355 150-162 (257)
420 PF05673 DUF815: Protein of un 22.9 4.3E+02 0.0092 21.6 6.6 14 71-84 53-66 (249)
421 COG0607 PspE Rhodanese-related 22.8 1.7E+02 0.0037 19.6 4.0 34 40-79 60-93 (110)
422 PRK13255 thiopurine S-methyltr 22.6 1.3E+02 0.0027 24.0 3.6 15 64-78 53-67 (218)
423 KOG3551 Syntrophins (type beta 22.2 85 0.0018 27.1 2.6 40 15-54 449-497 (506)
424 COG3640 CooC CO dehydrogenase 22.1 1.4E+02 0.0031 24.1 3.7 34 45-78 2-37 (255)
425 PF13380 CoA_binding_2: CoA bi 22.1 2.4E+02 0.0051 19.7 4.5 33 48-80 5-37 (116)
426 cd01518 RHOD_YceA Member of th 21.7 1.5E+02 0.0032 19.7 3.4 33 40-77 60-93 (101)
427 PRK13230 nitrogenase reductase 21.5 1.3E+02 0.0028 24.9 3.7 41 44-85 3-44 (279)
428 PF03033 Glyco_transf_28: Glyc 21.4 77 0.0017 22.6 2.1 34 45-79 2-35 (139)
429 cd07216 Pat17_PNPLA8_PNPLA9_li 21.3 66 0.0014 27.2 1.9 17 120-136 45-61 (309)
430 cd03413 CbiK_C Anaerobic cobal 21.3 2.8E+02 0.006 18.9 6.0 28 43-70 2-29 (103)
431 PF04244 DPRP: Deoxyribodipyri 21.3 3.3E+02 0.0072 21.8 5.6 21 59-79 51-71 (224)
432 PRK07933 thymidylate kinase; V 21.3 1.8E+02 0.004 22.9 4.3 40 45-84 2-42 (213)
433 PRK06523 short chain dehydroge 21.2 3.5E+02 0.0076 21.8 6.2 32 45-79 11-42 (260)
434 cd01971 Nitrogenase_VnfN_like 21.1 4.6E+02 0.01 23.5 7.2 59 59-125 105-164 (427)
435 COG0400 Predicted esterase [Ge 21.1 3.9E+02 0.0086 21.1 6.0 42 40-81 144-188 (207)
436 PF00004 AAA: ATPase family as 21.0 2.9E+02 0.0064 19.1 6.1 52 46-108 1-53 (132)
437 PLN03050 pyridoxine (pyridoxam 21.0 1.7E+02 0.0036 23.9 4.0 33 44-77 62-94 (246)
438 PF00691 OmpA: OmpA family; I 21.0 1.3E+02 0.0028 19.8 3.0 62 60-125 18-79 (97)
439 COG1763 MobB Molybdopterin-gua 20.9 1.9E+02 0.0041 21.7 4.0 39 44-82 3-42 (161)
440 PRK03094 hypothetical protein; 20.9 1.2E+02 0.0026 19.6 2.5 19 60-78 11-29 (80)
441 PRK00889 adenylylsulfate kinas 20.8 2E+02 0.0043 21.6 4.3 36 43-78 4-40 (175)
442 PF11080 DUF2622: Protein of u 20.8 2.8E+02 0.006 18.7 6.6 64 45-109 10-73 (96)
443 PF01656 CbiA: CobQ/CobB/MinD/ 20.8 1.4E+02 0.003 22.8 3.5 34 46-79 2-36 (195)
444 KOG2112 Lysophospholipase [Lip 20.5 3.2E+02 0.007 21.5 5.2 58 42-107 144-203 (206)
445 cd01520 RHOD_YbbB Member of th 20.5 2.1E+02 0.0045 20.2 4.1 33 40-77 85-118 (128)
446 cd07199 Pat17_PNPLA8_PNPLA9_li 20.4 78 0.0017 25.9 2.1 18 120-137 37-54 (258)
447 cd03131 GATase1_HTS Type 1 glu 20.4 40 0.00086 25.7 0.4 35 96-136 82-116 (175)
448 COG4221 Short-chain alcohol de 20.4 1.6E+02 0.0035 23.9 3.7 32 45-79 8-39 (246)
449 PF00148 Oxidored_nitro: Nitro 20.3 4.2E+02 0.009 23.4 6.8 60 60-127 94-156 (398)
450 PF03698 UPF0180: Uncharacteri 20.2 1.2E+02 0.0025 19.7 2.4 19 60-78 11-29 (80)
451 PRK11168 glpC sn-glycerol-3-ph 20.2 5.2E+02 0.011 22.8 7.3 43 42-84 161-205 (396)
452 cd07214 Pat17_isozyme_like Pat 20.2 74 0.0016 27.5 2.0 19 120-138 46-64 (349)
453 TIGR03840 TMPT_Se_Te thiopurin 20.0 1.4E+02 0.0031 23.6 3.4 15 64-78 50-64 (213)
No 1
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=100.00 E-value=2e-44 Score=279.19 Aligned_cols=289 Identities=58% Similarity=1.059 Sum_probs=271.8
Q ss_pred CCccceeeeeEEecCCcEEEEEEEcCC--CCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCc
Q 018375 12 KTVVEYQEEYIRNARGVQLFTCRWLPF--STPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARC 89 (357)
Q Consensus 12 ~~~~~~~~~~~~~~~g~~l~~~~~~p~--~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~ 89 (357)
..++...+.++.+.+|.+|.++.|.|. .+++..|+++||++......+..++..|+..||.|+++|++|||.|++...
T Consensus 22 ~~~~~~~~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~ 101 (313)
T KOG1455|consen 22 DGGVTYSESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHA 101 (313)
T ss_pred CCccceeeeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcc
Confidence 345667888999999999999999993 367889999999999876666899999999999999999999999999988
Q ss_pred cccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHH
Q 018375 90 YIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILT 169 (357)
Q Consensus 90 ~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~ 169 (357)
+..+++..++|+...++.++.+......+..++||||||.+++.++.+.|+..+++|+++|.+...+...+.+....++.
T Consensus 102 yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~ 181 (313)
T KOG1455|consen 102 YVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISILT 181 (313)
T ss_pred cCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHHHH
Confidence 88899999999999999998888878899999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCcccCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCCccCC
Q 018375 170 RVEEIIPKWKIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTD 249 (357)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~ 249 (357)
.+..++|.|...+.+......+.++..+.....++..+...+++....+.++...++...+.++++|.+++||+.|.++.
T Consensus 182 ~l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD~VTD 261 (313)
T KOG1455|consen 182 LLSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDDKVTD 261 (313)
T ss_pred HHHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCCcccC
Confidence 99999999998888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHHh
Q 018375 250 PEVSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDER 300 (357)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~ 300 (357)
+..++.+++...+.++++..|||.-|.++..+++++.+.|...|.+||+++
T Consensus 262 p~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 262 PKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred cHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 999999999999899999999999999998788889999999999999875
No 2
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=2e-41 Score=288.15 Aligned_cols=292 Identities=47% Similarity=0.854 Sum_probs=215.4
Q ss_pred CCCccceeeeeEEecCCcEEEEEEEcCC-CCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCc
Q 018375 11 NKTVVEYQEEYIRNARGVQLFTCRWLPF-STPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARC 89 (357)
Q Consensus 11 ~~~~~~~~~~~~~~~~g~~l~~~~~~p~-~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~ 89 (357)
++.++.+++.++.+.+|.+|+|+.|.|. +.++++|||+||++++...|+..++..|+++||+|+++|+||||.|++...
T Consensus 55 ~~~~~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~ 134 (349)
T PLN02385 55 PPSGIKTEESYEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHG 134 (349)
T ss_pred CccCcceeeeeEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCC
Confidence 3445667788888999999999999984 356789999999998866666889999998899999999999999987655
Q ss_pred cccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHH
Q 018375 90 YIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILT 169 (357)
Q Consensus 90 ~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~ 169 (357)
...+++++++|+.++++.+.........+++|+||||||.+++.++.++|++++++|+++|.........+......+..
T Consensus 135 ~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~ 214 (349)
T PLN02385 135 YIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQILI 214 (349)
T ss_pred CcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHHHHH
Confidence 54588999999999999885433334458999999999999999999999999999999997765433323333333333
Q ss_pred HHHhhcccCcccCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCCccCC
Q 018375 170 RVEEIIPKWKIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTD 249 (357)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~ 249 (357)
.+....+.+.......+....+...............+.....+......+....+....+.++++|+|+|+|++|.+++
T Consensus 215 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~ 294 (349)
T PLN02385 215 LLANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTD 294 (349)
T ss_pred HHHHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccC
Confidence 33333333322222222222222222111111111222222334444445544445666788999999999999999999
Q ss_pred hHHHHHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHHhcc
Q 018375 250 PEVSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDERMS 302 (357)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~~ 302 (357)
++.++.+++.+..+++++++++++||.++.++|++..+++++.|.+||++++.
T Consensus 295 ~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 295 PSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred hHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhcc
Confidence 99999999988656799999999999999999998888899999999998864
No 3
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=1.1e-39 Score=275.95 Aligned_cols=292 Identities=48% Similarity=0.832 Sum_probs=208.6
Q ss_pred ccceeeeeEEecCCcEEEEEEEcCCC--CCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccc
Q 018375 14 VVEYQEEYIRNARGVQLFTCRWLPFS--TPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYI 91 (357)
Q Consensus 14 ~~~~~~~~~~~~~g~~l~~~~~~p~~--~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~ 91 (357)
++..++.++.+.||.+|+|+.|.|.+ +++++|||+||++.+....+..++..|+++||+|+++|+||||.|.+.....
T Consensus 29 ~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~ 108 (330)
T PLN02298 29 GIKGSKSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYV 108 (330)
T ss_pred CCccccceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccC
Confidence 46677778888999999999998743 4678899999998765433467788899999999999999999998655544
Q ss_pred cchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHHHH
Q 018375 92 KKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTRV 171 (357)
Q Consensus 92 ~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 171 (357)
.+++.+++|+.++++.+.........+++|+||||||.+++.++.++|++|+++|+++|...........+........+
T Consensus 109 ~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 188 (330)
T PLN02298 109 PNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPIPQILTFV 188 (330)
T ss_pred CCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchHHHHHHHHH
Confidence 57889999999999999654333445799999999999999999999999999999999765544322222222222333
Q ss_pred HhhcccCcccCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCCccCChH
Q 018375 172 EEIIPKWKIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDPE 251 (357)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~ 251 (357)
....+...........................+..+......................+.++++|+|+++|++|.++|++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~ivp~~ 268 (330)
T PLN02298 189 ARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLHGSADVVTDPD 268 (330)
T ss_pred HHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEecCCCCCCCHH
Confidence 33333322111111111111111111111222222322233333333333333445678889999999999999999999
Q ss_pred HHHHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHHhccccc
Q 018375 252 VSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDERMSDAN 305 (357)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~~~~~ 305 (357)
.++.+++.+..++++++++++++|.+++++|+...+.+.+.|.+||.+++....
T Consensus 269 ~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~~~ 322 (330)
T PLN02298 269 VSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCTGKA 322 (330)
T ss_pred HHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhccCCC
Confidence 999999888656799999999999999999988778899999999999986654
No 4
>PHA02857 monoglyceride lipase; Provisional
Probab=100.00 E-value=9.7e-36 Score=246.18 Aligned_cols=269 Identities=24% Similarity=0.449 Sum_probs=187.0
Q ss_pred eEEecCCcEEEEEEEcCCCCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHH
Q 018375 21 YIRNARGVQLFTCRWLPFSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVND 100 (357)
Q Consensus 21 ~~~~~~g~~l~~~~~~p~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d 100 (357)
++.+.||.+|.|+.|.|...++++|+++||+++++..| ..+++.|++.||.|+++|+||||.|++......++.++++|
T Consensus 4 ~~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~~-~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d 82 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPITYPKALVFISHGAGEHSGRY-EELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRD 82 (276)
T ss_pred eeecCCCCEEEEEeccCCCCCCEEEEEeCCCccccchH-HHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHH
Confidence 46678999999999999666778888889999887766 89999999999999999999999998654333467778888
Q ss_pred HHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHHHHHh-hcccCc
Q 018375 101 CDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTRVEE-IIPKWK 179 (357)
Q Consensus 101 ~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 179 (357)
+..+++.+... ....+++|+||||||.+|+.+|.++|+.++++|+++|...... . .....+...... ..+...
T Consensus 83 ~~~~l~~~~~~--~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~-~---~~~~~~~~~~~~~~~~~~~ 156 (276)
T PHA02857 83 VVQHVVTIKST--YPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEA-V---PRLNLLAAKLMGIFYPNKI 156 (276)
T ss_pred HHHHHHHHHhh--CCCCCEEEEEcCchHHHHHHHHHhCccccceEEEecccccccc-c---cHHHHHHHHHHHHhCCCCc
Confidence 88888877432 2456899999999999999999999999999999999754221 1 111111111111 111111
Q ss_pred ccCccccchhhc-cChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCCccCChHHHHHHHH
Q 018375 180 IVPTKDVIDSAF-KDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYE 258 (357)
Q Consensus 180 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~ 258 (357)
.. ......+ ............+....................+....+.++++|+|+++|++|.++|++.++.+.+
T Consensus 157 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~ 233 (276)
T PHA02857 157 VG---KLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQ 233 (276)
T ss_pred cC---CCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHH
Confidence 10 0011111 1111111111122111111122222222222334456788999999999999999999999999998
Q ss_pred HccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHHhc
Q 018375 259 RASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDERM 301 (357)
Q Consensus 259 ~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~ 301 (357)
.+.. ++++.+++++||.++.|.++ ..+++++.|.+||.++.
T Consensus 234 ~~~~-~~~~~~~~~~gH~~~~e~~~-~~~~~~~~~~~~l~~~~ 274 (276)
T PHA02857 234 HANC-NREIKIYEGAKHHLHKETDE-VKKSVMKEIETWIFNRV 274 (276)
T ss_pred HccC-CceEEEeCCCcccccCCchh-HHHHHHHHHHHHHHHhc
Confidence 8853 78999999999999988774 47789999999998863
No 5
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=100.00 E-value=3.3e-34 Score=234.83 Aligned_cols=286 Identities=28% Similarity=0.442 Sum_probs=219.8
Q ss_pred ccceeeeeEEecCCcEEEEEEEcCCCCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCC-CCCcccc
Q 018375 14 VVEYQEEYIRNARGVQLFTCRWLPFSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSR-GARCYIK 92 (357)
Q Consensus 14 ~~~~~~~~~~~~~g~~l~~~~~~p~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~-~~~~~~~ 92 (357)
.....+..+...||..+.|+.|.+...+..+||++||.+.+...| ..++..|..+||.|+++|+||||.|. +..+...
T Consensus 6 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry-~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~ 84 (298)
T COG2267 6 PRTRTEGYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRY-EELADDLAARGFDVYALDLRGHGRSPRGQRGHVD 84 (298)
T ss_pred ccccccceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHHHH-HHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCch
Confidence 345667788899999999999988666668999999999998887 78999999999999999999999998 6666666
Q ss_pred chhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHHHHH
Q 018375 93 KFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTRVE 172 (357)
Q Consensus 93 ~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (357)
+++++..|+..+++.+... ....+++++||||||.+++.++.+++..|+++||.+|....................+.
T Consensus 85 ~f~~~~~dl~~~~~~~~~~--~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~ 162 (298)
T COG2267 85 SFADYVDDLDAFVETIAEP--DPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLALKLLG 162 (298)
T ss_pred hHHHHHHHHHHHHHHHhcc--CCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHhccccc
Confidence 7999999999999998542 35789999999999999999999999999999999999876641111112222222233
Q ss_pred hhcccCcccC---ccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhh-hHhhccCCccccEEEEeeCCCccC
Q 018375 173 EIIPKWKIVP---TKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSM-SLEDSLSKVMIPFFVLHGEADTVT 248 (357)
Q Consensus 173 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~Pvl~i~g~~D~~~ 248 (357)
...+.+.... ..........++........++..........+......... ........+++|+|+++|++|.++
T Consensus 163 ~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv 242 (298)
T COG2267 163 RIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVV 242 (298)
T ss_pred ccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCccc
Confidence 3333333322 122234444566677777777776666666666655555444 344456778999999999999999
Q ss_pred C-hHHHHHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHHhccc
Q 018375 249 D-PEVSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDERMSD 303 (357)
Q Consensus 249 ~-~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~~~ 303 (357)
+ .+...++++.+..+++++++++|+.|..+.|... ..+++.+.+.+|+.++.+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~-~r~~~~~~~~~~l~~~~~~ 297 (298)
T COG2267 243 DNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDR-AREEVLKDILAWLAEALPS 297 (298)
T ss_pred cCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcch-HHHHHHHHHHHHHHhhccC
Confidence 9 7888888998888889999999999999965443 3478999999999887653
No 6
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=1.2e-33 Score=240.48 Aligned_cols=278 Identities=30% Similarity=0.546 Sum_probs=192.2
Q ss_pred cceeeeeEEecCCcEEEEEEEcC-CCCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccc
Q 018375 15 VEYQEEYIRNARGVQLFTCRWLP-FSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKK 93 (357)
Q Consensus 15 ~~~~~~~~~~~~g~~l~~~~~~p-~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~ 93 (357)
.......+...++..+++..|.| .+.++++|||+||++++...| ..++..|+++||.|+++|+||||.|++...+..+
T Consensus 108 ~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~-~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~ 186 (395)
T PLN02652 108 TRWATSLFYGARRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRY-LHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPS 186 (395)
T ss_pred ceEEEEEEECCCCCEEEEEEecCCCCCCceEEEEECCchHHHHHH-HHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcC
Confidence 34566677888899999999998 456678999999999886666 7899999999999999999999999877655567
Q ss_pred hhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCC---CcccEEEEeccccccccccCChhHHHHHHHH
Q 018375 94 FENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDP---SFWNGAVLVAPMCKISEKVKPHPVLVNILTR 170 (357)
Q Consensus 94 ~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p---~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~ 170 (357)
++.+++|+..+++.+... .+..+++++||||||.+++.++. +| ++++++|+.+|....... ......+...
T Consensus 187 ~~~~~~Dl~~~l~~l~~~--~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~---~~~~~~~~~l 260 (395)
T PLN02652 187 LDYVVEDTEAFLEKIRSE--NPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPA---HPIVGAVAPI 260 (395)
T ss_pred HHHHHHHHHHHHHHHHHh--CCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccc---hHHHHHHHHH
Confidence 888999999999999543 23458999999999999998764 55 379999999998654321 1111111112
Q ss_pred HHhhcccCcccCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCCccCCh
Q 018375 171 VEEIIPKWKIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDP 250 (357)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~ 250 (357)
.....+.+..............++........++..+......................+.++++|+|+++|++|.++|+
T Consensus 261 ~~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~ 340 (395)
T PLN02652 261 FSLVAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTDP 340 (395)
T ss_pred HHHhCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCCCH
Confidence 22222222111110000011111111111112222222222222222333333345567889999999999999999999
Q ss_pred HHHHHHHHHccCCCceEEEcCCCCcccccC-CCChhhhhHHHHHHHHHHHhccc
Q 018375 251 EVSKALYERASSRDKTIKLYPGMWHALTSG-EPDENIDIVFGDIIAWLDERMSD 303 (357)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~-~p~~~~~~~~~~i~~fl~~~~~~ 303 (357)
+.++.+++.+...+++++++++++|.++++ .+++ +++.|.+||..++..
T Consensus 341 ~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~----v~~~I~~FL~~~~~~ 390 (395)
T PLN02652 341 LASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREE----VGRDIIDWMEKRLDL 390 (395)
T ss_pred HHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHH----HHHHHHHHHHHHhhc
Confidence 999999998765578999999999999875 3444 999999999988753
No 7
>PRK10749 lysophospholipase L2; Provisional
Probab=100.00 E-value=1.8e-33 Score=237.22 Aligned_cols=278 Identities=19% Similarity=0.285 Sum_probs=186.8
Q ss_pred eeeeeEEecCCcEEEEEEEcCCCCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCc-----cc
Q 018375 17 YQEEYIRNARGVQLFTCRWLPFSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARC-----YI 91 (357)
Q Consensus 17 ~~~~~~~~~~g~~l~~~~~~p~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~-----~~ 91 (357)
.++..+...+|.+|+|..|.|. .++++||++||++.+...| ..++..|++.||+|+++|+||||.|+.... ..
T Consensus 30 ~~~~~~~~~~g~~l~~~~~~~~-~~~~~vll~HG~~~~~~~y-~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~ 107 (330)
T PRK10749 30 REEAEFTGVDDIPIRFVRFRAP-HHDRVVVICPGRIESYVKY-AELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHV 107 (330)
T ss_pred ccceEEEcCCCCEEEEEEccCC-CCCcEEEEECCccchHHHH-HHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCcc
Confidence 4556677889999999999764 4567899999998876666 788888989999999999999999975421 23
Q ss_pred cchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHHHH
Q 018375 92 KKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTRV 171 (357)
Q Consensus 92 ~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 171 (357)
.+++++++|+..+++.+... .+..+++++||||||.+++.++.++|+.++++|+++|........ +......+....
T Consensus 108 ~~~~~~~~d~~~~~~~~~~~--~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~-~~~~~~~~~~~~ 184 (330)
T PRK10749 108 ERFNDYVDDLAAFWQQEIQP--GPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPL-PSWMARRILNWA 184 (330)
T ss_pred ccHHHHHHHHHHHHHHHHhc--CCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCC-CcHHHHHHHHHH
Confidence 47899999999999887432 245789999999999999999999999999999999876543222 111112111111
Q ss_pred Hhhc---ccCcc-----cCccccchhhccChhH----HHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEEE
Q 018375 172 EEII---PKWKI-----VPTKDVIDSAFKDSIK----REEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFV 239 (357)
Q Consensus 172 ~~~~---~~~~~-----~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~ 239 (357)
.... ..... ................ .......+...............+.........+.++++|+|+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Li 264 (330)
T PRK10749 185 EGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITTPLLL 264 (330)
T ss_pred HHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEEE
Confidence 1110 00000 0000000001111111 1111122211111122333333333333445667889999999
Q ss_pred EeeCCCccCChHHHHHHHHHccC-----CCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHHh
Q 018375 240 LHGEADTVTDPEVSKALYERASS-----RDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDER 300 (357)
Q Consensus 240 i~g~~D~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~ 300 (357)
|+|++|.+++++.++.+++.++. +++++++++++||.++.|.+. ..+++.+.|.+||+++
T Consensus 265 i~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~-~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 265 LQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDA-MRSVALNAIVDFFNRH 329 (330)
T ss_pred EEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcH-HHHHHHHHHHHHHhhc
Confidence 99999999999999988887642 356899999999999987764 3567999999999764
No 8
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=1.1e-33 Score=235.94 Aligned_cols=262 Identities=20% Similarity=0.242 Sum_probs=171.6
Q ss_pred EEecCCcEEEEEEEcCCCCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCc------cccchh
Q 018375 22 IRNARGVQLFTCRWLPFSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARC------YIKKFE 95 (357)
Q Consensus 22 ~~~~~g~~l~~~~~~p~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~------~~~~~~ 95 (357)
..+.+|.+++|...++ ++|+|||+||+++++..| ..+++.|++. |+|+++|+||||.|+.+.. ..++++
T Consensus 12 ~~~~~~~~i~y~~~G~---~~~~vlllHG~~~~~~~w-~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~ 86 (294)
T PLN02824 12 TWRWKGYNIRYQRAGT---SGPALVLVHGFGGNADHW-RKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFE 86 (294)
T ss_pred eEEEcCeEEEEEEcCC---CCCeEEEECCCCCChhHH-HHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCHH
Confidence 3345899999988642 347899999999998877 8899999887 8999999999999986531 246899
Q ss_pred hHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHHHHHhhc
Q 018375 96 NIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTRVEEII 175 (357)
Q Consensus 96 ~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (357)
++++|+.++++.+ +.++++|+||||||.+++.+|.++|++|+++|++++....................+....
T Consensus 87 ~~a~~l~~~l~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (294)
T PLN02824 87 TWGEQLNDFCSDV------VGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLL 160 (294)
T ss_pred HHHHHHHHHHHHh------cCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHH
Confidence 9999999999998 6789999999999999999999999999999999986432211111111111111111100
Q ss_pred ccC-------cccCc----cccchhhccCh-h-HHHHHhhcccccCCccchHHHHHHHH--hhhhHhhccCCccccEEEE
Q 018375 176 PKW-------KIVPT----KDVIDSAFKDS-I-KREEIRNNKLIYQDKPRLKTALEMLR--TSMSLEDSLSKVMIPFFVL 240 (357)
Q Consensus 176 ~~~-------~~~~~----~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~Pvl~i 240 (357)
... ..... .......+... . .......................... ........+.++++|+|+|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi 240 (294)
T PLN02824 161 RETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIA 240 (294)
T ss_pred hchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEE
Confidence 000 00000 00000000000 0 00000000000000000111111111 1112234578899999999
Q ss_pred eeCCCccCChHHHHHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHHh
Q 018375 241 HGEADTVTDPEVSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDER 300 (357)
Q Consensus 241 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~ 300 (357)
+|++|.+++.+.++.+.+.. ++.++++++++||++++|+|++ +.+.|.+|++++
T Consensus 241 ~G~~D~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~~----~~~~i~~fl~~~ 294 (294)
T PLN02824 241 WGEKDPWEPVELGRAYANFD--AVEDFIVLPGVGHCPQDEAPEL----VNPLIESFVARH 294 (294)
T ss_pred EecCCCCCChHHHHHHHhcC--CccceEEeCCCCCChhhhCHHH----HHHHHHHHHhcC
Confidence 99999999999888876655 4689999999999999999999 999999999763
No 9
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=5.2e-33 Score=229.54 Aligned_cols=260 Identities=17% Similarity=0.151 Sum_probs=172.2
Q ss_pred EecCCcEEEEEEEcCCCCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHH
Q 018375 23 RNARGVQLFTCRWLPFSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCD 102 (357)
Q Consensus 23 ~~~~g~~l~~~~~~p~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~ 102 (357)
...+|.+++|..... +...++|||+||++++...| ..+++.|.+. |+|+++|+||||.|+.+.. .++++++++|+.
T Consensus 7 ~~~~~~~~~~~~~~~-~~~~~plvllHG~~~~~~~w-~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~~-~~~~~~~~~~~~ 82 (276)
T TIGR02240 7 IDLDGQSIRTAVRPG-KEGLTPLLIFNGIGANLELV-FPFIEALDPD-LEVIAFDVPGVGGSSTPRH-PYRFPGLAKLAA 82 (276)
T ss_pred eccCCcEEEEEEecC-CCCCCcEEEEeCCCcchHHH-HHHHHHhccC-ceEEEECCCCCCCCCCCCC-cCcHHHHHHHHH
Confidence 455889999977632 23346799999999998776 7888998765 9999999999999986543 358999999999
Q ss_pred HHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHHHHHhhcccCc-cc
Q 018375 103 DFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTRVEEIIPKWK-IV 181 (357)
Q Consensus 103 ~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 181 (357)
++++.+ +.++++|+||||||.+++.+|.++|++|+++|++++................ ............ ..
T Consensus 83 ~~i~~l------~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 155 (276)
T TIGR02240 83 RMLDYL------DYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMM-MASPRRYIQPSHGIH 155 (276)
T ss_pred HHHHHh------CcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHH-hcCchhhhccccccc
Confidence 999999 6789999999999999999999999999999999987643211111111000 000000000000 00
Q ss_pred Cccccchhhc-cChhHHHHHhhcccccCCccchHHHHHHHHh-hhhHhhccCCccccEEEEeeCCCccCChHHHHHHHHH
Q 018375 182 PTKDVIDSAF-KDSIKREEIRNNKLIYQDKPRLKTALEMLRT-SMSLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYER 259 (357)
Q Consensus 182 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~ 259 (357)
.........+ ..+......... ................ .......+.++++|+|+|+|++|.+++++.++.+.+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~ 232 (276)
T TIGR02240 156 IAPDIYGGAFRRDPELAMAHASK---VRSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWR 232 (276)
T ss_pred hhhhhccceeeccchhhhhhhhh---cccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHh
Confidence 0000000000 011000000000 0000000111111111 1122345788999999999999999999999999988
Q ss_pred ccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHHhccc
Q 018375 260 ASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDERMSD 303 (357)
Q Consensus 260 ~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~~~ 303 (357)
++ +++++++++ ||++++++|++ +++.|.+|+++.-+.
T Consensus 233 ~~--~~~~~~i~~-gH~~~~e~p~~----~~~~i~~fl~~~~~~ 269 (276)
T TIGR02240 233 IP--NAELHIIDD-GHLFLITRAEA----VAPIIMKFLAEERQR 269 (276)
T ss_pred CC--CCEEEEEcC-CCchhhccHHH----HHHHHHHHHHHhhhh
Confidence 84 789999986 99999999998 999999999875543
No 10
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1.6e-32 Score=228.94 Aligned_cols=262 Identities=13% Similarity=0.159 Sum_probs=168.3
Q ss_pred EecCCcEEEEEEEcCCCCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHH
Q 018375 23 RNARGVQLFTCRWLPFSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCD 102 (357)
Q Consensus 23 ~~~~g~~l~~~~~~p~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~ 102 (357)
.+.+|.+++|..++ ++++|||+||++++...| ..+++.|++. ++|+++|+||+|.|+.+.. .++++++++|+.
T Consensus 12 ~~~~g~~i~y~~~G----~g~~vvllHG~~~~~~~w-~~~~~~L~~~-~~via~D~~G~G~S~~~~~-~~~~~~~a~dl~ 84 (295)
T PRK03592 12 VEVLGSRMAYIETG----EGDPIVFLHGNPTSSYLW-RNIIPHLAGL-GRCLAPDLIGMGASDKPDI-DYTFADHARYLD 84 (295)
T ss_pred EEECCEEEEEEEeC----CCCEEEEECCCCCCHHHH-HHHHHHHhhC-CEEEEEcCCCCCCCCCCCC-CCCHHHHHHHHH
Confidence 34589999999874 346899999999887777 8899999988 5999999999999987654 358999999999
Q ss_pred HHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHHHHHhhc-ccCccc
Q 018375 103 DFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTRVEEII-PKWKIV 181 (357)
Q Consensus 103 ~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 181 (357)
++++.+ +.++++++||||||.+|+.++.++|++|+++|++++....................+.... ......
T Consensus 85 ~ll~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (295)
T PRK03592 85 AWFDAL------GLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEMVL 158 (295)
T ss_pred HHHHHh------CCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCccccccccc
Confidence 999998 6789999999999999999999999999999999985432111000111111111111100 000000
Q ss_pred Cccccchhhcc----ChhHHHHHhhcccccCCccchHHHHHH-------------HHhhhhHhhccCCccccEEEEeeCC
Q 018375 182 PTKDVIDSAFK----DSIKREEIRNNKLIYQDKPRLKTALEM-------------LRTSMSLEDSLSKVMIPFFVLHGEA 244 (357)
Q Consensus 182 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~i~~Pvl~i~g~~ 244 (357)
....+....+. .....+........+............ .....+....+.++++|+|+|+|++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~ 238 (295)
T PRK03592 159 EENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAEP 238 (295)
T ss_pred chhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEeccC
Confidence 00000000000 000000000000000000000000000 0011123345778999999999999
Q ss_pred CccCChHHHHHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHHhcc
Q 018375 245 DTVTDPEVSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDERMS 302 (357)
Q Consensus 245 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~~ 302 (357)
|.++++.....+..... +++++++++++||++++++|++ +++.|.+|+++...
T Consensus 239 D~~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~----v~~~i~~fl~~~~~ 291 (295)
T PRK03592 239 GAILTTGAIRDWCRSWP-NQLEITVFGAGLHFAQEDSPEE----IGAAIAAWLRRLRL 291 (295)
T ss_pred CcccCcHHHHHHHHHhh-hhcceeeccCcchhhhhcCHHH----HHHHHHHHHHHhcc
Confidence 99995555545544332 3789999999999999999999 99999999986543
No 11
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1.9e-32 Score=229.10 Aligned_cols=254 Identities=17% Similarity=0.169 Sum_probs=162.6
Q ss_pred cEEEEEEEcCCCCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCc-cccchhhHHHHHHHHHH
Q 018375 28 VQLFTCRWLPFSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARC-YIKKFENIVNDCDDFFK 106 (357)
Q Consensus 28 ~~l~~~~~~p~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~-~~~~~~~~~~d~~~~l~ 106 (357)
.+|+|...++ +.+|+|||+||++++...| ..+++.|.+.||+|+++|+||||.|+.+.. ..++++++++|+.++++
T Consensus 34 ~~i~y~~~G~--~~~~~lvliHG~~~~~~~w-~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~ 110 (302)
T PRK00870 34 LRMHYVDEGP--ADGPPVLLLHGEPSWSYLY-RKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFE 110 (302)
T ss_pred EEEEEEecCC--CCCCEEEEECCCCCchhhH-HHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHH
Confidence 6788887643 2357899999999887777 899999988899999999999999976542 23588999999999999
Q ss_pred HHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHHH--------HHhhcccC
Q 018375 107 SVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTR--------VEEIIPKW 178 (357)
Q Consensus 107 ~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 178 (357)
++ +.++++++||||||.+|+.+|.++|++|+++|++++........... ........ +.......
T Consensus 111 ~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 183 (302)
T PRK00870 111 QL------DLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPD-AFWAWRAFSQYSPVLPVGRLVNGG 183 (302)
T ss_pred Hc------CCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchH-HHhhhhcccccCchhhHHHHhhcc
Confidence 88 67899999999999999999999999999999998753221110000 00000000 00000000
Q ss_pred ccc-Cccccchhhc---cChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCCccCChHHHH
Q 018375 179 KIV-PTKDVIDSAF---KDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDPEVSK 254 (357)
Q Consensus 179 ~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~ 254 (357)
... ........+. .................... .... ..........+.++++|+++|+|++|.+++... +
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~ 258 (302)
T PRK00870 184 TVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSP-DDPA---VAANRAAWAVLERWDKPFLTAFSDSDPITGGGD-A 258 (302)
T ss_pred ccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCC-CCcc---hHHHHHHHHhhhcCCCceEEEecCCCCcccCch-H
Confidence 000 0000000000 00000000000000000000 0000 000111234567899999999999999999766 7
Q ss_pred HHHHHccCC-CceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHHh
Q 018375 255 ALYERASSR-DKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDER 300 (357)
Q Consensus 255 ~~~~~~~~~-~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~ 300 (357)
.+.+.+++. ++.+.+++++||++++++|++ +.+.|.+|++++
T Consensus 259 ~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~----~~~~l~~fl~~~ 301 (302)
T PRK00870 259 ILQKRIPGAAGQPHPTIKGAGHFLQEDSGEE----LAEAVLEFIRAT 301 (302)
T ss_pred HHHhhcccccccceeeecCCCccchhhChHH----HHHHHHHHHhcC
Confidence 788877531 223889999999999999998 999999999764
No 12
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=100.00 E-value=3.8e-32 Score=233.91 Aligned_cols=264 Identities=16% Similarity=0.187 Sum_probs=168.6
Q ss_pred eEEecCCcEEEEEEEcCCC-CCceEEEEEccCCccccccHHHHHHHHh---hCCcEEEEeCCCCCccCCCCCccccchhh
Q 018375 21 YIRNARGVQLFTCRWLPFS-TPKAVVFLCHGYGMECSGFMRECGTRLA---SAGYAVFGIDYEGHGRSRGARCYIKKFEN 96 (357)
Q Consensus 21 ~~~~~~g~~l~~~~~~p~~-~~~p~vv~lHG~~~~~~~~~~~~~~~l~---~~G~~vi~~d~~G~G~s~~~~~~~~~~~~ 96 (357)
.+.+.+|.+|+|...+|.+ ..+|+|||+||++++...|...+...|. +.+|+|+++|+||||.|+.+....+++++
T Consensus 179 ~~~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~ 258 (481)
T PLN03087 179 SWLSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLRE 258 (481)
T ss_pred eeEeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHH
Confidence 3445567899999998844 4468899999999987777334445555 36899999999999999876544568899
Q ss_pred HHHHHH-HHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHHHHHhhc
Q 018375 97 IVNDCD-DFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTRVEEII 175 (357)
Q Consensus 97 ~~~d~~-~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (357)
+++++. .+++.+ +.++++++||||||.+++.+|.++|++|+++|++++......... ............ .
T Consensus 259 ~a~~l~~~ll~~l------g~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~--~~~~~~~~~~~~-~ 329 (481)
T PLN03087 259 HLEMIERSVLERY------KVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGV--QATQYVMRKVAP-R 329 (481)
T ss_pred HHHHHHHHHHHHc------CCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccch--hHHHHHHHHhcc-c
Confidence 999984 778877 778999999999999999999999999999999997643321110 000000000000 0
Q ss_pred ccCcccCccccchhhc------------cChhHHHH----Hhhcc---------cccCCccchHHHHHHHHh-----hhh
Q 018375 176 PKWKIVPTKDVIDSAF------------KDSIKREE----IRNNK---------LIYQDKPRLKTALEMLRT-----SMS 225 (357)
Q Consensus 176 ~~~~~~~~~~~~~~~~------------~~~~~~~~----~~~~~---------~~~~~~~~~~~~~~~~~~-----~~~ 225 (357)
..+...........++ ........ ..... ........+......... ...
T Consensus 330 ~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~ 409 (481)
T PLN03087 330 RVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGY 409 (481)
T ss_pred ccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhH
Confidence 0000000000000000 00000000 00000 000000000010000100 011
Q ss_pred HhhccCCccccEEEEeeCCCccCChHHHHHHHHHccCCCceEEEcCCCCccccc-CCCChhhhhHHHHHHHHHHH
Q 018375 226 LEDSLSKVMIPFFVLHGEADTVTDPEVSKALYERASSRDKTIKLYPGMWHALTS-GEPDENIDIVFGDIIAWLDE 299 (357)
Q Consensus 226 ~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~p~~~~~~~~~~i~~fl~~ 299 (357)
......+|++|+|+++|++|.++|++..+.+.+.+ +++++++++++||.+++ ++|+. +++.|.+|+..
T Consensus 410 l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~i--P~a~l~vI~~aGH~~~v~e~p~~----fa~~L~~F~~~ 478 (481)
T PLN03087 410 LDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKV--PRARVKVIDDKDHITIVVGRQKE----FARELEEIWRR 478 (481)
T ss_pred HHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhC--CCCEEEEeCCCCCcchhhcCHHH----HHHHHHHHhhc
Confidence 12223468999999999999999999999999998 48999999999999885 89988 99999999854
No 13
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=7.2e-32 Score=213.19 Aligned_cols=269 Identities=20% Similarity=0.215 Sum_probs=180.4
Q ss_pred CCccceeeeeEEecCCcEEEEEEEcCCCCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCc-c
Q 018375 12 KTVVEYQEEYIRNARGVQLFTCRWLPFSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARC-Y 90 (357)
Q Consensus 12 ~~~~~~~~~~~~~~~g~~l~~~~~~p~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~-~ 90 (357)
.....--++.+.+.+|.+++|..-+ .+.+|+|+++||++.++..| +.....|+.+||+|+++|+||+|.|+.+.. .
T Consensus 16 ~~~~~~~~hk~~~~~gI~~h~~e~g--~~~gP~illlHGfPe~wysw-r~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~ 92 (322)
T KOG4178|consen 16 PLNLSAISHKFVTYKGIRLHYVEGG--PGDGPIVLLLHGFPESWYSW-RHQIPGLASRGYRVIAPDLRGYGFSDAPPHIS 92 (322)
T ss_pred ccChhhcceeeEEEccEEEEEEeec--CCCCCEEEEEccCCccchhh-hhhhhhhhhcceEEEecCCCCCCCCCCCCCcc
Confidence 3344455566667788888887763 45689999999999998887 889999999999999999999999998877 6
Q ss_pred ccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhH-------
Q 018375 91 IKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPV------- 163 (357)
Q Consensus 91 ~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~------- 163 (357)
.|++..++.|+..+++.+ +.++++++||+||+++|+.+|..+|++|+++|+++...... ...+...
T Consensus 93 ~Yt~~~l~~di~~lld~L------g~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p-~~~~~~~~~~~f~~ 165 (322)
T KOG4178|consen 93 EYTIDELVGDIVALLDHL------GLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNP-KLKPLDSSKAIFGK 165 (322)
T ss_pred eeeHHHHHHHHHHHHHHh------ccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCc-ccchhhhhccccCc
Confidence 789999999999999999 78999999999999999999999999999999998766511 1000000
Q ss_pred ------------HHH-----HHHHHHhhcccCc-----ccCc-cccchhhccChhHHHHHhhcccccCCccchHHHHHHH
Q 018375 164 ------------LVN-----ILTRVEEIIPKWK-----IVPT-KDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEML 220 (357)
Q Consensus 164 ------------~~~-----~~~~~~~~~~~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (357)
... ....+...+.... ..+. ......++ ....+......+ ....+...++.+
T Consensus 166 ~~y~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~----t~edi~~~~~~f-~~~g~~gplNyy 240 (322)
T KOG4178|consen 166 SYYICLFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWL----TEEDIAFYVSKF-QIDGFTGPLNYY 240 (322)
T ss_pred cceeEeccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchh----hHHHHHHHHhcc-ccccccccchhh
Confidence 000 0000000000000 0000 00000001 111111111111 111122222222
Q ss_pred Hhhh----hHhhccCCccccEEEEeeCCCccCChHH-HHHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHH
Q 018375 221 RTSM----SLEDSLSKVMIPFFVLHGEADTVTDPEV-SKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIA 295 (357)
Q Consensus 221 ~~~~----~~~~~~~~i~~Pvl~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~ 295 (357)
+... .....+.++++|+++++|+.|.+.+... ...+.+.++. ..+.++++|+||+.+.|+|++ +++.|.+
T Consensus 241 rn~~r~w~a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~-l~~~vv~~~~gH~vqqe~p~~----v~~~i~~ 315 (322)
T KOG4178|consen 241 RNFRRNWEAAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPR-LTERVVIEGIGHFVQQEKPQE----VNQAILG 315 (322)
T ss_pred HHHhhCchhccccccccccceEEEEecCcccccchhHHHHHHHhhcc-ccceEEecCCcccccccCHHH----HHHHHHH
Confidence 2221 2234567889999999999999988763 3333344432 348899999999999999999 9999999
Q ss_pred HHHHh
Q 018375 296 WLDER 300 (357)
Q Consensus 296 fl~~~ 300 (357)
|+++.
T Consensus 316 f~~~~ 320 (322)
T KOG4178|consen 316 FINSF 320 (322)
T ss_pred HHHhh
Confidence 99874
No 14
>PRK10673 acyl-CoA esterase; Provisional
Probab=100.00 E-value=1.5e-31 Score=218.97 Aligned_cols=249 Identities=12% Similarity=0.131 Sum_probs=164.5
Q ss_pred EEEEEEEcCC-CCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHH
Q 018375 29 QLFTCRWLPF-STPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKS 107 (357)
Q Consensus 29 ~l~~~~~~p~-~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~ 107 (357)
++.|+.+.|. ...+|+|||+||++++...| ..++..|++ +|+|+++|+||||.|..... ++++++++|+.+++++
T Consensus 2 ~~~~~~~~~~~~~~~~~iv~lhG~~~~~~~~-~~~~~~l~~-~~~vi~~D~~G~G~s~~~~~--~~~~~~~~d~~~~l~~ 77 (255)
T PRK10673 2 KLNIRAQTAQNPHNNSPIVLVHGLFGSLDNL-GVLARDLVN-DHDIIQVDMRNHGLSPRDPV--MNYPAMAQDLLDTLDA 77 (255)
T ss_pred cceeeeccCCCCCCCCCEEEECCCCCchhHH-HHHHHHHhh-CCeEEEECCCCCCCCCCCCC--CCHHHHHHHHHHHHHH
Confidence 4566776663 35678999999999987766 788888876 49999999999999987554 4889999999999999
Q ss_pred HHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHHHHHhhcccCcccCc---c
Q 018375 108 VCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTRVEEIIPKWKIVPT---K 184 (357)
Q Consensus 108 l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 184 (357)
+ +.++++|+||||||.+++.+|.++|++|+++|++++......... .......+...... ..... .
T Consensus 78 l------~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~ 146 (255)
T PRK10673 78 L------QIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRR----HDEIFAAINAVSEA-GATTRQQAA 146 (255)
T ss_pred c------CCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchh----hHHHHHHHHHhhhc-ccccHHHHH
Confidence 8 678899999999999999999999999999999975432211100 00111111110000 00000 0
Q ss_pred ccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCCccCChHHHHHHHHHccCCC
Q 018375 185 DVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYERASSRD 264 (357)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~ 264 (357)
...................................+.. ......+.++++|+|+|+|++|.+++.+..+.+.+.++ +
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~--~ 223 (255)
T PRK10673 147 AIMRQHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPH-IVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFP--Q 223 (255)
T ss_pred HHHHHhcCCHHHHHHHHhcCCcceeEeeHHHHHHhHHH-HhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCC--C
Confidence 00000111111111111000000000001111111111 11123467789999999999999999999998888874 8
Q ss_pred ceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHH
Q 018375 265 KTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDE 299 (357)
Q Consensus 265 ~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~ 299 (357)
+++.+++++||++++++|+. +.+.|.+||.+
T Consensus 224 ~~~~~~~~~gH~~~~~~p~~----~~~~l~~fl~~ 254 (255)
T PRK10673 224 ARAHVIAGAGHWVHAEKPDA----VLRAIRRYLND 254 (255)
T ss_pred cEEEEeCCCCCeeeccCHHH----HHHHHHHHHhc
Confidence 99999999999999999988 99999999975
No 15
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=5.5e-32 Score=220.70 Aligned_cols=237 Identities=15% Similarity=0.137 Sum_probs=156.7
Q ss_pred EEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCC-ccEEEE
Q 018375 44 VVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTD-KARFLY 122 (357)
Q Consensus 44 ~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~-~~v~lv 122 (357)
+|||+||++.+...| ..++..|.+.||+|+++|+||||.|+.+....++++++++|+.++++.+ +. ++++++
T Consensus 5 ~vvllHG~~~~~~~w-~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l------~~~~~~~lv 77 (255)
T PLN02965 5 HFVFVHGASHGAWCW-YKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDL------PPDHKVILV 77 (255)
T ss_pred EEEEECCCCCCcCcH-HHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhc------CCCCCEEEE
Confidence 599999999887776 8899999888899999999999999865444468999999999999998 55 599999
Q ss_pred EeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHHHHHhhcc----cCcccCc------cccchhh-c
Q 018375 123 GESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTRVEEIIP----KWKIVPT------KDVIDSA-F 191 (357)
Q Consensus 123 G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~------~~~~~~~-~ 191 (357)
||||||.+++.++.++|++|+++|++++......... ................ ....... ....... +
T Consensus 78 GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (255)
T PLN02965 78 GHSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSII-SPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYY 156 (255)
T ss_pred ecCcchHHHHHHHHhCchheeEEEEEccccCCCCCCc-cHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHHHh
Confidence 9999999999999999999999999998642211110 0101100000000000 0000000 0000000 0
Q ss_pred cChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCCccCChHHHHHHHHHccCCCceEEEcC
Q 018375 192 KDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYERASSRDKTIKLYP 271 (357)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (357)
........... . ........... ....+....+.++++|+++++|++|..+|+..++.+.+.++ ++++++++
T Consensus 157 ~~~~~~~~~~~-~-~~~~~~~~~~~----~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~--~a~~~~i~ 228 (255)
T PLN02965 157 NQSPLEDYTLS-S-KLLRPAPVRAF----QDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWP--PAQTYVLE 228 (255)
T ss_pred cCCCHHHHHHH-H-HhcCCCCCcch----hhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCC--cceEEEec
Confidence 00000000000 0 00000000000 00011222455789999999999999999999999999885 78999999
Q ss_pred CCCcccccCCCChhhhhHHHHHHHHHHHh
Q 018375 272 GMWHALTSGEPDENIDIVFGDIIAWLDER 300 (357)
Q Consensus 272 ~~gH~~~~~~p~~~~~~~~~~i~~fl~~~ 300 (357)
++||++++|+|++ +++.|.+|+++.
T Consensus 229 ~~GH~~~~e~p~~----v~~~l~~~~~~~ 253 (255)
T PLN02965 229 DSDHSAFFSVPTT----LFQYLLQAVSSL 253 (255)
T ss_pred CCCCchhhcCHHH----HHHHHHHHHHHh
Confidence 9999999999999 999999998754
No 16
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=1e-31 Score=228.68 Aligned_cols=258 Identities=21% Similarity=0.296 Sum_probs=164.4
Q ss_pred cCCc-EEEEEEEcCC--CCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHH
Q 018375 25 ARGV-QLFTCRWLPF--STPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDC 101 (357)
Q Consensus 25 ~~g~-~l~~~~~~p~--~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~ 101 (357)
.+|. +++|...+++ ....|+|||+||++++...| ..++..|.+ +|+|+++|+||||.|+.+....++++++++++
T Consensus 68 ~~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w-~~~~~~L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l 145 (360)
T PLN02679 68 WKGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPHW-RRNIGVLAK-NYTVYAIDLLGFGASDKPPGFSYTMETWAELI 145 (360)
T ss_pred ECCceeEEEEEecCcccCCCCCeEEEECCCCCCHHHH-HHHHHHHhc-CCEEEEECCCCCCCCCCCCCccccHHHHHHHH
Confidence 3566 9999887542 01347899999999987777 788888876 59999999999999987654446889999999
Q ss_pred HHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHh-cCCCcccEEEEeccccccccccC-ChhHHHH---HHHHHHhhcc
Q 018375 102 DDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHK-KDPSFWNGAVLVAPMCKISEKVK-PHPVLVN---ILTRVEEIIP 176 (357)
Q Consensus 102 ~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~-~~p~~v~~~vl~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~ 176 (357)
.++++.+ +.++++|+||||||.+++.++. .+|++|+++|++++......... ....... ....+.....
T Consensus 146 ~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (360)
T PLN02679 146 LDFLEEV------VQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLK 219 (360)
T ss_pred HHHHHHh------cCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhh
Confidence 9999988 6789999999999999999887 47999999999998643221110 0000000 0000000000
Q ss_pred cC-------cccCccccc----hhhcc-----ChhHHHHHhhcccccCCccchHHHHHHHHh--hhhHhhccCCccccEE
Q 018375 177 KW-------KIVPTKDVI----DSAFK-----DSIKREEIRNNKLIYQDKPRLKTALEMLRT--SMSLEDSLSKVMIPFF 238 (357)
Q Consensus 177 ~~-------~~~~~~~~~----~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~Pvl 238 (357)
.. ......... ...+. .......... ................. ..+....+.++++|+|
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtL 296 (360)
T PLN02679 220 QRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRG---PADDEGALDAFVSIVTGPPGPNPIKLIPRISLPIL 296 (360)
T ss_pred chhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHh---hccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEE
Confidence 00 000000000 00000 0001010000 00011111111111111 1123345778999999
Q ss_pred EEeeCCCccCChHHH-----HHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHH
Q 018375 239 VLHGEADTVTDPEVS-----KALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDE 299 (357)
Q Consensus 239 ~i~g~~D~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~ 299 (357)
+|+|++|.++|.... +.+.+.+ +++++++++++||++++|+|++ +++.|.+||++
T Consensus 297 ii~G~~D~~~p~~~~~~~~~~~l~~~i--p~~~l~~i~~aGH~~~~E~Pe~----~~~~I~~FL~~ 356 (360)
T PLN02679 297 VLWGDQDPFTPLDGPVGKYFSSLPSQL--PNVTLYVLEGVGHCPHDDRPDL----VHEKLLPWLAQ 356 (360)
T ss_pred EEEeCCCCCcCchhhHHHHHHhhhccC--CceEEEEcCCCCCCccccCHHH----HHHHHHHHHHh
Confidence 999999999987632 2344444 5899999999999999999999 99999999975
No 17
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=100.00 E-value=7.1e-31 Score=220.48 Aligned_cols=269 Identities=22% Similarity=0.380 Sum_probs=190.2
Q ss_pred EEecCCcEEEEEEEcCCCCCceEEEEEccCCcccc-c------------------------cHHHHHHHHhhCCcEEEEe
Q 018375 22 IRNARGVQLFTCRWLPFSTPKAVVFLCHGYGMECS-G------------------------FMRECGTRLASAGYAVFGI 76 (357)
Q Consensus 22 ~~~~~g~~l~~~~~~p~~~~~p~vv~lHG~~~~~~-~------------------------~~~~~~~~l~~~G~~vi~~ 76 (357)
+.+.||..|+++.|.|. .++.+||++||++.+.. . |...+++.|.++||.|+++
T Consensus 2 ~~~~~g~~l~~~~~~~~-~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~ 80 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVK-NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGL 80 (332)
T ss_pred ccCCCCCeEEEeeeecc-CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEe
Confidence 56779999999999875 56789999999998865 1 1146799999999999999
Q ss_pred CCCCCccCCCC---CccccchhhHHHHHHHHHHHHHhhh-----------------ccC-CccEEEEEeChhHHHHHHHH
Q 018375 77 DYEGHGRSRGA---RCYIKKFENIVNDCDDFFKSVCAQE-----------------EYT-DKARFLYGESMGGAVTLLLH 135 (357)
Q Consensus 77 d~~G~G~s~~~---~~~~~~~~~~~~d~~~~l~~l~~~~-----------------~~~-~~~v~lvG~S~Gg~~a~~~a 135 (357)
|+||||.|.+. .....+++++++|+..+++.+.+.. ..+ ..+++|+||||||.+++.++
T Consensus 81 D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~ 160 (332)
T TIGR01607 81 DLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLL 160 (332)
T ss_pred cccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHH
Confidence 99999999864 2233478999999999999875410 122 46899999999999999998
Q ss_pred hcCCC--------cccEEEEecccccccccc-----CChhHHHHHHHHHHhhcccCcccCccccchhhccChhHHHHHhh
Q 018375 136 KKDPS--------FWNGAVLVAPMCKISEKV-----KPHPVLVNILTRVEEIIPKWKIVPTKDVIDSAFKDSIKREEIRN 202 (357)
Q Consensus 136 ~~~p~--------~v~~~vl~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (357)
..+++ .++++|+++|........ ........+...+..+.+....... .....++...+....
T Consensus 161 ~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~----~~~~~~~~~~~~~~~ 236 (332)
T TIGR01607 161 ELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKK----IRYEKSPYVNDIIKF 236 (332)
T ss_pred HHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCc----cccccChhhhhHHhc
Confidence 75532 589999999886543211 1112222333333444443322110 112233344455555
Q ss_pred cccccCCccchHHHHHHHHhhhhHhhccCCc--cccEEEEeeCCCccCChHHHHHHHHHccCCCceEEEcCCCCcccccC
Q 018375 203 NKLIYQDKPRLKTALEMLRTSMSLEDSLSKV--MIPFFVLHGEADTVTDPEVSKALYERASSRDKTIKLYPGMWHALTSG 280 (357)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 280 (357)
++..+............+.........+.++ ++|+|+++|++|.+++++.++.+++.+..++++++++++++|.++.|
T Consensus 237 Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E 316 (332)
T TIGR01607 237 DKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVITIE 316 (332)
T ss_pred CccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCccC
Confidence 6655544455555555555544444455556 79999999999999999999999888765689999999999999976
Q ss_pred CCChhhhhHHHHHHHHHH
Q 018375 281 EPDENIDIVFGDIIAWLD 298 (357)
Q Consensus 281 ~p~~~~~~~~~~i~~fl~ 298 (357)
.. .+++.+.|.+||+
T Consensus 317 ~~---~~~v~~~i~~wL~ 331 (332)
T TIGR01607 317 PG---NEEVLKKIIEWIS 331 (332)
T ss_pred CC---HHHHHHHHHHHhh
Confidence 32 3459999999985
No 18
>PRK03204 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=2.3e-31 Score=219.99 Aligned_cols=259 Identities=12% Similarity=0.203 Sum_probs=161.7
Q ss_pred cceeeeeEEecCCcEEEEEEEcCCCCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccch
Q 018375 15 VEYQEEYIRNARGVQLFTCRWLPFSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKF 94 (357)
Q Consensus 15 ~~~~~~~~~~~~g~~l~~~~~~p~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~ 94 (357)
+.+++.++. .+|.+++|...+ .+|+|||+||++.+...| ..+...|.+. |+|+++|+||||.|+.+....++.
T Consensus 12 ~~~~~~~~~-~~~~~i~y~~~G----~~~~iv~lHG~~~~~~~~-~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~ 84 (286)
T PRK03204 12 YPFESRWFD-SSRGRIHYIDEG----TGPPILLCHGNPTWSFLY-RDIIVALRDR-FRCVAPDYLGFGLSERPSGFGYQI 84 (286)
T ss_pred ccccceEEE-cCCcEEEEEECC----CCCEEEEECCCCccHHHH-HHHHHHHhCC-cEEEEECCCCCCCCCCCCccccCH
Confidence 344555554 478899988753 357899999998776666 7888888764 999999999999998765444578
Q ss_pred hhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHHHHHhh
Q 018375 95 ENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTRVEEI 174 (357)
Q Consensus 95 ~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (357)
+++++++.++++.+ +.++++++||||||.+++.++..+|++|+++|++++......... ........ ...
T Consensus 85 ~~~~~~~~~~~~~~------~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~-~~~~~~~~---~~~ 154 (286)
T PRK03204 85 DEHARVIGEFVDHL------GLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLA-MKAFSRVM---SSP 154 (286)
T ss_pred HHHHHHHHHHHHHh------CCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchh-HHHHHHHh---ccc
Confidence 88999999999888 678999999999999999999999999999999887542111100 00000000 000
Q ss_pred cccCcccCccccchhhcc----ChhHHHHHhhcccccCCccchHHHHHH----HHhh----hhHhhccCC--ccccEEEE
Q 018375 175 IPKWKIVPTKDVIDSAFK----DSIKREEIRNNKLIYQDKPRLKTALEM----LRTS----MSLEDSLSK--VMIPFFVL 240 (357)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~----~~~~~~~~~--i~~Pvl~i 240 (357)
...........+....+. ............... ........... +... ......+.. +++|+|+|
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI 233 (286)
T PRK03204 155 PVQYAILRRNFFVERLIPAGTEHRPSSAVMAHYRAVQ-PNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLV 233 (286)
T ss_pred cchhhhhhhhHHHHHhccccccCCCCHHHHHHhcCCC-CCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEE
Confidence 000000000000000000 000000000000000 00000000000 0000 011111111 28999999
Q ss_pred eeCCCccCChH-HHHHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHH
Q 018375 241 HGEADTVTDPE-VSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWL 297 (357)
Q Consensus 241 ~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl 297 (357)
+|++|.++++. ..+.+.+.++ +.++++++++||++++|+|++ +++.|.+||
T Consensus 234 ~G~~D~~~~~~~~~~~~~~~ip--~~~~~~i~~aGH~~~~e~Pe~----~~~~i~~~~ 285 (286)
T PRK03204 234 WGMKDVAFRPKTILPRLRATFP--DHVLVELPNAKHFIQEDAPDR----IAAAIIERF 285 (286)
T ss_pred ecCCCcccCcHHHHHHHHHhcC--CCeEEEcCCCcccccccCHHH----HHHHHHHhc
Confidence 99999988654 5677778774 799999999999999999999 999999997
No 19
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.98 E-value=2e-30 Score=219.35 Aligned_cols=268 Identities=13% Similarity=0.143 Sum_probs=173.8
Q ss_pred CccceeeeeEEecCCcEEEEEEEcCCCCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCc---
Q 018375 13 TVVEYQEEYIRNARGVQLFTCRWLPFSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARC--- 89 (357)
Q Consensus 13 ~~~~~~~~~~~~~~g~~l~~~~~~p~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~--- 89 (357)
.++++........+|.+++|...++ ..+|+|||+||++++...| +.++..|++ +|+|+++|+||||.|+.+..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~y~~~G~--~~~~~ivllHG~~~~~~~w-~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~ 175 (383)
T PLN03084 100 FGLKMGAQSQASSDLFRWFCVESGS--NNNPPVLLIHGFPSQAYSY-RKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYG 175 (383)
T ss_pred ccccccceeEEcCCceEEEEEecCC--CCCCeEEEECCCCCCHHHH-HHHHHHHhc-CCEEEEECCCCCCCCCCCccccc
Confidence 3556666666778999999998753 2357899999999987777 788899976 69999999999999987643
Q ss_pred cccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHH
Q 018375 90 YIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILT 169 (357)
Q Consensus 90 ~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~ 169 (357)
..++++++++|+.++++.+ +.++++|+|||+||.+++.+|.++|++|+++|++++.........+ .....+..
T Consensus 176 ~~ys~~~~a~~l~~~i~~l------~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p-~~l~~~~~ 248 (383)
T PLN03084 176 FNYTLDEYVSSLESLIDEL------KSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLP-STLSEFSN 248 (383)
T ss_pred ccCCHHHHHHHHHHHHHHh------CCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccch-HHHHHHHH
Confidence 2468999999999999999 6789999999999999999999999999999999987532211111 11111100
Q ss_pred HH-HhhcccCcccCccccchhhccChhHHHHHhhcccccCCcc----chHHHHHHHHhh-----hhHhhc--cCCccccE
Q 018375 170 RV-EEIIPKWKIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKP----RLKTALEMLRTS-----MSLEDS--LSKVMIPF 237 (357)
Q Consensus 170 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-----~~~~~~--~~~i~~Pv 237 (357)
.+ ...+...............................+.... .+......+... ...... ..++++|+
T Consensus 249 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPv 328 (383)
T PLN03084 249 FLLGEIFSQDPLRASDKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPI 328 (383)
T ss_pred HHhhhhhhcchHHHHhhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCE
Confidence 00 0000000000000000000000000000000000000000 011111111100 011111 14679999
Q ss_pred EEEeeCCCccCChHHHHHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHH
Q 018375 238 FVLHGEADTVTDPEVSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLD 298 (357)
Q Consensus 238 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~ 298 (357)
|+|+|+.|.+++.+..+.+.+.. +.++++++++||++++|+|++ +++.|.+|+.
T Consensus 329 LiI~G~~D~~v~~~~~~~~a~~~---~a~l~vIp~aGH~~~~E~Pe~----v~~~I~~Fl~ 382 (383)
T PLN03084 329 TVCWGLRDRWLNYDGVEDFCKSS---QHKLIELPMAGHHVQEDCGEE----LGGIISGILS 382 (383)
T ss_pred EEEeeCCCCCcCHHHHHHHHHhc---CCeEEEECCCCCCcchhCHHH----HHHHHHHHhh
Confidence 99999999999999888877763 789999999999999999999 9999999985
No 20
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.98 E-value=7.1e-31 Score=215.33 Aligned_cols=252 Identities=15% Similarity=0.185 Sum_probs=165.8
Q ss_pred EEEEEEcCCCCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHH
Q 018375 30 LFTCRWLPFSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVC 109 (357)
Q Consensus 30 l~~~~~~p~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~ 109 (357)
++|..+++...+.|+|||+||++++...| ..++..|.+ +|+|+++|+||+|.|.......++++++++|+.++++.+
T Consensus 1 ~~~~~~~~~~~~~~~iv~lhG~~~~~~~~-~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~- 77 (257)
T TIGR03611 1 MHYELHGPPDADAPVVVLSSGLGGSGSYW-APQLDVLTQ-RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL- 77 (257)
T ss_pred CEEEEecCCCCCCCEEEEEcCCCcchhHH-HHHHHHHHh-ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh-
Confidence 46777765445678999999999987666 677787765 699999999999999876555568999999999999988
Q ss_pred hhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHHHHHhhcccCcccCcccc--c
Q 018375 110 AQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTRVEEIIPKWKIVPTKDV--I 187 (357)
Q Consensus 110 ~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 187 (357)
+..+++++||||||.+++.++.++|+.|+++|++++......... .........+............... .
T Consensus 78 -----~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (257)
T TIGR03611 78 -----NIERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTR--RCFDVRIALLQHAGPEAYVHAQALFLYP 150 (257)
T ss_pred -----CCCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHH--HHHHHHHHHHhccCcchhhhhhhhhhcc
Confidence 678899999999999999999999999999999998654321110 0000000011000000000000000 0
Q ss_pred hhhccC--hhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCCccCChHHHHHHHHHccCCCc
Q 018375 188 DSAFKD--SIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYERASSRDK 265 (357)
Q Consensus 188 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~ 265 (357)
..+... .............+............. ...+....+.++++|+++++|++|.++|++.++.+.+.++ ++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~ 227 (257)
T TIGR03611 151 ADWISENAARLAADEAHALAHFPGKANVLRRINAL-EAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALP--NA 227 (257)
T ss_pred ccHhhccchhhhhhhhhcccccCccHHHHHHHHHH-HcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcC--Cc
Confidence 000000 000000000000011111111111111 1123345677889999999999999999999999988874 78
Q ss_pred eEEEcCCCCcccccCCCChhhhhHHHHHHHHHH
Q 018375 266 TIKLYPGMWHALTSGEPDENIDIVFGDIIAWLD 298 (357)
Q Consensus 266 ~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~ 298 (357)
+++.++++||.+++++|++ +.+.|.+||+
T Consensus 228 ~~~~~~~~gH~~~~~~~~~----~~~~i~~fl~ 256 (257)
T TIGR03611 228 QLKLLPYGGHASNVTDPET----FNRALLDFLK 256 (257)
T ss_pred eEEEECCCCCCccccCHHH----HHHHHHHHhc
Confidence 9999999999999999988 9999999985
No 21
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.98 E-value=3.8e-31 Score=216.28 Aligned_cols=241 Identities=20% Similarity=0.280 Sum_probs=153.2
Q ss_pred EEEEEEcCCCCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHH
Q 018375 30 LFTCRWLPFSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVC 109 (357)
Q Consensus 30 l~~~~~~p~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~ 109 (357)
|+|..++ .+.|+|||+||++++...| ..+...|.+. |+|+++|+||||.|..... ++++++++++.+ +
T Consensus 4 ~~y~~~G---~g~~~ivllHG~~~~~~~w-~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~~--~~~~~~~~~l~~----~- 71 (256)
T PRK10349 4 IWWQTKG---QGNVHLVLLHGWGLNAEVW-RCIDEELSSH-FTLHLVDLPGFGRSRGFGA--LSLADMAEAVLQ----Q- 71 (256)
T ss_pred cchhhcC---CCCCeEEEECCCCCChhHH-HHHHHHHhcC-CEEEEecCCCCCCCCCCCC--CCHHHHHHHHHh----c-
Confidence 5566552 2335699999999998777 7899999876 9999999999999976432 366666555442 3
Q ss_pred hhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccC-Ch---hHHHHHHHHHHhhcccCcccCccc
Q 018375 110 AQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVK-PH---PVLVNILTRVEEIIPKWKIVPTKD 185 (357)
Q Consensus 110 ~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~ 185 (357)
..++++++||||||.+|+.+|.++|++|+++|++++......... +. .....+...+...... ....
T Consensus 72 -----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 142 (256)
T PRK10349 72 -----APDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQR----TVER 142 (256)
T ss_pred -----CCCCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHH----HHHH
Confidence 467899999999999999999999999999999987543321110 10 0111111110000000 0000
Q ss_pred cchh-hccChhHHH---HHhhc--ccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCCccCChHHHHHHHHH
Q 018375 186 VIDS-AFKDSIKRE---EIRNN--KLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYER 259 (357)
Q Consensus 186 ~~~~-~~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~ 259 (357)
+... .+....... ..... ................+ ...+....+.++++|+|+++|++|.++|.+.++.+.+.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~ 221 (256)
T PRK10349 143 FLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEIL-KTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKL 221 (256)
T ss_pred HHHHHHccCchHHHHHHHHHHHhhccCCCcHHHHHHHHHHH-HhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHh
Confidence 0000 000000000 00000 00000000111111111 12345567888999999999999999999988888888
Q ss_pred ccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHH
Q 018375 260 ASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLD 298 (357)
Q Consensus 260 ~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~ 298 (357)
++ ++++++++++||++++|+|+. |++.+.+|-+
T Consensus 222 i~--~~~~~~i~~~gH~~~~e~p~~----f~~~l~~~~~ 254 (256)
T PRK10349 222 WP--HSESYIFAKAAHAPFISHPAE----FCHLLVALKQ 254 (256)
T ss_pred CC--CCeEEEeCCCCCCccccCHHH----HHHHHHHHhc
Confidence 84 899999999999999999999 9999988854
No 22
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.98 E-value=2.5e-30 Score=214.60 Aligned_cols=258 Identities=20% Similarity=0.277 Sum_probs=169.6
Q ss_pred eEEecCCcEEEEEEEcCCCCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHH
Q 018375 21 YIRNARGVQLFTCRWLPFSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVND 100 (357)
Q Consensus 21 ~~~~~~g~~l~~~~~~p~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d 100 (357)
.+.+.+|.+++|...++ ...|+|||+||++++...| ..+.+.|++ +|+|+++|+||+|.|+.+....++++.+++|
T Consensus 9 ~~~~~~~~~~~~~~~g~--~~~~~vv~~hG~~~~~~~~-~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 84 (278)
T TIGR03056 9 RRVTVGPFHWHVQDMGP--TAGPLLLLLHGTGASTHSW-RDLMPPLAR-SFRVVAPDLPGHGFTRAPFRFRFTLPSMAED 84 (278)
T ss_pred ceeeECCEEEEEEecCC--CCCCeEEEEcCCCCCHHHH-HHHHHHHhh-CcEEEeecCCCCCCCCCccccCCCHHHHHHH
Confidence 34566999999988743 2357899999999987777 788888876 5999999999999998766544689999999
Q ss_pred HHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCC--hhHHHHHHHHHHhhcccC
Q 018375 101 CDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKP--HPVLVNILTRVEEIIPKW 178 (357)
Q Consensus 101 ~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 178 (357)
+.++++.+ +.++++|+||||||.+++.++.++|++++++|++++.......... .......... .......
T Consensus 85 l~~~i~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 157 (278)
T TIGR03056 85 LSALCAAE------GLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLAC-NPFTPPM 157 (278)
T ss_pred HHHHHHHc------CCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhh-cccchHH
Confidence 99999887 5678999999999999999999999999999999886542211100 0000000000 0000000
Q ss_pred --cccCccccchhhcc------ChhHHHHHhhcccccCCccchHHHHHHHHh--hhhHhhccCCccccEEEEeeCCCccC
Q 018375 179 --KIVPTKDVIDSAFK------DSIKREEIRNNKLIYQDKPRLKTALEMLRT--SMSLEDSLSKVMIPFFVLHGEADTVT 248 (357)
Q Consensus 179 --~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~Pvl~i~g~~D~~~ 248 (357)
............+. .......... ................. .......++++++|+++++|++|.++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~v 234 (278)
T TIGR03056 158 MSRGAADQQRVERLIRDTGSLLDKAGMTYYGR---LIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAV 234 (278)
T ss_pred HHhhcccCcchhHHhhccccccccchhhHHHH---hhcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCccc
Confidence 00000000000000 0000000000 00000000011111110 01123457788999999999999999
Q ss_pred ChHHHHHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHH
Q 018375 249 DPEVSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLD 298 (357)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~ 298 (357)
|.+..+.+.+.++ +++++.++++||+++++.|++ +++.|.+|++
T Consensus 235 p~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~p~~----~~~~i~~f~~ 278 (278)
T TIGR03056 235 PPDESKRAATRVP--TATLHVVPGGGHLVHEEQADG----VVGLILQAAE 278 (278)
T ss_pred CHHHHHHHHHhcc--CCeEEEECCCCCcccccCHHH----HHHHHHHHhC
Confidence 9999999888774 789999999999999999988 9999999984
No 23
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.98 E-value=1.1e-30 Score=217.03 Aligned_cols=250 Identities=16% Similarity=0.145 Sum_probs=157.0
Q ss_pred CcEEEEEEEcCCCCCceEEEEEccCCccccccHH--HHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHH
Q 018375 27 GVQLFTCRWLPFSTPKAVVFLCHGYGMECSGFMR--ECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDF 104 (357)
Q Consensus 27 g~~l~~~~~~p~~~~~p~vv~lHG~~~~~~~~~~--~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~ 104 (357)
|.+++|...+ ..|+|||+||++.+...|.. ..+..|.+.||+|+++|+||||.|+............++|+.++
T Consensus 19 ~~~~~y~~~g----~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~ 94 (282)
T TIGR03343 19 NFRIHYNEAG----NGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGL 94 (282)
T ss_pred ceeEEEEecC----CCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHH
Confidence 4567777642 35679999999887665521 23456667789999999999999986532111222467889999
Q ss_pred HHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCCh--hHHHHHHHHHHhhcccCcccC
Q 018375 105 FKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPH--PVLVNILTRVEEIIPKWKIVP 182 (357)
Q Consensus 105 l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 182 (357)
++.+ +.++++++||||||.+++.++.++|++|+++|++++........... .........+ .......
T Consensus 95 l~~l------~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 164 (282)
T TIGR03343 95 MDAL------DIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLY----AEPSYET 164 (282)
T ss_pred HHHc------CCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHh----cCCCHHH
Confidence 9888 78899999999999999999999999999999999753211111000 1111111100 0000000
Q ss_pred ccccchhh-c----cChhHHHHHhhcccccCCccchHHHHHHH----HhhhhHhhccCCccccEEEEeeCCCccCChHHH
Q 018375 183 TKDVIDSA-F----KDSIKREEIRNNKLIYQDKPRLKTALEML----RTSMSLEDSLSKVMIPFFVLHGEADTVTDPEVS 253 (357)
Q Consensus 183 ~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~ 253 (357)
........ + ............ ............... ....+....+.++++|+|+++|++|.+++++.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~ 242 (282)
T TIGR03343 165 LKQMLNVFLFDQSLITEELLQGRWEN--IQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHG 242 (282)
T ss_pred HHHHHhhCccCcccCcHHHHHhHHHH--hhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhH
Confidence 00000000 0 000000000000 000000000000000 011223445778999999999999999999999
Q ss_pred HHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHH
Q 018375 254 KALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLD 298 (357)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~ 298 (357)
+.+.+.++ ++++++++++||++++|+|+. +.+.|.+|++
T Consensus 243 ~~~~~~~~--~~~~~~i~~agH~~~~e~p~~----~~~~i~~fl~ 281 (282)
T TIGR03343 243 LKLLWNMP--DAQLHVFSRCGHWAQWEHADA----FNRLVIDFLR 281 (282)
T ss_pred HHHHHhCC--CCEEEEeCCCCcCCcccCHHH----HHHHHHHHhh
Confidence 99988884 899999999999999999999 9999999985
No 24
>PRK06489 hypothetical protein; Provisional
Probab=99.97 E-value=5.9e-30 Score=218.49 Aligned_cols=269 Identities=16% Similarity=0.189 Sum_probs=165.4
Q ss_pred ceeeeeEEe---cCCcEEEEEEEcCCC-----CCceEEEEEccCCccccccH-HHHHHHH-------hhCCcEEEEeCCC
Q 018375 16 EYQEEYIRN---ARGVQLFTCRWLPFS-----TPKAVVFLCHGYGMECSGFM-RECGTRL-------ASAGYAVFGIDYE 79 (357)
Q Consensus 16 ~~~~~~~~~---~~g~~l~~~~~~p~~-----~~~p~vv~lHG~~~~~~~~~-~~~~~~l-------~~~G~~vi~~d~~ 79 (357)
..+...+.. .+|.+++|..++... +.+|+|||+||++++...|+ ..+...| ..++|+|+++|+|
T Consensus 35 ~~~~~~~~~~~~~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~ 114 (360)
T PRK06489 35 VARDFTFHSGETLPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGI 114 (360)
T ss_pred eccceeccCCCCcCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCC
Confidence 334444444 578899999875311 01578999999999877764 2455444 2356999999999
Q ss_pred CCccCCCCCcc------ccchhhHHHHHHHHH-HHHHhhhccCCccEE-EEEeChhHHHHHHHHhcCCCcccEEEEeccc
Q 018375 80 GHGRSRGARCY------IKKFENIVNDCDDFF-KSVCAQEEYTDKARF-LYGESMGGAVTLLLHKKDPSFWNGAVLVAPM 151 (357)
Q Consensus 80 G~G~s~~~~~~------~~~~~~~~~d~~~~l-~~l~~~~~~~~~~v~-lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 151 (357)
|||.|+.+... .++++++++|+.+++ +.+ +.++++ |+||||||.+|+.+|.++|++|+++|++++.
T Consensus 115 GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~l------gi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~ 188 (360)
T PRK06489 115 GHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEGL------GVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQ 188 (360)
T ss_pred CCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHhc------CCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccC
Confidence 99999865421 357888888887755 666 667875 8999999999999999999999999999875
Q ss_pred cccccccCChhHHHHH-HHHHHhhcccCc---ccCccccchhh------------------ccChh-HHHHHhhcccccC
Q 018375 152 CKISEKVKPHPVLVNI-LTRVEEIIPKWK---IVPTKDVIDSA------------------FKDSI-KREEIRNNKLIYQ 208 (357)
Q Consensus 152 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~------------------~~~~~-~~~~~~~~~~~~~ 208 (357)
...... ........ ...... ...+. ........... ..... .............
T Consensus 189 ~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (360)
T PRK06489 189 PTEMSG--RNWMWRRMLIESIRN-DPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPV 265 (360)
T ss_pred cccccH--HHHHHHHHHHHHHHh-CCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhh
Confidence 421110 01101111 111110 00000 00000000000 00000 0000000000000
Q ss_pred CccchHHHHHHHH--hhhhHhhccCCccccEEEEeeCCCccCChHHH--HHHHHHccCCCceEEEcCCC----CcccccC
Q 018375 209 DKPRLKTALEMLR--TSMSLEDSLSKVMIPFFVLHGEADTVTDPEVS--KALYERASSRDKTIKLYPGM----WHALTSG 280 (357)
Q Consensus 209 ~~~~~~~~~~~~~--~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~--~~~~~~~~~~~~~~~~~~~~----gH~~~~~ 280 (357)
............ ...+....+.+|++|+|+|+|++|.++|++.+ +.+.+.+ ++.++++++++ ||.++ +
T Consensus 266 -~~~~~~~~~~~~~~~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~i--p~a~l~~i~~a~~~~GH~~~-e 341 (360)
T PRK06489 266 -TADANDFLYQWDSSRDYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRV--KHGRLVLIPASPETRGHGTT-G 341 (360)
T ss_pred -hcCHHHHHHHHHHhhccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhC--cCCeEEEECCCCCCCCcccc-c
Confidence 000111111111 12234566888999999999999999998865 7788887 48999999996 99997 8
Q ss_pred CCChhhhhHHHHHHHHHHHhc
Q 018375 281 EPDENIDIVFGDIIAWLDERM 301 (357)
Q Consensus 281 ~p~~~~~~~~~~i~~fl~~~~ 301 (357)
+|+. +++.|.+||+++-
T Consensus 342 ~P~~----~~~~i~~FL~~~~ 358 (360)
T PRK06489 342 SAKF----WKAYLAEFLAQVP 358 (360)
T ss_pred CHHH----HHHHHHHHHHhcc
Confidence 9988 9999999998654
No 25
>PLN02578 hydrolase
Probab=99.97 E-value=1.1e-29 Score=216.27 Aligned_cols=255 Identities=22% Similarity=0.328 Sum_probs=167.1
Q ss_pred eEEecCCcEEEEEEEcCCCCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHH
Q 018375 21 YIRNARGVQLFTCRWLPFSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVND 100 (357)
Q Consensus 21 ~~~~~~g~~l~~~~~~p~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d 100 (357)
.+.+.+|.+++|...+ ++|+|||+||++++...| ..+...|++. |+|+++|+||+|.|+.+.. .++.+.+++|
T Consensus 69 ~~~~~~~~~i~Y~~~g----~g~~vvliHG~~~~~~~w-~~~~~~l~~~-~~v~~~D~~G~G~S~~~~~-~~~~~~~a~~ 141 (354)
T PLN02578 69 NFWTWRGHKIHYVVQG----EGLPIVLIHGFGASAFHW-RYNIPELAKK-YKVYALDLLGFGWSDKALI-EYDAMVWRDQ 141 (354)
T ss_pred eEEEECCEEEEEEEcC----CCCeEEEECCCCCCHHHH-HHHHHHHhcC-CEEEEECCCCCCCCCCccc-ccCHHHHHHH
Confidence 4445578889988753 346799999999987666 7888888765 9999999999999987643 3588888999
Q ss_pred HHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCC--------hhHHHH-HHHHH
Q 018375 101 CDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKP--------HPVLVN-ILTRV 171 (357)
Q Consensus 101 ~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~--------~~~~~~-~~~~~ 171 (357)
+.++++.+ ..++++++|||+||.+++.+|.++|++|+++|++++.......... ...... +....
T Consensus 142 l~~~i~~~------~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (354)
T PLN02578 142 VADFVKEV------VKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPL 215 (354)
T ss_pred HHHHHHHh------ccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHH
Confidence 99999988 5688999999999999999999999999999999876433211100 000000 00000
Q ss_pred ----Hhhccc---CcccCcc---ccchhhccC-----hhHHHHHhhcccccCCccchHHHHHHHH------hhhhHhhcc
Q 018375 172 ----EEIIPK---WKIVPTK---DVIDSAFKD-----SIKREEIRNNKLIYQDKPRLKTALEMLR------TSMSLEDSL 230 (357)
Q Consensus 172 ----~~~~~~---~~~~~~~---~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 230 (357)
...... +...... ......+.+ ......... ................ ...+..+.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 292 (354)
T PLN02578 216 KEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITE---PAADPNAGEVYYRLMSRFLFNQSRYTLDSLL 292 (354)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHh---cccCCchHHHHHHHHHHHhcCCCCCCHHHHh
Confidence 000000 0000000 000000100 000000000 0000111111111111 112234567
Q ss_pred CCccccEEEEeeCCCccCChHHHHHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHH
Q 018375 231 SKVMIPFFVLHGEADTVTDPEVSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLD 298 (357)
Q Consensus 231 ~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~ 298 (357)
.++++|+++|+|++|.+++.+.++.+.+.++ +.+++++ ++||+++.|+|++ +++.|.+|++
T Consensus 293 ~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p--~a~l~~i-~~GH~~~~e~p~~----~~~~I~~fl~ 353 (354)
T PLN02578 293 SKLSCPLLLLWGDLDPWVGPAKAEKIKAFYP--DTTLVNL-QAGHCPHDEVPEQ----VNKALLEWLS 353 (354)
T ss_pred hcCCCCEEEEEeCCCCCCCHHHHHHHHHhCC--CCEEEEe-CCCCCccccCHHH----HHHHHHHHHh
Confidence 8899999999999999999999999888884 7888888 5899999999999 9999999985
No 26
>PLN02511 hydrolase
Probab=99.97 E-value=1.8e-28 Score=209.97 Aligned_cols=282 Identities=14% Similarity=0.134 Sum_probs=174.6
Q ss_pred ccceeeeeEEecCCcEEEEEEEcC----CCCCceEEEEEccCCccccc-cHHHHHHHHhhCCcEEEEeCCCCCccCCCCC
Q 018375 14 VVEYQEEYIRNARGVQLFTCRWLP----FSTPKAVVFLCHGYGMECSG-FMRECGTRLASAGYAVFGIDYEGHGRSRGAR 88 (357)
Q Consensus 14 ~~~~~~~~~~~~~g~~l~~~~~~p----~~~~~p~vv~lHG~~~~~~~-~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~ 88 (357)
.+.+++..+.+.||..+.+.++.+ ....+|+||++||+++++.. |+..++..+.+.||+|+++|+||||.|....
T Consensus 68 ~~~~~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~ 147 (388)
T PLN02511 68 AVRYRRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTT 147 (388)
T ss_pred CCceeEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCC
Confidence 345677788889999998876543 22457899999999776543 6567778888889999999999999997643
Q ss_pred ccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCc--ccEEEEeccccccccc---cCCh--
Q 018375 89 CYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSF--WNGAVLVAPMCKISEK---VKPH-- 161 (357)
Q Consensus 89 ~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~--v~~~vl~~~~~~~~~~---~~~~-- 161 (357)
... .....++|+.++++++..+ ++..+++++||||||.+++.++.++|++ |.++++++++.+.... ....
T Consensus 148 ~~~-~~~~~~~Dl~~~i~~l~~~--~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~~~ 224 (388)
T PLN02511 148 PQF-YSASFTGDLRQVVDHVAGR--YPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKGFN 224 (388)
T ss_pred cCE-EcCCchHHHHHHHHHHHHH--CCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhccHH
Confidence 322 2356788999999999543 3456899999999999999999999987 8888888776543110 0000
Q ss_pred hH-HHHHHHHHHhhcccCc-c-cCcc-cc-chhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCcccc
Q 018375 162 PV-LVNILTRVEEIIPKWK-I-VPTK-DV-IDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIP 236 (357)
Q Consensus 162 ~~-~~~~~~~~~~~~~~~~-~-~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 236 (357)
.. ...+...+........ . .... .+ ...........+................ +++. ..+....+.+|++|
T Consensus 225 ~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~---~yy~-~~s~~~~L~~I~vP 300 (388)
T PLN02511 225 NVYDKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVD---AYYS-NSSSSDSIKHVRVP 300 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHH---HHHH-HcCchhhhccCCCC
Confidence 00 0111111111110000 0 0000 00 0000000000000000000000111111 1111 12344578899999
Q ss_pred EEEEeeCCCccCChHHH-HHHHHHccCCCceEEEcCCCCcccccCCCChh--hhhHHHHHHHHHHHhcccc
Q 018375 237 FFVLHGEADTVTDPEVS-KALYERASSRDKTIKLYPGMWHALTSGEPDEN--IDIVFGDIIAWLDERMSDA 304 (357)
Q Consensus 237 vl~i~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~--~~~~~~~i~~fl~~~~~~~ 304 (357)
+|+|+|++|+++|.+.. ....+.. +++++++++++||..++|.|+.. ...+.+.+.+||+......
T Consensus 301 tLiI~g~dDpi~p~~~~~~~~~~~~--p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~~~~ 369 (388)
T PLN02511 301 LLCIQAANDPIAPARGIPREDIKAN--PNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALEEGK 369 (388)
T ss_pred eEEEEcCCCCcCCcccCcHhHHhcC--CCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHHHhc
Confidence 99999999999987654 3344444 58999999999999999998751 1125789999998876553
No 27
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.97 E-value=1.1e-28 Score=205.87 Aligned_cols=260 Identities=16% Similarity=0.192 Sum_probs=162.1
Q ss_pred EecCCcEEEEEEEcCCCCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCcc--ccchhhHHHH
Q 018375 23 RNARGVQLFTCRWLPFSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCY--IKKFENIVND 100 (357)
Q Consensus 23 ~~~~g~~l~~~~~~p~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~--~~~~~~~~~d 100 (357)
.+.++..+.|..+.+. +.+++|||+||++++...|+..+...+.+.||+|+++|+||+|.|..+... .++++++++|
T Consensus 7 ~~~~~~~~~~~~~~~~-~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~ 85 (288)
T TIGR01250 7 ITVDGGYHLFTKTGGE-GEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDE 85 (288)
T ss_pred ecCCCCeEEEEeccCC-CCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHH
Confidence 4557778888776532 335789999998776666667777777766999999999999999865432 2578999999
Q ss_pred HHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHH-H----HHHHHHhhc
Q 018375 101 CDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLV-N----ILTRVEEII 175 (357)
Q Consensus 101 ~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~ 175 (357)
+.++++.+ +.++++++||||||.+++.++..+|++++++|++++............... . ....+....
T Consensus 86 ~~~~~~~~------~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (288)
T TIGR01250 86 LEEVREKL------GLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLRKELPPEVRAAIKRCE 159 (288)
T ss_pred HHHHHHHc------CCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHHhhcChhHHHHHHHHH
Confidence 99998888 677899999999999999999999999999999987643221100000000 0 000000000
Q ss_pred ccCcccCc--cccchhhc-----cChhHHHHHhhcccc--------cCCccchHHHHHHHHhhhhHhhccCCccccEEEE
Q 018375 176 PKWKIVPT--KDVIDSAF-----KDSIKREEIRNNKLI--------YQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVL 240 (357)
Q Consensus 176 ~~~~~~~~--~~~~~~~~-----~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i 240 (357)
........ ........ ............... ......+. ........+....+.++++|++++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~i~~P~lii 237 (288)
T TIGR01250 160 ASGDYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFT--ITGNLKDWDITDKLSEIKVPTLLT 237 (288)
T ss_pred hccCcchHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCcccc--ccccccccCHHHHhhccCCCEEEE
Confidence 00000000 00000000 000000000000000 00000000 000000113344567899999999
Q ss_pred eeCCCccCChHHHHHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHH
Q 018375 241 HGEADTVTDPEVSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLD 298 (357)
Q Consensus 241 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~ 298 (357)
+|++|.+ ++...+.+.+.++ ++++++++++||++++++|++ +.+.|.+||+
T Consensus 238 ~G~~D~~-~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~p~~----~~~~i~~fl~ 288 (288)
T TIGR01250 238 VGEFDTM-TPEAAREMQELIA--GSRLVVFPDGSHMTMIEDPEV----YFKLLSDFIR 288 (288)
T ss_pred ecCCCcc-CHHHHHHHHHhcc--CCeEEEeCCCCCCcccCCHHH----HHHHHHHHhC
Confidence 9999985 5677788877774 789999999999999999998 9999999974
No 28
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.97 E-value=1e-29 Score=215.67 Aligned_cols=255 Identities=12% Similarity=0.068 Sum_probs=157.1
Q ss_pred CCcEEEEEEEcCCCCCceEEEEEccCCccccc-----------cHHHHHH---HHhhCCcEEEEeCCCCCccCCCCCccc
Q 018375 26 RGVQLFTCRWLPFSTPKAVVFLCHGYGMECSG-----------FMRECGT---RLASAGYAVFGIDYEGHGRSRGARCYI 91 (357)
Q Consensus 26 ~g~~l~~~~~~p~~~~~p~vv~lHG~~~~~~~-----------~~~~~~~---~l~~~G~~vi~~d~~G~G~s~~~~~~~ 91 (357)
+|.+|+|..+++ .+.| +||+||+.++... ||..++. .|...+|+|+++|+||+|.|... .
T Consensus 44 ~~~~l~y~~~G~--~~~p-~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~---~ 117 (343)
T PRK08775 44 EDLRLRYELIGP--AGAP-VVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLDV---P 117 (343)
T ss_pred CCceEEEEEecc--CCCC-EEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCCC---C
Confidence 688999998753 1234 6777666655442 5577775 56444699999999999988432 2
Q ss_pred cchhhHHHHHHHHHHHHHhhhccCCcc-EEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHHH
Q 018375 92 KKFENIVNDCDDFFKSVCAQEEYTDKA-RFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTR 170 (357)
Q Consensus 92 ~~~~~~~~d~~~~l~~l~~~~~~~~~~-v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~ 170 (357)
++++++++|+.++++.+ +.++ ++|+||||||++|+.+|.++|++|+++|++++....... ..........
T Consensus 118 ~~~~~~a~dl~~ll~~l------~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~---~~~~~~~~~~ 188 (343)
T PRK08775 118 IDTADQADAIALLLDAL------GIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPY---AAAWRALQRR 188 (343)
T ss_pred CCHHHHHHHHHHHHHHc------CCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHH---HHHHHHHHHH
Confidence 47788999999999998 6666 479999999999999999999999999999986542210 0000110000
Q ss_pred HHhhcccCcccCcc-ccch----hhccChh-HHHHHhhccc-------------------ccCCccchHHHHHHHHhhhh
Q 018375 171 VEEIIPKWKIVPTK-DVID----SAFKDSI-KREEIRNNKL-------------------IYQDKPRLKTALEMLRTSMS 225 (357)
Q Consensus 171 ~~~~~~~~~~~~~~-~~~~----~~~~~~~-~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~ 225 (357)
.............. .... ....... .......... ....................
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (343)
T PRK08775 189 AVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESIDL 268 (343)
T ss_pred HHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHHhh
Confidence 00000000000000 0000 0000000 0000000000 00000000000000000000
Q ss_pred HhhccCCccccEEEEeeCCCccCChHHHHHHHHHccCCCceEEEcCC-CCcccccCCCChhhhhHHHHHHHHHHHh
Q 018375 226 LEDSLSKVMIPFFVLHGEADTVTDPEVSKALYERASSRDKTIKLYPG-MWHALTSGEPDENIDIVFGDIIAWLDER 300 (357)
Q Consensus 226 ~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~p~~~~~~~~~~i~~fl~~~ 300 (357)
....+.+|++|+|+++|++|.++|++..+.+.+.+. ++++++++++ +||.+++|+|++ |++.|.+||.+.
T Consensus 269 ~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~-p~a~l~~i~~~aGH~~~lE~Pe~----~~~~l~~FL~~~ 339 (343)
T PRK08775 269 HRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLG-PRGSLRVLRSPYGHDAFLKETDR----IDAILTTALRST 339 (343)
T ss_pred cCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcC-CCCeEEEEeCCccHHHHhcCHHH----HHHHHHHHHHhc
Confidence 112467899999999999999999998888888885 3799999985 999999999999 999999999764
No 29
>PRK07581 hypothetical protein; Validated
Probab=99.97 E-value=8.4e-29 Score=210.34 Aligned_cols=261 Identities=14% Similarity=0.069 Sum_probs=159.0
Q ss_pred cCCcEEEEEEEcCCC-CCceEEEEEccCCccccccHHHHH---HHHhhCCcEEEEeCCCCCccCCCCCc--cccchhh--
Q 018375 25 ARGVQLFTCRWLPFS-TPKAVVFLCHGYGMECSGFMRECG---TRLASAGYAVFGIDYEGHGRSRGARC--YIKKFEN-- 96 (357)
Q Consensus 25 ~~g~~l~~~~~~p~~-~~~p~vv~lHG~~~~~~~~~~~~~---~~l~~~G~~vi~~d~~G~G~s~~~~~--~~~~~~~-- 96 (357)
.+|.+|+|..+++.. .+.|+||++||++++...| ..+. ..|...+|+||++|+||||.|+.+.. ..+++++
T Consensus 23 ~~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~-~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 101 (339)
T PRK07581 23 LPDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDN-EWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFP 101 (339)
T ss_pred cCCceEEEEecCccCCCCCCEEEEeCCCCCCcccc-hhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCC
Confidence 367889999987532 3446677777777665544 4332 36665679999999999999976532 1234332
Q ss_pred ---HHHHHHH----HHHHHHhhhccCCcc-EEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHH
Q 018375 97 ---IVNDCDD----FFKSVCAQEEYTDKA-RFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNIL 168 (357)
Q Consensus 97 ---~~~d~~~----~l~~l~~~~~~~~~~-v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~ 168 (357)
+++|+.+ +++.+ +.++ ++||||||||++|+.+|.++|++|+++|++++....... .........
T Consensus 102 ~~~~~~~~~~~~~~l~~~l------gi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~--~~~~~~~~~ 173 (339)
T PRK07581 102 HVTIYDNVRAQHRLLTEKF------GIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPH--NFVFLEGLK 173 (339)
T ss_pred ceeHHHHHHHHHHHHHHHh------CCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHH--HHHHHHHHH
Confidence 4566665 44556 6788 479999999999999999999999999999876532110 000000000
Q ss_pred HHHHhhcccCcccCcc----c--------c-----chhhccC------------hhHHHHHhhcccccCCccchHHHHHH
Q 018375 169 TRVEEIIPKWKIVPTK----D--------V-----IDSAFKD------------SIKREEIRNNKLIYQDKPRLKTALEM 219 (357)
Q Consensus 169 ~~~~~~~~~~~~~~~~----~--------~-----~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (357)
..+.. .+.+...... . . ....+.. ........... ...........+..
T Consensus 174 ~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~ 251 (339)
T PRK07581 174 AALTA-DPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNF-LPRDPNNLLAMLWT 251 (339)
T ss_pred HHHHh-CCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhh-cccCcccHHHHHHH
Confidence 00000 0000000000 0 0 0000000 00000000000 00011111111111
Q ss_pred HH------h---hhhHhhccCCccccEEEEeeCCCccCChHHHHHHHHHccCCCceEEEcCC-CCcccccCCCChhhhhH
Q 018375 220 LR------T---SMSLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYERASSRDKTIKLYPG-MWHALTSGEPDENIDIV 289 (357)
Q Consensus 220 ~~------~---~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~p~~~~~~~ 289 (357)
.. . ..+....+.+|++|+|+|+|++|.++|+..++.+.+.++ +++++++++ +||..++++++. +
T Consensus 252 ~~~~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip--~a~l~~i~~~~GH~~~~~~~~~----~ 325 (339)
T PRK07581 252 WQRGDISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIP--NAELRPIESIWGHLAGFGQNPA----D 325 (339)
T ss_pred hhhcccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCC--CCeEEEeCCCCCccccccCcHH----H
Confidence 11 0 114456778899999999999999999999999888884 799999999 999999999999 9
Q ss_pred HHHHHHHHHHhcc
Q 018375 290 FGDIIAWLDERMS 302 (357)
Q Consensus 290 ~~~i~~fl~~~~~ 302 (357)
...|.+|+++.+.
T Consensus 326 ~~~~~~~~~~~~~ 338 (339)
T PRK07581 326 IAFIDAALKELLA 338 (339)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988754
No 30
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.97 E-value=6.1e-29 Score=197.07 Aligned_cols=276 Identities=19% Similarity=0.231 Sum_probs=164.3
Q ss_pred ccceeeeeEEecCCcEEEEEEEcCCCCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccc
Q 018375 14 VVEYQEEYIRNARGVQLFTCRWLPFSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKK 93 (357)
Q Consensus 14 ~~~~~~~~~~~~~g~~l~~~~~~p~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~ 93 (357)
.+.+...++...++..+......+....+.++|++||+|++...|+.. .+.|++ .++|+++|++|+|.|+.+.-.. +
T Consensus 62 ~v~~~~~~v~i~~~~~iw~~~~~~~~~~~~plVliHGyGAg~g~f~~N-f~~La~-~~~vyaiDllG~G~SSRP~F~~-d 138 (365)
T KOG4409|consen 62 PVPYSKKYVRIPNGIEIWTITVSNESANKTPLVLIHGYGAGLGLFFRN-FDDLAK-IRNVYAIDLLGFGRSSRPKFSI-D 138 (365)
T ss_pred CCCcceeeeecCCCceeEEEeecccccCCCcEEEEeccchhHHHHHHh-hhhhhh-cCceEEecccCCCCCCCCCCCC-C
Confidence 445556666666777887777777667788899999999998877544 466766 5999999999999999876432 1
Q ss_pred hhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccc------c-CChhHHHH
Q 018375 94 FENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEK------V-KPHPVLVN 166 (357)
Q Consensus 94 ~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~------~-~~~~~~~~ 166 (357)
.........+-+++.+. ..+..+.+|+|||+||++|..+|.+||++|+.+||++|+...... . .+..+...
T Consensus 139 ~~~~e~~fvesiE~WR~--~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~ 216 (365)
T KOG4409|consen 139 PTTAEKEFVESIEQWRK--KMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKA 216 (365)
T ss_pred cccchHHHHHHHHHHHH--HcCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhh
Confidence 11111233333333322 227889999999999999999999999999999999998755422 1 11122211
Q ss_pred HHHHHHhhcccCcccCcc----ccchh----hcc-Ch-hHHHHH--hhcccccCCccchHHHHHHHH-----hhhhHhhc
Q 018375 167 ILTRVEEIIPKWKIVPTK----DVIDS----AFK-DS-IKREEI--RNNKLIYQDKPRLKTALEMLR-----TSMSLEDS 229 (357)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~----~~~~~----~~~-~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 229 (357)
+......+.+...+.... .+... .+. -+ ...+.. ..........+.-...+..+. +...+.+.
T Consensus 217 ~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r 296 (365)
T KOG4409|consen 217 LFLVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQR 296 (365)
T ss_pred hhhhhhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHH
Confidence 111111111110000000 00000 000 00 000000 000011111121111111111 12233334
Q ss_pred cCCc--cccEEEEeeCCCccCChHHHHHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHH
Q 018375 230 LSKV--MIPFFVLHGEADTVTDPEVSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDE 299 (357)
Q Consensus 230 ~~~i--~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~ 299 (357)
+..+ ++|+++|+|++|.+-. .....+.+.+....++.+++|++||.+++++|+. |++.+..++++
T Consensus 297 ~~~l~~~~pv~fiyG~~dWmD~-~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~----Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 297 LRELKKDVPVTFIYGDRDWMDK-NAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEF----FNQIVLEECDK 363 (365)
T ss_pred HHhhccCCCEEEEecCcccccc-hhHHHHHHHhhcccceEEEecCCCceeecCCHHH----HHHHHHHHHhc
Confidence 4444 4999999999997654 4444555543434799999999999999999999 88888888865
No 31
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.97 E-value=2.3e-29 Score=204.21 Aligned_cols=227 Identities=16% Similarity=0.231 Sum_probs=145.7
Q ss_pred ceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEEE
Q 018375 42 KAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFL 121 (357)
Q Consensus 42 ~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l 121 (357)
+|+|||+||++++...| ..+.+.| + +|+|+++|+||||.|..+... +++++++|+.++++.+ +.+++++
T Consensus 2 ~p~vvllHG~~~~~~~w-~~~~~~l-~-~~~vi~~D~~G~G~S~~~~~~--~~~~~~~~l~~~l~~~------~~~~~~l 70 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDW-QPVGEAL-P-DYPRLYIDLPGHGGSAAISVD--GFADVSRLLSQTLQSY------NILPYWL 70 (242)
T ss_pred CCEEEEECCCCCChHHH-HHHHHHc-C-CCCEEEecCCCCCCCCCcccc--CHHHHHHHHHHHHHHc------CCCCeEE
Confidence 46799999999998777 8888888 3 599999999999999876543 8899999999999988 6789999
Q ss_pred EEeChhHHHHHHHHhcCCCc-ccEEEEeccccccccccCChhHHHHHHH--HHHhhcccCcccCccccchhhc-------
Q 018375 122 YGESMGGAVTLLLHKKDPSF-WNGAVLVAPMCKISEKVKPHPVLVNILT--RVEEIIPKWKIVPTKDVIDSAF------- 191 (357)
Q Consensus 122 vG~S~Gg~~a~~~a~~~p~~-v~~~vl~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~------- 191 (357)
+||||||.+|+.+|.++|+. |++++++++........ ........ .+...+... ........++
T Consensus 71 vG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 144 (242)
T PRK11126 71 VGYSLGGRIAMYYACQGLAGGLCGLIVEGGNPGLQNAE---ERQARWQNDRQWAQRFRQE---PLEQVLADWYQQPVFAS 144 (242)
T ss_pred EEECHHHHHHHHHHHhCCcccccEEEEeCCCCCCCCHH---HHHHHHhhhHHHHHHhccC---cHHHHHHHHHhcchhhc
Confidence 99999999999999998764 99999998764332110 00000000 000000000 0000000000
Q ss_pred -cChhHHHHHhhcccccCCccchHHHHHHH--HhhhhHhhccCCccccEEEEeeCCCccCChHHHHHHHHHccCCCceEE
Q 018375 192 -KDSIKREEIRNNKLIYQDKPRLKTALEML--RTSMSLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYERASSRDKTIK 268 (357)
Q Consensus 192 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 268 (357)
............. .............. ....+....+.++++|+++++|++|..+. .+.+.. +++++
T Consensus 145 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~~---~~~~~ 214 (242)
T PRK11126 145 LNAEQRQQLVAKRS--NNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQL---ALPLH 214 (242)
T ss_pred cCccHHHHHHHhcc--cCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHHh---cCeEE
Confidence 0000000000000 00000011111100 01123445678899999999999998552 223332 78999
Q ss_pred EcCCCCcccccCCCChhhhhHHHHHHHHHHH
Q 018375 269 LYPGMWHALTSGEPDENIDIVFGDIIAWLDE 299 (357)
Q Consensus 269 ~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~ 299 (357)
+++++||++++|+|++ +++.|.+|+++
T Consensus 215 ~i~~~gH~~~~e~p~~----~~~~i~~fl~~ 241 (242)
T PRK11126 215 VIPNAGHNAHRENPAA----FAASLAQILRL 241 (242)
T ss_pred EeCCCCCchhhhChHH----HHHHHHHHHhh
Confidence 9999999999999999 99999999965
No 32
>PRK13604 luxD acyl transferase; Provisional
Probab=99.97 E-value=3.6e-28 Score=194.98 Aligned_cols=244 Identities=12% Similarity=0.089 Sum_probs=166.8
Q ss_pred eeeeeEEecCCcEEEEEEEcCC---CCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCC-ccCCCCCcccc
Q 018375 17 YQEEYIRNARGVQLFTCRWLPF---STPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGH-GRSRGARCYIK 92 (357)
Q Consensus 17 ~~~~~~~~~~g~~l~~~~~~p~---~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~-G~s~~~~~~~~ 92 (357)
..++.+.+.||.+|.+++..|. ..+.++||++||++..... +..+++.|+++||.|+.+|+||+ |.|++.... .
T Consensus 9 ~~~~~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~-~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~-~ 86 (307)
T PRK13604 9 TIDHVICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMDH-FAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDE-F 86 (307)
T ss_pred chhheEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHH-HHHHHHHHHHCCCEEEEecCCCCCCCCCCcccc-C
Confidence 4456778889999999999984 3466899999999997544 58999999999999999999987 999775433 2
Q ss_pred chhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHHHHH
Q 018375 93 KFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTRVE 172 (357)
Q Consensus 93 ~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (357)
+......|+.+++++++.+ +..++.|+||||||.+|+..|...+ ++++|+.+|+....+... . .+.
T Consensus 87 t~s~g~~Dl~aaid~lk~~---~~~~I~LiG~SmGgava~~~A~~~~--v~~lI~~sp~~~l~d~l~------~---~~~ 152 (307)
T PRK13604 87 TMSIGKNSLLTVVDWLNTR---GINNLGLIAASLSARIAYEVINEID--LSFLITAVGVVNLRDTLE------R---ALG 152 (307)
T ss_pred cccccHHHHHHHHHHHHhc---CCCceEEEEECHHHHHHHHHhcCCC--CCEEEEcCCcccHHHHHH------H---hhh
Confidence 4445689999999999664 4578999999999999977776443 999999999876442111 0 000
Q ss_pred hhcccCcccCccccchhhccChhHHHHHhhcccccCCccc-hHHHHHHH-H----hhhhHhhccCCccccEEEEeeCCCc
Q 018375 173 EIIPKWKIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPR-LKTALEML-R----TSMSLEDSLSKVMIPFFVLHGEADT 246 (357)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~----~~~~~~~~~~~i~~Pvl~i~g~~D~ 246 (357)
.....+.......... +..... ........ . ......+.+.+++.|+|+|||+.|.
T Consensus 153 ~~~~~~p~~~lp~~~d------------------~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~ 214 (307)
T PRK13604 153 YDYLSLPIDELPEDLD------------------FEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTANNDS 214 (307)
T ss_pred cccccCcccccccccc------------------cccccccHHHHHHHHHhcCccccccHHHHHhhcCCCEEEEEcCCCC
Confidence 0000000000000000 000000 00000000 0 0112234466778999999999999
Q ss_pred cCChHHHHHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHHhccc
Q 018375 247 VTDPEVSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDERMSD 303 (357)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~~~ 303 (357)
+||.+.++.+++.+...+++++++||++|.+. +++ -.+.+|.+...+.
T Consensus 215 lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~-~~~--------~~~~~~~~~~~~~ 262 (307)
T PRK13604 215 WVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLG-ENL--------VVLRNFYQSVTKA 262 (307)
T ss_pred ccCHHHHHHHHHHhccCCcEEEEeCCCccccC-cch--------HHHHHHHHHHHHH
Confidence 99999999999998656899999999999987 332 3466777766544
No 33
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.97 E-value=1.7e-28 Score=181.33 Aligned_cols=228 Identities=23% Similarity=0.329 Sum_probs=166.5
Q ss_pred ceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEEE
Q 018375 42 KAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFL 121 (357)
Q Consensus 42 ~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l 121 (357)
+.+|+++||+.++.... +.+++.|.++||.|.++.+||||......- ..++++|.+|+.+..++|.+. +.+.|.+
T Consensus 15 ~~AVLllHGFTGt~~Dv-r~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl-~t~~~DW~~~v~d~Y~~L~~~---gy~eI~v 89 (243)
T COG1647 15 NRAVLLLHGFTGTPRDV-RMLGRYLNENGYTVYAPRYPGHGTLPEDFL-KTTPRDWWEDVEDGYRDLKEA---GYDEIAV 89 (243)
T ss_pred CEEEEEEeccCCCcHHH-HHHHHHHHHCCceEecCCCCCCCCCHHHHh-cCCHHHHHHHHHHHHHHHHHc---CCCeEEE
Confidence 37899999999998887 899999999999999999999998753222 247899999999999999643 6789999
Q ss_pred EEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHHHHHhhcccCcccCccccchhhccChhHHHHHh
Q 018375 122 YGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTRVEEIIPKWKIVPTKDVIDSAFKDSIKREEIR 201 (357)
Q Consensus 122 vG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (357)
+|.||||.+|+.+|..+| ++++|.++++....+..................... ..........
T Consensus 90 ~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k--------------~~e~~~~e~~ 153 (243)
T COG1647 90 VGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGK--------------DQEQIDKEMK 153 (243)
T ss_pred EeecchhHHHHHHHhhCC--ccceeeecCCcccccchhhhHHHHHHHHHhhhccCC--------------CHHHHHHHHH
Confidence 999999999999999999 899999998876543321111111111111110000 0001111111
Q ss_pred hcccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCCccCChHHHHHHHHHccCCCceEEEcCCCCcccccCC
Q 018375 202 NNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYERASSRDKTIKLYPGMWHALTSGE 281 (357)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 281 (357)
. +.. ..............+....+..|..|++++.|.+|+++|.+.+..+++.+.+.+.++.+++++||.+..
T Consensus 154 ~----~~~-~~~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~-- 226 (243)
T COG1647 154 S----YKD-TPMTTTAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITL-- 226 (243)
T ss_pred H----hhc-chHHHHHHHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeec--
Confidence 1 110 011222233333456677889999999999999999999999999999998888999999999999885
Q ss_pred CChhhhhHHHHHHHHHH
Q 018375 282 PDENIDIVFGDIIAWLD 298 (357)
Q Consensus 282 p~~~~~~~~~~i~~fl~ 298 (357)
+...+++.+.+..||+
T Consensus 227 -D~Erd~v~e~V~~FL~ 242 (243)
T COG1647 227 -DKERDQVEEDVITFLE 242 (243)
T ss_pred -chhHHHHHHHHHHHhh
Confidence 3345679999999996
No 34
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.97 E-value=3.2e-29 Score=204.65 Aligned_cols=245 Identities=16% Similarity=0.217 Sum_probs=159.5
Q ss_pred EEEEEEcCCCCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHH
Q 018375 30 LFTCRWLPFSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVC 109 (357)
Q Consensus 30 l~~~~~~p~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~ 109 (357)
++|..+++. +++|+|||+||++.+...| ..+++.|. .||+|+++|+||+|.|..... .++++++++|+.++++.+
T Consensus 2 ~~~~~~g~~-~~~~~li~~hg~~~~~~~~-~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~~~i~~~- 76 (251)
T TIGR02427 2 LHYRLDGAA-DGAPVLVFINSLGTDLRMW-DPVLPALT-PDFRVLRYDKRGHGLSDAPEG-PYSIEDLADDVLALLDHL- 76 (251)
T ss_pred ceEEeecCC-CCCCeEEEEcCcccchhhH-HHHHHHhh-cccEEEEecCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHh-
Confidence 566666432 2568899999999887766 78888886 579999999999999975543 358899999999999988
Q ss_pred hhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHH-----HHHHHhhcccCcccCcc
Q 018375 110 AQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNI-----LTRVEEIIPKWKIVPTK 184 (357)
Q Consensus 110 ~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 184 (357)
+.++++++|||+||.+++.+|.++|++|+++|++++................+ ..........+...
T Consensus 77 -----~~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 148 (251)
T TIGR02427 77 -----GIERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTP--- 148 (251)
T ss_pred -----CCCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHccc---
Confidence 67889999999999999999999999999999998764322110000000000 00000000000000
Q ss_pred ccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCCccCChHHHHHHHHHccCCC
Q 018375 185 DVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYERASSRD 264 (357)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~ 264 (357)
.+. ................ .....+......+ ...+....+.++++|+++++|++|.++|.+..+.+.+.++ +
T Consensus 149 ~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~--~ 221 (251)
T TIGR02427 149 GFR---EAHPARLDLYRNMLVR-QPPDGYAGCCAAI-RDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVP--G 221 (251)
T ss_pred ccc---cCChHHHHHHHHHHHh-cCHHHHHHHHHHH-hcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCC--C
Confidence 000 0000000000000000 0000000000111 1123345567889999999999999999998888888874 7
Q ss_pred ceEEEcCCCCcccccCCCChhhhhHHHHHHHHHH
Q 018375 265 KTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLD 298 (357)
Q Consensus 265 ~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~ 298 (357)
.++++++++||..++++|+. +.+.|.+|++
T Consensus 222 ~~~~~~~~~gH~~~~~~p~~----~~~~i~~fl~ 251 (251)
T TIGR02427 222 ARFAEIRGAGHIPCVEQPEA----FNAALRDFLR 251 (251)
T ss_pred ceEEEECCCCCcccccChHH----HHHHHHHHhC
Confidence 89999999999999999988 8999999873
No 35
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.96 E-value=4.2e-29 Score=212.69 Aligned_cols=260 Identities=16% Similarity=0.128 Sum_probs=163.0
Q ss_pred ecCCcEEEEEEEcCC-CCCceEEEEEccCCccccc----------cHHHHH---HHHhhCCcEEEEeCCCC--CccCCCC
Q 018375 24 NARGVQLFTCRWLPF-STPKAVVFLCHGYGMECSG----------FMRECG---TRLASAGYAVFGIDYEG--HGRSRGA 87 (357)
Q Consensus 24 ~~~g~~l~~~~~~p~-~~~~p~vv~lHG~~~~~~~----------~~~~~~---~~l~~~G~~vi~~d~~G--~G~s~~~ 87 (357)
..+|.+|+|..+++. ...+++|||+||++++... ||..++ ..|...+|+|+++|+|| +|.|...
T Consensus 12 ~~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~ 91 (351)
T TIGR01392 12 VLSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPS 91 (351)
T ss_pred ccCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCC
Confidence 347889999999752 2345789999999987532 456665 35656779999999999 5665431
Q ss_pred ----C-------ccccchhhHHHHHHHHHHHHHhhhccCCcc-EEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccc
Q 018375 88 ----R-------CYIKKFENIVNDCDDFFKSVCAQEEYTDKA-RFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKIS 155 (357)
Q Consensus 88 ----~-------~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~-v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~ 155 (357)
. ...++++++++|+.++++.+ +.++ ++|+||||||.+++.+|.++|++|+++|++++.....
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 165 (351)
T TIGR01392 92 SINPGGRPYGSDFPLITIRDDVKAQKLLLDHL------GIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHS 165 (351)
T ss_pred CCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHc------CCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCC
Confidence 1 11357899999999999988 6788 9999999999999999999999999999999876433
Q ss_pred cccCChhHHHHHHHHHHhhcccCcccCcc-------cc--ch----h-hccChhHHHHHhhcc-----------------
Q 018375 156 EKVKPHPVLVNILTRVEEIIPKWKIVPTK-------DV--ID----S-AFKDSIKREEIRNNK----------------- 204 (357)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~--~~----~-~~~~~~~~~~~~~~~----------------- 204 (357)
.... .........+.. ...+...... .. .. . ...............
T Consensus 166 ~~~~--~~~~~~~~~~~~-~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 242 (351)
T TIGR01392 166 AWCI--AFNEVQRQAILA-DPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVE 242 (351)
T ss_pred HHHH--HHHHHHHHHHHh-CCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHH
Confidence 2110 000000000000 0000000000 00 00 0 000000000000000
Q ss_pred ----------cccCCccchHHHHHHHHhh------hhHhhccCCccccEEEEeeCCCccCChHHHHHHHHHccCCCceEE
Q 018375 205 ----------LIYQDKPRLKTALEMLRTS------MSLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYERASSRDKTIK 268 (357)
Q Consensus 205 ----------~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 268 (357)
........+......+... .+..+.+++|++|+|+|+|++|.++|+..++.+.+.++ +.++.
T Consensus 243 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~--~~~~~ 320 (351)
T TIGR01392 243 SYLRYQGDKFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALP--AAGLR 320 (351)
T ss_pred HHHHHHHHHHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHh--hcCCc
Confidence 0000000011111111110 12346788999999999999999999999999999996 45443
Q ss_pred -----EcCCCCcccccCCCChhhhhHHHHHHHHHH
Q 018375 269 -----LYPGMWHALTSGEPDENIDIVFGDIIAWLD 298 (357)
Q Consensus 269 -----~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~ 298 (357)
+++++||.+++++|++ +++.|.+||+
T Consensus 321 v~~~~i~~~~GH~~~le~p~~----~~~~l~~FL~ 351 (351)
T TIGR01392 321 VTYVEIESPYGHDAFLVETDQ----VEELIRGFLR 351 (351)
T ss_pred eEEEEeCCCCCcchhhcCHHH----HHHHHHHHhC
Confidence 5679999999999998 9999999974
No 36
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.96 E-value=9e-29 Score=202.47 Aligned_cols=252 Identities=19% Similarity=0.205 Sum_probs=158.0
Q ss_pred cCCcEEEEEEEcCCCCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHH
Q 018375 25 ARGVQLFTCRWLPFSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDF 104 (357)
Q Consensus 25 ~~g~~l~~~~~~p~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~ 104 (357)
.+|.+++|.. | ++.+|+|||+||++.+...| ..+...|.+.||+|+++|+||||.|........+++++++++.++
T Consensus 4 ~~~~~~~~~~--~-~~~~p~vvliHG~~~~~~~w-~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~ 79 (273)
T PLN02211 4 ENGEEVTDMK--P-NRQPPHFVLIHGISGGSWCW-YKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDF 79 (273)
T ss_pred cccccccccc--c-cCCCCeEEEECCCCCCcCcH-HHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHH
Confidence 3577777665 3 34578899999999987777 899999988899999999999998865433335889999999998
Q ss_pred HHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHHHHHhhccc----Ccc
Q 018375 105 FKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTRVEEIIPK----WKI 180 (357)
Q Consensus 105 l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 180 (357)
++.+. ..++++|+||||||.+++.++..+|++|+++|++++........ ...........+...... +..
T Consensus 80 i~~l~-----~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (273)
T PLN02211 80 LSSLP-----ENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQ-TDEDMKDGVPDLSEFGDVYELGFGL 153 (273)
T ss_pred HHhcC-----CCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCC-HHHHHhccccchhhhccceeeeecc
Confidence 88761 14799999999999999999999999999999998754311100 000000000000000000 000
Q ss_pred cCccccchhhccChhHHHHHhhcccccCCccc-hHHHHHHHH--------hhhhHhhccCCc-cccEEEEeeCCCccCCh
Q 018375 181 VPTKDVIDSAFKDSIKREEIRNNKLIYQDKPR-LKTALEMLR--------TSMSLEDSLSKV-MIPFFVLHGEADTVTDP 250 (357)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--------~~~~~~~~~~~i-~~Pvl~i~g~~D~~~~~ 250 (357)
........... ......... +...+. ......... ..........++ ++|+++|.|++|..+|+
T Consensus 154 ~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~ 227 (273)
T PLN02211 154 GPDQPPTSAII-KKEFRRKIL-----YQMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKP 227 (273)
T ss_pred CCCCCCceeee-CHHHHHHHH-----hcCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCH
Confidence 00000000000 000000000 000000 000000000 000111223344 78999999999999999
Q ss_pred HHHHHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHH
Q 018375 251 EVSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDE 299 (357)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~ 299 (357)
+.++.+.+.++ ..+++.++ +||.+++++|++ +.+.|.++...
T Consensus 228 ~~~~~m~~~~~--~~~~~~l~-~gH~p~ls~P~~----~~~~i~~~a~~ 269 (273)
T PLN02211 228 EQQEAMIKRWP--PSQVYELE-SDHSPFFSTPFL----LFGLLIKAAAS 269 (273)
T ss_pred HHHHHHHHhCC--ccEEEEEC-CCCCccccCHHH----HHHHHHHHHHH
Confidence 99999999885 56888997 899999999999 88877776543
No 37
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.96 E-value=3.5e-29 Score=201.30 Aligned_cols=217 Identities=26% Similarity=0.434 Sum_probs=150.0
Q ss_pred EEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCc-cccchhhHHHHHHHHHHHHHhhhccCCccEEEEE
Q 018375 45 VFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARC-YIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYG 123 (357)
Q Consensus 45 vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~-~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG 123 (357)
|||+||++++...| ..+++.|+ +||+|+++|+||+|.|..... ..++++++++|+.++++.+ +.++++++|
T Consensus 1 vv~~hG~~~~~~~~-~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~------~~~~~~lvG 72 (228)
T PF12697_consen 1 VVFLHGFGGSSESW-DPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDAL------GIKKVILVG 72 (228)
T ss_dssp EEEE-STTTTGGGG-HHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHT------TTSSEEEEE
T ss_pred eEEECCCCCCHHHH-HHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccc------ccccccccc
Confidence 79999999998777 88999995 789999999999999987653 3458899999999999998 668999999
Q ss_pred eChhHHHHHHHHhcCCCcccEEEEecccccccccc--C-ChhHHHHHHHHHHhhcccCcccCccccchhhccChhHHHHH
Q 018375 124 ESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKV--K-PHPVLVNILTRVEEIIPKWKIVPTKDVIDSAFKDSIKREEI 200 (357)
Q Consensus 124 ~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (357)
||+||.+++.++.++|++|+++|+++|........ . .......+............ .................
T Consensus 73 ~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 148 (228)
T PF12697_consen 73 HSMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLA----SRFFYRWFDGDEPEDLI 148 (228)
T ss_dssp ETHHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHTHHHHHHHH
T ss_pred cccccccccccccccccccccceeecccccccccccccccchhhhhhhhcccccccccc----ccccccccccccccccc
Confidence 99999999999999999999999999987543211 0 01111111111000000000 00000011111111111
Q ss_pred hhcccccCCccchHHHHHHHH---hhhhHhhccCCccccEEEEeeCCCccCChHHHHHHHHHccCCCceEEEcCCCCccc
Q 018375 201 RNNKLIYQDKPRLKTALEMLR---TSMSLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYERASSRDKTIKLYPGMWHAL 277 (357)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 277 (357)
.. .......... ...+....++++++|+++++|++|.+++.+..+.+.+.++ ++++++++++||++
T Consensus 149 ~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~ 217 (228)
T PF12697_consen 149 RS---------SRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLP--NAELVVIPGAGHFL 217 (228)
T ss_dssp HH---------HHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHST--TEEEEEETTSSSTH
T ss_pred cc---------cccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCC--CCEEEEECCCCCcc
Confidence 00 1111111111 2234456677889999999999999999889999888884 89999999999999
Q ss_pred ccCCCCh
Q 018375 278 TSGEPDE 284 (357)
Q Consensus 278 ~~~~p~~ 284 (357)
++++|++
T Consensus 218 ~~~~p~~ 224 (228)
T PF12697_consen 218 FLEQPDE 224 (228)
T ss_dssp HHHSHHH
T ss_pred HHHCHHH
Confidence 9999987
No 38
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.96 E-value=1.3e-28 Score=200.28 Aligned_cols=231 Identities=21% Similarity=0.316 Sum_probs=146.7
Q ss_pred ceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEEE
Q 018375 42 KAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFL 121 (357)
Q Consensus 42 ~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l 121 (357)
+|+|||+||++++...| ..+++.|.+ +|+|+++|+||+|.|..... .+++++++++.+. ..+++++
T Consensus 4 ~~~iv~~HG~~~~~~~~-~~~~~~l~~-~~~vi~~d~~G~G~s~~~~~--~~~~~~~~~~~~~----------~~~~~~l 69 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVF-RCLDEELSA-HFTLHLVDLPGHGRSRGFGP--LSLADAAEAIAAQ----------APDPAIW 69 (245)
T ss_pred CceEEEEcCCCCchhhH-HHHHHhhcc-CeEEEEecCCcCccCCCCCC--cCHHHHHHHHHHh----------CCCCeEE
Confidence 47899999999987777 888899975 59999999999999875432 3566665554432 2468999
Q ss_pred EEeChhHHHHHHHHhcCCCcccEEEEecccccccccc-CC----hhHHHHHHHHHHhhcccCcccCccccch-hhccC--
Q 018375 122 YGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKV-KP----HPVLVNILTRVEEIIPKWKIVPTKDVID-SAFKD-- 193 (357)
Q Consensus 122 vG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-- 193 (357)
+||||||.+++.++.++|++++++|++++........ .. ......+...+...... ....+.. ..+..
T Consensus 70 vG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 145 (245)
T TIGR01738 70 LGWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQR----TIERFLALQTLGTPT 145 (245)
T ss_pred EEEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHH----HHHHHHHHHHhcCCc
Confidence 9999999999999999999999999998765432111 00 01111111000000000 0000000 00000
Q ss_pred -hhHHHHHhhcccccCC--ccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCCccCChHHHHHHHHHccCCCceEEEc
Q 018375 194 -SIKREEIRNNKLIYQD--KPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYERASSRDKTIKLY 270 (357)
Q Consensus 194 -~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (357)
................ ...+......+ ...+....+.++++|+++++|++|.+++.+..+.+.+.++ +++++++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~--~~~~~~~ 222 (245)
T TIGR01738 146 ARQDARALKQTLLARPTPNVQVLQAGLEIL-ATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAP--HSELYIF 222 (245)
T ss_pred cchHHHHHHHHhhccCCCCHHHHHHHHHHh-hcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCC--CCeEEEe
Confidence 0000000000000000 01111111111 1123445678899999999999999999999888888874 8999999
Q ss_pred CCCCcccccCCCChhhhhHHHHHHHHH
Q 018375 271 PGMWHALTSGEPDENIDIVFGDIIAWL 297 (357)
Q Consensus 271 ~~~gH~~~~~~p~~~~~~~~~~i~~fl 297 (357)
+++||++++++|++ +++.|.+|+
T Consensus 223 ~~~gH~~~~e~p~~----~~~~i~~fi 245 (245)
T TIGR01738 223 AKAAHAPFLSHAEA----FCALLVAFK 245 (245)
T ss_pred CCCCCCccccCHHH----HHHHHHhhC
Confidence 99999999999998 999999885
No 39
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.96 E-value=2.1e-28 Score=209.68 Aligned_cols=264 Identities=16% Similarity=0.151 Sum_probs=164.4
Q ss_pred CCcEEEEEEEcCC-CCCceEEEEEccCCccccc------------cHHHHHH---HHhhCCcEEEEeCCCCC-ccCCCCC
Q 018375 26 RGVQLFTCRWLPF-STPKAVVFLCHGYGMECSG------------FMRECGT---RLASAGYAVFGIDYEGH-GRSRGAR 88 (357)
Q Consensus 26 ~g~~l~~~~~~p~-~~~~p~vv~lHG~~~~~~~------------~~~~~~~---~l~~~G~~vi~~d~~G~-G~s~~~~ 88 (357)
+|.+|+|..++.. ...+|+|||+||++++... ||..++. .|...+|+|+++|++|+ |.|+.+.
T Consensus 31 ~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~ 110 (379)
T PRK00175 31 PPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPS 110 (379)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCC
Confidence 5678899998742 2346889999999998764 3466542 34345799999999983 4443221
Q ss_pred c-------------cccchhhHHHHHHHHHHHHHhhhccCCcc-EEEEEeChhHHHHHHHHhcCCCcccEEEEecccccc
Q 018375 89 C-------------YIKKFENIVNDCDDFFKSVCAQEEYTDKA-RFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKI 154 (357)
Q Consensus 89 ~-------------~~~~~~~~~~d~~~~l~~l~~~~~~~~~~-v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 154 (357)
. ..++++++++|+.++++.+ +.++ ++++||||||.+++.+|.++|++|+++|++++....
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l------~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 184 (379)
T PRK00175 111 SINPDTGKPYGSDFPVITIRDWVRAQARLLDAL------GITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARL 184 (379)
T ss_pred CCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHh------CCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCccc
Confidence 0 1358999999999999998 7788 589999999999999999999999999999986543
Q ss_pred ccccCChhHHHHHHHHHHhhcccCcc--------cCc----------------cccchhhccC--------------hhH
Q 018375 155 SEKVKPHPVLVNILTRVEEIIPKWKI--------VPT----------------KDVIDSAFKD--------------SIK 196 (357)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~----------------~~~~~~~~~~--------------~~~ 196 (357)
..... .+.......+.. .+.|.. ... .......+.. ...
T Consensus 185 ~~~~~--~~~~~~~~~i~~-~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~ 261 (379)
T PRK00175 185 SAQNI--AFNEVARQAILA-DPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQV 261 (379)
T ss_pred CHHHH--HHHHHHHHHHHh-CCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchH
Confidence 22100 000000000000 000000 000 0000000000 000
Q ss_pred HHHHh---hcccccCCccchHHHHHHHHhh-------hhHhhccCCccccEEEEeeCCCccCChHHHHHHHHHccCC--C
Q 018375 197 REEIR---NNKLIYQDKPRLKTALEMLRTS-------MSLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYERASSR--D 264 (357)
Q Consensus 197 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~--~ 264 (357)
..... ...........+......+... .+..+.+.+|++|+|+|+|++|.++|++.++.+.+.++.. .
T Consensus 262 ~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~ 341 (379)
T PRK00175 262 ESYLRYQGDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGAD 341 (379)
T ss_pred HHHHHHHHHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCC
Confidence 00000 0000000000111111111111 1245678899999999999999999999999999999631 2
Q ss_pred ceEEEcC-CCCcccccCCCChhhhhHHHHHHHHHHHhcc
Q 018375 265 KTIKLYP-GMWHALTSGEPDENIDIVFGDIIAWLDERMS 302 (357)
Q Consensus 265 ~~~~~~~-~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~~ 302 (357)
+++++++ ++||.+++++|++ +++.|.+||.+...
T Consensus 342 ~~l~~i~~~~GH~~~le~p~~----~~~~L~~FL~~~~~ 376 (379)
T PRK00175 342 VSYAEIDSPYGHDAFLLDDPR----YGRLVRAFLERAAR 376 (379)
T ss_pred eEEEEeCCCCCchhHhcCHHH----HHHHHHHHHHhhhh
Confidence 3777775 9999999999998 99999999987543
No 40
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.96 E-value=2.6e-27 Score=203.63 Aligned_cols=261 Identities=20% Similarity=0.194 Sum_probs=154.1
Q ss_pred EEEEEEEcCCCCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchh----hHHHHHHHH
Q 018375 29 QLFTCRWLPFSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFE----NIVNDCDDF 104 (357)
Q Consensus 29 ~l~~~~~~p~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~----~~~~d~~~~ 104 (357)
.+.+..+. ..+.+|+|||+||++++...| ...+..|++. |+|+++|+||+|.|+.+.....+.+ .+++++.++
T Consensus 93 ~~~~~~~~-~~~~~p~vvllHG~~~~~~~~-~~~~~~L~~~-~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~ 169 (402)
T PLN02894 93 FINTVTFD-SKEDAPTLVMVHGYGASQGFF-FRNFDALASR-FRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEW 169 (402)
T ss_pred eEEEEEec-CCCCCCEEEEECCCCcchhHH-HHHHHHHHhC-CEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHH
Confidence 66655553 345678999999999887666 5666888765 9999999999999976542211222 234455555
Q ss_pred HHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChh-H-------HHHHHHHH--Hhh
Q 018375 105 FKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHP-V-------LVNILTRV--EEI 174 (357)
Q Consensus 105 l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~-~-------~~~~~~~~--~~~ 174 (357)
++.+ +..+++|+||||||.+++.+|.++|++|+++|+++|............ . ...+...+ ...
T Consensus 170 ~~~l------~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (402)
T PLN02894 170 RKAK------NLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNF 243 (402)
T ss_pred HHHc------CCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCC
Confidence 5544 567999999999999999999999999999999998654322111000 0 00000000 000
Q ss_pred cccCccc---C-ccccchhh----ccC--------hhHHHHHhhc-ccccCCccchHHHHHHH-----HhhhhHhhccCC
Q 018375 175 IPKWKIV---P-TKDVIDSA----FKD--------SIKREEIRNN-KLIYQDKPRLKTALEML-----RTSMSLEDSLSK 232 (357)
Q Consensus 175 ~~~~~~~---~-~~~~~~~~----~~~--------~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 232 (357)
.+..... + ...+.... +.. .......... ................. ....+....+.+
T Consensus 244 ~p~~~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 323 (402)
T PLN02894 244 TPQKIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASE 323 (402)
T ss_pred CHHHHHHhccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhccc
Confidence 0000000 0 00000000 000 0000000000 00000000000000111 112344556788
Q ss_pred ccccEEEEeeCCCccCChHHHHHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHHhcccc
Q 018375 233 VMIPFFVLHGEADTVTDPEVSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDERMSDA 304 (357)
Q Consensus 233 i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~~~~ 304 (357)
+++|+++|+|++|.+.+ .....+.+... ..+++++++++||++++|+|+. |++.|.+|++..+...
T Consensus 324 I~vP~liI~G~~D~i~~-~~~~~~~~~~~-~~~~~~~i~~aGH~~~~E~P~~----f~~~l~~~~~~~~~~~ 389 (402)
T PLN02894 324 WKVPTTFIYGRHDWMNY-EGAVEARKRMK-VPCEIIRVPQGGHFVFLDNPSG----FHSAVLYACRKYLSPD 389 (402)
T ss_pred CCCCEEEEEeCCCCCCc-HHHHHHHHHcC-CCCcEEEeCCCCCeeeccCHHH----HHHHHHHHHHHhccCC
Confidence 99999999999998765 55555666553 3689999999999999999999 8999999988877663
No 41
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.96 E-value=3.4e-28 Score=201.29 Aligned_cols=271 Identities=24% Similarity=0.308 Sum_probs=169.5
Q ss_pred eeeeEEecCCc-EEEEEEEcCC-------CCCceEEEEEccCCccccccHHHHHHHHhhC-CcEEEEeCCCCCc-cCCCC
Q 018375 18 QEEYIRNARGV-QLFTCRWLPF-------STPKAVVFLCHGYGMECSGFMRECGTRLASA-GYAVFGIDYEGHG-RSRGA 87 (357)
Q Consensus 18 ~~~~~~~~~g~-~l~~~~~~p~-------~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~-G~~vi~~d~~G~G-~s~~~ 87 (357)
....+....|. .+...++... +..+++||++|||+++...| +.....|.+. |+.|+++|++|+| .|..+
T Consensus 26 ~~~~i~~~~g~~~~~~~w~~~~~~~~~~~~~~~~pvlllHGF~~~~~~w-~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~ 104 (326)
T KOG1454|consen 26 RSTSIEIPWGPLTIRSKWIPNLDKYGSPGDKDKPPVLLLHGFGASSFSW-RRVVPLLSKAKGLRVLAIDLPGHGYSSPLP 104 (326)
T ss_pred cceEEEcccCCceeEEEEeccceeccCCCCCCCCcEEEeccccCCcccH-hhhccccccccceEEEEEecCCCCcCCCCC
Confidence 34444444453 5555544322 13688999999999987777 7888888766 5999999999999 55555
Q ss_pred CccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEE---EeccccccccccCC--hh
Q 018375 88 RCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAV---LVAPMCKISEKVKP--HP 162 (357)
Q Consensus 88 ~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~v---l~~~~~~~~~~~~~--~~ 162 (357)
.+..++..++++-+..+.... ...+++++|||+||.+|+.+|+.+|+.|++++ ++++.....+.... ..
T Consensus 105 ~~~~y~~~~~v~~i~~~~~~~------~~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~ 178 (326)
T KOG1454|consen 105 RGPLYTLRELVELIRRFVKEV------FVEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRR 178 (326)
T ss_pred CCCceehhHHHHHHHHHHHhh------cCcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHH
Confidence 555678888888888888777 67789999999999999999999999999999 55554443322110 11
Q ss_pred HHHHHHHHHHhhcccCcccCccccchhhc-------cC-hhHHHH---Hhhcc--cccCCccchHHHHHHHHhhhhHhhc
Q 018375 163 VLVNILTRVEEIIPKWKIVPTKDVIDSAF-------KD-SIKREE---IRNNK--LIYQDKPRLKTALEMLRTSMSLEDS 229 (357)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~-~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (357)
....+........+.........+..... .+ ...... ..... .........................
T Consensus 179 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (326)
T KOG1454|consen 179 LLDKFLSALELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSL 258 (326)
T ss_pred hhhhhccHhhhcCccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHh
Confidence 11111111111111111111000000000 00 000000 00000 0000000000000000001223345
Q ss_pred cCCcc-ccEEEEeeCCCccCChHHHHHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHHhc
Q 018375 230 LSKVM-IPFFVLHGEADTVTDPEVSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDERM 301 (357)
Q Consensus 230 ~~~i~-~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~ 301 (357)
+.++. +|+|+++|++|.++|.+.+..+.+.+ +++++++++++||.+++|.|++ +++.|..|+..+.
T Consensus 259 ~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~--pn~~~~~I~~~gH~~h~e~Pe~----~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 259 IKKIWKCPVLIIWGDKDQIVPLELAEELKKKL--PNAELVEIPGAGHLPHLERPEE----VAALLRSFIARLR 325 (326)
T ss_pred hccccCCceEEEEcCcCCccCHHHHHHHHhhC--CCceEEEeCCCCcccccCCHHH----HHHHHHHHHHHhc
Confidence 56676 99999999999999999999999988 5999999999999999999999 9999999998753
No 42
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.96 E-value=6.8e-27 Score=200.94 Aligned_cols=242 Identities=16% Similarity=0.164 Sum_probs=161.4
Q ss_pred cceeeeeEEecCCcEEEEEEEcCC-CCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccc
Q 018375 15 VEYQEEYIRNARGVQLFTCRWLPF-STPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKK 93 (357)
Q Consensus 15 ~~~~~~~~~~~~g~~l~~~~~~p~-~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~ 93 (357)
..+++..+...+|.+|.++.+.|. +++.|+||++||+.+....++..+++.|+++||.|+++|+||+|.|...... .+
T Consensus 166 ~~~e~v~i~~~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~-~d 244 (414)
T PRK05077 166 GELKELEFPIPGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLT-QD 244 (414)
T ss_pred CceEEEEEEcCCCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCcc-cc
Confidence 357778888888889999999884 4567888888787765444447788999999999999999999999653211 12
Q ss_pred hhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHH----HHH
Q 018375 94 FENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVN----ILT 169 (357)
Q Consensus 94 ~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~----~~~ 169 (357)
.. .....+++++.....++..+++++|||+||++|+.+|..+|++|+++|+++|+....... ...... ...
T Consensus 245 ~~---~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~--~~~~~~~p~~~~~ 319 (414)
T PRK05077 245 SS---LLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTD--PKRQQQVPEMYLD 319 (414)
T ss_pred HH---HHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcc--hhhhhhchHHHHH
Confidence 22 223456677755555567899999999999999999999999999999999876421100 000000 000
Q ss_pred HHHhhcccCcccCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhc-cCCccccEEEEeeCCCccC
Q 018375 170 RVEEIIPKWKIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDS-LSKVMIPFFVLHGEADTVT 248 (357)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~Pvl~i~g~~D~~~ 248 (357)
.+...+.. . . .....+...+..+. ...... ..++++|+|+|+|++|.++
T Consensus 320 ~la~~lg~---~-----------~--------------~~~~~l~~~l~~~s--l~~~~~l~~~i~~PvLiI~G~~D~iv 369 (414)
T PRK05077 320 VLASRLGM---H-----------D--------------ASDEALRVELNRYS--LKVQGLLGRRCPTPMLSGYWKNDPFS 369 (414)
T ss_pred HHHHHhCC---C-----------C--------------CChHHHHHHhhhcc--chhhhhhccCCCCcEEEEecCCCCCC
Confidence 00000000 0 0 00000000000000 000111 1578999999999999999
Q ss_pred ChHHHHHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHHhc
Q 018375 249 DPEVSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDERM 301 (357)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~ 301 (357)
|.+.++.+.+.. ++.+++++|++ ++.+.++. +++.|.+||.+++
T Consensus 370 P~~~a~~l~~~~--~~~~l~~i~~~---~~~e~~~~----~~~~i~~wL~~~l 413 (414)
T PRK05077 370 PEEDSRLIASSS--ADGKLLEIPFK---PVYRNFDK----ALQEISDWLEDRL 413 (414)
T ss_pred CHHHHHHHHHhC--CCCeEEEccCC---CccCCHHH----HHHHHHHHHHHHh
Confidence 999999888777 48999999986 33356666 9999999998875
No 43
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.96 E-value=9.9e-28 Score=195.72 Aligned_cols=239 Identities=21% Similarity=0.298 Sum_probs=149.0
Q ss_pred ceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCc-cccchhhHHHH-HHHHHHHHHhhhccCCccE
Q 018375 42 KAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARC-YIKKFENIVND-CDDFFKSVCAQEEYTDKAR 119 (357)
Q Consensus 42 ~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~-~~~~~~~~~~d-~~~~l~~l~~~~~~~~~~v 119 (357)
+|+||++||++++...| ..++..|+ .||.|+++|+||+|.|+.+.. ...++++.+++ +..+++.+ +.+++
T Consensus 1 ~~~vv~~hG~~~~~~~~-~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 72 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADW-QALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQL------GIEPF 72 (251)
T ss_pred CCEEEEEcCCCCchhhH-HHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHc------CCCeE
Confidence 36799999999987777 89999998 789999999999999976543 33477777877 66666665 67899
Q ss_pred EEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHH---HHHHHHHh-----hcccCcccCccccchhhc
Q 018375 120 FLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLV---NILTRVEE-----IIPKWKIVPTKDVIDSAF 191 (357)
Q Consensus 120 ~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~---~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 191 (357)
+++|||+||.+++.+|.++|+.|++++++++............... .....+.. ....+.... .+.....
T Consensus 73 ~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 150 (251)
T TIGR03695 73 FLVGYSMGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQP--LFASQKN 150 (251)
T ss_pred EEEEeccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCc--eeeeccc
Confidence 9999999999999999999999999999988654332111000000 00000000 000000000 0000000
Q ss_pred cChhHHHHHhhcccccCCccchHHHHHHHH--hhhhHhhccCCccccEEEEeeCCCccCChHHHHHHHHHccCCCceEEE
Q 018375 192 KDSIKREEIRNNKLIYQDKPRLKTALEMLR--TSMSLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYERASSRDKTIKL 269 (357)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 269 (357)
............... .............. ...+....+.++++|+++++|++|..++ ...+.+.+.. +++++++
T Consensus 151 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~--~~~~~~~ 226 (251)
T TIGR03695 151 LPPEQRQALRAKRLA-NNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLL--PNLTLVI 226 (251)
T ss_pred CChHHhHHHHHhccc-ccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcC--CCCcEEE
Confidence 000111001100000 00011111111110 1122334567889999999999998764 4555566555 4799999
Q ss_pred cCCCCcccccCCCChhhhhHHHHHHHHHH
Q 018375 270 YPGMWHALTSGEPDENIDIVFGDIIAWLD 298 (357)
Q Consensus 270 ~~~~gH~~~~~~p~~~~~~~~~~i~~fl~ 298 (357)
++++||++++++|+. +.+.|.+|++
T Consensus 227 ~~~~gH~~~~e~~~~----~~~~i~~~l~ 251 (251)
T TIGR03695 227 IANAGHNIHLENPEA----FAKILLAFLE 251 (251)
T ss_pred EcCCCCCcCccChHH----HHHHHHHHhC
Confidence 999999999999988 9999999983
No 44
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.95 E-value=8.8e-27 Score=194.86 Aligned_cols=263 Identities=17% Similarity=0.204 Sum_probs=159.4
Q ss_pred eeeEEecCCcEEEEEEEcCCCCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCc-cccchhhH
Q 018375 19 EEYIRNARGVQLFTCRWLPFSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARC-YIKKFENI 97 (357)
Q Consensus 19 ~~~~~~~~g~~l~~~~~~p~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~-~~~~~~~~ 97 (357)
+.++...||.+|+|..+++ .+.++|||+||++++... ..+...+...+|+|+++|+||||.|..... ..++.+++
T Consensus 6 ~~~~~~~~~~~l~y~~~g~--~~~~~lvllHG~~~~~~~--~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 81 (306)
T TIGR01249 6 SGYLNVSDNHQLYYEQSGN--PDGKPVVFLHGGPGSGTD--PGCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDL 81 (306)
T ss_pred CCeEEcCCCcEEEEEECcC--CCCCEEEEECCCCCCCCC--HHHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHH
Confidence 3567777899999988743 234679999998776443 244455555689999999999999986543 23467788
Q ss_pred HHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccC------ChhHHHHHHHHH
Q 018375 98 VNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVK------PHPVLVNILTRV 171 (357)
Q Consensus 98 ~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~------~~~~~~~~~~~~ 171 (357)
++|+..+++++ +.++++++||||||.+++.++.++|++|+++|++++......... ...........+
T Consensus 82 ~~dl~~l~~~l------~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (306)
T TIGR01249 82 VADIEKLREKL------GIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREKEWSWFYEGGASMIYPDAWQRF 155 (306)
T ss_pred HHHHHHHHHHc------CCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHHHHHHHHhcchhhhCHHHHHHH
Confidence 89998888887 678899999999999999999999999999999987654221100 000000000001
Q ss_pred HhhcccCcc--cCccccchhhccChh-HH----HH---Hhh-cccc-----cCC--ccchHHHHHHH----Hh-------
Q 018375 172 EEIIPKWKI--VPTKDVIDSAFKDSI-KR----EE---IRN-NKLI-----YQD--KPRLKTALEML----RT------- 222 (357)
Q Consensus 172 ~~~~~~~~~--~~~~~~~~~~~~~~~-~~----~~---~~~-~~~~-----~~~--~~~~~~~~~~~----~~------- 222 (357)
....+.... .....+....+.... .. .. +.. .... +.. .+.+......+ ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (306)
T TIGR01249 156 MDSIPENERNEQLVNAYHDRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHYFVNKGFLDV 235 (306)
T ss_pred hhhCChhhhhccHHHHHHHHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhHHHHhchhcC
Confidence 100000000 000001111111110 00 00 000 0000 000 00011111110 00
Q ss_pred hhhHhhccCCc-cccEEEEeeCCCccCChHHHHHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHHh
Q 018375 223 SMSLEDSLSKV-MIPFFVLHGEADTVTDPEVSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDER 300 (357)
Q Consensus 223 ~~~~~~~~~~i-~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~ 300 (357)
.......+.++ ++|+|+++|++|.++|.+.++.+.+.++ +.++++++++||.++. ++ ..+.|.+|+.+.
T Consensus 236 ~~~~~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~~--~~~~~~~~~~gH~~~~---~~----~~~~i~~~~~~~ 305 (306)
T TIGR01249 236 ENFILDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAFP--EAELKVTNNAGHSAFD---PN----NLAALVHALETY 305 (306)
T ss_pred chHHHHhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhCC--CCEEEEECCCCCCCCC---hH----HHHHHHHHHHHh
Confidence 11133456667 6999999999999999999999999884 7999999999999862 33 566677776543
No 45
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.95 E-value=2e-27 Score=205.19 Aligned_cols=242 Identities=22% Similarity=0.280 Sum_probs=157.8
Q ss_pred cCCcEEEEEEEcCCCCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHH
Q 018375 25 ARGVQLFTCRWLPFSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDF 104 (357)
Q Consensus 25 ~~g~~l~~~~~~p~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~ 104 (357)
.++.+++|..+++ +..++|||+||++++...| ..+...|.+. |+|+++|+||||.|...... .+++++++++..+
T Consensus 116 ~~~~~i~~~~~g~--~~~~~vl~~HG~~~~~~~~-~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~-~~~~~~~~~~~~~ 190 (371)
T PRK14875 116 IGGRTVRYLRLGE--GDGTPVVLIHGFGGDLNNW-LFNHAALAAG-RPVIALDLPGHGASSKAVGA-GSLDELAAAVLAF 190 (371)
T ss_pred EcCcEEEEecccC--CCCCeEEEECCCCCccchH-HHHHHHHhcC-CEEEEEcCCCCCCCCCCCCC-CCHHHHHHHHHHH
Confidence 3567787776543 3467899999999988777 6788888765 99999999999999654332 4788999999998
Q ss_pred HHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHH---------HHHHHhhc
Q 018375 105 FKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNI---------LTRVEEII 175 (357)
Q Consensus 105 l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~ 175 (357)
++.+ +..+++++|||+||.+++.+|..+|+++.++|+++|........ ..+...+ ...+....
T Consensus 191 ~~~~------~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 262 (371)
T PRK14875 191 LDAL------GIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEIN--GDYIDGFVAAESRRELKPVLELLF 262 (371)
T ss_pred HHhc------CCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccc--hhHHHHhhcccchhHHHHHHHHHh
Confidence 8887 67889999999999999999999999999999998864322111 0000000 00000000
Q ss_pred ccCcccCccccchhhccChhHHHHHhhcccccCCccchHHHHHHH----HhhhhHhhccCCccccEEEEeeCCCccCChH
Q 018375 176 PKWKIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEML----RTSMSLEDSLSKVMIPFFVLHGEADTVTDPE 251 (357)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~ 251 (357)
.... .. ....................+....... ....+....+.++++|+|+++|++|.++|+.
T Consensus 263 ~~~~-----~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~ 331 (371)
T PRK14875 263 ADPA-----LV------TRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAA 331 (371)
T ss_pred cChh-----hC------CHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHH
Confidence 0000 00 0000000000000000000000000000 0012333456778999999999999999987
Q ss_pred HHHHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHH
Q 018375 252 VSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDE 299 (357)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~ 299 (357)
.++.+ . .++++.+++++||++++++|+. +.+.|.+||++
T Consensus 332 ~~~~l----~-~~~~~~~~~~~gH~~~~e~p~~----~~~~i~~fl~~ 370 (371)
T PRK14875 332 HAQGL----P-DGVAVHVLPGAGHMPQMEAAAD----VNRLLAEFLGK 370 (371)
T ss_pred HHhhc----c-CCCeEEEeCCCCCChhhhCHHH----HHHHHHHHhcc
Confidence 65543 2 3689999999999999999988 99999999965
No 46
>PRK10985 putative hydrolase; Provisional
Probab=99.95 E-value=2.5e-25 Score=187.09 Aligned_cols=277 Identities=14% Similarity=0.070 Sum_probs=165.4
Q ss_pred cceeeeeEEecCCcEEEEEEEc-C-CCCCceEEEEEccCCccccc-cHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccc
Q 018375 15 VEYQEEYIRNARGVQLFTCRWL-P-FSTPKAVVFLCHGYGMECSG-FMRECGTRLASAGYAVFGIDYEGHGRSRGARCYI 91 (357)
Q Consensus 15 ~~~~~~~~~~~~g~~l~~~~~~-p-~~~~~p~vv~lHG~~~~~~~-~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~ 91 (357)
+..+...+...||..+.+.+.. | ...++|+||++||++++... |...++..|.++||+|+++|+||+|.+.......
T Consensus 29 ~~~~~~~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~ 108 (324)
T PRK10985 29 FTPYWQRLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRI 108 (324)
T ss_pred CCcceeEEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcce
Confidence 3445566778899887665432 2 22357899999999876443 5567889999999999999999999775432221
Q ss_pred cchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCc--ccEEEEeccccccccccC---C--hhHH
Q 018375 92 KKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSF--WNGAVLVAPMCKISEKVK---P--HPVL 164 (357)
Q Consensus 92 ~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~--v~~~vl~~~~~~~~~~~~---~--~~~~ 164 (357)
+. ....+|+..+++++.++. +..+++++||||||.+++.+++.+++. +.++|+++++........ . ....
T Consensus 109 ~~-~~~~~D~~~~i~~l~~~~--~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~~~~ 185 (324)
T PRK10985 109 YH-SGETEDARFFLRWLQREF--GHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFSRVY 185 (324)
T ss_pred EC-CCchHHHHHHHHHHHHhC--CCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHHHHH
Confidence 22 234678888888885532 467899999999999988888776543 899999998765432110 0 0001
Q ss_pred HH-HHHHHHh----hcccCcccCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEEE
Q 018375 165 VN-ILTRVEE----IIPKWKIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFV 239 (357)
Q Consensus 165 ~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~ 239 (357)
.. +...+.. ....+..... .-...................... .+....+.+.. .+....+.++++|+++
T Consensus 186 ~~~l~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~fd~~~~~~~~---g~~~~~~~y~~-~~~~~~l~~i~~P~li 260 (324)
T PRK10985 186 QRYLLNLLKANAARKLAAYPGTLP-INLAQLKSVRRLREFDDLITARIH---GFADAIDYYRQ-CSALPLLNQIRKPTLI 260 (324)
T ss_pred HHHHHHHHHHHHHHHHHhcccccc-CCHHHHhcCCcHHHHhhhheeccC---CCCCHHHHHHH-CChHHHHhCCCCCEEE
Confidence 11 0111111 0111100000 000000000001111000001111 11122222222 2344667899999999
Q ss_pred EeeCCCccCChHHHHHHHHHccCCCceEEEcCCCCcccccCCCC-hhhhhHHHHHHHHHHHhc
Q 018375 240 LHGEADTVTDPEVSKALYERASSRDKTIKLYPGMWHALTSGEPD-ENIDIVFGDIIAWLDERM 301 (357)
Q Consensus 240 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~-~~~~~~~~~i~~fl~~~~ 301 (357)
|+|++|++++++....+.+.. +++++++++++||+.+++..- ....-+-+.+.+|+....
T Consensus 261 i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~~ 321 (324)
T PRK10985 261 IHAKDDPFMTHEVIPKPESLP--PNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTYL 321 (324)
T ss_pred EecCCCCCCChhhChHHHHhC--CCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHhh
Confidence 999999999988777765544 478999999999999987531 011236677888886654
No 47
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.94 E-value=2.4e-25 Score=182.59 Aligned_cols=249 Identities=16% Similarity=0.171 Sum_probs=154.7
Q ss_pred ecCCcEEEEEEEcCCCCCceEEEEEccCCcccc---ccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHH
Q 018375 24 NARGVQLFTCRWLPFSTPKAVVFLCHGYGMECS---GFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVND 100 (357)
Q Consensus 24 ~~~g~~l~~~~~~p~~~~~p~vv~lHG~~~~~~---~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d 100 (357)
..+|.+|...++.|.+..++.||++||++.... ..+..+++.|+++||.|+++|+||||.|.+.. .+++++.+|
T Consensus 8 ~~~~~~l~g~~~~p~~~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~---~~~~~~~~d 84 (274)
T TIGR03100 8 SCEGETLVGVLHIPGASHTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN---LGFEGIDAD 84 (274)
T ss_pred EcCCcEEEEEEEcCCCCCCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC---CCHHHHHHH
Confidence 457888999999886545667888887653221 11367889999999999999999999987542 367788899
Q ss_pred HHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHH-HHHHHhhcccCc
Q 018375 101 CDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNI-LTRVEEIIPKWK 179 (357)
Q Consensus 101 ~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 179 (357)
+.++++++.+... +.++++++|||+||.+++.++.. +.+|+++|+++|........... ....+ ...... .
T Consensus 85 ~~~~~~~l~~~~~-g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~~~-~~~~~~~~~~~~---~-- 156 (274)
T TIGR03100 85 IAAAIDAFREAAP-HLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQAAS-RIRHYYLGQLLS---A-- 156 (274)
T ss_pred HHHHHHHHHhhCC-CCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccchHH-HHHHHHHHHHhC---h--
Confidence 9999999965321 34679999999999999999765 45799999999875433211111 11111 100000 0
Q ss_pred ccCccccchhhccChhH----HHHHhh----cccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCCccCChH
Q 018375 180 IVPTKDVIDSAFKDSIK----REEIRN----NKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDPE 251 (357)
Q Consensus 180 ~~~~~~~~~~~~~~~~~----~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~ 251 (357)
............ ...+.. .... ........ ...+....+.++++|+|+++|..|...+.-
T Consensus 157 -----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~l~~~~~P~ll~~g~~D~~~~~~ 224 (274)
T TIGR03100 157 -----DFWRKLLSGEVNLGSSLRGLGDALLKARQK-GDEVAHGG------LAERMKAGLERFQGPVLFILSGNDLTAQEF 224 (274)
T ss_pred -----HHHHHhcCCCccHHHHHHHHHHHHHhhhhc-CCCcccch------HHHHHHHHHHhcCCcEEEEEcCcchhHHHH
Confidence 000000000000 000000 0000 00000000 123344556677999999999999886422
Q ss_pred H-----HHHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHH
Q 018375 252 V-----SKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLD 298 (357)
Q Consensus 252 ~-----~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~ 298 (357)
. .....+.+..++++++.+++++|++..+.. .+++.+.|.+||+
T Consensus 225 ~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e~~---~~~v~~~i~~wL~ 273 (274)
T TIGR03100 225 ADSVLGEPAWRGALEDPGIERVEIDGADHTFSDRVW---REWVAARTTEWLR 273 (274)
T ss_pred HHHhccChhhHHHhhcCCeEEEecCCCCcccccHHH---HHHHHHHHHHHHh
Confidence 1 134444454468999999999998754332 3459999999995
No 48
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.94 E-value=1.2e-25 Score=165.17 Aligned_cols=237 Identities=19% Similarity=0.270 Sum_probs=180.4
Q ss_pred CCCccceeeeeEEecCCcEEEEEEEcCCCCCceEEEEEccCCccccccHHHHHHHH-hhCCcEEEEeCCCCCccCCCCCc
Q 018375 11 NKTVVEYQEEYIRNARGVQLFTCRWLPFSTPKAVVFLCHGYGMECSGFMRECGTRL-ASAGYAVFGIDYEGHGRSRGARC 89 (357)
Q Consensus 11 ~~~~~~~~~~~~~~~~g~~l~~~~~~p~~~~~p~vv~lHG~~~~~~~~~~~~~~~l-~~~G~~vi~~d~~G~G~s~~~~~ 89 (357)
...+++++...+.+.|.++|..++.. ...+.|+++++|+..++.... -.++..+ ..-+.+|+.+++||+|.|.+.+
T Consensus 48 ~~~n~pye~i~l~T~D~vtL~a~~~~-~E~S~pTlLyfh~NAGNmGhr-~~i~~~fy~~l~mnv~ivsYRGYG~S~Gsp- 124 (300)
T KOG4391|consen 48 KEFNMPYERIELRTRDKVTLDAYLML-SESSRPTLLYFHANAGNMGHR-LPIARVFYVNLKMNVLIVSYRGYGKSEGSP- 124 (300)
T ss_pred cccCCCceEEEEEcCcceeEeeeeec-ccCCCceEEEEccCCCcccch-hhHHHHHHHHcCceEEEEEeeccccCCCCc-
Confidence 33578999999999999999887766 455899999999999987766 3444444 3447899999999999999876
Q ss_pred cccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHH
Q 018375 90 YIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILT 169 (357)
Q Consensus 90 ~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~ 169 (357)
+-+...-|..++++++..+...+..++++.|.|+||.+|+.+|++..+++.++++-+.+...+....+.-..
T Consensus 125 ---sE~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v~p----- 196 (300)
T KOG4391|consen 125 ---SEEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLVFP----- 196 (300)
T ss_pred ---cccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhheecc-----
Confidence 445667788999999988888888999999999999999999999999999999999876653221110000
Q ss_pred HHHhhcccCcccCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCCccCC
Q 018375 170 RVEEIIPKWKIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTD 249 (357)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~ 249 (357)
.....++.+ ...........+.+...|.|++.|.+|.++|
T Consensus 197 ~~~k~i~~l----------------------------------------c~kn~~~S~~ki~~~~~P~LFiSGlkDelVP 236 (300)
T KOG4391|consen 197 FPMKYIPLL----------------------------------------CYKNKWLSYRKIGQCRMPFLFISGLKDELVP 236 (300)
T ss_pred chhhHHHHH----------------------------------------HHHhhhcchhhhccccCceEEeecCccccCC
Confidence 000000000 0000011122345668999999999999999
Q ss_pred hHHHHHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHHhccc
Q 018375 250 PEVSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDERMSD 303 (357)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~~~ 303 (357)
+...+++++.+++...++..+|++.|...+- .+. .++.|.+||.+....
T Consensus 237 P~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i-~dG----Yfq~i~dFlaE~~~~ 285 (300)
T KOG4391|consen 237 PVMMRQLYELCPSRTKRLAEFPDGTHNDTWI-CDG----YFQAIEDFLAEVVKS 285 (300)
T ss_pred cHHHHHHHHhCchhhhhheeCCCCccCceEE-ecc----HHHHHHHHHHHhccC
Confidence 9999999999998889999999999987652 233 899999999987765
No 49
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.94 E-value=2.1e-25 Score=219.60 Aligned_cols=246 Identities=18% Similarity=0.222 Sum_probs=157.6
Q ss_pred CceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCC-------ccccchhhHHHHHHHHHHHHHhhhc
Q 018375 41 PKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGAR-------CYIKKFENIVNDCDDFFKSVCAQEE 113 (357)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~-------~~~~~~~~~~~d~~~~l~~l~~~~~ 113 (357)
.+++|||+||++++...| ..+...|.+. |+|+++|+||||.|.... ...++++.+++++.++++.+
T Consensus 1370 ~~~~vVllHG~~~s~~~w-~~~~~~L~~~-~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l----- 1442 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGEDW-IPIMKAISGS-ARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHI----- 1442 (1655)
T ss_pred CCCeEEEECCCCCCHHHH-HHHHHHHhCC-CEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHh-----
Confidence 467899999999998877 7888888765 999999999999997542 12357888999999999888
Q ss_pred cCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHH---HHHHHHH-----HhhcccCcccCccc
Q 018375 114 YTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVL---VNILTRV-----EEIIPKWKIVPTKD 185 (357)
Q Consensus 114 ~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~---~~~~~~~-----~~~~~~~~~~~~~~ 185 (357)
+.++++|+||||||.+++.++.++|++|+++|++++.............. ......+ ..+...|.. ..
T Consensus 1443 -~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~---~~ 1518 (1655)
T PLN02980 1443 -TPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYS---GE 1518 (1655)
T ss_pred -CCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhcc---HH
Confidence 67899999999999999999999999999999998754322111000000 0000000 000000000 00
Q ss_pred cchhhccChhHHHHHhhcccccCCccchHHHHHHHH--hhhhHhhccCCccccEEEEeeCCCccCChHHHHHHHHHccCC
Q 018375 186 VIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLR--TSMSLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYERASSR 263 (357)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~ 263 (357)
........+.......... ..............+. ...+..+.+.++++|+|+|+|++|..++ ..++.+.+.++..
T Consensus 1519 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a 1596 (1655)
T PLN02980 1519 LWKSLRNHPHFNKIVASRL-LHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKS 1596 (1655)
T ss_pred HhhhhccCHHHHHHHHHHH-hcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHcccc
Confidence 0000000000111010000 0000001111111111 1123446688999999999999999875 5666777776531
Q ss_pred ----------CceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHHhccc
Q 018375 264 ----------DKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDERMSD 303 (357)
Q Consensus 264 ----------~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~~~ 303 (357)
.+++++++++||.+++|+|+. +++.|.+||.+....
T Consensus 1597 ~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~----f~~~I~~FL~~~~~~ 1642 (1655)
T PLN02980 1597 KESGNDKGKEIIEIVEIPNCGHAVHLENPLP----VIRALRKFLTRLHNS 1642 (1655)
T ss_pred ccccccccccceEEEEECCCCCchHHHCHHH----HHHHHHHHHHhcccc
Confidence 258999999999999999999 999999999976544
No 50
>PRK10566 esterase; Provisional
Probab=99.94 E-value=1.9e-24 Score=175.98 Aligned_cols=214 Identities=21% Similarity=0.274 Sum_probs=138.6
Q ss_pred CCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCc-c-c----cchhhHHHHHHHHHHHHHhhhc
Q 018375 40 TPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARC-Y-I----KKFENIVNDCDDFFKSVCAQEE 113 (357)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~-~-~----~~~~~~~~d~~~~l~~l~~~~~ 113 (357)
++.|+||++||++++...| ..++..|+++||.|+++|+||+|.+..... . . .......+|+.++++++..+..
T Consensus 25 ~~~p~vv~~HG~~~~~~~~-~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 103 (249)
T PRK10566 25 TPLPTVFFYHGFTSSKLVY-SYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGW 103 (249)
T ss_pred CCCCEEEEeCCCCcccchH-HHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3568999999998886665 789999999999999999999997642211 1 0 0112345677778888766544
Q ss_pred cCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHHHHHhhcccCcccCccccchhhccC
Q 018375 114 YTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTRVEEIIPKWKIVPTKDVIDSAFKD 193 (357)
Q Consensus 114 ~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (357)
.+.++++++|||+||.+++.++.++|+....++++++... ..+... .++.... . .
T Consensus 104 ~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~---~~~~~~~-~----------~ 158 (249)
T PRK10566 104 LLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYF-----------TSLART---LFPPLIP-E----------T 158 (249)
T ss_pred cCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHH-----------HHHHHH---hcccccc-c----------c
Confidence 5678999999999999999999988874444444433210 000000 0000000 0 0
Q ss_pred hhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCc-cccEEEEeeCCCccCChHHHHHHHHHccCC----CceEE
Q 018375 194 SIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKV-MIPFFVLHGEADTVTDPEVSKALYERASSR----DKTIK 268 (357)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~----~~~~~ 268 (357)
+.... .......... ..+....+.++ ++|+|+++|++|.++|++.++.+.+.+... +++++
T Consensus 159 ~~~~~-------------~~~~~~~~~~-~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~ 224 (249)
T PRK10566 159 AAQQA-------------EFNNIVAPLA-EWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCL 224 (249)
T ss_pred cccHH-------------HHHHHHHHHh-hcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEE
Confidence 00000 0000000000 01222334555 689999999999999999999999888652 36788
Q ss_pred EcCCCCcccccCCCChhhhhHHHHHHHHHHHhc
Q 018375 269 LYPGMWHALTSGEPDENIDIVFGDIIAWLDERM 301 (357)
Q Consensus 269 ~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~ 301 (357)
+++++||.+. + . ..+.+.+||++++
T Consensus 225 ~~~~~~H~~~---~-~----~~~~~~~fl~~~~ 249 (249)
T PRK10566 225 WEPGVRHRIT---P-E----ALDAGVAFFRQHL 249 (249)
T ss_pred ecCCCCCccC---H-H----HHHHHHHHHHhhC
Confidence 9999999863 2 3 7899999998764
No 51
>PLN02872 triacylglycerol lipase
Probab=99.93 E-value=6.5e-25 Score=186.22 Aligned_cols=281 Identities=18% Similarity=0.217 Sum_probs=173.4
Q ss_pred CccceeeeeEEecCCcEEEEEEEcCC-----CCCceEEEEEccCCccccccH-----HHHHHHHhhCCcEEEEeCCCCCc
Q 018375 13 TVVEYQEEYIRNARGVQLFTCRWLPF-----STPKAVVFLCHGYGMECSGFM-----RECGTRLASAGYAVFGIDYEGHG 82 (357)
Q Consensus 13 ~~~~~~~~~~~~~~g~~l~~~~~~p~-----~~~~p~vv~lHG~~~~~~~~~-----~~~~~~l~~~G~~vi~~d~~G~G 82 (357)
.++..|++.+.+.||..|....+.+. ..++|+||++||+++++..|. ..++..|+++||+|+++|.||++
T Consensus 40 ~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~ 119 (395)
T PLN02872 40 AGYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTR 119 (395)
T ss_pred cCCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccc
Confidence 36789999999999999988776432 124678999999988777662 35667899999999999999988
Q ss_pred cCCCC-------Cc-cccchhhHH-HHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCC---cccEEEEecc
Q 018375 83 RSRGA-------RC-YIKKFENIV-NDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPS---FWNGAVLVAP 150 (357)
Q Consensus 83 ~s~~~-------~~-~~~~~~~~~-~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~---~v~~~vl~~~ 150 (357)
.|.+. .. ..+++++++ .|+.++++++... ..++++++|||+||.+++.++ .+|+ +|+.+++++|
T Consensus 120 ~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~---~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P 195 (395)
T PLN02872 120 WSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSI---TNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCP 195 (395)
T ss_pred cccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhc---cCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcc
Confidence 66321 11 135778888 7999999998543 247899999999999998555 5676 5888999998
Q ss_pred ccccccccCChhHH--HHHHHHHHhhcccCcccCccccch----hhccChh-HH--------------------------
Q 018375 151 MCKISEKVKPHPVL--VNILTRVEEIIPKWKIVPTKDVID----SAFKDSI-KR-------------------------- 197 (357)
Q Consensus 151 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~-------------------------- 197 (357)
.........+.... ......+...+......+...... ....... ..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~~~~~p 275 (395)
T PLN02872 196 ISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDYYLEYEP 275 (395)
T ss_pred hhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhHHHhcCC
Confidence 86543322111100 000000100111111111100000 0000000 00
Q ss_pred ------------HHHhhcccccCCccchHHHHHHHHhhhhHhhccCCc--cccEEEEeeCCCccCChHHHHHHHHHccCC
Q 018375 198 ------------EEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKV--MIPFFVLHGEADTVTDPEVSKALYERASSR 263 (357)
Q Consensus 198 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~ 263 (357)
+..........+..... -...+.......-.+.++ ++|+++++|++|.+++++.++.+.+.++.
T Consensus 276 agtS~k~~~H~~Q~~~s~~f~~yDyg~~~-n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~- 353 (395)
T PLN02872 276 HPSSVKNLRHLFQMIRKGTFAHYDYGIFK-NLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPS- 353 (395)
T ss_pred CcchHHHHHHHHHHHhcCCcccCCCCchh-hHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCC-
Confidence 00000000000000000 001111112223356777 58999999999999999999999999863
Q ss_pred CceEEEcCCCCccccc---CCCChhhhhHHHHHHHHHHHhccc
Q 018375 264 DKTIKLYPGMWHALTS---GEPDENIDIVFGDIIAWLDERMSD 303 (357)
Q Consensus 264 ~~~~~~~~~~gH~~~~---~~p~~~~~~~~~~i~~fl~~~~~~ 303 (357)
..+++.+++++|..++ +.|+. +.+.|.+|++++.+.
T Consensus 354 ~~~l~~l~~~gH~dfi~~~eape~----V~~~Il~fL~~~~~~ 392 (395)
T PLN02872 354 KPELLYLENYGHIDFLLSTSAKED----VYNHMIQFFRSLGKS 392 (395)
T ss_pred ccEEEEcCCCCCHHHHhCcchHHH----HHHHHHHHHHHhhhc
Confidence 4688899999996443 55666 999999999876554
No 52
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.93 E-value=1.5e-24 Score=184.13 Aligned_cols=262 Identities=15% Similarity=0.131 Sum_probs=164.1
Q ss_pred CCcEEEEEEEcC-CCCCceEEEEEccCCccc------------cccHHHHHH---HHhhCCcEEEEeCCCCCccCCCC--
Q 018375 26 RGVQLFTCRWLP-FSTPKAVVFLCHGYGMEC------------SGFMRECGT---RLASAGYAVFGIDYEGHGRSRGA-- 87 (357)
Q Consensus 26 ~g~~l~~~~~~p-~~~~~p~vv~lHG~~~~~------------~~~~~~~~~---~l~~~G~~vi~~d~~G~G~s~~~-- 87 (357)
...+|.|..|+. ...+.++||++|++++++ ..||..++- .|-...|.||++|..|-|.|..+
T Consensus 39 ~~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~ 118 (389)
T PRK06765 39 PDVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNV 118 (389)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCC
Confidence 356899999987 445568999999998853 245565532 34344599999999997753211
Q ss_pred ------------------CccccchhhHHHHHHHHHHHHHhhhccCCccEE-EEEeChhHHHHHHHHhcCCCcccEEEEe
Q 018375 88 ------------------RCYIKKFENIVNDCDDFFKSVCAQEEYTDKARF-LYGESMGGAVTLLLHKKDPSFWNGAVLV 148 (357)
Q Consensus 88 ------------------~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~-lvG~S~Gg~~a~~~a~~~p~~v~~~vl~ 148 (357)
....++++++++++..+++++ +..++. ++||||||++|+.+|.++|++|+++|++
T Consensus 119 g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~l------gi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~i 192 (389)
T PRK06765 119 ITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSL------GIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGV 192 (389)
T ss_pred CCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHc------CCCCceEEEEECHHHHHHHHHHHHChHhhheEEEE
Confidence 112358899999999999988 788886 9999999999999999999999999999
Q ss_pred ccccccccccCChhHHHHHHHHHHhhcccCcccCc-------ccc------chh-hccChhHHHHHhhc-----------
Q 018375 149 APMCKISEKVKPHPVLVNILTRVEEIIPKWKIVPT-------KDV------IDS-AFKDSIKREEIRNN----------- 203 (357)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~------~~~-~~~~~~~~~~~~~~----------- 203 (357)
++......... .......... ....+.|..... ..+ ... .....+........
T Consensus 193 a~~~~~~~~~~-~~~~~~~~~a-i~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~ 270 (389)
T PRK06765 193 IGNPQNDAWTS-VNVLQNWAEA-IRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKV 270 (389)
T ss_pred ecCCCCChhHH-HHHHHHHHHH-HHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccc
Confidence 87654321110 0000000000 001111110000 000 000 00000000000000
Q ss_pred ----------------ccccCCccchHHHHHHHHhh------hhHhhccCCccccEEEEeeCCCccCChHHHHHHHHHcc
Q 018375 204 ----------------KLIYQDKPRLKTALEMLRTS------MSLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYERAS 261 (357)
Q Consensus 204 ----------------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~ 261 (357)
.....+...+......+... .++.+.+.++++|+|+|+|++|.++|++.++.+.+.++
T Consensus 271 ~~~~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp 350 (389)
T PRK06765 271 STLTSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQ 350 (389)
T ss_pred cchhhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhh
Confidence 00000000111111111111 13456778899999999999999999999999998885
Q ss_pred C--CCceEEEcCC-CCcccccCCCChhhhhHHHHHHHHHHH
Q 018375 262 S--RDKTIKLYPG-MWHALTSGEPDENIDIVFGDIIAWLDE 299 (357)
Q Consensus 262 ~--~~~~~~~~~~-~gH~~~~~~p~~~~~~~~~~i~~fl~~ 299 (357)
. ++++++++++ +||..++++|+. +.+.|.+||++
T Consensus 351 ~~~~~a~l~~I~s~~GH~~~le~p~~----~~~~I~~FL~~ 387 (389)
T PRK06765 351 KQGKYAEVYEIESINGHMAGVFDIHL----FEKKIYEFLNR 387 (389)
T ss_pred hcCCCeEEEEECCCCCcchhhcCHHH----HHHHHHHHHcc
Confidence 3 3689999985 999999999998 99999999965
No 53
>PRK05855 short chain dehydrogenase; Validated
Probab=99.93 E-value=1.1e-24 Score=199.43 Aligned_cols=264 Identities=13% Similarity=0.137 Sum_probs=157.4
Q ss_pred eeEEecCCcEEEEEEEcCCCCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCc-cccchhhHH
Q 018375 20 EYIRNARGVQLFTCRWLPFSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARC-YIKKFENIV 98 (357)
Q Consensus 20 ~~~~~~~g~~l~~~~~~p~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~-~~~~~~~~~ 98 (357)
.++...+|.+|+|..+++ ...|+|||+||++++...| ..+.+.| ..||+|+++|+||||.|+.+.. ..+++++++
T Consensus 5 ~~~~~~~g~~l~~~~~g~--~~~~~ivllHG~~~~~~~w-~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a 80 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGD--PDRPTVVLVHGYPDNHEVW-DGVAPLL-ADRFRVVAYDVRGAGRSSAPKRTAAYTLARLA 80 (582)
T ss_pred EEEEeeCCEEEEEEEcCC--CCCCeEEEEcCCCchHHHH-HHHHHHh-hcceEEEEecCCCCCCCCCCCcccccCHHHHH
Confidence 445667999999998853 3467899999999887766 7888888 4579999999999999986432 345899999
Q ss_pred HHHHHHHHHHHhhhccCCc-cEEEEEeChhHHHHHHHHhc--CCCcccEEEEeccccccc------cccC--ChhHHHHH
Q 018375 99 NDCDDFFKSVCAQEEYTDK-ARFLYGESMGGAVTLLLHKK--DPSFWNGAVLVAPMCKIS------EKVK--PHPVLVNI 167 (357)
Q Consensus 99 ~d~~~~l~~l~~~~~~~~~-~v~lvG~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~~~------~~~~--~~~~~~~~ 167 (357)
+|+..+++.+ +.. +++|+||||||.+++.++.. .+..+..++.+++..... .... ........
T Consensus 81 ~dl~~~i~~l------~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (582)
T PRK05855 81 DDFAAVIDAV------SPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSGLRRPTPRRLARA 154 (582)
T ss_pred HHHHHHHHHh------CCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhcccccchhhhhHH
Confidence 9999999988 444 59999999999999888765 234455554444321100 0000 00000000
Q ss_pred HHHHHhhc-c---cCcccCccccchhhccChhHHHHHhhcccccCCc-------cchHHHHHHHHh---hhhHhhccCCc
Q 018375 168 LTRVEEII-P---KWKIVPTKDVIDSAFKDSIKREEIRNNKLIYQDK-------PRLKTALEMLRT---SMSLEDSLSKV 233 (357)
Q Consensus 168 ~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~---~~~~~~~~~~i 233 (357)
........ . ...... .......... ................ .........+.. ..........+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (582)
T PRK05855 155 LGQLLRSWYIYLFHLPVLP-ELLWRLGLGR-AWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPRERYT 232 (582)
T ss_pred HHHHhhhHHHHHHhCCCCc-HHHhccchhh-HHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhccCccCCc
Confidence 00000000 0 000000 0000000000 0000000000000000 000000001100 01111234568
Q ss_pred cccEEEEeeCCCccCChHHHHHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHHhcc
Q 018375 234 MIPFFVLHGEADTVTDPEVSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDERMS 302 (357)
Q Consensus 234 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~~ 302 (357)
++|+|+|+|++|.++++...+.+.+.++ +.++++++ +||++++++|+. +.+.|.+|+.+...
T Consensus 233 ~~P~lii~G~~D~~v~~~~~~~~~~~~~--~~~~~~~~-~gH~~~~e~p~~----~~~~i~~fl~~~~~ 294 (582)
T PRK05855 233 DVPVQLIVPTGDPYVRPALYDDLSRWVP--RLWRREIK-AGHWLPMSHPQV----LAAAVAEFVDAVEG 294 (582)
T ss_pred cCceEEEEeCCCcccCHHHhccccccCC--cceEEEcc-CCCcchhhChhH----HHHHHHHHHHhccC
Confidence 9999999999999999998888776663 67787776 699999999998 99999999987543
No 54
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.93 E-value=4e-25 Score=168.81 Aligned_cols=221 Identities=21% Similarity=0.295 Sum_probs=168.1
Q ss_pred ceeeeeEEecCCcEEEEEEEcCCCCCceEEEEEccCCccccccHHHHHHHHhh-CCcEEEEeCCCCCccCCCCCccccch
Q 018375 16 EYQEEYIRNARGVQLFTCRWLPFSTPKAVVFLCHGYGMECSGFMRECGTRLAS-AGYAVFGIDYEGHGRSRGARCYIKKF 94 (357)
Q Consensus 16 ~~~~~~~~~~~g~~l~~~~~~p~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~-~G~~vi~~d~~G~G~s~~~~~~~~~~ 94 (357)
..+-....+..|..+....+.|.....++|+++||...+.... ..+...|.. -+++|+.+|++|+|.|.+.+..
T Consensus 34 ~v~v~~~~t~rgn~~~~~y~~~~~~~~~~lly~hGNa~Dlgq~-~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE---- 108 (258)
T KOG1552|consen 34 FVEVFKVKTSRGNEIVCMYVRPPEAAHPTLLYSHGNAADLGQM-VELFKELSIFLNCNVVSYDYSGYGRSSGKPSE---- 108 (258)
T ss_pred ccceEEeecCCCCEEEEEEEcCccccceEEEEcCCcccchHHH-HHHHHHHhhcccceEEEEecccccccCCCccc----
Confidence 4455667788898998888888666679999999986664432 233344433 2699999999999999987643
Q ss_pred hhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHHHHHhh
Q 018375 95 ENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTRVEEI 174 (357)
Q Consensus 95 ~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (357)
....+|+.++.++|+...+ ..++++|+|+|+|+..++.+|.+.| ++++||.+|.........
T Consensus 109 ~n~y~Di~avye~Lr~~~g-~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~rv~~--------------- 170 (258)
T KOG1552|consen 109 RNLYADIKAVYEWLRNRYG-SPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMRVAF--------------- 170 (258)
T ss_pred ccchhhHHHHHHHHHhhcC-CCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhhhhc---------------
Confidence 4678899999999987766 6899999999999999999999998 999999999765321110
Q ss_pred cccCcccCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCCccCChHHHH
Q 018375 175 IPKWKIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDPEVSK 254 (357)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~ 254 (357)
+.... .+. +. .....+.++.|+||+|++||+.|.+++.....
T Consensus 171 -~~~~~----~~~-------------------~d--------------~f~~i~kI~~i~~PVLiiHgtdDevv~~sHg~ 212 (258)
T KOG1552|consen 171 -PDTKT----TYC-------------------FD--------------AFPNIEKISKITCPVLIIHGTDDEVVDFSHGK 212 (258)
T ss_pred -cCcce----EEe-------------------ec--------------cccccCcceeccCCEEEEecccCceecccccH
Confidence 00000 000 00 01114567888999999999999999999999
Q ss_pred HHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHHhccc
Q 018375 255 ALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDERMSD 303 (357)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~~~ 303 (357)
++++.++. ..+-.++.|+||.... ...+ +...+..|+.....+
T Consensus 213 ~Lye~~k~-~~epl~v~g~gH~~~~-~~~~----yi~~l~~f~~~~~~~ 255 (258)
T KOG1552|consen 213 ALYERCKE-KVEPLWVKGAGHNDIE-LYPE----YIEHLRRFISSVLPS 255 (258)
T ss_pred HHHHhccc-cCCCcEEecCCCcccc-cCHH----HHHHHHHHHHHhccc
Confidence 99999985 5788999999999874 3334 899999999877654
No 55
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.93 E-value=5.1e-24 Score=169.02 Aligned_cols=260 Identities=16% Similarity=0.171 Sum_probs=172.2
Q ss_pred cEEEEEEE-cC-CCCCceEEEEEccCCccccccHHHHHHHHhhC-CcEEEEeCCCCCccCCCCCccccchhhHHHHHHHH
Q 018375 28 VQLFTCRW-LP-FSTPKAVVFLCHGYGMECSGFMRECGTRLASA-GYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDF 104 (357)
Q Consensus 28 ~~l~~~~~-~p-~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~-G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~ 104 (357)
.++.|..+ .. .....|+++++||+.++...| ..+...|+.. +-.|+++|.|.||.|...... +...+++|+..+
T Consensus 36 ~~l~y~~~~~~~~~~~~Pp~i~lHGl~GS~~Nw-~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h--~~~~ma~dv~~F 112 (315)
T KOG2382|consen 36 VRLAYDSVYSSENLERAPPAIILHGLLGSKENW-RSVAKNLSRKLGRDVYAVDVRNHGSSPKITVH--NYEAMAEDVKLF 112 (315)
T ss_pred cccceeeeecccccCCCCceEEecccccCCCCH-HHHHHHhcccccCceEEEecccCCCCcccccc--CHHHHHHHHHHH
Confidence 56777665 33 345678999999999998888 8999999876 779999999999999877665 689999999999
Q ss_pred HHHHHhhhccCCccEEEEEeChhH-HHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHHHHHhhcccCcccCc
Q 018375 105 FKSVCAQEEYTDKARFLYGESMGG-AVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTRVEEIIPKWKIVPT 183 (357)
Q Consensus 105 l~~l~~~~~~~~~~v~lvG~S~Gg-~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (357)
++..... ....++.++|||||| .+++..+..+|+.+..+|++.-....... ........+..+............
T Consensus 113 i~~v~~~--~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~--~~~e~~e~i~~m~~~d~~~~~~~~ 188 (315)
T KOG2382|consen 113 IDGVGGS--TRLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGR--SYGEYRELIKAMIQLDLSIGVSRG 188 (315)
T ss_pred HHHcccc--cccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCc--ccchHHHHHHHHHhcccccccccc
Confidence 9998421 136789999999999 77888888999999999988654431111 111112222222111111000010
Q ss_pred c-cc---chhhccChhHHHHHhhccc------ccCCccchHHHHHHHHh--hhhHhhcc--CCccccEEEEeeCCCccCC
Q 018375 184 K-DV---IDSAFKDSIKREEIRNNKL------IYQDKPRLKTALEMLRT--SMSLEDSL--SKVMIPFFVLHGEADTVTD 249 (357)
Q Consensus 184 ~-~~---~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~--~~~~~~~~--~~i~~Pvl~i~g~~D~~~~ 249 (357)
. .. +.....+......+..+.. .+.....+....+.+.. .......+ .....|||++.|.++..++
T Consensus 189 rke~~~~l~~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~ 268 (315)
T KOG2382|consen 189 RKEALKSLIEVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVP 268 (315)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcC
Confidence 0 01 0111112222222222211 11122223333333322 11222222 5568899999999999999
Q ss_pred hHHHHHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHHh
Q 018375 250 PEVSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDER 300 (357)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~ 300 (357)
.+.-..+.+.+ +.++++.++++||+.++|+|+. +.+.|.+|+..+
T Consensus 269 ~~~~~~~~~~f--p~~e~~~ld~aGHwVh~E~P~~----~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 269 DEHYPRMEKIF--PNVEVHELDEAGHWVHLEKPEE----FIESISEFLEEP 313 (315)
T ss_pred hhHHHHHHHhc--cchheeecccCCceeecCCHHH----HHHHHHHHhccc
Confidence 99888888877 4799999999999999999999 999999998764
No 56
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.92 E-value=3.2e-23 Score=176.46 Aligned_cols=262 Identities=18% Similarity=0.165 Sum_probs=156.6
Q ss_pred CCcEEEEEEEcCC--CCCceEEEEEccCCcccccc----HHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHH
Q 018375 26 RGVQLFTCRWLPF--STPKAVVFLCHGYGMECSGF----MRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVN 99 (357)
Q Consensus 26 ~g~~l~~~~~~p~--~~~~p~vv~lHG~~~~~~~~----~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~ 99 (357)
++..+. .|.|. ...+++||++||+..+...+ ...+++.|+++||+|+++|++|+|.+... .++++++.
T Consensus 46 ~~~~l~--~~~~~~~~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~----~~~~d~~~ 119 (350)
T TIGR01836 46 DKVVLY--RYTPVKDNTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY----LTLDDYIN 119 (350)
T ss_pred CcEEEE--EecCCCCcCCCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc----CCHHHHHH
Confidence 444443 35553 23355699999975443222 25799999999999999999999987543 26677764
Q ss_pred -HHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHH------HHHHHHHH
Q 018375 100 -DCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVL------VNILTRVE 172 (357)
Q Consensus 100 -d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~------~~~~~~~~ 172 (357)
++.++++++.+.. +..+++++||||||.+++.+++.+|++|+++|+++++.+........... ........
T Consensus 120 ~~~~~~v~~l~~~~--~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (350)
T TIGR01836 120 GYIDKCVDYICRTS--KLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTMG 197 (350)
T ss_pred HHHHHHHHHHHHHh--CCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHHHHHHhcC
Confidence 4788888885543 56799999999999999999999999999999999987754321110000 00000000
Q ss_pred hhcccC-------cccCccccch------hhccChhHHHHHh------hcccccCCccchHHHHHHH-Hhhh--------
Q 018375 173 EIIPKW-------KIVPTKDVID------SAFKDSIKREEIR------NNKLIYQDKPRLKTALEML-RTSM-------- 224 (357)
Q Consensus 173 ~~~~~~-------~~~~~~~~~~------~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~-~~~~-------- 224 (357)
.++.+ ...+...... ....++....... .+...+. ...+......+ ....
T Consensus 198 -~~p~~~~~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~-~~~~~~~~~~~~~~n~l~~g~~~~ 275 (350)
T TIGR01836 198 -NIPGELLNLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQA-GEAFRQFVKDFYQQNGLINGEVEI 275 (350)
T ss_pred -CCCHHHHHHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCcc-HHHHHHHHHHHHhcCcccCCeeEE
Confidence 00000 0000000000 0001111100000 0000000 00011111111 0000
Q ss_pred -hHhhccCCccccEEEEeeCCCccCChHHHHHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHH
Q 018375 225 -SLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDE 299 (357)
Q Consensus 225 -~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~ 299 (357)
.....+.++++|+++++|++|.++|++.++.+.+.+.+.++++++++ +||...+..+. ..+++++.|.+||.+
T Consensus 276 ~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~-~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 276 GGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGK-AQKEVPPAIGKWLQA 349 (350)
T ss_pred CCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECch-hHhhhhHHHHHHHHh
Confidence 01123667899999999999999999999999998876567888888 58887766654 245599999999975
No 57
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.92 E-value=1.9e-23 Score=189.08 Aligned_cols=248 Identities=19% Similarity=0.179 Sum_probs=171.0
Q ss_pred ccceeeeeEEecCCcEEEEEEEcCCCC----CceEEEEEccCCccccc-cHHHHHHHHhhCCcEEEEeCCCCCcc---CC
Q 018375 14 VVEYQEEYIRNARGVQLFTCRWLPFST----PKAVVFLCHGYGMECSG-FMRECGTRLASAGYAVFGIDYEGHGR---SR 85 (357)
Q Consensus 14 ~~~~~~~~~~~~~g~~l~~~~~~p~~~----~~p~vv~lHG~~~~~~~-~~~~~~~~l~~~G~~vi~~d~~G~G~---s~ 85 (357)
..+.+...+...||.+|.++++.|.+. +.|+||++||.+..... .+....+.|+.+||.|+.+|+||.+. .-
T Consensus 362 ~~~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F 441 (620)
T COG1506 362 LAEPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREF 441 (620)
T ss_pred cCCceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHH
Confidence 456778888999999999999999332 24999999998754332 23677889999999999999997533 21
Q ss_pred CCCccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHH
Q 018375 86 GARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLV 165 (357)
Q Consensus 86 ~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~ 165 (357)
.......--....+|+.++++++.+...++.+++.|+|+|+||++++.++.+.| .+++.+...+..........
T Consensus 442 ~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~~~~----- 515 (620)
T COG1506 442 ADAIRGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYFGE----- 515 (620)
T ss_pred HHhhhhccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhhccc-----
Confidence 111111122345778888899777666667789999999999999999999988 67777777665432110000
Q ss_pred HHHHHHHhhcccCcccCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCC
Q 018375 166 NILTRVEEIIPKWKIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEAD 245 (357)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D 245 (357)
.-..+. .........+. . ....+ ..........++++|+|+|||+.|
T Consensus 516 ----~~~~~~---------~~~~~~~~~~~----------~---------~~~~~-~~~sp~~~~~~i~~P~LliHG~~D 562 (620)
T COG1506 516 ----STEGLR---------FDPEENGGGPP----------E---------DREKY-EDRSPIFYADNIKTPLLLIHGEED 562 (620)
T ss_pred ----cchhhc---------CCHHHhCCCcc----------c---------ChHHH-HhcChhhhhcccCCCEEEEeecCC
Confidence 000000 00000000000 0 00000 112334467889999999999999
Q ss_pred ccCChHHHHHHHHHccC--CCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHHhccc
Q 018375 246 TVTDPEVSKALYERASS--RDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDERMSD 303 (357)
Q Consensus 246 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~~~ 303 (357)
..|+.+++.++.+++.. .+++++++|+.+|.+.- |+ ...++.+.+.+|++++++.
T Consensus 563 ~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~--~~-~~~~~~~~~~~~~~~~~~~ 619 (620)
T COG1506 563 DRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSR--PE-NRVKVLKEILDWFKRHLKQ 619 (620)
T ss_pred ccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCC--ch-hHHHHHHHHHHHHHHHhcC
Confidence 99999999999998874 67899999999999874 33 4666999999999998864
No 58
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.91 E-value=5.4e-24 Score=154.78 Aligned_cols=247 Identities=15% Similarity=0.125 Sum_probs=158.0
Q ss_pred ecCCcEEEEEEEcCCCCCceEEEEEccCCcc-ccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccc--cchhhHHHH
Q 018375 24 NARGVQLFTCRWLPFSTPKAVVFLCHGYGME-CSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYI--KKFENIVND 100 (357)
Q Consensus 24 ~~~g~~l~~~~~~p~~~~~p~vv~lHG~~~~-~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~--~~~~~~~~d 100 (357)
..+|.+|.|+.++. ....|++++|.-++ ...|-..+.+.+...-+.|+++|.||+|.|.++.... .-+...+++
T Consensus 27 ~vng~ql~y~~~G~---G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~ 103 (277)
T KOG2984|consen 27 HVNGTQLGYCKYGH---GPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEY 103 (277)
T ss_pred eecCceeeeeecCC---CCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHH
Confidence 34899999999853 23458899997555 4455333333333335899999999999998776532 123344455
Q ss_pred HHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHHHHHhhcccCcc
Q 018375 101 CDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTRVEEIIPKWKI 180 (357)
Q Consensus 101 ~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (357)
...+++.| +.+++.++|||-||..|+..|+++++.|.++|++++.......... ...-..... .|..
T Consensus 104 avdLM~aL------k~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~m---a~kgiRdv~----kWs~ 170 (277)
T KOG2984|consen 104 AVDLMEAL------KLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAM---AFKGIRDVN----KWSA 170 (277)
T ss_pred HHHHHHHh------CCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHH---HHhchHHHh----hhhh
Confidence 55556666 7899999999999999999999999999999999876544322100 000000011 1110
Q ss_pred cCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCCccCChHHHHHHHHHc
Q 018375 181 VPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYERA 260 (357)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~ 260 (357)
... .-....+.....+..+..... .......+....-.+..+.+++||+|+++|+.|++++...+-.+....
T Consensus 171 r~R-~P~e~~Yg~e~f~~~wa~wvD-------~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~ 242 (277)
T KOG2984|consen 171 RGR-QPYEDHYGPETFRTQWAAWVD-------VVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLK 242 (277)
T ss_pred hhc-chHHHhcCHHHHHHHHHHHHH-------HHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhc
Confidence 000 111111111111111110000 000000011122345678999999999999999999988887777776
Q ss_pred cCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHHh
Q 018375 261 SSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDER 300 (357)
Q Consensus 261 ~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~ 300 (357)
+ .+++.+.|.++|.+++..+++ |+..+.+||++.
T Consensus 243 ~--~a~~~~~peGkHn~hLrya~e----Fnklv~dFl~~~ 276 (277)
T KOG2984|consen 243 S--LAKVEIHPEGKHNFHLRYAKE----FNKLVLDFLKST 276 (277)
T ss_pred c--cceEEEccCCCcceeeechHH----HHHHHHHHHhcc
Confidence 4 799999999999999999888 999999999763
No 59
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.89 E-value=4.3e-22 Score=148.19 Aligned_cols=145 Identities=34% Similarity=0.574 Sum_probs=115.8
Q ss_pred EEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEEEEE
Q 018375 44 VVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYG 123 (357)
Q Consensus 44 ~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG 123 (357)
+||++||++++...| ..+++.|+++||.|+++|+|++|.+... .++..+++.+..... +.++++++|
T Consensus 1 ~vv~~HG~~~~~~~~-~~~~~~l~~~G~~v~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~-~~~~i~l~G 67 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDY-QPLAEALAEQGYAVVAFDYPGHGDSDGA-----------DAVERVLADIRAGYP-DPDRIILIG 67 (145)
T ss_dssp EEEEECTTTTTTHHH-HHHHHHHHHTTEEEEEESCTTSTTSHHS-----------HHHHHHHHHHHHHHC-TCCEEEEEE
T ss_pred CEEEECCCCCCHHHH-HHHHHHHHHCCCEEEEEecCCCCccchh-----------HHHHHHHHHHHhhcC-CCCcEEEEE
Confidence 589999999987766 8999999999999999999999987221 144444444322222 678999999
Q ss_pred eChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHHHHHhhcccCcccCccccchhhccChhHHHHHhhc
Q 018375 124 ESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTRVEEIIPKWKIVPTKDVIDSAFKDSIKREEIRNN 203 (357)
Q Consensus 124 ~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (357)
||+||.+++.++.++ .+++++|++++...
T Consensus 68 ~S~Gg~~a~~~~~~~-~~v~~~v~~~~~~~-------------------------------------------------- 96 (145)
T PF12695_consen 68 HSMGGAIAANLAARN-PRVKAVVLLSPYPD-------------------------------------------------- 96 (145)
T ss_dssp ETHHHHHHHHHHHHS-TTESEEEEESESSG--------------------------------------------------
T ss_pred EccCcHHHHHHhhhc-cceeEEEEecCccc--------------------------------------------------
Confidence 999999999999988 67999999998311
Q ss_pred ccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCCccCChHHHHHHHHHccCCCceEEEcCCCCcc
Q 018375 204 KLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYERASSRDKTIKLYPGMWHA 276 (357)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 276 (357)
.+.+.+.++|+++++|++|..++.+..+.+++.++ .+.+++++++++|+
T Consensus 97 -----------------------~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 97 -----------------------SEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALP-GPKELYIIPGAGHF 145 (145)
T ss_dssp -----------------------CHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHC-SSEEEEEETTS-TT
T ss_pred -----------------------hhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcC-CCcEEEEeCCCcCc
Confidence 12234566799999999999999999999999997 47999999999995
No 60
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.89 E-value=5e-21 Score=151.57 Aligned_cols=281 Identities=18% Similarity=0.179 Sum_probs=168.4
Q ss_pred ccceeeeeEEecCCcEEEEEEEc-CCCCCceEEEEEccCCccc-cccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccc
Q 018375 14 VVEYQEEYIRNARGVQLFTCRWL-PFSTPKAVVFLCHGYGMEC-SGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYI 91 (357)
Q Consensus 14 ~~~~~~~~~~~~~g~~l~~~~~~-p~~~~~p~vv~lHG~~~~~-~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~ 91 (357)
.+.+....+.+.||..+-..+.. |.+...|.||++||+.+++ +.|.+.+...+.++||.|+++++||++.+.......
T Consensus 46 ~~~~~re~v~~pdg~~~~ldw~~~p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~ 125 (345)
T COG0429 46 KVAYTRERLETPDGGFIDLDWSEDPRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRL 125 (345)
T ss_pred ccccceEEEEcCCCCEEEEeeccCccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcce
Confidence 34555667788888777666665 5666789999999986653 457788999999999999999999999887644433
Q ss_pred cchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhH-HHHHHHHhcCCC-cccEEEEecccccccccc---CCh-----
Q 018375 92 KKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGG-AVTLLLHKKDPS-FWNGAVLVAPMCKISEKV---KPH----- 161 (357)
Q Consensus 92 ~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg-~~a~~~a~~~p~-~v~~~vl~~~~~~~~~~~---~~~----- 161 (357)
++. .+.+|+..++++++. .....++..+|.|+|| +++..++.+-.+ .+.+.+.++.+.++.... ...
T Consensus 126 yh~-G~t~D~~~~l~~l~~--~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~l 202 (345)
T COG0429 126 YHS-GETEDIRFFLDWLKA--RFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRL 202 (345)
T ss_pred ecc-cchhHHHHHHHHHHH--hCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhh
Confidence 332 334899999999954 3368899999999999 555555543222 356666666555442110 000
Q ss_pred ---hHHHHHHHHHHhhcccCcccCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEE
Q 018375 162 ---PVLVNILTRVEEIIPKWKIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFF 238 (357)
Q Consensus 162 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl 238 (357)
.+...+...+................... ...+.....+.......-.+....++++. .+....+.+|.+|+|
T Consensus 203 y~r~l~~~L~~~~~~kl~~l~~~~p~~~~~~i---k~~~ti~eFD~~~Tap~~Gf~da~dYYr~-aSs~~~L~~Ir~PtL 278 (345)
T COG0429 203 YSRYLLRNLKRNAARKLKELEPSLPGTVLAAI---KRCRTIREFDDLLTAPLHGFADAEDYYRQ-ASSLPLLPKIRKPTL 278 (345)
T ss_pred hHHHHHHHHHHHHHHHHHhcCcccCcHHHHHH---HhhchHHhccceeeecccCCCcHHHHHHh-ccccccccccccceE
Confidence 11111111111111111000000000000 00011111111111111122233333333 344567899999999
Q ss_pred EEeeCCCccCChHHHHHHHHHccCCCceEEEcCCCCcccccCCCChhh-hhHHHHHHHHHHHhcc
Q 018375 239 VLHGEADTVTDPEVSKALYERASSRDKTIKLYPGMWHALTSGEPDENI-DIVFGDIIAWLDERMS 302 (357)
Q Consensus 239 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~-~~~~~~i~~fl~~~~~ 302 (357)
+|++.+|++++++......... ++++.+..-+.+||..++....... .-..+.|.+|++..+.
T Consensus 279 ii~A~DDP~~~~~~iP~~~~~~-np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~~ 342 (345)
T COG0429 279 IINAKDDPFMPPEVIPKLQEML-NPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFLE 342 (345)
T ss_pred EEecCCCCCCChhhCCcchhcC-CCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHHh
Confidence 9999999999987665554433 3689999999999999887433211 1366888899887654
No 61
>PRK11071 esterase YqiA; Provisional
Probab=99.89 E-value=1.1e-21 Score=150.94 Aligned_cols=185 Identities=17% Similarity=0.160 Sum_probs=121.8
Q ss_pred eEEEEEccCCccccccHH-HHHHHHhhC--CcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccE
Q 018375 43 AVVFLCHGYGMECSGFMR-ECGTRLASA--GYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKAR 119 (357)
Q Consensus 43 p~vv~lHG~~~~~~~~~~-~~~~~l~~~--G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v 119 (357)
|+||++||++++...|.. .+...+.+. +|+|+++|+||++ ++.++++.++++.+ +.+++
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~------------~~~~~~l~~l~~~~------~~~~~ 63 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP------------ADAAELLESLVLEH------GGDPL 63 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH------------HHHHHHHHHHHHHc------CCCCe
Confidence 579999999999887743 345666553 6999999999984 34567777777776 67899
Q ss_pred EEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHHHHHhhcccCcccCccccchhhccChhHHHH
Q 018375 120 FLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTRVEEIIPKWKIVPTKDVIDSAFKDSIKREE 199 (357)
Q Consensus 120 ~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (357)
+++||||||.+++.+|.++|. .+|+++|...... .+......... . .....+...
T Consensus 64 ~lvG~S~Gg~~a~~~a~~~~~---~~vl~~~~~~~~~-------------~~~~~~~~~~~-~--~~~~~~~~~------ 118 (190)
T PRK11071 64 GLVGSSLGGYYATWLSQCFML---PAVVVNPAVRPFE-------------LLTDYLGENEN-P--YTGQQYVLE------ 118 (190)
T ss_pred EEEEECHHHHHHHHHHHHcCC---CEEEECCCCCHHH-------------HHHHhcCCccc-c--cCCCcEEEc------
Confidence 999999999999999999983 4688888654211 01111110000 0 000000000
Q ss_pred HhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCCccCChHHHHHHHHHccCCCceEEEcCCCCccccc
Q 018375 200 IRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYERASSRDKTIKLYPGMWHALTS 279 (357)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 279 (357)
......... .+. ..+. ..+|+++++|++|+++|++.+.++++. ++.++++|++|.+.
T Consensus 119 --------------~~~~~d~~~-~~~-~~i~-~~~~v~iihg~~De~V~~~~a~~~~~~-----~~~~~~~ggdH~f~- 175 (190)
T PRK11071 119 --------------SRHIYDLKV-MQI-DPLE-SPDLIWLLQQTGDEVLDYRQAVAYYAA-----CRQTVEEGGNHAFV- 175 (190)
T ss_pred --------------HHHHHHHHh-cCC-ccCC-ChhhEEEEEeCCCCcCCHHHHHHHHHh-----cceEEECCCCcchh-
Confidence 111111110 011 1233 677889999999999999999999884 45668899999984
Q ss_pred CCCChhhhhHHHHHHHHHH
Q 018375 280 GEPDENIDIVFGDIIAWLD 298 (357)
Q Consensus 280 ~~p~~~~~~~~~~i~~fl~ 298 (357)
..++ +.+.|.+|+.
T Consensus 176 -~~~~----~~~~i~~fl~ 189 (190)
T PRK11071 176 -GFER----YFNQIVDFLG 189 (190)
T ss_pred -hHHH----hHHHHHHHhc
Confidence 2344 8999999974
No 62
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.89 E-value=2.3e-21 Score=154.11 Aligned_cols=200 Identities=22% Similarity=0.245 Sum_probs=138.5
Q ss_pred EEEEEcCCC-CCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCcc-CCCCCcc---c------cchhhHHH
Q 018375 31 FTCRWLPFS-TPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGR-SRGARCY---I------KKFENIVN 99 (357)
Q Consensus 31 ~~~~~~p~~-~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~-s~~~~~~---~------~~~~~~~~ 99 (357)
..++..|.+ ++.|.||++|++.+-. .+...+++.|++.||.|+++|+-+-.. ....... . ...+...+
T Consensus 2 ~ay~~~P~~~~~~~~Vvv~~d~~G~~-~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (218)
T PF01738_consen 2 DAYVARPEGGGPRPAVVVIHDIFGLN-PNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAA 80 (218)
T ss_dssp EEEEEEETTSSSEEEEEEE-BTTBS--HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHH
T ss_pred eEEEEeCCCCCCCCEEEEEcCCCCCc-hHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHH
Confidence 456677754 4789999999988764 444889999999999999999864433 1111100 0 01245677
Q ss_pred HHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHHHHHhhcccCc
Q 018375 100 DCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTRVEEIIPKWK 179 (357)
Q Consensus 100 d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (357)
|+.++++++..+...+..+|.++|+|+||.+++.++... ..++++|...|....
T Consensus 81 ~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~------------------------- 134 (218)
T PF01738_consen 81 DLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPP------------------------- 134 (218)
T ss_dssp HHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSG-------------------------
T ss_pred HHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCC-------------------------
Confidence 888999999877655678999999999999999999887 569999988771110
Q ss_pred ccCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCCccCChHHHHHHHHH
Q 018375 180 IVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYER 259 (357)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~ 259 (357)
........++++|+++++|++|+.++.+..+.+.+.
T Consensus 135 --------------------------------------------~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~ 170 (218)
T PF01738_consen 135 --------------------------------------------PPPLEDAPKIKAPVLILFGENDPFFPPEEVEALEEA 170 (218)
T ss_dssp --------------------------------------------GGHHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHH
T ss_pred --------------------------------------------CcchhhhcccCCCEeecCccCCCCCChHHHHHHHHH
Confidence 111234566789999999999999999988888887
Q ss_pred ccC--CCceEEEcCCCCcccccCCCC----hhhhhHHHHHHHHHHHhc
Q 018375 260 ASS--RDKTIKLYPGMWHALTSGEPD----ENIDIVFGDIIAWLDERM 301 (357)
Q Consensus 260 ~~~--~~~~~~~~~~~gH~~~~~~p~----~~~~~~~~~i~~fl~~~~ 301 (357)
+.. ..+++++|+|++|.+...... ...++.++.+.+||++++
T Consensus 171 l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 171 LKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp HHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC--
T ss_pred HHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhcC
Confidence 732 578999999999998865443 346778899999998865
No 63
>PRK11460 putative hydrolase; Provisional
Probab=99.88 E-value=3.8e-21 Score=153.20 Aligned_cols=186 Identities=19% Similarity=0.189 Sum_probs=131.3
Q ss_pred CCCCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCc----------c---ccchhhHHHHHHH
Q 018375 37 PFSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARC----------Y---IKKFENIVNDCDD 103 (357)
Q Consensus 37 p~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~----------~---~~~~~~~~~d~~~ 103 (357)
|...+.|+||++||++++...| ..+++.|.+.++.+..++.+|...+..... . ...+....+.+.+
T Consensus 11 ~~~~~~~~vIlLHG~G~~~~~~-~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~ 89 (232)
T PRK11460 11 PDKPAQQLLLLFHGVGDNPVAM-GEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIE 89 (232)
T ss_pred CCCCCCcEEEEEeCCCCChHHH-HHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHH
Confidence 4556678999999999997777 789999987765555555555432211000 0 0012233445556
Q ss_pred HHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHHHHHhhcccCcccCc
Q 018375 104 FFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTRVEEIIPKWKIVPT 183 (357)
Q Consensus 104 ~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (357)
+++++..+.+.+.++++++|+|+||.+++.++..+|+.+.+++.+++..... .
T Consensus 90 ~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~~--------------------------~- 142 (232)
T PRK11460 90 TVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYASL--------------------------P- 142 (232)
T ss_pred HHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccccc--------------------------c-
Confidence 6666655555567899999999999999999999998888787776532100 0
Q ss_pred cccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCCccCChHHHHHHHHHccC-
Q 018375 184 KDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYERASS- 262 (357)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~- 262 (357)
.....++|++++||++|.++|.+.++++.+.+..
T Consensus 143 ---------------------------------------------~~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~ 177 (232)
T PRK11460 143 ---------------------------------------------ETAPTATTIHLIHGGEDPVIDVAHAVAAQEALISL 177 (232)
T ss_pred ---------------------------------------------ccccCCCcEEEEecCCCCccCHHHHHHHHHHHHHC
Confidence 0011357999999999999999999988887764
Q ss_pred -CCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHHhccc
Q 018375 263 -RDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDERMSD 303 (357)
Q Consensus 263 -~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~~~ 303 (357)
.++++++++++||.+. .+ ..+.+.+||.+.+..
T Consensus 178 g~~~~~~~~~~~gH~i~----~~----~~~~~~~~l~~~l~~ 211 (232)
T PRK11460 178 GGDVTLDIVEDLGHAID----PR----LMQFALDRLRYTVPK 211 (232)
T ss_pred CCCeEEEEECCCCCCCC----HH----HHHHHHHHHHHHcch
Confidence 4578899999999985 33 677888888887754
No 64
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.88 E-value=1.5e-22 Score=163.02 Aligned_cols=212 Identities=20% Similarity=0.227 Sum_probs=129.9
Q ss_pred cEEEEeCCCCCccCCC---CCccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEE
Q 018375 71 YAVFGIDYEGHGRSRG---ARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVL 147 (357)
Q Consensus 71 ~~vi~~d~~G~G~s~~---~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl 147 (357)
|+|+++|+||+|.|++ .....++.++.++++..+++.+ +.++++++||||||.+++.+++.+|++|+++|+
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl 74 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREAL------GIKKINLVGHSMGGMLALEYAAQYPERVKKLVL 74 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHH------TTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEE
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHh------CCCCeEEEEECCChHHHHHHHHHCchhhcCcEE
Confidence 7899999999999996 4445568889999999999988 788899999999999999999999999999999
Q ss_pred ecccc----ccccccCCh-hHHHHHHHHHHh----hccc-CcccC-ccccchhhccChhHHHHHhhcccccCCccchHHH
Q 018375 148 VAPMC----KISEKVKPH-PVLVNILTRVEE----IIPK-WKIVP-TKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTA 216 (357)
Q Consensus 148 ~~~~~----~~~~~~~~~-~~~~~~~~~~~~----~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (357)
+++.. ......... ............ .... ..... ..................................
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (230)
T PF00561_consen 75 ISPPPDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNM 154 (230)
T ss_dssp ESESSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHH
T ss_pred EeeeccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhhh
Confidence 99962 111000000 000000000000 0000 00000 0000000000000000000000000000000000
Q ss_pred ---HHHHHhhhhHhhccCCccccEEEEeeCCCccCChHHHHHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHH
Q 018375 217 ---LEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDI 293 (357)
Q Consensus 217 ---~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i 293 (357)
........+....+.++++|+|+++|++|.++|+.....+.+.++ +.++++++++||+.+++.|++ +.+.|
T Consensus 155 ~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~--~~~~~~~~~~GH~~~~~~~~~----~~~~i 228 (230)
T PF00561_consen 155 FWNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIP--NSQLVLIEGSGHFAFLEGPDE----FNEII 228 (230)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHST--TEEEEEETTCCSTHHHHSHHH----HHHHH
T ss_pred ccccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcC--CCEEEECCCCChHHHhcCHHh----hhhhh
Confidence 111222234455678899999999999999999999999888884 799999999999999999988 66555
Q ss_pred H
Q 018375 294 I 294 (357)
Q Consensus 294 ~ 294 (357)
.
T Consensus 229 ~ 229 (230)
T PF00561_consen 229 I 229 (230)
T ss_dssp H
T ss_pred c
Confidence 3
No 65
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.88 E-value=1.8e-20 Score=154.07 Aligned_cols=283 Identities=14% Similarity=0.133 Sum_probs=174.7
Q ss_pred CCccceeeeeEEecCCcEEEEEEEcCC-------CCCceEEEEEccCCcc-ccccHHHHHHHHhhCCcEEEEeCCCCCcc
Q 018375 12 KTVVEYQEEYIRNARGVQLFTCRWLPF-------STPKAVVFLCHGYGME-CSGFMRECGTRLASAGYAVFGIDYEGHGR 83 (357)
Q Consensus 12 ~~~~~~~~~~~~~~~g~~l~~~~~~p~-------~~~~p~vv~lHG~~~~-~~~~~~~~~~~l~~~G~~vi~~d~~G~G~ 83 (357)
...+.+++..+..+||..+...+..+. ....|+||++||+.++ .+.|...++..+.++||+|++++.||+|.
T Consensus 88 ~p~~~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g 167 (409)
T KOG1838|consen 88 KPPVEYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGG 167 (409)
T ss_pred CCCCcceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCC
Confidence 345678889999999999999988652 2467999999998654 44677889999999999999999999999
Q ss_pred CCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCC---cccEEEEecccccc--cccc
Q 018375 84 SRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPS---FWNGAVLVAPMCKI--SEKV 158 (357)
Q Consensus 84 s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~---~v~~~vl~~~~~~~--~~~~ 158 (357)
+.-.....++ ..+.+|+.+++++++ ..++..++..+|.||||.+.+.+..+..+ .+.++++++|+-.. ....
T Consensus 168 ~~LtTpr~f~-ag~t~Dl~~~v~~i~--~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~ 244 (409)
T KOG1838|consen 168 SKLTTPRLFT-AGWTEDLREVVNHIK--KRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSI 244 (409)
T ss_pred CccCCCceee-cCCHHHHHHHHHHHH--HhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHH
Confidence 9866554433 345689999999994 44577899999999999999999876443 35666666665432 1111
Q ss_pred ---CChhHHHHH-HHHHHhhcccCcc--cCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCC
Q 018375 159 ---KPHPVLVNI-LTRVEEIIPKWKI--VPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSK 232 (357)
Q Consensus 159 ---~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (357)
........+ ...+......... .......+........++.............. ..+ +....+....+.+
T Consensus 245 ~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~---~de-YY~~aSs~~~v~~ 320 (409)
T KOG1838|consen 245 ETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKS---VDE-YYKKASSSNYVDK 320 (409)
T ss_pred hcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCc---HHH-HHhhcchhhhccc
Confidence 011111111 1111111111000 00000111111111222222211111112221 122 2223455678899
Q ss_pred ccccEEEEeeCCCccCChHHHHHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHH-HHHHHHHhcc
Q 018375 233 VMIPFFVLHGEADTVTDPEVSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGD-IIAWLDERMS 302 (357)
Q Consensus 233 i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~-i~~fl~~~~~ 302 (357)
|++|+|+|++.+|+++|... .-..+...++++-+++-..+||..++|.-........+. +.+|+....-
T Consensus 321 I~VP~L~ina~DDPv~p~~~-ip~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~~~ 390 (409)
T KOG1838|consen 321 IKVPLLCINAADDPVVPEEA-IPIDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNAIF 390 (409)
T ss_pred ccccEEEEecCCCCCCCccc-CCHHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHHHh
Confidence 99999999999999999753 222333344688888889999999987732122224444 7777766543
No 66
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.88 E-value=1.6e-21 Score=154.50 Aligned_cols=202 Identities=20% Similarity=0.244 Sum_probs=136.3
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCccCCCCC---ccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHh
Q 018375 60 RECGTRLASAGYAVFGIDYEGHGRSRGAR---CYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHK 136 (357)
Q Consensus 60 ~~~~~~l~~~G~~vi~~d~~G~G~s~~~~---~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~ 136 (357)
....+.|+++||.|+.+|+||.+...... .....-...++|+.++++++.++..++.+++.++|+|+||++++.++.
T Consensus 4 ~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~ 83 (213)
T PF00326_consen 4 NWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAAT 83 (213)
T ss_dssp SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHH
T ss_pred eHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhc
Confidence 45678899999999999999977432210 111123456889999999998877778899999999999999999999
Q ss_pred cCCCcccEEEEeccccccccccCChhHHHHHHHHHHhhcccCcccCccccchhhccChhHHHHHhhcccccCCccchHHH
Q 018375 137 KDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTRVEEIIPKWKIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTA 216 (357)
Q Consensus 137 ~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (357)
++|+++++++..+|..+.......... +. ............ ....
T Consensus 84 ~~~~~f~a~v~~~g~~d~~~~~~~~~~---~~----------------------------~~~~~~~~~~~~----~~~~ 128 (213)
T PF00326_consen 84 QHPDRFKAAVAGAGVSDLFSYYGTTDI---YT----------------------------KAEYLEYGDPWD----NPEF 128 (213)
T ss_dssp HTCCGSSEEEEESE-SSTTCSBHHTCC---HH----------------------------HGHHHHHSSTTT----SHHH
T ss_pred ccceeeeeeeccceecchhcccccccc---cc----------------------------cccccccCccch----hhhh
Confidence 999999999999998765433211000 00 000000000000 0000
Q ss_pred HHHHHhhhhHhhccCC--ccccEEEEeeCCCccCChHHHHHHHHHccC--CCceEEEcCCCCcccccCCCChhhhhHHHH
Q 018375 217 LEMLRTSMSLEDSLSK--VMIPFFVLHGEADTVTDPEVSKALYERASS--RDKTIKLYPGMWHALTSGEPDENIDIVFGD 292 (357)
Q Consensus 217 ~~~~~~~~~~~~~~~~--i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~ 292 (357)
... ......+.+ +++|+|+++|++|..||++++..+++.+.. .+++++++|++||.+.. ++ ......+.
T Consensus 129 ~~~----~s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~--~~-~~~~~~~~ 201 (213)
T PF00326_consen 129 YRE----LSPISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGN--PE-NRRDWYER 201 (213)
T ss_dssp HHH----HHHGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTS--HH-HHHHHHHH
T ss_pred hhh----hccccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCC--ch-hHHHHHHH
Confidence 000 112223344 889999999999999999999999888765 45899999999996542 33 34468999
Q ss_pred HHHHHHHhccc
Q 018375 293 IIAWLDERMSD 303 (357)
Q Consensus 293 i~~fl~~~~~~ 303 (357)
+.+||+++++.
T Consensus 202 ~~~f~~~~l~~ 212 (213)
T PF00326_consen 202 ILDFFDKYLKK 212 (213)
T ss_dssp HHHHHHHHTT-
T ss_pred HHHHHHHHcCC
Confidence 99999999864
No 67
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.88 E-value=7.7e-21 Score=139.95 Aligned_cols=242 Identities=19% Similarity=0.311 Sum_probs=156.6
Q ss_pred eeeeeEEecCCcEEEEEEEcCCCCCceEEEEEccCCcccc-ccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchh
Q 018375 17 YQEEYIRNARGVQLFTCRWLPFSTPKAVVFLCHGYGMECS-GFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFE 95 (357)
Q Consensus 17 ~~~~~~~~~~g~~l~~~~~~p~~~~~p~vv~lHG~~~~~~-~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~ 95 (357)
.+...+..+.+.++..... ..++..++|++||+-++.. .++..++..|.+.|+.++.+|++|.|+|.+...+. .+.
T Consensus 10 ~~~ivi~n~~ne~lvg~lh--~tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~G-n~~ 86 (269)
T KOG4667|consen 10 AQKIVIPNSRNEKLVGLLH--ETGSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYG-NYN 86 (269)
T ss_pred eeEEEeccCCCchhhccee--ccCCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccC-ccc
Confidence 3445566666666655443 3456778999999988755 45578899999999999999999999999876542 566
Q ss_pred hHHHHHHHHHHHHHhhhccCCcc--EEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHHHHHh
Q 018375 96 NIVNDCDDFFKSVCAQEEYTDKA--RFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTRVEE 173 (357)
Q Consensus 96 ~~~~d~~~~l~~l~~~~~~~~~~--v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (357)
..++|+..+++++.. ..+ -+++|||-||.+++.+|.++++ +.-+|.+++-.+...... .......+.....
T Consensus 87 ~eadDL~sV~q~~s~-----~nr~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I~-eRlg~~~l~~ike 159 (269)
T KOG4667|consen 87 TEADDLHSVIQYFSN-----SNRVVPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGIN-ERLGEDYLERIKE 159 (269)
T ss_pred chHHHHHHHHHHhcc-----CceEEEEEEeecCccHHHHHHHHhhcC-chheEEcccccchhcchh-hhhcccHHHHHHh
Confidence 678999999999953 233 3489999999999999999987 788888877654332210 0000000000000
Q ss_pred hcccCcccCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCc--cccEEEEeeCCCccCChH
Q 018375 174 IIPKWKIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKV--MIPFFVLHGEADTVTDPE 251 (357)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~Pvl~i~g~~D~~~~~~ 251 (357)
-..+...+.+. .+... +.....+.+...+..+...+| +||||-+||..|.+||.+
T Consensus 160 -~Gfid~~~rkG--------------------~y~~r--vt~eSlmdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve 216 (269)
T KOG4667|consen 160 -QGFIDVGPRKG--------------------KYGYR--VTEESLMDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVE 216 (269)
T ss_pred -CCceecCcccC--------------------CcCce--ecHHHHHHHHhchhhhhhcCcCccCceEEEeccCCceeech
Confidence 00000000000 00000 000111111222333433444 899999999999999999
Q ss_pred HHHHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHH
Q 018375 252 VSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLD 298 (357)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~ 298 (357)
.+.++++.++ +.++.++||++|.+...+.+ .......|..
T Consensus 217 ~AkefAk~i~--nH~L~iIEgADHnyt~~q~~-----l~~lgl~f~k 256 (269)
T KOG4667|consen 217 DAKEFAKIIP--NHKLEIIEGADHNYTGHQSQ-----LVSLGLEFIK 256 (269)
T ss_pred hHHHHHHhcc--CCceEEecCCCcCccchhhh-----HhhhcceeEE
Confidence 9999999995 69999999999998743322 4555555544
No 68
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.88 E-value=1.6e-20 Score=154.95 Aligned_cols=250 Identities=20% Similarity=0.214 Sum_probs=157.6
Q ss_pred CCCCccceeeeeEEecCCcEEEEEEEcCC--CCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCC
Q 018375 10 NNKTVVEYQEEYIRNARGVQLFTCRWLPF--STPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGA 87 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~~~g~~l~~~~~~p~--~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~ 87 (357)
.....+.+.++.|.+.+|.+|+.+++.|. .++.|+||.+||.++....+... ..++..||.|+.+|.||.|.....
T Consensus 49 ~~~~~~~vy~v~f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~--~~~a~~G~~vl~~d~rGqg~~~~d 126 (320)
T PF05448_consen 49 FPTPGVEVYDVSFESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDL--LPWAAAGYAVLAMDVRGQGGRSPD 126 (320)
T ss_dssp -SBSSEEEEEEEEEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHH--HHHHHTT-EEEEE--TTTSSSS-B
T ss_pred cCCCCEEEEEEEEEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCcccc--cccccCCeEEEEecCCCCCCCCCC
Confidence 34456788899999999999999999995 56789999999999886666333 247789999999999999832210
Q ss_pred ---------Cc----------cccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEe
Q 018375 88 ---------RC----------YIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLV 148 (357)
Q Consensus 88 ---------~~----------~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~ 148 (357)
.+ ..+-+.....|+..+++.+..+..++.++|.+.|.|.||.+++.+|+..+ +|++++..
T Consensus 127 ~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~ 205 (320)
T PF05448_consen 127 YRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAAD 205 (320)
T ss_dssp -SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEE
T ss_pred ccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEec
Confidence 00 01113346689999999999888888999999999999999999999886 59999999
Q ss_pred ccccccccccCChhHHHHHHHHHHhhcccCcccCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhh
Q 018375 149 APMCKISEKVKPHPVLVNILTRVEEIIPKWKIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLED 228 (357)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (357)
.|........ + ....... + -.+.......... .........+. ....|...
T Consensus 206 vP~l~d~~~~---------~---~~~~~~~---~----------y~~~~~~~~~~d~---~~~~~~~v~~~-L~Y~D~~n 256 (320)
T PF05448_consen 206 VPFLCDFRRA---------L---ELRADEG---P----------YPEIRRYFRWRDP---HHEREPEVFET-LSYFDAVN 256 (320)
T ss_dssp SESSSSHHHH---------H---HHT--ST---T----------THHHHHHHHHHSC---THCHHHHHHHH-HHTT-HHH
T ss_pred CCCccchhhh---------h---hcCCccc---c----------HHHHHHHHhccCC---CcccHHHHHHH-HhhhhHHH
Confidence 8865422100 0 0000000 0 0000000000000 00001111111 12245666
Q ss_pred ccCCccccEEEEeeCCCccCChHHHHHHHHHccCCCceEEEcCCCCcccccCCCChhhhhH-HHHHHHHHHHh
Q 018375 229 SLSKVMIPFFVLHGEADTVTDPEVSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIV-FGDIIAWLDER 300 (357)
Q Consensus 229 ~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~-~~~i~~fl~~~ 300 (357)
...+|++|+++..|-.|.++|+...-..+..+.. .+++.++|..||... .. + .+...+||.++
T Consensus 257 fA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~-~K~l~vyp~~~He~~----~~----~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 257 FARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPG-PKELVVYPEYGHEYG----PE----FQEDKQLNFLKEH 320 (320)
T ss_dssp HGGG--SEEEEEEETT-SSS-HHHHHHHHCC--S-SEEEEEETT--SSTT----HH----HHHHHHHHHHHH-
T ss_pred HHHHcCCCEEEEEecCCCCCCchhHHHHHhccCC-CeeEEeccCcCCCch----hh----HHHHHHHHHHhcC
Confidence 7788999999999999999999999999999986 799999999999764 22 4 78899999864
No 69
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.87 E-value=4.7e-20 Score=151.38 Aligned_cols=225 Identities=18% Similarity=0.195 Sum_probs=136.1
Q ss_pred EecCCcEEEEEEEcCC---CCCceEEEEEccCCccccccHH--HHHHHHhhCCcEEEEeCC--CCCccCCCCC-------
Q 018375 23 RNARGVQLFTCRWLPF---STPKAVVFLCHGYGMECSGFMR--ECGTRLASAGYAVFGIDY--EGHGRSRGAR------- 88 (357)
Q Consensus 23 ~~~~g~~l~~~~~~p~---~~~~p~vv~lHG~~~~~~~~~~--~~~~~l~~~G~~vi~~d~--~G~G~s~~~~------- 88 (357)
...-+..+.|.+|.|. ..+.|+||++||++++...|.. .+...+.+.|+.|+++|. +|+|.+....
T Consensus 20 s~~~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~ 99 (275)
T TIGR02821 20 SETCGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKG 99 (275)
T ss_pred ccccCCceEEEEEcCCCccCCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCC
Confidence 3345778889999994 4567999999999988776622 222333456999999998 5554332100
Q ss_pred ------------ccccchh-hHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccc
Q 018375 89 ------------CYIKKFE-NIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKIS 155 (357)
Q Consensus 89 ------------~~~~~~~-~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~ 155 (357)
...+.+. ..++++..+++.. ...+.++++++||||||.+|+.++.++|+.++++++++|.....
T Consensus 100 ~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~ 176 (275)
T TIGR02821 100 AGFYVDATEEPWSQHYRMYSYIVQELPALVAAQ---FPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVAPS 176 (275)
T ss_pred ccccccCCcCcccccchHHHHHHHHHHHHHHhh---CCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccCcc
Confidence 0001112 2234555444432 23356789999999999999999999999999999999886532
Q ss_pred cccCChhHHHHHHHHHHhhcccCcccCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccc
Q 018375 156 EKVKPHPVLVNILTRVEEIIPKWKIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMI 235 (357)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 235 (357)
... .. .. .+... +.. .... ... . ......... ....
T Consensus 177 ~~~---~~-~~---~~~~~----------------l~~---------~~~~------~~~-~----~~~~~~~~~-~~~~ 212 (275)
T TIGR02821 177 RCP---WG-QK---AFSAY----------------LGA---------DEAA------WRS-Y----DASLLVADG-GRHS 212 (275)
T ss_pred cCc---ch-HH---HHHHH----------------hcc---------cccc------hhh-c----chHHHHhhc-ccCC
Confidence 110 00 00 00000 000 0000 000 0 000111111 2467
Q ss_pred cEEEEeeCCCccCCh-HHHHHHHHHccC--CCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHHh
Q 018375 236 PFFVLHGEADTVTDP-EVSKALYERASS--RDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDER 300 (357)
Q Consensus 236 Pvl~i~g~~D~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~ 300 (357)
|+++++|+.|..++. .....+.+.+.. .++++.++||++|.+.. +..+....++|..++
T Consensus 213 plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~g~~H~f~~------~~~~~~~~~~~~~~~ 274 (275)
T TIGR02821 213 TILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQAGYDHSYYF------IASFIADHLRHHAER 274 (275)
T ss_pred CeeEeecCCCcccCccccHHHHHHHHHHcCCCeEEEEeCCCCccchh------HHHhHHHHHHHHHhh
Confidence 999999999999998 455555555443 46899999999999873 333666666666543
No 70
>PLN02442 S-formylglutathione hydrolase
Probab=99.87 E-value=5.5e-20 Score=151.16 Aligned_cols=212 Identities=17% Similarity=0.257 Sum_probs=131.8
Q ss_pred EEecCCcEEEEEEEcCC---CCCceEEEEEccCCccccccH--HHHHHHHhhCCcEEEEeCCCCCcc-----CCC-----
Q 018375 22 IRNARGVQLFTCRWLPF---STPKAVVFLCHGYGMECSGFM--RECGTRLASAGYAVFGIDYEGHGR-----SRG----- 86 (357)
Q Consensus 22 ~~~~~g~~l~~~~~~p~---~~~~p~vv~lHG~~~~~~~~~--~~~~~~l~~~G~~vi~~d~~G~G~-----s~~----- 86 (357)
....-|..+.|.+|.|. +.+.|+|+|+||++++...|. ..+...+...|+.|+.+|..++|. +..
T Consensus 24 ~s~~l~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~ 103 (283)
T PLN02442 24 FSSTLGCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGV 103 (283)
T ss_pred eccccCCceEEEEEcCCcccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCC
Confidence 34456789999999994 456899999999988765552 234466677799999999887661 110
Q ss_pred CCc-c----c-----cc-hhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccc
Q 018375 87 ARC-Y----I-----KK-FENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKIS 155 (357)
Q Consensus 87 ~~~-~----~-----~~-~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~ 155 (357)
... + . .. .....+++..+++.... ..+.++++|+||||||..|+.++.++|+++++++.++|..+..
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~--~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~ 181 (283)
T PLN02442 104 GAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFD--QLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANPI 181 (283)
T ss_pred CcceeeccccCCCcccchhhhHHHHHHHHHHHHHH--hcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCcc
Confidence 000 0 0 01 12233455545544322 2267889999999999999999999999999999999986532
Q ss_pred cccCChhHHHHHHHHHHhhcccCcccCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccc
Q 018375 156 EKVKPHPVLVNILTRVEEIIPKWKIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMI 235 (357)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 235 (357)
..... .. .+...+ .... ..+. .+ ........+...++
T Consensus 182 ~~~~~---~~----~~~~~~----------------g~~~--~~~~-----------------~~-d~~~~~~~~~~~~~ 218 (283)
T PLN02442 182 NCPWG---QK----AFTNYL----------------GSDK--ADWE-----------------EY-DATELVSKFNDVSA 218 (283)
T ss_pred cCchh---hH----HHHHHc----------------CCCh--hhHH-----------------Hc-ChhhhhhhccccCC
Confidence 11100 00 000000 0000 0000 00 00122233455689
Q ss_pred cEEEEeeCCCccCChH-HHHHHHHHccC--CCceEEEcCCCCcccc
Q 018375 236 PFFVLHGEADTVTDPE-VSKALYERASS--RDKTIKLYPGMWHALT 278 (357)
Q Consensus 236 Pvl~i~g~~D~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~gH~~~ 278 (357)
|+++++|++|.+++.. .++.+.+.+.. .++++.++|+.+|.+.
T Consensus 219 pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 219 TILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHSYF 264 (283)
T ss_pred CEEEEECCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCccHH
Confidence 9999999999998863 24444444332 4689999999999876
No 71
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.86 E-value=2.9e-20 Score=162.26 Aligned_cols=246 Identities=12% Similarity=0.099 Sum_probs=145.2
Q ss_pred EEEEEEEcCCC--CCceEEEEEccCCccccccH----HHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHH-HH
Q 018375 29 QLFTCRWLPFS--TPKAVVFLCHGYGMECSGFM----RECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVN-DC 101 (357)
Q Consensus 29 ~l~~~~~~p~~--~~~p~vv~lHG~~~~~~~~~----~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~-d~ 101 (357)
.+....|.|.. ..+++||++||+......+. +.++..|.++||+|+++|++|+|.+.... ++++++. ++
T Consensus 173 ~~eLi~Y~P~t~~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~----~~ddY~~~~i 248 (532)
T TIGR01838 173 LFQLIQYEPTTETVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADK----TFDDYIRDGV 248 (532)
T ss_pred cEEEEEeCCCCCcCCCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccC----ChhhhHHHHH
Confidence 44555667732 24678999999976655441 37999999999999999999999886543 3445553 46
Q ss_pred HHHHHHHHhhhccCCccEEEEEeChhHHHHH----HHHhcC-CCcccEEEEeccccccccccCChhHH-HHHHHHHHhhc
Q 018375 102 DDFFKSVCAQEEYTDKARFLYGESMGGAVTL----LLHKKD-PSFWNGAVLVAPMCKISEKVKPHPVL-VNILTRVEEII 175 (357)
Q Consensus 102 ~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~----~~a~~~-p~~v~~~vl~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 175 (357)
.++++.+.+.. +.++++++||||||.++. .+++.. +++|++++++++..++........+. ......+....
T Consensus 249 ~~al~~v~~~~--g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~ 326 (532)
T TIGR01838 249 IAALEVVEAIT--GEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQN 326 (532)
T ss_pred HHHHHHHHHhc--CCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHH
Confidence 66666664322 678999999999999852 244554 77899999999988766432111110 00011111111
Q ss_pred ccCcccCccccc-------------h----hhccChhH----HHHHhhcccccCCccchHHHH-HHHHhh---------h
Q 018375 176 PKWKIVPTKDVI-------------D----SAFKDSIK----REEIRNNKLIYQDKPRLKTAL-EMLRTS---------M 224 (357)
Q Consensus 176 ~~~~~~~~~~~~-------------~----~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~---------~ 224 (357)
......+...+. . .++..... ...+..+...+.. ......+ ..+... .
T Consensus 327 ~~~G~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~-~~~~~~lr~ly~~N~L~~G~~~v~ 405 (532)
T TIGR01838 327 GGGGYLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPG-KMHNFYLRNLYLQNALTTGGLEVC 405 (532)
T ss_pred HhcCCCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchH-HHHHHHHHHHHhcCCCcCCeeEEC
Confidence 111111111000 0 00000000 0000000000000 0011111 111111 1
Q ss_pred hHhhccCCccccEEEEeeCCCccCChHHHHHHHHHccCCCceEEEcCCCCcccccCCCC
Q 018375 225 SLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYERASSRDKTIKLYPGMWHALTSGEPD 283 (357)
Q Consensus 225 ~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~ 283 (357)
.....+.+|++|+|++.|++|.++|++.+..+.+.+. +.+..+++++||..++++|.
T Consensus 406 g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~--~~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 406 GVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALLG--GPKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred CEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCC--CCEEEEECCCCCchHhhCCC
Confidence 1234678899999999999999999999999888885 67888999999999987765
No 72
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.86 E-value=1.4e-20 Score=150.88 Aligned_cols=126 Identities=21% Similarity=0.262 Sum_probs=101.0
Q ss_pred ecCCcEEEEEEEcCC-CCCceEEEEEccCCccccc---cHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHH
Q 018375 24 NARGVQLFTCRWLPF-STPKAVVFLCHGYGMECSG---FMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVN 99 (357)
Q Consensus 24 ~~~g~~l~~~~~~p~-~~~~p~vv~lHG~~~~~~~---~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~ 99 (357)
+.....+.+..+.|. .+++++|||+||++..... .+..+++.|+++||.|+++|+||||.|.+.... .+++.+++
T Consensus 6 ~~~~g~~~~~~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~-~~~~~~~~ 84 (266)
T TIGR03101 6 DAPHGFRFCLYHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAA-ARWDVWKE 84 (266)
T ss_pred cCCCCcEEEEEecCCCCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcccc-CCHHHHHH
Confidence 334445666677663 3456899999999864322 236778999999999999999999999765432 37788999
Q ss_pred HHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccc
Q 018375 100 DCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCK 153 (357)
Q Consensus 100 d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 153 (357)
|+..+++++... +..+++|+||||||.+++.++.++|+.++++|+++|...
T Consensus 85 Dv~~ai~~L~~~---~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 85 DVAAAYRWLIEQ---GHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVS 135 (266)
T ss_pred HHHHHHHHHHhc---CCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccc
Confidence 999999888543 467899999999999999999999999999999998765
No 73
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.86 E-value=1.7e-20 Score=143.77 Aligned_cols=249 Identities=16% Similarity=0.225 Sum_probs=151.9
Q ss_pred EEEEEEEcCCCCCceEEEEEccCCccccccHHHHHHHHhhC-CcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHH
Q 018375 29 QLFTCRWLPFSTPKAVVFLCHGYGMECSGFMRECGTRLASA-GYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKS 107 (357)
Q Consensus 29 ~l~~~~~~p~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~-G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~ 107 (357)
++..+...|.....|+++++||.|.+.-.| ..++..+... ..+|+++|+||||++.-......+.+.++.|+.++++.
T Consensus 61 t~n~Y~t~~~~t~gpil~l~HG~G~S~LSf-A~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~ 139 (343)
T KOG2564|consen 61 TFNVYLTLPSATEGPILLLLHGGGSSALSF-AIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKE 139 (343)
T ss_pred eEEEEEecCCCCCccEEEEeecCcccchhH-HHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHH
Confidence 455555555566789999999999887777 8888888765 46778899999999988777667999999999999999
Q ss_pred HHhhhccCCccEEEEEeChhHHHHHHHHh--cCCCcccEEEEeccccccccccCChhHHHHHHHHHHhhcccCcc--cCc
Q 018375 108 VCAQEEYTDKARFLYGESMGGAVTLLLHK--KDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTRVEEIIPKWKI--VPT 183 (357)
Q Consensus 108 l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~--~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 183 (357)
+... ...+|+||||||||.+|...|. ..|. +.++++++-+-.. ....+..+..++..... ...
T Consensus 140 ~fge---~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVVEgt---------AmeAL~~m~~fL~~rP~~F~Si 206 (343)
T KOG2564|consen 140 LFGE---LPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVVEGT---------AMEALNSMQHFLRNRPKSFKSI 206 (343)
T ss_pred Hhcc---CCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEEechH---------HHHHHHHHHHHHhcCCccccch
Confidence 8532 4678999999999999988875 3465 8888888754211 01111111111111000 000
Q ss_pred cccchhhcc-------------ChhHHHHHhhcccccCCccchHHHHHHHHhh-hhHhhccCCccccEEEEeeCCCccCC
Q 018375 184 KDVIDSAFK-------------DSIKREEIRNNKLIYQDKPRLKTALEMLRTS-MSLEDSLSKVMIPFFVLHGEADTVTD 249 (357)
Q Consensus 184 ~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~Pvl~i~g~~D~~~~ 249 (357)
++.+.+... -+........ -..|..+..+.....+.... ..+...+-...+|-++|.+..|..-.
T Consensus 207 ~~Ai~W~v~sg~~Rn~~SArVsmP~~~~~~~e-Gh~yvwrtdL~kte~YW~gWF~gLS~~Fl~~p~~klLilAg~d~LDk 285 (343)
T KOG2564|consen 207 EDAIEWHVRSGQLRNRDSARVSMPSQLKQCEE-GHCYVWRTDLEKTEQYWKGWFKGLSDKFLGLPVPKLLILAGVDRLDK 285 (343)
T ss_pred hhHHHHHhccccccccccceEecchheeeccC-CCcEEEEeeccccchhHHHHHhhhhhHhhCCCccceeEEecccccCc
Confidence 000000000 0000000000 00111111122111111111 22333444567887888777775432
Q ss_pred hHHHHHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHHhc
Q 018375 250 PEVSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDERM 301 (357)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~ 301 (357)
.-. .-++. ...++.+++.+||+.+.+.|.. +...+..|+.++.
T Consensus 286 dLt----iGQMQ-Gk~Q~~vL~~~GH~v~ED~P~k----va~~~~~f~~Rn~ 328 (343)
T KOG2564|consen 286 DLT----IGQMQ-GKFQLQVLPLCGHFVHEDSPHK----VAECLCVFWIRNR 328 (343)
T ss_pred cee----eeeec-cceeeeeecccCceeccCCcch----HHHHHHHHHhhhc
Confidence 111 11223 3789999999999999999999 9999999998875
No 74
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.86 E-value=1.5e-19 Score=143.17 Aligned_cols=210 Identities=19% Similarity=0.207 Sum_probs=161.3
Q ss_pred eeEEecCCcEEEEEEEcCCCCC-ceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCC-ccCCCCC--c----c-
Q 018375 20 EYIRNARGVQLFTCRWLPFSTP-KAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGH-GRSRGAR--C----Y- 90 (357)
Q Consensus 20 ~~~~~~~g~~l~~~~~~p~~~~-~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~-G~s~~~~--~----~- 90 (357)
+.+...+ ..+..++..|.+.. .|.||++|++.+-.... +.+++.|+..||.|+++|+-+. |.+.... . .
T Consensus 5 v~~~~~~-~~~~~~~a~P~~~~~~P~VIv~hei~Gl~~~i-~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~ 82 (236)
T COG0412 5 VTIPAPD-GELPAYLARPAGAGGFPGVIVLHEIFGLNPHI-RDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETG 82 (236)
T ss_pred eEeeCCC-ceEeEEEecCCcCCCCCEEEEEecccCCchHH-HHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhh
Confidence 4454544 88999999994433 39999999998875554 8999999999999999998763 2222111 0 0
Q ss_pred ---ccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHH
Q 018375 91 ---IKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNI 167 (357)
Q Consensus 91 ---~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~ 167 (357)
..+..+...|+.+.+++|..+...+..+|.++|+||||.+++.++...| .+++.+..-+......
T Consensus 83 ~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~~----------- 150 (236)
T COG0412 83 LVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIADD----------- 150 (236)
T ss_pred hhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCCc-----------
Confidence 0123677889999999998776566789999999999999999999887 6898888776543110
Q ss_pred HHHHHhhcccCcccCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCCcc
Q 018375 168 LTRVEEIIPKWKIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTV 247 (357)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~ 247 (357)
.....++++|+|+++|+.|..
T Consensus 151 -----------------------------------------------------------~~~~~~~~~pvl~~~~~~D~~ 171 (236)
T COG0412 151 -----------------------------------------------------------TADAPKIKVPVLLHLAGEDPY 171 (236)
T ss_pred -----------------------------------------------------------ccccccccCcEEEEecccCCC
Confidence 112467899999999999999
Q ss_pred CChHHHHHHHHHccCC--CceEEEcCCCCcccccC-------CCChhhhhHHHHHHHHHHHhcc
Q 018375 248 TDPEVSKALYERASSR--DKTIKLYPGMWHALTSG-------EPDENIDIVFGDIIAWLDERMS 302 (357)
Q Consensus 248 ~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~-------~p~~~~~~~~~~i~~fl~~~~~ 302 (357)
+|......+.+.+... .+++.+|+++.|.+.-. ......+..++.+.+||++++.
T Consensus 172 ~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 172 IPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred CChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhcc
Confidence 9999888888877763 68899999999998843 2334567789999999998764
No 75
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.86 E-value=3.7e-20 Score=177.14 Aligned_cols=265 Identities=15% Similarity=0.190 Sum_probs=155.0
Q ss_pred EEEEEEcCCC------CCceEEEEEccCCccccccHHH-----HHHHHhhCCcEEEEeCCCCCccCCCCCc-cccchhhH
Q 018375 30 LFTCRWLPFS------TPKAVVFLCHGYGMECSGFMRE-----CGTRLASAGYAVFGIDYEGHGRSRGARC-YIKKFENI 97 (357)
Q Consensus 30 l~~~~~~p~~------~~~p~vv~lHG~~~~~~~~~~~-----~~~~l~~~G~~vi~~d~~G~G~s~~~~~-~~~~~~~~ 97 (357)
+..+.|.|.. ..+++|||+||++.+...| +. +...|.++||+|+++|+ |.++.+.. ...++.++
T Consensus 49 ~~l~~y~~~~~~~~~~~~~~plllvhg~~~~~~~~-d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~ 124 (994)
T PRK07868 49 YRLRRYFPPDNRPGQPPVGPPVLMVHPMMMSADMW-DVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLADH 124 (994)
T ss_pred EEEEEeCCCCccccccCCCCcEEEECCCCCCccce-ecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHHH
Confidence 3445566632 3568899999999887777 43 47899999999999994 55554432 12466667
Q ss_pred HHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcC-CCcccEEEEeccccccccccCCh---hHHHH---H-HH
Q 018375 98 VNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKD-PSFWNGAVLVAPMCKISEKVKPH---PVLVN---I-LT 169 (357)
Q Consensus 98 ~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~-p~~v~~~vl~~~~~~~~~~~~~~---~~~~~---~-~~ 169 (357)
+..+.++++.++.. ..++++++||||||.+++.+++.+ +++|+++|++++..++....... ..... + ..
T Consensus 125 i~~l~~~l~~v~~~---~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 201 (994)
T PRK07868 125 VVALSEAIDTVKDV---TGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMAD 201 (994)
T ss_pred HHHHHHHHHHHHHh---hCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchh
Confidence 66666666665433 346899999999999999998755 55899999998886653321100 00000 0 00
Q ss_pred HHHh--hcccCc-------ccC------ccccchhhccCh------hHHHHHhhccc-ccCCccchHHHHHHHHhh-hh-
Q 018375 170 RVEE--IIPKWK-------IVP------TKDVIDSAFKDS------IKREEIRNNKL-IYQDKPRLKTALEMLRTS-MS- 225 (357)
Q Consensus 170 ~~~~--~~~~~~-------~~~------~~~~~~~~~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~- 225 (357)
.+.. .++.+. ..+ ...+........ ........... .+.. .........+... ..
T Consensus 202 ~~~~~~~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g-~~~~~~~~~~~~~n~~~ 280 (994)
T PRK07868 202 HVFNRLDIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSG-PAISELLKQFIAHNRMM 280 (994)
T ss_pred hhhhcCCCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccch-HHHHHHHHHHHHhCccc
Confidence 0000 000000 000 000000000000 00011110000 0000 0111111111110 00
Q ss_pred -----H---hhccCCccccEEEEeeCCCccCChHHHHHHHHHccCCCceE-EEcCCCCcccccCCCChhhhhHHHHHHHH
Q 018375 226 -----L---EDSLSKVMIPFFVLHGEADTVTDPEVSKALYERASSRDKTI-KLYPGMWHALTSGEPDENIDIVFGDIIAW 296 (357)
Q Consensus 226 -----~---~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~-~~~~~~gH~~~~~~p~~~~~~~~~~i~~f 296 (357)
. ...+.+|++|+|+|+|++|.++|++.++.+.+.++ +.++ .+++++||+.++-... ..++++..|.+|
T Consensus 281 ~g~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~--~a~~~~~~~~~GH~g~~~g~~-a~~~~wp~i~~w 357 (994)
T PRK07868 281 TGGFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAAP--NAEVYESLIRAGHFGLVVGSR-AAQQTWPTVADW 357 (994)
T ss_pred CceEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCC--CCeEEEEeCCCCCEeeeechh-hhhhhChHHHHH
Confidence 1 12478899999999999999999999999988884 6776 6779999998764333 245599999999
Q ss_pred HHHhccccc
Q 018375 297 LDERMSDAN 305 (357)
Q Consensus 297 l~~~~~~~~ 305 (357)
|.++.....
T Consensus 358 l~~~~~~~~ 366 (994)
T PRK07868 358 VKWLEGDGD 366 (994)
T ss_pred HHHhccCCC
Confidence 999886644
No 76
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.85 E-value=1e-19 Score=150.91 Aligned_cols=240 Identities=18% Similarity=0.195 Sum_probs=142.5
Q ss_pred cceeeeeEEecCCcEEEEEEEcC-CCCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccc
Q 018375 15 VEYQEEYIRNARGVQLFTCRWLP-FSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKK 93 (357)
Q Consensus 15 ~~~~~~~~~~~~g~~l~~~~~~p-~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~ 93 (357)
..+++..|.. .|.+|.+++..| .+++.|+||++.|+-+-...++..+.++|+.+|+.++++|.||.|.|...+-. .+
T Consensus 163 ~~i~~v~iP~-eg~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~-~D 240 (411)
T PF06500_consen 163 YPIEEVEIPF-EGKTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLT-QD 240 (411)
T ss_dssp SEEEEEEEEE-TTCEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S--S-
T ss_pred CCcEEEEEee-CCcEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCC-cC
Confidence 4466677766 458898888888 55677888888888777767656666789999999999999999998643211 12
Q ss_pred hhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEecccccccccc--CChhHHHHHHHHH
Q 018375 94 FENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKV--KPHPVLVNILTRV 171 (357)
Q Consensus 94 ~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~--~~~~~~~~~~~~~ 171 (357)
.+.+ ..++++++.....++..+|.++|.|+||++|.++|..++++++++|.+++++...-.. ........+...+
T Consensus 241 ~~~l---~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~~~~~~~P~my~d~L 317 (411)
T PF06500_consen 241 SSRL---HQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDPEWQQRVPDMYLDVL 317 (411)
T ss_dssp CCHH---HHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-HHHHTTS-HHHHHHH
T ss_pred HHHH---HHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccHHHHhcCCHHHHHHH
Confidence 2333 4466777777777788999999999999999999998889999999999975422110 0000000000111
Q ss_pred HhhcccCcccCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhH--hhcc--CCccccEEEEeeCCCcc
Q 018375 172 EEIIPKWKIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSL--EDSL--SKVMIPFFVLHGEADTV 247 (357)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~i~~Pvl~i~g~~D~~ 247 (357)
...+.. .. .........+. ...+ ...+ .+..+|+|.+.+++|++
T Consensus 318 A~rlG~------------------------------~~-~~~~~l~~el~-~~SLk~qGlL~~rr~~~plL~i~~~~D~v 365 (411)
T PF06500_consen 318 ASRLGM------------------------------AA-VSDESLRGELN-KFSLKTQGLLSGRRCPTPLLAINGEDDPV 365 (411)
T ss_dssp HHHCT-------------------------------SC-E-HHHHHHHGG-GGSTTTTTTTTSS-BSS-EEEEEETT-SS
T ss_pred HHHhCC------------------------------cc-CCHHHHHHHHH-hcCcchhccccCCCCCcceEEeecCCCCC
Confidence 111000 00 00000000100 1111 1123 66789999999999999
Q ss_pred CChHHHHHHHHHccCCCceEEEcCCCC-cccccCCCChhhhhHHHHHHHHHHHhc
Q 018375 248 TDPEVSKALYERASSRDKTIKLYPGMW-HALTSGEPDENIDIVFGDIIAWLDERM 301 (357)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~g-H~~~~~~p~~~~~~~~~~i~~fl~~~~ 301 (357)
+|.+..+-++..-. +.+...++... |..+ .+....+.+||++.+
T Consensus 366 ~P~eD~~lia~~s~--~gk~~~~~~~~~~~gy--------~~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 366 SPIEDSRLIAESST--DGKALRIPSKPLHMGY--------PQALDEIYKWLEDKL 410 (411)
T ss_dssp S-HHHHHHHHHTBT--T-EEEEE-SSSHHHHH--------HHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHhcCC--CCceeecCCCccccch--------HHHHHHHHHHHHHhc
Confidence 99999888776653 56777777544 4433 237899999998764
No 77
>PLN00021 chlorophyllase
Probab=99.84 E-value=4.4e-19 Score=146.35 Aligned_cols=209 Identities=14% Similarity=0.144 Sum_probs=141.5
Q ss_pred cEEEEEEEcC-CCCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHH
Q 018375 28 VQLFTCRWLP-FSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFK 106 (357)
Q Consensus 28 ~~l~~~~~~p-~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~ 106 (357)
..+.+.++.| ..+..|+|||+||++.+...| ..+++.|+++||.|+++|++|++.+.. ....+|..++++
T Consensus 37 ~~~p~~v~~P~~~g~~PvVv~lHG~~~~~~~y-~~l~~~Las~G~~VvapD~~g~~~~~~--------~~~i~d~~~~~~ 107 (313)
T PLN00021 37 PPKPLLVATPSEAGTYPVLLFLHGYLLYNSFY-SQLLQHIASHGFIVVAPQLYTLAGPDG--------TDEIKDAAAVIN 107 (313)
T ss_pred CCceEEEEeCCCCCCCCEEEEECCCCCCcccH-HHHHHHHHhCCCEEEEecCCCcCCCCc--------hhhHHHHHHHHH
Confidence 5677888888 455679999999999886555 899999999999999999998643211 111233344444
Q ss_pred HHHhh--------hccCCccEEEEEeChhHHHHHHHHhcCCC-----cccEEEEeccccccccccCChhHHHHHHHHHHh
Q 018375 107 SVCAQ--------EEYTDKARFLYGESMGGAVTLLLHKKDPS-----FWNGAVLVAPMCKISEKVKPHPVLVNILTRVEE 173 (357)
Q Consensus 107 ~l~~~--------~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~-----~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (357)
++... ...+.++++++|||+||.+|+.+|..+++ +++++|+++|..........
T Consensus 108 ~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~~~------------- 174 (313)
T PLN00021 108 WLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGKQT------------- 174 (313)
T ss_pred HHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccccccccCC-------------
Confidence 44321 12345789999999999999999988774 58999999987542210000
Q ss_pred hcccCcccCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCCc-----c-
Q 018375 174 IIPKWKIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADT-----V- 247 (357)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~-----~- 247 (357)
.+ .. ........++.+|+|++.+..|. .
T Consensus 175 -------~p--~i-------------------------------------l~~~~~s~~~~~P~liig~g~~~~~~~~~~ 208 (313)
T PLN00021 175 -------PP--PV-------------------------------------LTYAPHSFNLDIPVLVIGTGLGGEPRNPLF 208 (313)
T ss_pred -------CC--cc-------------------------------------cccCcccccCCCCeEEEecCCCcccccccc
Confidence 00 00 00001122367999999998763 2
Q ss_pred ---CChH-HHHHHHHHccCCCceEEEcCCCCcccccCCC-------------------ChhhhhHHHHHHHHHHHhcccc
Q 018375 248 ---TDPE-VSKALYERASSRDKTIKLYPGMWHALTSGEP-------------------DENIDIVFGDIIAWLDERMSDA 304 (357)
Q Consensus 248 ---~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p-------------------~~~~~~~~~~i~~fl~~~~~~~ 304 (357)
.|.. ...++++.++. ++.+.+++++||.-++++. +...+.+...+..||...+..+
T Consensus 209 p~~ap~~~~~~~f~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~c~~g~~~~~~r~~~~g~~~aFl~~~l~~~ 287 (313)
T PLN00021 209 PPCAPDGVNHAEFFNECKA-PAVHFVAKDYGHMDMLDDDTSGIRGKITGCMCKNGKPRKPMRRFVGGAVVAFLKAYLEGD 287 (313)
T ss_pred cccCCCCCCHHHHHHhcCC-CeeeeeecCCCcceeecCCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHhcCc
Confidence 2233 34677888774 8889999999999886654 1334667778899999888665
Q ss_pred c
Q 018375 305 N 305 (357)
Q Consensus 305 ~ 305 (357)
.
T Consensus 288 ~ 288 (313)
T PLN00021 288 T 288 (313)
T ss_pred h
Confidence 4
No 78
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.83 E-value=6.6e-19 Score=145.14 Aligned_cols=250 Identities=22% Similarity=0.268 Sum_probs=143.4
Q ss_pred CCcEEEEEEEcCCCCCceEEEEEccCCccccccHHHHHHHHhhC--CcEEEEeCCCCCccCCCCCccccchhhHHHHHHH
Q 018375 26 RGVQLFTCRWLPFSTPKAVVFLCHGYGMECSGFMRECGTRLASA--GYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDD 103 (357)
Q Consensus 26 ~g~~l~~~~~~p~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~--G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~ 103 (357)
.+..+.|...... .|+|+++||++++...|.. ....+... .|+++.+|+||||.|. .. .......++++..
T Consensus 8 ~~~~~~~~~~~~~---~~~i~~~hg~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~g~g~s~-~~--~~~~~~~~~~~~~ 80 (282)
T COG0596 8 DGVRLAYREAGGG---GPPLVLLHGFPGSSSVWRP-VFKVLPALAARYRVIAPDLRGHGRSD-PA--GYSLSAYADDLAA 80 (282)
T ss_pred CCeEEEEeecCCC---CCeEEEeCCCCCchhhhHH-HHHHhhccccceEEEEecccCCCCCC-cc--cccHHHHHHHHHH
Confidence 4555666655322 5589999999998777743 22222221 1899999999999997 11 1244455888888
Q ss_pred HHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCCh---------hHHHHHHHHH---
Q 018375 104 FFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPH---------PVLVNILTRV--- 171 (357)
Q Consensus 104 ~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~---------~~~~~~~~~~--- 171 (357)
+++.+ +..+++++|||+||.+++.++.++|+.++++|++++........... ..........
T Consensus 81 ~~~~~------~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (282)
T COG0596 81 LLDAL------GLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAA 154 (282)
T ss_pred HHHHh------CCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccchh
Confidence 88887 66779999999999999999999999999999999765411100000 0000000000
Q ss_pred --HhhcccCcccCccccchh-----hccCh-hHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeC
Q 018375 172 --EEIIPKWKIVPTKDVIDS-----AFKDS-IKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGE 243 (357)
Q Consensus 172 --~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~ 243 (357)
........ ........ ..... ............... ............ .........+++|+++++|+
T Consensus 155 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~P~l~i~g~ 230 (282)
T COG0596 155 AFAALLAALG--LLAALAAAARAGLAEALRAPLLGAAAAAFARAAR-ADLAAALLALLD-RDLRAALARITVPTLIIHGE 230 (282)
T ss_pred hhhhhhhccc--ccccccccchhccccccccccchhHhhhhhhhcc-cccchhhhcccc-cccchhhccCCCCeEEEecC
Confidence 00000000 00000000 00000 000000000000000 000000000000 02233466778999999999
Q ss_pred CCccCChHHHHHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHH
Q 018375 244 ADTVTDPEVSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWL 297 (357)
Q Consensus 244 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl 297 (357)
+|.+.+......+.+.+.. ..++.+++++||..++++|+. +.+.+.+|+
T Consensus 231 ~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~p~~----~~~~i~~~~ 279 (282)
T COG0596 231 DDPVVPAELARRLAAALPN-DARLVVIPGAGHFPHLEAPEA----FAAALLAFL 279 (282)
T ss_pred CCCcCCHHHHHHHHhhCCC-CceEEEeCCCCCcchhhcHHH----HHHHHHHHH
Confidence 9977776655666666642 489999999999999999997 777777744
No 79
>PRK10162 acetyl esterase; Provisional
Probab=99.82 E-value=4.4e-18 Score=142.38 Aligned_cols=247 Identities=19% Similarity=0.236 Sum_probs=149.5
Q ss_pred cceeeeeEEecCCcEEEEEEEcCCCCCceEEEEEccCCc---cccccHHHHHHHHhh-CCcEEEEeCCCCCccCCCCCcc
Q 018375 15 VEYQEEYIRNARGVQLFTCRWLPFSTPKAVVFLCHGYGM---ECSGFMRECGTRLAS-AGYAVFGIDYEGHGRSRGARCY 90 (357)
Q Consensus 15 ~~~~~~~~~~~~g~~l~~~~~~p~~~~~p~vv~lHG~~~---~~~~~~~~~~~~l~~-~G~~vi~~d~~G~G~s~~~~~~ 90 (357)
+..++..+...+| .+..++|.|...+.|+||++||.+. +...+ ..++..|+. .|+.|+.+|||.....
T Consensus 55 ~~~~~~~i~~~~g-~i~~~~y~P~~~~~p~vv~~HGGg~~~g~~~~~-~~~~~~la~~~g~~Vv~vdYrlape~------ 126 (318)
T PRK10162 55 MATRAYMVPTPYG-QVETRLYYPQPDSQATLFYLHGGGFILGNLDTH-DRIMRLLASYSGCTVIGIDYTLSPEA------ 126 (318)
T ss_pred ceEEEEEEecCCC-ceEEEEECCCCCCCCEEEEEeCCcccCCCchhh-hHHHHHHHHHcCCEEEEecCCCCCCC------
Confidence 3456666666666 6889999996666799999999763 33344 677888877 4999999999975432
Q ss_pred ccchhhHHHHHHHHHHHHHhh---hccCCccEEEEEeChhHHHHHHHHhcC------CCcccEEEEeccccccccccCCh
Q 018375 91 IKKFENIVNDCDDFFKSVCAQ---EEYTDKARFLYGESMGGAVTLLLHKKD------PSFWNGAVLVAPMCKISEKVKPH 161 (357)
Q Consensus 91 ~~~~~~~~~d~~~~l~~l~~~---~~~~~~~v~lvG~S~Gg~~a~~~a~~~------p~~v~~~vl~~~~~~~~~~~~~~ 161 (357)
.+....+|+.++++++.+. .+++.++++|+|+|+||.+|+.++... +..+.+++++.|..+.... .
T Consensus 127 --~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~--~- 201 (318)
T PRK10162 127 --RFPQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDS--V- 201 (318)
T ss_pred --CCCCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCC--h-
Confidence 2233467777777776542 344567999999999999999988642 3568999999987764211 0
Q ss_pred hHHHHHHHHHHhhcccCcccCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEe
Q 018375 162 PVLVNILTRVEEIIPKWKIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLH 241 (357)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~ 241 (357)
... .....+..... .... .....+....... ..+.. ......+...-.|+++++
T Consensus 202 -s~~-------~~~~~~~~l~~-~~~~------~~~~~y~~~~~~~-~~p~~----------~p~~~~l~~~lPp~~i~~ 255 (318)
T PRK10162 202 -SRR-------LLGGVWDGLTQ-QDLQ------MYEEAYLSNDADR-ESPYY----------CLFNNDLTRDVPPCFIAG 255 (318)
T ss_pred -hHH-------HhCCCccccCH-HHHH------HHHHHhCCCcccc-CCccc----------CcchhhhhcCCCCeEEEe
Confidence 000 00000000000 0000 0000000000000 00000 000112212235999999
Q ss_pred eCCCccCChHHHHHHHHHccC--CCceEEEcCCCCcccccCC-CChhhhhHHHHHHHHHHHhcc
Q 018375 242 GEADTVTDPEVSKALYERASS--RDKTIKLYPGMWHALTSGE-PDENIDIVFGDIIAWLDERMS 302 (357)
Q Consensus 242 g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~-p~~~~~~~~~~i~~fl~~~~~ 302 (357)
|+.|.+.+ +.+.+.+.+.. .++++++++|..|.+.... .-...++..+.+.+||+++++
T Consensus 256 g~~D~L~d--e~~~~~~~L~~aGv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 256 AEFDPLLD--DSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQLK 317 (318)
T ss_pred cCCCcCcC--hHHHHHHHHHHcCCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHHhc
Confidence 99999875 45566665543 4689999999999876432 223356688899999988764
No 80
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.82 E-value=8.2e-19 Score=127.39 Aligned_cols=197 Identities=19% Similarity=0.236 Sum_probs=139.5
Q ss_pred eeeeEEecCCcEEEEEEEcCCCCCceEEEEEccCC---cccc-ccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccc
Q 018375 18 QEEYIRNARGVQLFTCRWLPFSTPKAVVFLCHGYG---MECS-GFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKK 93 (357)
Q Consensus 18 ~~~~~~~~~g~~l~~~~~~p~~~~~p~vv~lHG~~---~~~~-~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~ 93 (357)
.++.+...-| +|....-.+.....|+.|++|..+ ++.. .-...++..|.+.||.++.+|+||.|.|.+..+. .
T Consensus 5 ~~v~i~Gp~G-~le~~~~~~~~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~--G 81 (210)
T COG2945 5 PTVIINGPAG-RLEGRYEPAKTPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDN--G 81 (210)
T ss_pred CcEEecCCcc-cceeccCCCCCCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccC--C
Confidence 3344433333 454443333446788999999743 2211 1235678888999999999999999999987654 2
Q ss_pred hhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHHHHHh
Q 018375 94 FENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTRVEE 173 (357)
Q Consensus 94 ~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (357)
-...+|..++++|++.+.. +.....+.|+|+|+++++.+|.+.|+ ....+.+.|.....+
T Consensus 82 -iGE~~Da~aaldW~~~~hp-~s~~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~~~d----------------- 141 (210)
T COG2945 82 -IGELEDAAAALDWLQARHP-DSASCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPINAYD----------------- 141 (210)
T ss_pred -cchHHHHHHHHHHHHhhCC-CchhhhhcccchHHHHHHHHHHhccc-ccceeeccCCCCchh-----------------
Confidence 2346799999999976543 22334799999999999999999886 455555555432100
Q ss_pred hcccCcccCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCCccCChHHH
Q 018375 174 IIPKWKIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDPEVS 253 (357)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~ 253 (357)
...+....+|.++|+|+.|.+++....
T Consensus 142 -----------------------------------------------------fs~l~P~P~~~lvi~g~~Ddvv~l~~~ 168 (210)
T COG2945 142 -----------------------------------------------------FSFLAPCPSPGLVIQGDADDVVDLVAV 168 (210)
T ss_pred -----------------------------------------------------hhhccCCCCCceeEecChhhhhcHHHH
Confidence 012344567999999999999999888
Q ss_pred HHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHH
Q 018375 254 KALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLD 298 (357)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~ 298 (357)
.++.+.. ..+++++++++|+++- +-.. +.+.|.+|+.
T Consensus 169 l~~~~~~---~~~~i~i~~a~HFF~g-Kl~~----l~~~i~~~l~ 205 (210)
T COG2945 169 LKWQESI---KITVITIPGADHFFHG-KLIE----LRDTIADFLE 205 (210)
T ss_pred HHhhcCC---CCceEEecCCCceecc-cHHH----HHHHHHHHhh
Confidence 8877764 6889999999999983 4444 8888999985
No 81
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.82 E-value=1.4e-18 Score=137.55 Aligned_cols=190 Identities=22% Similarity=0.260 Sum_probs=115.4
Q ss_pred EcCCCCCceEEEEEccCCccccccHHHHHH-HHhhCCcEEEEeCCCC------Ccc---CCCC-----Cc---cccchhh
Q 018375 35 WLPFSTPKAVVFLCHGYGMECSGFMRECGT-RLASAGYAVFGIDYEG------HGR---SRGA-----RC---YIKKFEN 96 (357)
Q Consensus 35 ~~p~~~~~p~vv~lHG~~~~~~~~~~~~~~-~l~~~G~~vi~~d~~G------~G~---s~~~-----~~---~~~~~~~ 96 (357)
..|.++..++||++||+|.+...+ ..+.. .+......++.++-|. .|. +.-. .. ....+.+
T Consensus 7 ~~~~~~~~~lvi~LHG~G~~~~~~-~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~ 85 (216)
T PF02230_consen 7 IEPKGKAKPLVILLHGYGDSEDLF-ALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEE 85 (216)
T ss_dssp E--SST-SEEEEEE--TTS-HHHH-HHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHH
T ss_pred eCCCCCCceEEEEECCCCCCcchh-HHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHH
Confidence 445677899999999999987444 34433 2223357777776542 122 2111 00 1112334
Q ss_pred HHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHHHHHhhcc
Q 018375 97 IVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTRVEEIIP 176 (357)
Q Consensus 97 ~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (357)
.++.+.++|+...+ .+++.++++|+|+|.||.+|+.++.++|+.+.++|.+++........
T Consensus 86 s~~~l~~li~~~~~-~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~------------------ 146 (216)
T PF02230_consen 86 SAERLDELIDEEVA-YGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESEL------------------ 146 (216)
T ss_dssp HHHHHHHHHHHHHH-TT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCC------------------
T ss_pred HHHHHHHHHHHHHH-cCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccccc------------------
Confidence 44555666665543 34678899999999999999999999999999999999875422110
Q ss_pred cCcccCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCCccCChHHHHHH
Q 018375 177 KWKIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDPEVSKAL 256 (357)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~ 256 (357)
........ ++|++++||+.|+++|.+.++..
T Consensus 147 -----------------------------------------------~~~~~~~~--~~pi~~~hG~~D~vvp~~~~~~~ 177 (216)
T PF02230_consen 147 -----------------------------------------------EDRPEALA--KTPILIIHGDEDPVVPFEWAEKT 177 (216)
T ss_dssp -----------------------------------------------HCCHCCCC--TS-EEEEEETT-SSSTHHHHHHH
T ss_pred -----------------------------------------------cccccccC--CCcEEEEecCCCCcccHHHHHHH
Confidence 00000111 68999999999999999988888
Q ss_pred HHHccC--CCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHHhc
Q 018375 257 YERASS--RDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDERM 301 (357)
Q Consensus 257 ~~~~~~--~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~ 301 (357)
.+.+.. .++++..|++.||... .+ ..+.+.+||+++.
T Consensus 178 ~~~L~~~~~~v~~~~~~g~gH~i~----~~----~~~~~~~~l~~~~ 216 (216)
T PF02230_consen 178 AEFLKAAGANVEFHEYPGGGHEIS----PE----ELRDLREFLEKHI 216 (216)
T ss_dssp HHHHHCTT-GEEEEEETT-SSS------HH----HHHHHHHHHHHH-
T ss_pred HHHHHhcCCCEEEEEcCCCCCCCC----HH----HHHHHHHHHhhhC
Confidence 887765 4689999999999875 33 7888999998763
No 82
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.82 E-value=5.4e-19 Score=158.84 Aligned_cols=130 Identities=20% Similarity=0.214 Sum_probs=106.7
Q ss_pred EecCCcEEEEEEEcCC-CCCceEEEEEccCCcccc---ccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHH
Q 018375 23 RNARGVQLFTCRWLPF-STPKAVVFLCHGYGMECS---GFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIV 98 (357)
Q Consensus 23 ~~~~g~~l~~~~~~p~-~~~~p~vv~lHG~~~~~~---~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~ 98 (357)
.+.||.+|++.+|.|. .++.|+||++||++.+.. .+.......|+++||.|+++|+||+|.|.+..... + ...+
T Consensus 2 ~~~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~-~-~~~~ 79 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLL-G-SDEA 79 (550)
T ss_pred cCCCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEec-C-cccc
Confidence 4579999999999994 457899999999987642 22234567888999999999999999998765432 2 5678
Q ss_pred HHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccc
Q 018375 99 NDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKIS 155 (357)
Q Consensus 99 ~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~ 155 (357)
+|+.++++++..+.. ...+|+++|+|+||.+++.+|..+|+.++++|..++..+..
T Consensus 80 ~D~~~~i~~l~~q~~-~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~~ 135 (550)
T TIGR00976 80 ADGYDLVDWIAKQPW-CDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDLY 135 (550)
T ss_pred hHHHHHHHHHHhCCC-CCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccchh
Confidence 999999999976543 35799999999999999999999999999999998876654
No 83
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.81 E-value=6.4e-19 Score=139.16 Aligned_cols=121 Identities=18% Similarity=0.283 Sum_probs=89.3
Q ss_pred EEEEcCC--CCCceEEEEEccCCccccccH--HHHHHHHhhCCcEEEEeCCCCCccCCCCCccc-----cchhhHHHHHH
Q 018375 32 TCRWLPF--STPKAVVFLCHGYGMECSGFM--RECGTRLASAGYAVFGIDYEGHGRSRGARCYI-----KKFENIVNDCD 102 (357)
Q Consensus 32 ~~~~~p~--~~~~p~vv~lHG~~~~~~~~~--~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~-----~~~~~~~~d~~ 102 (357)
+++|.|. .++.|+||++||.+++...+. ..+...+.+.||.|+++|++|++.+....... ........|+.
T Consensus 1 ~~ly~P~~~~~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (212)
T TIGR01840 1 MYVYVPAGLTGPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLH 80 (212)
T ss_pred CEEEcCCCCCCCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHH
Confidence 3567773 356899999999988755442 13555566679999999999987543211100 01123466788
Q ss_pred HHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEecccc
Q 018375 103 DFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMC 152 (357)
Q Consensus 103 ~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 152 (357)
.+++++..+..++.++++|+|||+||.+++.++..+|+.+.+++.+++..
T Consensus 81 ~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 81 QLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred HHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 88888877666667899999999999999999999999999998888764
No 84
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.81 E-value=4.6e-18 Score=132.10 Aligned_cols=209 Identities=19% Similarity=0.240 Sum_probs=136.7
Q ss_pred EEEEEcCCCCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHh
Q 018375 31 FTCRWLPFSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCA 110 (357)
Q Consensus 31 ~~~~~~p~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~ 110 (357)
.|....|.+++..+||-+||.+++...| ..+.+.|.+.|+++|.+++||+|.+.+.....++-.+...-+.++++.|.
T Consensus 24 ~y~D~~~~gs~~gTVv~~hGsPGSH~DF-kYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~- 101 (297)
T PF06342_consen 24 VYEDSLPSGSPLGTVVAFHGSPGSHNDF-KYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELG- 101 (297)
T ss_pred EEEecCCCCCCceeEEEecCCCCCccch-hhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcC-
Confidence 4555556666777999999999998888 89999999999999999999999999988877788888888888888872
Q ss_pred hhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccc-cccCChhHHHHHHHHHHhhcccCcccCccccchh
Q 018375 111 QEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKIS-EKVKPHPVLVNILTRVEEIIPKWKIVPTKDVIDS 189 (357)
Q Consensus 111 ~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (357)
-.++++.+|||.||-.|+.++..+| ..++++++|...-. ....+.+.... ...+...++.+... .+
T Consensus 102 ----i~~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G~r~HkgIrp~~r~~~-i~~l~~~lp~~~~~---~i--- 168 (297)
T PF06342_consen 102 ----IKGKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPGLRPHKGIRPLSRMET-INYLYDLLPRFIIN---AI--- 168 (297)
T ss_pred ----CCCceEEEEeccchHHHHHHHhcCc--cceEEEecCCccccccCcCHHHHHHH-HHHHHHHhhHHHHH---HH---
Confidence 1378899999999999999999996 67999999875433 33333332222 22222222221000 00
Q ss_pred hccChhHHHHHhhcccccC-CccchHHHHH----HHHhhhhHhhccCCccccEEEEeeCCCccCChHHHHHHHHHc
Q 018375 190 AFKDSIKREEIRNNKLIYQ-DKPRLKTALE----MLRTSMSLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYERA 260 (357)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~ 260 (357)
........-.... .......... .+.......+.+.+-++|+++++|.+|.++..+...++.+..
T Consensus 169 ------~~~~y~~iG~KV~~GeeA~na~r~m~~~df~~q~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f 238 (297)
T PF06342_consen 169 ------MYFYYRMIGFKVSDGEEAINAMRSMQNCDFEEQKEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKF 238 (297)
T ss_pred ------HHHHHHHhCeeecChHHHHHHHHHHHhcCHHHHHHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHh
Confidence 0000000000000 0000111110 011122344556666799999999999999888777776655
No 85
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.81 E-value=3.9e-18 Score=134.39 Aligned_cols=260 Identities=11% Similarity=0.133 Sum_probs=157.0
Q ss_pred eeEEecCCcEEEEEEEcCCCCCceEEEEEccCCccccccHHHH-----HHHHhhCCcEEEEeCCCCCccCC--CCCc-cc
Q 018375 20 EYIRNARGVQLFTCRWLPFSTPKAVVFLCHGYGMECSGFMREC-----GTRLASAGYAVFGIDYEGHGRSR--GARC-YI 91 (357)
Q Consensus 20 ~~~~~~~g~~l~~~~~~p~~~~~p~vv~lHG~~~~~~~~~~~~-----~~~l~~~G~~vi~~d~~G~G~s~--~~~~-~~ 91 (357)
+.+.+.-| .|++.+++..++++|++|-.|-.|.+....+..+ .+.+.++ |.++-+|.||+..-. -+.+ ..
T Consensus 2 h~v~t~~G-~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~-f~i~Hi~aPGqe~ga~~~p~~y~y 79 (283)
T PF03096_consen 2 HDVETPYG-SVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQN-FCIYHIDAPGQEEGAATLPEGYQY 79 (283)
T ss_dssp EEEEETTE-EEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTT-SEEEEEE-TTTSTT-----TT---
T ss_pred ceeccCce-EEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhc-eEEEEEeCCCCCCCcccccccccc
Confidence 34556555 7888888765557999999999998866522333 3555555 999999999986543 3333 24
Q ss_pred cchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHHHH
Q 018375 92 KKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTRV 171 (357)
Q Consensus 92 ~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 171 (357)
.+++++++++..+++++ +.+.++.+|-..||++..++|..+|++|.++||+++....... ...+...+
T Consensus 80 Psmd~LAe~l~~Vl~~f------~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw------~Ew~~~K~ 147 (283)
T PF03096_consen 80 PSMDQLAEMLPEVLDHF------GLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGW------MEWFYQKL 147 (283)
T ss_dssp --HHHHHCTHHHHHHHH------T---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---H------HHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhC------CccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccH------HHHHHHHH
Confidence 58999999999999999 8899999999999999999999999999999999997654322 22222222
Q ss_pred Hh-hccc--CcccCccccchhhcc------ChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEee
Q 018375 172 EE-IIPK--WKIVPTKDVIDSAFK------DSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHG 242 (357)
Q Consensus 172 ~~-~~~~--~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g 242 (357)
.. .+.. +.......+....|. ..+..+..+..........++...++.+..+.++....+...||+|++.|
T Consensus 148 ~~~~L~~~gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG 227 (283)
T PF03096_consen 148 SSWLLYSYGMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVG 227 (283)
T ss_dssp H-------CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEE
T ss_pred hcccccccccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEe
Confidence 11 1111 100001111111121 11222222222222233455667777777777888888888999999999
Q ss_pred CCCccCChHHHHHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHH
Q 018375 243 EADTVTDPEVSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDE 299 (357)
Q Consensus 243 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~ 299 (357)
+..+.. +.+..+..++.....+++.++++|=.+..|+|+. +++.+.=|++.
T Consensus 228 ~~Sp~~--~~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~k----laea~~lFlQG 278 (283)
T PF03096_consen 228 DNSPHV--DDVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGK----LAEAFKLFLQG 278 (283)
T ss_dssp TTSTTH--HHHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHH----HHHHHHHHHHH
T ss_pred cCCcch--hhHHHHHhhcCcccceEEEecccCCcccccCcHH----HHHHHHHHHcc
Confidence 999875 5667888888777889999999999999999999 99999999875
No 86
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.81 E-value=1.1e-18 Score=133.46 Aligned_cols=244 Identities=22% Similarity=0.259 Sum_probs=170.0
Q ss_pred CccceeeeeEEecCCcEEEEEEEcC--CCCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCC---
Q 018375 13 TVVEYQEEYIRNARGVQLFTCRWLP--FSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGA--- 87 (357)
Q Consensus 13 ~~~~~~~~~~~~~~g~~l~~~~~~p--~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~--- 87 (357)
..++.-+.+|+..+|.+|..++..| ..++.|.||-.||+++....|...+ .++..||.|+.+|.||.|.|+..
T Consensus 52 ~~ve~ydvTf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l--~wa~~Gyavf~MdvRGQg~~~~dt~~ 129 (321)
T COG3458 52 PRVEVYDVTFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDML--HWAVAGYAVFVMDVRGQGSSSQDTAD 129 (321)
T ss_pred CceEEEEEEEeccCCceEEEEEEeecccCCccceEEEEeeccCCCCCccccc--cccccceeEEEEecccCCCccccCCC
Confidence 4567778899999999999999999 3367899999999999876663332 45667999999999999988421
Q ss_pred -C----------------ccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEecc
Q 018375 88 -R----------------CYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAP 150 (357)
Q Consensus 88 -~----------------~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~ 150 (357)
+ ...+-+.....|+..+++.+.....++.++|.+.|.|.||.+++.+++..| +|++++..-|
T Consensus 130 ~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~P 208 (321)
T COG3458 130 PPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYP 208 (321)
T ss_pred CCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhccccccc
Confidence 0 011223456678888888888877888999999999999999999998887 6999999888
Q ss_pred ccccccccCChhHHHHHHHHHHhhcccCcccCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhcc
Q 018375 151 MCKISEKVKPHPVLVNILTRVEEIIPKWKIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSL 230 (357)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (357)
............. ..+. ..+..++...... -...+..+ ...+.....
T Consensus 209 fl~df~r~i~~~~----------------~~~y-dei~~y~k~h~~~---------------e~~v~~TL-~yfD~~n~A 255 (321)
T COG3458 209 FLSDFPRAIELAT----------------EGPY-DEIQTYFKRHDPK---------------EAEVFETL-SYFDIVNLA 255 (321)
T ss_pred ccccchhheeecc----------------cCcH-HHHHHHHHhcCch---------------HHHHHHHH-hhhhhhhHH
Confidence 7643221100000 0000 0000011000000 00111111 123555667
Q ss_pred CCccccEEEEeeCCCccCChHHHHHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHHh
Q 018375 231 SKVMIPFFVLHGEADTVTDPEVSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDER 300 (357)
Q Consensus 231 ~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~ 300 (357)
.++++|+|+..|-.|++||+...-.+++++.. .+++.+++.-+|.-. |.- ..+.+..|+...
T Consensus 256 ~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~-~K~i~iy~~~aHe~~---p~~----~~~~~~~~l~~l 317 (321)
T COG3458 256 ARIKVPVLMSVGLMDPVCPPSTQFAAYNALTT-SKTIEIYPYFAHEGG---PGF----QSRQQVHFLKIL 317 (321)
T ss_pred HhhccceEEeecccCCCCCChhhHHHhhcccC-CceEEEeeccccccC---cch----hHHHHHHHHHhh
Confidence 88999999999999999999999999999986 788888888778754 554 566688888654
No 87
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.80 E-value=1.8e-17 Score=128.54 Aligned_cols=267 Identities=12% Similarity=0.085 Sum_probs=181.8
Q ss_pred eeeeeEEecCCcEEEEEEEcCCCCCceEEEEEccCCccccccHHH-----HHHHHhhCCcEEEEeCCCCCccCC--CCCc
Q 018375 17 YQEEYIRNARGVQLFTCRWLPFSTPKAVVFLCHGYGMECSGFMRE-----CGTRLASAGYAVFGIDYEGHGRSR--GARC 89 (357)
Q Consensus 17 ~~~~~~~~~~g~~l~~~~~~p~~~~~p~vv~lHG~~~~~~~~~~~-----~~~~l~~~G~~vi~~d~~G~G~s~--~~~~ 89 (357)
.++..+.+..| .+++.+++-.++++|++|-.|..+.+....+.. -+..+.++ |.|+.+|-||+-.-. -+.+
T Consensus 22 ~~e~~V~T~~G-~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p~~ 99 (326)
T KOG2931|consen 22 CQEHDVETAHG-VVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFPEG 99 (326)
T ss_pred ceeeeeccccc-cEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCCCC
Confidence 56677777665 688888876455789999999999886652232 34556667 999999999984433 3333
Q ss_pred -cccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHH
Q 018375 90 -YIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNIL 168 (357)
Q Consensus 90 -~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~ 168 (357)
...+.+++++++..+++++ +.+.++-+|...|+++..++|..+|++|-++||+++......+. .|....+.
T Consensus 100 y~yPsmd~LAd~l~~VL~~f------~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwi--ew~~~K~~ 171 (326)
T KOG2931|consen 100 YPYPSMDDLADMLPEVLDHF------GLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWI--EWAYNKVS 171 (326)
T ss_pred CCCCCHHHHHHHHHHHHHhc------CcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHH--HHHHHHHH
Confidence 2458999999999999999 88999999999999999999999999999999999876543321 22222222
Q ss_pred HHHHhhcccCcccCccccchhhcc------ChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCc----cccEE
Q 018375 169 TRVEEIIPKWKIVPTKDVIDSAFK------DSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKV----MIPFF 238 (357)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i----~~Pvl 238 (357)
..+.......... ..-++...|. +....+..+..........++...++.+..+.++....... +||+|
T Consensus 172 s~~l~~~Gmt~~~-~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vl 250 (326)
T KOG2931|consen 172 SNLLYYYGMTQGV-KDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVL 250 (326)
T ss_pred HHHHHhhchhhhH-HHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCccccccEE
Confidence 1111111000000 0001111111 22222333333333334455666677776666665554444 59999
Q ss_pred EEeeCCCccCChHHHHHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHHh
Q 018375 239 VLHGEADTVTDPEVSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDER 300 (357)
Q Consensus 239 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~ 300 (357)
++.|++.+.+ +.+..+...+...+..+..+.++|-.+..++|.. +.+.+.=|++..
T Consensus 251 lvvGd~Sp~~--~~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~k----l~ea~~~FlqG~ 306 (326)
T KOG2931|consen 251 LVVGDNSPHV--SAVVECNSKLDPTYTTLLKMADCGGLVQEEQPGK----LAEAFKYFLQGM 306 (326)
T ss_pred EEecCCCchh--hhhhhhhcccCcccceEEEEcccCCcccccCchH----HHHHHHHHHccC
Confidence 9999998876 4556667777666889999999999999889999 999999999764
No 88
>PRK10115 protease 2; Provisional
Probab=99.80 E-value=4.9e-18 Score=154.93 Aligned_cols=253 Identities=15% Similarity=0.102 Sum_probs=166.1
Q ss_pred CccceeeeeEEecCCcEEEE-EEEcC---CCCCceEEEEEccCCcccc-ccHHHHHHHHhhCCcEEEEeCCCCCccCCC-
Q 018375 13 TVVEYQEEYIRNARGVQLFT-CRWLP---FSTPKAVVFLCHGYGMECS-GFMRECGTRLASAGYAVFGIDYEGHGRSRG- 86 (357)
Q Consensus 13 ~~~~~~~~~~~~~~g~~l~~-~~~~p---~~~~~p~vv~lHG~~~~~~-~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~- 86 (357)
..+..+..++.+.||.+|.+ .++.| .+++.|+||++||..+... ..|......|+++||.|+.++.||-|.-..
T Consensus 412 ~~~~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~ 491 (686)
T PRK10115 412 ANYRSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQ 491 (686)
T ss_pred cccEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHH
Confidence 35678888999999999998 55555 2456799999999766532 223566678999999999999998654332
Q ss_pred --CCccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHH
Q 018375 87 --ARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVL 164 (357)
Q Consensus 87 --~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~ 164 (357)
..+....-....+|+.+++++|.++.-.+.+++.+.|.|.||+++..++.++|++++++|...|..+....+..
T Consensus 492 w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~---- 567 (686)
T PRK10115 492 WYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLD---- 567 (686)
T ss_pred HHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhccc----
Confidence 11110011244678999999998776667899999999999999999999999999999999998775421100
Q ss_pred HHHHHHHHhhcccCcccCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCcccc-EEEEeeC
Q 018375 165 VNILTRVEEIIPKWKIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIP-FFVLHGE 243 (357)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-vl~i~g~ 243 (357)
..++... .. ...+ ..+.-......+.. .+....+.+++.| +|+++|.
T Consensus 568 --------~~~p~~~-----~~----------~~e~--------G~p~~~~~~~~l~~-~SP~~~v~~~~~P~lLi~~g~ 615 (686)
T PRK10115 568 --------ESIPLTT-----GE----------FEEW--------GNPQDPQYYEYMKS-YSPYDNVTAQAYPHLLVTTGL 615 (686)
T ss_pred --------CCCCCCh-----hH----------HHHh--------CCCCCHHHHHHHHH-cCchhccCccCCCceeEEecC
Confidence 0000000 00 0000 00000111111111 2334456777889 5677999
Q ss_pred CCccCChHHHHHHHHHccC--CCceEEEc---CCCCcccccCCCChhhhhHHHHHHHHHHHhccc
Q 018375 244 ADTVTDPEVSKALYERASS--RDKTIKLY---PGMWHALTSGEPDENIDIVFGDIIAWLDERMSD 303 (357)
Q Consensus 244 ~D~~~~~~~~~~~~~~~~~--~~~~~~~~---~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~~~ 303 (357)
+|.-|++.++.++..++.. .+++++++ +++||... +.... .-+-......|+-..+..
T Consensus 616 ~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~-~~r~~-~~~~~A~~~aFl~~~~~~ 678 (686)
T PRK10115 616 HDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGK-SGRFK-SYEGVAMEYAFLIALAQG 678 (686)
T ss_pred CCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCCCC-cCHHH-HHHHHHHHHHHHHHHhCC
Confidence 9999999999999988864 35677777 99999843 22222 222334456677766654
No 89
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.78 E-value=1.6e-17 Score=126.62 Aligned_cols=220 Identities=17% Similarity=0.223 Sum_probs=141.8
Q ss_pred CCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHH-HHHhhhccCCcc
Q 018375 40 TPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFK-SVCAQEEYTDKA 118 (357)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~-~l~~~~~~~~~~ 118 (357)
..++.++++|-.|+++..| +.+...|... +.++++++||+|..-..... .+++.+++.+...+. .. ...+
T Consensus 5 ~~~~~L~cfP~AGGsa~~f-r~W~~~lp~~-iel~avqlPGR~~r~~ep~~-~di~~Lad~la~el~~~~------~d~P 75 (244)
T COG3208 5 GARLRLFCFPHAGGSASLF-RSWSRRLPAD-IELLAVQLPGRGDRFGEPLL-TDIESLADELANELLPPL------LDAP 75 (244)
T ss_pred CCCceEEEecCCCCCHHHH-HHHHhhCCch-hheeeecCCCcccccCCccc-ccHHHHHHHHHHHhcccc------CCCC
Confidence 4566799999888887766 8888888765 99999999999987554433 477888887777776 33 5779
Q ss_pred EEEEEeChhHHHHHHHHhcCC---CcccEEEEeccccccccccCC--hhHHHHHHHHHHhhcccCcccCccccchhhccC
Q 018375 119 RFLYGESMGGAVTLLLHKKDP---SFWNGAVLVAPMCKISEKVKP--HPVLVNILTRVEEIIPKWKIVPTKDVIDSAFKD 193 (357)
Q Consensus 119 v~lvG~S~Gg~~a~~~a~~~p---~~v~~~vl~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (357)
+.++||||||++|.++|.+.. -.+.++.+.+........... ...-..++..+..+.... ..++.+
T Consensus 76 ~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p---------~e~led 146 (244)
T COG3208 76 FALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTP---------PELLED 146 (244)
T ss_pred eeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCC---------hHHhcC
Confidence 999999999999999996532 126667666654432211110 111122222222221110 011112
Q ss_pred hhHHHHHhhcccccCCccchHHHHHHHHhhhhHhh-----ccCCccccEEEEeeCCCccCChHHHHHHHHHccCCCceEE
Q 018375 194 SIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLED-----SLSKVMIPFFVLHGEADTVTDPEVSKALYERASSRDKTIK 268 (357)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 268 (357)
++.. ...+..+++.....+ .-..+.||+.++.|++|..++.+....+.+..+. ..++.
T Consensus 147 ~El~----------------~l~LPilRAD~~~~e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~-~f~l~ 209 (244)
T COG3208 147 PELM----------------ALFLPILRADFRALESYRYPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTKG-DFTLR 209 (244)
T ss_pred HHHH----------------HHHHHHHHHHHHHhcccccCCCCCcCcceEEeccCcchhccHHHHHHHHHhhcC-CceEE
Confidence 2111 122222222111111 1246799999999999999999999988888774 89999
Q ss_pred EcCCCCcccccCCCChhhhhHHHHHHHHHHH
Q 018375 269 LYPGMWHALTSGEPDENIDIVFGDIIAWLDE 299 (357)
Q Consensus 269 ~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~ 299 (357)
+++| ||++..++.++ +.+.|.+.+..
T Consensus 210 ~fdG-gHFfl~~~~~~----v~~~i~~~l~~ 235 (244)
T COG3208 210 VFDG-GHFFLNQQREE----VLARLEQHLAH 235 (244)
T ss_pred EecC-cceehhhhHHH----HHHHHHHHhhh
Confidence 9997 89998766666 77777766654
No 90
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.77 E-value=2.6e-17 Score=132.98 Aligned_cols=260 Identities=17% Similarity=0.190 Sum_probs=154.4
Q ss_pred CCcEEEEEEEcC-CCCCceEEEEEccCCcccc----------ccHHHHHH---HHhhCCcEEEEeCCCCCc-cCCCCCc-
Q 018375 26 RGVQLFTCRWLP-FSTPKAVVFLCHGYGMECS----------GFMRECGT---RLASAGYAVFGIDYEGHG-RSRGARC- 89 (357)
Q Consensus 26 ~g~~l~~~~~~p-~~~~~p~vv~lHG~~~~~~----------~~~~~~~~---~l~~~G~~vi~~d~~G~G-~s~~~~~- 89 (357)
++..|.|..|+- ......+||++|++.++.. .||+.++- .+....|.||++|..|.+ .|+++..
T Consensus 34 ~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~ 113 (368)
T COG2021 34 SDARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSI 113 (368)
T ss_pred cCcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCc
Confidence 467899999986 3445678999999988533 26665542 233345999999999875 3433321
Q ss_pred -----------cccchhhHHHHHHHHHHHHHhhhccCCccEE-EEEeChhHHHHHHHHhcCCCcccEEEEeccccccccc
Q 018375 90 -----------YIKKFENIVNDCDDFFKSVCAQEEYTDKARF-LYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEK 157 (357)
Q Consensus 90 -----------~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~-lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~ 157 (357)
+..++.++++--..+++.| +.+++. +||-||||+.|+.++..+|++|.+++.+++.......
T Consensus 114 ~p~g~~yg~~FP~~ti~D~V~aq~~ll~~L------GI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~ 187 (368)
T COG2021 114 NPGGKPYGSDFPVITIRDMVRAQRLLLDAL------GIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQ 187 (368)
T ss_pred CCCCCccccCCCcccHHHHHHHHHHHHHhc------CcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHH
Confidence 2245667776666677777 788887 9999999999999999999999999999876543321
Q ss_pred cCChhHHHHHHHHHHhhcccCccc-------Cccc----------------cchhhccC------------h-hHHHHHh
Q 018375 158 VKPHPVLVNILTRVEEIIPKWKIV-------PTKD----------------VIDSAFKD------------S-IKREEIR 201 (357)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~----------------~~~~~~~~------------~-~~~~~~~ 201 (357)
. ..+.......-..-|.|.-. +... .++..+.. . .....+.
T Consensus 188 ~---ia~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~ 264 (368)
T COG2021 188 N---IAFNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLD 264 (368)
T ss_pred H---HHHHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHH
Confidence 1 00111111111111111100 0000 00000000 0 0000000
Q ss_pred hcccccC---CccchHHHHHHHH------hhhhHhhccCCccccEEEEeeCCCccCChHHHHHHHHHccCCCceEEEc-C
Q 018375 202 NNKLIYQ---DKPRLKTALEMLR------TSMSLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYERASSRDKTIKLY-P 271 (357)
Q Consensus 202 ~~~~~~~---~~~~~~~~~~~~~------~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~-~ 271 (357)
..-..+. +...+-.....+. ...++...++++++|+|++.-+.|.+.|++..+++.+.+....+ +.++ .
T Consensus 265 ~qg~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~-~~~i~S 343 (368)
T COG2021 265 YQGDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGA-LREIDS 343 (368)
T ss_pred HHHHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCc-eEEecC
Confidence 0000000 0001111111111 11234445888999999999999999999999999999975333 5444 4
Q ss_pred CCCcccccCCCChhhhhHHHHHHHHHHH
Q 018375 272 GMWHALTSGEPDENIDIVFGDIIAWLDE 299 (357)
Q Consensus 272 ~~gH~~~~~~p~~~~~~~~~~i~~fl~~ 299 (357)
..||..++...+. +...|.+||+.
T Consensus 344 ~~GHDaFL~e~~~----~~~~i~~fL~~ 367 (368)
T COG2021 344 PYGHDAFLVESEA----VGPLIRKFLAL 367 (368)
T ss_pred CCCchhhhcchhh----hhHHHHHHhhc
Confidence 6799988876666 78889999864
No 91
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.76 E-value=2.3e-17 Score=135.42 Aligned_cols=128 Identities=23% Similarity=0.254 Sum_probs=98.6
Q ss_pred CCcEEEEEEEcC---CCCCceEEEEEccCCccccccHHH---------HHHHHhhCCcEEEEeCCCCCccCCCCCccccc
Q 018375 26 RGVQLFTCRWLP---FSTPKAVVFLCHGYGMECSGFMRE---------CGTRLASAGYAVFGIDYEGHGRSRGARCYIKK 93 (357)
Q Consensus 26 ~g~~l~~~~~~p---~~~~~p~vv~lHG~~~~~~~~~~~---------~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~ 93 (357)
||++|...+|.| .+++.|+||..++++......... ....|+++||.|+..|.||.|.|.+.....
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~-- 78 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM-- 78 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT--
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC--
Confidence 799999999999 567789999999998643111011 112388999999999999999999876542
Q ss_pred hhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEecccccccc
Q 018375 94 FENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISE 156 (357)
Q Consensus 94 ~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~ 156 (357)
..+..+|..++|+++..+ .....+|.++|.|++|..++.+|+..|..+++++...+..+...
T Consensus 79 ~~~e~~D~~d~I~W~~~Q-pws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 79 SPNEAQDGYDTIEWIAAQ-PWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp SHHHHHHHHHHHHHHHHC-TTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCC
T ss_pred ChhHHHHHHHHHHHHHhC-CCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccc
Confidence 677899999999999887 44678999999999999999999988888999999988877765
No 92
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.76 E-value=2.3e-16 Score=125.78 Aligned_cols=246 Identities=17% Similarity=0.232 Sum_probs=100.4
Q ss_pred CceEEEEEccCCccc--cccHHHHHHHHhhCCcEEEEeCCC----CCccCCCCCccccchhhHHHHHHHHHHHHHhhhc-
Q 018375 41 PKAVVFLCHGYGMEC--SGFMRECGTRLASAGYAVFGIDYE----GHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEE- 113 (357)
Q Consensus 41 ~~p~vv~lHG~~~~~--~~~~~~~~~~l~~~G~~vi~~d~~----G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~- 113 (357)
+..+||||.|++... ..|...+++.|...||.|+-+-++ |+|.+ ++++.++||.++|++++...+
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~--------SL~~D~~eI~~~v~ylr~~~~g 103 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTS--------SLDRDVEEIAQLVEYLRSEKGG 103 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S----------HHHHHHHHHHHHHHHHHHS--
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcc--------hhhhHHHHHHHHHHHHHHhhcc
Confidence 566899999987643 356789999998889999998765 55544 789999999999999987642
Q ss_pred -cCCccEEEEEeChhHHHHHHHHhcC-----CCcccEEEEeccccccccccCChh---HHHHHHHHHHhhcccCcccC--
Q 018375 114 -YTDKARFLYGESMGGAVTLLLHKKD-----PSFWNGAVLVAPMCKISEKVKPHP---VLVNILTRVEEIIPKWKIVP-- 182 (357)
Q Consensus 114 -~~~~~v~lvG~S~Gg~~a~~~a~~~-----p~~v~~~vl~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-- 182 (357)
.+.++|+|+|||.|+.-++.|+... ...|+++||-+|+.+......... ....................
T Consensus 104 ~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A~~~i~~g~~~~~l 183 (303)
T PF08538_consen 104 HFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEELVALAKELIAEGKGDEIL 183 (303)
T ss_dssp ----S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHHHHHHHCT-TT-GG
T ss_pred ccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHHHHHHHcCCCCcee
Confidence 2578999999999999999998654 256999999999987665443322 23344433333321111000
Q ss_pred ccccchhhc-cChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCCccCChHH-HHHHHHHc
Q 018375 183 TKDVIDSAF-KDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDPEV-SKALYERA 260 (357)
Q Consensus 183 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~-~~~~~~~~ 260 (357)
........+ ..+.....+....... .-..++........+...+.++.+|+|++.+.+|..+|... .+.+.+++
T Consensus 184 p~~~~~~~~~~~PiTA~Rf~SL~s~~----gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~~Ll~rw 259 (303)
T PF08538_consen 184 PREFTPLVFYDTPITAYRFLSLASPG----GDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVDKEALLERW 259 (303)
T ss_dssp ----GGTTT-SS---HHHHHT-S-SS----HHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT---------------
T ss_pred eccccccccCCCcccHHHHHhccCCC----CcccccCCCCCHHHHHHHhccCCCceEEEecCCCceeccccccccccccc
Confidence 001111111 1222222221111100 00111111122245556788899999999999999998642 33444444
Q ss_pred cC--C----CceEEEcCCCCcccccCCCChhhhhHHHHHHHHHH
Q 018375 261 SS--R----DKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLD 298 (357)
Q Consensus 261 ~~--~----~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~ 298 (357)
.. + ...-.++||++|.+--+..++..+.+.+.+..||+
T Consensus 260 ~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 260 KAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp --------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccCC
Confidence 32 1 12245899999998743333334557888888874
No 93
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.76 E-value=3.6e-17 Score=123.39 Aligned_cols=229 Identities=13% Similarity=0.117 Sum_probs=126.7
Q ss_pred eeeEEecCCcEEEEEEEcCC---CCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCC-ccCCCCCccccch
Q 018375 19 EEYIRNARGVQLFTCRWLPF---STPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGH-GRSRGARCYIKKF 94 (357)
Q Consensus 19 ~~~~~~~~g~~l~~~~~~p~---~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~-G~s~~~~~~~~~~ 94 (357)
++.+...+|.+|+.+...|. ...+++||+.+|++-....| ..++.+|+.+||+|+.+|.-.| |.|++.... +++
T Consensus 4 dhvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~-agLA~YL~~NGFhViRyDsl~HvGlSsG~I~e-ftm 81 (294)
T PF02273_consen 4 DHVIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHF-AGLAEYLSANGFHVIRYDSLNHVGLSSGDINE-FTM 81 (294)
T ss_dssp EEEEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGG-HHHHHHHHTTT--EEEE---B--------------H
T ss_pred cceeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHH-HHHHHHHhhCCeEEEeccccccccCCCCChhh-cch
Confidence 45567779999999999993 33468999999999887777 8999999999999999998876 888876554 488
Q ss_pred hhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHHHHHh-
Q 018375 95 ENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTRVEE- 173 (357)
Q Consensus 95 ~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~- 173 (357)
....+++..+++|+..+ +..++.|+.-|+.|-+|+..|++- .+.-+|...++.++.... ...+..
T Consensus 82 s~g~~sL~~V~dwl~~~---g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGVVnlr~TL---------e~al~~D 147 (294)
T PF02273_consen 82 SIGKASLLTVIDWLATR---GIRRIGLIAASLSARIAYEVAADI--NLSFLITAVGVVNLRDTL---------EKALGYD 147 (294)
T ss_dssp HHHHHHHHHHHHHHHHT---T---EEEEEETTHHHHHHHHTTTS----SEEEEES--S-HHHHH---------HHHHSS-
T ss_pred HHhHHHHHHHHHHHHhc---CCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeeeeeHHHHH---------HHHhccc
Confidence 88999999999999644 678899999999999999999854 378888887776543211 111100
Q ss_pred hcccCc--ccCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCCccCChH
Q 018375 174 IIPKWK--IVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDPE 251 (357)
Q Consensus 174 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~ 251 (357)
++..+. ......+.........+...... ..+.........++.+.+|++.+++++|.||...
T Consensus 148 yl~~~i~~lp~dldfeGh~l~~~vFv~dc~e---------------~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~ 212 (294)
T PF02273_consen 148 YLQLPIEQLPEDLDFEGHNLGAEVFVTDCFE---------------HGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQS 212 (294)
T ss_dssp GGGS-GGG--SEEEETTEEEEHHHHHHHHHH---------------TT-SSHHHHHHHHTT--S-EEEEEETT-TTS-HH
T ss_pred hhhcchhhCCCcccccccccchHHHHHHHHH---------------cCCccchhHHHHHhhCCCCEEEEEeCCCccccHH
Confidence 000000 00000000000000000000000 0000112345567888999999999999999999
Q ss_pred HHHHHHHHccCCCceEEEcCCCCcccc
Q 018375 252 VSKALYERASSRDKTIKLYPGMWHALT 278 (357)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~gH~~~ 278 (357)
...++...+....++++.++|+.|.+.
T Consensus 213 eV~~~~~~~~s~~~klysl~Gs~HdL~ 239 (294)
T PF02273_consen 213 EVEELLDNINSNKCKLYSLPGSSHDLG 239 (294)
T ss_dssp HHHHHHTT-TT--EEEEEETT-SS-TT
T ss_pred HHHHHHHhcCCCceeEEEecCccchhh
Confidence 999999988888899999999999986
No 94
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.76 E-value=5.7e-16 Score=133.96 Aligned_cols=240 Identities=12% Similarity=0.060 Sum_probs=145.1
Q ss_pred EEEEEEcCC--CCCceEEEEEccCCccccccH----HHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHH
Q 018375 30 LFTCRWLPF--STPKAVVFLCHGYGMECSGFM----RECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDD 103 (357)
Q Consensus 30 l~~~~~~p~--~~~~p~vv~lHG~~~~~~~~~----~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~ 103 (357)
+....|.|. ...+.+||+++++-.....+- +.++++|.++||.|+++|+++-+..... .+++++++.+.+
T Consensus 201 ~eLiqY~P~te~v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r~----~~ldDYv~~i~~ 276 (560)
T TIGR01839 201 LELIQYKPITEQQHARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHRE----WGLSTYVDALKE 276 (560)
T ss_pred eEEEEeCCCCCCcCCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhcC----CCHHHHHHHHHH
Confidence 344556672 234567999999874433221 5899999999999999999987665422 378999989999
Q ss_pred HHHHHHhhhccCCccEEEEEeChhHHHHHH----HHhcCCC-cccEEEEeccccccccccCChhHH-HHHHHHHHhhccc
Q 018375 104 FFKSVCAQEEYTDKARFLYGESMGGAVTLL----LHKKDPS-FWNGAVLVAPMCKISEKVKPHPVL-VNILTRVEEIIPK 177 (357)
Q Consensus 104 ~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~----~a~~~p~-~v~~~vl~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 177 (357)
+|+.+++.. +.+++.++|+|+||.+++. +++++++ +|++++++.+..++........+. ......+......
T Consensus 277 Ald~V~~~t--G~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~~~~ 354 (560)
T TIGR01839 277 AVDAVRAIT--GSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRRSYQ 354 (560)
T ss_pred HHHHHHHhc--CCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhccChHHHHHHHHHHHh
Confidence 999986543 5789999999999999886 7788886 799999999988876432111111 0111110100000
Q ss_pred CcccCc------------ccc-----chhh-ccCh-hH--HHHHhhcccccCCccchHHHHHHHHhhhhH----------
Q 018375 178 WKIVPT------------KDV-----IDSA-FKDS-IK--REEIRNNKLIYQDKPRLKTALEMLRTSMSL---------- 226 (357)
Q Consensus 178 ~~~~~~------------~~~-----~~~~-~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 226 (357)
....+. ... ...+ ..+. .. ...+..+...+.. .....++..+....-.
T Consensus 355 ~G~lpg~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~lPg-~~~~e~l~ly~~N~L~~pG~l~v~G~ 433 (560)
T TIGR01839 355 AGVLDGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRLPA-AFHGDLLDMFKSNPLTRPDALEVCGT 433 (560)
T ss_pred cCCcCHHHHHHHHHhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCccchH-HHHHHHHHHHhcCCCCCCCCEEECCE
Confidence 000000 000 0000 0000 00 0111111111111 1112222222221111
Q ss_pred hhccCCccccEEEEeeCCCccCChHHHHHHHHHccCCCceEEEcCCCCcccc
Q 018375 227 EDSLSKVMIPFFVLHGEADTVTDPEVSKALYERASSRDKTIKLYPGMWHALT 278 (357)
Q Consensus 227 ~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 278 (357)
.-++.+|++|++++.|+.|.++|++.+..+.+.+.+ +++++..+ +||..-
T Consensus 434 ~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs-~~~fvl~~-gGHIgg 483 (560)
T TIGR01839 434 PIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGG-KRRFVLSN-SGHIQS 483 (560)
T ss_pred EechhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCC-CeEEEecC-CCcccc
Confidence 125788999999999999999999999999998876 68877776 477643
No 95
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.75 E-value=4.1e-17 Score=121.94 Aligned_cols=259 Identities=18% Similarity=0.235 Sum_probs=156.2
Q ss_pred eeEEecCCcEEEEEEEcCCCCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCc--cccchhhH
Q 018375 20 EYIRNARGVQLFTCRWLPFSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARC--YIKKFENI 97 (357)
Q Consensus 20 ~~~~~~~g~~l~~~~~~p~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~--~~~~~~~~ 97 (357)
..+...||..+..+.|-. .++.+-.|++.|..+-...|++.++..++++||.|+++||||.|.|..... ....+.++
T Consensus 8 ~~l~~~DG~~l~~~~~pA-~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~Dw 86 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPA-DGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDW 86 (281)
T ss_pred cccccCCCccCccccccC-CCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhh
Confidence 457788999999998843 334443455555555556667999999999999999999999999986533 22355666
Q ss_pred H-HHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHH--HHHHHHHhh
Q 018375 98 V-NDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLV--NILTRVEEI 174 (357)
Q Consensus 98 ~-~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 174 (357)
+ .|+.++|+++++.. +..+...+|||+||.+...+. +++ +..+....+........+....... .+.......
T Consensus 87 A~~D~~aal~~~~~~~--~~~P~y~vgHS~GGqa~gL~~-~~~-k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~p~ 162 (281)
T COG4757 87 ARLDFPAALAALKKAL--PGHPLYFVGHSFGGQALGLLG-QHP-KYAAFAVFGSGAGWSGWMGLRERLGAVLLWNLVGPP 162 (281)
T ss_pred hhcchHHHHHHHHhhC--CCCceEEeeccccceeecccc-cCc-ccceeeEeccccccccchhhhhcccceeeccccccc
Confidence 5 48999999986533 467899999999998766554 444 4555555544433222111100000 000000000
Q ss_pred cccCcccCccccchhh--ccChhHHH--HHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCCccCCh
Q 018375 175 IPKWKIVPTKDVIDSA--FKDSIKRE--EIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDP 250 (357)
Q Consensus 175 ~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~ 250 (357)
+..|.......+...- ......++ .+...+..+...+... ...+..+.+.+|++.+...+|+++|+
T Consensus 163 lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~----------~~~q~yaaVrtPi~~~~~~DD~w~P~ 232 (281)
T COG4757 163 LTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMR----------NYRQVYAAVRTPITFSRALDDPWAPP 232 (281)
T ss_pred hhhccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChhHh----------HHHHHHHHhcCceeeeccCCCCcCCH
Confidence 1111100000000000 00111111 1112222222222221 23445677899999999999999999
Q ss_pred HHHHHHHHHccCCCceEEEcCCC----CcccccCCC-ChhhhhHHHHHHHHH
Q 018375 251 EVSKALYERASSRDKTIKLYPGM----WHALTSGEP-DENIDIVFGDIIAWL 297 (357)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~----gH~~~~~~p-~~~~~~~~~~i~~fl 297 (357)
...+.+.+...+...+...++.+ ||+-++.++ |. .++++++|+
T Consensus 233 As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ea----lwk~~L~w~ 280 (281)
T COG4757 233 ASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEA----LWKEMLGWF 280 (281)
T ss_pred HHHHHHHHhhhcCcccceecCcccCcccchhhhccchHH----HHHHHHHhh
Confidence 99999999887666777777654 999887776 55 888888876
No 96
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.74 E-value=5.5e-16 Score=130.30 Aligned_cols=273 Identities=11% Similarity=0.051 Sum_probs=160.9
Q ss_pred ceeeeeEEecCCcEEEEEEEcCCCCC----ceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccc
Q 018375 16 EYQEEYIRNARGVQLFTCRWLPFSTP----KAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYI 91 (357)
Q Consensus 16 ~~~~~~~~~~~g~~l~~~~~~p~~~~----~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~ 91 (357)
.+++..+...+-.+| ..|.|...+ .|+||++..+.+......+.+++.|.+ |+.|+.+|+..-+......+.
T Consensus 74 ~v~e~vV~~~~~~~L--~~y~~~~~~~~~~~~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~~~- 149 (406)
T TIGR01849 74 PIRERVVWDKPFCRL--IHFKRQGFRAELPGPAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPLSAGK- 149 (406)
T ss_pred eeEEEEEEECCCeEE--EEECCCCcccccCCCcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchhcCC-
Confidence 344444444444444 334453211 378999999887766666889999999 999999999877754322222
Q ss_pred cchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcC-----CCcccEEEEeccccccccccCChhHH--
Q 018375 92 KKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKD-----PSFWNGAVLVAPMCKISEKVKPHPVL-- 164 (357)
Q Consensus 92 ~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~-----p~~v~~~vl~~~~~~~~~~~~~~~~~-- 164 (357)
.+++++++-+.++++.+ +.+ ++++|+|+||.+++.+++.. |.+++++++++++.++.........+
T Consensus 150 f~ldDYi~~l~~~i~~~------G~~-v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~ 222 (406)
T TIGR01849 150 FDLEDYIDYLIEFIRFL------GPD-IHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAR 222 (406)
T ss_pred CCHHHHHHHHHHHHHHh------CCC-CcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhh
Confidence 38899998888888887 455 99999999999977665443 66799999999988876431111110
Q ss_pred ----HHHHHHHHhhcc----cCc--ccCcc-------------------ccchhhc-cChhHHHHH----h--hcccccC
Q 018375 165 ----VNILTRVEEIIP----KWK--IVPTK-------------------DVIDSAF-KDSIKREEI----R--NNKLIYQ 208 (357)
Q Consensus 165 ----~~~~~~~~~~~~----~~~--~~~~~-------------------~~~~~~~-~~~~~~~~~----~--~~~~~~~ 208 (357)
..+...+....+ ... ..+.. .+...+. .+....... . .....+.
T Consensus 223 ~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~~~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlp 302 (406)
T TIGR01849 223 EKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQLAGFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMT 302 (406)
T ss_pred cccHHHHHHHhhhccCccccCCCCcccCHHHHHHHHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCc
Confidence 001111111100 011 11100 0001110 000000000 0 0000000
Q ss_pred CccchHHHHHHHHhhhhH---------hhccCCcc-ccEEEEeeCCCccCChHHHHHHHHHc---cCCCceEEEcCCCCc
Q 018375 209 DKPRLKTALEMLRTSMSL---------EDSLSKVM-IPFFVLHGEADTVTDPEVSKALYERA---SSRDKTIKLYPGMWH 275 (357)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~---------~~~~~~i~-~Pvl~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~~gH 275 (357)
...........+....-. .-++++|+ +|+|.+.|++|.++++.+++.+.+.+ ++.+++..+.+++||
T Consensus 303 ge~y~~~v~~vf~~n~L~~G~l~v~G~~Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH 382 (406)
T TIGR01849 303 AEFYLQTIDVVFQQFLLPQGKFIVEGKRVDPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGH 382 (406)
T ss_pred HHHHHHHHHHHHHhCCccCCcEEECCEEecHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCe
Confidence 000011111111111100 11467788 99999999999999999999998875 445667888888999
Q ss_pred ccccCCCChhhhhHHHHHHHHHHHh
Q 018375 276 ALTSGEPDENIDIVFGDIIAWLDER 300 (357)
Q Consensus 276 ~~~~~~p~~~~~~~~~~i~~fl~~~ 300 (357)
...+.... ..++++..|.+||.++
T Consensus 383 ~Gvf~G~r-~~~~i~P~i~~wl~~~ 406 (406)
T TIGR01849 383 YGVFSGSR-FREEIYPLVREFIRRN 406 (406)
T ss_pred EEEeeChh-hhhhhchHHHHHHHhC
Confidence 98765544 4667999999999763
No 97
>COG0400 Predicted esterase [General function prediction only]
Probab=99.74 E-value=1.4e-16 Score=121.98 Aligned_cols=186 Identities=17% Similarity=0.203 Sum_probs=128.3
Q ss_pred EEcCCCCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCC--ccCC---CCCccccc---hhhHHHHHHHHH
Q 018375 34 RWLPFSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGH--GRSR---GARCYIKK---FENIVNDCDDFF 105 (357)
Q Consensus 34 ~~~p~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~--G~s~---~~~~~~~~---~~~~~~d~~~~l 105 (357)
+..|.++..|+||++||+|++...+ -++...+..+ +.++.+.-+-- |.-. ......++ +....+.+.+++
T Consensus 10 i~~~~~p~~~~iilLHG~Ggde~~~-~~~~~~~~P~-~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l 87 (207)
T COG0400 10 IEKPGDPAAPLLILLHGLGGDELDL-VPLPELILPN-ATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFL 87 (207)
T ss_pred ccCCCCCCCcEEEEEecCCCChhhh-hhhhhhcCCC-CeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHH
Confidence 3445666778999999999887666 3455555554 66655532210 1000 00001112 233344555666
Q ss_pred HHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHHHHHhhcccCcccCccc
Q 018375 106 KSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTRVEEIIPKWKIVPTKD 185 (357)
Q Consensus 106 ~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (357)
+.+....+.+.++++++|+|-||++++.+..++|..++++++++|........
T Consensus 88 ~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~~--------------------------- 140 (207)
T COG0400 88 EELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPEL--------------------------- 140 (207)
T ss_pred HHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCcc---------------------------
Confidence 66666677788999999999999999999999999999999999876433110
Q ss_pred cchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCCccCChHHHHHHHHHccC--C
Q 018375 186 VIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYERASS--R 263 (357)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~--~ 263 (357)
.-..-..|+++++|+.|++||...+.++.+.+.. .
T Consensus 141 -------------------------------------------~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~ 177 (207)
T COG0400 141 -------------------------------------------LPDLAGTPILLSHGTEDPVVPLALAEALAEYLTASGA 177 (207)
T ss_pred -------------------------------------------ccccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCC
Confidence 0012257999999999999999988888776654 5
Q ss_pred CceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHHh
Q 018375 264 DKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDER 300 (357)
Q Consensus 264 ~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~ 300 (357)
+++...++ .||... .+ ..+.+.+|+.+.
T Consensus 178 ~v~~~~~~-~GH~i~----~e----~~~~~~~wl~~~ 205 (207)
T COG0400 178 DVEVRWHE-GGHEIP----PE----ELEAARSWLANT 205 (207)
T ss_pred CEEEEEec-CCCcCC----HH----HHHHHHHHHHhc
Confidence 78888888 799875 33 577788898764
No 98
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.71 E-value=4.8e-16 Score=116.57 Aligned_cols=155 Identities=20% Similarity=0.250 Sum_probs=104.6
Q ss_pred EEEEccCCccc-cccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEEEEE
Q 018375 45 VFLCHGYGMEC-SGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYG 123 (357)
Q Consensus 45 vv~lHG~~~~~-~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG 123 (357)
|+++||++++. ..|+..+.+.|... ++|-..++ +. .+.+++...+.+.+..+ .++++|||
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~------~~-----P~~~~W~~~l~~~i~~~-------~~~~ilVa 61 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW------DN-----PDLDEWVQALDQAIDAI-------DEPTILVA 61 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC--------TS-------HHHHHHHHHHCCHC--------TTTEEEEE
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc------CC-----CCHHHHHHHHHHHHhhc-------CCCeEEEE
Confidence 68999998874 46777778888776 78877776 11 26677777777776655 56799999
Q ss_pred eChhHHHHHHHH-hcCCCcccEEEEeccccccccccCChhHHHHHHHHHHhhcccCcccCccccchhhccChhHHHHHhh
Q 018375 124 ESMGGAVTLLLH-KKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTRVEEIIPKWKIVPTKDVIDSAFKDSIKREEIRN 202 (357)
Q Consensus 124 ~S~Gg~~a~~~a-~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (357)
||+|+..++.++ .....+|.+++|++|+......... ....
T Consensus 62 HSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~~~~------------------------~~~~-------------- 103 (171)
T PF06821_consen 62 HSLGCLTALRWLAEQSQKKVAGALLVAPFDPDDPEPFP------------------------PELD-------------- 103 (171)
T ss_dssp ETHHHHHHHHHHHHTCCSSEEEEEEES--SCGCHHCCT------------------------CGGC--------------
T ss_pred eCHHHHHHHHHHhhcccccccEEEEEcCCCcccccchh------------------------hhcc--------------
Confidence 999999999999 7777889999999997532000000 0000
Q ss_pred cccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCCccCChHHHHHHHHHccCCCceEEEcCCCCcccccC
Q 018375 203 NKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYERASSRDKTIKLYPGMWHALTSG 280 (357)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 280 (357)
.+ .......+.+|.++|.+++|+++|.+.++.+++.+ +++++.++++||+..-+
T Consensus 104 ---~f------------------~~~p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l---~a~~~~~~~~GHf~~~~ 157 (171)
T PF06821_consen 104 ---GF------------------TPLPRDPLPFPSIVIASDNDPYVPFERAQRLAQRL---GAELIILGGGGHFNAAS 157 (171)
T ss_dssp ---CC------------------TTSHCCHHHCCEEEEEETTBSSS-HHHHHHHHHHH---T-EEEEETS-TTSSGGG
T ss_pred ---cc------------------ccCcccccCCCeEEEEcCCCCccCHHHHHHHHHHc---CCCeEECCCCCCccccc
Confidence 00 00012334677899999999999999999999999 79999999999998643
No 99
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.71 E-value=6.6e-17 Score=104.00 Aligned_cols=79 Identities=43% Similarity=0.789 Sum_probs=71.5
Q ss_pred CcEEEEEEEcCCCCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHH
Q 018375 27 GVQLFTCRWLPFSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFK 106 (357)
Q Consensus 27 g~~l~~~~~~p~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~ 106 (357)
|.+|+++.|.|.++++.+|+++||++.++..| ..+++.|+++||.|+++|+||||.|.+......+++++++|+..+++
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~ry-~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSGRY-AHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHHHH-HHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHhC
Confidence 67899999999666799999999999887765 99999999999999999999999999887777799999999998863
No 100
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.68 E-value=9.8e-16 Score=130.26 Aligned_cols=114 Identities=13% Similarity=0.121 Sum_probs=90.0
Q ss_pred CCceEEEEEccCCccc--cccHHHHHHHHhh--CCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccC
Q 018375 40 TPKAVVFLCHGYGMEC--SGFMRECGTRLAS--AGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYT 115 (357)
Q Consensus 40 ~~~p~vv~lHG~~~~~--~~~~~~~~~~l~~--~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~ 115 (357)
...|++|++|||+.+. ..|...++..|.. ..++|+++|++|+|.+..+... ......++++.++++.|.+..+.+
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~-~~t~~vg~~la~lI~~L~~~~gl~ 117 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSA-AYTKLVGKDVAKFVNWMQEEFNYP 117 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCcccc-ccHHHHHHHHHHHHHHHHHhhCCC
Confidence 4578999999998753 3454456666642 2599999999999988655332 234667788899999886655566
Q ss_pred CccEEEEEeChhHHHHHHHHhcCCCcccEEEEecccccc
Q 018375 116 DKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKI 154 (357)
Q Consensus 116 ~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 154 (357)
.++++|+||||||.+|..++...|++|.++++++|....
T Consensus 118 l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP~ 156 (442)
T TIGR03230 118 WDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGPT 156 (442)
T ss_pred CCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCCc
Confidence 889999999999999999999999999999999997543
No 101
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.68 E-value=7.3e-15 Score=123.30 Aligned_cols=284 Identities=17% Similarity=0.173 Sum_probs=173.6
Q ss_pred ccceeeeeEEecCCcEEEEEEEcC-CCCCceEEEEEccCCccccccH-----HHHHHHHhhCCcEEEEeCCCCCccCCCC
Q 018375 14 VVEYQEEYIRNARGVQLFTCRWLP-FSTPKAVVFLCHGYGMECSGFM-----RECGTRLASAGYAVFGIDYEGHGRSRGA 87 (357)
Q Consensus 14 ~~~~~~~~~~~~~g~~l~~~~~~p-~~~~~p~vv~lHG~~~~~~~~~-----~~~~~~l~~~G~~vi~~d~~G~G~s~~~ 87 (357)
+++.|++.+.+.||..|.... .| ..+++|+|++.||+.+++..|. ..++-.|+++||.|..-+.||.-.|...
T Consensus 45 gy~~E~h~V~T~DgYiL~lhR-Ip~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h 123 (403)
T KOG2624|consen 45 GYPVEEHEVTTEDGYILTLHR-IPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKH 123 (403)
T ss_pred CCceEEEEEEccCCeEEEEee-ecCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhh
Confidence 567999999999999555443 34 3378999999999988877773 4577889999999999999997766532
Q ss_pred C---------ccccchhhHH-HHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCC---cccEEEEecccccc
Q 018375 88 R---------CYIKKFENIV-NDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPS---FWNGAVLVAPMCKI 154 (357)
Q Consensus 88 ~---------~~~~~~~~~~-~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~---~v~~~vl~~~~~~~ 154 (357)
. -...++++++ .|+.+.|+++.+.. +.++++.+|||.|+.....++...|+ +|+..++++|+...
T Consensus 124 ~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T--~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~ 201 (403)
T KOG2624|consen 124 KKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKT--GQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFP 201 (403)
T ss_pred cccCCcCCcceeecchhhhhhcCHHHHHHHHHHhc--cccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhh
Confidence 1 2345777754 49999999996654 57899999999999999999888775 69999999998844
Q ss_pred ccccCChhHHHHHH----HHHHhhcccCcccCccccc----hhhccChhHHHHH-----------------hhcc-cccC
Q 018375 155 SEKVKPHPVLVNIL----TRVEEIIPKWKIVPTKDVI----DSAFKDSIKREEI-----------------RNNK-LIYQ 208 (357)
Q Consensus 155 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-----------------~~~~-~~~~ 208 (357)
.............. ..+...+......+...+. ............+ .... ..+.
T Consensus 202 k~~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~~n~~~~~~~~~ 281 (403)
T KOG2624|consen 202 KHIKSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSNNWNTTLLPVYLA 281 (403)
T ss_pred cccccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHhhhhcccchhhc
Confidence 31111110000000 0111111111111111110 1011100000000 0000 0000
Q ss_pred ---CccchHHH---HHHH-------------------HhhhhHhhccCCccccEEEEeeCCCccCChHHHHHHHHHccCC
Q 018375 209 ---DKPRLKTA---LEML-------------------RTSMSLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYERASSR 263 (357)
Q Consensus 209 ---~~~~~~~~---~~~~-------------------~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~ 263 (357)
...+.+.. .+.. .........+.++++|+.+.+|+.|.++.++.+..+...+...
T Consensus 282 h~pagtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~DV~~~~~~~~~~ 361 (403)
T KOG2624|consen 282 HLPAGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPEDVLILLLVLPNS 361 (403)
T ss_pred cCCCCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHHHHHHHHHhcccc
Confidence 00011111 1111 1112233457788999999999999999999999888877642
Q ss_pred CceEEE-cCCCCcccccCCCChhhhhHHHHHHHHHHHhc
Q 018375 264 DKTIKL-YPGMWHALTSGEPDENIDIVFGDIIAWLDERM 301 (357)
Q Consensus 264 ~~~~~~-~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~ 301 (357)
.....+ +++-.|.-++-.-+ ..+.+.+.|++.++...
T Consensus 362 ~~~~~~~~~~ynHlDFi~g~d-a~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 362 VIKYIVPIPEYNHLDFIWGLD-AKEEVYDPVIERLRLFE 399 (403)
T ss_pred cccccccCCCccceeeeeccC-cHHHHHHHHHHHHHhhh
Confidence 332222 78889987653322 34558888888887654
No 102
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.67 E-value=4.5e-16 Score=126.94 Aligned_cols=125 Identities=13% Similarity=0.191 Sum_probs=93.3
Q ss_pred CCcEEEEEEEcCCCCCceEEEEEccCCccc-cccHHHHHHHHhh-CCcEEEEeCCCCCccCCCCCccccchhhHHHHHHH
Q 018375 26 RGVQLFTCRWLPFSTPKAVVFLCHGYGMEC-SGFMRECGTRLAS-AGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDD 103 (357)
Q Consensus 26 ~g~~l~~~~~~p~~~~~p~vv~lHG~~~~~-~~~~~~~~~~l~~-~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~ 103 (357)
++..+.+..+ +..+|++|++|||+++. ..|...+...+.. .+++|+++|+++++.+..+ ....+.....+++..
T Consensus 23 ~~~~~~~~~f---~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~-~a~~~~~~v~~~la~ 98 (275)
T cd00707 23 DPSSLKNSNF---NPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYP-QAVNNTRVVGAELAK 98 (275)
T ss_pred ChhhhhhcCC---CCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChH-HHHHhHHHHHHHHHH
Confidence 3445555444 34578899999999886 5665666665544 5799999999988433211 111245566778888
Q ss_pred HHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEecccccc
Q 018375 104 FFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKI 154 (357)
Q Consensus 104 ~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 154 (357)
+++.+.+..+.+.++++|+||||||.+|..++.+.|++|.++++++|....
T Consensus 99 ~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 99 FLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPL 149 (275)
T ss_pred HHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCccc
Confidence 888886654556789999999999999999999999999999999987643
No 103
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.65 E-value=1.1e-14 Score=108.78 Aligned_cols=184 Identities=21% Similarity=0.265 Sum_probs=135.1
Q ss_pred eEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCC-CCccCCCCCc-------cccchhhHHHHHHHHHHHHHhhhcc
Q 018375 43 AVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYE-GHGRSRGARC-------YIKKFENIVNDCDDFFKSVCAQEEY 114 (357)
Q Consensus 43 p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~-G~G~s~~~~~-------~~~~~~~~~~d~~~~l~~l~~~~~~ 114 (357)
..||++--+.+....-.+..+..++.+||.|+++|+- |-..+..... ...+.+...+++..++++++. ..
T Consensus 40 ~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~--~g 117 (242)
T KOG3043|consen 40 KVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKN--HG 117 (242)
T ss_pred eEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHH--cC
Confidence 4666666655544443478899999999999999975 3112211100 112445566799999999963 33
Q ss_pred CCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHHHHHhhcccCcccCccccchhhccCh
Q 018375 115 TDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTRVEEIIPKWKIVPTKDVIDSAFKDS 194 (357)
Q Consensus 115 ~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (357)
...+|.++|.||||.++..+.+..| .+.+++..-|...
T Consensus 118 ~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~----------------------------------------- 155 (242)
T KOG3043|consen 118 DSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFV----------------------------------------- 155 (242)
T ss_pred CcceeeEEEEeecceEEEEeeccch-hheeeeEecCCcC-----------------------------------------
Confidence 4789999999999999999988887 5888887766432
Q ss_pred hHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCCccCChHHHHHHHHHccC---CCceEEEcC
Q 018375 195 IKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYERASS---RDKTIKLYP 271 (357)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~ 271 (357)
+ ..++.++++|+|++.|+.|.++|+.....+-+.+.. ...++.+++
T Consensus 156 ------------------------------d-~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~ 204 (242)
T KOG3043|consen 156 ------------------------------D-SADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFS 204 (242)
T ss_pred ------------------------------C-hhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcC
Confidence 1 235577889999999999999999988888887765 224699999
Q ss_pred CCCccccc-----CCCCh--hhhhHHHHHHHHHHHhc
Q 018375 272 GMWHALTS-----GEPDE--NIDIVFGDIIAWLDERM 301 (357)
Q Consensus 272 ~~gH~~~~-----~~p~~--~~~~~~~~i~~fl~~~~ 301 (357)
+.+|.+.. +.|+. ..++..+.++.|+++++
T Consensus 205 g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y~ 241 (242)
T KOG3043|consen 205 GVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHYL 241 (242)
T ss_pred CccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHhh
Confidence 99998873 34432 45778899999998875
No 104
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.65 E-value=3.9e-14 Score=114.79 Aligned_cols=114 Identities=18% Similarity=0.262 Sum_probs=93.5
Q ss_pred ceEEEEEccCCccccccHHHHHHHHhhC---CcEEEEeCCCCCccCCCC-----CccccchhhHHHHHHHHHHHHHhhhc
Q 018375 42 KAVVFLCHGYGMECSGFMRECGTRLASA---GYAVFGIDYEGHGRSRGA-----RCYIKKFENIVNDCDDFFKSVCAQEE 113 (357)
Q Consensus 42 ~p~vv~lHG~~~~~~~~~~~~~~~l~~~---G~~vi~~d~~G~G~s~~~-----~~~~~~~~~~~~d~~~~l~~l~~~~~ 113 (357)
+..+||++|.+|-...| ..+.+.|.+. .+.|+++.+.||-.+... ....++++++++-..++++.+.....
T Consensus 2 ~~li~~IPGNPGlv~fY-~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~ 80 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFY-EEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKN 80 (266)
T ss_pred cEEEEEECCCCChHHHH-HHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhc
Confidence 56899999999986655 7888877744 699999999999777655 34567999999999999999865433
Q ss_pred cCCccEEEEEeChhHHHHHHHHhcCC---CcccEEEEecccccccc
Q 018375 114 YTDKARFLYGESMGGAVTLLLHKKDP---SFWNGAVLVAPMCKISE 156 (357)
Q Consensus 114 ~~~~~v~lvG~S~Gg~~a~~~a~~~p---~~v~~~vl~~~~~~~~~ 156 (357)
....+++|+|||.|++++++++.+.+ .+|.+++++-|......
T Consensus 81 ~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ia 126 (266)
T PF10230_consen 81 KPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDIA 126 (266)
T ss_pred CCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcccccc
Confidence 24688999999999999999999998 67999999998765433
No 105
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.64 E-value=1.3e-15 Score=124.58 Aligned_cols=139 Identities=19% Similarity=0.182 Sum_probs=93.1
Q ss_pred CccceeeeeEEecCCcEEEEEEEcCC--CCCceEEEEEccCCccccc--------------c---HHHHHHHHhhCCcEE
Q 018375 13 TVVEYQEEYIRNARGVQLFTCRWLPF--STPKAVVFLCHGYGMECSG--------------F---MRECGTRLASAGYAV 73 (357)
Q Consensus 13 ~~~~~~~~~~~~~~g~~l~~~~~~p~--~~~~p~vv~lHG~~~~~~~--------------~---~~~~~~~l~~~G~~v 73 (357)
.+++.+...|.+.++..+..++..|. .++.|+||++||-++.... + ...++..|+++||.|
T Consensus 84 dGY~~EKv~f~~~p~~~vpaylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVv 163 (390)
T PF12715_consen 84 DGYTREKVEFNTTPGSRVPAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVV 163 (390)
T ss_dssp TTEEEEEEEE--STTB-EEEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEE
T ss_pred CCeEEEEEEEEccCCeeEEEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEE
Confidence 46788889999999999999999994 4788999999997654311 1 134688999999999
Q ss_pred EEeCCCCCccCCCCCcc----ccchh---------------hHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHH
Q 018375 74 FGIDYEGHGRSRGARCY----IKKFE---------------NIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLL 134 (357)
Q Consensus 74 i~~d~~G~G~s~~~~~~----~~~~~---------------~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~ 134 (357)
+++|.+|+|+....... .++.+ ..+-|...++++|..+..++.++|.++|+||||..++.+
T Consensus 164 la~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~L 243 (390)
T PF12715_consen 164 LAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWL 243 (390)
T ss_dssp EEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHH
T ss_pred EEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHH
Confidence 99999999997653311 11111 122356678999988888899999999999999999999
Q ss_pred HhcCCCcccEEEEecccc
Q 018375 135 HKKDPSFWNGAVLVAPMC 152 (357)
Q Consensus 135 a~~~p~~v~~~vl~~~~~ 152 (357)
++..+ +|++.|..+-..
T Consensus 244 aALDd-RIka~v~~~~l~ 260 (390)
T PF12715_consen 244 AALDD-RIKATVANGYLC 260 (390)
T ss_dssp HHH-T-T--EEEEES-B-
T ss_pred HHcch-hhHhHhhhhhhh
Confidence 99875 688888776554
No 106
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.64 E-value=3.8e-14 Score=111.10 Aligned_cols=181 Identities=15% Similarity=0.181 Sum_probs=122.0
Q ss_pred EEEcC-CCCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhh
Q 018375 33 CRWLP-FSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQ 111 (357)
Q Consensus 33 ~~~~p-~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~ 111 (357)
.++.| ..+..|+|||+||+... ..|+..+.++++++||.|+.+|+...+.. .-...++++.++++|+.+.
T Consensus 7 ~v~~P~~~g~yPVv~f~~G~~~~-~s~Ys~ll~hvAShGyIVV~~d~~~~~~~--------~~~~~~~~~~~vi~Wl~~~ 77 (259)
T PF12740_consen 7 LVYYPSSAGTYPVVLFLHGFLLI-NSWYSQLLEHVASHGYIVVAPDLYSIGGP--------DDTDEVASAAEVIDWLAKG 77 (259)
T ss_pred EEEecCCCCCcCEEEEeCCcCCC-HHHHHHHHHHHHhCceEEEEecccccCCC--------CcchhHHHHHHHHHHHHhc
Confidence 45566 55678999999999954 55569999999999999999997653321 2233355666666665441
Q ss_pred h--------ccCCccEEEEEeChhHHHHHHHHhcC-----CCcccEEEEeccccccccccCChhHHHHHHHHHHhhcccC
Q 018375 112 E--------EYTDKARFLYGESMGGAVTLLLHKKD-----PSFWNGAVLVAPMCKISEKVKPHPVLVNILTRVEEIIPKW 178 (357)
Q Consensus 112 ~--------~~~~~~v~lvG~S~Gg~~a~~~a~~~-----p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (357)
. ..+..++.|.|||.||-+|..++..+ +.+++++++++|+.......... +
T Consensus 78 L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~~~~~~~~--------------P-- 141 (259)
T PF12740_consen 78 LESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGMSKGSQTE--------------P-- 141 (259)
T ss_pred chhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccccccccCCC--------------C--
Confidence 1 12567899999999999999999877 45799999999986322110000 0
Q ss_pred cccCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCCc---------cCC
Q 018375 179 KIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADT---------VTD 249 (357)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~---------~~~ 249 (357)
.. ......--+..+|+++|...-+. ..|
T Consensus 142 ------~v-------------------------------------~~~~p~s~~~~~P~lviGtGLg~~~~~~~~~~CaP 178 (259)
T PF12740_consen 142 ------PV-------------------------------------LTYTPQSFDFSMPALVIGTGLGGEPRNPLFPPCAP 178 (259)
T ss_pred ------cc-------------------------------------ccCcccccCCCCCeEEEecccCcccccccCCCCCC
Confidence 00 00001112245899999766663 222
Q ss_pred h-HHHHHHHHHccCCCceEEEcCCCCcccccCCC
Q 018375 250 P-EVSKALYERASSRDKTIKLYPGMWHALTSGEP 282 (357)
Q Consensus 250 ~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p 282 (357)
. ..-++++..+.. .+-.++..+.||.-+++..
T Consensus 179 ~g~n~~~Ff~~~~~-p~~~~v~~~~GH~d~LDd~ 211 (259)
T PF12740_consen 179 AGVNYREFFDECKP-PSWHFVAKDYGHMDFLDDD 211 (259)
T ss_pred CCCCHHHHHHhcCC-CEEEEEeCCCCchHhhcCC
Confidence 2 245677888874 6777777999999888665
No 107
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.62 E-value=8.4e-14 Score=105.49 Aligned_cols=182 Identities=19% Similarity=0.189 Sum_probs=108.8
Q ss_pred EEEEccCCccccccH-HHHHHHHhhCC--cEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEEE
Q 018375 45 VFLCHGYGMECSGFM-RECGTRLASAG--YAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFL 121 (357)
Q Consensus 45 vv~lHG~~~~~~~~~-~~~~~~l~~~G--~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l 121 (357)
||++||+.++..... ..+.+.+.+.+ ..+.++|++. ..+...+.+.++++.. ..+.+.|
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~------------~p~~a~~~l~~~i~~~------~~~~~~l 63 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPP------------FPEEAIAQLEQLIEEL------KPENVVL 63 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCc------------CHHHHHHHHHHHHHhC------CCCCeEE
Confidence 799999998866542 34455666654 4567777653 4555666777777776 4556999
Q ss_pred EEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHHHHHhhcccCcccCccccchhhccChhHHHHHh
Q 018375 122 YGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTRVEEIIPKWKIVPTKDVIDSAFKDSIKREEIR 201 (357)
Q Consensus 122 vG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (357)
+|.|+||+.|..++.+++ +++ |+++|...+... +...+......... +.+.-...
T Consensus 64 iGSSlGG~~A~~La~~~~--~~a-vLiNPav~p~~~-------------l~~~iG~~~~~~~~---e~~~~~~~------ 118 (187)
T PF05728_consen 64 IGSSLGGFYATYLAERYG--LPA-VLINPAVRPYEL-------------LQDYIGEQTNPYTG---ESYELTEE------ 118 (187)
T ss_pred EEEChHHHHHHHHHHHhC--CCE-EEEcCCCCHHHH-------------HHHhhCccccCCCC---ccceechH------
Confidence 999999999999998886 444 899998764321 11111110000000 00000000
Q ss_pred hcccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCCccCChHHHHHHHHHccCCCceEEEcCCCCcccccCC
Q 018375 202 NNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYERASSRDKTIKLYPGMWHALTSGE 281 (357)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 281 (357)
.......+......-..+++++.++.|.+++...+... .. ++..++.+|++|.+.
T Consensus 119 -----------------~~~~l~~l~~~~~~~~~~~lvll~~~DEvLd~~~a~~~---~~--~~~~~i~~ggdH~f~--- 173 (187)
T PF05728_consen 119 -----------------HIEELKALEVPYPTNPERYLVLLQTGDEVLDYREAVAK---YR--GCAQIIEEGGDHSFQ--- 173 (187)
T ss_pred -----------------hhhhcceEeccccCCCccEEEEEecCCcccCHHHHHHH---hc--CceEEEEeCCCCCCc---
Confidence 00000000001122356899999999999999655443 32 455667788899885
Q ss_pred CChhhhhHHHHHHHHH
Q 018375 282 PDENIDIVFGDIIAWL 297 (357)
Q Consensus 282 p~~~~~~~~~~i~~fl 297 (357)
..++....|.+|+
T Consensus 174 ---~f~~~l~~i~~f~ 186 (187)
T PF05728_consen 174 ---DFEEYLPQIIAFL 186 (187)
T ss_pred ---cHHHHHHHHHHhh
Confidence 2334788888886
No 108
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.62 E-value=1.6e-13 Score=96.65 Aligned_cols=193 Identities=15% Similarity=0.212 Sum_probs=127.7
Q ss_pred EEcCCCCCceEEEEEccCCcccc-ccHHHHHHHHhhCCcEEEEeCCCCC-----ccCCCCCccccchhhHHHHHHHHHHH
Q 018375 34 RWLPFSTPKAVVFLCHGYGMECS-GFMRECGTRLASAGYAVFGIDYEGH-----GRSRGARCYIKKFENIVNDCDDFFKS 107 (357)
Q Consensus 34 ~~~p~~~~~p~vv~lHG~~~~~~-~~~~~~~~~l~~~G~~vi~~d~~G~-----G~s~~~~~~~~~~~~~~~d~~~~l~~ 107 (357)
.+.|.+....+||+.||.+.+.. .++..++..|+.+|+.|..++++.. |...+++....-...+...+.++-..
T Consensus 6 ~~~pag~~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~ 85 (213)
T COG3571 6 LFDPAGPAPVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAG 85 (213)
T ss_pred ccCCCCCCCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhc
Confidence 34455566678999999887644 3468899999999999999999854 32222222211223444444444444
Q ss_pred HHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHHHHHhhcccCcccCccccc
Q 018375 108 VCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTRVEEIIPKWKIVPTKDVI 187 (357)
Q Consensus 108 l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (357)
+ ...++++-|+||||-++.+++..-.-.|+++++++-++.......
T Consensus 86 l------~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKPe---------------------------- 131 (213)
T COG3571 86 L------AEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKPE---------------------------- 131 (213)
T ss_pred c------cCCceeeccccccchHHHHHHHhhcCCcceEEEecCccCCCCCcc----------------------------
Confidence 4 567899999999999999998755445999998875443221100
Q ss_pred hhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCCccCChHHHHHHHHHccCCCceE
Q 018375 188 DSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYERASSRDKTI 267 (357)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~ 267 (357)
..-.+.+..+++|+||++|+.|++-..+++... .+ ++..++
T Consensus 132 ------------------------------------~~Rt~HL~gl~tPtli~qGtrD~fGtr~~Va~y--~l-s~~iev 172 (213)
T COG3571 132 ------------------------------------QLRTEHLTGLKTPTLITQGTRDEFGTRDEVAGY--AL-SDPIEV 172 (213)
T ss_pred ------------------------------------cchhhhccCCCCCeEEeecccccccCHHHHHhh--hc-CCceEE
Confidence 011245777899999999999999887765322 22 258999
Q ss_pred EEcCCCCcccccCC------CChhhhhHHHHHHHHHHH
Q 018375 268 KLYPGMWHALTSGE------PDENIDIVFGDIIAWLDE 299 (357)
Q Consensus 268 ~~~~~~gH~~~~~~------p~~~~~~~~~~i~~fl~~ 299 (357)
++++++.|.+--.. .+.......+.|..|...
T Consensus 173 ~wl~~adHDLkp~k~vsgls~~~hL~~~A~~va~~~~~ 210 (213)
T COG3571 173 VWLEDADHDLKPRKLVSGLSTADHLKTLAEQVAGWARR 210 (213)
T ss_pred EEeccCccccccccccccccHHHHHHHHHHHHHHHHhh
Confidence 99999999874211 112234456667777654
No 109
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.61 E-value=1e-12 Score=108.27 Aligned_cols=242 Identities=18% Similarity=0.232 Sum_probs=144.4
Q ss_pred eeEEecCCcEEEEEEEcC---CC-CCceEEEEEccCCcc-----ccccHHHHHHHHh-hCCcEEEEeCCCCCccCCCCCc
Q 018375 20 EYIRNARGVQLFTCRWLP---FS-TPKAVVFLCHGYGME-----CSGFMRECGTRLA-SAGYAVFGIDYEGHGRSRGARC 89 (357)
Q Consensus 20 ~~~~~~~g~~l~~~~~~p---~~-~~~p~vv~lHG~~~~-----~~~~~~~~~~~l~-~~G~~vi~~d~~G~G~s~~~~~ 89 (357)
..+.......|..++|.| .. ...|.||++||.|.- ...| ..+...++ +.+..|+.+|||=..+..-+.
T Consensus 64 ~dv~~~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y-~~~~~~~a~~~~~vvvSVdYRLAPEh~~Pa- 141 (336)
T KOG1515|consen 64 KDVTIDPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAY-DSFCTRLAAELNCVVVSVDYRLAPEHPFPA- 141 (336)
T ss_pred eeeEecCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchh-HHHHHHHHHHcCeEEEecCcccCCCCCCCc-
Confidence 344455566788999999 23 567999999997642 2233 67777774 448899999999765554333
Q ss_pred cccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcC------CCcccEEEEeccccccccccCChhH
Q 018375 90 YIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKD------PSFWNGAVLVAPMCKISEKVKPHPV 163 (357)
Q Consensus 90 ~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~------p~~v~~~vl~~~~~~~~~~~~~~~~ 163 (357)
.+++..+.+.-+++....+.+.+.++|.|+|-|.||.+|..+|.+. +.++++.|++.|.....+.......
T Consensus 142 ---~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~ 218 (336)
T KOG1515|consen 142 ---AYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQ 218 (336)
T ss_pred ---cchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHH
Confidence 3344444444444421113456788999999999999998888532 3579999999998876544322111
Q ss_pred ----------HHHHHHHHHhhcccCcccCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCc
Q 018375 164 ----------LVNILTRVEEIIPKWKIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKV 233 (357)
Q Consensus 164 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 233 (357)
.......+...++.... ....+... ... ........-.
T Consensus 219 ~~~~~~~~~~~~~~~~~w~~~lP~~~~-------------------~~~~p~~n-----------p~~--~~~~~d~~~~ 266 (336)
T KOG1515|consen 219 QNLNGSPELARPKIDKWWRLLLPNGKT-------------------DLDHPFIN-----------PVG--NSLAKDLSGL 266 (336)
T ss_pred HhhcCCcchhHHHHHHHHHHhCCCCCC-------------------CcCCcccc-----------ccc--cccccCcccc
Confidence 00000000111110000 00000000 000 0000122223
Q ss_pred cc-cEEEEeeCCCccCChHHHHHHHHHccC--CCceEEEcCCCCcccccCCCC-hhhhhHHHHHHHHHHHh
Q 018375 234 MI-PFFVLHGEADTVTDPEVSKALYERASS--RDKTIKLYPGMWHALTSGEPD-ENIDIVFGDIIAWLDER 300 (357)
Q Consensus 234 ~~-Pvl~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p~-~~~~~~~~~i~~fl~~~ 300 (357)
.+ |+|++.++.|.+.. ....+.+++.. ..+++..++++.|.+++-.+. ....++.+.|.+|+++.
T Consensus 267 ~lp~tlv~~ag~D~L~D--~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 267 GLPPTLVVVAGYDVLRD--EGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred CCCceEEEEeCchhhhh--hhHHHHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 34 59999999998874 44445555544 355667899999999877775 56777899999999764
No 110
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.60 E-value=7.9e-15 Score=134.94 Aligned_cols=229 Identities=10% Similarity=0.093 Sum_probs=135.3
Q ss_pred HHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhh--------------hccCCccEEEEEeCh
Q 018375 61 ECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQ--------------EEYTDKARFLYGESM 126 (357)
Q Consensus 61 ~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~--------------~~~~~~~v~lvG~S~ 126 (357)
.+.++|+++||.|+.+|.||.|.|++.... ...+..+|..++|+|+..+ ..+...+|.++|.|+
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~--~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY 347 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPTT--GDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSY 347 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCcc--CCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcH
Confidence 456889999999999999999999986432 2256788999999999742 223468999999999
Q ss_pred hHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHH---HH----HHHHHhhcccCcccCccccchhhccC-hhHHH
Q 018375 127 GGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLV---NI----LTRVEEIIPKWKIVPTKDVIDSAFKD-SIKRE 198 (357)
Q Consensus 127 Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 198 (357)
||.+++.+|...|..++++|..++..+..+......... .+ ...+........... ...... +....
T Consensus 348 ~G~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~~-----~~~~~~~~~~~~ 422 (767)
T PRK05371 348 LGTLPNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLLA-----GDYLRHNEACEK 422 (767)
T ss_pred HHHHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcccCc-----chhhcchHHHHH
Confidence 999999999988888999999888765332110000000 00 000000000000000 000000 00000
Q ss_pred HHhhccccc-CCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCCccCChHHHHHHHHHccC--CCceEEEcCCCCc
Q 018375 199 EIRNNKLIY-QDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYERASS--RDKTIKLYPGMWH 275 (357)
Q Consensus 199 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH 275 (357)
......... ....... .+....+....+.+|++|+|+++|..|..+++..+.++++.+.. .+.++.+.+ .+|
T Consensus 423 ~~~~~~~~~~~~~~~y~----~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~-g~H 497 (767)
T PRK05371 423 LLAELTAAQDRKTGDYN----DFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQ-GGH 497 (767)
T ss_pred HHhhhhhhhhhcCCCcc----HHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeC-CCc
Confidence 000000000 0000000 00111234456788999999999999999999888888888753 346665555 578
Q ss_pred ccccCCCChhhhhHHHHHHHHHHHhcccc
Q 018375 276 ALTSGEPDENIDIVFGDIIAWLDERMSDA 304 (357)
Q Consensus 276 ~~~~~~p~~~~~~~~~~i~~fl~~~~~~~ 304 (357)
...... ...++.+.+.+|+..++...
T Consensus 498 ~~~~~~---~~~d~~e~~~~Wfd~~LkG~ 523 (767)
T PRK05371 498 VYPNNW---QSIDFRDTMNAWFTHKLLGI 523 (767)
T ss_pred cCCCch---hHHHHHHHHHHHHHhccccC
Confidence 643211 12347888999999988754
No 111
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.59 E-value=3.7e-14 Score=112.38 Aligned_cols=102 Identities=24% Similarity=0.349 Sum_probs=74.2
Q ss_pred EEEEccCCcccc--ccHHHHHHHHhh-CCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhh---hccCCcc
Q 018375 45 VFLCHGYGMECS--GFMRECGTRLAS-AGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQ---EEYTDKA 118 (357)
Q Consensus 45 vv~lHG~~~~~~--~~~~~~~~~l~~-~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~---~~~~~~~ 118 (357)
||++||.+.... .....++..+++ .|+.|+.+|||-..+ ..+.+..+|+.++++++.++ .+.+.++
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~--------~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~ 72 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPE--------APFPAALEDVKAAYRWLLKNADKLGIDPER 72 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTT--------SSTTHHHHHHHHHHHHHHHTHHHHTEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccccc--------ccccccccccccceeeeccccccccccccc
Confidence 799999765322 223566677765 799999999995422 26778899999999999775 3457889
Q ss_pred EEEEEeChhHHHHHHHHhcCCC----cccEEEEecccccc
Q 018375 119 RFLYGESMGGAVTLLLHKKDPS----FWNGAVLVAPMCKI 154 (357)
Q Consensus 119 v~lvG~S~Gg~~a~~~a~~~p~----~v~~~vl~~~~~~~ 154 (357)
|+|+|+|.||.+++.++....+ .++++++++|..+.
T Consensus 73 i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 73 IVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred eEEeecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 9999999999999999864322 48999999997655
No 112
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.58 E-value=1.6e-13 Score=110.21 Aligned_cols=216 Identities=17% Similarity=0.260 Sum_probs=126.9
Q ss_pred eEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEEEE
Q 018375 43 AVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLY 122 (357)
Q Consensus 43 p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lv 122 (357)
++|+++|+.+++...| ..+++.|....+.|+.++++|.+.... ...++++++++..+.|.... +..++.|+
T Consensus 1 ~~lf~~p~~gG~~~~y-~~la~~l~~~~~~v~~i~~~~~~~~~~---~~~si~~la~~y~~~I~~~~-----~~gp~~L~ 71 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSY-RPLARALPDDVIGVYGIEYPGRGDDEP---PPDSIEELASRYAEAIRARQ-----PEGPYVLA 71 (229)
T ss_dssp -EEEEESSTTCSGGGG-HHHHHHHTTTEEEEEEECSTTSCTTSH---EESSHHHHHHHHHHHHHHHT-----SSSSEEEE
T ss_pred CeEEEEcCCccCHHHH-HHHHHhCCCCeEEEEEEecCCCCCCCC---CCCCHHHHHHHHHHHhhhhC-----CCCCeeeh
Confidence 3699999999987777 899999976458999999999983222 22388888888887777662 23499999
Q ss_pred EeChhHHHHHHHHhc---CCCcccEEEEeccccccccccCC--hhHHHHHHHHHHhhcccCcccCccccchhhccChhHH
Q 018375 123 GESMGGAVTLLLHKK---DPSFWNGAVLVAPMCKISEKVKP--HPVLVNILTRVEEIIPKWKIVPTKDVIDSAFKDSIKR 197 (357)
Q Consensus 123 G~S~Gg~~a~~~a~~---~p~~v~~~vl~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (357)
|||+||.+|..+|.+ ....+..++++++.......... ..........+...... .
T Consensus 72 G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~ 132 (229)
T PF00975_consen 72 GWSFGGILAFEMARQLEEAGEEVSRLILIDSPPPSIKERPRSREPSDEQFIEELRRIGGT-------------------P 132 (229)
T ss_dssp EETHHHHHHHHHHHHHHHTT-SESEEEEESCSSTTCHSCHHHHHCHHHHHHHHHHHHCHH-------------------H
T ss_pred ccCccHHHHHHHHHHHHHhhhccCceEEecCCCCCcccchhhhhhhHHHHHHHHHHhcCC-------------------c
Confidence 999999999999954 23459999999965442211000 00000011111111000 0
Q ss_pred HHHhhcccccCCccchHHHHHHHHhhhhHhhc--cCCc---cccEEEEeeCCCccCChH---HHHHHHHHccCCCceEEE
Q 018375 198 EEIRNNKLIYQDKPRLKTALEMLRTSMSLEDS--LSKV---MIPFFVLHGEADTVTDPE---VSKALYERASSRDKTIKL 269 (357)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i---~~Pvl~i~g~~D~~~~~~---~~~~~~~~~~~~~~~~~~ 269 (357)
.... .....+......+......... ...+ .+|.++.....|+..... ....+.+... ..++++.
T Consensus 133 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~-~~~~~~~ 205 (229)
T PF00975_consen 133 DASL------EDEELLARLLRALRDDFQALENYSIRPIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTS-GDVEVHD 205 (229)
T ss_dssp HHHC------HHHHHHHHHHHHHHHHHHHHHTCS-TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBS-SSEEEEE
T ss_pred hhhh------cCHHHHHHHHHHHHHHHHHHhhccCCccccCCCcEEEEecCCCccccchhhhhHHHHHHhcC-CCcEEEE
Confidence 0000 0000011111111111111111 1111 457889999999888766 2333444444 4678888
Q ss_pred cCCCCcccccCCCChhhhhHHHHHHHHH
Q 018375 270 YPGMWHALTSGEPDENIDIVFGDIIAWL 297 (357)
Q Consensus 270 ~~~~gH~~~~~~p~~~~~~~~~~i~~fl 297 (357)
++| +|+.++. +. ..++.+.|.+||
T Consensus 206 v~G-~H~~~l~-~~--~~~i~~~I~~~~ 229 (229)
T PF00975_consen 206 VPG-DHFSMLK-PH--VAEIAEKIAEWL 229 (229)
T ss_dssp ESS-ETTGHHS-TT--HHHHHHHHHHHH
T ss_pred EcC-CCcEecc-hH--HHHHHHHHhccC
Confidence 886 9999987 32 445777777765
No 113
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.58 E-value=1.1e-13 Score=127.01 Aligned_cols=230 Identities=19% Similarity=0.222 Sum_probs=154.7
Q ss_pred CCcEEEEEEEcC----CCCCceEEEEEccCCcccc---ccHHHHHH-HHhhCCcEEEEeCCCCCccCCCCCcc--ccch-
Q 018375 26 RGVQLFTCRWLP----FSTPKAVVFLCHGYGMECS---GFMRECGT-RLASAGYAVFGIDYEGHGRSRGARCY--IKKF- 94 (357)
Q Consensus 26 ~g~~l~~~~~~p----~~~~~p~vv~lHG~~~~~~---~~~~~~~~-~l~~~G~~vi~~d~~G~G~s~~~~~~--~~~~- 94 (357)
+|..+.+....| ..++.|.||.+||.+++.. .+...+.. .+...|+.|+.+|.||.|........ ...+
T Consensus 506 ~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG 585 (755)
T KOG2100|consen 506 DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLG 585 (755)
T ss_pred ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHHHhhhhcC
Confidence 899999999998 4456899999999986322 12122233 35567999999999998766543210 0011
Q ss_pred hhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCC-CcccEEEEeccccccccccCChhHHHHHHHHHHh
Q 018375 95 ENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDP-SFWNGAVLVAPMCKISEKVKPHPVLVNILTRVEE 173 (357)
Q Consensus 95 ~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p-~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (357)
...++|...+++.+.+..-++..++.++|+|+||++++.++...| +.+++.+.++|+.+.. ....
T Consensus 586 ~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~-~yds------------- 651 (755)
T KOG2100|consen 586 DVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL-YYDS------------- 651 (755)
T ss_pred CcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee-eecc-------------
Confidence 123677788888877776678899999999999999999999998 4566669999987643 1000
Q ss_pred hcccCcccCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccE-EEEeeCCCccCChHH
Q 018375 174 IIPKWKIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPF-FVLHGEADTVTDPEV 252 (357)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pv-l~i~g~~D~~~~~~~ 252 (357)
....++...+.... .. .........+..++.|. |++||+.|..|+.++
T Consensus 652 -----------~~terymg~p~~~~----------------~~----y~e~~~~~~~~~~~~~~~LliHGt~DdnVh~q~ 700 (755)
T KOG2100|consen 652 -----------TYTERYMGLPSEND----------------KG----YEESSVSSPANNIKTPKLLLIHGTEDDNVHFQQ 700 (755)
T ss_pred -----------cccHhhcCCCcccc----------------ch----hhhccccchhhhhccCCEEEEEcCCcCCcCHHH
Confidence 00000000000000 00 00112233455566665 999999999999999
Q ss_pred HHHHHHHccC--CCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHHhccc
Q 018375 253 SKALYERASS--RDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDERMSD 303 (357)
Q Consensus 253 ~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~~~ 303 (357)
+..+.+++.. ...++.++|+.+|.+.... ....+...+..|+..+...
T Consensus 701 s~~~~~aL~~~gv~~~~~vypde~H~is~~~---~~~~~~~~~~~~~~~~~~~ 750 (755)
T KOG2100|consen 701 SAILIKALQNAGVPFRLLVYPDENHGISYVE---VISHLYEKLDRFLRDCFGS 750 (755)
T ss_pred HHHHHHHHHHCCCceEEEEeCCCCccccccc---chHHHHHHHHHHHHHHcCc
Confidence 9999988865 3478999999999987422 2344889999999976654
No 114
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.57 E-value=7.1e-14 Score=108.41 Aligned_cols=122 Identities=19% Similarity=0.237 Sum_probs=86.3
Q ss_pred EEEEEEcCCC---CCceEEEEEccCCccccccHH--HHHHHHh-hCCcEEEEeCCCCCccCCCC----CccccchhhHHH
Q 018375 30 LFTCRWLPFS---TPKAVVFLCHGYGMECSGFMR--ECGTRLA-SAGYAVFGIDYEGHGRSRGA----RCYIKKFENIVN 99 (357)
Q Consensus 30 l~~~~~~p~~---~~~p~vv~lHG~~~~~~~~~~--~~~~~l~-~~G~~vi~~d~~G~G~s~~~----~~~~~~~~~~~~ 99 (357)
|.|++|.|.+ .+.|.||++||.+.+...+.. .+ ..++ ++||.|+.++.........- ......-...+.
T Consensus 1 l~Y~lYvP~~~~~~~~PLVv~LHG~~~~a~~~~~~s~~-~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~ 79 (220)
T PF10503_consen 1 LSYRLYVPPGAPRGPVPLVVVLHGCGQSAEDFAAGSGW-NALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVA 79 (220)
T ss_pred CcEEEecCCCCCCCCCCEEEEeCCCCCCHHHHHhhcCH-HHHhhcCCeEEEcccccccCCCCCcccccccccccCccchh
Confidence 5789999942 356999999999988665422 12 2344 45899999986432111100 000001123355
Q ss_pred HHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEecccc
Q 018375 100 DCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMC 152 (357)
Q Consensus 100 d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 152 (357)
.|..+++++..+..++..+|.+.|+|.||.++..++..+|+.|.++...++..
T Consensus 80 ~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 80 FIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVP 132 (220)
T ss_pred hHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccc
Confidence 67788888888888899999999999999999999999999999998887754
No 115
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.57 E-value=1e-12 Score=110.37 Aligned_cols=235 Identities=21% Similarity=0.243 Sum_probs=137.6
Q ss_pred ecCCcEEEEEEEcC--C-CCCceEEEEEccCCccc---cccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhH
Q 018375 24 NARGVQLFTCRWLP--F-STPKAVVFLCHGYGMEC---SGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENI 97 (357)
Q Consensus 24 ~~~g~~l~~~~~~p--~-~~~~p~vv~lHG~~~~~---~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~ 97 (357)
..++..+.+++|.| . ..+.|+||++||.+... ......+...+...|+.|+.+|||-..+- .+...
T Consensus 58 ~~~~~~~~~~~y~p~~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~--------~~p~~ 129 (312)
T COG0657 58 GPSGDGVPVRVYRPDRKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEH--------PFPAA 129 (312)
T ss_pred CCCCCceeEEEECCCCCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCC--------CCCch
Confidence 33455577889987 2 23479999999976532 22224555566677999999999965433 45566
Q ss_pred HHHHHHHHHHHHhh---hccCCccEEEEEeChhHHHHHHHHhcCCC----cccEEEEeccccccccccCChhHHHHHHHH
Q 018375 98 VNDCDDFFKSVCAQ---EEYTDKARFLYGESMGGAVTLLLHKKDPS----FWNGAVLVAPMCKISEKVKPHPVLVNILTR 170 (357)
Q Consensus 98 ~~d~~~~l~~l~~~---~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~----~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~ 170 (357)
++|+.++++++.++ .+.+.++|.++|+|.||.+++.++....+ ...+.+++.|..+... ......
T Consensus 130 ~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~-~~~~~~------- 201 (312)
T COG0657 130 LEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS-SAASLP------- 201 (312)
T ss_pred HHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc-cccchh-------
Confidence 77888888888764 34568899999999999999999865432 4789999999877653 100000
Q ss_pred HHhhcccCcccCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHh-hccCCccccEEEEeeCCCccCC
Q 018375 171 VEEIIPKWKIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLE-DSLSKVMIPFFVLHGEADTVTD 249 (357)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~Pvl~i~g~~D~~~~ 249 (357)
.... .......................... +. ...+. ..+.. -.|+++++|+.|.+.+
T Consensus 202 --~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~-p~----------~spl~~~~~~~-lPP~~i~~a~~D~l~~ 260 (312)
T COG0657 202 --GYGE-------ADLLDAAAILAWFADLYLGAAPDRED-PE----------ASPLASDDLSG-LPPTLIQTAEFDPLRD 260 (312)
T ss_pred --hcCC-------ccccCHHHHHHHHHHHhCcCccccCC-Cc----------cCccccccccC-CCCEEEEecCCCcchh
Confidence 0000 00000000000000000000000000 00 00000 11333 4689999999999988
Q ss_pred hHHHHHHHHHccC--CCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHH
Q 018375 250 PEVSKALYERASS--RDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLD 298 (357)
Q Consensus 250 ~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~ 298 (357)
+...+.+++.. ..+++..+++..|.+..-.. ....+....+.+|+.
T Consensus 261 --~~~~~a~~L~~agv~~~~~~~~g~~H~f~~~~~-~~a~~~~~~~~~~l~ 308 (312)
T COG0657 261 --EGEAYAERLRAAGVPVELRVYPGMIHGFDLLTG-PEARSALRQIAAFLR 308 (312)
T ss_pred --HHHHHHHHHHHcCCeEEEEEeCCcceeccccCc-HHHHHHHHHHHHHHH
Confidence 44455555443 46788999999997753333 223444667777776
No 116
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.55 E-value=4.4e-13 Score=114.81 Aligned_cols=232 Identities=17% Similarity=0.159 Sum_probs=147.7
Q ss_pred eeeeEEecCCcEEEEEEEcC----CCCCceEEEEEccCCcccc---cc--HHH-HHHHHhhCCcEEEEeCCCCCccCCCC
Q 018375 18 QEEYIRNARGVQLFTCRWLP----FSTPKAVVFLCHGYGMECS---GF--MRE-CGTRLASAGYAVFGIDYEGHGRSRGA 87 (357)
Q Consensus 18 ~~~~~~~~~g~~l~~~~~~p----~~~~~p~vv~lHG~~~~~~---~~--~~~-~~~~l~~~G~~vi~~d~~G~G~s~~~ 87 (357)
+...|.+..|..++..+|.| .+++.|+|+++-|.++-.- .| ... =...|+..||.|+++|-||.-.....
T Consensus 614 eif~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlk 693 (867)
T KOG2281|consen 614 EIFSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLK 693 (867)
T ss_pred hheeeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchh
Confidence 44566777889999999999 4567899999999876321 11 111 13567889999999999996544322
Q ss_pred C--------ccccchhhHHHHHHHHHHHHHhhhc-cCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEecccccccccc
Q 018375 88 R--------CYIKKFENIVNDCDDFFKSVCAQEE-YTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKV 158 (357)
Q Consensus 88 ~--------~~~~~~~~~~~d~~~~l~~l~~~~~-~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~ 158 (357)
. +. ..++ |-.+-+++|.++.+ ++.++|.|-|||+||++++....++|+.++..|.-+|+.....-
T Consensus 694 FE~~ik~kmGq-VE~e----DQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~~Y- 767 (867)
T KOG2281|consen 694 FESHIKKKMGQ-VEVE----DQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWRLY- 767 (867)
T ss_pred hHHHHhhccCe-eeeh----hhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeeeee-
Confidence 1 11 1334 44445555555543 36789999999999999999999999988888887776542110
Q ss_pred CChhHHHHHHHHHHhhcccCcccCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEE
Q 018375 159 KPHPVLVNILTRVEEIIPKWKIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFF 238 (357)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl 238 (357)
. ..+.++++.-+...+. .|. ... .....+.+..-....|
T Consensus 768 -----------------------D-TgYTERYMg~P~~nE~------gY~----agS-------V~~~VeklpdepnRLl 806 (867)
T KOG2281|consen 768 -----------------------D-TGYTERYMGYPDNNEH------GYG----AGS-------VAGHVEKLPDEPNRLL 806 (867)
T ss_pred -----------------------c-ccchhhhcCCCccchh------ccc----chh-------HHHHHhhCCCCCceEE
Confidence 0 0111111111100000 000 000 0111223333345689
Q ss_pred EEeeCCCccCChHHHHHHHHHccC--CCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHH
Q 018375 239 VLHGEADTVTDPEVSKALYERASS--RDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDE 299 (357)
Q Consensus 239 ~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~ 299 (357)
++||--|..|...+...+...+-. ...++.+||+.-|.+-- |+. ...+-..+..|+++
T Consensus 807 LvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~--~es-~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 807 LVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRN--PES-GIYYEARLLHFLQE 866 (867)
T ss_pred EEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCC--Ccc-chhHHHHHHHHHhh
Confidence 999999999998887777776643 46799999999998753 332 33366778888875
No 117
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.51 E-value=9.1e-13 Score=105.87 Aligned_cols=121 Identities=16% Similarity=0.132 Sum_probs=96.7
Q ss_pred EecCCcEEEEEEEcCC----CCCceEEEEEccCCccccccHHHHHHHHhhC---C------cEEEEeCCCCCccCCCCCc
Q 018375 23 RNARGVQLFTCRWLPF----STPKAVVFLCHGYGMECSGFMRECGTRLASA---G------YAVFGIDYEGHGRSRGARC 89 (357)
Q Consensus 23 ~~~~g~~l~~~~~~p~----~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~---G------~~vi~~d~~G~G~s~~~~~ 89 (357)
+...|.+|++....|. .+...+|+++|||+++-..|+ .++..|.+. | |.||++.+||+|.|+.+..
T Consensus 129 TeIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFy-kfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk 207 (469)
T KOG2565|consen 129 TEIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFY-KFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSK 207 (469)
T ss_pred hhhcceeEEEEEecCCccccCCcccceEEecCCCchHHHHH-hhhhhhcCccccCCccceeEEEeccCCCCcccCcCCcc
Confidence 4557999999888772 222346999999999977774 677777654 2 8999999999999998876
Q ss_pred cccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEecc
Q 018375 90 YIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAP 150 (357)
Q Consensus 90 ~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~ 150 (357)
...+....+.-+..++-.| +.+++.|-|..||+.++..+|..+|+.|.|+-+-.+
T Consensus 208 ~GFn~~a~ArvmrkLMlRL------g~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~ 262 (469)
T KOG2565|consen 208 TGFNAAATARVMRKLMLRL------GYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMC 262 (469)
T ss_pred CCccHHHHHHHHHHHHHHh------CcceeEeecCchHHHHHHHHHhhcchhhhHhhhccc
Confidence 6556666777777777666 789999999999999999999999999988765443
No 118
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.51 E-value=7.3e-13 Score=112.44 Aligned_cols=190 Identities=19% Similarity=0.232 Sum_probs=106.9
Q ss_pred CCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccC------CC-----C-------C------ccc----
Q 018375 40 TPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRS------RG-----A-------R------CYI---- 91 (357)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s------~~-----~-------~------~~~---- 91 (357)
++.|+|||-||++++...| ..++..||.+||.|+++|.|..-.. +. . . ...
T Consensus 98 ~~~PvvIFSHGlgg~R~~y-S~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSY-SAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEE 176 (379)
T ss_dssp S-EEEEEEE--TT--TTTT-HHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGG
T ss_pred CCCCEEEEeCCCCcchhhH-HHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchh
Confidence 6689999999999998777 8999999999999999999953111 00 0 0 000
Q ss_pred -c-----chhhHHHHHHHHHHHHHhhh--------------------ccCCccEEEEEeChhHHHHHHHHhcCCCcccEE
Q 018375 92 -K-----KFENIVNDCDDFFKSVCAQE--------------------EYTDKARFLYGESMGGAVTLLLHKKDPSFWNGA 145 (357)
Q Consensus 92 -~-----~~~~~~~d~~~~l~~l~~~~--------------------~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~ 145 (357)
. .++.-++|+..+++.+.+.. ..+..+++++|||+||..++..+.+. .++++.
T Consensus 177 ~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~ 255 (379)
T PF03403_consen 177 EFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAG 255 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceE
Confidence 0 01122446667776664311 12356799999999999999988776 569999
Q ss_pred EEeccccccccccCChhHHHHHHHHHHhhcccCcccCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhh
Q 018375 146 VLVAPMCKISEKVKPHPVLVNILTRVEEIIPKWKIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMS 225 (357)
Q Consensus 146 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (357)
|+++|+..+.. .
T Consensus 256 I~LD~W~~Pl~-------------------------------------------------------------------~- 267 (379)
T PF03403_consen 256 ILLDPWMFPLG-------------------------------------------------------------------D- 267 (379)
T ss_dssp EEES---TTS--------------------------------------------------------------------G-
T ss_pred EEeCCcccCCC-------------------------------------------------------------------c-
Confidence 99998753110 0
Q ss_pred HhhccCCccccEEEEeeCCCccCChHHHHHHHHHccC-CCceEEEcCCCCcccccC-------------------CCChh
Q 018375 226 LEDSLSKVMIPFFVLHGEADTVTDPEVSKALYERASS-RDKTIKLYPGMWHALTSG-------------------EPDEN 285 (357)
Q Consensus 226 ~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~-------------------~p~~~ 285 (357)
+....++.|+|+|..+. +.-......+.+.... .+..++.+.|+.|..+-+ +|...
T Consensus 268 --~~~~~i~~P~L~InSe~--f~~~~~~~~~~~~~~~~~~~~~~ti~gt~H~s~sD~~ll~P~~l~~~~~~~g~~dp~~a 343 (379)
T PF03403_consen 268 --EIYSKIPQPLLFINSES--FQWWENIFRMKKVISNNKESRMLTIKGTAHLSFSDFPLLSPWLLGKFLGLKGSIDPERA 343 (379)
T ss_dssp --GGGGG--S-EEEEEETT--T--HHHHHHHHTT--TTS-EEEEEETT--GGGGSGGGGTS-HHHHHHTTSS-SS-HHHH
T ss_pred --ccccCCCCCEEEEECcc--cCChhhHHHHHHHhccCCCcEEEEECCCcCCCcchhhhhhHHHHHHHhccccCcCHHHH
Confidence 11134678999998775 2233333333332222 467889999999986532 34445
Q ss_pred hhhHHHHHHHHHHHhccc
Q 018375 286 IDIVFGDIIAWLDERMSD 303 (357)
Q Consensus 286 ~~~~~~~i~~fl~~~~~~ 303 (357)
.+...+.+.+||++++.-
T Consensus 344 ~~i~~~~~l~FL~~~L~~ 361 (379)
T PF03403_consen 344 LRINNRASLAFLRRHLGL 361 (379)
T ss_dssp HHHHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHHhcCC
Confidence 677788999999999763
No 119
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=99.50 E-value=8.4e-13 Score=114.06 Aligned_cols=138 Identities=18% Similarity=0.101 Sum_probs=109.5
Q ss_pred cceeeeeEEecCCcEEEEEEEcC-CCCCceEEEEEc--cCCcccc-cc-HHHHHH---HHhhCCcEEEEeCCCCCccCCC
Q 018375 15 VEYQEEYIRNARGVQLFTCRWLP-FSTPKAVVFLCH--GYGMECS-GF-MRECGT---RLASAGYAVFGIDYEGHGRSRG 86 (357)
Q Consensus 15 ~~~~~~~~~~~~g~~l~~~~~~p-~~~~~p~vv~lH--G~~~~~~-~~-~~~~~~---~l~~~G~~vi~~d~~G~G~s~~ 86 (357)
+...+..++..||++|+..+|.| ..++.|+++..+ .+.-... .+ ...... .++.+||.||..|.||.|.|++
T Consensus 17 ~~~~~v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG 96 (563)
T COG2936 17 YIERDVMVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEG 96 (563)
T ss_pred eeeeeeeEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCc
Confidence 55667889999999999999999 467789999988 3322210 11 122333 6888999999999999999998
Q ss_pred CCccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccc
Q 018375 87 ARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKIS 155 (357)
Q Consensus 87 ~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~ 155 (357)
......+ +.++|-.+.|+++.++.. ...+|..+|.|++|...+.+|+..|..+++++...+..+..
T Consensus 97 ~~~~~~~--~E~~Dg~D~I~Wia~QpW-sNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~y 162 (563)
T COG2936 97 VFDPESS--REAEDGYDTIEWLAKQPW-SNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDRY 162 (563)
T ss_pred ccceecc--ccccchhHHHHHHHhCCc-cCCeeeeecccHHHHHHHHHHhcCCchheeecccccccccc
Confidence 8765434 568899999999987544 67899999999999999999999888899999888877644
No 120
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.50 E-value=5.5e-12 Score=102.48 Aligned_cols=246 Identities=15% Similarity=0.067 Sum_probs=140.0
Q ss_pred EEEEEEcCC---CCCceEEEEEccCCccccccHHHH-HHHHhhCCcEEEEeCCCCCccCCCCCcc---ccch-------h
Q 018375 30 LFTCRWLPF---STPKAVVFLCHGYGMECSGFMREC-GTRLASAGYAVFGIDYEGHGRSRGARCY---IKKF-------E 95 (357)
Q Consensus 30 l~~~~~~p~---~~~~p~vv~lHG~~~~~~~~~~~~-~~~l~~~G~~vi~~d~~G~G~s~~~~~~---~~~~-------~ 95 (357)
-++....|. .+.+|++|.++|.|.+.-..-..+ +..|.+.|+..+.+..|-||...+.... ..+. .
T Consensus 77 a~~~~~~P~~~~~~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~ 156 (348)
T PF09752_consen 77 ARFQLLLPKRWDSPYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGR 156 (348)
T ss_pred eEEEEEECCccccCCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHh
Confidence 445555563 346899999999887532222234 7888888999999999999987543211 1112 2
Q ss_pred hHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccc---c-ccCChhHHHHHHHHH
Q 018375 96 NIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKIS---E-KVKPHPVLVNILTRV 171 (357)
Q Consensus 96 ~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~---~-~~~~~~~~~~~~~~~ 171 (357)
..+.+...++.|+..+ +..++.+.|.||||.+|...|...|..+..+-.+++..... + .+...-.+..+...+
T Consensus 157 ~~i~E~~~Ll~Wl~~~---G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~q~ 233 (348)
T PF09752_consen 157 ATILESRALLHWLERE---GYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSINWDALEKQF 233 (348)
T ss_pred HHHHHHHHHHHHHHhc---CCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCCCHHHHHHHh
Confidence 3456777888888554 56799999999999999999999998777666665543211 1 011100111111110
Q ss_pred HhhcccCcccCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCcccc-----EEEEeeCCCc
Q 018375 172 EEIIPKWKIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIP-----FFVLHGEADT 246 (357)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-----vl~i~g~~D~ 246 (357)
.. .... +................ ......-...........+....+.+..+| +.++.+++|.
T Consensus 234 ~~----~~~~---~~~~~~~~~~~~~~~~~-----~~~~~~~~Ea~~~m~~~md~~T~l~nf~~P~dp~~ii~V~A~~Da 301 (348)
T PF09752_consen 234 ED----TVYE---EEISDIPAQNKSLPLDS-----MEERRRDREALRFMRGVMDSFTHLTNFPVPVDPSAIIFVAAKNDA 301 (348)
T ss_pred cc----cchh---hhhcccccCcccccchh-----hccccchHHHHHHHHHHHHhhccccccCCCCCCCcEEEEEecCce
Confidence 00 0000 00000000000000000 000000022222222222333344444444 7889999999
Q ss_pred cCChHHHHHHHHHccCCCceEEEcCCCCccc-ccCCCChhhhhHHHHHHHHH
Q 018375 247 VTDPEVSKALYERASSRDKTIKLYPGMWHAL-TSGEPDENIDIVFGDIIAWL 297 (357)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~-~~~~p~~~~~~~~~~i~~fl 297 (357)
++|......+.+.. |++++..+++ ||.. ++-+.+. +.+.|.+-+
T Consensus 302 YVPr~~v~~Lq~~W--PGsEvR~l~g-GHVsA~L~~q~~----fR~AI~Daf 346 (348)
T PF09752_consen 302 YVPRHGVLSLQEIW--PGSEVRYLPG-GHVSAYLLHQEA----FRQAIYDAF 346 (348)
T ss_pred EechhhcchHHHhC--CCCeEEEecC-CcEEEeeechHH----HHHHHHHHh
Confidence 99999988988888 4899999997 9964 4445555 666666544
No 121
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.49 E-value=3.2e-12 Score=105.19 Aligned_cols=251 Identities=14% Similarity=0.126 Sum_probs=148.4
Q ss_pred CceEEEEEccCCcccccc----HHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHH-HHHHHHHHHHHhhhccC
Q 018375 41 PKAVVFLCHGYGMECSGF----MRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIV-NDCDDFFKSVCAQEEYT 115 (357)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~----~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~-~d~~~~l~~l~~~~~~~ 115 (357)
-+++++++|.+-.....+ -..++..|.++|+.|+.+++++-..+... .++++++ +.+...++.+.+.. +
T Consensus 106 ~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~----~~~edYi~e~l~~aid~v~~it--g 179 (445)
T COG3243 106 LKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAA----KNLEDYILEGLSEAIDTVKDIT--G 179 (445)
T ss_pred CCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhh----ccHHHHHHHHHHHHHHHHHHHh--C
Confidence 356799999976542222 25788999999999999999876666542 2677877 78888888875543 4
Q ss_pred CccEEEEEeChhHHHHHHHHhcCCCc-ccEEEEeccccccccccCChhHH-HHHHHHHHh------hcccCcc------c
Q 018375 116 DKARFLYGESMGGAVTLLLHKKDPSF-WNGAVLVAPMCKISEKVKPHPVL-VNILTRVEE------IIPKWKI------V 181 (357)
Q Consensus 116 ~~~v~lvG~S~Gg~~a~~~a~~~p~~-v~~~vl~~~~~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~------~ 181 (357)
.++|.++|+|.||.++..+++..+.+ |++++++.+..++.......-+. ...+..+.. .++.+.. .
T Consensus 180 ~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lpg~~ma~~F~mL 259 (445)
T COG3243 180 QKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILPGWYMAIVFFLL 259 (445)
T ss_pred ccccceeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhhhhccCCChHHHHHHHHhc
Confidence 68999999999999999999888877 99999998887776532211100 001111111 1111100 0
Q ss_pred Ccc-----ccchhhccCh----hHHHHHhhcccccCCccchHHHH-HHHHhhh---------hHhhccCCccccEEEEee
Q 018375 182 PTK-----DVIDSAFKDS----IKREEIRNNKLIYQDKPRLKTAL-EMLRTSM---------SLEDSLSKVMIPFFVLHG 242 (357)
Q Consensus 182 ~~~-----~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---------~~~~~~~~i~~Pvl~i~g 242 (357)
... .+...+.... .....+..+.... ........+ +.+.... ...-++.+|+||++++.|
T Consensus 260 rpndliw~~fV~nyl~ge~pl~fdllyWn~dst~~-~~~~~~~~Lrn~y~~N~l~~g~~~v~G~~VdL~~It~pvy~~a~ 338 (445)
T COG3243 260 RPNDLIWNYFVNNYLDGEQPLPFDLLYWNADSTRL-PGAAHSEYLRNFYLENRLIRGGLEVSGTMVDLGDITCPVYNLAA 338 (445)
T ss_pred CccccchHHHHHHhcCCCCCCchhHHHhhCCCccC-chHHHHHHHHHHHHhChhhccceEECCEEechhhcccceEEEee
Confidence 000 1111111110 0001111111000 011111111 1111111 111257889999999999
Q ss_pred CCCccCChHHHHHHHHHccCCCceEEEcCCCCccccc-CCCChhhhhHHH----HHHHHHHHh
Q 018375 243 EADTVTDPEVSKALYERASSRDKTIKLYPGMWHALTS-GEPDENIDIVFG----DIIAWLDER 300 (357)
Q Consensus 243 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~p~~~~~~~~~----~i~~fl~~~ 300 (357)
+.|.++|++......+.+.+ +++++... +||.... ..|.....+.+. .+..|+.+.
T Consensus 339 ~~DhI~P~~Sv~~g~~l~~g-~~~f~l~~-sGHIa~vVN~p~~~k~~~w~n~~~~~~~Wl~~a 399 (445)
T COG3243 339 EEDHIAPWSSVYLGARLLGG-EVTFVLSR-SGHIAGVVNPPGNAKYQYWTNLPADAEAWLSGA 399 (445)
T ss_pred cccccCCHHHHHHHHHhcCC-ceEEEEec-CceEEEEeCCcchhhhhcCCCCcchHHHHHHhh
Confidence 99999999999988888874 56666655 6997653 444443444444 778888654
No 122
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.48 E-value=5.2e-13 Score=120.86 Aligned_cols=116 Identities=21% Similarity=0.143 Sum_probs=87.2
Q ss_pred eEEecCCcEEEEEEEcCC-------CCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCC------
Q 018375 21 YIRNARGVQLFTCRWLPF-------STPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGA------ 87 (357)
Q Consensus 21 ~~~~~~g~~l~~~~~~p~-------~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~------ 87 (357)
.+...++.+|.|.....+ ....|+|||+||++++...| ..++..|+++||+|+++|+||||.|...
T Consensus 421 ~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~-~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~ 499 (792)
T TIGR03502 421 LLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENA-LAFAGTLAAAGVATIAIDHPLHGARSFDANASGV 499 (792)
T ss_pred EEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHH-HHHHHHHHhCCcEEEEeCCCCCCccccccccccc
Confidence 455566766666543211 12357899999999998777 7899999989999999999999999432
Q ss_pred ----Cc---c---------ccchhhHHHHHHHHHHHHH------hh----hccCCccEEEEEeChhHHHHHHHHhc
Q 018375 88 ----RC---Y---------IKKFENIVNDCDDFFKSVC------AQ----EEYTDKARFLYGESMGGAVTLLLHKK 137 (357)
Q Consensus 88 ----~~---~---------~~~~~~~~~d~~~~l~~l~------~~----~~~~~~~v~lvG~S~Gg~~a~~~a~~ 137 (357)
.. + ..++++.+.|+..+...+. .. ..++..+++++||||||.++..++..
T Consensus 500 ~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 500 NATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred cccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 11 1 1267888999999988885 11 12456799999999999999999864
No 123
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.47 E-value=3.8e-13 Score=105.46 Aligned_cols=180 Identities=16% Similarity=0.203 Sum_probs=90.8
Q ss_pred HHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHHHHHhhcccC
Q 018375 99 NDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTRVEEIIPKW 178 (357)
Q Consensus 99 ~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (357)
+-+..++++|..+..++.++|.|+|.|.||-+|+.+|..+| .|+++|.++|............... ..++..
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~~~~~~~~~~-------~~lp~~ 75 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQGIGFYRDSS-------KPLPYL 75 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--SSEEEETTE---------EE---
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEecchhcccCCC-------ccCCcC
Confidence 34667888888887777889999999999999999999999 6999999998765433211100000 000000
Q ss_pred cccCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCCccCChHH-HHHHH
Q 018375 179 KIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDPEV-SKALY 257 (357)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~-~~~~~ 257 (357)
....... . . ............... .........-.+.++++|+|+|.|++|.+.|... ++.+.
T Consensus 76 ~~~~~~~--~--~----------~~~~~~~~~~~~~~~--~~~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~ 139 (213)
T PF08840_consen 76 PFDISKF--S--W----------NEPGLLRSRYAFELA--DDKAVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIE 139 (213)
T ss_dssp -B-GGG---E--E-----------TTS-EE-TT-B--T--TTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHH
T ss_pred CcChhhc--e--e----------cCCcceehhhhhhcc--cccccccccccHHHcCCCEEEEEeCCCCccchHHHHHHHH
Confidence 0000000 0 0 000000000000000 0000011122467789999999999999998654 44445
Q ss_pred HHccC---C-CceEEEcCCCCcccccCC-CC-----------------------hhhhhHHHHHHHHHHHhcc
Q 018375 258 ERASS---R-DKTIKLYPGMWHALTSGE-PD-----------------------ENIDIVFGDIIAWLDERMS 302 (357)
Q Consensus 258 ~~~~~---~-~~~~~~~~~~gH~~~~~~-p~-----------------------~~~~~~~~~i~~fl~~~~~ 302 (357)
+++.. + +.+++.|+++||.+..-. |. ...++.+..+++||++++.
T Consensus 140 ~rL~~~~~~~~~~~l~Y~~aGH~i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~ 212 (213)
T PF08840_consen 140 ERLKAAGFPHNVEHLSYPGAGHLIEPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLG 212 (213)
T ss_dssp HHHHCTT-----EEEEETTB-S---STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH--
T ss_pred HHHHHhCCCCcceEEEcCCCCceecCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhC
Confidence 55543 2 578899999999974210 10 1246789999999999875
No 124
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.45 E-value=3.7e-12 Score=99.36 Aligned_cols=124 Identities=20% Similarity=0.163 Sum_probs=81.5
Q ss_pred ecCCcEEEEEEEcC----CCCCc-eEEEEEccCCccccccHHHHH-------HHHhhCCcEEEEeCCCC-CccCCCCCcc
Q 018375 24 NARGVQLFTCRWLP----FSTPK-AVVFLCHGYGMECSGFMRECG-------TRLASAGYAVFGIDYEG-HGRSRGARCY 90 (357)
Q Consensus 24 ~~~g~~l~~~~~~p----~~~~~-p~vv~lHG~~~~~~~~~~~~~-------~~l~~~G~~vi~~d~~G-~G~s~~~~~~ 90 (357)
...|.+|.|+.|.| .+++. |.|||+||.+.....-...+. ...-+.++-|+++.+-- +-.++.
T Consensus 168 ~~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~---- 243 (387)
T COG4099 168 ESTGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEE---- 243 (387)
T ss_pred cccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccccccccccc----
Confidence 35688999999999 33445 999999998866543322211 11112234444444211 111111
Q ss_pred ccchhhHHHHHHHHHH-HHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccc
Q 018375 91 IKKFENIVNDCDDFFK-SVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCK 153 (357)
Q Consensus 91 ~~~~~~~~~d~~~~l~-~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 153 (357)
..+........+++ .+.+..+++..++.++|.|+||+-++.++.++|+.+.+.+++++..+
T Consensus 244 --~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d 305 (387)
T COG4099 244 --KTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGD 305 (387)
T ss_pred --ccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCc
Confidence 12233334444444 66667778899999999999999999999999999999999988643
No 125
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.45 E-value=1.2e-12 Score=96.43 Aligned_cols=209 Identities=11% Similarity=0.055 Sum_probs=133.4
Q ss_pred EEEEEEEcCCCCCceEEEEEccCCc---cccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHH
Q 018375 29 QLFTCRWLPFSTPKAVVFLCHGYGM---ECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFF 105 (357)
Q Consensus 29 ~l~~~~~~p~~~~~p~vv~lHG~~~---~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l 105 (357)
.-...+|+| ....+.+||+||... +.... -.++..+.++||+|..++| +.+... .++++.+.++...+
T Consensus 55 ~q~VDIwg~-~~~~klfIfIHGGYW~~g~rk~c-lsiv~~a~~~gY~vasvgY---~l~~q~----htL~qt~~~~~~gv 125 (270)
T KOG4627|consen 55 RQLVDIWGS-TNQAKLFIFIHGGYWQEGDRKMC-LSIVGPAVRRGYRVASVGY---NLCPQV----HTLEQTMTQFTHGV 125 (270)
T ss_pred ceEEEEecC-CCCccEEEEEecchhhcCchhcc-cchhhhhhhcCeEEEEecc---CcCccc----ccHHHHHHHHHHHH
Confidence 455678877 345788999999643 22233 2455566678999999875 333322 27788888888888
Q ss_pred HHHHhhhccCCccEEEEEeChhHHHHHHHHhcC-CCcccEEEEeccccccccccCChhHHHHHHHHHHhhcccCcccCcc
Q 018375 106 KSVCAQEEYTDKARFLYGESMGGAVTLLLHKKD-PSFWNGAVLVAPMCKISEKVKPHPVLVNILTRVEEIIPKWKIVPTK 184 (357)
Q Consensus 106 ~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~-p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (357)
+++.+... ..+.+.+-|||.|+.+|+.+..+. ..+|.++++.++..+..+.... -..
T Consensus 126 ~filk~~~-n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~t--------------e~g------- 183 (270)
T KOG4627|consen 126 NFILKYTE-NTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSNT--------------ESG------- 183 (270)
T ss_pred HHHHHhcc-cceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhCC--------------ccc-------
Confidence 88866544 456688899999999999887653 3479999998887653321100 000
Q ss_pred ccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCCccCChHHHHHHHHHccCCC
Q 018375 185 DVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYERASSRD 264 (357)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~ 264 (357)
..+-.... ......-....+..++.|+|++.|++|.---.++.+.+...+. .
T Consensus 184 ---~dlgLt~~-----------------------~ae~~Scdl~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~--~ 235 (270)
T KOG4627|consen 184 ---NDLGLTER-----------------------NAESVSCDLWEYTDVTVWILVVAAEHESPKLIEQNRDFADQLR--K 235 (270)
T ss_pred ---cccCcccc-----------------------hhhhcCccHHHhcCceeeeeEeeecccCcHHHHhhhhHHHHhh--h
Confidence 00000000 0000011122456788999999999997666788888888885 6
Q ss_pred ceEEEcCCCCcccccCCCChhhhhHHHHHHHH
Q 018375 265 KTIKLYPGMWHALTSGEPDENIDIVFGDIIAW 296 (357)
Q Consensus 265 ~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~f 296 (357)
+.+..+++.+|+-.+++....-..+...+.+|
T Consensus 236 a~~~~f~n~~hy~I~~~~~~~~s~~~~~~~~~ 267 (270)
T KOG4627|consen 236 ASFTLFKNYDHYDIIEETAIDDSDVSRFLRNI 267 (270)
T ss_pred cceeecCCcchhhHHHHhccccchHHHHHHHH
Confidence 89999999999987655433222244444443
No 126
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.42 E-value=1.6e-11 Score=94.46 Aligned_cols=118 Identities=15% Similarity=0.134 Sum_probs=88.7
Q ss_pred EEEEEEEcC-CCCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHH
Q 018375 29 QLFTCRWLP-FSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKS 107 (357)
Q Consensus 29 ~l~~~~~~p-~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~ 107 (357)
.....++.| ..+..|+|+|+||+.-. ..|+..+..+++.+||.|+++++-..- . + +-.+.+++..++++|
T Consensus 32 PkpLlI~tP~~~G~yPVilF~HG~~l~-ns~Ys~lL~HIASHGfIVVAPQl~~~~--~-p-----~~~~Ei~~aa~V~~W 102 (307)
T PF07224_consen 32 PKPLLIVTPSEAGTYPVILFLHGFNLY-NSFYSQLLAHIASHGFIVVAPQLYTLF--P-P-----DGQDEIKSAASVINW 102 (307)
T ss_pred CCCeEEecCCcCCCccEEEEeechhhh-hHHHHHHHHHHhhcCeEEEechhhccc--C-C-----CchHHHHHHHHHHHH
Confidence 445566777 56678999999999876 445599999999999999999986431 1 1 334456777777777
Q ss_pred HHhhh--------ccCCccEEEEEeChhHHHHHHHHhcCC--CcccEEEEeccccccc
Q 018375 108 VCAQE--------EYTDKARFLYGESMGGAVTLLLHKKDP--SFWNGAVLVAPMCKIS 155 (357)
Q Consensus 108 l~~~~--------~~~~~~v~lvG~S~Gg~~a~~~a~~~p--~~v~~~vl~~~~~~~~ 155 (357)
+.... ..+..++.++|||.||-.|..+|..+. -.+.++|.++|+....
T Consensus 103 L~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~~ 160 (307)
T PF07224_consen 103 LPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGTS 160 (307)
T ss_pred HHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCCC
Confidence 75421 125679999999999999999998763 2489999999986543
No 127
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.42 E-value=2.4e-11 Score=87.88 Aligned_cols=175 Identities=13% Similarity=0.116 Sum_probs=115.3
Q ss_pred eEEEEEccCCcccc-ccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEEE
Q 018375 43 AVVFLCHGYGMECS-GFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFL 121 (357)
Q Consensus 43 p~vv~lHG~~~~~~-~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l 121 (357)
+.+|++||+.++.. .|...+...|. .+-.+++... .....+++++.+.+.+... .++++|
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~----~a~rveq~~w--------~~P~~~dWi~~l~~~v~a~-------~~~~vl 63 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALP----NARRVEQDDW--------EAPVLDDWIARLEKEVNAA-------EGPVVL 63 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCc----cchhcccCCC--------CCCCHHHHHHHHHHHHhcc-------CCCeEE
Confidence 45899999987754 34332222221 2333333211 1126788888888777776 567999
Q ss_pred EEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHHHHHhhcccCcccCccccchhhccChhHHHHHh
Q 018375 122 YGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTRVEEIIPKWKIVPTKDVIDSAFKDSIKREEIR 201 (357)
Q Consensus 122 vG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (357)
|+||+|+.+++.++.+....|.|++|++|+....+...+. ..
T Consensus 64 VAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~~~~~~~~------------~~-------------------------- 105 (181)
T COG3545 64 VAHSLGCATVAHWAEHIQRQVAGALLVAPPDVSRPEIRPK------------HL-------------------------- 105 (181)
T ss_pred EEecccHHHHHHHHHhhhhccceEEEecCCCccccccchh------------hc--------------------------
Confidence 9999999999999987766899999999875322110000 00
Q ss_pred hcccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCCccCChHHHHHHHHHccCCCceEEEcCCCCcccccCC
Q 018375 202 NNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYERASSRDKTIKLYPGMWHALTSGE 281 (357)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 281 (357)
.. .+. .....+.-|.+++...+|++++++.++.+.+.+ +..++...++||..-.+.
T Consensus 106 ---~t-----------------f~~-~p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~w---gs~lv~~g~~GHiN~~sG 161 (181)
T COG3545 106 ---MT-----------------FDP-IPREPLPFPSVVVASRNDPYVSYEHAEDLANAW---GSALVDVGEGGHINAESG 161 (181)
T ss_pred ---cc-----------------cCC-CccccCCCceeEEEecCCCCCCHHHHHHHHHhc---cHhheecccccccchhhc
Confidence 00 000 112334568999999999999999999999999 688999999999875333
Q ss_pred CChhhhhHHHHHHHHHHH
Q 018375 282 PDENIDIVFGDIIAWLDE 299 (357)
Q Consensus 282 p~~~~~~~~~~i~~fl~~ 299 (357)
-. .+.+....+.+|+.+
T Consensus 162 ~g-~wpeg~~~l~~~~s~ 178 (181)
T COG3545 162 FG-PWPEGYALLAQLLSR 178 (181)
T ss_pred CC-CcHHHHHHHHHHhhh
Confidence 33 244466666666644
No 128
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.41 E-value=2.9e-11 Score=96.24 Aligned_cols=207 Identities=18% Similarity=0.189 Sum_probs=122.8
Q ss_pred CceEEEEEccCCccccccHHHHHHHHh-hCCc----EEEEeCCCCC----ccCC----CC------Cccc-cchhhHHHH
Q 018375 41 PKAVVFLCHGYGMECSGFMRECGTRLA-SAGY----AVFGIDYEGH----GRSR----GA------RCYI-KKFENIVND 100 (357)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~l~-~~G~----~vi~~d~~G~----G~s~----~~------~~~~-~~~~~~~~d 100 (357)
...+.||+||++++...+ ..++..+. +.|. -++.++--|. |.=. .+ .... .++...++.
T Consensus 10 ~~tPTifihG~~gt~~s~-~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~w 88 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANSF-NHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKW 88 (255)
T ss_dssp S-EEEEEE--TTGGCCCC-HHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHH
T ss_pred CCCcEEEECCCCCChhHH-HHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHH
Confidence 345689999999998887 89999997 6653 2344444443 2111 11 0111 257788999
Q ss_pred HHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCC-----cccEEEEeccccccccccCChhHHHHHHHHHHhhc
Q 018375 101 CDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPS-----FWNGAVLVAPMCKISEKVKPHPVLVNILTRVEEII 175 (357)
Q Consensus 101 ~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~-----~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (357)
+..++.+|. ..++..++-+|||||||..++.++..+.. .+..+|.|++++..........
T Consensus 89 l~~vl~~L~--~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~------------- 153 (255)
T PF06028_consen 89 LKKVLKYLK--KKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQ------------- 153 (255)
T ss_dssp HHHHHHHHH--HCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-T-------------
T ss_pred HHHHHHHHH--HhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccc-------------
Confidence 999999994 45568999999999999999999876432 4899999998765432211000
Q ss_pred ccCcccCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhH-hhccCCccccEEEEeeC------CCccC
Q 018375 176 PKWKIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSL-EDSLSKVMIPFFVLHGE------ADTVT 248 (357)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~Pvl~i~g~------~D~~~ 248 (357)
....+. ...+......+..+ ... ...++ -++.+|.|.|+ .|..|
T Consensus 154 ------~~~~~~-------------------~~gp~~~~~~y~~l---~~~~~~~~p-~~i~VLnI~G~~~~g~~sDG~V 204 (255)
T PF06028_consen 154 ------NQNDLN-------------------KNGPKSMTPMYQDL---LKNRRKNFP-KNIQVLNIYGDLEDGSNSDGIV 204 (255)
T ss_dssp ------TTT-CS-------------------TT-BSS--HHHHHH---HHTHGGGST-TT-EEEEEEEESBTTCSBTSSS
T ss_pred ------hhhhhc-------------------ccCCcccCHHHHHH---HHHHHhhCC-CCeEEEEEecccCCCCCCCeEE
Confidence 000000 00000001111111 111 11222 25679999998 89999
Q ss_pred ChHHHHHHHHHccC--CCceEEEcCC--CCcccccCCCChhhhhHHHHHHHHH
Q 018375 249 DPEVSKALYERASS--RDKTIKLYPG--MWHALTSGEPDENIDIVFGDIIAWL 297 (357)
Q Consensus 249 ~~~~~~~~~~~~~~--~~~~~~~~~~--~gH~~~~~~p~~~~~~~~~~i~~fl 297 (357)
|...+..+...+.. ...+-.++.| +.|.-..+.+. |.+.|.+||
T Consensus 205 ~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~~-----V~~~I~~FL 252 (255)
T PF06028_consen 205 PNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENPQ-----VDKLIIQFL 252 (255)
T ss_dssp BHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCHH-----HHHHHHHHH
T ss_pred eHHHHHHHHHHhhcccCceEEEEEECCCCccccCCCCHH-----HHHHHHHHh
Confidence 99998888877764 3455666654 68988766554 889999998
No 129
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.40 E-value=7.1e-12 Score=92.90 Aligned_cols=102 Identities=22% Similarity=0.232 Sum_probs=81.7
Q ss_pred eEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEEEE
Q 018375 43 AVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLY 122 (357)
Q Consensus 43 p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lv 122 (357)
..+||+-|=++-. .+-..+++.|+++|+.|+.+|-+-|-.+.+ +.++.+.|+..+++.... .++.++++|+
T Consensus 3 t~~v~~SGDgGw~-~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~r------tP~~~a~Dl~~~i~~y~~--~w~~~~vvLi 73 (192)
T PF06057_consen 3 TLAVFFSGDGGWR-DLDKQIAEALAKQGVPVVGVDSLRYFWSER------TPEQTAADLARIIRHYRA--RWGRKRVVLI 73 (192)
T ss_pred EEEEEEeCCCCch-hhhHHHHHHHHHCCCeEEEechHHHHhhhC------CHHHHHHHHHHHHHHHHH--HhCCceEEEE
Confidence 3578888866543 444789999999999999999876665532 678889999999999854 4468999999
Q ss_pred EeChhHHHHHHHHhcCC----CcccEEEEeccccc
Q 018375 123 GESMGGAVTLLLHKKDP----SFWNGAVLVAPMCK 153 (357)
Q Consensus 123 G~S~Gg~~a~~~a~~~p----~~v~~~vl~~~~~~ 153 (357)
|+|+|+-+.-....+.| ++|..++|++|...
T Consensus 74 GYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~ 108 (192)
T PF06057_consen 74 GYSFGADVLPFIYNRLPAALRARVAQVVLLSPSTT 108 (192)
T ss_pred eecCCchhHHHHHhhCCHHHHhheeEEEEeccCCc
Confidence 99999988877776666 46999999998654
No 130
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.36 E-value=3.9e-11 Score=91.32 Aligned_cols=264 Identities=14% Similarity=0.119 Sum_probs=145.6
Q ss_pred ecCCcEEEEEEEcC----CCCCceEEEEEccCCccccccHHHHHHHHhhC---CcEEEEeCCCCCccCC---C-----CC
Q 018375 24 NARGVQLFTCRWLP----FSTPKAVVFLCHGYGMECSGFMRECGTRLASA---GYAVFGIDYEGHGRSR---G-----AR 88 (357)
Q Consensus 24 ~~~g~~l~~~~~~p----~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~---G~~vi~~d~~G~G~s~---~-----~~ 88 (357)
+..|..++...++| ....++.|++++|.++....| ..++..|... .+.++.+..-||-.-+ . ..
T Consensus 7 ~~~gl~~si~~~~~~v~~~~~~~~li~~IpGNPG~~gFY-~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~ 85 (301)
T KOG3975|consen 7 TKSGLPTSILTLKPWVTKSGEDKPLIVWIPGNPGLLGFY-TEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTN 85 (301)
T ss_pred eecCCcccceeeeeeeccCCCCceEEEEecCCCCchhHH-HHHHHHHHHhcccccceeEEeccccccCCccccccccccc
Confidence 44565555555555 346789999999999986655 8888877654 1558888877775433 1 11
Q ss_pred ccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCC--CcccEEEEeccccccccccCChhHHHH
Q 018375 89 CYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDP--SFWNGAVLVAPMCKISEKVKPHPVLVN 166 (357)
Q Consensus 89 ~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p--~~v~~~vl~~~~~~~~~~~~~~~~~~~ 166 (357)
...++++++++.-.++++.... ...+++++|||.|+++.+.+..... -.|.+++++-|...-............
T Consensus 86 ~eifsL~~QV~HKlaFik~~~P----k~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~ 161 (301)
T KOG3975|consen 86 EEIFSLQDQVDHKLAFIKEYVP----KDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTK 161 (301)
T ss_pred ccccchhhHHHHHHHHHHHhCC----CCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeee
Confidence 2345788888888888877643 4689999999999999999986322 247888887765421111110000000
Q ss_pred HHHH---HHhhcccCcccCccccc-----hhhccChhHHHHHhhcccccCCccchH-----HHHHHHHhhhhHhhccCCc
Q 018375 167 ILTR---VEEIIPKWKIVPTKDVI-----DSAFKDSIKREEIRNNKLIYQDKPRLK-----TALEMLRTSMSLEDSLSKV 233 (357)
Q Consensus 167 ~~~~---~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i 233 (357)
.+.. ...............+. ...+......+........+.....+. ...++........+.+++-
T Consensus 162 ~l~~~~hv~~lt~yi~~~~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~~d~e~~een 241 (301)
T KOG3975|consen 162 VLRYLPHVVSLTSYIYWILLPGFIRFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTTRDIEYCEEN 241 (301)
T ss_pred eeeeehhhhheeeeeeeecChHHHHHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHHhHHHHHHhc
Confidence 0000 00000000000000000 000000000000000000000000000 0001111111112233444
Q ss_pred cccEEEEeeCCCccCChHHHHHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHH
Q 018375 234 MIPFFVLHGEADTVTDPEVSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWL 297 (357)
Q Consensus 234 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl 297 (357)
.+-+.+.+|..|.|||.+....+.+.++..++++.+ ++..|.+...+.+. ++..+.+.+
T Consensus 242 ~d~l~Fyygt~DgW~p~~~~d~~kdd~~eed~~Lde-dki~HAFV~~~~q~----ma~~v~d~~ 300 (301)
T KOG3975|consen 242 LDSLWFYYGTNDGWVPSHYYDYYKDDVPEEDLKLDE-DKIPHAFVVKHAQY----MANAVFDMI 300 (301)
T ss_pred CcEEEEEccCCCCCcchHHHHHHhhhcchhceeecc-ccCCcceeecccHH----HHHHHHHhh
Confidence 567889999999999999999999999876777777 88999998877776 666666544
No 131
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.36 E-value=2.7e-11 Score=90.39 Aligned_cols=182 Identities=19% Similarity=0.272 Sum_probs=121.0
Q ss_pred ceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCC-----------------CCccccchhhHHHHHHHH
Q 018375 42 KAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRG-----------------ARCYIKKFENIVNDCDDF 104 (357)
Q Consensus 42 ~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~-----------------~~~~~~~~~~~~~d~~~~ 104 (357)
..+||++||.+.+...| ..+++.|.-....-+++.-|-.-.+.. .......+...++.+..+
T Consensus 3 ~atIi~LHglGDsg~~~-~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~L 81 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSGW-AQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANL 81 (206)
T ss_pred eEEEEEEecCCCCCccH-HHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHH
Confidence 45799999999998888 666666766667778776553211110 000112334444555555
Q ss_pred HHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHHHHHhhcccCcccCcc
Q 018375 105 FKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTRVEEIIPKWKIVPTK 184 (357)
Q Consensus 105 l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (357)
+++.. ..+++..++.+-|.|+||.+++..+..+|..+.+++..++....... .++.+.
T Consensus 82 i~~e~-~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~----------------~~~~~~----- 139 (206)
T KOG2112|consen 82 IDNEP-ANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASI----------------GLPGWL----- 139 (206)
T ss_pred HHHHH-HcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchh----------------hccCCc-----
Confidence 55543 33456788999999999999999999998888888777665431110 000000
Q ss_pred ccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCCccCChHHHHHHHHHccC--
Q 018375 185 DVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYERASS-- 262 (357)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~-- 262 (357)
...+ .+|++..||+.|++||....+...+.+..
T Consensus 140 -------------------------------------------~~~~--~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~ 174 (206)
T KOG2112|consen 140 -------------------------------------------PGVN--YTPILLCHGTADPLVPFRFGEKSAQFLKSLG 174 (206)
T ss_pred -------------------------------------------cccC--cchhheecccCCceeehHHHHHHHHHHHHcC
Confidence 0001 67999999999999998766665555443
Q ss_pred CCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHH
Q 018375 263 RDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDE 299 (357)
Q Consensus 263 ~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~ 299 (357)
..+++..|+|.+|... |++ .+.+..|+.+
T Consensus 175 ~~~~f~~y~g~~h~~~---~~e-----~~~~~~~~~~ 203 (206)
T KOG2112|consen 175 VRVTFKPYPGLGHSTS---PQE-----LDDLKSWIKT 203 (206)
T ss_pred CceeeeecCCcccccc---HHH-----HHHHHHHHHH
Confidence 3489999999999876 454 6778888876
No 132
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.35 E-value=2.6e-12 Score=104.69 Aligned_cols=224 Identities=19% Similarity=0.155 Sum_probs=133.5
Q ss_pred CcEEEEEEEcCCC-------CCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCC--ccCCCCCcc-----cc
Q 018375 27 GVQLFTCRWLPFS-------TPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGH--GRSRGARCY-----IK 92 (357)
Q Consensus 27 g~~l~~~~~~p~~-------~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~--G~s~~~~~~-----~~ 92 (357)
+.++...+|.|.. ...|+||+-||.++....+ ..+++.|++.||.|..+|.+|- |........ ..
T Consensus 49 ~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~Gs~~~~f-~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~ 127 (365)
T COG4188 49 DRERPVDLRLPQGGTGTVALYLLPLVVLSHGSGSYVTGF-AWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPA 127 (365)
T ss_pred CCccccceeccCCCccccccCcCCeEEecCCCCCCccch-hhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchh
Confidence 5677777777722 3579999999999987777 8999999999999999999984 333211110 01
Q ss_pred chhhHHHHHHHHHHHHHhh---h----ccCCccEEEEEeChhHHHHHHHHhcCCCcccE--------EEEeccccccccc
Q 018375 93 KFENIVNDCDDFFKSVCAQ---E----EYTDKARFLYGESMGGAVTLLLHKKDPSFWNG--------AVLVAPMCKISEK 157 (357)
Q Consensus 93 ~~~~~~~d~~~~l~~l~~~---~----~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~--------~vl~~~~~~~~~~ 157 (357)
-+.+...|+..+|++|... . ..+..+|.++|||+||+.++.++....+.... .+...+.....
T Consensus 128 ~~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~~~~~~~~~-- 205 (365)
T COG4188 128 EWWERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRICLDPPGLNG-- 205 (365)
T ss_pred hhhcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcccCCCCcCh--
Confidence 2345667888888888765 2 23567999999999999999998654431100 01011100000
Q ss_pred cCChhHHHHHHHHHHhhcccCcccCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccE
Q 018375 158 VKPHPVLVNILTRVEEIIPKWKIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPF 237 (357)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pv 237 (357)
..+. .....+. ......+.++..+..+...+.. . ..--...+.+++.|+
T Consensus 206 -------~~l~----q~~av~~-----~~~~~~~rDpriravvA~~p~~-------~--------~~Fg~tgl~~v~~P~ 254 (365)
T COG4188 206 -------RLLN----QCAAVWL-----PRQAYDLRDPRIRAVVAINPAL-------G--------MIFGTTGLVKVTDPV 254 (365)
T ss_pred -------hhhc----ccccccc-----chhhhccccccceeeeeccCCc-------c--------cccccccceeeecce
Confidence 0000 0000000 0000001111100000000000 0 000134578899999
Q ss_pred EEEeeCCCccCChH-HHHHHHHHccCCCceEEEcCCCCcccccCCCCh
Q 018375 238 FVLHGEADTVTDPE-VSKALYERASSRDKTIKLYPGMWHALTSGEPDE 284 (357)
Q Consensus 238 l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~ 284 (357)
+++.|..|.+.|.. .....+..++++...+..++++.|+.+++-..+
T Consensus 255 ~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~ 302 (365)
T COG4188 255 LLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCKE 302 (365)
T ss_pred eeecccccccCCcccccccccccCCcchhheeecCCCccccccccCcc
Confidence 99999999977654 445556667655568889999999999877766
No 133
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.34 E-value=4e-10 Score=98.65 Aligned_cols=137 Identities=16% Similarity=0.138 Sum_probs=92.3
Q ss_pred ceeeeeEEecC---CcEEEEEEEcC--CCCCceEEEEEccCCccccccHHHHH------------------HHHhhCCcE
Q 018375 16 EYQEEYIRNAR---GVQLFTCRWLP--FSTPKAVVFLCHGYGMECSGFMRECG------------------TRLASAGYA 72 (357)
Q Consensus 16 ~~~~~~~~~~~---g~~l~~~~~~p--~~~~~p~vv~lHG~~~~~~~~~~~~~------------------~~l~~~G~~ 72 (357)
.....++...+ +..++|+.+.. .....|+||+++|.++.+..+ ..+. ..+.+. ..
T Consensus 46 ~~~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~-G~f~E~GP~~i~~~~~~~~~n~~sW~~~-~~ 123 (462)
T PTZ00472 46 NQWSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMF-ALLAENGPCLMNETTGDIYNNTYSWNNE-AY 123 (462)
T ss_pred cceeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHH-hhhccCCCeEEeCCCCceeECCcccccc-cC
Confidence 33445555432 57899998876 334579999999998875432 1111 012222 68
Q ss_pred EEEeCCC-CCccCCCCCc-cccchhhHHHHHHHHHHHHHhhh-ccCCccEEEEEeChhHHHHHHHHhcC----------C
Q 018375 73 VFGIDYE-GHGRSRGARC-YIKKFENIVNDCDDFFKSVCAQE-EYTDKARFLYGESMGGAVTLLLHKKD----------P 139 (357)
Q Consensus 73 vi~~d~~-G~G~s~~~~~-~~~~~~~~~~d~~~~l~~l~~~~-~~~~~~v~lvG~S~Gg~~a~~~a~~~----------p 139 (357)
++.+|.| |+|.|..... ...+.++.++|+.++++....+. .....+++|+|+|+||..+..+|... +
T Consensus 124 ~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~ 203 (462)
T PTZ00472 124 VIYVDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLY 203 (462)
T ss_pred eEEEeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCce
Confidence 8999976 8888865432 22355788999999998775432 23568999999999999887777531 1
Q ss_pred CcccEEEEecccccc
Q 018375 140 SFWNGAVLVAPMCKI 154 (357)
Q Consensus 140 ~~v~~~vl~~~~~~~ 154 (357)
-.++++++.++..+.
T Consensus 204 inLkGi~IGNg~~dp 218 (462)
T PTZ00472 204 INLAGLAVGNGLTDP 218 (462)
T ss_pred eeeEEEEEeccccCh
Confidence 137899998887654
No 134
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.33 E-value=3.1e-10 Score=89.29 Aligned_cols=128 Identities=18% Similarity=0.166 Sum_probs=92.3
Q ss_pred EecCCcEEEEEEEcC--CCCCceEEEEEccCCccccccHHHHH--HHHh-hCCcEEEEeCCC-C------CccCCCCCcc
Q 018375 23 RNARGVQLFTCRWLP--FSTPKAVVFLCHGYGMECSGFMRECG--TRLA-SAGYAVFGIDYE-G------HGRSRGARCY 90 (357)
Q Consensus 23 ~~~~g~~l~~~~~~p--~~~~~p~vv~lHG~~~~~~~~~~~~~--~~l~-~~G~~vi~~d~~-G------~G~s~~~~~~ 90 (357)
...+|.+..|++|.| ..++.|.||++||..++...+ .... +.|+ +.||-|+.+|-- + .+.+..+...
T Consensus 40 ~~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~-~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~ 118 (312)
T COG3509 40 FDVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQ-LHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADR 118 (312)
T ss_pred cccCCCccceEEEcCCCCCCCCCEEEEEecCCCChHHh-hcccchhhhhcccCcEEECcCccccccCCCcccccCCcccc
Confidence 355888999999999 334458999999998875543 2221 3333 459999999532 1 1222111110
Q ss_pred ccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEecccc
Q 018375 91 IKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMC 152 (357)
Q Consensus 91 ~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 152 (357)
..-.+.+..+.+++..+..+..++..+|++.|.|-||.++..++..+|+.+.++..+++..
T Consensus 119 -~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 119 -RRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred -cCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 1223456788888999988888888899999999999999999999999999998888765
No 135
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.32 E-value=4.1e-11 Score=94.27 Aligned_cols=166 Identities=21% Similarity=0.188 Sum_probs=81.2
Q ss_pred CceEEEEEccCCccccccH---HHHHHHHhhCCcEEEEeCCCCCc-----cCCC---------CCcccc----------c
Q 018375 41 PKAVVFLCHGYGMECSGFM---RECGTRLASAGYAVFGIDYEGHG-----RSRG---------ARCYIK----------K 93 (357)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~---~~~~~~l~~~G~~vi~~d~~G~G-----~s~~---------~~~~~~----------~ 93 (357)
.++-||+|||++.+...+- ..+...|.+.++.++.+|-|--- -... .....+ .
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 4677999999999977662 34555665535899888866211 1100 000000 1
Q ss_pred hhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcC--------CCcccEEEEeccccccccccCChhHHH
Q 018375 94 FENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKD--------PSFWNGAVLVAPMCKISEKVKPHPVLV 165 (357)
Q Consensus 94 ~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~--------p~~v~~~vl~~~~~~~~~~~~~~~~~~ 165 (357)
...+.+.+..+.+.+.+ ...-..|+|+|.||.+|..++... ...++.+|++++........
T Consensus 83 ~~~~~~sl~~l~~~i~~----~GPfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~~------- 151 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEE----NGPFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPDY------- 151 (212)
T ss_dssp G---HHHHHHHHHHHHH----H---SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-G-------
T ss_pred ccCHHHHHHHHHHHHHh----cCCeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchhh-------
Confidence 11122222222222221 123467999999999998887421 22478999998865422110
Q ss_pred HHHHHHHhhcccCcccCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCC
Q 018375 166 NILTRVEEIIPKWKIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEAD 245 (357)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D 245 (357)
.... .-.+|++|+|.|+|++|
T Consensus 152 ----------------------------------------------------------~~~~-~~~~i~iPtlHv~G~~D 172 (212)
T PF03959_consen 152 ----------------------------------------------------------QELY-DEPKISIPTLHVIGEND 172 (212)
T ss_dssp ----------------------------------------------------------TTTT---TT---EEEEEEETT-
T ss_pred ----------------------------------------------------------hhhh-ccccCCCCeEEEEeCCC
Confidence 0000 23567999999999999
Q ss_pred ccCChHHHHHHHHHccCCCceEEEcCCCCcccc
Q 018375 246 TVTDPEVSKALYERASSRDKTIKLYPGMWHALT 278 (357)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 278 (357)
.+++++.++.+.+.+.. ..+++..++ ||.+.
T Consensus 173 ~~~~~~~s~~L~~~~~~-~~~v~~h~g-GH~vP 203 (212)
T PF03959_consen 173 PVVPPERSEALAEMFDP-DARVIEHDG-GHHVP 203 (212)
T ss_dssp SSS-HHHHHHHHHHHHH-HEEEEEESS-SSS--
T ss_pred CCcchHHHHHHHHhccC-CcEEEEECC-CCcCc
Confidence 99999999999999863 266666664 78775
No 136
>PRK04940 hypothetical protein; Provisional
Probab=99.30 E-value=2.4e-10 Score=84.74 Aligned_cols=172 Identities=15% Similarity=0.125 Sum_probs=98.3
Q ss_pred EEEEccCCccccc--cHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEEEE
Q 018375 45 VFLCHGYGMECSG--FMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLY 122 (357)
Q Consensus 45 vv~lHG~~~~~~~--~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lv 122 (357)
||++||+.++... ........+ .-+++++ +++. ......++.+.+.+..+... . ..+++.||
T Consensus 2 IlYlHGF~SS~~S~~~Ka~~l~~~-~p~~~~~--~l~~-----------~~P~~a~~~l~~~i~~~~~~-~-~~~~~~li 65 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVLQLQFI-DPDVRLI--SYST-----------LHPKHDMQHLLKEVDKMLQL-S-DDERPLIC 65 (180)
T ss_pred EEEeCCCCCCCCccHHHHHhheee-CCCCeEE--ECCC-----------CCHHHHHHHHHHHHHHhhhc-c-CCCCcEEE
Confidence 7999999988666 312222222 1123332 2220 13344444455555443111 0 12579999
Q ss_pred EeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHHHHHhhcccCcccCccccchhhccChhHHHHHhh
Q 018375 123 GESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTRVEEIIPKWKIVPTKDVIDSAFKDSIKREEIRN 202 (357)
Q Consensus 123 G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (357)
|.|+||+.|..++.++. ...|+++|...+...+ ...+.. .. .
T Consensus 66 GSSLGGyyA~~La~~~g---~~aVLiNPAv~P~~~L-------------~~~ig~----~~-~----------------- 107 (180)
T PRK04940 66 GVGLGGYWAERIGFLCG---IRQVIFNPNLFPEENM-------------EGKIDR----PE-E----------------- 107 (180)
T ss_pred EeChHHHHHHHHHHHHC---CCEEEECCCCChHHHH-------------HHHhCC----Cc-c-----------------
Confidence 99999999999999886 3678899987643211 010000 00 0
Q ss_pred cccccCCccchHHHHHHHHhhhhHhhccCCccc--cEEEEeeCCCccCChHHHHHHHHHccCCCc-eEEEcCCCCccccc
Q 018375 203 NKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMI--PFFVLHGEADTVTDPEVSKALYERASSRDK-TIKLYPGMWHALTS 279 (357)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~ 279 (357)
+. .. .....+.+. ++. ..+++..+.|++.+...+...+. ++ +..+.+|++|.+.
T Consensus 108 ----y~------~~------~~~h~~eL~-~~~p~r~~vllq~gDEvLDyr~a~~~y~-----~~y~~~v~~GGdH~f~- 164 (180)
T PRK04940 108 ----YA------DI------ATKCVTNFR-EKNRDRCLVILSRNDEVLDSQRTAEELH-----PYYEIVWDEEQTHKFK- 164 (180)
T ss_pred ----hh------hh------hHHHHHHhh-hcCcccEEEEEeCCCcccCHHHHHHHhc-----cCceEEEECCCCCCCC-
Confidence 00 00 000011111 222 35899999999999987766553 34 7889999999875
Q ss_pred CCCChhhhhHHHHHHHHHH
Q 018375 280 GEPDENIDIVFGDIIAWLD 298 (357)
Q Consensus 280 ~~p~~~~~~~~~~i~~fl~ 298 (357)
..++....|.+|++
T Consensus 165 -----~fe~~l~~I~~F~~ 178 (180)
T PRK04940 165 -----NISPHLQRIKAFKT 178 (180)
T ss_pred -----CHHHHHHHHHHHHh
Confidence 23448899999984
No 137
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.28 E-value=1.9e-10 Score=94.62 Aligned_cols=228 Identities=21% Similarity=0.273 Sum_probs=121.6
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhh---cc-CCccEEEEEeChhHHHHHHHH
Q 018375 60 RECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQE---EY-TDKARFLYGESMGGAVTLLLH 135 (357)
Q Consensus 60 ~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~---~~-~~~~v~lvG~S~Gg~~a~~~a 135 (357)
..++..+.++||.|+++||.|.|.. +. .-......+.+.++..+... +. ...++.++|||-||.-++..+
T Consensus 16 ~~~l~~~L~~GyaVv~pDY~Glg~~-----y~-~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA 89 (290)
T PF03583_consen 16 APFLAAWLARGYAVVAPDYEGLGTP-----YL-NGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAA 89 (290)
T ss_pred HHHHHHHHHCCCEEEecCCCCCCCc-----cc-CcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHH
Confidence 4566777889999999999999871 11 22333444444444443322 22 246899999999999887766
Q ss_pred hc----CCCc---ccEEEEeccccccccccC---C---hhHHHHHHHHHHhhcccCcccCccccchhhccChh-------
Q 018375 136 KK----DPSF---WNGAVLVAPMCKISEKVK---P---HPVLVNILTRVEEIIPKWKIVPTKDVIDSAFKDSI------- 195 (357)
Q Consensus 136 ~~----~p~~---v~~~vl~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 195 (357)
.. -|+. +.+.+..+++.+...... . .......+..+....+... ..+...+....
T Consensus 90 ~l~~~YApeL~~~l~Gaa~gg~~~dl~~~~~~~~~~~~~g~~~~~l~gl~~~yP~l~-----~~~~~~l~~~g~~~~~~~ 164 (290)
T PF03583_consen 90 ELAPSYAPELNRDLVGAAAGGPPADLAALLRALNGGPFAGLVPYALLGLAAAYPELD-----ELLDSYLTPEGRALLDDA 164 (290)
T ss_pred HHhHHhCcccccceeEEeccCCccCHHHHHhccCCCccHhHHHHHHHHHHHhCccHH-----HHHHHHhhHHHHHHHHHH
Confidence 43 2443 677777777665432211 1 1111111122222222111 00011100000
Q ss_pred ----HHHHHhhcc-cc--------cCCccchH---HHHHHHHhhhhH-hhccCCccccEEEEeeCCCccCChHHHHHHHH
Q 018375 196 ----KREEIRNNK-LI--------YQDKPRLK---TALEMLRTSMSL-EDSLSKVMIPFFVLHGEADTVTDPEVSKALYE 258 (357)
Q Consensus 196 ----~~~~~~~~~-~~--------~~~~~~~~---~~~~~~~~~~~~-~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~ 258 (357)
......... .. +.....+. .....+.. ..+ ...-...+.|+++.+|..|.++|......+.+
T Consensus 165 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~l~~~~~~~P~~Pv~i~~g~~D~vvP~~~~~~l~~ 243 (290)
T PF03583_consen 165 RTRCLADIVAEYAFQDLFTGDTRYFKPGADLLADPAFRRALAE-NSLGMGGDWTPTVPVLIYQGTADEVVPPADTDALVA 243 (290)
T ss_pred HhhhHHHHHHHhhhccccccchhccCChhhhhhhHHHHHHHHH-hhccccCCCCCCCCEEEEecCCCCCCChHHHHHHHH
Confidence 000000000 00 00000000 00111111 011 00112347899999999999999999988888
Q ss_pred HccC---CCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHHhcccccc
Q 018375 259 RASS---RDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDERMSDANA 306 (357)
Q Consensus 259 ~~~~---~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~~~~~~ 306 (357)
.++. .++++..+++.+|....- . -.....+||.+.+....+
T Consensus 244 ~~c~~G~a~V~~~~~~~~~H~~~~~--~-----~~~~a~~Wl~~rf~G~~~ 287 (290)
T PF03583_consen 244 KWCAAGGADVEYVRYPGGGHLGAAF--A-----SAPDALAWLDDRFAGKPA 287 (290)
T ss_pred HHHHcCCCCEEEEecCCCChhhhhh--c-----CcHHHHHHHHHHHCCCCC
Confidence 7765 257888999999986521 1 345678999999887654
No 138
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.23 E-value=4.1e-10 Score=88.89 Aligned_cols=110 Identities=15% Similarity=0.157 Sum_probs=73.8
Q ss_pred CceEEEEEccCCccccccHHHHHHHHhh--------CCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhh
Q 018375 41 PKAVVFLCHGYGMECSGFMRECGTRLAS--------AGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQE 112 (357)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~l~~--------~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~ 112 (357)
.+.+|||+||.+++...+ +.++..+.+ ..+.++++|+......-.. ..+.+..+.+.+.++.+.+..
T Consensus 3 ~g~pVlFIhG~~Gs~~q~-rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g----~~l~~q~~~~~~~i~~i~~~~ 77 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQV-RSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHG----RTLQRQAEFLAEAIKYILELY 77 (225)
T ss_pred CCCEEEEECcCCCCHhHH-HHHHHHHhhhhhhccCccceeEEEeccCcccccccc----ccHHHHHHHHHHHHHHHHHhh
Confidence 356799999998886665 566655521 2488999998765322211 134455555555555554332
Q ss_pred ---ccCCccEEEEEeChhHHHHHHHHhcCC---CcccEEEEeccccccc
Q 018375 113 ---EYTDKARFLYGESMGGAVTLLLHKKDP---SFWNGAVLVAPMCKIS 155 (357)
Q Consensus 113 ---~~~~~~v~lvG~S~Gg~~a~~~a~~~p---~~v~~~vl~~~~~~~~ 155 (357)
..+.++++||||||||.+|-.++...+ +.|+.+|.++++....
T Consensus 78 ~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~ 126 (225)
T PF07819_consen 78 KSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGS 126 (225)
T ss_pred hhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCc
Confidence 336789999999999999988876433 4699999998775433
No 139
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.22 E-value=1.3e-09 Score=82.08 Aligned_cols=183 Identities=17% Similarity=0.126 Sum_probs=112.8
Q ss_pred CceEEEEEccCCccccccH---HHHHHHHhhCCcEEEEeCCCC------CccCCC------CC-------cc-------c
Q 018375 41 PKAVVFLCHGYGMECSGFM---RECGTRLASAGYAVFGIDYEG------HGRSRG------AR-------CY-------I 91 (357)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~---~~~~~~l~~~G~~vi~~d~~G------~G~s~~------~~-------~~-------~ 91 (357)
.++-|||+||+-.+...+- ..+...+.+. +..+.+|-|- .-.+.. +. .+ .
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~ 82 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASF 82 (230)
T ss_pred CCceEEEecchhhccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccccc
Confidence 3566999999988766552 2445566655 7778887772 111111 00 00 0
Q ss_pred cchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcC--C----C--cccEEEEeccccccccccCChhH
Q 018375 92 KKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKD--P----S--FWNGAVLVAPMCKISEKVKPHPV 163 (357)
Q Consensus 92 ~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~--p----~--~v~~~vl~~~~~~~~~~~~~~~~ 163 (357)
..+...-+.+..+.+++.++ ..=-.|+|+|.|+.++..++... . . .++-+|++++.......
T Consensus 83 ~~~~~~eesl~yl~~~i~en----GPFDGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~------ 152 (230)
T KOG2551|consen 83 TEYFGFEESLEYLEDYIKEN----GPFDGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKK------ 152 (230)
T ss_pred ccccChHHHHHHHHHHHHHh----CCCccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcch------
Confidence 00111122244444444332 23346999999999999988621 1 1 26778888776432100
Q ss_pred HHHHHHHHHhhcccCcccCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeC
Q 018375 164 LVNILTRVEEIIPKWKIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGE 243 (357)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~ 243 (357)
.+-......+++|.|.|.|+
T Consensus 153 ------------------------------------------------------------~~~~~~~~~i~~PSLHi~G~ 172 (230)
T KOG2551|consen 153 ------------------------------------------------------------LDESAYKRPLSTPSLHIFGE 172 (230)
T ss_pred ------------------------------------------------------------hhhhhhccCCCCCeeEEecc
Confidence 01112345689999999999
Q ss_pred CCccCChHHHHHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHHhccc
Q 018375 244 ADTVTDPEVSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDERMSD 303 (357)
Q Consensus 244 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~~~ 303 (357)
.|.+++...+..+++.+. +..++. -.+||.+.-.. . ..+.|.+||+..+..
T Consensus 173 ~D~iv~~~~s~~L~~~~~--~a~vl~-HpggH~VP~~~--~----~~~~i~~fi~~~~~~ 223 (230)
T KOG2551|consen 173 TDTIVPSERSEQLAESFK--DATVLE-HPGGHIVPNKA--K----YKEKIADFIQSFLQE 223 (230)
T ss_pred cceeecchHHHHHHHhcC--CCeEEe-cCCCccCCCch--H----HHHHHHHHHHHHHHh
Confidence 999999999999999996 444444 44699987433 3 778888888776543
No 140
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=99.20 E-value=4e-10 Score=96.81 Aligned_cols=249 Identities=12% Similarity=0.097 Sum_probs=157.2
Q ss_pred CCCccceeeeeEEecCCcEEEEEEEc-C-CCCCceEEEEEccCCcc--ccccHHHHHHHHhhCCcEEEEeCCCCCccCCC
Q 018375 11 NKTVVEYQEEYIRNARGVQLFTCRWL-P-FSTPKAVVFLCHGYGME--CSGFMRECGTRLASAGYAVFGIDYEGHGRSRG 86 (357)
Q Consensus 11 ~~~~~~~~~~~~~~~~g~~l~~~~~~-p-~~~~~p~vv~lHG~~~~--~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~ 86 (357)
+..++..++.+.++.||++|.|.+.. - ...+.|++|+--|...- ...| ......+.++|...+..+.||=|+=..
T Consensus 388 Da~~~~veQ~~atSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~f-s~~~~~WLerGg~~v~ANIRGGGEfGp 466 (648)
T COG1505 388 DADNYEVEQFFATSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRF-SGSRKLWLERGGVFVLANIRGGGEFGP 466 (648)
T ss_pred CccCceEEEEEEEcCCCccccEEEEecCCcCCCCceEEEeccccccccCCcc-chhhHHHHhcCCeEEEEecccCCccCH
Confidence 34477888999999999999999885 2 12267888777764332 1234 444488889999999999999766432
Q ss_pred C---CccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhH
Q 018375 87 A---RCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPV 163 (357)
Q Consensus 87 ~---~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~ 163 (357)
. .....+-+...+|..++++.|.++.-...+++.+.|-|-||.+......++|+.+.++|+-.|..++..-.
T Consensus 467 ~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDMlRYh----- 541 (648)
T COG1505 467 EWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDMLRYH----- 541 (648)
T ss_pred HHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhhhhhhc-----
Confidence 1 11112335567899999999987765567899999999999999888899999999999888876532100
Q ss_pred HHHHHHHHHhhcccCcccCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccC--CccccEEEEe
Q 018375 164 LVNILTRVEEIIPKWKIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLS--KVMIPFFVLH 241 (357)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~Pvl~i~ 241 (357)
.+...+ .+... +.++... .....+.....+ ..++ +.-.|+||-.
T Consensus 542 ---------~l~aG~------sW~~E-YG~Pd~P-----------------~d~~~l~~YSPy-~nl~~g~kYP~~LITT 587 (648)
T COG1505 542 ---------LLTAGS------SWIAE-YGNPDDP-----------------EDRAFLLAYSPY-HNLKPGQKYPPTLITT 587 (648)
T ss_pred ---------ccccch------hhHhh-cCCCCCH-----------------HHHHHHHhcCch-hcCCccccCCCeEEEc
Confidence 000000 00000 0011100 001111111111 1111 2346899999
Q ss_pred eCCCccCChHHHHHHHHHccCCCc--eEEEcCCCCcccccCCCChhhhhHHHHHHHHHHHhc
Q 018375 242 GEADTVTDPEVSKALYERASSRDK--TIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDERM 301 (357)
Q Consensus 242 g~~D~~~~~~~~~~~~~~~~~~~~--~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~ 301 (357)
+.+|.-|.|.++++++.++...+. -+.+=-++||..-- +......-...+..||.+.+
T Consensus 588 s~~DDRVHPaHarKfaa~L~e~~~pv~~~e~t~gGH~g~~--~~~~~A~~~a~~~afl~r~L 647 (648)
T COG1505 588 SLHDDRVHPAHARKFAAKLQEVGAPVLLREETKGGHGGAA--PTAEIARELADLLAFLLRTL 647 (648)
T ss_pred ccccccccchHHHHHHHHHHhcCCceEEEeecCCcccCCC--ChHHHHHHHHHHHHHHHHhh
Confidence 999999999999999988876333 33444468998753 22222334556677777654
No 141
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.20 E-value=1.2e-09 Score=109.72 Aligned_cols=101 Identities=12% Similarity=0.080 Sum_probs=82.6
Q ss_pred ceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEEE
Q 018375 42 KAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFL 121 (357)
Q Consensus 42 ~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l 121 (357)
.++++++||++++...| ..++..|... +.|++++.+|++.+.. ..++++++++++.+.++.+. ...++++
T Consensus 1068 ~~~l~~lh~~~g~~~~~-~~l~~~l~~~-~~v~~~~~~g~~~~~~---~~~~l~~la~~~~~~i~~~~-----~~~p~~l 1137 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQF-SVLSRYLDPQ-WSIYGIQSPRPDGPMQ---TATSLDEVCEAHLATLLEQQ-----PHGPYHL 1137 (1296)
T ss_pred CCCeEEecCCCCchHHH-HHHHHhcCCC-CcEEEEECCCCCCCCC---CCCCHHHHHHHHHHHHHhhC-----CCCCEEE
Confidence 46799999999987766 8888888664 9999999999986532 22488999999988888761 2458999
Q ss_pred EEeChhHHHHHHHHhc---CCCcccEEEEecccc
Q 018375 122 YGESMGGAVTLLLHKK---DPSFWNGAVLVAPMC 152 (357)
Q Consensus 122 vG~S~Gg~~a~~~a~~---~p~~v~~~vl~~~~~ 152 (357)
+|||+||.+|..+|.+ .++++..++++++..
T Consensus 1138 ~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1138 LGYSLGGTLAQGIAARLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred EEechhhHHHHHHHHHHHHcCCceeEEEEecCCC
Confidence 9999999999999975 577899999998743
No 142
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=99.20 E-value=9.3e-09 Score=88.66 Aligned_cols=126 Identities=13% Similarity=0.066 Sum_probs=77.7
Q ss_pred CCcEEEEEEEcCC---CCCceEEEEEccCCccccccHHHHHHHHhhCC----cEEEEeCCCCCc-cCCCCCccccchhhH
Q 018375 26 RGVQLFTCRWLPF---STPKAVVFLCHGYGMECSGFMRECGTRLASAG----YAVFGIDYEGHG-RSRGARCYIKKFENI 97 (357)
Q Consensus 26 ~g~~l~~~~~~p~---~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G----~~vi~~d~~G~G-~s~~~~~~~~~~~~~ 97 (357)
-|....+.+|.|. ..+.|+|+++||-..........+...|.+.| ..++.+|..+.. ++........-.+.+
T Consensus 190 Lg~~r~v~VY~P~~y~~~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l 269 (411)
T PRK10439 190 LGNSRRVWIYTTGDAAPEERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAV 269 (411)
T ss_pred cCCceEEEEEECCCCCCCCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHH
Confidence 4667788888883 24679999999954332222234556666666 346777753211 111001110012223
Q ss_pred HHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEecccc
Q 018375 98 VNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMC 152 (357)
Q Consensus 98 ~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 152 (357)
++++...|+.... ...+.++.+|+|+||||..|+.++.++|+.+.+++.+++..
T Consensus 270 ~~eLlP~I~~~y~-~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 270 QQELLPQVRAIAP-FSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred HHHHHHHHHHhCC-CCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 4455555444311 11245678999999999999999999999999999999864
No 143
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=99.19 E-value=1.2e-08 Score=82.45 Aligned_cols=117 Identities=24% Similarity=0.305 Sum_probs=86.5
Q ss_pred eeeeeEEecCCcEEEEEEEc-CCCCCceEEEEEccCCcccccc------HHHHHHHHhhCCcEEEEeCCCCCccCCCCCc
Q 018375 17 YQEEYIRNARGVQLFTCRWL-PFSTPKAVVFLCHGYGMECSGF------MRECGTRLASAGYAVFGIDYEGHGRSRGARC 89 (357)
Q Consensus 17 ~~~~~~~~~~g~~l~~~~~~-p~~~~~p~vv~lHG~~~~~~~~------~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~ 89 (357)
+.+..+.. |+..|...... |...+...||++-|.++.-+.. ...+.......|.+|+.++|||.|.|.+..
T Consensus 112 ~kRv~Iq~-D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~- 189 (365)
T PF05677_consen 112 VKRVPIQY-DGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP- 189 (365)
T ss_pred eeeEEEee-CCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC-
Confidence 44444444 88888655443 5556778899999987654431 022333334458999999999999998776
Q ss_pred cccchhhHHHHHHHHHHHHHhhh-ccCCccEEEEEeChhHHHHHHHHhcC
Q 018375 90 YIKKFENIVNDCDDFFKSVCAQE-EYTDKARFLYGESMGGAVTLLLHKKD 138 (357)
Q Consensus 90 ~~~~~~~~~~d~~~~l~~l~~~~-~~~~~~v~lvG~S~Gg~~a~~~a~~~ 138 (357)
+.++++.|..+.+++++++. +.+.+++++.|||+||.++..++.++
T Consensus 190 ---s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 190 ---SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred ---CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 56899999999999997743 45678999999999999998876554
No 144
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=99.16 E-value=1.2e-10 Score=96.87 Aligned_cols=115 Identities=14% Similarity=0.160 Sum_probs=75.8
Q ss_pred CCCceEEEEEccCCccc--cccHHHHHHHHhh---CCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhc
Q 018375 39 STPKAVVFLCHGYGMEC--SGFMRECGTRLAS---AGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEE 113 (357)
Q Consensus 39 ~~~~p~vv~lHG~~~~~--~~~~~~~~~~l~~---~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~ 113 (357)
+..+|++|++|||.++. ..|...+...+.. .+++|+++|+...-. ..-...........+.+..+|..|....+
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~-~~Y~~a~~n~~~vg~~la~~l~~L~~~~g 146 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGAS-NNYPQAVANTRLVGRQLAKFLSFLINNFG 146 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHS-S-HHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhcc-ccccchhhhHHHHHHHHHHHHHHHHhhcC
Confidence 45789999999998876 4676777776544 379999999964321 10000011334556677778888876667
Q ss_pred cCCccEEEEEeChhHHHHHHHHhcCCC--cccEEEEecccccc
Q 018375 114 YTDKARFLYGESMGGAVTLLLHKKDPS--FWNGAVLVAPMCKI 154 (357)
Q Consensus 114 ~~~~~v~lvG~S~Gg~~a~~~a~~~p~--~v~~~vl~~~~~~~ 154 (357)
.+.++++|+|||+||.+|-.++..... +|..++.++|+...
T Consensus 147 ~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 147 VPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPL 189 (331)
T ss_dssp --GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TT
T ss_pred CChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccc
Confidence 789999999999999999999987776 89999999998654
No 145
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.11 E-value=8.3e-09 Score=82.01 Aligned_cols=101 Identities=17% Similarity=0.218 Sum_probs=82.9
Q ss_pred eEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEEEE
Q 018375 43 AVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLY 122 (357)
Q Consensus 43 p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lv 122 (357)
|+|+++|+.++....| ..++..|... ..|+.++.||++.-.... .+++++++...+.|..+. +..++.|+
T Consensus 1 ~pLF~fhp~~G~~~~~-~~L~~~l~~~-~~v~~l~a~g~~~~~~~~---~~l~~~a~~yv~~Ir~~Q-----P~GPy~L~ 70 (257)
T COG3319 1 PPLFCFHPAGGSVLAY-APLAAALGPL-LPVYGLQAPGYGAGEQPF---ASLDDMAAAYVAAIRRVQ-----PEGPYVLL 70 (257)
T ss_pred CCEEEEcCCCCcHHHH-HHHHHHhccC-ceeeccccCccccccccc---CCHHHHHHHHHHHHHHhC-----CCCCEEEE
Confidence 4699999999987776 8999999888 999999999998533222 378888888888887773 56799999
Q ss_pred EeChhHHHHHHHHhc---CCCcccEEEEeccccc
Q 018375 123 GESMGGAVTLLLHKK---DPSFWNGAVLVAPMCK 153 (357)
Q Consensus 123 G~S~Gg~~a~~~a~~---~p~~v~~~vl~~~~~~ 153 (357)
|||+||.+|..+|.+ ..+.|..++++++...
T Consensus 71 G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 71 GWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred eeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 999999999999964 3346999999998876
No 146
>KOG3101 consensus Esterase D [General function prediction only]
Probab=99.10 E-value=3.6e-09 Score=78.70 Aligned_cols=211 Identities=18% Similarity=0.234 Sum_probs=121.8
Q ss_pred ecCCcEEEEEEEcC----CCCCceEEEEEccCCccccccHH--HHHHHHhhCCcEEEEeCCCCCccC-----CCC-----
Q 018375 24 NARGVQLFTCRWLP----FSTPKAVVFLCHGYGMECSGFMR--ECGTRLASAGYAVFGIDYEGHGRS-----RGA----- 87 (357)
Q Consensus 24 ~~~g~~l~~~~~~p----~~~~~p~vv~lHG~~~~~~~~~~--~~~~~l~~~G~~vi~~d~~G~G~s-----~~~----- 87 (357)
..-++.+.+-+|.| .+++-|+|.++-|+.+....+.. .+.+.-.++|+.|+.+|-.-.|.. +.-
T Consensus 22 ~tl~c~Mtf~vylPp~a~~~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~G 101 (283)
T KOG3101|consen 22 NTLKCSMTFGVYLPPDAPRGKRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQG 101 (283)
T ss_pred cccccceEEEEecCCCcccCCcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCC
Confidence 33467788888888 33446999999999988766532 234445567999999997543322 100
Q ss_pred Cc---------c--ccc-hhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccc
Q 018375 88 RC---------Y--IKK-FENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKIS 155 (357)
Q Consensus 88 ~~---------~--~~~-~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~ 155 (357)
.+ + .+. ++-.++++.++++.- ...++..++.|.||||||.-|+..+.+.|.+.+++-..+|...+.
T Consensus 102 AGFYvnAt~epw~~~yrMYdYv~kELp~~l~~~--~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~ 179 (283)
T KOG3101|consen 102 AGFYVNATQEPWAKHYRMYDYVVKELPQLLNSA--NVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPI 179 (283)
T ss_pred ceeEEecccchHhhhhhHHHHHHHHHHHHhccc--cccccchhcceeccccCCCceEEEEEcCcccccceeccccccCcc
Confidence 00 0 001 122233444444321 233466789999999999999999999999999988888876543
Q ss_pred cccCChhHHHHHHHHHHhhcccCcccCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccc
Q 018375 156 EKVKPHPVLVNILTRVEEIIPKWKIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMI 235 (357)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 235 (357)
.-.+.. ..+.. ++.+ . ...++.+.. .-+.........
T Consensus 180 ~cpWGq---KAf~g--------------------YLG~-~------------------ka~W~~yDa-t~lik~y~~~~~ 216 (283)
T KOG3101|consen 180 NCPWGQ---KAFTG--------------------YLGD-N------------------KAQWEAYDA-THLIKNYRGVGD 216 (283)
T ss_pred cCcchH---HHhhc--------------------ccCC-C------------------hHHHhhcch-HHHHHhcCCCCc
Confidence 221111 10000 0000 0 000011111 122234455556
Q ss_pred cEEEEeeCCCccCChHH-HHHHHHHccC---CCceEEEcCCCCccccc
Q 018375 236 PFFVLHGEADTVTDPEV-SKALYERASS---RDKTIKLYPGMWHALTS 279 (357)
Q Consensus 236 Pvl~i~g~~D~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~gH~~~~ 279 (357)
-+||=.|+.|.+...+. -+.+.++... ..+.+...+|-+|..++
T Consensus 217 ~ilIdqG~~D~Fl~~qLlPe~l~~a~~~~~~~~v~~r~~~gyDHSYyf 264 (283)
T KOG3101|consen 217 DILIDQGAADNFLAEQLLPENLLEACKATWQAPVVFRLQEGYDHSYYF 264 (283)
T ss_pred cEEEecCccchhhhhhcChHHHHHHhhccccccEEEEeecCCCcceee
Confidence 68999999999876322 2233333332 35667777899998875
No 147
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.09 E-value=3.4e-09 Score=79.47 Aligned_cols=104 Identities=15% Similarity=0.168 Sum_probs=79.8
Q ss_pred ceEEEEEccCCccc--cccHHHHHHHHhhCCcEEEEeCCC----CCccCCCCCccccchhhHHHHHHHHHHHHHhhhccC
Q 018375 42 KAVVFLCHGYGMEC--SGFMRECGTRLASAGYAVFGIDYE----GHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYT 115 (357)
Q Consensus 42 ~p~vv~lHG~~~~~--~~~~~~~~~~l~~~G~~vi~~d~~----G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~ 115 (357)
+--|||+-|++... ..|...+..+|.+.+|.++-+.++ |+|.+ ++.+.++|+..+++++... + .
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~--------slk~D~edl~~l~~Hi~~~-~-f 105 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTF--------SLKDDVEDLKCLLEHIQLC-G-F 105 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccccccccc--------cccccHHHHHHHHHHhhcc-C-c
Confidence 45689999987653 356678899999999999998876 34433 7788899999999987432 1 2
Q ss_pred CccEEEEEeChhHHHHHHHH--hcCCCcccEEEEeccccccc
Q 018375 116 DKARFLYGESMGGAVTLLLH--KKDPSFWNGAVLVAPMCKIS 155 (357)
Q Consensus 116 ~~~v~lvG~S~Gg~~a~~~a--~~~p~~v~~~vl~~~~~~~~ 155 (357)
...|+|+|||.|+.-.+.+. ...+..+.+.|+.+|+.+..
T Consensus 106 St~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 106 STDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred ccceEEEecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 34899999999999877776 34466789999999988754
No 148
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=99.09 E-value=3.7e-09 Score=86.19 Aligned_cols=125 Identities=18% Similarity=0.193 Sum_probs=75.1
Q ss_pred CcEEEEEEEcC----CCCCceEEEEEccCCcccccc-HHHHHHHHhhCC----cEEEEeCCCCCccCC--CC--------
Q 018375 27 GVQLFTCRWLP----FSTPKAVVFLCHGYGMECSGF-MRECGTRLASAG----YAVFGIDYEGHGRSR--GA-------- 87 (357)
Q Consensus 27 g~~l~~~~~~p----~~~~~p~vv~lHG~~~~~~~~-~~~~~~~l~~~G----~~vi~~d~~G~G~s~--~~-------- 87 (357)
|....+.+|.| ...+.|+|+++||.......+ .......+...| ..+|+++..+.+... ..
T Consensus 5 g~~~~~~VylP~~y~~~~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PF00756_consen 5 GRDRRVWVYLPPGYDPSKPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRR 84 (251)
T ss_dssp TEEEEEEEEECTTGGTTTTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCB
T ss_pred CCeEEEEEEECCCCCCCCCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccc
Confidence 55677788888 346689999999962211111 122333334432 456666665544110 00
Q ss_pred ---Cccccch-hhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEecccccc
Q 018375 88 ---RCYIKKF-ENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKI 154 (357)
Q Consensus 88 ---~~~~~~~-~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 154 (357)
......+ +.+.+++...|+.- ......+..|+|+||||..|+.++.++|+.+.+++.++|....
T Consensus 85 ~~~~~~~~~~~~~l~~el~p~i~~~---~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 85 ADDSGGGDAYETFLTEELIPYIEAN---YRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDP 152 (251)
T ss_dssp CTSTTTHHHHHHHHHTHHHHHHHHH---SSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESET
T ss_pred cccCCCCcccceehhccchhHHHHh---cccccceeEEeccCCCcHHHHHHHHhCccccccccccCccccc
Confidence 0000112 22334555554443 3322333899999999999999999999999999999987654
No 149
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=99.06 E-value=6.2e-09 Score=82.29 Aligned_cols=114 Identities=17% Similarity=0.217 Sum_probs=77.3
Q ss_pred CCCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCC---------CC-------------cc-----
Q 018375 38 FSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRG---------AR-------------CY----- 90 (357)
Q Consensus 38 ~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~---------~~-------------~~----- 90 (357)
.+.+.|+|||-||++++...| ..++-.|+.+||.|.+++.|-+-.+.. +. ..
T Consensus 114 k~~k~PvvvFSHGLggsRt~Y-Sa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~i 192 (399)
T KOG3847|consen 114 KNDKYPVVVFSHGLGGSRTLY-SAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHI 192 (399)
T ss_pred CCCCccEEEEecccccchhhH-HHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEe
Confidence 356789999999999996666 899999999999999999987543310 00 00
Q ss_pred -ccchhhHHHHHHHHHHHHHhh---------------------hccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEe
Q 018375 91 -IKKFENIVNDCDDFFKSVCAQ---------------------EEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLV 148 (357)
Q Consensus 91 -~~~~~~~~~d~~~~l~~l~~~---------------------~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~ 148 (357)
......-++++..+++-+... ...+-.++.++|||+||..++...+.+. .+++.|++
T Consensus 193 rNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t-~FrcaI~l 271 (399)
T KOG3847|consen 193 RNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHT-DFRCAIAL 271 (399)
T ss_pred eCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcccc-ceeeeeee
Confidence 001122334454444444321 1123457899999999999888877665 48888888
Q ss_pred ccccc
Q 018375 149 APMCK 153 (357)
Q Consensus 149 ~~~~~ 153 (357)
+.+..
T Consensus 272 D~WM~ 276 (399)
T KOG3847|consen 272 DAWMF 276 (399)
T ss_pred eeeec
Confidence 87643
No 150
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=99.06 E-value=2.7e-09 Score=92.34 Aligned_cols=142 Identities=12% Similarity=0.099 Sum_probs=103.2
Q ss_pred ccceeeeeEEecCCcEEEEEEEcC----CCCCceEEEEEccCCc-cccccHHHHHHHHhhCCcEEEEeCCCCCccC---C
Q 018375 14 VVEYQEEYIRNARGVQLFTCRWLP----FSTPKAVVFLCHGYGM-ECSGFMRECGTRLASAGYAVFGIDYEGHGRS---R 85 (357)
Q Consensus 14 ~~~~~~~~~~~~~g~~l~~~~~~p----~~~~~p~vv~lHG~~~-~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s---~ 85 (357)
.+..++.++.+.||..+...+... ..+++|.+|..+|..+ +....|..--..|.+.|+.....|.||=|.- .
T Consensus 438 ~y~~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~W 517 (712)
T KOG2237|consen 438 DYVVERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQW 517 (712)
T ss_pred ceEEEEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccch
Confidence 456788899999999887655443 3457898888888543 2222223333345568999999999986543 3
Q ss_pred CCCccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccc
Q 018375 86 GARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKIS 155 (357)
Q Consensus 86 ~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~ 155 (357)
...+....-.+-.+|.++.+++|.++.-....+..+.|.|.||.++..++.++|+.+.++|+-.|+.+..
T Consensus 518 Hk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDvL 587 (712)
T KOG2237|consen 518 HKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDVL 587 (712)
T ss_pred hhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceehh
Confidence 3333222334556788888888887666677899999999999999999999999999999998887643
No 151
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=99.04 E-value=8.7e-10 Score=85.63 Aligned_cols=89 Identities=25% Similarity=0.335 Sum_probs=56.3
Q ss_pred EEEEEccCCccc-cccHHHHHHHHhhCCcE---EEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccE
Q 018375 44 VVFLCHGYGMEC-SGFMRECGTRLASAGYA---VFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKAR 119 (357)
Q Consensus 44 ~vv~lHG~~~~~-~~~~~~~~~~l~~~G~~---vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v 119 (357)
+|||+||.+++. ..| ..+++.|.++||. |+++++-........... ....+.+..+.++|+.+.+.. +. +|
T Consensus 3 PVVlVHG~~~~~~~~w-~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~-~~~~~~~~~l~~fI~~Vl~~T--Ga-kV 77 (219)
T PF01674_consen 3 PVVLVHGTGGNAYSNW-STLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNA-HMSCESAKQLRAFIDAVLAYT--GA-KV 77 (219)
T ss_dssp -EEEE--TTTTTCGGC-CHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHH-HB-HHHHHHHHHHHHHHHHHH--T---E
T ss_pred CEEEECCCCcchhhCH-HHHHHHHHHcCCCcceeEeccCCCCCCCCccccc-ccchhhHHHHHHHHHHHHHhh--CC-EE
Confidence 599999999854 455 8999999999999 899998544332211111 112344578888888886554 45 99
Q ss_pred EEEEeChhHHHHHHHHhc
Q 018375 120 FLYGESMGGAVTLLLHKK 137 (357)
Q Consensus 120 ~lvG~S~Gg~~a~~~a~~ 137 (357)
-||||||||.++-.+...
T Consensus 78 DIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 78 DIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp EEEEETCHHHHHHHHHHH
T ss_pred EEEEcCCcCHHHHHHHHH
Confidence 999999999999888753
No 152
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=99.03 E-value=1.6e-09 Score=86.70 Aligned_cols=129 Identities=22% Similarity=0.235 Sum_probs=89.7
Q ss_pred eeeeEEecCCcEEEEEEEc--C--CCCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccc
Q 018375 18 QEEYIRNARGVQLFTCRWL--P--FSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKK 93 (357)
Q Consensus 18 ~~~~~~~~~g~~l~~~~~~--p--~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~ 93 (357)
....+.+.||.+|...... | .++.+..||++-|..+--+. .+...=++.||.|+.++.||++.|.+.+...
T Consensus 215 ~R~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYEv---G~m~tP~~lgYsvLGwNhPGFagSTG~P~p~-- 289 (517)
T KOG1553|consen 215 QRLKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYEV---GVMNTPAQLGYSVLGWNHPGFAGSTGLPYPV-- 289 (517)
T ss_pred eEEEEeecCCcchhheeecCCCCCCCCCceEEEEecCCccceEe---eeecChHHhCceeeccCCCCccccCCCCCcc--
Confidence 3456777888777543332 2 23346678888886553221 2222233568999999999999999876442
Q ss_pred hhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEecccccc
Q 018375 94 FENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKI 154 (357)
Q Consensus 94 ~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 154 (357)
+....+.++++......++..+.+++.|||.||..++.+|..||+ |+++||-+.+-+.
T Consensus 290 --n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtFDDl 347 (517)
T KOG1553|consen 290 --NTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATFDDL 347 (517)
T ss_pred --cchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecchhhh
Confidence 223334445555555567778999999999999999999999998 9999998876543
No 153
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.98 E-value=3.4e-07 Score=76.01 Aligned_cols=199 Identities=17% Similarity=0.257 Sum_probs=123.2
Q ss_pred EEEEEEEcC--CCCCceEEEEEccCCcccc--ccHHHHHHHHhhCCcEEEEeCCCCC--ccCC----------------C
Q 018375 29 QLFTCRWLP--FSTPKAVVFLCHGYGMECS--GFMRECGTRLASAGYAVFGIDYEGH--GRSR----------------G 86 (357)
Q Consensus 29 ~l~~~~~~p--~~~~~p~vv~lHG~~~~~~--~~~~~~~~~l~~~G~~vi~~d~~G~--G~s~----------------~ 86 (357)
.=+-.+|.| .+....+||++||++.+.. .....+...|.+.|+.++++.+|.- .... .
T Consensus 72 ~~flaL~~~~~~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~ 151 (310)
T PF12048_consen 72 ERFLALWRPANSAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQL 151 (310)
T ss_pred EEEEEEEecccCCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCc
Confidence 334455666 4555779999999998753 3346778888899999999998871 1000 0
Q ss_pred CCccc----------cch----hhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCC-cccEEEEeccc
Q 018375 87 ARCYI----------KKF----ENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPS-FWNGAVLVAPM 151 (357)
Q Consensus 87 ~~~~~----------~~~----~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~-~v~~~vl~~~~ 151 (357)
..... ... +....-+.+++..+..+ +..+++|+||+.|+..++.+.+..+. .++++|++++.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~---~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~ 228 (310)
T PF12048_consen 152 SQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQ---GGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAY 228 (310)
T ss_pred CCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCC
Confidence 00000 011 22233344444444332 45669999999999999999987764 48999999987
Q ss_pred cccccccCChhHHHHHHHHHHhhcccCcccCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccC
Q 018375 152 CKISEKVKPHPVLVNILTRVEEIIPKWKIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLS 231 (357)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (357)
...... ...+.+.+.
T Consensus 229 ~p~~~~-----------------------------------------------------------------n~~l~~~la 243 (310)
T PF12048_consen 229 WPQPDR-----------------------------------------------------------------NPALAEQLA 243 (310)
T ss_pred CCcchh-----------------------------------------------------------------hhhHHHHhh
Confidence 542210 023345567
Q ss_pred CccccEEEEeeCCCccCChHH--HHHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHHh
Q 018375 232 KVMIPFFVLHGEADTVTDPEV--SKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDER 300 (357)
Q Consensus 232 ~i~~Pvl~i~g~~D~~~~~~~--~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~ 300 (357)
++++|||=|++.....+-... -+...++....+.+.+.+.+..|... ...+.+.+.|..||+++
T Consensus 244 ~l~iPvLDi~~~~~~~~~~~a~~R~~~a~r~~~~~YrQ~~L~~~~~~~~-----~~~~~l~~rIrGWL~~~ 309 (310)
T PF12048_consen 244 QLKIPVLDIYSADNPASQQTAKQRKQAAKRNKKPDYRQIQLPGLPDNPS-----GWQEQLLRRIRGWLKRH 309 (310)
T ss_pred ccCCCEEEEecCCChHHHHHHHHHHHHHHhccCCCceeEecCCCCCChh-----hHHHHHHHHHHHHHHhh
Confidence 789999988877743322211 12222333324677777777666543 12223899999999875
No 154
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.97 E-value=2.6e-08 Score=85.68 Aligned_cols=187 Identities=15% Similarity=0.167 Sum_probs=120.6
Q ss_pred CceEEEEEccCC--ccccccHHHHHHHHhhCC--cEEEEeCCCCC-ccCCCCCccccchhhHHHHHHHHHHHHH--hhhc
Q 018375 41 PKAVVFLCHGYG--MECSGFMRECGTRLASAG--YAVFGIDYEGH-GRSRGARCYIKKFENIVNDCDDFFKSVC--AQEE 113 (357)
Q Consensus 41 ~~p~vv~lHG~~--~~~~~~~~~~~~~l~~~G--~~vi~~d~~G~-G~s~~~~~~~~~~~~~~~d~~~~l~~l~--~~~~ 113 (357)
..|.+|++||.+ .....|+..+...|.-.| ..|.++|++.- |. .++...++-+..+.++.. ....
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG--------~nI~h~ae~~vSf~r~kvlei~ge 246 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGG--------ANIKHAAEYSVSFDRYKVLEITGE 246 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCC--------cchHHHHHHHHHHhhhhhhhhhcc
Confidence 467899999987 122333334444444333 45667777632 21 145555666666655322 2345
Q ss_pred cCCccEEEEEeChhHHHHHHHHhcCC-CcccEEEEeccccccccccCChhHHHHHHHHHHhhcccCcccCccccchhhcc
Q 018375 114 YTDKARFLYGESMGGAVTLLLHKKDP-SFWNGAVLVAPMCKISEKVKPHPVLVNILTRVEEIIPKWKIVPTKDVIDSAFK 192 (357)
Q Consensus 114 ~~~~~v~lvG~S~Gg~~a~~~a~~~p-~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (357)
++..+|+|+|.|||+.+++.....+- ..|+++|.++=.........
T Consensus 247 fpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgpr--------------------------------- 293 (784)
T KOG3253|consen 247 FPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGPR--------------------------------- 293 (784)
T ss_pred CCCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCccc---------------------------------
Confidence 57889999999999888888876543 34888888875433221100
Q ss_pred ChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCCccCChHHHHHHHHHccCCCceEEEcCC
Q 018375 193 DSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYERASSRDKTIKLYPG 272 (357)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (357)
....+.+-.++.|+|+|.|.+|..+++...+.+.+++.. ..+++++.+
T Consensus 294 -------------------------------girDE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA-~~elhVI~~ 341 (784)
T KOG3253|consen 294 -------------------------------GIRDEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQA-EVELHVIGG 341 (784)
T ss_pred -------------------------------CCcchhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhc-cceEEEecC
Confidence 000123445678999999999999999999999999985 889999999
Q ss_pred CCcccccCC-----CChhhhhHHHHHHHHHHHh
Q 018375 273 MWHALTSGE-----PDENIDIVFGDIIAWLDER 300 (357)
Q Consensus 273 ~gH~~~~~~-----p~~~~~~~~~~i~~fl~~~ 300 (357)
++|.+-... ....+.+|...+.+||.+.
T Consensus 342 adhsmaipk~k~esegltqseVd~~i~~aI~ef 374 (784)
T KOG3253|consen 342 ADHSMAIPKRKVESEGLTQSEVDSAIAQAIKEF 374 (784)
T ss_pred CCccccCCccccccccccHHHHHHHHHHHHHHH
Confidence 999987533 2223444555555555543
No 155
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.95 E-value=2.3e-08 Score=87.31 Aligned_cols=146 Identities=12% Similarity=0.098 Sum_probs=102.8
Q ss_pred CCCccceeeeeEEecCCcEEEEEEEcC----CCCCceEEEEEccCCcc-ccccHHHHHHHHhhCCcEEEEeCCCCCccCC
Q 018375 11 NKTVVEYQEEYIRNARGVQLFTCRWLP----FSTPKAVVFLCHGYGME-CSGFMRECGTRLASAGYAVFGIDYEGHGRSR 85 (357)
Q Consensus 11 ~~~~~~~~~~~~~~~~g~~l~~~~~~p----~~~~~p~vv~lHG~~~~-~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~ 85 (357)
++..+..+.......||++|...+..- .+++.|++|..-|..+. ....+....-.|.++|+.....--||=|.-.
T Consensus 413 dp~~Y~s~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG 492 (682)
T COG1770 413 DPEDYVSRRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELG 492 (682)
T ss_pred ChhHeEEEEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccC
Confidence 334556666777778998877654432 45678988888886443 2233344445677899988888888866543
Q ss_pred CC---CccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEecccccccc
Q 018375 86 GA---RCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISE 156 (357)
Q Consensus 86 ~~---~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~ 156 (357)
.. .+....-.+...|.+++.++|.+..-...+.++++|-|.||++....+...|+.++++|+-.|+.+...
T Consensus 493 ~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvlt 566 (682)
T COG1770 493 RAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLT 566 (682)
T ss_pred hHHHHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhh
Confidence 21 111112233456777888888766555677999999999999999999999999999999999887553
No 156
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=98.94 E-value=1.7e-07 Score=82.41 Aligned_cols=138 Identities=17% Similarity=0.184 Sum_probs=90.0
Q ss_pred cceeeeeEEec--CCcEEEEEEEcCC--CCCceEEEEEccCCccccccHHHHHH-------------------HHhhCCc
Q 018375 15 VEYQEEYIRNA--RGVQLFTCRWLPF--STPKAVVFLCHGYGMECSGFMRECGT-------------------RLASAGY 71 (357)
Q Consensus 15 ~~~~~~~~~~~--~g~~l~~~~~~p~--~~~~p~vv~lHG~~~~~~~~~~~~~~-------------------~l~~~G~ 71 (357)
.+....++... .+..++|+.+... ....|+||++.|.++.++.+ ..+.+ .+.+. .
T Consensus 9 ~~~~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~-g~f~e~GP~~~~~~~~~~l~~n~~sW~~~-a 86 (415)
T PF00450_consen 9 FKQYSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMW-GLFGENGPFRINPDGPYTLEDNPYSWNKF-A 86 (415)
T ss_dssp SEEEEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THH-HHHCTTSSEEEETTSTSEEEE-TT-GGGT-S
T ss_pred ceEEEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceecccc-ccccccCceEEeecccccccccccccccc-c
Confidence 44555666555 6789999988763 35689999999998876654 22110 12222 7
Q ss_pred EEEEeCCC-CCccCCCCCcc--ccchhhHHHHHHHHHHHHHhh-hccCCccEEEEEeChhHHHHHHHHh----cC-----
Q 018375 72 AVFGIDYE-GHGRSRGARCY--IKKFENIVNDCDDFFKSVCAQ-EEYTDKARFLYGESMGGAVTLLLHK----KD----- 138 (357)
Q Consensus 72 ~vi~~d~~-G~G~s~~~~~~--~~~~~~~~~d~~~~l~~l~~~-~~~~~~~v~lvG~S~Gg~~a~~~a~----~~----- 138 (357)
+++-+|.| |.|.|...... ..+.++.++|+..+|+....+ ......+++|.|-|+||..+-.+|. ..
T Consensus 87 n~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~ 166 (415)
T PF00450_consen 87 NLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQ 166 (415)
T ss_dssp EEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--S
T ss_pred ceEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccc
Confidence 89999966 89988765442 346788889999888887654 3345669999999999997666653 22
Q ss_pred -CCcccEEEEecccccc
Q 018375 139 -PSFWNGAVLVAPMCKI 154 (357)
Q Consensus 139 -p~~v~~~vl~~~~~~~ 154 (357)
+-.++++++.+|..+.
T Consensus 167 ~~inLkGi~IGng~~dp 183 (415)
T PF00450_consen 167 PKINLKGIAIGNGWIDP 183 (415)
T ss_dssp TTSEEEEEEEESE-SBH
T ss_pred cccccccceecCccccc
Confidence 2348999999988765
No 157
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.92 E-value=5.7e-09 Score=90.03 Aligned_cols=92 Identities=15% Similarity=0.192 Sum_probs=73.0
Q ss_pred ccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHh
Q 018375 57 GFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHK 136 (357)
Q Consensus 57 ~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~ 136 (357)
.+|..+++.|.+.||.+ ..|++|+|.+.+... ..++..+++.++++.+.+.. +..+++|+||||||.+++.++.
T Consensus 108 ~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~---~~~~~~~~Lk~lIe~~~~~~--g~~kV~LVGHSMGGlva~~fl~ 181 (440)
T PLN02733 108 YYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSN---RLPETMDGLKKKLETVYKAS--GGKKVNIISHSMGGLLVKCFMS 181 (440)
T ss_pred HHHHHHHHHHHHcCCcc-CCCcccCCCCccccc---cHHHHHHHHHHHHHHHHHHc--CCCCEEEEEECHhHHHHHHHHH
Confidence 45589999999999865 889999999876532 34666778888887775432 4689999999999999999998
Q ss_pred cCCC----cccEEEEecccccc
Q 018375 137 KDPS----FWNGAVLVAPMCKI 154 (357)
Q Consensus 137 ~~p~----~v~~~vl~~~~~~~ 154 (357)
.+|+ .|+++|.++++...
T Consensus 182 ~~p~~~~k~I~~~I~la~P~~G 203 (440)
T PLN02733 182 LHSDVFEKYVNSWIAIAAPFQG 203 (440)
T ss_pred HCCHhHHhHhccEEEECCCCCC
Confidence 8876 37999999876543
No 158
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.92 E-value=1.6e-08 Score=80.45 Aligned_cols=113 Identities=19% Similarity=0.236 Sum_probs=75.2
Q ss_pred CCCceEEEEEccCCccccccHHHHHHHHhhCCc--EEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCC
Q 018375 39 STPKAVVFLCHGYGMECSGFMRECGTRLASAGY--AVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTD 116 (357)
Q Consensus 39 ~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~--~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~ 116 (357)
.+.+.++||+||+..+...-....++.....++ .++.+.+|+.|.-..-.....+...-..++..+|+.+... .+.
T Consensus 15 ~~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~--~~~ 92 (233)
T PF05990_consen 15 SPDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARA--PGI 92 (233)
T ss_pred CCCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhc--cCC
Confidence 356789999999988754433344444433334 7999999988763221111113344456777777777443 257
Q ss_pred ccEEEEEeChhHHHHHHHHhc----CC-----CcccEEEEeccccc
Q 018375 117 KARFLYGESMGGAVTLLLHKK----DP-----SFWNGAVLVAPMCK 153 (357)
Q Consensus 117 ~~v~lvG~S~Gg~~a~~~a~~----~p-----~~v~~~vl~~~~~~ 153 (357)
.+|+|++||||+.+.+.+... .+ .++..+++++|-.+
T Consensus 93 ~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid 138 (233)
T PF05990_consen 93 KRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDID 138 (233)
T ss_pred ceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCC
Confidence 899999999999998887632 11 36889999988655
No 159
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.83 E-value=5.1e-07 Score=69.64 Aligned_cols=107 Identities=17% Similarity=0.078 Sum_probs=75.7
Q ss_pred EEEEEccCCccccccHHHHHHHHhhCC-----cEEEEeCCCCC----ccCCCCC----------ccccchhhHHHHHHHH
Q 018375 44 VVFLCHGYGMECSGFMRECGTRLASAG-----YAVFGIDYEGH----GRSRGAR----------CYIKKFENIVNDCDDF 104 (357)
Q Consensus 44 ~vv~lHG~~~~~~~~~~~~~~~l~~~G-----~~vi~~d~~G~----G~s~~~~----------~~~~~~~~~~~d~~~~ 104 (357)
+.||+||.+++.+.. ..++..|...+ --++.+|--|. |.=+... ....+..++...+..+
T Consensus 47 PTIfIhGsgG~asS~-~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~ 125 (288)
T COG4814 47 PTIFIHGSGGTASSL-NGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKA 125 (288)
T ss_pred ceEEEecCCCChhHH-HHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHH
Confidence 578999999998776 78888887763 23556665552 1111100 1112556778889999
Q ss_pred HHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCC-----cccEEEEeccccc
Q 018375 105 FKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPS-----FWNGAVLVAPMCK 153 (357)
Q Consensus 105 l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~-----~v~~~vl~~~~~~ 153 (357)
+.+| +..++..++.+|||||||.-...++..+.. .+..+|.+++.+.
T Consensus 126 msyL--~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 126 MSYL--QKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHH--HHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 9999 445568899999999999998888865432 3889999987765
No 160
>COG3150 Predicted esterase [General function prediction only]
Probab=98.83 E-value=1e-07 Score=68.40 Aligned_cols=93 Identities=13% Similarity=0.141 Sum_probs=61.5
Q ss_pred EEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEe
Q 018375 45 VFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGE 124 (357)
Q Consensus 45 vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~ 124 (357)
||++||+.++....-..+...+.+. |.|-.+.+...... +....++.+..++... +.....|+|.
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~-------~~~~i~y~~p~l~h--~p~~a~~ele~~i~~~------~~~~p~ivGs 66 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDE-------DVRDIEYSTPHLPH--DPQQALKELEKAVQEL------GDESPLIVGS 66 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhc-------cccceeeecCCCCC--CHHHHHHHHHHHHHHc------CCCCceEEee
Confidence 8999999887666533333333222 22222333322222 6778888888888888 5666999999
Q ss_pred ChhHHHHHHHHhcCCCcccEEEEeccccccc
Q 018375 125 SMGGAVTLLLHKKDPSFWNGAVLVAPMCKIS 155 (357)
Q Consensus 125 S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~ 155 (357)
|+||+.|..++.++. +++ |+++|...+.
T Consensus 67 sLGGY~At~l~~~~G--ira-v~~NPav~P~ 94 (191)
T COG3150 67 SLGGYYATWLGFLCG--IRA-VVFNPAVRPY 94 (191)
T ss_pred cchHHHHHHHHHHhC--Chh-hhcCCCcCch
Confidence 999999999998875 443 4566765443
No 161
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.75 E-value=2.3e-07 Score=73.46 Aligned_cols=96 Identities=13% Similarity=0.086 Sum_probs=65.8
Q ss_pred EEccCC--ccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEe
Q 018375 47 LCHGYG--MECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGE 124 (357)
Q Consensus 47 ~lHG~~--~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~ 124 (357)
++|+.+ ++...| ..+...|... +.|++++.+|++.+.... .+++..++.+...+... ....+++++||
T Consensus 2 ~~~~~~~~~~~~~~-~~~~~~l~~~-~~v~~~~~~g~~~~~~~~---~~~~~~~~~~~~~l~~~-----~~~~~~~l~g~ 71 (212)
T smart00824 2 CFPSTAAPSGPHEY-ARLAAALRGR-RDVSALPLPGFGPGEPLP---ASADALVEAQAEAVLRA-----AGGRPFVLVGH 71 (212)
T ss_pred ccCCCCCCCcHHHH-HHHHHhcCCC-ccEEEecCCCCCCCCCCC---CCHHHHHHHHHHHHHHh-----cCCCCeEEEEE
Confidence 344433 333344 7888888764 899999999998765432 24555555554444332 13578999999
Q ss_pred ChhHHHHHHHHhc---CCCcccEEEEecccc
Q 018375 125 SMGGAVTLLLHKK---DPSFWNGAVLVAPMC 152 (357)
Q Consensus 125 S~Gg~~a~~~a~~---~p~~v~~~vl~~~~~ 152 (357)
|+||.++..++.+ .+..+.+++++++..
T Consensus 72 s~Gg~~a~~~a~~l~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 72 SSGGLLAHAVAARLEARGIPPAAVVLLDTYP 102 (212)
T ss_pred CHHHHHHHHHHHHHHhCCCCCcEEEEEccCC
Confidence 9999999888865 455689998887644
No 162
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=98.73 E-value=1.3e-06 Score=73.06 Aligned_cols=128 Identities=17% Similarity=0.178 Sum_probs=83.3
Q ss_pred CCcEEEEEEEcC-CCCCceEEEEEccCCcccc-ccHHHHHHHHhhC-CcEEEEeCCCCCccCCCCC--------------
Q 018375 26 RGVQLFTCRWLP-FSTPKAVVFLCHGYGMECS-GFMRECGTRLASA-GYAVFGIDYEGHGRSRGAR-------------- 88 (357)
Q Consensus 26 ~g~~l~~~~~~p-~~~~~p~vv~lHG~~~~~~-~~~~~~~~~l~~~-G~~vi~~d~~G~G~s~~~~-------------- 88 (357)
...+|.|++.-. ....+..|+++.|+|++.. .+++.+.+.+|+. +..|+.++|-|+|......
T Consensus 18 R~sKLEyri~ydd~Ke~kaIvfiI~GfG~dan~~~~d~~r~~iA~~fnvv~I~V~YHCf~~R~q~~A~~~~~~~D~~iLk 97 (403)
T PF11144_consen 18 RESKLEYRISYDDEKEIKAIVFIIPGFGADANSNYLDFMREYIAKKFNVVVISVNYHCFCNRPQYGAKFYFDDIDKEILK 97 (403)
T ss_pred ccceeeEEeecCCCCCceEEEEEeCCcCCCcchHHHHHHHHHHHHhCCEEEEEeeeeheeeccccCchhcCCHHHHHHHH
Confidence 346788887443 4556778999999999877 4456777888876 3345666777766432110
Q ss_pred ------c----cccc---hh-------------------------------------------hHHHHHHHHHHHHHhhh
Q 018375 89 ------C----YIKK---FE-------------------------------------------NIVNDCDDFFKSVCAQE 112 (357)
Q Consensus 89 ------~----~~~~---~~-------------------------------------------~~~~d~~~~l~~l~~~~ 112 (357)
. ...+ .. -.+-|+..++..+....
T Consensus 98 ~~L~~i~i~~~~i~~~~~~~~~~~~L~~~I~~lK~~~~L~~d~kl~ls~tl~P~n~EYQN~GIMqAiD~INAl~~l~k~~ 177 (403)
T PF11144_consen 98 KSLEKINIDSESINTYDNAEQIYELLNQNITELKEQGILPQDYKLNLSCTLIPPNGEYQNFGIMQAIDIINALLDLKKIF 177 (403)
T ss_pred HHHHHcCccccccccchhHHHHHHHHHHHHHHHHhcCCCCCCcEEeEEEEecCCchhhhhhHHHHHHHHHHHHHHHHHhh
Confidence 0 0000 00 12335555555554432
Q ss_pred ccCC--ccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccc
Q 018375 113 EYTD--KARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCK 153 (357)
Q Consensus 113 ~~~~--~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 153 (357)
.... -|++++|+|.||++|...|.-.|..+++++=-+++..
T Consensus 178 ~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~ 220 (403)
T PF11144_consen 178 PKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYAL 220 (403)
T ss_pred hcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCcccc
Confidence 2222 4899999999999999999999999999887776654
No 163
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.71 E-value=1.6e-06 Score=74.14 Aligned_cols=88 Identities=19% Similarity=0.278 Sum_probs=65.6
Q ss_pred HHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCC
Q 018375 61 ECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPS 140 (357)
Q Consensus 61 ~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~ 140 (357)
.+...|. .|+.|+.+.+.-. +.++ .++++.......+++.+..... +..+++|+|.|.||..++.+|+.+|+
T Consensus 92 evG~AL~-~GHPvYFV~F~p~----P~pg--QTl~DV~~ae~~Fv~~V~~~hp-~~~kp~liGnCQgGWa~~mlAA~~Pd 163 (581)
T PF11339_consen 92 EVGVALR-AGHPVYFVGFFPE----PEPG--QTLEDVMRAEAAFVEEVAERHP-DAPKPNLIGNCQGGWAAMMLAALRPD 163 (581)
T ss_pred HHHHHHH-cCCCeEEEEecCC----CCCC--CcHHHHHHHHHHHHHHHHHhCC-CCCCceEEeccHHHHHHHHHHhcCcC
Confidence 4555554 5898888876422 1222 3777777777788888766544 23389999999999999999999999
Q ss_pred cccEEEEecccccccc
Q 018375 141 FWNGAVLVAPMCKISE 156 (357)
Q Consensus 141 ~v~~~vl~~~~~~~~~ 156 (357)
.+.-+|+-+++.+...
T Consensus 164 ~~gplvlaGaPlsywa 179 (581)
T PF11339_consen 164 LVGPLVLAGAPLSYWA 179 (581)
T ss_pred ccCceeecCCCccccc
Confidence 9999999888776654
No 164
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.70 E-value=7.1e-08 Score=86.75 Aligned_cols=122 Identities=20% Similarity=0.165 Sum_probs=78.7
Q ss_pred EEEEEEEcCC----CCCceEEEEEccCCccccccHHHHHHHHhhC--CcEEEEeCCC-C---CccCCCCCccccchhhHH
Q 018375 29 QLFTCRWLPF----STPKAVVFLCHGYGMECSGFMRECGTRLASA--GYAVFGIDYE-G---HGRSRGARCYIKKFENIV 98 (357)
Q Consensus 29 ~l~~~~~~p~----~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~--G~~vi~~d~~-G---~G~s~~~~~~~~~~~~~~ 98 (357)
-|+..+|.|. .++.|+||++||.+.....-.......|+.. |+.|++++|| | +..+.... .....-.
T Consensus 78 cl~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~~~~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~---~~~n~g~ 154 (493)
T cd00312 78 CLYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGSLYPGDGLAREGDNVIVVSINYRLGVLGFLSTGDIE---LPGNYGL 154 (493)
T ss_pred CCeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCCCCChHHHHhcCCCEEEEEecccccccccccCCCCC---CCcchhH
Confidence 5677788883 3567999999996432111000012334433 3999999999 3 33222111 1122235
Q ss_pred HHHHHHHHHHHhh---hccCCccEEEEEeChhHHHHHHHHhc--CCCcccEEEEeccccc
Q 018375 99 NDCDDFFKSVCAQ---EEYTDKARFLYGESMGGAVTLLLHKK--DPSFWNGAVLVAPMCK 153 (357)
Q Consensus 99 ~d~~~~l~~l~~~---~~~~~~~v~lvG~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~ 153 (357)
.|...+++++.+. .+.+.++|.|+|+|.||.++..++.. .+..++++|+.++...
T Consensus 155 ~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 155 KDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred HHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 6888888888664 24577899999999999998888765 3446899999887654
No 165
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.66 E-value=1.1e-06 Score=73.61 Aligned_cols=251 Identities=20% Similarity=0.189 Sum_probs=129.0
Q ss_pred cEEEEEEEcCCC----CCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCcc---------ccch
Q 018375 28 VQLFTCRWLPFS----TPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCY---------IKKF 94 (357)
Q Consensus 28 ~~l~~~~~~p~~----~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~---------~~~~ 94 (357)
..+...++.|.+ .+.|.+++.||+++..... ...+..++..++.++..+....|.+...... ....
T Consensus 31 ~~~~~~l~~p~~~~~~~~~p~v~~~h~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 109 (299)
T COG1073 31 IALAAVLHLPPSGNEEKKLPAVVFLHGFGSSKEQS-LGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSA 109 (299)
T ss_pred ceeeeEEEecCCCCccccCceEEeccCccccccCc-chHHHHhhhceeEEeeeccccccccccccccccCccccccccch
Confidence 556667777743 4688999999999887665 3477788888888777775333222211000 0000
Q ss_pred hhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCC--cccEEEEeccccccccccCChhH-HHHHHHHH
Q 018375 95 ENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPS--FWNGAVLVAPMCKISEKVKPHPV-LVNILTRV 171 (357)
Q Consensus 95 ~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~--~v~~~vl~~~~~~~~~~~~~~~~-~~~~~~~~ 171 (357)
.....+...++..-.........+....|.++|+..+..++...+. ....+++++.............. ........
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~g~~~~~~~~~~~~~~~~~~~ 189 (299)
T COG1073 110 AVLLLLSEGVLDKDYRLLGASLGPRILAGLSLGGPSAGALLAWGPTRLDASRIVVWGESLGGALALLLLGANPELARELI 189 (299)
T ss_pred hheeeeccccccHHHHHHhhhcCcceEEEEEeeccchHHHhhcchhHHHhhcccceeeccCceeeccccccchHHHHhhh
Confidence 0000000000000000011134788999999999999888877763 23334443332222111110000 00000011
Q ss_pred HhhcccCcccCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCcc-ccEEEEeeCCCccCCh
Q 018375 172 EEIIPKWKIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVM-IPFFVLHGEADTVTDP 250 (357)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~Pvl~i~g~~D~~~~~ 250 (357)
............ ... ...+.... .. .......+....+.++. +|+|+++|.+|..+|.
T Consensus 190 ~~~~~~~~~~~~-------~~~----------~~~~~~~~-~~---~~~~~~~d~~~~~~~i~~~P~l~~~G~~D~~vp~ 248 (299)
T COG1073 190 DYLITPGGFAPL-------PAP----------EAPLDTLP-LR---AVLLLLLDPFDDAEKISPRPVLLVHGERDEVVPL 248 (299)
T ss_pred hhhccCCCCCCC-------Ccc----------cccccccc-cc---hhhhccCcchhhHhhcCCcceEEEecCCCcccch
Confidence 111110000000 000 00000000 00 00001122233344454 7999999999999999
Q ss_pred HHHHHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHHhc
Q 018375 251 EVSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDERM 301 (357)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~ 301 (357)
..+..+++.....+.+...+++++|........ ...+....+.+|+.+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 249 RDAEDLYEAARERPKKLLFVPGGGHIDLYDNPP-AVEQALDKLAEFLERHL 298 (299)
T ss_pred hhhHHHHhhhccCCceEEEecCCccccccCccH-HHHHHHHHHHHHHHHhc
Confidence 999999988874357888889999988753332 23458899999998765
No 166
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.57 E-value=1.6e-06 Score=76.59 Aligned_cols=114 Identities=18% Similarity=0.188 Sum_probs=74.6
Q ss_pred CceEEEEEccCCcccccc-HHHHHHHHhhC-CcEEEEeCCCCCccCCCCCc------cccchhhHHHHHHHHHHHHHhhh
Q 018375 41 PKAVVFLCHGYGMECSGF-MRECGTRLASA-GYAVFGIDYEGHGRSRGARC------YIKKFENIVNDCDDFFKSVCAQE 112 (357)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~-~~~~~~~l~~~-G~~vi~~d~~G~G~s~~~~~------~~~~~~~~~~d~~~~l~~l~~~~ 112 (357)
+.|++|++-|=+.-...+ ...+...|+++ |-.|++++.|-+|.|.+... ...+.++..+|+..+++++..+.
T Consensus 28 ~gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~ 107 (434)
T PF05577_consen 28 GGPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKY 107 (434)
T ss_dssp TSEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhh
Confidence 378777776643322111 12244445544 78999999999999975422 12377899999999999997543
Q ss_pred -ccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEecccccc
Q 018375 113 -EYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKI 154 (357)
Q Consensus 113 -~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 154 (357)
.....|++++|-|+||.+|..+-.++|+.|.+.+.-+++...
T Consensus 108 ~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~a 150 (434)
T PF05577_consen 108 NTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQA 150 (434)
T ss_dssp TTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CCH
T ss_pred cCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceeee
Confidence 235569999999999999999999999999999998887654
No 167
>COG0627 Predicted esterase [General function prediction only]
Probab=98.53 E-value=3e-06 Score=70.03 Aligned_cols=232 Identities=17% Similarity=0.203 Sum_probs=120.0
Q ss_pred CCCceEEEEEccCCcccccc--HHHHHHHHhhCCcEEEEeCCC--------------CCccCCCCC------cc-ccchh
Q 018375 39 STPKAVVFLCHGYGMECSGF--MRECGTRLASAGYAVFGIDYE--------------GHGRSRGAR------CY-IKKFE 95 (357)
Q Consensus 39 ~~~~p~vv~lHG~~~~~~~~--~~~~~~~l~~~G~~vi~~d~~--------------G~G~s~~~~------~~-~~~~~ 95 (357)
+.+-|+++++||..++...+ ...+-......|+.++++|-. |-+.|-... .. .+.++
T Consensus 51 ~~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~ 130 (316)
T COG0627 51 GRDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWE 130 (316)
T ss_pred CCCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchh
Confidence 35678999999998775333 234445555668888887433 222221100 00 12333
Q ss_pred hH-HHHHHHHHHHHHhhhccCC--ccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHHHHH
Q 018375 96 NI-VNDCDDFFKSVCAQEEYTD--KARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTRVE 172 (357)
Q Consensus 96 ~~-~~d~~~~l~~l~~~~~~~~--~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (357)
++ .+++-..++... .... ++..++||||||.-|+.+|+++|++++.+..++|........... .
T Consensus 131 tfl~~ELP~~~~~~f---~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s~~~~~~----------~ 197 (316)
T COG0627 131 TFLTQELPALWEAAF---PADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPSSPWGPT----------L 197 (316)
T ss_pred HHHHhhhhHHHHHhc---CcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccccccccc----------c
Confidence 32 344443443321 1112 378999999999999999999999999999999987765332221 0
Q ss_pred hhcccCcccCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhh--hhHhhccCCccccEEEEeeCCCccCC-
Q 018375 173 EIIPKWKIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTS--MSLEDSLSKVMIPFFVLHGEADTVTD- 249 (357)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~Pvl~i~g~~D~~~~- 249 (357)
.....|.... ...++...... .......... ...+... ...... .....++++-+|..|.+..
T Consensus 198 ~~~~~~g~~~----~~~~~G~~~~~--------~w~~~D~~~~-~~~l~~~~~~~~~~~-~~~~~~~~~d~g~ad~~~~~ 263 (316)
T COG0627 198 AMGDPWGGKA----FNAMLGPDSDP--------AWQENDPLSL-IEKLVANANTRIWVY-GGSPPELLIDNGPADFFLAA 263 (316)
T ss_pred cccccccCcc----HHHhcCCCccc--------cccccCchhH-HHHhhhcccccceec-ccCCCccccccccchhhhhh
Confidence 0000000000 00000000000 0000000000 0000000 000011 1134567777888887764
Q ss_pred -hHHHHHHHHHccC--CCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHHhccc
Q 018375 250 -PEVSKALYERASS--RDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDERMSD 303 (357)
Q Consensus 250 -~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~~~ 303 (357)
....+.+.+++.. -+..+...++++|... ++....+....|+...+..
T Consensus 264 ~~~~~~~~~~a~~~~g~~~~~~~~~~G~Hsw~------~w~~~l~~~~~~~a~~l~~ 314 (316)
T COG0627 264 NNLSTRAFAEALRAAGIPNGVRDQPGGDHSWY------FWASQLADHLPWLAGALGL 314 (316)
T ss_pred cccCHHHHHHHHHhcCCCceeeeCCCCCcCHH------HHHHHHHHHHHHHHHHhcc
Confidence 2234555555542 2456666688899877 4666888888888877653
No 168
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.53 E-value=6.7e-07 Score=76.19 Aligned_cols=123 Identities=21% Similarity=0.189 Sum_probs=80.4
Q ss_pred EEEEEEEcCC--CCCceEEEEEccCCc---c-ccccHHHHHHHHhhCC-cEEEEeCCCC--CccCCCCC---ccccchhh
Q 018375 29 QLFTCRWLPF--STPKAVVFLCHGYGM---E-CSGFMRECGTRLASAG-YAVFGIDYEG--HGRSRGAR---CYIKKFEN 96 (357)
Q Consensus 29 ~l~~~~~~p~--~~~~p~vv~lHG~~~---~-~~~~~~~~~~~l~~~G-~~vi~~d~~G--~G~s~~~~---~~~~~~~~ 96 (357)
-|+..+|.|. ..+.|++|+|||.+. + +..+++ ...|+++| +.||+++||= +|.-+... .....-.-
T Consensus 79 CL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~yd--gs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~ 156 (491)
T COG2272 79 CLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYD--GSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNL 156 (491)
T ss_pred ceeEEeeccCCCCCCCcEEEEEeccccccCCCcccccC--hHHHHhcCCEEEEEeCcccccceeeehhhccccccccccc
Confidence 4677788884 445699999999642 2 222223 36788888 9999999992 12111110 00001112
Q ss_pred HHHHHHHHHHHHHhh---hccCCccEEEEEeChhHHHHHHHHhc--CCCcccEEEEeccccc
Q 018375 97 IVNDCDDFFKSVCAQ---EEYTDKARFLYGESMGGAVTLLLHKK--DPSFWNGAVLVAPMCK 153 (357)
Q Consensus 97 ~~~d~~~~l~~l~~~---~~~~~~~v~lvG~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~ 153 (357)
-..|+..+|+|++++ .+-+.++|.|+|+|.||+.++.+.+. ....+.++|+.++...
T Consensus 157 Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 157 GLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred cHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 356788888888663 34578899999999999988777643 2235888888888765
No 169
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.51 E-value=3e-06 Score=68.46 Aligned_cols=226 Identities=11% Similarity=0.047 Sum_probs=113.2
Q ss_pred EEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEe
Q 018375 45 VFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGE 124 (357)
Q Consensus 45 vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~ 124 (357)
+|++=||.+..........+...+.|+.++.+-.+........ ......++. +++.+.+.......++.+-.+
T Consensus 2 lvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~----~~~~~~~~~---l~~~l~~~~~~~~~~il~H~F 74 (240)
T PF05705_consen 2 LVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWPS----KRLAPAADK---LLELLSDSQSASPPPILFHSF 74 (240)
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeeec----cchHHHHHH---HHHHhhhhccCCCCCEEEEEE
Confidence 6777788776555556667777778999999876643222111 122333333 333333222111238999999
Q ss_pred ChhHHHHHHHHh-----cC-----CCcccEEEEeccccccccccCChhHHHHHHHHHHhhcccCcccCccccchhhccCh
Q 018375 125 SMGGAVTLLLHK-----KD-----PSFWNGAVLVAPMCKISEKVKPHPVLVNILTRVEEIIPKWKIVPTKDVIDSAFKDS 194 (357)
Q Consensus 125 S~Gg~~a~~~a~-----~~-----p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (357)
|.||...+.... .. -.+++++|+-+++....... . ...+...++...... ......+...
T Consensus 75 SnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~----~----~~~~~~~~~~~~~~~--~~~~~~~~~~ 144 (240)
T PF05705_consen 75 SNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSS----S----ARAFSAALPKSSPRW--FVPLWPLLQF 144 (240)
T ss_pred ECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCcccccc----H----HHHHHHHcCccchhh--HHHHHHHHHH
Confidence 998876655433 11 12388888777664332110 0 001111111100000 0000000000
Q ss_pred hHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCCccCChHHHHHHHHHccC--CCceEEEcCC
Q 018375 195 IKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYERASS--RDKTIKLYPG 272 (357)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 272 (357)
......... ........... ..... .........+|-|+++++.|.+++.+..++..+.... .+++...+++
T Consensus 145 ~~~~~~~~~--~~~~~~~~~~~---~~~~~-~~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~ 218 (240)
T PF05705_consen 145 LLRLSIISY--FIFGYPDVQEY---YRRAL-NDFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFED 218 (240)
T ss_pred HHHHHHHHH--HHhcCCcHHHH---HHHHH-hhhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCC
Confidence 000000000 00000000000 00000 0111234468999999999999999988887766543 3588888999
Q ss_pred CCccccc-CCCChhhhhHHHHHHHHH
Q 018375 273 MWHALTS-GEPDENIDIVFGDIIAWL 297 (357)
Q Consensus 273 ~gH~~~~-~~p~~~~~~~~~~i~~fl 297 (357)
+.|..++ .+|++ .++.+.+|+
T Consensus 219 S~HV~H~r~~p~~----Y~~~v~~fw 240 (240)
T PF05705_consen 219 SPHVAHLRKHPDR----YWRAVDEFW 240 (240)
T ss_pred CchhhhcccCHHH----HHHHHHhhC
Confidence 9998875 45666 777777764
No 170
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.50 E-value=1.2e-06 Score=71.48 Aligned_cols=112 Identities=14% Similarity=0.210 Sum_probs=76.6
Q ss_pred CCceEEEEEccCCccccccHHHHHHHHhhCCc--EEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCc
Q 018375 40 TPKAVVFLCHGYGMECSGFMRECGTRLASAGY--AVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDK 117 (357)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~--~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~ 117 (357)
..+.++||+||+..+-..--...++...+.|+ ..+.+.+|..|.--.-.....+...-..++..+|+.|.... +.+
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~--~~~ 191 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDK--PVK 191 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCC--CCc
Confidence 45788999999987644333455666666554 66888888766532211111244455678889999995543 478
Q ss_pred cEEEEEeChhHHHHHHHHhc--------CCCcccEEEEeccccc
Q 018375 118 ARFLYGESMGGAVTLLLHKK--------DPSFWNGAVLVAPMCK 153 (357)
Q Consensus 118 ~v~lvG~S~Gg~~a~~~a~~--------~p~~v~~~vl~~~~~~ 153 (357)
+|+|++||||..+++....+ .+.+|+-+|+-+|-.+
T Consensus 192 ~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD 235 (377)
T COG4782 192 RIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDID 235 (377)
T ss_pred eEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCC
Confidence 99999999999999887632 2345888888887654
No 171
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.48 E-value=5.6e-07 Score=71.04 Aligned_cols=94 Identities=14% Similarity=0.078 Sum_probs=49.7
Q ss_pred CCceEEEEEccCCccccccHHHHHHHHhhC--CcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCc
Q 018375 40 TPKAVVFLCHGYGMECSGFMRECGTRLASA--GYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDK 117 (357)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~--G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~ 117 (357)
++.-.|||+||+.++...| ..+...+... .+.-..+...++....... ...++..++.+.+-|............
T Consensus 2 ~~~hLvV~vHGL~G~~~d~-~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~T--~~gI~~~g~rL~~eI~~~~~~~~~~~~ 78 (217)
T PF05057_consen 2 KPVHLVVFVHGLWGNPADM-RYLKNHLEKIPEDLPNARIVVLGYSNNEFKT--FDGIDVCGERLAEEILEHIKDYESKIR 78 (217)
T ss_pred CCCEEEEEeCCCCCCHHHH-HHHHHHHHHhhhhcchhhhhhhccccccccc--chhhHHHHHHHHHHHHHhccccccccc
Confidence 3456899999999997776 6666666551 1211122222221111111 113444444433333332222121246
Q ss_pred cEEEEEeChhHHHHHHHHh
Q 018375 118 ARFLYGESMGGAVTLLLHK 136 (357)
Q Consensus 118 ~v~lvG~S~Gg~~a~~~a~ 136 (357)
++.+|||||||.++-.+..
T Consensus 79 ~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 79 KISFIGHSLGGLIARYALG 97 (217)
T ss_pred cceEEEecccHHHHHHHHH
Confidence 8999999999998865553
No 172
>PLN02209 serine carboxypeptidase
Probab=98.47 E-value=4.3e-05 Score=66.58 Aligned_cols=138 Identities=17% Similarity=0.166 Sum_probs=84.9
Q ss_pred cceeeeeEEec--CCcEEEEEEEcCC--CCCceEEEEEccCCccccccHHHHH---H-------------H-------Hh
Q 018375 15 VEYQEEYIRNA--RGVQLFTCRWLPF--STPKAVVFLCHGYGMECSGFMRECG---T-------------R-------LA 67 (357)
Q Consensus 15 ~~~~~~~~~~~--~g~~l~~~~~~p~--~~~~p~vv~lHG~~~~~~~~~~~~~---~-------------~-------l~ 67 (357)
.+....++... .+..++|..+... ....|+|+++-|.++.+..+ ..+. + . +.
T Consensus 37 ~~~~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~-g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~ 115 (437)
T PLN02209 37 FELETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLS-GLFFENGPLALKNKVYNGSVPSLVSTTYSWT 115 (437)
T ss_pred eeEEEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhh-hHHHhcCCceeccCCCCCCcccceeCCCchh
Confidence 34444555443 3567888777652 23479999999998775543 1111 0 1 11
Q ss_pred hCCcEEEEeCCC-CCccCCCCCc-cccchhhHHHHHHHHHHHHHhh-hccCCccEEEEEeChhHHHHHHHHhc----C--
Q 018375 68 SAGYAVFGIDYE-GHGRSRGARC-YIKKFENIVNDCDDFFKSVCAQ-EEYTDKARFLYGESMGGAVTLLLHKK----D-- 138 (357)
Q Consensus 68 ~~G~~vi~~d~~-G~G~s~~~~~-~~~~~~~~~~d~~~~l~~l~~~-~~~~~~~v~lvG~S~Gg~~a~~~a~~----~-- 138 (357)
+. .+++-+|.| |.|.|..... ...+-++.++|+..+++....+ ..+...+++|.|.|+||..+-.+|.. .
T Consensus 116 ~~-anllfiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~ 194 (437)
T PLN02209 116 KT-ANIIFLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYI 194 (437)
T ss_pred hc-CcEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhccc
Confidence 22 578999955 8888854322 1123345567887777776543 23345689999999999865555531 1
Q ss_pred ----CCcccEEEEecccccc
Q 018375 139 ----PSFWNGAVLVAPMCKI 154 (357)
Q Consensus 139 ----p~~v~~~vl~~~~~~~ 154 (357)
+-.++++++.++..+.
T Consensus 195 ~~~~~inl~Gi~igng~td~ 214 (437)
T PLN02209 195 CCNPPINLQGYVLGNPITHI 214 (437)
T ss_pred ccCCceeeeeEEecCcccCh
Confidence 1147899999887654
No 173
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.46 E-value=3.1e-06 Score=77.25 Aligned_cols=123 Identities=20% Similarity=0.115 Sum_probs=72.5
Q ss_pred EEEEEEEcCCC----CCceEEEEEccCCcc---ccccHHHHHHHHhhCCcEEEEeCCC----CCccCCCCCccccchhhH
Q 018375 29 QLFTCRWLPFS----TPKAVVFLCHGYGME---CSGFMRECGTRLASAGYAVFGIDYE----GHGRSRGARCYIKKFENI 97 (357)
Q Consensus 29 ~l~~~~~~p~~----~~~p~vv~lHG~~~~---~~~~~~~~~~~l~~~G~~vi~~d~~----G~G~s~~~~~~~~~~~~~ 97 (357)
-|+..+|.|.. .+.|++|++||.+.. .......-...++..++.||+++|| |+-.+...... .-.--
T Consensus 108 CL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~--~gN~G 185 (535)
T PF00135_consen 108 CLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAP--SGNYG 185 (535)
T ss_dssp --EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSH--BSTHH
T ss_pred HHHHhhhhccccccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccC--chhhh
Confidence 57778888821 247999999996432 2111123344566778999999999 33322211110 12333
Q ss_pred HHHHHHHHHHHHhh---hccCCccEEEEEeChhHHHHHHHHhc--CCCcccEEEEeccccc
Q 018375 98 VNDCDDFFKSVCAQ---EEYTDKARFLYGESMGGAVTLLLHKK--DPSFWNGAVLVAPMCK 153 (357)
Q Consensus 98 ~~d~~~~l~~l~~~---~~~~~~~v~lvG~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~ 153 (357)
..|...+|+|+++. .+-+.++|.|+|+|.||..+..++.. ....+.++|+.++...
T Consensus 186 l~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~ 246 (535)
T PF00135_consen 186 LLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSAL 246 (535)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TT
T ss_pred hhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccccc
Confidence 56888888888663 34467899999999999977666543 2357999999998543
No 174
>PLN02606 palmitoyl-protein thioesterase
Probab=98.46 E-value=1.1e-05 Score=65.14 Aligned_cols=102 Identities=17% Similarity=0.115 Sum_probs=66.4
Q ss_pred eEEEEEccCCcc--ccccHHHHHHHHhh-CCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccE
Q 018375 43 AVVFLCHGYGME--CSGFMRECGTRLAS-AGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKAR 119 (357)
Q Consensus 43 p~vv~lHG~~~~--~~~~~~~~~~~l~~-~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v 119 (357)
.+||+.||++.+ ... +..+.+.+.. .|+.+.++. .|-+. .........++++.+.+.|...... ..-+
T Consensus 27 ~PvViwHGlgD~~~~~~-~~~~~~~i~~~~~~pg~~v~-ig~~~---~~s~~~~~~~Qv~~vce~l~~~~~L----~~G~ 97 (306)
T PLN02606 27 VPFVLFHGFGGECSNGK-VSNLTQFLINHSGYPGTCVE-IGNGV---QDSLFMPLRQQASIACEKIKQMKEL----SEGY 97 (306)
T ss_pred CCEEEECCCCcccCCch-HHHHHHHHHhCCCCCeEEEE-ECCCc---ccccccCHHHHHHHHHHHHhcchhh----cCce
Confidence 459999999843 333 3667777742 366555554 23221 1222235566666666666553222 2359
Q ss_pred EEEEeChhHHHHHHHHhcCCC--cccEEEEeccccc
Q 018375 120 FLYGESMGGAVTLLLHKKDPS--FWNGAVLVAPMCK 153 (357)
Q Consensus 120 ~lvG~S~Gg~~a~~~a~~~p~--~v~~~vl~~~~~~ 153 (357)
.++|+|.||.++-.++.+.|+ .|+.+|.+++...
T Consensus 98 naIGfSQGglflRa~ierc~~~p~V~nlISlggph~ 133 (306)
T PLN02606 98 NIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPHA 133 (306)
T ss_pred EEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCcC
Confidence 999999999999999999876 4999999987543
No 175
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.45 E-value=8.7e-06 Score=63.30 Aligned_cols=251 Identities=13% Similarity=0.041 Sum_probs=130.2
Q ss_pred EEEEEEEcCCCCCceEEEEEccCCccccccHH--HHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHH----
Q 018375 29 QLFTCRWLPFSTPKAVVFLCHGYGMECSGFMR--ECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCD---- 102 (357)
Q Consensus 29 ~l~~~~~~p~~~~~p~vv~lHG~~~~~~~~~~--~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~---- 102 (357)
+-++..+.|+ +..+.-|++-|-|.+ .|.+ .+...+..+|...++++-|-+|+...+......++ .+.|+.
T Consensus 101 ~A~~~~liPQ-K~~~KOG~~a~tgdh--~y~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~~~Le-~vtDlf~mG~ 176 (371)
T KOG1551|consen 101 TARVAWLIPQ-KMADLCLSWALTGDH--VYTRRLVLSKPINKREIATMVLEKPFYGQRVPEEQIIHMLE-YVTDLFKMGR 176 (371)
T ss_pred ceeeeeeccc-CcCCeeEEEeecCCc--eeEeeeeecCchhhhcchheeeecccccccCCHHHHHHHHH-HHHHHHHhhH
Confidence 4556666663 345656666665544 2223 34556667788999999999998765432211111 222222
Q ss_pred HHHHHHHhh----hccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHHHHHhhcccC
Q 018375 103 DFFKSVCAQ----EEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTRVEEIIPKW 178 (357)
Q Consensus 103 ~~l~~l~~~----~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (357)
+.|+..... ...+..++.++|-||||.+|......++..|.-+-.+++......... .........+..+....
T Consensus 177 A~I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~~~asvs~te--g~l~~~~s~~~~~~~~t 254 (371)
T KOG1551|consen 177 ATIQEFVKLFTWSSADGLGNLNLVGRSMGGDIANQVGSLHQKPVATAPCLNSSKASVSATE--GLLLQDTSKMKRFNQTT 254 (371)
T ss_pred HHHHHHHHhcccccccCcccceeeeeecccHHHHhhcccCCCCccccccccccccchhhhh--hhhhhhhHHHHhhccCc
Confidence 222222221 122578999999999999999999877765555444443221110000 00000011111111110
Q ss_pred cccCccccchhhccChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCcccc-----EEEEeeCCCccCChHHH
Q 018375 179 KIVPTKDVIDSAFKDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIP-----FFVLHGEADTVTDPEVS 253 (357)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-----vl~i~g~~D~~~~~~~~ 253 (357)
. ......+.......... .......-......++...+-...+....+| +.++.+++|..+|....
T Consensus 255 ~---~~~~~~r~p~Q~~~~~~------~~~srn~~~E~~~~Mr~vmd~~T~v~~fp~Pvdpsl~ivv~A~~D~Yipr~gv 325 (371)
T KOG1551|consen 255 N---KSGYTSRNPAQSYHLLS------KEQSRNSRKESLIFMRGVMDECTHVANFPVPVDPSLIIVVQAKEDAYIPRTGV 325 (371)
T ss_pred c---hhhhhhhCchhhHHHHH------HHhhhcchHHHHHHHHHHHHhhchhhcCCCCCCCCeEEEEEecCCccccccCc
Confidence 0 00000000000000000 0001111122333333333322334444444 57788999999999888
Q ss_pred HHHHHHccCCCceEEEcCCCCccc-ccCCCChhhhhHHHHHHHHHHHhc
Q 018375 254 KALYERASSRDKTIKLYPGMWHAL-TSGEPDENIDIVFGDIIAWLDERM 301 (357)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~gH~~-~~~~p~~~~~~~~~~i~~fl~~~~ 301 (357)
..+.+.. |++++..++ +||.. ++.+-+. +-+.|.+-|++..
T Consensus 326 ~~lQ~~W--Pg~eVr~~e-gGHVsayl~k~dl----fRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 326 RSLQEIW--PGCEVRYLE-GGHVSAYLFKQDL----FRRAIVDGLDRLD 367 (371)
T ss_pred HHHHHhC--CCCEEEEee-cCceeeeehhchH----HHHHHHHHHHhhh
Confidence 8888888 489988888 58864 4556666 7888888887654
No 176
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=98.44 E-value=0.00013 Score=63.56 Aligned_cols=139 Identities=19% Similarity=0.205 Sum_probs=84.8
Q ss_pred cceeeeeEEecC--CcEEEEEEEcC--CCCCceEEEEEccCCcccccc--HHHHHH-------------HH-------hh
Q 018375 15 VEYQEEYIRNAR--GVQLFTCRWLP--FSTPKAVVFLCHGYGMECSGF--MRECGT-------------RL-------AS 68 (357)
Q Consensus 15 ~~~~~~~~~~~~--g~~l~~~~~~p--~~~~~p~vv~lHG~~~~~~~~--~~~~~~-------------~l-------~~ 68 (357)
......++...+ +..++|+.+.. .....|+||++-|.++.++.+ +..+.. .| .+
T Consensus 35 ~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~ 114 (433)
T PLN03016 35 FELETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTK 114 (433)
T ss_pred eeEEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhh
Confidence 455566665543 56788888765 234579999999998765532 111111 11 12
Q ss_pred CCcEEEEeCCC-CCccCCCCCcccc-chhhHHHHHHHHHHHHHhh-hccCCccEEEEEeChhHHHHHHHHhc----C---
Q 018375 69 AGYAVFGIDYE-GHGRSRGARCYIK-KFENIVNDCDDFFKSVCAQ-EEYTDKARFLYGESMGGAVTLLLHKK----D--- 138 (357)
Q Consensus 69 ~G~~vi~~d~~-G~G~s~~~~~~~~-~~~~~~~d~~~~l~~l~~~-~~~~~~~v~lvG~S~Gg~~a~~~a~~----~--- 138 (357)
. .+++-+|.| |.|.|........ +-.+.++|+..++.....+ ..+...+++|+|.|+||..+-.+|.. .
T Consensus 115 ~-anllfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~ 193 (433)
T PLN03016 115 M-ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYIC 193 (433)
T ss_pred c-CcEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccc
Confidence 2 688999955 8888864332211 1123446777666665432 33356789999999999866555532 1
Q ss_pred ---CCcccEEEEecccccc
Q 018375 139 ---PSFWNGAVLVAPMCKI 154 (357)
Q Consensus 139 ---p~~v~~~vl~~~~~~~ 154 (357)
+-.++|+++-+|..+.
T Consensus 194 ~~~~inLkGi~iGNg~t~~ 212 (433)
T PLN03016 194 CEPPINLQGYMLGNPVTYM 212 (433)
T ss_pred cCCcccceeeEecCCCcCc
Confidence 1247899998886544
No 177
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=98.43 E-value=8.9e-06 Score=65.13 Aligned_cols=114 Identities=20% Similarity=0.271 Sum_probs=65.1
Q ss_pred CCCceEEEEEccCCccccccHHHHHHHHhhCC----cEEEEeCCCCCccCCCCC-ccccchhhHHHHHHHHHHHHHhhhc
Q 018375 39 STPKAVVFLCHGYGMECSGFMRECGTRLASAG----YAVFGIDYEGHGRSRGAR-CYIKKFENIVNDCDDFFKSVCAQEE 113 (357)
Q Consensus 39 ~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G----~~vi~~d~~G~G~s~~~~-~~~~~~~~~~~d~~~~l~~l~~~~~ 113 (357)
..+.|+++++||--.....-...+.+.|...| -.++.+|+--.-...... .........++++.-.++.......
T Consensus 95 ~~k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~~n~~~~~~L~~eLlP~v~~~yp~~~ 174 (299)
T COG2382 95 LEKYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYIDVKKRREELHCNEAYWRFLAQELLPYVEERYPTSA 174 (299)
T ss_pred cccccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCCHHHHHHHhcccHHHHHHHHHHhhhhhhccCcccc
Confidence 45689999999843221111123344444443 456666654311000000 0111233334444444443321111
Q ss_pred cCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccc
Q 018375 114 YTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCK 153 (357)
Q Consensus 114 ~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 153 (357)
....-+|+|.|+||.+++..+..+|+.+..++..+|...
T Consensus 175 -~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~ 213 (299)
T COG2382 175 -DADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFW 213 (299)
T ss_pred -cCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccc
Confidence 234568999999999999999999999999999998765
No 178
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.43 E-value=7.7e-07 Score=75.02 Aligned_cols=102 Identities=22% Similarity=0.243 Sum_probs=72.9
Q ss_pred ceEEEEEccCCccccccHHHHHHHHhhCCcE---EEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCcc
Q 018375 42 KAVVFLCHGYGMECSGFMRECGTRLASAGYA---VFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKA 118 (357)
Q Consensus 42 ~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~---vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~ 118 (357)
.-++|++||++.+...| ..+...+...|+. ++.+++++. ..... ....-+++..-+.+++... +.++
T Consensus 59 ~~pivlVhG~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~--~~~~~~ql~~~V~~~l~~~------ga~~ 128 (336)
T COG1075 59 KEPIVLVHGLGGGYGNF-LPLDYRLAILGWLTNGVYAFELSGG-DGTYS--LAVRGEQLFAYVDEVLAKT------GAKK 128 (336)
T ss_pred CceEEEEccCcCCcchh-hhhhhhhcchHHHhccccccccccc-CCCcc--ccccHHHHHHHHHHHHhhc------CCCc
Confidence 34699999997766666 6777778777887 888888865 11111 1112333444444444444 5689
Q ss_pred EEEEEeChhHHHHHHHHhcCC--CcccEEEEeccccc
Q 018375 119 RFLYGESMGGAVTLLLHKKDP--SFWNGAVLVAPMCK 153 (357)
Q Consensus 119 v~lvG~S~Gg~~a~~~a~~~p--~~v~~~vl~~~~~~ 153 (357)
+.++||||||.++..++...+ .+|+.++.++++-.
T Consensus 129 v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~ 165 (336)
T COG1075 129 VNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHH 165 (336)
T ss_pred eEEEeecccchhhHHHHhhcCccceEEEEEEeccCCC
Confidence 999999999999999998887 78999999988654
No 179
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.37 E-value=4.8e-05 Score=58.74 Aligned_cols=80 Identities=21% Similarity=0.310 Sum_probs=52.0
Q ss_pred ceEEEEEccCCccccccHHHHHHHHhhCCcE-EEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEE
Q 018375 42 KAVVFLCHGYGMECSGFMRECGTRLASAGYA-VFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARF 120 (357)
Q Consensus 42 ~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~-vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~ 120 (357)
+..|||+.|||++...+ ..+. ...++. ++++|||.. +++. | + - ..+.+.
T Consensus 11 ~~LilfF~GWg~d~~~f-~hL~---~~~~~D~l~~yDYr~l-----------~~d~---~----~--~------~y~~i~ 60 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPF-SHLI---LPENYDVLICYDYRDL-----------DFDF---D----L--S------GYREIY 60 (213)
T ss_pred CeEEEEEecCCCChHHh-hhcc---CCCCccEEEEecCccc-----------cccc---c----c--c------cCceEE
Confidence 57899999999985544 3321 123454 467888743 1110 1 1 1 468899
Q ss_pred EEEeChhHHHHHHHHhcCCCcccEEEEeccccc
Q 018375 121 LYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCK 153 (357)
Q Consensus 121 lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 153 (357)
|||+|||-.+|..+....| ++..|.+++...
T Consensus 61 lvAWSmGVw~A~~~l~~~~--~~~aiAINGT~~ 91 (213)
T PF04301_consen 61 LVAWSMGVWAANRVLQGIP--FKRAIAINGTPY 91 (213)
T ss_pred EEEEeHHHHHHHHHhccCC--cceeEEEECCCC
Confidence 9999999999988876554 566666665443
No 180
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.36 E-value=9.3e-05 Score=60.00 Aligned_cols=103 Identities=16% Similarity=0.141 Sum_probs=69.8
Q ss_pred eEEEEEccCCccccc-cHHHHHHHHhhC-CcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEE
Q 018375 43 AVVFLCHGYGMECSG-FMRECGTRLASA-GYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARF 120 (357)
Q Consensus 43 p~vv~lHG~~~~~~~-~~~~~~~~l~~~-G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~ 120 (357)
.++|+.||+|.+... -...+.+.+... |..+.++.. |.+ ..........++++.+.+.|...... .+-+.
T Consensus 26 ~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~-~~~s~~~~~~~Qve~vce~l~~~~~l----~~G~n 97 (314)
T PLN02633 26 VPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNG-VGDSWLMPLTQQAEIACEKVKQMKEL----SQGYN 97 (314)
T ss_pred CCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCC-ccccceeCHHHHHHHHHHHHhhchhh----hCcEE
Confidence 349999999876442 235555555442 666666654 333 22333346677777777766664332 23499
Q ss_pred EEEeChhHHHHHHHHhcCCC--cccEEEEeccccc
Q 018375 121 LYGESMGGAVTLLLHKKDPS--FWNGAVLVAPMCK 153 (357)
Q Consensus 121 lvG~S~Gg~~a~~~a~~~p~--~v~~~vl~~~~~~ 153 (357)
++|+|.||.++-.++.+.|+ .|+.+|.+++...
T Consensus 98 aIGfSQGGlflRa~ierc~~~p~V~nlISlggph~ 132 (314)
T PLN02633 98 IVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHA 132 (314)
T ss_pred EEEEccchHHHHHHHHHCCCCCCcceEEEecCCCC
Confidence 99999999999999998886 4999999987543
No 181
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.33 E-value=2.4e-05 Score=65.76 Aligned_cols=159 Identities=14% Similarity=0.176 Sum_probs=101.2
Q ss_pred hccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccccccccCChhHHHHHHHHHHhhcccCcccCccccchhhc
Q 018375 112 EEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKISEKVKPHPVLVNILTRVEEIIPKWKIVPTKDVIDSAF 191 (357)
Q Consensus 112 ~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (357)
.++..++++|.|.|-=|..++..|+.. .||++++-+.-.. ......+......+...|......-...
T Consensus 167 ~~~~i~~FvV~GaSKRGWTtWltaa~D-~RV~aivP~Vid~--------LN~~~~l~h~y~~yG~~ws~a~~dY~~~--- 234 (367)
T PF10142_consen 167 FGVNIEKFVVTGASKRGWTTWLTAAVD-PRVKAIVPIVIDV--------LNMKANLEHQYRSYGGNWSFAFQDYYNE--- 234 (367)
T ss_pred cCCCccEEEEeCCchHhHHHHHhhccC-cceeEEeeEEEcc--------CCcHHHHHHHHHHhCCCCccchhhhhHh---
Confidence 455789999999999999999999854 5788877654221 1111222222222222332211100000
Q ss_pred cChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCCccCChHHHHHHHHHccCCCceEEEcC
Q 018375 192 KDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYERASSRDKTIKLYP 271 (357)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (357)
........+.+.. +....|......++++|.++|.|..|++..+.....++..+++ ...+..+|
T Consensus 235 -----------gi~~~l~tp~f~~----L~~ivDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G-~K~lr~vP 298 (367)
T PF10142_consen 235 -----------GITQQLDTPEFDK----LMQIVDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPG-EKYLRYVP 298 (367)
T ss_pred -----------CchhhcCCHHHHH----HHHhcCHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCC-CeeEEeCC
Confidence 0000111111111 1112344445577799999999999999999999999999996 78999999
Q ss_pred CCCcccccCCCChhhhhHHHHHHHHHHHhccccc
Q 018375 272 GMWHALTSGEPDENIDIVFGDIIAWLDERMSDAN 305 (357)
Q Consensus 272 ~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~~~~~ 305 (357)
+++|.... .. +.+.+..|+........
T Consensus 299 N~~H~~~~---~~----~~~~l~~f~~~~~~~~~ 325 (367)
T PF10142_consen 299 NAGHSLIG---SD----VVQSLRAFYNRIQNGRP 325 (367)
T ss_pred CCCcccch---HH----HHHHHHHHHHHHHcCCC
Confidence 99999874 33 88999999998776543
No 182
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.31 E-value=1.4e-05 Score=66.83 Aligned_cols=108 Identities=18% Similarity=0.284 Sum_probs=72.6
Q ss_pred CCceEEEEEccCCcccccc------HHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhc
Q 018375 40 TPKAVVFLCHGYGMECSGF------MRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEE 113 (357)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~------~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~ 113 (357)
+..|+||++||.|-..... ...+...|. ...++++||.-...- ..+ ..+..+..++.+..++|.+..
T Consensus 120 k~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~~--~~~--~~yPtQL~qlv~~Y~~Lv~~~- 192 (374)
T PF10340_consen 120 KSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSSD--EHG--HKYPTQLRQLVATYDYLVESE- 192 (374)
T ss_pred CCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEeccccccc--cCC--CcCchHHHHHHHHHHHHHhcc-
Confidence 3479999999987543322 122233333 368999998754311 111 245566778888888886333
Q ss_pred cCCccEEEEEeChhHHHHHHHHhc--C---CCcccEEEEeccccccc
Q 018375 114 YTDKARFLYGESMGGAVTLLLHKK--D---PSFWNGAVLVAPMCKIS 155 (357)
Q Consensus 114 ~~~~~v~lvG~S~Gg~~a~~~a~~--~---p~~v~~~vl~~~~~~~~ 155 (357)
+.++|+|+|-|.||.+++.+... . ....+++|+++|+....
T Consensus 193 -G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 193 -GNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred -CCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 56899999999999999888742 1 12368999999998765
No 183
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=98.27 E-value=0.00053 Score=59.50 Aligned_cols=140 Identities=17% Similarity=0.134 Sum_probs=89.0
Q ss_pred ccceeeeeEEec--CCcEEEEEEEcC--CCCCceEEEEEccCCccccccHHHHHHHHh-----hC-------------Cc
Q 018375 14 VVEYQEEYIRNA--RGVQLFTCRWLP--FSTPKAVVFLCHGYGMECSGFMRECGTRLA-----SA-------------GY 71 (357)
Q Consensus 14 ~~~~~~~~~~~~--~g~~l~~~~~~p--~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~-----~~-------------G~ 71 (357)
.+.....++... .+..|+|+.+.. ....+|.||++-|.++.++.. .+...+- .. -.
T Consensus 41 ~f~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~--G~~~E~GPf~v~~~G~tL~~N~ySWnk~a 118 (454)
T KOG1282|consen 41 PFKQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG--GLFEENGPFRVKYNGKTLYLNPYSWNKEA 118 (454)
T ss_pred CcccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh--hhhhhcCCeEEcCCCCcceeCCccccccc
Confidence 355555666554 588999998876 234578999999998865432 2211110 01 14
Q ss_pred EEEEeCCC-CCccCCCCCc--cccchhhHHHHHHHHHHHH-HhhhccCCccEEEEEeChhHHHHHHHHh----cC-----
Q 018375 72 AVFGIDYE-GHGRSRGARC--YIKKFENIVNDCDDFFKSV-CAQEEYTDKARFLYGESMGGAVTLLLHK----KD----- 138 (357)
Q Consensus 72 ~vi~~d~~-G~G~s~~~~~--~~~~~~~~~~d~~~~l~~l-~~~~~~~~~~v~lvG~S~Gg~~a~~~a~----~~----- 138 (357)
.++-+|.| |.|.|-.... ...+-+..++|+..+|... .+...+..+++.|.|-|++|...-.+|. .+
T Consensus 119 NiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~ 198 (454)
T KOG1282|consen 119 NILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCK 198 (454)
T ss_pred cEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccC
Confidence 67888887 6777653332 2224456677777766554 4445567889999999999976555552 22
Q ss_pred C-CcccEEEEeccccccc
Q 018375 139 P-SFWNGAVLVAPMCKIS 155 (357)
Q Consensus 139 p-~~v~~~vl~~~~~~~~ 155 (357)
| -.++|+++-+|..+..
T Consensus 199 ~~iNLkG~~IGNg~td~~ 216 (454)
T KOG1282|consen 199 PNINLKGYAIGNGLTDPE 216 (454)
T ss_pred CcccceEEEecCcccCcc
Confidence 1 2488999888876643
No 184
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=98.26 E-value=9.7e-06 Score=64.93 Aligned_cols=107 Identities=13% Similarity=0.111 Sum_probs=54.7
Q ss_pred ceEEEEEccCCcccc--ccHHHHHHHHhhC--CcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCc
Q 018375 42 KAVVFLCHGYGMECS--GFMRECGTRLASA--GYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDK 117 (357)
Q Consensus 42 ~p~vv~lHG~~~~~~--~~~~~~~~~l~~~--G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~ 117 (357)
..+||+.||+|.+.. .-+..+.+.+.+. |..|.+++.-....++.......+..++++.+.+.+....+. ..
T Consensus 5 ~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L----~~ 80 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIGNDPSEDVENSFFGNVNDQVEQVCEQLANDPEL----AN 80 (279)
T ss_dssp S--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SSSSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGG----TT
T ss_pred CCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEECCCcchhhhhhHHHHHHHHHHHHHHHHhhChhh----hc
Confidence 345999999997632 1224444333322 677888876322111111222224455555555555543221 24
Q ss_pred cEEEEEeChhHHHHHHHHhcCCC-cccEEEEecccc
Q 018375 118 ARFLYGESMGGAVTLLLHKKDPS-FWNGAVLVAPMC 152 (357)
Q Consensus 118 ~v~lvG~S~Gg~~a~~~a~~~p~-~v~~~vl~~~~~ 152 (357)
-++++|+|.||.++-.++.+.|+ .|+.+|.+++..
T Consensus 81 G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph 116 (279)
T PF02089_consen 81 GFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPH 116 (279)
T ss_dssp -EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--T
T ss_pred ceeeeeeccccHHHHHHHHHCCCCCceeEEEecCcc
Confidence 59999999999999999988765 599999998754
No 185
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=98.08 E-value=0.00022 Score=59.42 Aligned_cols=91 Identities=22% Similarity=0.242 Sum_probs=68.6
Q ss_pred CceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEE
Q 018375 41 PKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARF 120 (357)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~ 120 (357)
+...-||+-|-|+-.. .-..+...|.++|+.|+.+|---|-.|.+ +.++.+.|+..++++... .++..++.
T Consensus 259 sd~~av~~SGDGGWr~-lDk~v~~~l~~~gvpVvGvdsLRYfW~~r------tPe~~a~Dl~r~i~~y~~--~w~~~~~~ 329 (456)
T COG3946 259 SDTVAVFYSGDGGWRD-LDKEVAEALQKQGVPVVGVDSLRYFWSER------TPEQIAADLSRLIRFYAR--RWGAKRVL 329 (456)
T ss_pred cceEEEEEecCCchhh-hhHHHHHHHHHCCCceeeeehhhhhhccC------CHHHHHHHHHHHHHHHHH--hhCcceEE
Confidence 4556677777665433 34788999999999999999765555543 678899999999999844 34688999
Q ss_pred EEEeChhHHHHHHHHhcCCC
Q 018375 121 LYGESMGGAVTLLLHKKDPS 140 (357)
Q Consensus 121 lvG~S~Gg~~a~~~a~~~p~ 140 (357)
|+|+|+|+-+.-..-.+.|.
T Consensus 330 liGySfGADvlP~~~n~L~~ 349 (456)
T COG3946 330 LIGYSFGADVLPFAYNRLPP 349 (456)
T ss_pred EEeecccchhhHHHHHhCCH
Confidence 99999999876655555543
No 186
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.07 E-value=0.00012 Score=55.29 Aligned_cols=133 Identities=20% Similarity=0.272 Sum_probs=76.7
Q ss_pred CCCceEEEEEccCCcccc-ccHH--------------HHHHHHhhCCcEEEEeCCCC---CccCC-CCCccccchhhHHH
Q 018375 39 STPKAVVFLCHGYGMECS-GFMR--------------ECGTRLASAGYAVFGIDYEG---HGRSR-GARCYIKKFENIVN 99 (357)
Q Consensus 39 ~~~~p~vv~lHG~~~~~~-~~~~--------------~~~~~l~~~G~~vi~~d~~G---~G~s~-~~~~~~~~~~~~~~ 99 (357)
..+...+|++||.|.-.. .|-+ ++++.-.+.||.|++.+.-- +-.+. .+..+. ..-++
T Consensus 98 t~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyi---rt~ve 174 (297)
T KOG3967|consen 98 TNPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYI---RTPVE 174 (297)
T ss_pred cCccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhc---cchHH
Confidence 345678999999875422 3321 34455556799999887531 11111 111111 12233
Q ss_pred HHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCC--cccEEEEeccccccccccCChhHHHHHHHHHHhhcc
Q 018375 100 DCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPS--FWNGAVLVAPMCKISEKVKPHPVLVNILTRVEEIIP 176 (357)
Q Consensus 100 d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~--~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (357)
.+.-+-..+.. ......+.++.||+||...+.+..+.|+ +|.++.+.+++...+......++............|
T Consensus 175 h~~yvw~~~v~--pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~~~p~a~~~e~~~~n~c~wvasntP 251 (297)
T KOG3967|consen 175 HAKYVWKNIVL--PAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAMGSPQAKNKEYLCDNACDWVASNTP 251 (297)
T ss_pred HHHHHHHHHhc--ccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccccCchhcCccHHHHHHhhhhhcCCC
Confidence 33333333311 1146789999999999999999998875 588888877776555444444444444444433333
No 187
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=98.07 E-value=5.3e-05 Score=63.07 Aligned_cols=106 Identities=16% Similarity=0.149 Sum_probs=78.1
Q ss_pred eEEEEEccCCcccccc------HHHHHHHHhhCCcEEEEeCCCCCccCCCCCc---------cccchhhHHHHHHHHHHH
Q 018375 43 AVVFLCHGYGMECSGF------MRECGTRLASAGYAVFGIDYEGHGRSRGARC---------YIKKFENIVNDCDDFFKS 107 (357)
Q Consensus 43 p~vv~lHG~~~~~~~~------~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~---------~~~~~~~~~~d~~~~l~~ 107 (357)
.+|+|.-|.-++...+ +..+++.| +--+|.++.|-+|+|-+-.. ...+.++..+|...+|..
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~---~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~ 157 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPEL---KALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTF 157 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhh---CceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHH
Confidence 4488888876653322 23444444 56789999999999864211 112567888899999999
Q ss_pred HHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccc
Q 018375 108 VCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPM 151 (357)
Q Consensus 108 l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 151 (357)
++........+|+.+|-|+||++|..+=.+||..+.|...-+++
T Consensus 158 lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAP 201 (492)
T KOG2183|consen 158 LKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAP 201 (492)
T ss_pred HhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCc
Confidence 97765555789999999999999999999999988777665543
No 188
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.06 E-value=0.00012 Score=65.99 Aligned_cols=106 Identities=16% Similarity=0.166 Sum_probs=62.6
Q ss_pred ceEEEEEccCCccccccHHHHHHHHh----------------hCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHH
Q 018375 42 KAVVFLCHGYGMECSGFMRECGTRLA----------------SAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFF 105 (357)
Q Consensus 42 ~p~vv~lHG~~~~~~~~~~~~~~~l~----------------~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l 105 (357)
+-+|+|++|..|+...- +.++.... ...|+.+++|+-+- -..- +..+..++++-+.++|
T Consensus 89 GIPVLFIPGNAGSyKQv-RSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe--~tAm--~G~~l~dQtEYV~dAI 163 (973)
T KOG3724|consen 89 GIPVLFIPGNAGSYKQV-RSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEE--FTAM--HGHILLDQTEYVNDAI 163 (973)
T ss_pred CceEEEecCCCCchHHH-HHHHHHHhhhhcCCchhhhhcccCccccceEEEcccch--hhhh--ccHhHHHHHHHHHHHH
Confidence 45799999998875544 44443332 11366777776541 0000 1125666666666666
Q ss_pred HHHHhhh----ccC---CccEEEEEeChhHHHHHHHHhc---CCCcccEEEEecccc
Q 018375 106 KSVCAQE----EYT---DKARFLYGESMGGAVTLLLHKK---DPSFWNGAVLVAPMC 152 (357)
Q Consensus 106 ~~l~~~~----~~~---~~~v~lvG~S~Gg~~a~~~a~~---~p~~v~~~vl~~~~~ 152 (357)
..+.... ++. ...|+++||||||.+|..++.. .++.|.-++..+++.
T Consensus 164 k~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH 220 (973)
T KOG3724|consen 164 KYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPH 220 (973)
T ss_pred HHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcc
Confidence 6654421 222 4559999999999999877642 234466666665543
No 189
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.03 E-value=9e-05 Score=64.11 Aligned_cols=84 Identities=14% Similarity=0.214 Sum_probs=61.5
Q ss_pred cHHHHHHHHhhCCcEE-----EE-eCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHH
Q 018375 58 FMRECGTRLASAGYAV-----FG-IDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVT 131 (357)
Q Consensus 58 ~~~~~~~~l~~~G~~v-----i~-~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a 131 (357)
+|..+++.|.+.||.. .+ +|+|---. ..++....+...|+..... ..++|+|+||||||.++
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~~---------~~~~~~~~lk~~ie~~~~~---~~~kv~li~HSmGgl~~ 133 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLSPA---------ERDEYFTKLKQLIEEAYKK---NGKKVVLIAHSMGGLVA 133 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhchh---------hHHHHHHHHHHHHHHHHHh---cCCcEEEEEeCCCchHH
Confidence 4589999999888742 22 67763211 2346667777777777543 36899999999999999
Q ss_pred HHHHhcCCC------cccEEEEeccccc
Q 018375 132 LLLHKKDPS------FWNGAVLVAPMCK 153 (357)
Q Consensus 132 ~~~a~~~p~------~v~~~vl~~~~~~ 153 (357)
..+....+. .|+++|.++++..
T Consensus 134 ~~fl~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 134 RYFLQWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred HHHHHhccchhhHHhhhhEEEEeCCCCC
Confidence 998876643 4999999998754
No 190
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=98.00 E-value=0.00013 Score=57.16 Aligned_cols=104 Identities=20% Similarity=0.203 Sum_probs=64.8
Q ss_pred CCceEEEEEccC--CccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccC--
Q 018375 40 TPKAVVFLCHGY--GMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYT-- 115 (357)
Q Consensus 40 ~~~p~vv~lHG~--~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~-- 115 (357)
.++.+|=|+-|. |......|+.+.+.|+++||.|++.-|.- | .+...--.+..+.....++.+....+..
T Consensus 15 ~P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-t-----fDH~~~A~~~~~~f~~~~~~L~~~~~~~~~ 88 (250)
T PF07082_consen 15 RPKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-T-----FDHQAIAREVWERFERCLRALQKRGGLDPA 88 (250)
T ss_pred CCCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-C-----CcHHHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 456677777774 34444566999999999999999987742 1 0000011122223334444444333222
Q ss_pred CccEEEEEeChhHHHHHHHHhcCCCcccEEEEec
Q 018375 116 DKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVA 149 (357)
Q Consensus 116 ~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~ 149 (357)
.-++.-+|||+|+-+-+.+...++..-++-++++
T Consensus 89 ~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliS 122 (250)
T PF07082_consen 89 YLPVYGVGHSLGCKLHLLIGSLFDVERAGNILIS 122 (250)
T ss_pred cCCeeeeecccchHHHHHHhhhccCcccceEEEe
Confidence 2478889999999999888877665446666665
No 191
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.99 E-value=2.9e-05 Score=53.13 Aligned_cols=60 Identities=25% Similarity=0.290 Sum_probs=50.6
Q ss_pred cccEEEEeeCCCccCChHHHHHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHH
Q 018375 234 MIPFFVLHGEADTVTDPEVSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDE 299 (357)
Q Consensus 234 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~ 299 (357)
..|+|++.++.|+..|.+.++.+.+.+. +.+++.+++.||..+..... .+.+.+.+||.+
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~--~s~lvt~~g~gHg~~~~~s~----C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLP--GSRLVTVDGAGHGVYAGGSP----CVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCC--CceEEEEeccCcceecCCCh----HHHHHHHHHHHc
Confidence 5899999999999999999999999995 69999999999999852222 267777788864
No 192
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=97.93 E-value=0.00025 Score=59.49 Aligned_cols=110 Identities=15% Similarity=0.103 Sum_probs=84.4
Q ss_pred CCCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCcc--ccchhhHHHHHHHHHHHHHhhhccC
Q 018375 38 FSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCY--IKKFENIVNDCDDFFKSVCAQEEYT 115 (357)
Q Consensus 38 ~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~--~~~~~~~~~d~~~~l~~l~~~~~~~ 115 (357)
.+...|+|+..-|++.+...........|. -+-+.+++|-++.|.+.+.. ..++.+.+.|...+++.++.. =
T Consensus 59 k~~drPtV~~T~GY~~~~~p~r~Ept~Lld---~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~i---Y 132 (448)
T PF05576_consen 59 KDFDRPTVLYTEGYNVSTSPRRSEPTQLLD---GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPI---Y 132 (448)
T ss_pred cCCCCCeEEEecCcccccCccccchhHhhc---cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhh---c
Confidence 355679999999988765444344444443 46789999999999875542 247889999999999999442 2
Q ss_pred CccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccc
Q 018375 116 DKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCK 153 (357)
Q Consensus 116 ~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 153 (357)
..+.+--|.|-||+.++.+=.-+|+.|++.|....+.+
T Consensus 133 ~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~~ 170 (448)
T PF05576_consen 133 PGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPND 170 (448)
T ss_pred cCCceecCcCCCceeEEEEeeeCCCCCCeeeeeecccc
Confidence 46788999999999999998889999999998766554
No 193
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=97.91 E-value=0.00087 Score=56.45 Aligned_cols=84 Identities=18% Similarity=0.256 Sum_probs=56.4
Q ss_pred cEEEEeCCC-CCccCCCCCccc-cchhhHHHHHHHHHHHHHhh-hccCCccEEEEEeChhHHHHHHHHhc----C-----
Q 018375 71 YAVFGIDYE-GHGRSRGARCYI-KKFENIVNDCDDFFKSVCAQ-EEYTDKARFLYGESMGGAVTLLLHKK----D----- 138 (357)
Q Consensus 71 ~~vi~~d~~-G~G~s~~~~~~~-~~~~~~~~d~~~~l~~l~~~-~~~~~~~v~lvG~S~Gg~~a~~~a~~----~----- 138 (357)
.+++-+|.| |.|.|-...... .+-+..++|+..+|+....+ ..+...+++|.|-|+||..+-.+|.. .
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~ 81 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 81 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccC
Confidence 368899999 888886443221 12234557888777776543 34467899999999999966666532 1
Q ss_pred -CCcccEEEEecccccc
Q 018375 139 -PSFWNGAVLVAPMCKI 154 (357)
Q Consensus 139 -p~~v~~~vl~~~~~~~ 154 (357)
+-.++|+++-+|..+.
T Consensus 82 ~~inLkGi~IGNg~t~~ 98 (319)
T PLN02213 82 PPINLQGYMLGNPVTYM 98 (319)
T ss_pred CceeeeEEEeCCCCCCc
Confidence 1147899988887654
No 194
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=97.90 E-value=0.00065 Score=54.05 Aligned_cols=108 Identities=9% Similarity=0.084 Sum_probs=77.4
Q ss_pred CCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCcc
Q 018375 39 STPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKA 118 (357)
Q Consensus 39 ~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~ 118 (357)
..+.|.|+++-...++.....+...+.|... ..|+..|+-..-.-.-..+. ++++++++-+.+.+..+ + ..
T Consensus 100 r~pdPkvLivapmsGH~aTLLR~TV~alLp~-~~vyitDW~dAr~Vp~~~G~-FdldDYIdyvie~~~~~------G-p~ 170 (415)
T COG4553 100 RKPDPKVLIVAPMSGHYATLLRGTVEALLPY-HDVYITDWVDARMVPLEAGH-FDLDDYIDYVIEMINFL------G-PD 170 (415)
T ss_pred cCCCCeEEEEecccccHHHHHHHHHHHhccc-cceeEeeccccceeecccCC-ccHHHHHHHHHHHHHHh------C-CC
Confidence 3456788888888887666667788888876 78999998654333322332 47899999999999998 3 44
Q ss_pred EEEEEeChhHH-----HHHHHHhcCCCcccEEEEeccccccc
Q 018375 119 RFLYGESMGGA-----VTLLLHKKDPSFWNGAVLVAPMCKIS 155 (357)
Q Consensus 119 v~lvG~S~Gg~-----~a~~~a~~~p~~v~~~vl~~~~~~~~ 155 (357)
+++++.|.=+. +++..+...|.....+++++++.+..
T Consensus 171 ~hv~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDaR 212 (415)
T COG4553 171 AHVMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDAR 212 (415)
T ss_pred CcEEEEecCCchHHHHHHHHHhcCCCCCCceeeeecCccccc
Confidence 78888876544 44444556777789999999876643
No 195
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.88 E-value=0.00023 Score=55.86 Aligned_cols=102 Identities=20% Similarity=0.192 Sum_probs=67.1
Q ss_pred eEEEEEccCCccccc-cHHHHHHHHhhC-CcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEE
Q 018375 43 AVVFLCHGYGMECSG-FMRECGTRLASA-GYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARF 120 (357)
Q Consensus 43 p~vv~lHG~~~~~~~-~~~~~~~~l~~~-G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~ 120 (357)
.++|++||++..... -+..+.+.+.+. |..|+++|. |-| -.........++++.+.+.+....+ -.+-+.
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g---~~~s~l~pl~~Qv~~~ce~v~~m~~----lsqGyn 95 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDG---IKDSSLMPLWEQVDVACEKVKQMPE----LSQGYN 95 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCC---cchhhhccHHHHHHHHHHHHhcchh----ccCceE
Confidence 459999999887654 135666666655 788899885 334 1111122455666666665554422 245689
Q ss_pred EEEeChhHHHHHHHHhcCCC-cccEEEEecccc
Q 018375 121 LYGESMGGAVTLLLHKKDPS-FWNGAVLVAPMC 152 (357)
Q Consensus 121 lvG~S~Gg~~a~~~a~~~p~-~v~~~vl~~~~~ 152 (357)
++|.|.||.++-.++...++ .|+..|.++++-
T Consensus 96 ivg~SQGglv~Raliq~cd~ppV~n~ISL~gPh 128 (296)
T KOG2541|consen 96 IVGYSQGGLVARALIQFCDNPPVKNFISLGGPH 128 (296)
T ss_pred EEEEccccHHHHHHHHhCCCCCcceeEeccCCc
Confidence 99999999999888875543 488888877653
No 196
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.70 E-value=0.00048 Score=59.15 Aligned_cols=115 Identities=17% Similarity=0.229 Sum_probs=85.4
Q ss_pred CCCceEEEEEccCCccccccH----HHHHHHHhhCCcEEEEeCCCCCccCCCCCcc------ccchhhHHHHHHHHHHHH
Q 018375 39 STPKAVVFLCHGYGMECSGFM----RECGTRLASAGYAVFGIDYEGHGRSRGARCY------IKKFENIVNDCDDFFKSV 108 (357)
Q Consensus 39 ~~~~p~vv~lHG~~~~~~~~~----~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~------~~~~~~~~~d~~~~l~~l 108 (357)
....|..|+|-|=+.-...|. ..+...-.+.|-.|+.++.|-+|.|.+.... ..+..+...|+..+|+.+
T Consensus 83 ~~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~ 162 (514)
T KOG2182|consen 83 KPGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAM 162 (514)
T ss_pred cCCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHH
Confidence 456788888888544332220 1233333445889999999999988653321 236678889999999999
Q ss_pred HhhhccCCc-cEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccc
Q 018375 109 CAQEEYTDK-ARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCK 153 (357)
Q Consensus 109 ~~~~~~~~~-~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 153 (357)
..+.+.... +.+.+|-|+-|.++..+=.++|+.+.+.|.-+++..
T Consensus 163 n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~ 208 (514)
T KOG2182|consen 163 NAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVL 208 (514)
T ss_pred HhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeeccccccee
Confidence 877766554 999999999999999999999999999888877653
No 197
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=97.68 E-value=0.00015 Score=44.05 Aligned_cols=46 Identities=22% Similarity=0.197 Sum_probs=27.6
Q ss_pred CccceeeeeEEecCCcEEEEEEEcCC------CCCceEEEEEccCCcccccc
Q 018375 13 TVVEYQEEYIRNARGVQLFTCRWLPF------STPKAVVFLCHGYGMECSGF 58 (357)
Q Consensus 13 ~~~~~~~~~~~~~~g~~l~~~~~~p~------~~~~p~vv~lHG~~~~~~~~ 58 (357)
.++..|+..+.+.||.-|......+. ..++|+|++.||+.+++..|
T Consensus 8 ~GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 8 HGYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp TT---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGG
T ss_pred cCCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHH
Confidence 36778999999999998877655432 24688999999999988877
No 198
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.66 E-value=0.0024 Score=50.80 Aligned_cols=41 Identities=20% Similarity=0.295 Sum_probs=36.4
Q ss_pred ccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccc
Q 018375 113 EYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCK 153 (357)
Q Consensus 113 ~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 153 (357)
..+.++..|+|||+||.+++.....+|+.+...++++|...
T Consensus 133 ~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlW 173 (264)
T COG2819 133 RTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLW 173 (264)
T ss_pred ccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchhh
Confidence 33567799999999999999999999999999999999753
No 199
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.56 E-value=0.0016 Score=51.49 Aligned_cols=37 Identities=11% Similarity=0.029 Sum_probs=30.0
Q ss_pred CccEEEEEeChhHHHHHHHHhcC----CCcccEEEEecccc
Q 018375 116 DKARFLYGESMGGAVTLLLHKKD----PSFWNGAVLVAPMC 152 (357)
Q Consensus 116 ~~~v~lvG~S~Gg~~a~~~a~~~----p~~v~~~vl~~~~~ 152 (357)
..++.+.|||.||.+|..++... .++|..++..+++.
T Consensus 83 ~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 83 PGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred CCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCC
Confidence 34699999999999999999763 35788888887754
No 200
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.50 E-value=0.0071 Score=45.62 Aligned_cols=113 Identities=19% Similarity=0.147 Sum_probs=68.4
Q ss_pred CCCceEEEEEccCCccccccHHH-------HHHHHh------hCCcEEEEeCCCCCccCCC-CCc--cccchhhHHHHHH
Q 018375 39 STPKAVVFLCHGYGMECSGFMRE-------CGTRLA------SAGYAVFGIDYEGHGRSRG-ARC--YIKKFENIVNDCD 102 (357)
Q Consensus 39 ~~~~p~vv~lHG~~~~~~~~~~~-------~~~~l~------~~G~~vi~~d~~G~G~s~~-~~~--~~~~~~~~~~d~~ 102 (357)
+....+.++++|.+.+....... +.+.+. ..+-.|-++-+-||-.-.. ... ....-+.-+.++.
T Consensus 16 d~A~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~A~~ga~~L~ 95 (177)
T PF06259_consen 16 DTADHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGYARAGAPRLA 95 (177)
T ss_pred CCcCeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchHHHHHHHHHH
Confidence 44567899999987764432211 111111 1122444444444422210 000 0012345567888
Q ss_pred HHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEecccc
Q 018375 103 DFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMC 152 (357)
Q Consensus 103 ~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 152 (357)
.+++.|.... .+..++.++|||+|+.++-..+...+..++.+|+++++.
T Consensus 96 ~f~~gl~a~~-~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG 144 (177)
T PF06259_consen 96 RFLDGLRATH-GPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPG 144 (177)
T ss_pred HHHHHhhhhc-CCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCC
Confidence 8888886544 356789999999999999888877667799999988654
No 201
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.44 E-value=0.00039 Score=51.76 Aligned_cols=57 Identities=25% Similarity=0.193 Sum_probs=38.9
Q ss_pred hhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCC----cccEEEEecccc
Q 018375 94 FENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPS----FWNGAVLVAPMC 152 (357)
Q Consensus 94 ~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~----~v~~~vl~~~~~ 152 (357)
+......+...++..... .+..+++++|||+||.+|..++..... .+..++.++++.
T Consensus 7 ~~~~~~~i~~~~~~~~~~--~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 7 ARSLANLVLPLLKSALAQ--YPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHHHHHH--CCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 344445555555554321 357899999999999999999876543 466677777654
No 202
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.27 E-value=0.00073 Score=59.80 Aligned_cols=90 Identities=12% Similarity=-0.001 Sum_probs=59.8
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCccCCCCCcc-ccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhc
Q 018375 59 MRECGTRLASAGYAVFGIDYEGHGRSRGARCY-IKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKK 137 (357)
Q Consensus 59 ~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~-~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~ 137 (357)
|..+++.|+..||. -.++.|.....+.... ...-+++...+...|+.+.... +.++|+|+||||||.+++.+...
T Consensus 158 w~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~n--ggkKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 158 WAVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATN--GGKKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred HHHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHc--CCCeEEEEEeCCchHHHHHHHHh
Confidence 48999999999986 3555544333322211 1123556667777777764432 36899999999999999987653
Q ss_pred CC---------------CcccEEEEecccc
Q 018375 138 DP---------------SFWNGAVLVAPMC 152 (357)
Q Consensus 138 ~p---------------~~v~~~vl~~~~~ 152 (357)
-. ..|++.|.++++.
T Consensus 234 v~~~~~~gG~gG~~W~dKyI~s~I~Iagp~ 263 (642)
T PLN02517 234 VEAPAPMGGGGGPGWCAKHIKAVMNIGGPF 263 (642)
T ss_pred ccccccccCCcchHHHHHHHHHheeccccc
Confidence 21 1388899988764
No 203
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.07 E-value=0.0059 Score=48.92 Aligned_cols=58 Identities=26% Similarity=0.254 Sum_probs=36.8
Q ss_pred chhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcC-----CCcccEEEEecccc
Q 018375 93 KFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKD-----PSFWNGAVLVAPMC 152 (357)
Q Consensus 93 ~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~-----p~~v~~~vl~~~~~ 152 (357)
.+.....++...+..+.++ .+..++++.|||+||.+|..++... +..+..+..-+|..
T Consensus 106 ~~~~~~~~~~~~~~~~~~~--~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~v 168 (229)
T cd00519 106 AYKSLYNQVLPELKSALKQ--YPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRV 168 (229)
T ss_pred HHHHHHHHHHHHHHHHHhh--CCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCC
Confidence 3445555555655555332 3567899999999999999887642 23355555444443
No 204
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=97.05 E-value=0.066 Score=46.77 Aligned_cols=115 Identities=23% Similarity=0.181 Sum_probs=71.3
Q ss_pred CCceEEEEEccCCccccccHHHHHH-------------------HHhhCCcEEEEeCC-CCCccCCC-CCccccchhhHH
Q 018375 40 TPKAVVFLCHGYGMECSGFMRECGT-------------------RLASAGYAVFGIDY-EGHGRSRG-ARCYIKKFENIV 98 (357)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~-------------------~l~~~G~~vi~~d~-~G~G~s~~-~~~~~~~~~~~~ 98 (357)
.+.|.++++.|.++.+..+ -.+.+ .+.+. -.++-+|+ -|.|.|.. ......++....
T Consensus 99 ~~rPvi~wlNGGPGcSS~~-g~l~elGP~rI~~~~~P~~~~NP~SW~~~-adLvFiDqPvGTGfS~a~~~e~~~d~~~~~ 176 (498)
T COG2939 99 ANRPVIFWLNGGPGCSSVT-GLLGELGPKRIQSGTSPSYPDNPGSWLDF-ADLVFIDQPVGTGFSRALGDEKKKDFEGAG 176 (498)
T ss_pred CCCceEEEecCCCChHhhh-hhhhhcCCeeeeCCCCCCCCCCccccccC-CceEEEecCcccCcccccccccccchhccc
Confidence 3589999999999886655 22211 01111 36888894 48888874 222223556666
Q ss_pred HHHHHHHHHHHhhh---ccCCccEEEEEeChhHHHHHHHHhcCCC---cccEEEEecccccccc
Q 018375 99 NDCDDFFKSVCAQE---EYTDKARFLYGESMGGAVTLLLHKKDPS---FWNGAVLVAPMCKISE 156 (357)
Q Consensus 99 ~d~~~~l~~l~~~~---~~~~~~v~lvG~S~Gg~~a~~~a~~~p~---~v~~~vl~~~~~~~~~ 156 (357)
+|+..+++.+.+.. .-...+.+|+|-|+||.-+..+|...-+ ..++++++.+......
T Consensus 177 ~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvligng 240 (498)
T COG2939 177 KDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIGNG 240 (498)
T ss_pred hhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeeecCC
Confidence 67776666654421 1124589999999999987777753322 3566777666554433
No 205
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=97.04 E-value=0.0033 Score=47.95 Aligned_cols=105 Identities=17% Similarity=0.111 Sum_probs=58.7
Q ss_pred EEEEEccCCcccc--ccHHHHHHHHhh----CCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCc
Q 018375 44 VVFLCHGYGMECS--GFMRECGTRLAS----AGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDK 117 (357)
Q Consensus 44 ~vv~lHG~~~~~~--~~~~~~~~~l~~----~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~ 117 (357)
.||+..|.+.... ..-..+.+.+.+ ....+..++||-..... .+..+...-+.++...|+....+. +..
T Consensus 7 ~vi~aRGT~E~~g~~~~g~~~~~~l~~~~g~~~~~~~~V~YpA~~~~~---~y~~S~~~G~~~~~~~i~~~~~~C--P~~ 81 (179)
T PF01083_consen 7 HVIFARGTGEPPGVGRVGPPFADALQAQPGGTSVAVQGVEYPASLGPN---SYGDSVAAGVANLVRLIEEYAARC--PNT 81 (179)
T ss_dssp EEEEE--TTSSTTTCCCHHHHHHHHHHHCTTCEEEEEE--S---SCGG---SCHHHHHHHHHHHHHHHHHHHHHS--TTS
T ss_pred EEEEecCCCCCCCCccccHHHHHHHHhhcCCCeeEEEecCCCCCCCcc---cccccHHHHHHHHHHHHHHHHHhC--CCC
Confidence 4666666554322 111233334432 22556667777432221 222355566667777777664443 577
Q ss_pred cEEEEEeChhHHHHHHHHhc--C----CCcccEEEEeccccc
Q 018375 118 ARFLYGESMGGAVTLLLHKK--D----PSFWNGAVLVAPMCK 153 (357)
Q Consensus 118 ~v~lvG~S~Gg~~a~~~a~~--~----p~~v~~~vl~~~~~~ 153 (357)
+++|+|+|.|+.++..++.. . .++|.++++++-+..
T Consensus 82 kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~ 123 (179)
T PF01083_consen 82 KIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRR 123 (179)
T ss_dssp EEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTT
T ss_pred CEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcc
Confidence 99999999999999999876 2 246899999876543
No 206
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=96.95 E-value=0.0064 Score=55.76 Aligned_cols=119 Identities=20% Similarity=0.185 Sum_probs=70.9
Q ss_pred EEEEEEEcCCCCC---ceEEEEEccCCccccc---c-HHHHHHHHhhCCcEEEEeCCC----CCccCCC--CCccccchh
Q 018375 29 QLFTCRWLPFSTP---KAVVFLCHGYGMECSG---F-MRECGTRLASAGYAVFGIDYE----GHGRSRG--ARCYIKKFE 95 (357)
Q Consensus 29 ~l~~~~~~p~~~~---~p~vv~lHG~~~~~~~---~-~~~~~~~l~~~G~~vi~~d~~----G~G~s~~--~~~~~~~~~ 95 (357)
-|+.-+|.|.... .|++|++||.+..... + .......+..+...|+.+.+| |+..... .++. ..
T Consensus 96 CLylNV~tp~~~~~~~~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN-~g-- 172 (545)
T KOG1516|consen 96 CLYLNVYTPQGCSESKLPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGN-LG-- 172 (545)
T ss_pred CceEEEeccCCCccCCCCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCc-cc--
Confidence 4666777774333 6999999997543222 1 112223344446888999998 3322211 1111 12
Q ss_pred hHHHHHHHHHHHHHhh---hccCCccEEEEEeChhHHHHHHHHhc--CCCcccEEEEecccc
Q 018375 96 NIVNDCDDFFKSVCAQ---EEYTDKARFLYGESMGGAVTLLLHKK--DPSFWNGAVLVAPMC 152 (357)
Q Consensus 96 ~~~~d~~~~l~~l~~~---~~~~~~~v~lvG~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~ 152 (357)
..|...+++++... .+.+.++|.|+|||.||..+..+... ....+.++|.+++..
T Consensus 173 --l~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~ 232 (545)
T KOG1516|consen 173 --LFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNA 232 (545)
T ss_pred --HHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccc
Confidence 22666777776543 34478899999999999988777632 124566666666543
No 207
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.93 E-value=0.048 Score=45.83 Aligned_cols=244 Identities=10% Similarity=-0.012 Sum_probs=118.6
Q ss_pred CceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEE
Q 018375 41 PKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARF 120 (357)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~ 120 (357)
...+||++=||.+....+...+.....+.||.++.+-.|-+-..........+..... ..+..+......+..+++
T Consensus 37 s~k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~sl~~~~----~~l~~L~~~~~~~~~pi~ 112 (350)
T KOG2521|consen 37 SEKPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRILSLSLAS----TRLSELLSDYNSDPCPII 112 (350)
T ss_pred ccccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcccccccccccccchhhHHH----HHHHHHhhhccCCcCceE
Confidence 3434666667766656676788888888899999998886543322221111222222 333333332234567888
Q ss_pred EEEeChhHHHHHHHH---h-cC-C---CcccEEEEecccccccccc--CChhHHHHHHHHHHhhcccCcccCccccchhh
Q 018375 121 LYGESMGGAVTLLLH---K-KD-P---SFWNGAVLVAPMCKISEKV--KPHPVLVNILTRVEEIIPKWKIVPTKDVIDSA 190 (357)
Q Consensus 121 lvG~S~Gg~~a~~~a---~-~~-p---~~v~~~vl~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (357)
+--.|+||...+... . +. | +...+++..+.+....... .+.............+........ .+....
T Consensus 113 fh~FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~i~--~~~~~~ 190 (350)
T KOG2521|consen 113 FHVFSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSSPVQLGWAVSFSSPPDDYVARWARLNYHIT--LLTMAG 190 (350)
T ss_pred EEEecCCceeehHHHHHHHhhcCchhHhhcCCceEeccccccchhhhcceeccccCchhhHHHHHhcCeEEE--EEEeee
Confidence 889999998654433 1 12 2 2355566655544322111 000000000000000000000000 000000
Q ss_pred c--cChhHHHHHhhcccccCCccchHHHHHHHHhhhhHhhccCCccccEEEEeeCCCccCChHHHHHHHHHccC--CCce
Q 018375 191 F--KDSIKREEIRNNKLIYQDKPRLKTALEMLRTSMSLEDSLSKVMIPFFVLHGEADTVTDPEVSKALYERASS--RDKT 266 (357)
Q Consensus 191 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~--~~~~ 266 (357)
. ............. +... ...+ ......-.....+.+.+++..|.++|....+++.+.... .+++
T Consensus 191 ~~~~~~~~~~~~~~~~--~~r~---~~~~------~r~~~~~~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~ 259 (350)
T KOG2521|consen 191 NEGGAYLLGPLAEKIS--MSRK---YHFL------DRYEEQRNELPWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVK 259 (350)
T ss_pred cccchhhhhhhhhccc--cccc---hHHH------HHHHhhhhcccccceeecCCccccccHHHHHHHHHHHHhcCceEE
Confidence 0 0000000000000 0000 0000 011111222246788899999999999988888555433 3556
Q ss_pred EEEcCCCCccccc-CCCChhhhhHHHHHHHHHHHhccccc
Q 018375 267 IKLYPGMWHALTS-GEPDENIDIVFGDIIAWLDERMSDAN 305 (357)
Q Consensus 267 ~~~~~~~gH~~~~-~~p~~~~~~~~~~i~~fl~~~~~~~~ 305 (357)
.+-+.++-|..++ ..|.. +.+...+|++.......
T Consensus 260 s~~~~ds~H~~h~r~~p~~----y~~~~~~Fl~~~~~~~~ 295 (350)
T KOG2521|consen 260 SVKFKDSEHVAHFRSFPKT----YLKKCSEFLRSVISSYN 295 (350)
T ss_pred EeeccCccceeeeccCcHH----HHHHHHHHHHhcccccC
Confidence 6666777887654 34555 88999999988766543
No 208
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.88 E-value=0.0022 Score=46.89 Aligned_cols=39 Identities=23% Similarity=0.348 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhc
Q 018375 97 IVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKK 137 (357)
Q Consensus 97 ~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~ 137 (357)
..+.+.+.++.+..+. +..++++.|||+||.+|..++..
T Consensus 46 ~~~~~~~~l~~~~~~~--~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 46 LYDQILDALKELVEKY--PDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHHHS--TTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcc--cCccchhhccchHHHHHHHHHHh
Confidence 3344555555543322 35789999999999999888854
No 209
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=96.68 E-value=0.0061 Score=42.07 Aligned_cols=39 Identities=13% Similarity=0.190 Sum_probs=24.9
Q ss_pred eeEEecCCcEEEEEEEcCCCCCceEEEEEccCCcccccc
Q 018375 20 EYIRNARGVQLFTCRWLPFSTPKAVVFLCHGYGMECSGF 58 (357)
Q Consensus 20 ~~~~~~~g~~l~~~~~~p~~~~~p~vv~lHG~~~~~~~~ 58 (357)
.+.+..+|..|++....+.+....+|||+|||+++--.|
T Consensus 70 hf~t~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf~Ef 108 (112)
T PF06441_consen 70 HFKTEIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSFLEF 108 (112)
T ss_dssp EEEEEETTEEEEEEEE--S-TT-EEEEEE--SS--GGGG
T ss_pred CeeEEEeeEEEEEEEeeCCCCCCeEEEEECCCCccHHhH
Confidence 455667899999998887666777899999999986555
No 210
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=96.51 E-value=0.0055 Score=52.63 Aligned_cols=86 Identities=16% Similarity=0.183 Sum_probs=57.1
Q ss_pred cHHHHHHHHhhCCcE------EEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHH
Q 018375 58 FMRECGTRLASAGYA------VFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVT 131 (357)
Q Consensus 58 ~~~~~~~~l~~~G~~------vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a 131 (357)
+|..+++.|..-||. -..+|+|-.-.. . ...+++...+...|+...... +.+||+|++|||||.+.
T Consensus 125 ~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~~---~---e~rd~yl~kLK~~iE~~~~~~--G~kkVvlisHSMG~l~~ 196 (473)
T KOG2369|consen 125 YWHELIENLVGIGYERGKTLFGAPYDWRLSYHN---S---EERDQYLSKLKKKIETMYKLN--GGKKVVLISHSMGGLYV 196 (473)
T ss_pred HHHHHHHHHHhhCcccCceeeccccchhhccCC---h---hHHHHHHHHHHHHHHHHHHHc--CCCceEEEecCCccHHH
Confidence 457888889888886 355676631111 1 134555566666666653322 45999999999999999
Q ss_pred HHHHhcCCC--------cccEEEEeccc
Q 018375 132 LLLHKKDPS--------FWNGAVLVAPM 151 (357)
Q Consensus 132 ~~~a~~~p~--------~v~~~vl~~~~ 151 (357)
+.+....++ .|++.+-+++.
T Consensus 197 lyFl~w~~~~~~~W~~k~I~sfvnig~p 224 (473)
T KOG2369|consen 197 LYFLKWVEAEGPAWCDKYIKSFVNIGAP 224 (473)
T ss_pred HHHHhcccccchhHHHHHHHHHHccCch
Confidence 999987766 25666666543
No 211
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=96.39 E-value=0.042 Score=48.57 Aligned_cols=103 Identities=18% Similarity=0.298 Sum_probs=61.9
Q ss_pred CCceEEEEEccCCcc------ccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHh---
Q 018375 40 TPKAVVFLCHGYGME------CSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCA--- 110 (357)
Q Consensus 40 ~~~p~vv~lHG~~~~------~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~--- 110 (357)
.++-.|+-+||.|.- .+.|.+.+++.| |..|+.+||.-..+.. +..-.+++.-+.-|+..
T Consensus 394 ~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL---~cPiiSVdYSLAPEaP--------FPRaleEv~fAYcW~inn~a 462 (880)
T KOG4388|consen 394 RSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQAL---GCPIISVDYSLAPEAP--------FPRALEEVFFAYCWAINNCA 462 (880)
T ss_pred CCceEEEEecCCceeeeccccccHHHHHHHHHh---CCCeEEeeeccCCCCC--------CCcHHHHHHHHHHHHhcCHH
Confidence 345678889997642 223444444444 7899999986544332 22233444444444433
Q ss_pred hhccCCccEEEEEeChhHHHHHHHH----hcCCCcccEEEEeccccc
Q 018375 111 QEEYTDKARFLYGESMGGAVTLLLH----KKDPSFWNGAVLVAPMCK 153 (357)
Q Consensus 111 ~~~~~~~~v~lvG~S~Gg~~a~~~a----~~~p~~v~~~vl~~~~~~ 153 (357)
..+.-.++|+++|-|.||.+.+..+ +..=...+++++.-++.-
T Consensus 463 llG~TgEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~ptl 509 (880)
T KOG4388|consen 463 LLGSTGERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPTL 509 (880)
T ss_pred HhCcccceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecChhh
Confidence 2344578999999999999654444 322223578888776543
No 212
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=96.32 E-value=0.082 Score=47.18 Aligned_cols=128 Identities=22% Similarity=0.279 Sum_probs=76.2
Q ss_pred ecCCc--EEEEEEEcCCCCCceEEEEEccCCccccccHHH----HHHHHhhCCcEEEEeCCCCCccCCC--CCccccchh
Q 018375 24 NARGV--QLFTCRWLPFSTPKAVVFLCHGYGMECSGFMRE----CGTRLASAGYAVFGIDYEGHGRSRG--ARCYIKKFE 95 (357)
Q Consensus 24 ~~~g~--~l~~~~~~p~~~~~p~vv~lHG~~~~~~~~~~~----~~~~l~~~G~~vi~~d~~G~G~s~~--~~~~~~~~~ 95 (357)
..++. .|.+.+|+|..=... ++.+-|.|......... +...+ .+||.++.-|- ||..+.. ......+.+
T Consensus 9 ~~~~~~~~i~fev~LP~~WNgR-~~~~GgGG~~G~i~~~~~~~~~~~~~-~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~ 85 (474)
T PF07519_consen 9 PSDGSAPNIRFEVWLPDNWNGR-FLQVGGGGFAGGINYADGKASMATAL-ARGYATASTDS-GHQGSAGSDDASFGNNPE 85 (474)
T ss_pred cCCCCcceEEEEEECChhhccC-eEEECCCeeeCcccccccccccchhh-hcCeEEEEecC-CCCCCcccccccccCCHH
Confidence 34444 899999999532222 55655544443322122 33333 57999999995 5654432 111111221
Q ss_pred hHH-------HHHHHHHHHHHh-hhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEecccccc
Q 018375 96 NIV-------NDCDDFFKSVCA-QEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKI 154 (357)
Q Consensus 96 ~~~-------~d~~~~l~~l~~-~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 154 (357)
.+. .+...+-+.+.+ -.+.....-...|.|-||..++..|.++|+.+++++.-+|....
T Consensus 86 ~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~~ 152 (474)
T PF07519_consen 86 ALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAINW 152 (474)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHHH
Confidence 111 122222222221 12235677889999999999999999999999999999997654
No 213
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=96.27 E-value=0.0088 Score=45.10 Aligned_cols=66 Identities=17% Similarity=0.254 Sum_probs=52.0
Q ss_pred cccEEEEeeCCCccCChHHHHHHHHHccC---CCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHHh
Q 018375 234 MIPFFVLHGEADTVTDPEVSKALYERASS---RDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDER 300 (357)
Q Consensus 234 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~ 300 (357)
++++|-|-|+.|.++...+.......+.+ .....++.+|+||+-.+..+. ..+++...|.+|+.++
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~r-wr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSR-WREEIYPRIREFIRQH 202 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchh-hhhhhhHHHHHHHHhC
Confidence 56788899999999998877776666554 446777889999998876554 5677999999999764
No 214
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.24 E-value=0.065 Score=38.93 Aligned_cols=80 Identities=16% Similarity=0.142 Sum_probs=50.8
Q ss_pred CceEEEEEccCCccccccHHHHHHHHhhCCc-EEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccE
Q 018375 41 PKAVVFLCHGYGMECSGFMRECGTRLASAGY-AVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKAR 119 (357)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~-~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v 119 (357)
+...||++-||+..++.. ..+ ....++ -++++||..... ++ |.. ..+.+
T Consensus 10 gd~LIvyFaGwgtpps~v-~HL---ilpeN~dl~lcYDY~dl~l---------df-----Dfs------------Ay~hi 59 (214)
T COG2830 10 GDHLIVYFAGWGTPPSAV-NHL---ILPENHDLLLCYDYQDLNL---------DF-----DFS------------AYRHI 59 (214)
T ss_pred CCEEEEEEecCCCCHHHH-hhc---cCCCCCcEEEEeehhhcCc---------cc-----chh------------hhhhh
Confidence 344789999998875544 332 223345 457888875421 11 111 13557
Q ss_pred EEEEeChhHHHHHHHHhcCCCcccEEEEecccc
Q 018375 120 FLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMC 152 (357)
Q Consensus 120 ~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 152 (357)
-+|++|||-.+|-++....+ ++..+.+++..
T Consensus 60 rlvAwSMGVwvAeR~lqg~~--lksatAiNGTg 90 (214)
T COG2830 60 RLVAWSMGVWVAERVLQGIR--LKSATAINGTG 90 (214)
T ss_pred hhhhhhHHHHHHHHHHhhcc--ccceeeecCCC
Confidence 89999999999999987765 56666666543
No 215
>PLN02162 triacylglycerol lipase
Probab=96.15 E-value=0.016 Score=50.22 Aligned_cols=22 Identities=32% Similarity=0.522 Sum_probs=19.2
Q ss_pred CCccEEEEEeChhHHHHHHHHh
Q 018375 115 TDKARFLYGESMGGAVTLLLHK 136 (357)
Q Consensus 115 ~~~~v~lvG~S~Gg~~a~~~a~ 136 (357)
+..++++.|||+||.+|..+|.
T Consensus 276 p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 276 KNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred CCceEEEEecChHHHHHHHHHH
Confidence 5678999999999999988764
No 216
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.11 E-value=0.012 Score=45.41 Aligned_cols=75 Identities=20% Similarity=0.157 Sum_probs=46.7
Q ss_pred HHHHHhhCCcEEEEeCCCCCccCCCC----CccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhc
Q 018375 62 CGTRLASAGYAVFGIDYEGHGRSRGA----RCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKK 137 (357)
Q Consensus 62 ~~~~l~~~G~~vi~~d~~G~G~s~~~----~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~ 137 (357)
.+..|... .+|+++=||=....... .....-.+--..|+.++.++..++.+ +.++++|+|||.|+.+..++...
T Consensus 38 qas~F~~~-~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n-~GRPfILaGHSQGs~~l~~LL~e 115 (207)
T PF11288_consen 38 QASAFNGV-CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYN-NGRPFILAGHSQGSMHLLRLLKE 115 (207)
T ss_pred HhhhhhcC-CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcC-CCCCEEEEEeChHHHHHHHHHHH
Confidence 34455444 67888888733211111 00101223334688888877765544 56899999999999999999865
Q ss_pred C
Q 018375 138 D 138 (357)
Q Consensus 138 ~ 138 (357)
+
T Consensus 116 ~ 116 (207)
T PF11288_consen 116 E 116 (207)
T ss_pred H
Confidence 3
No 217
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=96.06 E-value=0.93 Score=39.82 Aligned_cols=123 Identities=13% Similarity=0.107 Sum_probs=77.0
Q ss_pred eEEecCCcEEEEEEEcCCCCCceEEEEEccCCccccccHHHHHHHHhhCCcEE-EEeCCCCCccCCCCCccccchhhHHH
Q 018375 21 YIRNARGVQLFTCRWLPFSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAV-FGIDYEGHGRSRGARCYIKKFENIVN 99 (357)
Q Consensus 21 ~~~~~~g~~l~~~~~~p~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~v-i~~d~~G~G~s~~~~~~~~~~~~~~~ 99 (357)
.+.++.+..+.|+ +-|++-+.|..|++-|+-.. ..| +.+ --+...|... +.-|.|=-|.+--. .-+++-+
T Consensus 269 r~~D~~reEi~yY-FnPGD~KPPL~VYFSGyR~a-EGF-Egy-~MMk~Lg~PfLL~~DpRleGGaFYl-----Gs~eyE~ 339 (511)
T TIGR03712 269 RLVDSKRQEFIYY-FNPGDFKPPLNVYFSGYRPA-EGF-EGY-FMMKRLGAPFLLIGDPRLEGGAFYL-----GSDEYEQ 339 (511)
T ss_pred eEecCCCCeeEEe-cCCcCCCCCeEEeeccCccc-Ccc-hhH-HHHHhcCCCeEEeeccccccceeee-----CcHHHHH
Confidence 4455566677665 45777778899999998652 333 221 1122234443 44577655544221 2233444
Q ss_pred HHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEecccccc
Q 018375 100 DCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCKI 154 (357)
Q Consensus 100 d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 154 (357)
-+.++|+...+..++....++|-|-|||.+-|+.+++... ..++|+--|....
T Consensus 340 ~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKPL~NL 392 (511)
T TIGR03712 340 GIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKPLVNL 392 (511)
T ss_pred HHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCC--CceEEEcCcccch
Confidence 5555555555555778889999999999999999998754 4677776665543
No 218
>PLN00413 triacylglycerol lipase
Probab=95.99 E-value=0.02 Score=49.76 Aligned_cols=22 Identities=32% Similarity=0.573 Sum_probs=19.6
Q ss_pred CCccEEEEEeChhHHHHHHHHh
Q 018375 115 TDKARFLYGESMGGAVTLLLHK 136 (357)
Q Consensus 115 ~~~~v~lvG~S~Gg~~a~~~a~ 136 (357)
+..++++.|||+||.+|..+|.
T Consensus 282 p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 282 PTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred CCCeEEEEecCHHHHHHHHHHH
Confidence 5678999999999999998874
No 219
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=95.74 E-value=0.056 Score=45.01 Aligned_cols=64 Identities=14% Similarity=0.334 Sum_probs=50.3
Q ss_pred cCCccccEEEEeeCCCccCChHHHHHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHHhc
Q 018375 230 LSKVMIPFFVLHGEADTVTDPEVSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDERM 301 (357)
Q Consensus 230 ~~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~ 301 (357)
..++.+|-.++.+..|.+..+..+...+..+++ ...+..+|+..|... +.. +.+.+..|+....
T Consensus 325 ~~RLalpKyivnaSgDdff~pDsa~lYyd~LPG-~kaLrmvPN~~H~~~---n~~----i~esl~~flnrfq 388 (507)
T COG4287 325 QLRLALPKYIVNASGDDFFVPDSANLYYDDLPG-EKALRMVPNDPHNLI---NQF----IKESLEPFLNRFQ 388 (507)
T ss_pred hhhccccceeecccCCcccCCCccceeeccCCC-ceeeeeCCCCcchhh---HHH----HHHHHHHHHHHHh
Confidence 466789999999999999999999999999985 778899999999875 222 4555666665543
No 220
>PLN02454 triacylglycerol lipase
Probab=95.65 E-value=0.025 Score=48.48 Aligned_cols=40 Identities=18% Similarity=0.183 Sum_probs=27.9
Q ss_pred hHHHHHHHHHHHHHhhhccCCc--cEEEEEeChhHHHHHHHHhc
Q 018375 96 NIVNDCDDFFKSVCAQEEYTDK--ARFLYGESMGGAVTLLLHKK 137 (357)
Q Consensus 96 ~~~~d~~~~l~~l~~~~~~~~~--~v~lvG~S~Gg~~a~~~a~~ 137 (357)
...+++...|+.+.++. +.. +|++.|||+||.+|+.+|..
T Consensus 207 S~r~qvl~~V~~l~~~Y--p~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 207 SARSQLLAKIKELLERY--KDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHHHHhC--CCCCceEEEEecCHHHHHHHHHHHH
Confidence 34556666666664432 233 49999999999999999843
No 221
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=95.43 E-value=0.13 Score=42.05 Aligned_cols=134 Identities=16% Similarity=0.235 Sum_probs=87.2
Q ss_pred EEecCCcEEEEEEEcC---CCCCceEEEEEccCCccccccH---HHHHH----------HHhhCCcEEEEeCCC-CCccC
Q 018375 22 IRNARGVQLFTCRWLP---FSTPKAVVFLCHGYGMECSGFM---RECGT----------RLASAGYAVFGIDYE-GHGRS 84 (357)
Q Consensus 22 ~~~~~g~~l~~~~~~p---~~~~~p~vv~lHG~~~~~~~~~---~~~~~----------~l~~~G~~vi~~d~~-G~G~s 84 (357)
+...++...++.+|.. .....|..+.+.|.++.+..-+ +.+.+ .+.+. ..++.+|-| |.|.|
T Consensus 8 v~vr~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~-adllfvDnPVGaGfS 86 (414)
T KOG1283|consen 8 VDVRTGAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKD-ADLLFVDNPVGAGFS 86 (414)
T ss_pred eeeecCceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhh-ccEEEecCCCcCcee
Confidence 3344677777777664 2245788899999866544221 22211 11122 567778877 67766
Q ss_pred C--CCCccccchhhHHHHHHHHHHHHHh-hhccCCccEEEEEeChhHHHHHHHHhcCC---------CcccEEEEecccc
Q 018375 85 R--GARCYIKKFENIVNDCDDFFKSVCA-QEEYTDKARFLYGESMGGAVTLLLHKKDP---------SFWNGAVLVAPMC 152 (357)
Q Consensus 85 ~--~~~~~~~~~~~~~~d~~~~l~~l~~-~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p---------~~v~~~vl~~~~~ 152 (357)
- +...+..+..+.+.|+.++++.+.. +..+...+++|+.-|+||-+|..++...- ..+.+++|-+++.
T Consensus 87 yVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWI 166 (414)
T KOG1283|consen 87 YVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWI 166 (414)
T ss_pred eecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCccc
Confidence 4 3333445678889999999998765 34456789999999999999988875321 2367788877766
Q ss_pred cccc
Q 018375 153 KISE 156 (357)
Q Consensus 153 ~~~~ 156 (357)
.+.+
T Consensus 167 SP~D 170 (414)
T KOG1283|consen 167 SPED 170 (414)
T ss_pred ChhH
Confidence 5443
No 222
>PLN02310 triacylglycerol lipase
Probab=95.28 E-value=0.061 Score=46.16 Aligned_cols=21 Identities=33% Similarity=0.472 Sum_probs=18.3
Q ss_pred CccEEEEEeChhHHHHHHHHh
Q 018375 116 DKARFLYGESMGGAVTLLLHK 136 (357)
Q Consensus 116 ~~~v~lvG~S~Gg~~a~~~a~ 136 (357)
..+|++.|||+||.+|+..|.
T Consensus 208 ~~sI~vTGHSLGGALAtLaA~ 228 (405)
T PLN02310 208 EVSLTVTGHSLGGALALLNAY 228 (405)
T ss_pred cceEEEEcccHHHHHHHHHHH
Confidence 357999999999999998884
No 223
>PLN02571 triacylglycerol lipase
Probab=95.27 E-value=0.039 Score=47.42 Aligned_cols=20 Identities=25% Similarity=0.341 Sum_probs=17.9
Q ss_pred cEEEEEeChhHHHHHHHHhc
Q 018375 118 ARFLYGESMGGAVTLLLHKK 137 (357)
Q Consensus 118 ~v~lvG~S~Gg~~a~~~a~~ 137 (357)
++++.|||+||.+|+..|..
T Consensus 227 sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 227 SITICGHSLGAALATLNAVD 246 (413)
T ss_pred cEEEeccchHHHHHHHHHHH
Confidence 68999999999999998853
No 224
>PLN02408 phospholipase A1
Probab=95.12 E-value=0.045 Score=46.34 Aligned_cols=21 Identities=24% Similarity=0.294 Sum_probs=18.2
Q ss_pred ccEEEEEeChhHHHHHHHHhc
Q 018375 117 KARFLYGESMGGAVTLLLHKK 137 (357)
Q Consensus 117 ~~v~lvG~S~Gg~~a~~~a~~ 137 (357)
.+|++.|||+||.+|..+|..
T Consensus 200 ~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 200 LSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred ceEEEeccchHHHHHHHHHHH
Confidence 359999999999999988854
No 225
>PLN02934 triacylglycerol lipase
Probab=95.08 E-value=0.035 Score=48.74 Aligned_cols=22 Identities=27% Similarity=0.548 Sum_probs=19.6
Q ss_pred CCccEEEEEeChhHHHHHHHHh
Q 018375 115 TDKARFLYGESMGGAVTLLLHK 136 (357)
Q Consensus 115 ~~~~v~lvG~S~Gg~~a~~~a~ 136 (357)
+..++++.|||+||.+|..++.
T Consensus 319 p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 319 KNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred CCCeEEEeccccHHHHHHHHHH
Confidence 5678999999999999998874
No 226
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=94.91 E-value=0.11 Score=50.26 Aligned_cols=99 Identities=12% Similarity=0.101 Sum_probs=63.2
Q ss_pred CCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCcc
Q 018375 39 STPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKA 118 (357)
Q Consensus 39 ~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~ 118 (357)
....|++.|+|..-+..... +.++..| ..|-||.......+..+++..+.-...-++.+. +..+
T Consensus 2120 ~se~~~~Ffv~pIEG~tt~l-~~la~rl----------e~PaYglQ~T~~vP~dSies~A~~yirqirkvQ-----P~GP 2183 (2376)
T KOG1202|consen 2120 QSEEPPLFFVHPIEGFTTAL-ESLASRL----------EIPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQ-----PEGP 2183 (2376)
T ss_pred cccCCceEEEeccccchHHH-HHHHhhc----------CCcchhhhccccCCcchHHHHHHHHHHHHHhcC-----CCCC
Confidence 35578899999987664443 4554443 234445443333333366666655555555441 5789
Q ss_pred EEEEEeChhHHHHHHHHhcC--CCcccEEEEeccccc
Q 018375 119 RFLYGESMGGAVTLLLHKKD--PSFWNGAVLVAPMCK 153 (357)
Q Consensus 119 v~lvG~S~Gg~~a~~~a~~~--p~~v~~~vl~~~~~~ 153 (357)
..++|+|+|+.++..+|... .+....+|++++...
T Consensus 2184 Yrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGspt 2220 (2376)
T KOG1202|consen 2184 YRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGSPT 2220 (2376)
T ss_pred eeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCchH
Confidence 99999999999999998543 334566888887543
No 227
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=94.79 E-value=0.1 Score=43.98 Aligned_cols=40 Identities=18% Similarity=0.192 Sum_probs=31.2
Q ss_pred CCccEEEEEeChhHHHHHHHHhcCC-----CcccEEEEecccccc
Q 018375 115 TDKARFLYGESMGGAVTLLLHKKDP-----SFWNGAVLVAPMCKI 154 (357)
Q Consensus 115 ~~~~v~lvG~S~Gg~~a~~~a~~~p-----~~v~~~vl~~~~~~~ 154 (357)
+.+||.|+|||+|+.+......... ..|+.+++++.+...
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~ 262 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPS 262 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCC
Confidence 6778999999999998877764332 248999999876653
No 228
>PLN02324 triacylglycerol lipase
Probab=94.76 E-value=0.064 Score=46.08 Aligned_cols=20 Identities=20% Similarity=0.323 Sum_probs=17.9
Q ss_pred ccEEEEEeChhHHHHHHHHh
Q 018375 117 KARFLYGESMGGAVTLLLHK 136 (357)
Q Consensus 117 ~~v~lvG~S~Gg~~a~~~a~ 136 (357)
-.|++.|||+||.+|+..|.
T Consensus 215 ~sItvTGHSLGGALAtLaA~ 234 (415)
T PLN02324 215 ISITFTGHSLGAVMSVLSAA 234 (415)
T ss_pred ceEEEecCcHHHHHHHHHHH
Confidence 46999999999999999885
No 229
>PLN03037 lipase class 3 family protein; Provisional
Probab=94.47 E-value=0.062 Score=47.33 Aligned_cols=20 Identities=35% Similarity=0.468 Sum_probs=17.8
Q ss_pred ccEEEEEeChhHHHHHHHHh
Q 018375 117 KARFLYGESMGGAVTLLLHK 136 (357)
Q Consensus 117 ~~v~lvG~S~Gg~~a~~~a~ 136 (357)
.++.|.|||+||.+|+..|.
T Consensus 318 ~SItVTGHSLGGALAtLaA~ 337 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAY 337 (525)
T ss_pred ceEEEeccCHHHHHHHHHHH
Confidence 46999999999999998884
No 230
>PLN02802 triacylglycerol lipase
Probab=94.37 E-value=0.08 Score=46.57 Aligned_cols=21 Identities=29% Similarity=0.460 Sum_probs=18.2
Q ss_pred ccEEEEEeChhHHHHHHHHhc
Q 018375 117 KARFLYGESMGGAVTLLLHKK 137 (357)
Q Consensus 117 ~~v~lvG~S~Gg~~a~~~a~~ 137 (357)
.+|++.|||+||.+|...|..
T Consensus 330 ~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 330 LSITVTGHSLGAALALLVADE 350 (509)
T ss_pred ceEEEeccchHHHHHHHHHHH
Confidence 468999999999999988753
No 231
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.15 E-value=0.12 Score=38.19 Aligned_cols=38 Identities=13% Similarity=0.234 Sum_probs=34.2
Q ss_pred CccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccccc
Q 018375 116 DKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMCK 153 (357)
Q Consensus 116 ~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 153 (357)
....++-|-||||+.|+.+..++|+.+.++|.+++..+
T Consensus 100 pgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYd 137 (227)
T COG4947 100 PGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYD 137 (227)
T ss_pred CCCccccccchhhhhhhhhheeChhHhhhheeecceee
Confidence 35578899999999999999999999999999998765
No 232
>PLN02753 triacylglycerol lipase
Probab=93.82 E-value=0.12 Score=45.62 Aligned_cols=39 Identities=21% Similarity=0.228 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHhhhc---cCCccEEEEEeChhHHHHHHHHh
Q 018375 98 VNDCDDFFKSVCAQEE---YTDKARFLYGESMGGAVTLLLHK 136 (357)
Q Consensus 98 ~~d~~~~l~~l~~~~~---~~~~~v~lvG~S~Gg~~a~~~a~ 136 (357)
.+.+.+.|+.+.++.. ...-+|.+.|||+||.+|+..|.
T Consensus 290 reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 290 REQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 3444444444433221 12458999999999999999884
No 233
>PLN02761 lipase class 3 family protein
Probab=93.81 E-value=0.13 Score=45.49 Aligned_cols=21 Identities=19% Similarity=0.325 Sum_probs=18.2
Q ss_pred CccEEEEEeChhHHHHHHHHh
Q 018375 116 DKARFLYGESMGGAVTLLLHK 136 (357)
Q Consensus 116 ~~~v~lvG~S~Gg~~a~~~a~ 136 (357)
.-+|.+.|||+||.+|+..|.
T Consensus 293 ~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 293 EISITVTGHSLGASLALVSAY 313 (527)
T ss_pred CceEEEeccchHHHHHHHHHH
Confidence 347999999999999998884
No 234
>PLN02847 triacylglycerol lipase
Probab=93.74 E-value=0.12 Score=46.38 Aligned_cols=23 Identities=30% Similarity=0.374 Sum_probs=19.8
Q ss_pred CCccEEEEEeChhHHHHHHHHhc
Q 018375 115 TDKARFLYGESMGGAVTLLLHKK 137 (357)
Q Consensus 115 ~~~~v~lvG~S~Gg~~a~~~a~~ 137 (357)
+.-+++++|||+||.+|..++..
T Consensus 249 PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 249 PDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CCCeEEEeccChHHHHHHHHHHH
Confidence 56689999999999999888753
No 235
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=93.72 E-value=0.32 Score=38.62 Aligned_cols=64 Identities=22% Similarity=0.370 Sum_probs=38.9
Q ss_pred CcEEEEeCCCCC-cc-CC-CCCccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhc
Q 018375 70 GYAVFGIDYEGH-GR-SR-GARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKK 137 (357)
Q Consensus 70 G~~vi~~d~~G~-G~-s~-~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~ 137 (357)
|+.+..+++|.. +- +. .......+..+-++.+.++++.... ..++++++|+|.|+.++...+.+
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~----~~~~vvV~GySQGA~Va~~~~~~ 68 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIA----AGGPVVVFGYSQGAVVASNVLRR 68 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhcc----CCCCEEEEEECHHHHHHHHHHHH
Confidence 577788888862 11 00 1111223455555555555554322 46889999999999999887743
No 236
>PLN02719 triacylglycerol lipase
Probab=93.64 E-value=0.11 Score=45.83 Aligned_cols=20 Identities=30% Similarity=0.419 Sum_probs=18.0
Q ss_pred ccEEEEEeChhHHHHHHHHh
Q 018375 117 KARFLYGESMGGAVTLLLHK 136 (357)
Q Consensus 117 ~~v~lvG~S~Gg~~a~~~a~ 136 (357)
.+|.+.|||+||.+|+..|.
T Consensus 298 ~sItVTGHSLGGALAtLaA~ 317 (518)
T PLN02719 298 LSITVTGHSLGGALAVLSAY 317 (518)
T ss_pred ceEEEecCcHHHHHHHHHHH
Confidence 47999999999999999884
No 237
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=93.30 E-value=0.21 Score=40.15 Aligned_cols=36 Identities=31% Similarity=0.425 Sum_probs=27.5
Q ss_pred cCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccc
Q 018375 114 YTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPM 151 (357)
Q Consensus 114 ~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 151 (357)
++..++.+-|||+||.+|..+..++. +-.+..-+|.
T Consensus 273 Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesPG 308 (425)
T COG5153 273 YPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESPG 308 (425)
T ss_pred CCCceEEEeccccchHHHHHhccccC--CceEEecCch
Confidence 47889999999999999999987764 4444444443
No 238
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=93.30 E-value=0.21 Score=40.15 Aligned_cols=36 Identities=31% Similarity=0.425 Sum_probs=27.5
Q ss_pred cCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccc
Q 018375 114 YTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPM 151 (357)
Q Consensus 114 ~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 151 (357)
++..++.+-|||+||.+|..+..++. +-.+..-+|.
T Consensus 273 Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesPG 308 (425)
T KOG4540|consen 273 YPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESPG 308 (425)
T ss_pred CCCceEEEeccccchHHHHHhccccC--CceEEecCch
Confidence 47889999999999999999987764 4444444443
No 239
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=93.28 E-value=0.13 Score=43.74 Aligned_cols=88 Identities=15% Similarity=0.124 Sum_probs=47.2
Q ss_pred CCCceEEEEEccCCc-cccccHHHHHHHHhhC--CcEEEEeCCCCCccCCCCCccc-cchhhHHHHHHHHHHHHHhhhcc
Q 018375 39 STPKAVVFLCHGYGM-ECSGFMRECGTRLASA--GYAVFGIDYEGHGRSRGARCYI-KKFENIVNDCDDFFKSVCAQEEY 114 (357)
Q Consensus 39 ~~~~p~vv~lHG~~~-~~~~~~~~~~~~l~~~--G~~vi~~d~~G~G~s~~~~~~~-~~~~~~~~d~~~~l~~l~~~~~~ 114 (357)
.++.-.||+.||+-+ +...| ..-+...... +..++...+.+. ........ .--...++++.+.+...
T Consensus 77 ~k~~HLvVlthGi~~~~~~~~-~~~~~~~~kk~p~~~iv~~g~~~~--~~~T~~Gv~~lG~Rla~~~~e~~~~~------ 147 (405)
T KOG4372|consen 77 TKPKHLVVLTHGLHGADMEYW-KEKIEQMTKKMPDKLIVVRGKMNN--MCQTFDGVDVLGERLAEEVKETLYDY------ 147 (405)
T ss_pred cCCceEEEeccccccccHHHH-HHHHHhhhcCCCcceEeeeccccc--hhhccccceeeecccHHHHhhhhhcc------
Confidence 445678999999877 33333 4444444443 233333333322 11111110 01133444444444444
Q ss_pred CCccEEEEEeChhHHHHHHHH
Q 018375 115 TDKARFLYGESMGGAVTLLLH 135 (357)
Q Consensus 115 ~~~~v~lvG~S~Gg~~a~~~a 135 (357)
...++-.+|||+||.++..+.
T Consensus 148 si~kISfvghSLGGLvar~AI 168 (405)
T KOG4372|consen 148 SIEKISFVGHSLGGLVARYAI 168 (405)
T ss_pred ccceeeeeeeecCCeeeeEEE
Confidence 468999999999998876554
No 240
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=93.11 E-value=0.15 Score=43.43 Aligned_cols=35 Identities=17% Similarity=0.304 Sum_probs=26.4
Q ss_pred hHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHh
Q 018375 96 NIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHK 136 (357)
Q Consensus 96 ~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~ 136 (357)
.+.+++..++... +.-++.+.|||+||.+|..+|.
T Consensus 156 ~~~~~~~~L~~~~------~~~~i~vTGHSLGgAlA~laa~ 190 (336)
T KOG4569|consen 156 GLDAELRRLIELY------PNYSIWVTGHSLGGALASLAAL 190 (336)
T ss_pred HHHHHHHHHHHhc------CCcEEEEecCChHHHHHHHHHH
Confidence 4445555555555 5778999999999999988885
No 241
>PF03283 PAE: Pectinacetylesterase
Probab=92.10 E-value=0.87 Score=39.14 Aligned_cols=52 Identities=19% Similarity=0.134 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHH----hcCCCcccEEEEecc
Q 018375 99 NDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLH----KKDPSFWNGAVLVAP 150 (357)
Q Consensus 99 ~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a----~~~p~~v~~~vl~~~ 150 (357)
..+.+++++|..+.-...++|+|.|.|.||.-++..+ ...|..++-..+.++
T Consensus 138 ~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~Ds 193 (361)
T PF03283_consen 138 RILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDS 193 (361)
T ss_pred HHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccc
Confidence 4567778887665122467899999999999887765 345643444444444
No 242
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=91.72 E-value=0.76 Score=41.20 Aligned_cols=71 Identities=21% Similarity=0.320 Sum_probs=52.6
Q ss_pred cccEEEEeeCCCccCChHHHHHHHHHccC----------CCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHHhccc
Q 018375 234 MIPFFVLHGEADTVTDPEVSKALYERASS----------RDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDERMSD 303 (357)
Q Consensus 234 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~~~ 303 (357)
--.+++.||..|.++++.....+++++.. .-.++..+||.+|..--..+.. -++...|.+|+++-..+
T Consensus 353 GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~--~d~l~aL~~WVE~G~AP 430 (474)
T PF07519_consen 353 GGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDP--FDALTALVDWVENGKAP 430 (474)
T ss_pred CCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCC--CCHHHHHHHHHhCCCCC
Confidence 46799999999999999877777765532 1358899999999875332221 24899999999977666
Q ss_pred ccc
Q 018375 304 ANA 306 (357)
Q Consensus 304 ~~~ 306 (357)
...
T Consensus 431 ~~l 433 (474)
T PF07519_consen 431 ETL 433 (474)
T ss_pred Cee
Confidence 553
No 243
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=90.12 E-value=2.2 Score=28.88 Aligned_cols=83 Identities=11% Similarity=0.061 Sum_probs=52.5
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHH--HHHHHHh
Q 018375 59 MRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGA--VTLLLHK 136 (357)
Q Consensus 59 ~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~--~a~~~a~ 136 (357)
+..+.+.+..+||..-.+.++..|.+....-.....+.-...+..+++.. +..+++++|-|--.= +-..+|.
T Consensus 13 y~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~f------P~~kfiLIGDsgq~DpeiY~~ia~ 86 (100)
T PF09949_consen 13 YPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDF------PERKFILIGDSGQHDPEIYAEIAR 86 (100)
T ss_pred HHHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHC------CCCcEEEEeeCCCcCHHHHHHHHH
Confidence 36667777777787666777766554322111001123344566666666 789999999996654 3445678
Q ss_pred cCCCcccEEEE
Q 018375 137 KDPSFWNGAVL 147 (357)
Q Consensus 137 ~~p~~v~~~vl 147 (357)
++|++|.++.+
T Consensus 87 ~~P~~i~ai~I 97 (100)
T PF09949_consen 87 RFPGRILAIYI 97 (100)
T ss_pred HCCCCEEEEEE
Confidence 89999988754
No 244
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=89.69 E-value=6.1 Score=32.87 Aligned_cols=99 Identities=15% Similarity=0.041 Sum_probs=60.5
Q ss_pred CCCCceEEEEEccCCc----cccccHHHHHHHHhh-CCcEEEEeCCCCCccCCCCC----------cccc--chhhHHHH
Q 018375 38 FSTPKAVVFLCHGYGM----ECSGFMRECGTRLAS-AGYAVFGIDYEGHGRSRGAR----------CYIK--KFENIVND 100 (357)
Q Consensus 38 ~~~~~p~vv~lHG~~~----~~~~~~~~~~~~l~~-~G~~vi~~d~~G~G~s~~~~----------~~~~--~~~~~~~d 100 (357)
.+..+..|+++-|... ....-.-.+...|.. .+..++++--+|.|.-.-.. .... --..+.+.
T Consensus 27 ~ds~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~n 106 (423)
T COG3673 27 EDSMKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQN 106 (423)
T ss_pred ccCcceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHH
Confidence 3456777888888432 221112344455554 57888888888887542110 0000 01234556
Q ss_pred HHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhc
Q 018375 101 CDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKK 137 (357)
Q Consensus 101 ~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~ 137 (357)
|..+...|..... +.++|.++|+|-|+++|--+|..
T Consensus 107 I~~AYrFL~~~ye-pGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 107 IREAYRFLIFNYE-PGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHHHHhcC-CCCeEEEeeccchhHHHHHHHHH
Confidence 7777777755444 57899999999999999888754
No 245
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.41 E-value=1.5 Score=39.53 Aligned_cols=51 Identities=20% Similarity=0.296 Sum_probs=30.7
Q ss_pred HHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHh-----cCCC------cccEEEEeccc
Q 018375 101 CDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHK-----KDPS------FWNGAVLVAPM 151 (357)
Q Consensus 101 ~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~-----~~p~------~v~~~vl~~~~ 151 (357)
...+++.+....-.+..+++.+||||||.++=.+.. ..|+ .-.++++++.+
T Consensus 510 s~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~P 571 (697)
T KOG2029|consen 510 SNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVP 571 (697)
T ss_pred HHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecC
Confidence 334555554322223788999999999998765543 2333 24566666554
No 246
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=89.28 E-value=3.3 Score=34.24 Aligned_cols=94 Identities=16% Similarity=0.115 Sum_probs=51.6
Q ss_pred eEEEEEccCCcccccc-----HHHHHHHH-hhCCcEEEEeCCCCCccC--------CCCCc--cccch-hhHHHHHHHHH
Q 018375 43 AVVFLCHGYGMECSGF-----MRECGTRL-ASAGYAVFGIDYEGHGRS--------RGARC--YIKKF-ENIVNDCDDFF 105 (357)
Q Consensus 43 p~vv~lHG~~~~~~~~-----~~~~~~~l-~~~G~~vi~~d~~G~G~s--------~~~~~--~~~~~-~~~~~d~~~~l 105 (357)
..|||+=|.+.+...- ...+.+.+ ...+-..+++=.+|.|.. ..... ....+ ....+.+..+.
T Consensus 2 ~iv~~fDGT~n~~~~~~~~TNV~rL~~~~~~~~~~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~ay 81 (277)
T PF09994_consen 2 RIVVFFDGTGNNPDNDPPPTNVARLYDAYKDRDGERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDAY 81 (277)
T ss_pred cEEEEecCCCCCCCCCccccHHHHHHHHhhccCCCceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHHH
Confidence 4678888866543311 12444555 222334455556677761 11100 00011 23344555555
Q ss_pred HHHHhhhccCCccEEEEEeChhHHHHHHHHhc
Q 018375 106 KSVCAQEEYTDKARFLYGESMGGAVTLLLHKK 137 (357)
Q Consensus 106 ~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~ 137 (357)
..+..... +.+++.++|+|-|+++|-.++..
T Consensus 82 ~~l~~~~~-~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 82 RFLSKNYE-PGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred HHHHhccC-CcceEEEEecCccHHHHHHHHHH
Confidence 55544332 56789999999999999988854
No 247
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=87.87 E-value=3.7 Score=36.29 Aligned_cols=121 Identities=20% Similarity=0.174 Sum_probs=62.1
Q ss_pred EEEEEEEcC--CCCCceEEEEEccCCcccc--ccHHHHHHHHhhC-CcEEEEeCCC----CC---ccCCCCCccccchhh
Q 018375 29 QLFTCRWLP--FSTPKAVVFLCHGYGMECS--GFMRECGTRLASA-GYAVFGIDYE----GH---GRSRGARCYIKKFEN 96 (357)
Q Consensus 29 ~l~~~~~~p--~~~~~p~vv~lHG~~~~~~--~~~~~~~~~l~~~-G~~vi~~d~~----G~---G~s~~~~~~~~~~~~ 96 (357)
-|+..+|.| ...+..++|.+-|.|.-+. ...-.=.+.|+.. ...|+.++|| |+ +..+..++.. .+-
T Consensus 120 CLYlNVW~P~~~p~n~tVlVWiyGGGF~sGt~SLdvYdGk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNm-Gl~- 197 (601)
T KOG4389|consen 120 CLYLNVWAPAADPYNLTVLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNM-GLL- 197 (601)
T ss_pred ceEEEEeccCCCCCCceEEEEEEcCccccCCcceeeeccceeeeeccEEEEEeeeeeccceEEecCCCCCCCCcc-chH-
Confidence 367778888 3344557888888653211 1101112445444 3556777777 21 1122122221 111
Q ss_pred HHHHHHHHHHHHHh---hhccCCccEEEEEeChhHHH-HHHHHh-cCCCcccEEEEecccccc
Q 018375 97 IVNDCDDFFKSVCA---QEEYTDKARFLYGESMGGAV-TLLLHK-KDPSFWNGAVLVAPMCKI 154 (357)
Q Consensus 97 ~~~d~~~~l~~l~~---~~~~~~~~v~lvG~S~Gg~~-a~~~a~-~~p~~v~~~vl~~~~~~~ 154 (357)
|-.-+++++++ ..+.+..+|.|+|.|.|+.- .+.+.+ .-...++..|+-++....
T Consensus 198 ---DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS~~~ 257 (601)
T KOG4389|consen 198 ---DQQLALQWVQENIAAFGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGSLNN 257 (601)
T ss_pred ---HHHHHHHHHHHhHHHhCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCCCCC
Confidence 22334455543 23446789999999999973 333332 112346777776655443
No 248
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=85.87 E-value=6.6 Score=27.85 Aligned_cols=62 Identities=11% Similarity=0.245 Sum_probs=37.3
Q ss_pred CCCceEEEEEccCCccccccHH-HHHHHHhhCCcE-------EEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHh
Q 018375 39 STPKAVVFLCHGYGMECSGFMR-ECGTRLASAGYA-------VFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCA 110 (357)
Q Consensus 39 ~~~~p~vv~lHG~~~~~~~~~~-~~~~~l~~~G~~-------vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~ 110 (357)
.+.+|.|+-+||+.|....|.. -+++.|-..|.. +...|+|-. ..++++-+++...|.....
T Consensus 49 ~p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G~~S~~V~~f~~~~hFP~~----------~~v~~Yk~~L~~~I~~~v~ 118 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSGMKSPFVHQFIATHHFPHN----------SNVDEYKEQLKSWIRGNVS 118 (127)
T ss_pred CCCCCEEEEeecCCCCcHHHHHHHHHHHHHhcccCCCceeeecccccCCCc----------hHHHHHHHHHHHHHHHHHH
Confidence 4678999999999998776643 455665555421 222333311 1456666677776666543
No 249
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=83.28 E-value=3.5 Score=36.55 Aligned_cols=41 Identities=15% Similarity=0.173 Sum_probs=31.5
Q ss_pred CCccEEEEEeChhHHHHHHHHhc-----CCCcccEEEEeccccccc
Q 018375 115 TDKARFLYGESMGGAVTLLLHKK-----DPSFWNGAVLVAPMCKIS 155 (357)
Q Consensus 115 ~~~~v~lvG~S~Gg~~a~~~a~~-----~p~~v~~~vl~~~~~~~~ 155 (357)
+.+||.|||+|+|+.+....... .-..|..+++++.+....
T Consensus 445 G~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k 490 (633)
T KOG2385|consen 445 GNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTK 490 (633)
T ss_pred CCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCC
Confidence 78999999999999988755531 223589999998876543
No 250
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=81.34 E-value=11 Score=29.38 Aligned_cols=44 Identities=20% Similarity=0.292 Sum_probs=30.8
Q ss_pred CCCCceEEEEEccCCccccccHHHHHHHHhhCCc-EEEEeCCCCC
Q 018375 38 FSTPKAVVFLCHGYGMECSGFMRECGTRLASAGY-AVFGIDYEGH 81 (357)
Q Consensus 38 ~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~-~vi~~d~~G~ 81 (357)
-.....+|++.||...++...+..+-..|.+.|| .|++...-|+
T Consensus 134 l~k~e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~y 178 (265)
T COG4822 134 LNKDEILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGY 178 (265)
T ss_pred cCcCeEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCC
Confidence 3455678999999887766666667677778888 6666555444
No 251
>PRK12467 peptide synthase; Provisional
Probab=79.02 E-value=19 Score=42.12 Aligned_cols=98 Identities=13% Similarity=0.039 Sum_probs=64.3
Q ss_pred ceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEEE
Q 018375 42 KAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFL 121 (357)
Q Consensus 42 ~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l 121 (357)
.+.|++.|...+....+ ..+...+.. +..++.+..++.-..... ..+++..+....+.+.+.. ...+..+
T Consensus 3692 ~~~l~~~h~~~r~~~~~-~~l~~~l~~-~~~~~~l~~~~~~~d~~~---~~~~~~~~~~y~~~~~~~~-----~~~p~~l 3761 (3956)
T PRK12467 3692 FPALFCRHEGLGTVFDY-EPLAVILEG-DRHVLGLTCRHLLDDGWQ---DTSLQAMAVQYADYILWQQ-----AKGPYGL 3761 (3956)
T ss_pred ccceeeechhhcchhhh-HHHHHHhCC-CCcEEEEeccccccccCC---ccchHHHHHHHHHHHHHhc-----cCCCeee
Confidence 45699999987765544 677777754 377888877665322221 1256666666666666652 3567899
Q ss_pred EEeChhHHHHHHHHhc---CCCcccEEEEec
Q 018375 122 YGESMGGAVTLLLHKK---DPSFWNGAVLVA 149 (357)
Q Consensus 122 vG~S~Gg~~a~~~a~~---~p~~v~~~vl~~ 149 (357)
.|+|+||.++..++.. ..+.+..+.++.
T Consensus 3762 ~g~s~g~~~a~~~~~~l~~~g~~~~~~~~~~ 3792 (3956)
T PRK12467 3762 LGWSLGGTLARLVAELLEREGESEAFLGLFD 3792 (3956)
T ss_pred eeeecchHHHHHHHHHHHHcCCceeEEEEEe
Confidence 9999999999888753 334455555554
No 252
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=74.44 E-value=17 Score=28.43 Aligned_cols=72 Identities=11% Similarity=-0.013 Sum_probs=45.7
Q ss_pred HHHHHhhCCc-EEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeCh----hHHHHHHHHh
Q 018375 62 CGTRLASAGY-AVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESM----GGAVTLLLHK 136 (357)
Q Consensus 62 ~~~~l~~~G~-~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~----Gg~~a~~~a~ 136 (357)
....+...|. .|+..+-+.... ++.+.+++-+.++++.. + ..++|+|+|. |..++..+|+
T Consensus 68 ~~~~l~~~G~d~V~~~~~~~~~~--------~~~e~~a~al~~~i~~~------~-p~lVL~~~t~~~~~grdlaprlAa 132 (202)
T cd01714 68 ALREALAMGADRAILVSDRAFAG--------ADTLATAKALAAAIKKI------G-VDLILTGKQSIDGDTGQVGPLLAE 132 (202)
T ss_pred HHHHHHHcCCCEEEEEecccccC--------CChHHHHHHHHHHHHHh------C-CCEEEEcCCcccCCcCcHHHHHHH
Confidence 3344455565 677777654322 25667777777777665 3 5789999998 7788888887
Q ss_pred cCC-CcccEEEEe
Q 018375 137 KDP-SFWNGAVLV 148 (357)
Q Consensus 137 ~~p-~~v~~~vl~ 148 (357)
+.. ..+..++-+
T Consensus 133 rLga~lvsdv~~l 145 (202)
T cd01714 133 LLGWPQITYVSKI 145 (202)
T ss_pred HhCCCccceEEEE
Confidence 643 234444443
No 253
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=71.49 E-value=33 Score=30.11 Aligned_cols=38 Identities=18% Similarity=0.190 Sum_probs=28.5
Q ss_pred EEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCC
Q 018375 45 VFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSR 85 (357)
Q Consensus 45 vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~ 85 (357)
|||+|...- ..| +.+++.|+++|+.|.++-..+.+...
T Consensus 2 il~~~~~~p--~~~-~~la~~L~~~G~~v~~~~~~~~~~~~ 39 (396)
T cd03818 2 ILFVHQNFP--GQF-RHLAPALAAQGHEVVFLTEPNAAPPP 39 (396)
T ss_pred EEEECCCCc--hhH-HHHHHHHHHCCCEEEEEecCCCCCCC
Confidence 788987542 234 88999999999999888776665433
No 254
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=70.26 E-value=19 Score=28.95 Aligned_cols=39 Identities=18% Similarity=0.220 Sum_probs=29.0
Q ss_pred CceEEEEEccCCc--cccccHHHHHHHHhhCCcEEEEeCCC
Q 018375 41 PKAVVFLCHGYGM--ECSGFMRECGTRLASAGYAVFGIDYE 79 (357)
Q Consensus 41 ~~p~vv~lHG~~~--~~~~~~~~~~~~l~~~G~~vi~~d~~ 79 (357)
..|.|+|++-... +...|...+.+.|.+.|+.|..++..
T Consensus 30 ~~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~ 70 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRV 70 (233)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccc
Confidence 3566999998663 34456667778888889999888865
No 255
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=70.11 E-value=21 Score=28.18 Aligned_cols=41 Identities=10% Similarity=0.071 Sum_probs=30.5
Q ss_pred CCceEEEEEccCCccccccHHHHHHHHhhC-CcEEEEeCCCC
Q 018375 40 TPKAVVFLCHGYGMECSGFMRECGTRLASA-GYAVFGIDYEG 80 (357)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~-G~~vi~~d~~G 80 (357)
+..+.|+|++-.......|...+...|.+. |+.+..++...
T Consensus 29 ~~~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~~~ 70 (212)
T cd03146 29 KARPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHLFD 70 (212)
T ss_pred cCCCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEeccC
Confidence 345678999887765556667788888888 99988887543
No 256
>PRK02399 hypothetical protein; Provisional
Probab=69.32 E-value=79 Score=27.78 Aligned_cols=100 Identities=13% Similarity=0.047 Sum_probs=58.3
Q ss_pred EEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCc----------------------cccchhhHHHHHHH
Q 018375 46 FLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARC----------------------YIKKFENIVNDCDD 103 (357)
Q Consensus 46 v~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~----------------------~~~~~~~~~~d~~~ 103 (357)
|++=|...+...-+..+.+.+.+.|..|+.+|.-..|......+ ....++.+.+-+..
T Consensus 6 I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga~~ 85 (406)
T PRK02399 6 IYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGAAA 85 (406)
T ss_pred EEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHHHH
Confidence 44455555544444666777777899999999844432211100 00011223333444
Q ss_pred HHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEE
Q 018375 104 FFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVL 147 (357)
Q Consensus 104 ~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl 147 (357)
++..|.++ ....-++-+|-|.|..++.......|--+-++++
T Consensus 86 ~v~~L~~~--g~i~gviglGGs~GT~lat~aMr~LPiG~PKlmV 127 (406)
T PRK02399 86 FVRELYER--GDVAGVIGLGGSGGTALATPAMRALPIGVPKLMV 127 (406)
T ss_pred HHHHHHhc--CCccEEEEecCcchHHHHHHHHHhCCCCCCeEEE
Confidence 44444222 1356688899999999999998887765555544
No 257
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=67.52 E-value=54 Score=25.10 Aligned_cols=39 Identities=21% Similarity=0.273 Sum_probs=30.1
Q ss_pred CCceEEEEEccCCccccc-cHHHHHHHHhhCCcEEEEeCC
Q 018375 40 TPKAVVFLCHGYGMECSG-FMRECGTRLASAGYAVFGIDY 78 (357)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~-~~~~~~~~l~~~G~~vi~~d~ 78 (357)
+.++.+|++.|+.++... .-..+.+.|.+.|++++..|-
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDG 59 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDG 59 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecC
Confidence 456789999999876543 235677888889999999994
No 258
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=67.22 E-value=76 Score=27.86 Aligned_cols=101 Identities=13% Similarity=0.061 Sum_probs=60.6
Q ss_pred EEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCcc----------------------ccchhhHHHHH
Q 018375 44 VVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCY----------------------IKKFENIVNDC 101 (357)
Q Consensus 44 ~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~----------------------~~~~~~~~~d~ 101 (357)
+|+++ |...+...-+..+.+.+.+.|..|+.+|.--.+.+...... ...++.+.+-+
T Consensus 3 tI~ii-gT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga 81 (403)
T PF06792_consen 3 TIAII-GTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGA 81 (403)
T ss_pred EEEEE-EccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHH
Confidence 34444 44444444346777888889999999997655444322100 01122333344
Q ss_pred HHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEE
Q 018375 102 DDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVL 147 (357)
Q Consensus 102 ~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl 147 (357)
..++..+.++. ...-|+-+|-|.|..++.......|--+-++++
T Consensus 82 ~~~v~~l~~~g--~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmV 125 (403)
T PF06792_consen 82 ARFVSDLYDEG--KIDGVIGIGGSGGTALATAAMRALPIGFPKLMV 125 (403)
T ss_pred HHHHHHHHhcC--CccEEEEecCCccHHHHHHHHHhCCCCCCeEEE
Confidence 45555553221 345678899999999999999887765555544
No 259
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=66.87 E-value=31 Score=28.11 Aligned_cols=41 Identities=15% Similarity=0.064 Sum_probs=28.0
Q ss_pred CCCceEEEEEccCCccccccHHHHHHHHhhCCc-EEEEeCCC
Q 018375 39 STPKAVVFLCHGYGMECSGFMRECGTRLASAGY-AVFGIDYE 79 (357)
Q Consensus 39 ~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~-~vi~~d~~ 79 (357)
+++.|.|++++-.++....+.+.+.+.|.+.|+ .|..++.+
T Consensus 25 g~~~~rI~~iptAS~~~~~~~~~~~~~~~~lG~~~v~~l~i~ 66 (250)
T TIGR02069 25 GGEDAIIVIITSASEEPREVGERYITIFSRLGVKEVKILDVR 66 (250)
T ss_pred CCCCceEEEEeCCCCChHHHHHHHHHHHHHcCCceeEEEecC
Confidence 445677999987665544555677788888888 45566664
No 260
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=66.01 E-value=22 Score=22.61 Aligned_cols=43 Identities=14% Similarity=0.132 Sum_probs=27.0
Q ss_pred hHHHHHHHHHHHHHhhhcc-CCccEEEEEeChhHHHHHHHHhcC
Q 018375 96 NIVNDCDDFFKSVCAQEEY-TDKARFLYGESMGGAVTLLLHKKD 138 (357)
Q Consensus 96 ~~~~d~~~~l~~l~~~~~~-~~~~v~lvG~S~Gg~~a~~~a~~~ 138 (357)
-..+.+.+.+++++.+... +.+++.++|-|.|=.+|.+.++.+
T Consensus 18 GC~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 18 GCARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp HHHHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHh
Confidence 3445556666666553332 457899999999999998887654
No 261
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=62.11 E-value=15 Score=27.78 Aligned_cols=25 Identities=24% Similarity=0.254 Sum_probs=20.9
Q ss_pred CCccEEEEEeChhHHHHHHHHhcCC
Q 018375 115 TDKARFLYGESMGGAVTLLLHKKDP 139 (357)
Q Consensus 115 ~~~~v~lvG~S~Gg~~a~~~a~~~p 139 (357)
+...-.++|-|+|+.++..++...+
T Consensus 24 gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 24 GPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred CCCCCEEEEECHHHHHHHHHHcCCC
Confidence 4557789999999999999997654
No 262
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=62.02 E-value=39 Score=25.28 Aligned_cols=52 Identities=21% Similarity=0.204 Sum_probs=29.3
Q ss_pred hhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEecc
Q 018375 95 ENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAP 150 (357)
Q Consensus 95 ~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~ 150 (357)
++..+++.++++.+.. ...+|+++|-|..|..-+.++...++.|..++=.+|
T Consensus 51 ~~~~~~l~~~L~~~~~----~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np 102 (160)
T PF08484_consen 51 EQSKAELREFLEKLKA----EGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNP 102 (160)
T ss_dssp HHHHHHHHHHHHHHHH----TT--EEEE---SHHHHHHHHHT--TTTS--EEES-G
T ss_pred HHHHHHHHHHHHHHHH----cCCEEEEECcchHHHHHHHHhCCCcceeEEEEeCCh
Confidence 3344455555555543 468899999999999989888776777877776655
No 263
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=61.96 E-value=23 Score=25.18 Aligned_cols=36 Identities=19% Similarity=0.245 Sum_probs=23.0
Q ss_pred CceEEEEEccCCcc-------------ccccHH----------HHHHHHhhCCcEEEEe
Q 018375 41 PKAVVFLCHGYGME-------------CSGFMR----------ECGTRLASAGYAVFGI 76 (357)
Q Consensus 41 ~~p~vv~lHG~~~~-------------~~~~~~----------~~~~~l~~~G~~vi~~ 76 (357)
...++||+||-..+ ...|.+ .....|.+.|++|+++
T Consensus 56 ~y~~viFvHGCFWh~H~c~~a~vPksnt~fWleKi~kNveRD~r~~~~L~~~GwrvlvV 114 (150)
T COG3727 56 KYRCVIFVHGCFWHGHHCYLAKVPKSNTEFWLEKIGKNVERDERDIKRLQQLGWRVLVV 114 (150)
T ss_pred CceEEEEEeeeeccCCccccccCCCcchHHHHHHHhhhhhhhHHHHHHHHHcCCeEEEE
Confidence 45689999994322 112322 3456788889998776
No 264
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=59.74 E-value=1e+02 Score=25.61 Aligned_cols=39 Identities=26% Similarity=0.273 Sum_probs=28.3
Q ss_pred CCccEEEEEeChhHHHHHHHH---hcCCCcccEEEEeccccc
Q 018375 115 TDKARFLYGESMGGAVTLLLH---KKDPSFWNGAVLVAPMCK 153 (357)
Q Consensus 115 ~~~~v~lvG~S~Gg~~a~~~a---~~~p~~v~~~vl~~~~~~ 153 (357)
.-.+++|.|.|+|++-+...- ...-+.++++++.+|+..
T Consensus 107 ~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~ 148 (289)
T PF10081_consen 107 RRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFF 148 (289)
T ss_pred cCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCC
Confidence 346799999999998665443 223356999999998754
No 265
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=59.47 E-value=16 Score=28.18 Aligned_cols=33 Identities=18% Similarity=0.096 Sum_probs=23.5
Q ss_pred HHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcC
Q 018375 103 DFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKD 138 (357)
Q Consensus 103 ~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~ 138 (357)
.+++.+.+. +...-.++|.|.||.+|..++...
T Consensus 16 Gvl~~L~e~---~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 16 GALKALEEA---GILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHHHc---CCCcceEEEECHHHHHHHHHHcCC
Confidence 344444332 345578999999999999998754
No 266
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=59.44 E-value=15 Score=31.00 Aligned_cols=19 Identities=32% Similarity=0.562 Sum_probs=16.6
Q ss_pred EEEEeChhHHHHHHHHhcC
Q 018375 120 FLYGESMGGAVTLLLHKKD 138 (357)
Q Consensus 120 ~lvG~S~Gg~~a~~~a~~~ 138 (357)
.+.|.|+||.+|+.++..+
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 5899999999999999644
No 267
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=59.27 E-value=16 Score=30.86 Aligned_cols=24 Identities=17% Similarity=0.221 Sum_probs=20.4
Q ss_pred CCccEEEEEeChhHHHHHHHHhcC
Q 018375 115 TDKARFLYGESMGGAVTLLLHKKD 138 (357)
Q Consensus 115 ~~~~v~lvG~S~Gg~~a~~~a~~~ 138 (357)
+...-.++|.|+|+.++..++..+
T Consensus 41 gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 41 GIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred CCCCCEEEEECHHHHHHHHHHcCC
Confidence 556678999999999999999764
No 268
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=59.24 E-value=31 Score=29.72 Aligned_cols=88 Identities=17% Similarity=0.118 Sum_probs=55.3
Q ss_pred CceEEEEEccCCcccc-------ccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhc
Q 018375 41 PKAVVFLCHGYGMECS-------GFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEE 113 (357)
Q Consensus 41 ~~p~vv~lHG~~~~~~-------~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~ 113 (357)
+...||++||-..+.. .| ..+++.+.++|+ +..+|.--.|.-+ .+++.+.-+..++...
T Consensus 170 ~~~~vvLLH~CcHNPTG~D~t~~qW-~~l~~~~~~r~l-ip~~D~AYQGF~~-------GleeDa~~lR~~a~~~----- 235 (396)
T COG1448 170 PEGSVVLLHGCCHNPTGIDPTEEQW-QELADLIKERGL-IPFFDIAYQGFAD-------GLEEDAYALRLFAEVG----- 235 (396)
T ss_pred CCCCEEEEecCCCCCCCCCCCHHHH-HHHHHHHHHcCC-eeeeehhhhhhcc-------chHHHHHHHHHHHHhC-----
Confidence 3456999999765533 34 888888888864 5566765554433 3343344444444332
Q ss_pred cCCccEEEEEeChhHHHHHHHHhcCCCcccEEEEeccc
Q 018375 114 YTDKARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPM 151 (357)
Q Consensus 114 ~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 151 (357)
+-.+|..|+.=..+ .|.+||-++.+++.-
T Consensus 236 ----~~~lva~S~SKnfg-----LYgERVGa~~vva~~ 264 (396)
T COG1448 236 ----PELLVASSFSKNFG-----LYGERVGALSVVAED 264 (396)
T ss_pred ----CcEEEEehhhhhhh-----hhhhccceeEEEeCC
Confidence 22788888765544 467899999888653
No 269
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=58.68 E-value=7.4 Score=35.49 Aligned_cols=38 Identities=21% Similarity=0.342 Sum_probs=29.9
Q ss_pred cEEEEEeChhHHHHHHHHhcCCC-cccEEEEeccccccc
Q 018375 118 ARFLYGESMGGAVTLLLHKKDPS-FWNGAVLVAPMCKIS 155 (357)
Q Consensus 118 ~v~lvG~S~Gg~~a~~~a~~~p~-~v~~~vl~~~~~~~~ 155 (357)
.|+-.+.|-||..++..|.+..+ .|++++...|...+.
T Consensus 286 ~VIAssvSNGGgAal~AAEqD~~glIdgVvv~EP~v~~~ 324 (690)
T PF10605_consen 286 LVIASSVSNGGGAALAAAEQDTQGLIDGVVVSEPNVNLP 324 (690)
T ss_pred EEEEEeecCccHHHHhHhhcccCCceeeEEecCCccCCC
Confidence 35566899999999999987654 699999998866544
No 270
>PF02240 MCR_gamma: Methyl-coenzyme M reductase gamma subunit; InterPro: IPR003178 Methyl-coenzyme M reductase (MCR) catalyses the reduction of methyl-coenzyme M (CH3-SCoM) and coenzyme B (HS-CoB) to methane and the corresponding heterosulphide CoM-S-S-CoB (2.8.4.1 from EC), the final step in methane biosynthesis. This reaction proceeds under anaerobic conditions by methanogenic Archaea [], and requires a nickel-porphinoid prosthetic group, coenzyme F430, which is in the EPR-detectable Ni(I) oxidation state in the active enzyme. Studies on a catalytically inactive enzyme aerobically co-crystallized with coenzyme M displayed a fully occupied coenzyme M-binding site with no alternate conformations. The binding of coenzyme M appears to induce specific conformational changes that suggests a molecular mechanism by which the enzyme ensures that methyl-coenzyme M enters the substrate channel prior to coenzyme B, as required by the active-site geometry []. MCR is a hexamer composed of 2 alpha, 2 beta, and 2 gamma subunits with two identical nickel porphinoid active sites, which form two long active site channels with F430 embedded at the bottom [, ]. This entry represents the gamma subunit, which has a complex alpha-helical/beta-sheet topology.; GO: 0050524 coenzyme-B sulfoethylthiotransferase activity, 0015948 methanogenesis; PDB: 1MRO_C 3M32_C 3POT_F 1HBU_F 3M2U_C 3M2V_C 3M2R_F 1HBM_C 3M1V_C 1HBO_C ....
Probab=57.33 E-value=4.1 Score=31.20 Aligned_cols=13 Identities=31% Similarity=0.496 Sum_probs=7.2
Q ss_pred cccccCCCCccc-cc
Q 018375 342 YLCGLKGRRMFH-HS 355 (357)
Q Consensus 342 ~~~~~~~~~~~~-~~ 355 (357)
-+||++ |+|+| ||
T Consensus 145 A~~g~R-GaTVHGHS 158 (247)
T PF02240_consen 145 ARTGIR-GATVHGHS 158 (247)
T ss_dssp TTEEE--SS----TT
T ss_pred hhcccc-cceeccce
Confidence 368999 88888 98
No 271
>PLN02748 tRNA dimethylallyltransferase
Probab=56.49 E-value=77 Score=28.66 Aligned_cols=78 Identities=14% Similarity=0.145 Sum_probs=46.3
Q ss_pred CceEEEEEccCCccccccHHHHHHHHhhC-CcEEEEeC----CCCC--ccCC----------------CCCccccchhhH
Q 018375 41 PKAVVFLCHGYGMECSGFMRECGTRLASA-GYAVFGID----YEGH--GRSR----------------GARCYIKKFENI 97 (357)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~l~~~-G~~vi~~d----~~G~--G~s~----------------~~~~~~~~~~~~ 97 (357)
.++.||++-|-.++.. ..++..|+.. +..||..| |+|. |... ..+...++..++
T Consensus 20 ~~~~~i~i~GptgsGK---s~la~~la~~~~~eii~~DsmQVYrgLdIgTaKpt~eE~~~VpHHLid~v~p~e~ysv~~F 96 (468)
T PLN02748 20 GKAKVVVVMGPTGSGK---SKLAVDLASHFPVEIINADSMQVYSGLDVLTNKVPLHEQKGVPHHLLGVISPSVEFTAKDF 96 (468)
T ss_pred CCCCEEEEECCCCCCH---HHHHHHHHHhcCeeEEcCchheeeCCcchhcCCCCHHHHcCCCCeeEeecCCCCcCcHHHH
Confidence 3445777777665543 3455556555 56788888 3332 1111 112234578889
Q ss_pred HHHHHHHHHHHHhhhccCCccEEEEEeC
Q 018375 98 VNDCDDFFKSVCAQEEYTDKARFLYGES 125 (357)
Q Consensus 98 ~~d~~~~l~~l~~~~~~~~~~v~lvG~S 125 (357)
.++...+|+.+..+ ....+|||-|
T Consensus 97 ~~~A~~~I~~I~~r----gk~PIlVGGT 120 (468)
T PLN02748 97 RDHAVPLIEEILSR----NGLPVIVGGT 120 (468)
T ss_pred HHHHHHHHHHHHhc----CCCeEEEcCh
Confidence 99999999998653 3445666643
No 272
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=56.43 E-value=13 Score=29.65 Aligned_cols=35 Identities=17% Similarity=0.313 Sum_probs=26.0
Q ss_pred eEEEEEccCCccccccHHHHHHHHhhCCcEEEEeC
Q 018375 43 AVVFLCHGYGMECSGFMRECGTRLASAGYAVFGID 77 (357)
Q Consensus 43 p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d 77 (357)
..||++|............++..|.++||.++.++
T Consensus 187 g~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 187 GAILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 45999997533323345789999999999998875
No 273
>PRK10279 hypothetical protein; Provisional
Probab=55.71 E-value=17 Score=30.48 Aligned_cols=24 Identities=17% Similarity=0.091 Sum_probs=20.6
Q ss_pred CCccEEEEEeChhHHHHHHHHhcC
Q 018375 115 TDKARFLYGESMGGAVTLLLHKKD 138 (357)
Q Consensus 115 ~~~~v~lvG~S~Gg~~a~~~a~~~ 138 (357)
+...-.++|.|+|+.++..+|...
T Consensus 31 gi~~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 31 GIEIDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred CCCcCEEEEEcHHHHHHHHHHcCC
Confidence 566778999999999999998754
No 274
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=55.26 E-value=23 Score=28.15 Aligned_cols=24 Identities=21% Similarity=0.099 Sum_probs=19.6
Q ss_pred CCccEEEEEeChhHHHHHHHHhcC
Q 018375 115 TDKARFLYGESMGGAVTLLLHKKD 138 (357)
Q Consensus 115 ~~~~v~lvG~S~Gg~~a~~~a~~~ 138 (357)
+...-.++|.|.|+.+|..++...
T Consensus 26 gi~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 26 GLEPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred CCCceEEEEeCHHHHHHHHHHcCC
Confidence 345567999999999999998654
No 275
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=54.61 E-value=19 Score=29.54 Aligned_cols=40 Identities=10% Similarity=0.199 Sum_probs=31.3
Q ss_pred CCceEEEEEccCCcccc-ccHHHHHHHHhhCCcEEEEeCCC
Q 018375 40 TPKAVVFLCHGYGMECS-GFMRECGTRLASAGYAVFGIDYE 79 (357)
Q Consensus 40 ~~~p~vv~lHG~~~~~~-~~~~~~~~~l~~~G~~vi~~d~~ 79 (357)
...|+||++.|+-++.. .-...+...|..+|++|+++.-|
T Consensus 53 ~~~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~P 93 (264)
T TIGR03709 53 GRRSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAP 93 (264)
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCC
Confidence 35699999999966543 33477888888999999999655
No 276
>cd03145 GAT1_cyanophycinase Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. This group contains proteins similar to the extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Cyanophycinase is believed to be a serine-type exopeptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow.
Probab=53.34 E-value=69 Score=25.41 Aligned_cols=39 Identities=13% Similarity=-0.002 Sum_probs=25.1
Q ss_pred CceEEEEEccCCccccccHHHHHHHHhhCCcE-EEEeCCC
Q 018375 41 PKAVVFLCHGYGMECSGFMRECGTRLASAGYA-VFGIDYE 79 (357)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~-vi~~d~~ 79 (357)
..+.|++++-.+.....+.+.+.+.|.+.|+. +..++..
T Consensus 28 ~~~~i~~iptA~~~~~~~~~~~~~~~~~lG~~~v~~~~~~ 67 (217)
T cd03145 28 AGARIVVIPAASEEPAEVGEEYRDVFERLGAREVEVLVID 67 (217)
T ss_pred CCCcEEEEeCCCcChhHHHHHHHHHHHHcCCceeEEeccC
Confidence 45567777766555455556777788777874 5556554
No 277
>cd00539 MCR_gamma Methyl-coenzyme M reductase (MCR) gamma subunit. MCR catalyzes the terminal step of methane formation in the energy metabolism of all methanogenic archaea, in which methyl-coenzyme M and coenzyme B are converted to methane and the heterodisulfide of coenzyme M and coenzyme B (CoM-S-S-CoB). MCR is a dimer of trimers, each of which consists of one alpha, one beta, and one gamma subunit, with two identical active sites containing nickel porphinoid factor 430 (F430).
Probab=53.20 E-value=5.5 Score=30.51 Aligned_cols=13 Identities=31% Similarity=0.470 Sum_probs=10.5
Q ss_pred cccccCCCCccc-cc
Q 018375 342 YLCGLKGRRMFH-HS 355 (357)
Q Consensus 342 ~~~~~~~~~~~~-~~ 355 (357)
-.||++ |+|+| ||
T Consensus 144 ArtGiR-GaTVHGHs 157 (246)
T cd00539 144 ARTGVR-GATVHGHS 157 (246)
T ss_pred hhcccc-ccceecce
Confidence 358999 88888 98
No 278
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=53.16 E-value=21 Score=30.10 Aligned_cols=24 Identities=21% Similarity=0.140 Sum_probs=21.1
Q ss_pred CCccEEEEEeChhHHHHHHHHhcC
Q 018375 115 TDKARFLYGESMGGAVTLLLHKKD 138 (357)
Q Consensus 115 ~~~~v~lvG~S~Gg~~a~~~a~~~ 138 (357)
+...-.|.|-|+|+.++..+|...
T Consensus 37 gi~~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 37 GIPIDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred CCCccEEEecCHHHHHHHHHHcCC
Confidence 577889999999999999999754
No 279
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=53.13 E-value=23 Score=29.18 Aligned_cols=24 Identities=21% Similarity=0.148 Sum_probs=20.1
Q ss_pred CCccEEEEEeChhHHHHHHHHhcC
Q 018375 115 TDKARFLYGESMGGAVTLLLHKKD 138 (357)
Q Consensus 115 ~~~~v~lvG~S~Gg~~a~~~a~~~ 138 (357)
+...-.++|.|+|+.++..+|...
T Consensus 36 gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 36 GIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred CCCccEEEEECHHHHHHHHHHcCC
Confidence 455667999999999999999764
No 280
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=52.94 E-value=25 Score=26.20 Aligned_cols=37 Identities=24% Similarity=0.271 Sum_probs=26.4
Q ss_pred ceEEEEEccCCccccc-cHHHHHHHHhhCCcEEEEeCC
Q 018375 42 KAVVFLCHGYGMECSG-FMRECGTRLASAGYAVFGIDY 78 (357)
Q Consensus 42 ~p~vv~lHG~~~~~~~-~~~~~~~~l~~~G~~vi~~d~ 78 (357)
+|.||++-|..++... .-..+.+.|.+.|+.|+.+|-
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDg 38 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDG 38 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecC
Confidence 4679999999877542 235667778888999999984
No 281
>TIGR03259 met_CoM_red_gam methyl-coenzyme M reductase, gamma subunit. Members of this protein family are the gamma subunit of methyl coenzyme M reductase, also called coenzyme-B sulfoethylthiotransferase (EC 2.8.4.1). This enzyme, with alpha, beta, and gamma subunits, catalyzes the last step in methanogenesis. Several methanogens have encode two such enzymes, designated I and II; this model does not separate the isozymes.
Probab=52.67 E-value=5.7 Score=30.40 Aligned_cols=13 Identities=31% Similarity=0.493 Sum_probs=10.5
Q ss_pred cccccCCCCccc-cc
Q 018375 342 YLCGLKGRRMFH-HS 355 (357)
Q Consensus 342 ~~~~~~~~~~~~-~~ 355 (357)
-.||++ |+|+| ||
T Consensus 144 ArtGiR-GaTVHGHs 157 (244)
T TIGR03259 144 ATTGVR-GATVHGHS 157 (244)
T ss_pred hhcccc-ccceecce
Confidence 358999 88888 98
No 282
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=51.82 E-value=74 Score=28.22 Aligned_cols=70 Identities=17% Similarity=0.227 Sum_probs=47.5
Q ss_pred HHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCc--
Q 018375 64 TRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSF-- 141 (357)
Q Consensus 64 ~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~-- 141 (357)
+.+...+|.|+.+|-.|.=. --+++.+++.++-+.+ .+..+.+|--++=|.-|...|..+.+.
T Consensus 176 ~~ak~~~~DvvIvDTAGRl~---------ide~Lm~El~~Ik~~~------~P~E~llVvDam~GQdA~~~A~aF~e~l~ 240 (451)
T COG0541 176 EKAKEEGYDVVIVDTAGRLH---------IDEELMDELKEIKEVI------NPDETLLVVDAMIGQDAVNTAKAFNEALG 240 (451)
T ss_pred HHHHHcCCCEEEEeCCCccc---------ccHHHHHHHHHHHhhc------CCCeEEEEEecccchHHHHHHHHHhhhcC
Confidence 34445567777777665311 1244556666665555 678899999999999999998766553
Q ss_pred ccEEEEe
Q 018375 142 WNGAVLV 148 (357)
Q Consensus 142 v~~~vl~ 148 (357)
+.++|+.
T Consensus 241 itGvIlT 247 (451)
T COG0541 241 ITGVILT 247 (451)
T ss_pred CceEEEE
Confidence 7888875
No 283
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=51.04 E-value=20 Score=29.96 Aligned_cols=23 Identities=13% Similarity=0.173 Sum_probs=19.0
Q ss_pred CCccEEEEEeChhHHHHHHHHhc
Q 018375 115 TDKARFLYGESMGGAVTLLLHKK 137 (357)
Q Consensus 115 ~~~~v~lvG~S~Gg~~a~~~a~~ 137 (357)
+..+-.++|||+|-+.|+.++..
T Consensus 80 Gi~p~~~~GhSlGE~aA~~~ag~ 102 (298)
T smart00827 80 GVRPDAVVGHSLGEIAAAYVAGV 102 (298)
T ss_pred CCcccEEEecCHHHHHHHHHhCC
Confidence 56788999999999988877643
No 284
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=51.00 E-value=13 Score=31.48 Aligned_cols=23 Identities=22% Similarity=0.229 Sum_probs=19.2
Q ss_pred CCccEEEEEeChhHHHHHHHHhc
Q 018375 115 TDKARFLYGESMGGAVTLLLHKK 137 (357)
Q Consensus 115 ~~~~v~lvG~S~Gg~~a~~~a~~ 137 (357)
+..+-.++|||+|=+.|+.++..
T Consensus 82 Gi~P~~v~GhSlGE~aA~~aaG~ 104 (318)
T PF00698_consen 82 GIKPDAVIGHSLGEYAALVAAGA 104 (318)
T ss_dssp THCESEEEESTTHHHHHHHHTTS
T ss_pred ccccceeeccchhhHHHHHHCCc
Confidence 57888999999999988877643
No 285
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=50.78 E-value=21 Score=29.89 Aligned_cols=23 Identities=13% Similarity=0.131 Sum_probs=19.2
Q ss_pred CCccEEEEEeChhHHHHHHHHhc
Q 018375 115 TDKARFLYGESMGGAVTLLLHKK 137 (357)
Q Consensus 115 ~~~~v~lvG~S~Gg~~a~~~a~~ 137 (357)
+..+..++|||+|=+.|+.++..
T Consensus 74 g~~P~~v~GhS~GE~aAa~~aG~ 96 (295)
T TIGR03131 74 LPRPSAVAGYSVGEYAAAVVAGV 96 (295)
T ss_pred CCCCcEEeecCHHHHHHHHHhCC
Confidence 56888999999999988887643
No 286
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=50.75 E-value=15 Score=32.50 Aligned_cols=36 Identities=19% Similarity=0.258 Sum_probs=25.5
Q ss_pred HHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCc
Q 018375 103 DFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSF 141 (357)
Q Consensus 103 ~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~ 141 (357)
.+++.+.++ +..+-++.|.|.|+.+|..++...++.
T Consensus 90 GVLkaL~E~---gl~p~vIsGTSaGAivAal~as~~~ee 125 (421)
T cd07230 90 GVLKALFEA---NLLPRIISGSSAGSIVAAILCTHTDEE 125 (421)
T ss_pred HHHHHHHHc---CCCCCEEEEECHHHHHHHHHHcCCHHH
Confidence 344444332 455568999999999999999865544
No 287
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=50.62 E-value=31 Score=26.13 Aligned_cols=25 Identities=20% Similarity=0.203 Sum_probs=20.3
Q ss_pred CCccEEEEEeChhHHHHHHHHhcCC
Q 018375 115 TDKARFLYGESMGGAVTLLLHKKDP 139 (357)
Q Consensus 115 ~~~~v~lvG~S~Gg~~a~~~a~~~p 139 (357)
+...-.++|.|.|+.+|..++...+
T Consensus 26 g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 26 GIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred CCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 3456679999999999999987654
No 288
>PRK14729 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Provisional
Probab=50.28 E-value=1.3e+02 Score=25.29 Aligned_cols=74 Identities=9% Similarity=0.081 Sum_probs=45.1
Q ss_pred EEEEccCCccccccHHHHHHHHhhCCcEEEEeCC----CCC--ccCCC----------------CCccccchhhHHHHHH
Q 018375 45 VFLCHGYGMECSGFMRECGTRLASAGYAVFGIDY----EGH--GRSRG----------------ARCYIKKFENIVNDCD 102 (357)
Q Consensus 45 vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~----~G~--G~s~~----------------~~~~~~~~~~~~~d~~ 102 (357)
||++-|-.++.. ..++-.|++++-.+|..|- +|. |...+ .+...++..++.++..
T Consensus 6 ii~I~GpTasGK---S~LAl~LA~~~~eIIsaDS~QvYr~ldIgTaKpt~eE~~~i~Hhlid~~~p~e~~sv~~f~~~a~ 82 (300)
T PRK14729 6 IVFIFGPTAVGK---SNILFHFPKGKAEIINVDSIQVYKEFDIASCKPSKELRKHIKHHLVDFLEPIKEYNLGIFYKEAL 82 (300)
T ss_pred EEEEECCCccCH---HHHHHHHHHhCCcEEeccHHHHHCCCceecCCCCHHHHcCCCeeeeeccCCCCceeHHHHHHHHH
Confidence 677777666543 3455666666557888884 332 11111 1223457888899999
Q ss_pred HHHHHHHhhhccCCccEEEEEeC
Q 018375 103 DFFKSVCAQEEYTDKARFLYGES 125 (357)
Q Consensus 103 ~~l~~l~~~~~~~~~~v~lvG~S 125 (357)
.+++.+..+ ....+|+|-|
T Consensus 83 ~~i~~i~~~----gk~PilvGGT 101 (300)
T PRK14729 83 KIIKELRQQ----KKIPIFVGGS 101 (300)
T ss_pred HHHHHHHHC----CCCEEEEeCc
Confidence 999988553 3445666643
No 289
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=50.19 E-value=73 Score=27.93 Aligned_cols=106 Identities=22% Similarity=0.248 Sum_probs=57.7
Q ss_pred CCCCCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCC----cc-ccchhhHHHHHHHHHHHHHhh
Q 018375 37 PFSTPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGAR----CY-IKKFENIVNDCDDFFKSVCAQ 111 (357)
Q Consensus 37 p~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~----~~-~~~~~~~~~d~~~~l~~l~~~ 111 (357)
|.+.....|+++--..+....- ...++.+...|+-|+-+|..++=..-... .+ ...++.+.+++......-
T Consensus 43 p~g~~~~~villSd~~G~~d~~-~s~a~al~~~~Alv~~vd~~~ylaaL~~dd~ecvylisd~Ealsr~~Qr~a~~g--- 118 (456)
T COG3946 43 PDGDPQGLVILLSDEAGIGDQE-RSRADALLARGALVAPVDLGAYLAALGADDNECVYLISDFEALSREAQRAADLG--- 118 (456)
T ss_pred ccCCcceeeEEEEcccChhhhh-cchhHHHhhcCCeeeccccchhhhccccCCCcceEEehhHHHHhHHHHHHhhcc---
Confidence 4334444455554322222222 35567788888999999988763322211 11 123344444433332221
Q ss_pred hccCCccEEEEEeChhHHHHHHHHhcCCCc-ccEEEEec
Q 018375 112 EEYTDKARFLYGESMGGAVTLLLHKKDPSF-WNGAVLVA 149 (357)
Q Consensus 112 ~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~-v~~~vl~~ 149 (357)
....-+|.|---||.+++..+++-|+. +.+.+...
T Consensus 119 ---~yr~PVl~g~g~Gg~~A~asaaqSp~atlag~Vsld 154 (456)
T COG3946 119 ---VYRLPVLTGPGQGGTLAYASAAQSPDATLAGAVSLD 154 (456)
T ss_pred ---CcccceEeecCCCcHHHHHHHhhChhhhhcCccCCC
Confidence 234567888999999999998877653 34444333
No 290
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=50.01 E-value=2.6 Score=34.89 Aligned_cols=109 Identities=17% Similarity=0.057 Sum_probs=60.8
Q ss_pred CceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEE
Q 018375 41 PKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARF 120 (357)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~ 120 (357)
....++..||...+...........+...++.++..|+++++.+....... .+.....++..++..... .....++.
T Consensus 87 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~--~~~~~~~~ 163 (299)
T COG1073 87 FGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYRLLGASLGPRILA-GLSLGGPSAGALLAWGPT--RLDASRIV 163 (299)
T ss_pred ccccccccccccCccccccccchhheeeeccccccHHHHHHhhhcCcceEE-EEEeeccchHHHhhcchh--HHHhhccc
Confidence 344577888875543333223334445557899999999999986443211 111111222222222210 00346899
Q ss_pred EEEeChhHHHHHHHHhc----CCCcccEEEEecccc
Q 018375 121 LYGESMGGAVTLLLHKK----DPSFWNGAVLVAPMC 152 (357)
Q Consensus 121 lvG~S~Gg~~a~~~a~~----~p~~v~~~vl~~~~~ 152 (357)
++|.|+||..++..... .++.+..++.-++..
T Consensus 164 ~~g~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (299)
T COG1073 164 VWGESLGGALALLLLGANPELARELIDYLITPGGFA 199 (299)
T ss_pred ceeeccCceeeccccccchHHHHhhhhhhccCCCCC
Confidence 99999999999887654 234455555444443
No 291
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=49.71 E-value=47 Score=26.16 Aligned_cols=58 Identities=21% Similarity=0.291 Sum_probs=34.7
Q ss_pred ceEEEEEccCCcccc--ccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHH
Q 018375 42 KAVVFLCHGYGMECS--GFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKS 107 (357)
Q Consensus 42 ~p~vv~lHG~~~~~~--~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~ 107 (357)
..+|+++||-....- .+.....+.|.+.|..|-...++|.|.+ ...+..+|+.++|+.
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~--------i~~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHE--------ISPEELRDLREFLEK 214 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS----------HHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCC--------CCHHHHHHHHHHHhh
Confidence 456999999766532 2346677888888887777777765544 234555666666654
No 292
>PRK14974 cell division protein FtsY; Provisional
Probab=49.38 E-value=1.1e+02 Score=26.22 Aligned_cols=66 Identities=15% Similarity=0.245 Sum_probs=38.2
Q ss_pred hCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCC--CcccEE
Q 018375 68 SAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDP--SFWNGA 145 (357)
Q Consensus 68 ~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p--~~v~~~ 145 (357)
..|+.++.+|-.|.... -....+.+..+.+.+ ....+++|.-+.-|.-+...+..+. -.+.++
T Consensus 220 ~~~~DvVLIDTaGr~~~---------~~~lm~eL~~i~~~~------~pd~~iLVl~a~~g~d~~~~a~~f~~~~~~~gi 284 (336)
T PRK14974 220 ARGIDVVLIDTAGRMHT---------DANLMDELKKIVRVT------KPDLVIFVGDALAGNDAVEQAREFNEAVGIDGV 284 (336)
T ss_pred hCCCCEEEEECCCccCC---------cHHHHHHHHHHHHhh------CCceEEEeeccccchhHHHHHHHHHhcCCCCEE
Confidence 45788888888876432 234455555555544 3455667776666665555554332 236666
Q ss_pred EEe
Q 018375 146 VLV 148 (357)
Q Consensus 146 vl~ 148 (357)
|+.
T Consensus 285 IlT 287 (336)
T PRK14974 285 ILT 287 (336)
T ss_pred EEe
Confidence 653
No 293
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=49.36 E-value=56 Score=25.55 Aligned_cols=43 Identities=23% Similarity=0.151 Sum_probs=28.0
Q ss_pred CceEEEEEccCCcccccc--HHHHHHHHhhCCcEEEEeCCCCCcc
Q 018375 41 PKAVVFLCHGYGMECSGF--MRECGTRLASAGYAVFGIDYEGHGR 83 (357)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~--~~~~~~~l~~~G~~vi~~d~~G~G~ 83 (357)
..++++++||.....-.. -..+...|.+.|..+...-+++.|.
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH 187 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGH 187 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SS
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCC
Confidence 467899999976542222 2467788888887666666665444
No 294
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=49.16 E-value=25 Score=28.13 Aligned_cols=72 Identities=14% Similarity=0.160 Sum_probs=46.1
Q ss_pred CCceEEEEEccCCcccc-ccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHH-HHHHHHHHHhhhccCCc
Q 018375 40 TPKAVVFLCHGYGMECS-GFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVND-CDDFFKSVCAQEEYTDK 117 (357)
Q Consensus 40 ~~~p~vv~lHG~~~~~~-~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d-~~~~l~~l~~~~~~~~~ 117 (357)
.+.|+||++.|+.++.. .-...+...|..+|+.|.++.-|.- ++...+ +..+-..+- ..+
T Consensus 28 ~~~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~pt~-------------eE~~~p~lwRfw~~lP-----~~G 89 (230)
T TIGR03707 28 TGARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKPSD-------------RERTQWYFQRYVQHLP-----AAG 89 (230)
T ss_pred cCCCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCCCH-------------HHHcChHHHHHHHhCC-----CCC
Confidence 34689999999966543 3347788888889999999876632 222222 333444441 356
Q ss_pred cEEEEEeChhHH
Q 018375 118 ARFLYGESMGGA 129 (357)
Q Consensus 118 ~v~lvG~S~Gg~ 129 (357)
.+.|+=-|+=+-
T Consensus 90 ~i~IF~rSwY~~ 101 (230)
T TIGR03707 90 EIVLFDRSWYNR 101 (230)
T ss_pred eEEEEeCchhhh
Confidence 788877776544
No 295
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=48.88 E-value=59 Score=25.30 Aligned_cols=72 Identities=15% Similarity=0.178 Sum_probs=43.1
Q ss_pred HHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcC-C-
Q 018375 62 CGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKD-P- 139 (357)
Q Consensus 62 ~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~-p- 139 (357)
..+.+..+++.++.+|-+|... .-.+..+++..+++.+ ....+++|=-+..+.-.+..+..+ .
T Consensus 75 ~l~~~~~~~~D~vlIDT~Gr~~---------~d~~~~~el~~~~~~~------~~~~~~LVlsa~~~~~~~~~~~~~~~~ 139 (196)
T PF00448_consen 75 ALEKFRKKGYDLVLIDTAGRSP---------RDEELLEELKKLLEAL------NPDEVHLVLSATMGQEDLEQALAFYEA 139 (196)
T ss_dssp HHHHHHHTTSSEEEEEE-SSSS---------THHHHHHHHHHHHHHH------SSSEEEEEEEGGGGGHHHHHHHHHHHH
T ss_pred HHHHHhhcCCCEEEEecCCcch---------hhHHHHHHHHHHhhhc------CCccceEEEecccChHHHHHHHHHhhc
Confidence 3445556789999999988642 2244566777777776 455666665555555555444322 1
Q ss_pred CcccEEEEe
Q 018375 140 SFWNGAVLV 148 (357)
Q Consensus 140 ~~v~~~vl~ 148 (357)
-.++++|+-
T Consensus 140 ~~~~~lIlT 148 (196)
T PF00448_consen 140 FGIDGLILT 148 (196)
T ss_dssp SSTCEEEEE
T ss_pred ccCceEEEE
Confidence 236787763
No 296
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=48.88 E-value=29 Score=27.46 Aligned_cols=25 Identities=24% Similarity=0.365 Sum_probs=20.8
Q ss_pred CCccEEEEEeChhHHHHHHHHhcCC
Q 018375 115 TDKARFLYGESMGGAVTLLLHKKDP 139 (357)
Q Consensus 115 ~~~~v~lvG~S~Gg~~a~~~a~~~p 139 (357)
+...-.++|.|.|+.+|..++...+
T Consensus 24 g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 24 GIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred CCCCCEEEEECHHHHHHHHHHcCCc
Confidence 3456689999999999999998764
No 297
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=47.69 E-value=73 Score=27.11 Aligned_cols=57 Identities=18% Similarity=0.107 Sum_probs=34.3
Q ss_pred EEecCCcEEEEEEEcC---CCCCceEEEEEccCCccccccHHHHHHHHhhC--CcEEEEeCCCC
Q 018375 22 IRNARGVQLFTCRWLP---FSTPKAVVFLCHGYGMECSGFMRECGTRLASA--GYAVFGIDYEG 80 (357)
Q Consensus 22 ~~~~~g~~l~~~~~~p---~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~--G~~vi~~d~~G 80 (357)
|.+..+-.++|....| .+..+++=+|+||.|..... ..+.+++.++ +..|+.+|--+
T Consensus 188 f~np~Np~~hy~ttg~EI~~q~~g~vDi~V~gaGTGGTi--tgvGRylke~~~~~kVv~vdp~~ 249 (362)
T KOG1252|consen 188 FHNPGNPLAHYETTGPEIWRQLDGKVDIFVAGAGTGGTI--TGVGRYLKEQNPNIKVVGVDPQE 249 (362)
T ss_pred hcCCCCcccccccccHHHHHHhcCCCCEEEeccCCCcee--echhHHHHHhCCCCEEEEeCCCc
Confidence 4455556677777666 22234456788887654332 4556666655 47788888654
No 298
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=46.26 E-value=19 Score=27.82 Aligned_cols=34 Identities=18% Similarity=0.239 Sum_probs=23.2
Q ss_pred EEEEEccCC--ccccccHHHHHHHHhhCCcEEEEeC
Q 018375 44 VVFLCHGYG--MECSGFMRECGTRLASAGYAVFGID 77 (357)
Q Consensus 44 ~vv~lHG~~--~~~~~~~~~~~~~l~~~G~~vi~~d 77 (357)
.||++|... .........++..|.++||.++.++
T Consensus 153 ~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 153 DIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 499999421 1111234778889999999998874
No 299
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=45.63 E-value=42 Score=25.37 Aligned_cols=23 Identities=22% Similarity=0.143 Sum_probs=18.9
Q ss_pred CccEEEEEeChhHHHHHHHHhcC
Q 018375 116 DKARFLYGESMGGAVTLLLHKKD 138 (357)
Q Consensus 116 ~~~v~lvG~S~Gg~~a~~~a~~~ 138 (357)
...-.++|.|.|+.+|..++...
T Consensus 27 ~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 27 IPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred CCeeEEEEECHHHHHHHHHHcCC
Confidence 44568999999999999998653
No 300
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=45.36 E-value=39 Score=27.75 Aligned_cols=23 Identities=13% Similarity=0.078 Sum_probs=19.2
Q ss_pred cEEEEEeChhHHHHHHHHhcCCC
Q 018375 118 ARFLYGESMGGAVTLLLHKKDPS 140 (357)
Q Consensus 118 ~v~lvG~S~Gg~~a~~~a~~~p~ 140 (357)
.=.++|.|.|+.++..++...+.
T Consensus 28 fd~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 28 FDLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred CCEEEEECHHHHhHHHHHhCCcc
Confidence 44799999999999999876554
No 301
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=44.53 E-value=52 Score=27.23 Aligned_cols=81 Identities=21% Similarity=0.182 Sum_probs=44.3
Q ss_pred EEEEccCCccccccHHHHHHHHhhCCc-------EEEEeCCCCCccCCCCCccccchhhHH--------HHHHHHHHHHH
Q 018375 45 VFLCHGYGMECSGFMRECGTRLASAGY-------AVFGIDYEGHGRSRGARCYIKKFENIV--------NDCDDFFKSVC 109 (357)
Q Consensus 45 vv~lHG~~~~~~~~~~~~~~~l~~~G~-------~vi~~d~~G~G~s~~~~~~~~~~~~~~--------~d~~~~l~~l~ 109 (357)
-|++.|.|...-..-+.+...+.+.|. +++.+|..|-=..+...-. ..-..++ .++.++++.+
T Consensus 27 ~iv~~GAGsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~-~~~~~~a~~~~~~~~~~L~e~i~~v- 104 (279)
T cd05312 27 RILFLGAGSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLT-PFKKPFARKDEEKEGKSLLEVVKAV- 104 (279)
T ss_pred EEEEECcCHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcch-HHHHHHHhhcCcccCCCHHHHHHhc-
Confidence 345556554433333556666666677 8999999985333322100 0111122 2455555544
Q ss_pred hhhccCCccEEEEEeCh-hHHHHHHH
Q 018375 110 AQEEYTDKARFLYGESM-GGAVTLLL 134 (357)
Q Consensus 110 ~~~~~~~~~v~lvG~S~-Gg~~a~~~ 134 (357)
++-+|+|-|- ||.+.-.+
T Consensus 105 -------~ptvlIG~S~~~g~ft~ev 123 (279)
T cd05312 105 -------KPTVLIGLSGVGGAFTEEV 123 (279)
T ss_pred -------CCCEEEEeCCCCCCCCHHH
Confidence 6679999995 66554433
No 302
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=44.26 E-value=24 Score=31.16 Aligned_cols=37 Identities=19% Similarity=0.165 Sum_probs=26.3
Q ss_pred HHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcc
Q 018375 103 DFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFW 142 (357)
Q Consensus 103 ~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v 142 (357)
.+++.+.++ +..+-+++|.|.|+.+|..++...++.+
T Consensus 84 GVlkaL~e~---gllp~iI~GtSAGAivaalla~~t~~el 120 (407)
T cd07232 84 GVVKALLDA---DLLPNVISGTSGGSLVAALLCTRTDEEL 120 (407)
T ss_pred HHHHHHHhC---CCCCCEEEEECHHHHHHHHHHcCCHHHH
Confidence 344444333 4566689999999999999998655444
No 303
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=44.25 E-value=52 Score=22.78 Aligned_cols=31 Identities=23% Similarity=0.313 Sum_probs=23.2
Q ss_pred EEEEccCCccccccHHHHHHHHhhC-CcEEEEeCC
Q 018375 45 VFLCHGYGMECSGFMRECGTRLASA-GYAVFGIDY 78 (357)
Q Consensus 45 vv~lHG~~~~~~~~~~~~~~~l~~~-G~~vi~~d~ 78 (357)
||++.|.+++.. ..+++.|++. |+.++..|-
T Consensus 1 vI~I~G~~gsGK---ST~a~~La~~~~~~~i~~d~ 32 (121)
T PF13207_consen 1 VIIISGPPGSGK---STLAKELAERLGFPVISMDD 32 (121)
T ss_dssp EEEEEESTTSSH---HHHHHHHHHHHTCEEEEEHH
T ss_pred CEEEECCCCCCH---HHHHHHHHHHHCCeEEEecc
Confidence 578888877754 3566777776 899988887
No 304
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=43.79 E-value=29 Score=28.85 Aligned_cols=23 Identities=26% Similarity=0.238 Sum_probs=19.2
Q ss_pred CccEEEEEeChhHHHHHHHHhcC
Q 018375 116 DKARFLYGESMGGAVTLLLHKKD 138 (357)
Q Consensus 116 ~~~v~lvG~S~Gg~~a~~~a~~~ 138 (357)
..+..++|||+|=+.|+.++...
T Consensus 82 i~p~~v~GhS~GE~aAa~~aG~l 104 (290)
T TIGR00128 82 LKPDFAAGHSLGEYSALVAAGAL 104 (290)
T ss_pred CCCCEEeecCHHHHHHHHHhCCC
Confidence 67889999999999888887543
No 305
>PRK10867 signal recognition particle protein; Provisional
Probab=43.76 E-value=2.1e+02 Score=25.75 Aligned_cols=68 Identities=19% Similarity=0.210 Sum_probs=37.5
Q ss_pred HHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCC--cc
Q 018375 65 RLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPS--FW 142 (357)
Q Consensus 65 ~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~--~v 142 (357)
.....+|.++.+|-+|.... -+...+.+..+.+.+ ....+++|--++-|.-+...+..+.+ .+
T Consensus 178 ~a~~~~~DvVIIDTaGrl~~---------d~~lm~eL~~i~~~v------~p~evllVlda~~gq~av~~a~~F~~~~~i 242 (433)
T PRK10867 178 EAKENGYDVVIVDTAGRLHI---------DEELMDELKAIKAAV------NPDEILLVVDAMTGQDAVNTAKAFNEALGL 242 (433)
T ss_pred HHHhcCCCEEEEeCCCCccc---------CHHHHHHHHHHHHhh------CCCeEEEEEecccHHHHHHHHHHHHhhCCC
Confidence 34455799999999986432 123344444444444 34455666556555555555543322 25
Q ss_pred cEEEE
Q 018375 143 NGAVL 147 (357)
Q Consensus 143 ~~~vl 147 (357)
.++|+
T Consensus 243 ~giIl 247 (433)
T PRK10867 243 TGVIL 247 (433)
T ss_pred CEEEE
Confidence 66666
No 306
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=43.54 E-value=41 Score=27.03 Aligned_cols=22 Identities=18% Similarity=0.045 Sum_probs=18.7
Q ss_pred cEEEEEeChhHHHHHHHHhcCC
Q 018375 118 ARFLYGESMGGAVTLLLHKKDP 139 (357)
Q Consensus 118 ~v~lvG~S~Gg~~a~~~a~~~p 139 (357)
...++|-|.|+.++..++...+
T Consensus 30 ~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 30 TTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred CCEEEEEcHHHHHHHHHHcCCC
Confidence 4579999999999999987654
No 307
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=43.29 E-value=2.1e+02 Score=25.27 Aligned_cols=60 Identities=22% Similarity=0.230 Sum_probs=30.9
Q ss_pred HHHHHHHhhCCcEEEEeCCCCC--ccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEe
Q 018375 60 RECGTRLASAGYAVFGIDYEGH--GRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGE 124 (357)
Q Consensus 60 ~~~~~~l~~~G~~vi~~d~~G~--G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~ 124 (357)
..-...|.+.|+.|+-+..--+ |+... +...++++.++.+...+..- ......++.+.|-
T Consensus 132 ~~Nl~~L~~~G~~vv~P~~g~~ac~~~g~--g~~~~~~~i~~~v~~~~~~~---~~~~~~~vlit~g 193 (390)
T TIGR00521 132 QENIKRLKDDGYIFIEPDSGLLACGDEGK--GRLAEPETIVKAAEREFSPK---EDLEGKRVLITAG 193 (390)
T ss_pred HHHHHHHHHCCcEEECCCCcccccccccC--CCCCCHHHHHHHHHHHHhhc---cccCCceEEEecC
Confidence 3445677777887766653222 33221 11235666666655555331 1124566777666
No 308
>PRK00091 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed
Probab=43.07 E-value=1.4e+02 Score=25.24 Aligned_cols=73 Identities=15% Similarity=0.113 Sum_probs=39.3
Q ss_pred eEEEEEccCCccccccHHHHHHHHhhC-CcEEEEeCCC----C--CccCCC----------------CCccccchhhHHH
Q 018375 43 AVVFLCHGYGMECSGFMRECGTRLASA-GYAVFGIDYE----G--HGRSRG----------------ARCYIKKFENIVN 99 (357)
Q Consensus 43 p~vv~lHG~~~~~~~~~~~~~~~l~~~-G~~vi~~d~~----G--~G~s~~----------------~~~~~~~~~~~~~ 99 (357)
+.+|++-|-.++.. ..++..|++. +..++..|-. + .|.... .....++..++.+
T Consensus 4 ~~~i~i~GptgsGK---t~la~~la~~~~~~iis~Ds~Qvy~~l~i~Takp~~~E~~gv~hhlid~~~~~~~~s~~~f~~ 80 (307)
T PRK00091 4 PKVIVIVGPTASGK---TALAIELAKRLNGEIISADSMQVYRGMDIGTAKPTAEERAGVPHHLIDILDPTESYSVADFQR 80 (307)
T ss_pred ceEEEEECCCCcCH---HHHHHHHHHhCCCcEEeccccceeecccccCCCCCHHHHcCccEEeecccChhhcccHHHHHH
Confidence 34777777666543 3555566555 5567777653 1 111111 0112245667777
Q ss_pred HHHHHHHHHHhhhccCCccEEEE
Q 018375 100 DCDDFFKSVCAQEEYTDKARFLY 122 (357)
Q Consensus 100 d~~~~l~~l~~~~~~~~~~v~lv 122 (357)
+....++.+..+ ...++|+
T Consensus 81 ~a~~~i~~i~~~----gk~pIlv 99 (307)
T PRK00091 81 DALAAIADILAR----GKLPILV 99 (307)
T ss_pred HHHHHHHHHHhC----CCCEEEE
Confidence 888888776442 3344555
No 309
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=42.34 E-value=27 Score=30.56 Aligned_cols=27 Identities=15% Similarity=0.175 Sum_probs=22.0
Q ss_pred CCccEEEEEeChhHHHHHHHHhcCCCc
Q 018375 115 TDKARFLYGESMGGAVTLLLHKKDPSF 141 (357)
Q Consensus 115 ~~~~v~lvG~S~Gg~~a~~~a~~~p~~ 141 (357)
+..+-++.|-|.|+.+|..+|...++.
T Consensus 109 gl~p~~i~GtS~Gaivaa~~a~~~~~e 135 (391)
T cd07229 109 GLLPRIITGTATGALIAALVGVHTDEE 135 (391)
T ss_pred CCCCceEEEecHHHHHHHHHHcCCHHH
Confidence 566778999999999999999855443
No 310
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=41.84 E-value=59 Score=29.18 Aligned_cols=85 Identities=21% Similarity=0.361 Sum_probs=50.1
Q ss_pred ccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhH
Q 018375 49 HGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGG 128 (357)
Q Consensus 49 HG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg 128 (357)
-|++.+...--..-+++-..+||.|+.+|-.|.-.. -+.+...+..+++.- .++.|+.||--+=|
T Consensus 445 kGYgkd~a~vak~AI~~a~~~gfDVvLiDTAGR~~~---------~~~lm~~l~k~~~~~------~pd~i~~vgealvg 509 (587)
T KOG0781|consen 445 KGYGKDAAGVAKEAIQEARNQGFDVVLIDTAGRMHN---------NAPLMTSLAKLIKVN------KPDLILFVGEALVG 509 (587)
T ss_pred hhcCCChHHHHHHHHHHHHhcCCCEEEEeccccccC---------ChhHHHHHHHHHhcC------CCceEEEehhhhhC
Confidence 345544332223334555567999999998875322 233445555555544 57788888887777
Q ss_pred HHHHHHHh---------cCCCcccEEEEe
Q 018375 129 AVTLLLHK---------KDPSFWNGAVLV 148 (357)
Q Consensus 129 ~~a~~~a~---------~~p~~v~~~vl~ 148 (357)
.=++.-+. ..|..++++++.
T Consensus 510 ~dsv~q~~~fn~al~~~~~~r~id~~~lt 538 (587)
T KOG0781|consen 510 NDSVDQLKKFNRALADHSTPRLIDGILLT 538 (587)
T ss_pred cHHHHHHHHHHHHHhcCCCccccceEEEE
Confidence 65544332 134457777764
No 311
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=41.68 E-value=37 Score=28.68 Aligned_cols=17 Identities=29% Similarity=0.567 Sum_probs=15.3
Q ss_pred EEEEeChhHHHHHHHHh
Q 018375 120 FLYGESMGGAVTLLLHK 136 (357)
Q Consensus 120 ~lvG~S~Gg~~a~~~a~ 136 (357)
.+.|.|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 48999999999999975
No 312
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=41.59 E-value=31 Score=25.68 Aligned_cols=53 Identities=19% Similarity=0.146 Sum_probs=27.5
Q ss_pred CCCCCccCCCCCc--cccchhhHHHHHHHHHHHHHhhhc--cCCccEEEEEeChhHH
Q 018375 77 DYEGHGRSRGARC--YIKKFENIVNDCDDFFKSVCAQEE--YTDKARFLYGESMGGA 129 (357)
Q Consensus 77 d~~G~G~s~~~~~--~~~~~~~~~~d~~~~l~~l~~~~~--~~~~~v~lvG~S~Gg~ 129 (357)
-+-|||....... ..++.++++.-+..+-+.+..... ..+++|.|+|-|++..
T Consensus 60 ~lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 60 QLVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 3447777622111 123556666666555566654432 2467899999999886
No 313
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=41.24 E-value=26 Score=28.90 Aligned_cols=34 Identities=21% Similarity=0.200 Sum_probs=25.7
Q ss_pred eEEEEEccCCccccccHHHHHHHHhhCCcEEEEeC
Q 018375 43 AVVFLCHGYGMECSGFMRECGTRLASAGYAVFGID 77 (357)
Q Consensus 43 p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d 77 (357)
..||++|....+.. ....++..|.++||.++.++
T Consensus 231 G~IILmHd~~~T~~-aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 231 GAMVLMHPTASSTE-GLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred CcEEEEcCCccHHH-HHHHHHHHHHHCCCEEEeHH
Confidence 35889997654433 35788999999999998875
No 314
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=40.93 E-value=63 Score=22.68 Aligned_cols=15 Identities=27% Similarity=0.601 Sum_probs=11.6
Q ss_pred HHHHHhhCCcEEEEe
Q 018375 62 CGTRLASAGYAVFGI 76 (357)
Q Consensus 62 ~~~~l~~~G~~vi~~ 76 (357)
-...|.+.|+.|+.+
T Consensus 99 ~~~~L~~~Gw~Vlr~ 113 (117)
T TIGR00632 99 VNSRLQELGWRVLRV 113 (117)
T ss_pred HHHHHHHCcCEEEEE
Confidence 345778889999876
No 315
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=40.71 E-value=53 Score=26.69 Aligned_cols=20 Identities=25% Similarity=0.213 Sum_probs=17.3
Q ss_pred EEEEeChhHHHHHHHHhcCC
Q 018375 120 FLYGESMGGAVTLLLHKKDP 139 (357)
Q Consensus 120 ~lvG~S~Gg~~a~~~a~~~p 139 (357)
.+.|-|+|+.+|..++...+
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 33 KISGASAGALAACCLLCDLP 52 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCc
Confidence 39999999999999987654
No 316
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=40.63 E-value=48 Score=26.17 Aligned_cols=36 Identities=19% Similarity=0.277 Sum_probs=25.8
Q ss_pred ceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCC
Q 018375 42 KAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYE 79 (357)
Q Consensus 42 ~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~ 79 (357)
.|.+|++-|.....-. ..++..|++.||.|++--.+
T Consensus 6 ~~k~VlItgcs~GGIG--~ala~ef~~~G~~V~AtaR~ 41 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIG--YALAKEFARNGYLVYATARR 41 (289)
T ss_pred CCCeEEEeecCCcchh--HHHHHHHHhCCeEEEEEccc
Confidence 3456777775443223 47899999999999997655
No 317
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=40.15 E-value=1.1e+02 Score=27.43 Aligned_cols=68 Identities=6% Similarity=0.097 Sum_probs=41.4
Q ss_pred HhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCC--ccc
Q 018375 66 LASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPS--FWN 143 (357)
Q Consensus 66 l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~--~v~ 143 (357)
+...+|.++.+|-+|.-. .-+.+.+.+..+.+.. ....+++|--++-|.-+...+..+.+ .+.
T Consensus 178 ~~~~~~DvViIDTaGr~~---------~d~~lm~El~~i~~~~------~p~e~lLVlda~~Gq~a~~~a~~F~~~~~~~ 242 (429)
T TIGR01425 178 FKKENFDIIIVDTSGRHK---------QEDSLFEEMLQVAEAI------QPDNIIFVMDGSIGQAAEAQAKAFKDSVDVG 242 (429)
T ss_pred HHhCCCCEEEEECCCCCc---------chHHHHHHHHHHhhhc------CCcEEEEEeccccChhHHHHHHHHHhccCCc
Confidence 344579999999988522 1233455555555444 45667777777777666666554432 367
Q ss_pred EEEEe
Q 018375 144 GAVLV 148 (357)
Q Consensus 144 ~~vl~ 148 (357)
++|+-
T Consensus 243 g~IlT 247 (429)
T TIGR01425 243 SVIIT 247 (429)
T ss_pred EEEEE
Confidence 77763
No 318
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=39.97 E-value=27 Score=29.42 Aligned_cols=25 Identities=20% Similarity=0.335 Sum_probs=20.1
Q ss_pred CCccEEEEEeChhHHHHHHHHhcCC
Q 018375 115 TDKARFLYGESMGGAVTLLLHKKDP 139 (357)
Q Consensus 115 ~~~~v~lvG~S~Gg~~a~~~a~~~p 139 (357)
+..+-++.|-|.|+.+|..++...+
T Consensus 94 gl~p~~i~GsSaGAivaa~~~~~t~ 118 (323)
T cd07231 94 QLLPRVIAGSSVGSIVCAIIATRTD 118 (323)
T ss_pred CCCCCEEEEECHHHHHHHHHHcCCH
Confidence 4566679999999999999987543
No 319
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=39.77 E-value=63 Score=18.09 Aligned_cols=35 Identities=14% Similarity=0.262 Sum_probs=23.8
Q ss_pred hCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHH
Q 018375 68 SAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSV 108 (357)
Q Consensus 68 ~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l 108 (357)
+.+|.+.++|+||.-... .+.++..+.+..++...
T Consensus 11 ~~~y~~~~pdlpg~~t~G------~t~eea~~~~~eal~~~ 45 (48)
T PF03681_consen 11 DGGYVAYFPDLPGCFTQG------DTLEEALENAKEALELW 45 (48)
T ss_dssp SSSEEEEETTCCTCEEEE------SSHHHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCccChhhcC------CCHHHHHHHHHHHHHHH
Confidence 347999999999874221 26777777777766543
No 320
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=39.64 E-value=17 Score=29.06 Aligned_cols=40 Identities=18% Similarity=0.256 Sum_probs=27.3
Q ss_pred CceEEEEEccCCccccc-cHHHHHHHHhhCCcEEEEeCCCC
Q 018375 41 PKAVVFLCHGYGMECSG-FMRECGTRLASAGYAVFGIDYEG 80 (357)
Q Consensus 41 ~~p~vv~lHG~~~~~~~-~~~~~~~~l~~~G~~vi~~d~~G 80 (357)
+.|+||++.|+.++... -...+...|-.+|+.|.++.-|.
T Consensus 29 ~~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~pt 69 (228)
T PF03976_consen 29 GIPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKPT 69 (228)
T ss_dssp HHEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS--
T ss_pred CCcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCCC
Confidence 46799999999776442 23566677778899999998763
No 321
>PF13709 DUF4159: Domain of unknown function (DUF4159)
Probab=39.34 E-value=1.9e+02 Score=22.79 Aligned_cols=74 Identities=14% Similarity=0.170 Sum_probs=48.6
Q ss_pred cccEEEEeeCCCccCChHHHHHHHHHccCCCceEEEcCCC-CcccccCCCChhhhhHHHHHHHHHHHhcccccccccCCC
Q 018375 234 MIPFFVLHGEADTVTDPEVSKALYERASSRDKTIKLYPGM-WHALTSGEPDENIDIVFGDIIAWLDERMSDANAIAVTPI 312 (357)
Q Consensus 234 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~-gH~~~~~~p~~~~~~~~~~i~~fl~~~~~~~~~~~~~~~ 312 (357)
..|++++.|..+...+.+..+.+.+-+. +-=+++++.. +.. .. +...+.+.+++.+....-......
T Consensus 53 ~yP~ly~~g~~~~~~s~~e~~~Lr~Yl~--~GGfl~~D~~~~~~------~~----~~~~~r~~~~~v~p~~~L~~lp~d 120 (207)
T PF13709_consen 53 FYPFLYWPGHGDFPLSDEEIANLRRYLE--NGGFLLFDDRDCGS------AG----FDASFRRLMKRVFPEPPLEPLPAD 120 (207)
T ss_pred hCCEEEEeCCCCCCCCHHHHHHHHHHHH--cCCEEEEECCCccc------cc----ccHHHHHHHHHhcCCCCccCCCCC
Confidence 6799999999999888888888888886 3445555554 111 22 455567777777775444445555
Q ss_pred Ccccccc
Q 018375 313 HPSFKNS 319 (357)
Q Consensus 313 ~~~~~~~ 319 (357)
|+-+..-
T Consensus 121 H~l~~~~ 127 (207)
T PF13709_consen 121 HPLFRSF 127 (207)
T ss_pred CccEeee
Confidence 5555444
No 322
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=39.04 E-value=39 Score=28.27 Aligned_cols=28 Identities=25% Similarity=0.234 Sum_probs=21.3
Q ss_pred CCccEEEEEeChhHHHHHHHHhcCCCcc
Q 018375 115 TDKARFLYGESMGGAVTLLLHKKDPSFW 142 (357)
Q Consensus 115 ~~~~v~lvG~S~Gg~~a~~~a~~~p~~v 142 (357)
+..+-++.|.|.|+.+|..++....+.+
T Consensus 95 ~l~~~~i~GtSaGAi~aa~~~~~~~~El 122 (298)
T cd07206 95 DLLPRVISGSSAGAIVAALLGTHTDEEL 122 (298)
T ss_pred CCCCCEEEEEcHHHHHHHHHHcCCcHHH
Confidence 3455679999999999999987654433
No 323
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=38.48 E-value=47 Score=25.11 Aligned_cols=35 Identities=23% Similarity=0.194 Sum_probs=25.0
Q ss_pred CCceEEEEEccCCccccccHHHHHHHHhhCCcEEEE
Q 018375 40 TPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFG 75 (357)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~ 75 (357)
...+.|+++-|-|.+...- --.+++|..+|+.|.+
T Consensus 23 ~~~~~v~il~G~GnNGgDg-l~~AR~L~~~G~~V~v 57 (169)
T PF03853_consen 23 PKGPRVLILCGPGNNGGDG-LVAARHLANRGYNVTV 57 (169)
T ss_dssp CTT-EEEEEE-SSHHHHHH-HHHHHHHHHTTCEEEE
T ss_pred cCCCeEEEEECCCCChHHH-HHHHHHHHHCCCeEEE
Confidence 3456688888887775554 3678999999999887
No 324
>COG3933 Transcriptional antiterminator [Transcription]
Probab=38.11 E-value=1.9e+02 Score=25.82 Aligned_cols=77 Identities=19% Similarity=0.293 Sum_probs=52.0
Q ss_pred CCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccE
Q 018375 40 TPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKAR 119 (357)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v 119 (357)
+.-.+||+.||....++ +..++..|... --+.++|+|=- .++.+..+.+.+.++.. +..+=
T Consensus 107 ~~v~vIiiAHG~sTASS--maevanrLL~~-~~~~aiDMPLd----------vsp~~vle~l~e~~k~~------~~~~G 167 (470)
T COG3933 107 PRVKVIIIAHGYSTASS--MAEVANRLLGE-EIFIAIDMPLD----------VSPSDVLEKLKEYLKER------DYRSG 167 (470)
T ss_pred CceeEEEEecCcchHHH--HHHHHHHHhhc-cceeeecCCCc----------CCHHHHHHHHHHHHHhc------CccCc
Confidence 44568999999865433 36888888877 46899999831 26666666666666665 45554
Q ss_pred EEEEeChhHHHHHHHH
Q 018375 120 FLYGESMGGAVTLLLH 135 (357)
Q Consensus 120 ~lvG~S~Gg~~a~~~a 135 (357)
.++=..||...+..-.
T Consensus 168 lllLVDMGSL~~f~~~ 183 (470)
T COG3933 168 LLLLVDMGSLTSFGSI 183 (470)
T ss_pred eEEEEecchHHHHHHH
Confidence 5555688887665443
No 325
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=37.70 E-value=2.2e+02 Score=25.23 Aligned_cols=72 Identities=15% Similarity=0.213 Sum_probs=37.7
Q ss_pred EEEEEccCCccccccH----HHHHHHHhhCCcEEEEeCCCCC---ccCCCCCccccchhhHHHHHHHHHHHHHhhhccCC
Q 018375 44 VVFLCHGYGMECSGFM----RECGTRLASAGYAVFGIDYEGH---GRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTD 116 (357)
Q Consensus 44 ~vv~lHG~~~~~~~~~----~~~~~~l~~~G~~vi~~d~~G~---G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~ 116 (357)
+||+++... ...|. ..-...|.+.|+.|+-++ +|+ |+... +...++++.+..+...+.. .....
T Consensus 118 pvvi~Pamn--~~m~~~p~~~~Nl~~L~~~G~~ii~P~-~g~la~~~~g~--gr~~~~~~I~~~~~~~~~~----~~l~g 188 (399)
T PRK05579 118 PVLVAPAMN--TQMWENPATQRNLATLRSRGVEIIGPA-SGRLACGDVGP--GRMAEPEEIVAAAERALSP----KDLAG 188 (399)
T ss_pred CEEEEeCCC--hhHcCCHHHHHHHHHHHHCCCEEECCC-CccccCCCcCC--CCCCCHHHHHHHHHHHhhh----cccCC
Confidence 466666432 22331 344567778899887554 343 22221 1223566665555555432 12245
Q ss_pred ccEEEEEe
Q 018375 117 KARFLYGE 124 (357)
Q Consensus 117 ~~v~lvG~ 124 (357)
.++.+.|-
T Consensus 189 k~vlITgG 196 (399)
T PRK05579 189 KRVLITAG 196 (399)
T ss_pred CEEEEeCC
Confidence 67777776
No 326
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=37.22 E-value=93 Score=28.82 Aligned_cols=52 Identities=10% Similarity=0.166 Sum_probs=37.1
Q ss_pred hhHHHHHHHHHHHHHhhhccCCccEEEEEe------ChhHHHHHHHHhcCCCcccEEEEeccc
Q 018375 95 ENIVNDCDDFFKSVCAQEEYTDKARFLYGE------SMGGAVTLLLHKKDPSFWNGAVLVAPM 151 (357)
Q Consensus 95 ~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~------S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 151 (357)
..-++++..+++.+.. ..++|+++|| +.|+.+++..-+..-.+ .+.++++|.
T Consensus 320 RvRaRvis~al~d~i~----e~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp~ 377 (655)
T COG3887 320 RVRARVISTALSDIIK----ESDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDPE 377 (655)
T ss_pred HHHHHHHHHHHHHHHh----hcCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECcc
Confidence 3446677777777654 3689999999 78999998776654444 666777764
No 327
>PLN02840 tRNA dimethylallyltransferase
Probab=36.93 E-value=2.1e+02 Score=25.60 Aligned_cols=76 Identities=13% Similarity=0.132 Sum_probs=43.1
Q ss_pred ceEEEEEccCCccccccHHHHHHHHhhC-CcEEEEeCC----CCC--ccCCC----------------CCccccchhhHH
Q 018375 42 KAVVFLCHGYGMECSGFMRECGTRLASA-GYAVFGIDY----EGH--GRSRG----------------ARCYIKKFENIV 98 (357)
Q Consensus 42 ~p~vv~lHG~~~~~~~~~~~~~~~l~~~-G~~vi~~d~----~G~--G~s~~----------------~~~~~~~~~~~~ 98 (357)
+..+|++-|-.++.. ..++..|++. +..++..|- +|. |...+ .+...++..++.
T Consensus 20 ~~~vi~I~GptgsGK---Ttla~~La~~~~~~iis~Ds~qvYr~~~IgTaKpt~eE~~~V~Hhlidil~p~e~ySv~~F~ 96 (421)
T PLN02840 20 KEKVIVISGPTGAGK---SRLALELAKRLNGEIISADSVQVYRGLDVGSAKPSLSERKEVPHHLIDILHPSDDYSVGAFF 96 (421)
T ss_pred CCeEEEEECCCCCCH---HHHHHHHHHHCCCCeEeccccceecceeEEcCCCCHHHHcCCCeEeEeecCCCCceeHHHHH
Confidence 345677777655533 3444555544 445777774 232 11111 122335778889
Q ss_pred HHHHHHHHHHHhhhccCCccEEEEEe
Q 018375 99 NDCDDFFKSVCAQEEYTDKARFLYGE 124 (357)
Q Consensus 99 ~d~~~~l~~l~~~~~~~~~~v~lvG~ 124 (357)
++...+++.+..+ ....+|||-
T Consensus 97 ~~A~~~I~~i~~r----gkiPIvVGG 118 (421)
T PLN02840 97 DDARRATQDILNR----GRVPIVAGG 118 (421)
T ss_pred HHHHHHHHHHHhc----CCCEEEEcC
Confidence 9999999988653 344566664
No 328
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=36.84 E-value=32 Score=27.29 Aligned_cols=29 Identities=31% Similarity=0.349 Sum_probs=21.4
Q ss_pred EEEEEccCCccccccHHHHHHHHhhCCcEEEEeCC
Q 018375 44 VVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDY 78 (357)
Q Consensus 44 ~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~ 78 (357)
.=||++|-|-+.. +..|+++||.|+.+|+
T Consensus 39 ~rvLvPgCG~g~D------~~~La~~G~~VvGvDl 67 (218)
T PF05724_consen 39 GRVLVPGCGKGYD------MLWLAEQGHDVVGVDL 67 (218)
T ss_dssp EEEEETTTTTSCH------HHHHHHTTEEEEEEES
T ss_pred CeEEEeCCCChHH------HHHHHHCCCeEEEEec
Confidence 3478888775522 3467889999999996
No 329
>PRK13690 hypothetical protein; Provisional
Probab=36.16 E-value=87 Score=23.72 Aligned_cols=35 Identities=17% Similarity=0.283 Sum_probs=28.2
Q ss_pred chhhHHHHHHHHHHHHHhhhccCCccEEEEEeChh
Q 018375 93 KFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMG 127 (357)
Q Consensus 93 ~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~G 127 (357)
+++++.+++..+++.+.+........+.++|-|..
T Consensus 2 ~~~~i~~~~~~~~~El~~~a~l~~g~i~VvGcSTS 36 (184)
T PRK13690 2 DLEEIKKQTRQILEELLEQANLKPGQIFVLGCSTS 36 (184)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEecchH
Confidence 35667788888888888877778889999998853
No 330
>PF08433 KTI12: Chromatin associated protein KTI12 ; InterPro: IPR013641 This is a family of chromatin associated proteins which interact with the Elongator complex, a component of the elongating form of RNA polymerase II []. The Elongator complex has histone acetyltransferase activity. ; PDB: 3ADB_B 3ADC_B 3A4M_B 3A4N_B 3AM1_A 3A4L_B 3ADD_A.
Probab=35.64 E-value=1.6e+02 Score=24.33 Aligned_cols=39 Identities=18% Similarity=0.149 Sum_probs=24.0
Q ss_pred EEEEEccCCccccc-cHHHHHHHHhhCCcEEEEeCCCCCc
Q 018375 44 VVFLCHGYGMECSG-FMRECGTRLASAGYAVFGIDYEGHG 82 (357)
Q Consensus 44 ~vv~lHG~~~~~~~-~~~~~~~~l~~~G~~vi~~d~~G~G 82 (357)
++|++-|+++++.. ....+.+.|.+.++.|+.++--..+
T Consensus 2 pLiil~G~P~SGKTt~a~~L~~~~~~~~~~v~~i~~~~~~ 41 (270)
T PF08433_consen 2 PLIILCGLPCSGKTTRAKELKKYLEEKGKEVVIISDDSLG 41 (270)
T ss_dssp -EEEEE--TTSSHHHHHHHHHHHHHHTT--EEEE-THHHH
T ss_pred EEEEEEcCCCCcHHHHHHHHHHHHHhcCCEEEEEcccccc
Confidence 47888999887553 3467778888888999888855444
No 331
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=34.98 E-value=55 Score=27.44 Aligned_cols=32 Identities=19% Similarity=0.315 Sum_probs=22.2
Q ss_pred CCCceEEEEEccCCccccccHH-HHHHHHhhCC
Q 018375 39 STPKAVVFLCHGYGMECSGFMR-ECGTRLASAG 70 (357)
Q Consensus 39 ~~~~p~vv~lHG~~~~~~~~~~-~~~~~l~~~G 70 (357)
.+.+|.++=+|||.++...|.. .+++.+-+.|
T Consensus 106 ~p~KPLvLSfHG~tGTGKN~Va~iiA~n~~~~G 138 (344)
T KOG2170|consen 106 NPRKPLVLSFHGWTGTGKNYVAEIIAENLYRGG 138 (344)
T ss_pred CCCCCeEEEecCCCCCchhHHHHHHHHHHHhcc
Confidence 4678999999999998776633 3444554444
No 332
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=34.72 E-value=1.5e+02 Score=22.51 Aligned_cols=82 Identities=9% Similarity=-0.034 Sum_probs=41.9
Q ss_pred EEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCC-CccccchhhHHHHHHHHHHHHHhhhccCCccEEEEE
Q 018375 45 VFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGA-RCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYG 123 (357)
Q Consensus 45 vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~-~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG 123 (357)
-|++.|.|.+...- ..+...|...|..+..++-.....-... .--..+......++.++++.++++ .-+++.+-
T Consensus 32 ~I~i~G~G~S~~~A-~~~~~~l~~~g~~~~~~~~~~~~~~~~~Dv~I~iS~sG~t~~~i~~~~~ak~~----g~~ii~IT 106 (179)
T TIGR03127 32 RIFVAGAGRSGLVG-KAFAMRLMHLGFNVYVVGETTTPSIKKGDLLIAISGSGETESLVTVAKKAKEI----GATVAAIT 106 (179)
T ss_pred EEEEEecCHHHHHH-HHHHHHHHhCCCeEEEeCCcccCCCCCCCEEEEEeCCCCcHHHHHHHHHHHHC----CCeEEEEE
Confidence 47777877664332 5666777777888877743321111110 001123344455666666666442 34555554
Q ss_pred eChhHHHH
Q 018375 124 ESMGGAVT 131 (357)
Q Consensus 124 ~S~Gg~~a 131 (357)
.+.++.++
T Consensus 107 ~~~~s~la 114 (179)
T TIGR03127 107 TNPESTLG 114 (179)
T ss_pred CCCCCchH
Confidence 44444444
No 333
>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []. ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus
Probab=34.20 E-value=2.3e+02 Score=24.33 Aligned_cols=31 Identities=19% Similarity=0.336 Sum_probs=18.5
Q ss_pred EEEccCCccccccHHHHHHHHhhCC--cEEEEeC
Q 018375 46 FLCHGYGMECSGFMRECGTRLASAG--YAVFGID 77 (357)
Q Consensus 46 v~lHG~~~~~~~~~~~~~~~l~~~G--~~vi~~d 77 (357)
|+++|+|+- ......+++.+.... ..|++++
T Consensus 57 lL~YG~GSK-r~lL~~Fa~~~l~~~~~~~~vvvn 89 (326)
T PF04084_consen 57 LLFYGYGSK-RKLLNDFAEKYLSDWGDGPVVVVN 89 (326)
T ss_pred EEEEecChH-HHHHHHHHHHHhhccCCCcEEEEE
Confidence 677887754 333466666655552 5566665
No 334
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=33.72 E-value=97 Score=22.88 Aligned_cols=23 Identities=13% Similarity=0.280 Sum_probs=16.4
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCC
Q 018375 59 MRECGTRLASAGYAVFGIDYEGH 81 (357)
Q Consensus 59 ~~~~~~~l~~~G~~vi~~d~~G~ 81 (357)
.+.+.+.|.+.|+.|..+|....
T Consensus 2 ~~~~~~~f~~~g~~v~~l~~~~~ 24 (154)
T PF03575_consen 2 VEKFRKAFRKLGFEVDQLDLSDR 24 (154)
T ss_dssp HHHHHHHHHHCT-EEEECCCTSC
T ss_pred HHHHHHHHHHCCCEEEEEeccCC
Confidence 45667788888888888887653
No 335
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=33.52 E-value=1.1e+02 Score=25.81 Aligned_cols=121 Identities=18% Similarity=0.163 Sum_probs=60.5
Q ss_pred eEEecCCcEEEEEEEcC---CCCCceEEEEEccCCccccccHHHHHHHHhhC--CcEEEEeCCCCC--------------
Q 018375 21 YIRNARGVQLFTCRWLP---FSTPKAVVFLCHGYGMECSGFMRECGTRLASA--GYAVFGIDYEGH-------------- 81 (357)
Q Consensus 21 ~~~~~~g~~l~~~~~~p---~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~--G~~vi~~d~~G~-------------- 81 (357)
+|.+..+...||....| ......+=.|+-|.|.. ... ..++++|.++ +.+++++|.-|.
T Consensus 144 Qf~NpaN~~aH~~tT~~EI~~~~~g~~d~fVagvGTG-GTi-tGvar~Lk~~~p~i~iv~vdP~~S~~~~~G~g~~~i~G 221 (300)
T COG0031 144 QFENPANPEAHYETTGPEIWQQTDGKVDAFVAGVGTG-GTI-TGVARYLKERNPNVRIVAVDPEGSVLLSGGEGPHKIEG 221 (300)
T ss_pred hcCCCccHHHHHhhhHHHHHHHhCCCCCEEEEeCCcc-hhH-HHHHHHHHhhCCCcEEEEECCCCCcccCCCCCCcccCC
Confidence 34455556666655555 11111123444444333 222 5677777665 478999987652
Q ss_pred -ccCCCCCccccc-hhh----HHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHH--HHHHhcCCCcccEEEEecc
Q 018375 82 -GRSRGARCYIKK-FEN----IVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVT--LLLHKKDPSFWNGAVLVAP 150 (357)
Q Consensus 82 -G~s~~~~~~~~~-~~~----~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a--~~~a~~~p~~v~~~vl~~~ 150 (357)
|.+..+.....+ +++ -.+|..+..+.|.. +.=.++|.|-|+.++ +.+|.+.+. =+.+|.+-|
T Consensus 222 IG~~~ip~~~~~~~iD~v~~V~d~~A~~~~r~La~------~eGilvG~SsGA~~~aa~~~a~~~~~-g~~IVti~p 291 (300)
T COG0031 222 IGAGFVPENLDLDLIDEVIRVSDEEAIATARRLAR------EEGLLVGISSGAALAAALKLAKELPA-GKTIVTILP 291 (300)
T ss_pred CCCCcCCcccccccCceEEEECHHHHHHHHHHHHH------HhCeeecccHHHHHHHHHHHHHhcCC-CCeEEEEEC
Confidence 222111111000 111 12355555666633 334799999999864 455555553 234554444
No 336
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=33.41 E-value=2.2e+02 Score=22.28 Aligned_cols=39 Identities=13% Similarity=0.062 Sum_probs=25.8
Q ss_pred CceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCC
Q 018375 41 PKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYE 79 (357)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~ 79 (357)
..+.|++++-.......+...+.+.|.+.|..+..+...
T Consensus 28 ~~~~i~~iptA~~~~~~~~~~~~~~~~~lG~~~~~~~~~ 66 (210)
T cd03129 28 AGARVLFIPTASGDRDEYGEEYRAAFERLGVEVVHLLLI 66 (210)
T ss_pred CCCeEEEEeCCCCChHHHHHHHHHHHHHcCCceEEEecc
Confidence 345677777666554555567777888888877655543
No 337
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=33.08 E-value=76 Score=25.54 Aligned_cols=37 Identities=22% Similarity=0.229 Sum_probs=22.1
Q ss_pred CceEEEEEccCCcccccc----HHHHHHHHhhCCcEEEEeC
Q 018375 41 PKAVVFLCHGYGMECSGF----MRECGTRLASAGYAVFGID 77 (357)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~----~~~~~~~l~~~G~~vi~~d 77 (357)
+++.|++.+|.+.....| |..+++.|.+.++.|+.+-
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g 144 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLG 144 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEc
Confidence 567788888876654444 5788889988887777653
No 338
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=32.93 E-value=2.4e+02 Score=22.21 Aligned_cols=33 Identities=24% Similarity=0.088 Sum_probs=23.5
Q ss_pred EEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCC
Q 018375 45 VFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEG 80 (357)
Q Consensus 45 vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G 80 (357)
+..+.|.+. ..- +.+++.|+..|++|++.|+.-
T Consensus 16 ~~~vtGg~s--GIG-rAia~~la~~Garv~v~dl~~ 48 (256)
T KOG1200|consen 16 VAAVTGGSS--GIG-RAIAQLLAKKGARVAVADLDS 48 (256)
T ss_pred eeEEecCCc--hHH-HHHHHHHHhcCcEEEEeecch
Confidence 445555332 233 788999999999999998763
No 339
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=32.64 E-value=1.8e+02 Score=23.62 Aligned_cols=33 Identities=18% Similarity=0.137 Sum_probs=23.4
Q ss_pred EEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCC
Q 018375 45 VFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEG 80 (357)
Q Consensus 45 vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G 80 (357)
++++-|..+. .- ..++..|+++|+.|+..+...
T Consensus 11 ~vlItG~s~g--IG-~~la~~l~~~G~~v~~~~~~~ 43 (266)
T PRK06171 11 IIIVTGGSSG--IG-LAIVKELLANGANVVNADIHG 43 (266)
T ss_pred EEEEeCCCCh--HH-HHHHHHHHHCCCEEEEEeCCc
Confidence 4566664433 22 578889999999999988654
No 340
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=32.23 E-value=35 Score=27.29 Aligned_cols=29 Identities=28% Similarity=0.227 Sum_probs=20.2
Q ss_pred EEEEccCCccccccHHHHHHHHhhCCcEEEEeCCC
Q 018375 45 VFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYE 79 (357)
Q Consensus 45 vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~ 79 (357)
=||++|-|-+. -+..|+++||.|+.+|+-
T Consensus 46 rvLvPgCGkg~------D~~~LA~~G~~V~GvDlS 74 (226)
T PRK13256 46 VCLIPMCGCSI------DMLFFLSKGVKVIGIELS 74 (226)
T ss_pred eEEEeCCCChH------HHHHHHhCCCcEEEEecC
Confidence 46777755442 134688899999999973
No 341
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=31.89 E-value=3.3e+02 Score=23.39 Aligned_cols=76 Identities=16% Similarity=0.167 Sum_probs=48.1
Q ss_pred HHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCC--c
Q 018375 64 TRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPS--F 141 (357)
Q Consensus 64 ~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~--~ 141 (357)
++-..+||.|+.+|--|.= .+-.++.+.+..+.+-+.......+..+.++--+.-|.-++.=|..+.+ .
T Consensus 215 ~~Akar~~DvvliDTAGRL---------hnk~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAttGqnal~QAk~F~eav~ 285 (340)
T COG0552 215 QAAKARGIDVVLIDTAGRL---------HNKKNLMDELKKIVRVIKKDDPDAPHEILLVLDATTGQNALSQAKIFNEAVG 285 (340)
T ss_pred HHHHHcCCCEEEEeCcccc---------cCchhHHHHHHHHHHHhccccCCCCceEEEEEEcccChhHHHHHHHHHHhcC
Confidence 4444567888888876642 2345567777777766633222123347777788888888888765543 3
Q ss_pred ccEEEEe
Q 018375 142 WNGAVLV 148 (357)
Q Consensus 142 v~~~vl~ 148 (357)
++++|+-
T Consensus 286 l~GiIlT 292 (340)
T COG0552 286 LDGIILT 292 (340)
T ss_pred CceEEEE
Confidence 7777774
No 342
>TIGR00174 miaA tRNA isopentenyltransferase (miaA). Catalyzes the first step in the modification of an adenosine near the anticodon to 2-methylthio-N6-isopentyladenosine.
Probab=31.87 E-value=1.9e+02 Score=24.21 Aligned_cols=30 Identities=13% Similarity=0.132 Sum_probs=20.4
Q ss_pred cchhhHHHHHHHHHHHHHhhhccCCccEEEEEeC
Q 018375 92 KKFENIVNDCDDFFKSVCAQEEYTDKARFLYGES 125 (357)
Q Consensus 92 ~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S 125 (357)
++..++..+....++.+.++ ....+|+|-|
T Consensus 68 ~~v~~f~~~a~~~i~~~~~~----g~~pi~vGGT 97 (287)
T TIGR00174 68 YSAADFQTLALNAIADITAR----GKIPLLVGGT 97 (287)
T ss_pred EcHHHHHHHHHHHHHHHHhC----CCCEEEEcCc
Confidence 46677788888888887542 3446677744
No 343
>COG3621 Patatin [General function prediction only]
Probab=31.78 E-value=1.4e+02 Score=25.50 Aligned_cols=55 Identities=18% Similarity=0.218 Sum_probs=32.7
Q ss_pred cEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEE-EEEeChhHHHHHHHHhcCC
Q 018375 71 YAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARF-LYGESMGGAVTLLLHKKDP 139 (357)
Q Consensus 71 ~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~-lvG~S~Gg~~a~~~a~~~p 139 (357)
|++..+|--|.- -....++...++++.... -.+.+. +-|.|.||.+++.+|...+
T Consensus 9 ~rIlsldGGGvr------------G~i~lE~lr~ieqiqGkk--l~e~FDl~~GTSiGgilal~La~~ks 64 (394)
T COG3621 9 YRILSLDGGGVR------------GAILLEKLRIIEQIQGKK--LCEYFDLIGGTSIGGILALGLALGKS 64 (394)
T ss_pred eeEEEecCCccc------------cHHHHHHHHHHHHHhCCc--ceeeEeeecCccHHHHHHHHHhcCCC
Confidence 788888854421 133445555666542111 112233 6699999999999987544
No 344
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=31.71 E-value=80 Score=23.37 Aligned_cols=19 Identities=32% Similarity=0.282 Sum_probs=16.7
Q ss_pred ccEEEEEeChhHHHHHHHH
Q 018375 117 KARFLYGESMGGAVTLLLH 135 (357)
Q Consensus 117 ~~v~lvG~S~Gg~~a~~~a 135 (357)
..-.+.|.|.|+.++..++
T Consensus 28 ~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 28 CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCCEEEEEcHHHHHHHHHh
Confidence 5567899999999999998
No 345
>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily. This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.
Probab=31.62 E-value=91 Score=20.71 Aligned_cols=30 Identities=27% Similarity=0.381 Sum_probs=18.2
Q ss_pred CCceEEEEEccCCccccccHHHHHHHHhhCCcEEE
Q 018375 40 TPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVF 74 (357)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi 74 (357)
..+++||+|.....+ ...+..|.+.||.+.
T Consensus 60 ~~~~ivv~C~~G~rs-----~~aa~~L~~~G~~~~ 89 (100)
T cd01523 60 DDQEVTVICAKEGSS-----QFVAELLAERGYDVD 89 (100)
T ss_pred CCCeEEEEcCCCCcH-----HHHHHHHHHcCceeE
Confidence 345666666543211 456678888899843
No 346
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=31.55 E-value=3.9e+02 Score=24.05 Aligned_cols=70 Identities=17% Similarity=0.184 Sum_probs=40.3
Q ss_pred HHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCC--c
Q 018375 64 TRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPS--F 141 (357)
Q Consensus 64 ~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~--~ 141 (357)
..+...+|.++.+|-+|....+ +...+.+..+.+.+ ....+++|--++-|.-+...|..+-+ .
T Consensus 176 ~~~~~~~~DvVIIDTaGr~~~d---------~~l~~eL~~i~~~~------~p~e~lLVvda~tgq~~~~~a~~f~~~v~ 240 (428)
T TIGR00959 176 EYAKENGFDVVIVDTAGRLQID---------EELMEELAAIKEIL------NPDEILLVVDAMTGQDAVNTAKTFNERLG 240 (428)
T ss_pred HHHHhcCCCEEEEeCCCccccC---------HHHHHHHHHHHHhh------CCceEEEEEeccchHHHHHHHHHHHhhCC
Confidence 3444567999999999864321 23445555555444 34556666666656655555543321 3
Q ss_pred ccEEEEe
Q 018375 142 WNGAVLV 148 (357)
Q Consensus 142 v~~~vl~ 148 (357)
+.++|+.
T Consensus 241 i~giIlT 247 (428)
T TIGR00959 241 LTGVVLT 247 (428)
T ss_pred CCEEEEe
Confidence 6677754
No 347
>KOG1532 consensus GTPase XAB1, interacts with DNA repair protein XPA [Replication, recombination and repair]
Probab=31.48 E-value=3.1e+02 Score=22.94 Aligned_cols=39 Identities=18% Similarity=0.296 Sum_probs=25.4
Q ss_pred CCceEEEEEccCCcc-ccccHHHHHHHHhhCCcEEEEeCC
Q 018375 40 TPKAVVFLCHGYGME-CSGFMRECGTRLASAGYAVFGIDY 78 (357)
Q Consensus 40 ~~~p~vv~lHG~~~~-~~~~~~~~~~~l~~~G~~vi~~d~ 78 (357)
...|++|++-|..++ ...|.+.+..++.+.+-..+++++
T Consensus 16 ~~~p~~ilVvGMAGSGKTTF~QrL~~hl~~~~~ppYviNL 55 (366)
T KOG1532|consen 16 IQRPVIILVVGMAGSGKTTFMQRLNSHLHAKKTPPYVINL 55 (366)
T ss_pred ccCCcEEEEEecCCCCchhHHHHHHHHHhhccCCCeEEeC
Confidence 346777788887655 446778888888777554444443
No 348
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=31.39 E-value=2.2e+02 Score=21.66 Aligned_cols=67 Identities=21% Similarity=0.256 Sum_probs=34.6
Q ss_pred CCcEEEEeCCCCCccCCCCCccccchhhHH---HHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCC
Q 018375 69 AGYAVFGIDYEGHGRSRGARCYIKKFENIV---NDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPS 140 (357)
Q Consensus 69 ~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~---~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~ 140 (357)
.|.+++.+..+. +...........++..+ +.+..++..|+++ +..+=+|+|||--|-. +.+-...|+
T Consensus 19 ~GV~~~~y~~~~-~~~~~~~~~~~~~e~~~~rg~av~~a~~~L~~~---Gf~PDvI~~H~GWGe~-Lflkdv~P~ 88 (171)
T PF12000_consen 19 PGVRVVRYRPPR-GPTPGTHPYVRDFEAAVLRGQAVARAARQLRAQ---GFVPDVIIAHPGWGET-LFLKDVFPD 88 (171)
T ss_pred CCcEEEEeCCCC-CCCCCCCcccccHHHHHHHHHHHHHHHHHHHHc---CCCCCEEEEcCCcchh-hhHHHhCCC
Confidence 477888877732 22222222222444443 3445555555443 5667788898855532 333345665
No 349
>COG0426 FpaA Uncharacterized flavoproteins [Energy production and conversion]
Probab=31.25 E-value=1.8e+02 Score=25.55 Aligned_cols=73 Identities=16% Similarity=0.208 Sum_probs=44.7
Q ss_pred EEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEe
Q 018375 45 VFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGE 124 (357)
Q Consensus 45 vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~ 124 (357)
|++.--++.+ ......+++-|.+.|..|..+++.-. |..++++.+ ...+-+++|.
T Consensus 251 l~Y~smyg~T-~~ma~aiaegl~~~gv~v~~~~~~~~------------------~~~eI~~~i------~~a~~~vvGs 305 (388)
T COG0426 251 LIYDSMYGNT-EKMAQAIAEGLMKEGVDVEVINLEDA------------------DPSEIVEEI------LDAKGLVVGS 305 (388)
T ss_pred EEEecccCCH-HHHHHHHHHHhhhcCCceEEEEcccC------------------CHHHHHHHH------hhcceEEEec
Confidence 3333334433 33346778888888888888876411 444445555 3456788888
Q ss_pred C---------hhHHHHHHHHhcCCCcc
Q 018375 125 S---------MGGAVTLLLHKKDPSFW 142 (357)
Q Consensus 125 S---------~Gg~~a~~~a~~~p~~v 142 (357)
+ ++..+....+...+.+.
T Consensus 306 PT~~~~~~p~i~~~l~~v~~~~~~~k~ 332 (388)
T COG0426 306 PTINGGAHPPIQTALGYVLALAPKNKL 332 (388)
T ss_pred CcccCCCCchHHHHHHHHHhccCcCce
Confidence 7 56666666666666654
No 350
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=31.20 E-value=80 Score=28.22 Aligned_cols=41 Identities=20% Similarity=0.144 Sum_probs=25.6
Q ss_pred ccEEEEeeCCCccCChHHHHHHHHHccCCCceEEEcCCCCcccccC
Q 018375 235 IPFFVLHGEADTVTDPEVSKALYERASSRDKTIKLYPGMWHALTSG 280 (357)
Q Consensus 235 ~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 280 (357)
.-|+++.|+.|++...... +... ..+..++|||++|..-+-
T Consensus 377 tnviFtNG~~DPW~~lgv~----~~~~-~~~~~~~I~g~~Hc~Dl~ 417 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALGVT----SDSS-DSVPAIVIPGGAHCSDLY 417 (434)
T ss_dssp -SEEEEEETT-CCGGGS------S-SS-SSEEEEEETT--TTGGGS
T ss_pred CeEEeeCCCCCCcccccCC----CCCC-CCcccEEECCCeeecccc
Confidence 4699999999999766522 2222 366778899999987653
No 351
>PHA02114 hypothetical protein
Probab=30.77 E-value=87 Score=20.90 Aligned_cols=35 Identities=23% Similarity=0.357 Sum_probs=26.3
Q ss_pred ceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeC
Q 018375 42 KAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGID 77 (357)
Q Consensus 42 ~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d 77 (357)
..+||+=-.+..+...| -.++..|.+.||.|++-.
T Consensus 82 ~gtivldvn~amsr~pw-i~v~s~le~~g~~vvatq 116 (127)
T PHA02114 82 YGTIVLDVNYAMSRAPW-IKVISRLEEAGFNVVATQ 116 (127)
T ss_pred cCeEEEEehhhhccCcH-HHHHHHHHhcCceeeehh
Confidence 34677766777777777 678888988999998753
No 352
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=30.48 E-value=1.3e+02 Score=23.04 Aligned_cols=14 Identities=29% Similarity=0.866 Sum_probs=7.6
Q ss_pred CcEEEEeCCCCCcc
Q 018375 70 GYAVFGIDYEGHGR 83 (357)
Q Consensus 70 G~~vi~~d~~G~G~ 83 (357)
|+.++.+-+-|.|.
T Consensus 33 ~~~~iNLGfsG~~~ 46 (178)
T PF14606_consen 33 GLDVINLGFSGNGK 46 (178)
T ss_dssp T-EEEEEE-TCCCS
T ss_pred CCCeEeeeecCccc
Confidence 57777776666553
No 353
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=30.42 E-value=1.9e+02 Score=23.79 Aligned_cols=31 Identities=23% Similarity=0.270 Sum_probs=20.0
Q ss_pred CCceEEEEEccCCccccccHHHHHHHHhhCC
Q 018375 40 TPKAVVFLCHGYGMECSGFMRECGTRLASAG 70 (357)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G 70 (357)
...+.|++-||........+..+...|.+.|
T Consensus 140 ~~~a~vlmGHGt~h~an~~Y~~l~~~l~~~~ 170 (262)
T PF06180_consen 140 KDEAVVLMGHGTPHPANAAYSALQAMLKKHG 170 (262)
T ss_dssp TTEEEEEEE---SCHHHHHHHHHHHHHHCCT
T ss_pred CCCEEEEEeCCCCCCccHHHHHHHHHHHhCC
Confidence 4567888899987665555577877887775
No 354
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=30.30 E-value=84 Score=22.84 Aligned_cols=41 Identities=24% Similarity=0.259 Sum_probs=25.6
Q ss_pred EEEEccCCcc-ccccHHHHHHHHhhCCcEEEEeCCCCCccCC
Q 018375 45 VFLCHGYGME-CSGFMRECGTRLASAGYAVFGIDYEGHGRSR 85 (357)
Q Consensus 45 vv~lHG~~~~-~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~ 85 (357)
+|.+-|..++ .......++..|.++||+|.++=.-++|...
T Consensus 2 vv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~~ 43 (140)
T PF03205_consen 2 VVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQFE 43 (140)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTSTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCcc
Confidence 5666665443 3355678899999999999866555665554
No 355
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=30.21 E-value=71 Score=27.03 Aligned_cols=22 Identities=27% Similarity=0.315 Sum_probs=18.9
Q ss_pred CCccEEEEEeChhHHHHHHHHh
Q 018375 115 TDKARFLYGESMGGAVTLLLHK 136 (357)
Q Consensus 115 ~~~~v~lvG~S~Gg~~a~~~a~ 136 (357)
+..+..+.|||+|=+.|+.++.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 4678899999999999888875
No 356
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=29.92 E-value=88 Score=25.50 Aligned_cols=22 Identities=32% Similarity=0.327 Sum_probs=18.2
Q ss_pred cEEEEEeChhHHHHHHHHhcCC
Q 018375 118 ARFLYGESMGGAVTLLLHKKDP 139 (357)
Q Consensus 118 ~v~lvG~S~Gg~~a~~~a~~~p 139 (357)
.-.+.|-|.|+.++..++...+
T Consensus 37 ~~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 37 ARKIYGASAGALTATALVTGVC 58 (249)
T ss_pred CCeEEEEcHHHHHHHHHHcCCC
Confidence 3568999999999999987654
No 357
>cd02011 TPP_PK Thiamine pyrophosphate (TPP) family, Phosphoketolase (PK) subfamily, TPP-binding module; PK catalyzes the conversion of D-xylulose 5-phosphate and phosphate to acetyl phosphate, D-glyceraldehyde-3-phosphate and H2O. This enzyme requires divalent magnesium ions and TPP for activity.
Probab=29.43 E-value=3e+02 Score=22.12 Aligned_cols=34 Identities=15% Similarity=0.318 Sum_probs=21.7
Q ss_pred EEEEEccCCcccccc-----HHHHHHHHhhCCcEEEEeC
Q 018375 44 VVFLCHGYGMECSGF-----MRECGTRLASAGYAVFGID 77 (357)
Q Consensus 44 ~vv~lHG~~~~~~~~-----~~~~~~~l~~~G~~vi~~d 77 (357)
+||...|+..+...- ...+...+...||.++.+|
T Consensus 117 pIld~Ng~~i~~pt~~~~~~~e~l~~~~~~yG~~~~~VD 155 (227)
T cd02011 117 PILHLNGYKISNPTILARISHEELEALFRGYGYEPYFVE 155 (227)
T ss_pred EEEEcCCCcccCCccccccCchhHHHHHHhCCCceEEEC
Confidence 455555654332211 2567888888899999988
No 358
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=29.15 E-value=58 Score=22.69 Aligned_cols=21 Identities=29% Similarity=0.556 Sum_probs=18.7
Q ss_pred HHHHHHHHhhCCcEEEEeCCC
Q 018375 59 MRECGTRLASAGYAVFGIDYE 79 (357)
Q Consensus 59 ~~~~~~~l~~~G~~vi~~d~~ 79 (357)
+..++..|+++||.|++.|.-
T Consensus 25 ~~~VA~~L~e~g~dv~atDI~ 45 (129)
T COG1255 25 FLDVAKRLAERGFDVLATDIN 45 (129)
T ss_pred HHHHHHHHHHcCCcEEEEecc
Confidence 478999999999999999964
No 359
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=29.03 E-value=68 Score=29.60 Aligned_cols=25 Identities=24% Similarity=0.113 Sum_probs=21.2
Q ss_pred cCCccEEEEEeChhHHHHHHHHhcC
Q 018375 114 YTDKARFLYGESMGGAVTLLLHKKD 138 (357)
Q Consensus 114 ~~~~~v~lvG~S~Gg~~a~~~a~~~ 138 (357)
++..+-.++|||+|=+.|+..|-..
T Consensus 262 ~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 262 FAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred cCCCCCEEeecCHHHHHHHHHhCCC
Confidence 3678889999999999999888654
No 360
>COG0324 MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis]
Probab=28.93 E-value=3.6e+02 Score=22.90 Aligned_cols=76 Identities=16% Similarity=0.177 Sum_probs=44.1
Q ss_pred eEEEEEccCCccccccHHHHHHHHhhC-CcEEEEeCC----CCC--ccCCC----------------CCccccchhhHHH
Q 018375 43 AVVFLCHGYGMECSGFMRECGTRLASA-GYAVFGIDY----EGH--GRSRG----------------ARCYIKKFENIVN 99 (357)
Q Consensus 43 p~vv~lHG~~~~~~~~~~~~~~~l~~~-G~~vi~~d~----~G~--G~s~~----------------~~~~~~~~~~~~~ 99 (357)
+.++++-|-.++.. ..++-.|+++ |-.||..|- +|. |...+ .+...++..++.+
T Consensus 3 ~~~i~I~GPTAsGK---T~lai~LAk~~~~eIIs~DSmQvYr~mdIGTAKps~~e~~~vpHhliDi~~p~e~ysa~~f~~ 79 (308)
T COG0324 3 PKLIVIAGPTASGK---TALAIALAKRLGGEIISLDSMQVYRGLDIGTAKPSLEELAGVPHHLIDIRDPTESYSAAEFQR 79 (308)
T ss_pred ccEEEEECCCCcCH---HHHHHHHHHHcCCcEEecchhhhcCCCcccCCCCCHHHHcCCCEEEecccCccccccHHHHHH
Confidence 44666666555433 3444455544 667888884 332 21111 1122357778888
Q ss_pred HHHHHHHHHHhhhccCCccEEEEEeC
Q 018375 100 DCDDFFKSVCAQEEYTDKARFLYGES 125 (357)
Q Consensus 100 d~~~~l~~l~~~~~~~~~~v~lvG~S 125 (357)
|+...++.+..+ .+-.+|||-|
T Consensus 80 ~a~~~i~~i~~r----gk~pIlVGGT 101 (308)
T COG0324 80 DALAAIDDILAR----GKLPILVGGT 101 (308)
T ss_pred HHHHHHHHHHhC----CCCcEEEccH
Confidence 999999888653 3456777743
No 361
>PLN02251 pyrophosphate-dependent phosphofructokinase
Probab=28.71 E-value=3.2e+02 Score=25.62 Aligned_cols=94 Identities=10% Similarity=0.043 Sum_probs=47.6
Q ss_pred eEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCc---cccchhhHHHHHHHHHHHHHhhhccCCccE
Q 018375 43 AVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARC---YIKKFENIVNDCDDFFKSVCAQEEYTDKAR 119 (357)
Q Consensus 43 p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~---~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v 119 (357)
-.+|++-|-++... - ..+++++.+.|+.+-++-.|..-+.+-... ....++..++-+..++..+..... ...+.
T Consensus 192 d~LViIGGddS~~~-A-~~Lae~~~~~g~~i~VIGVPKTIDNDL~~td~e~s~GFdTA~k~~a~~I~ni~~da~-S~~k~ 268 (568)
T PLN02251 192 DGLVVIGGDDSNTN-A-CLLAEYFRAKNLKTRVIGCPKTIDGDLKSKEVPTSFGFDTACKIYSEMIGNVMIDAR-STGKY 268 (568)
T ss_pred CEEEEeCCchHHHH-H-HHHHHHHHhcCCCeeEEEeCceEeCCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHH-hhCCE
Confidence 35777766554422 2 467778877885544443343322221111 112556666666666666644222 12222
Q ss_pred E----EEEeChhHHHHHHHH-hcCCC
Q 018375 120 F----LYGESMGGAVTLLLH-KKDPS 140 (357)
Q Consensus 120 ~----lvG~S~Gg~~a~~~a-~~~p~ 140 (357)
+ ++|-+.| ++|+..+ +..|+
T Consensus 269 ~~~VevMGR~aG-~LAL~~aLat~pn 293 (568)
T PLN02251 269 YHFVRLMGRAAS-HITLECALQTHPN 293 (568)
T ss_pred EEEEEeCCCchH-HHHHHHHHhhCCC
Confidence 2 7788776 4444444 44554
No 362
>KOG4231 consensus Intracellular membrane-bound Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=28.40 E-value=79 Score=28.56 Aligned_cols=17 Identities=35% Similarity=0.571 Sum_probs=15.1
Q ss_pred EEEeChhHHHHHHHHhc
Q 018375 121 LYGESMGGAVTLLLHKK 137 (357)
Q Consensus 121 lvG~S~Gg~~a~~~a~~ 137 (357)
+.|.|.||++|..+...
T Consensus 454 ICGvSTG~ilA~~Lg~k 470 (763)
T KOG4231|consen 454 ICGVSTGGILAIALGVK 470 (763)
T ss_pred HhccCchHHHHHHHHhc
Confidence 88999999999988754
No 363
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=28.32 E-value=1.1e+02 Score=26.30 Aligned_cols=36 Identities=17% Similarity=0.246 Sum_probs=26.3
Q ss_pred ceEEEEEcc-CCcccccc----HHHHHHHHhhCCcEEEEeC
Q 018375 42 KAVVFLCHG-YGMECSGF----MRECGTRLASAGYAVFGID 77 (357)
Q Consensus 42 ~p~vv~lHG-~~~~~~~~----~~~~~~~l~~~G~~vi~~d 77 (357)
+|.|++.|| ..+....| |..+++.|.++|+.|+.+-
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g 215 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFG 215 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEec
Confidence 578999999 44343333 5788999999998888763
No 364
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=28.30 E-value=2.6e+02 Score=26.63 Aligned_cols=65 Identities=17% Similarity=0.116 Sum_probs=39.2
Q ss_pred CCCceEEEEEccCCcccccc--HHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHH
Q 018375 39 STPKAVVFLCHGYGMECSGF--MRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVC 109 (357)
Q Consensus 39 ~~~~p~vv~lHG~~~~~~~~--~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~ 109 (357)
..-+.+++++||.....-.. -..+...|...|..|-.+-+|+-|.+-.. .+...+-+..+++++.
T Consensus 548 ~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~------~~~~~~~~~~~~~~~~ 614 (620)
T COG1506 548 DNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSR------PENRVKVLKEILDWFK 614 (620)
T ss_pred cccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCC------chhHHHHHHHHHHHHH
Confidence 34456799999976542221 24677888888988877777765444322 2334445555555553
No 365
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=28.26 E-value=56 Score=28.16 Aligned_cols=18 Identities=22% Similarity=0.351 Sum_probs=15.9
Q ss_pred EEEEeChhHHHHHHHHhc
Q 018375 120 FLYGESMGGAVTLLLHKK 137 (357)
Q Consensus 120 ~lvG~S~Gg~~a~~~a~~ 137 (357)
.+.|.|.||.+|+.++..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 588999999999999863
No 366
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=28.22 E-value=1.1e+02 Score=24.92 Aligned_cols=20 Identities=20% Similarity=0.167 Sum_probs=17.7
Q ss_pred EEEEeChhHHHHHHHHhcCC
Q 018375 120 FLYGESMGGAVTLLLHKKDP 139 (357)
Q Consensus 120 ~lvG~S~Gg~~a~~~a~~~p 139 (357)
.++|-|.|+.++..++...+
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCC
Confidence 89999999999999987653
No 367
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=28.21 E-value=4.8e+02 Score=24.02 Aligned_cols=25 Identities=24% Similarity=0.068 Sum_probs=18.2
Q ss_pred HHHHHHHHhhCC-cEEEEeCCCCCcc
Q 018375 59 MRECGTRLASAG-YAVFGIDYEGHGR 83 (357)
Q Consensus 59 ~~~~~~~l~~~G-~~vi~~d~~G~G~ 83 (357)
...++..|.+.| +.|-.+|......
T Consensus 25 l~~lAa~L~~~G~~~V~iiD~~~~~~ 50 (497)
T TIGR02026 25 VAYIGGALLDAGYHDVTFLDAMTGPL 50 (497)
T ss_pred HHHHHHHHHhcCCcceEEecccccCC
Confidence 456777788889 6899999765433
No 368
>KOG2214 consensus Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=28.18 E-value=25 Score=31.44 Aligned_cols=32 Identities=16% Similarity=0.147 Sum_probs=25.1
Q ss_pred CCccEEEEEeChhHHHHHHHHhcCCCcccEEE
Q 018375 115 TDKARFLYGESMGGAVTLLLHKKDPSFWNGAV 146 (357)
Q Consensus 115 ~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~v 146 (357)
+.-|-++.|-|+||.+|..++.+..+.++.+.
T Consensus 200 dLlP~IIsGsS~GaivAsl~~v~~~eEl~~Ll 231 (543)
T KOG2214|consen 200 DLLPNIISGSSAGAIVASLVGVRSNEELKQLL 231 (543)
T ss_pred cccchhhcCCchhHHHHHHHhhcchHHHHHHh
Confidence 56778999999999999999877655555443
No 369
>COG1856 Uncharacterized homolog of biotin synthetase [Function unknown]
Probab=28.12 E-value=3.2e+02 Score=21.96 Aligned_cols=82 Identities=15% Similarity=0.077 Sum_probs=47.6
Q ss_pred HHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHH----HHHHHHh
Q 018375 61 ECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGA----VTLLLHK 136 (357)
Q Consensus 61 ~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~----~a~~~a~ 136 (357)
..++.|...+..|+..|+-|-...-. ..+.+...++|....+..|.+ .+...-+=+.+|-+.|+. -|+.+..
T Consensus 101 ~~~eklk~~~vdvvsLDfvgDn~vIk---~vy~l~ksv~dyl~~l~~L~e-~~irvvpHitiGL~~gki~~e~kaIdiL~ 176 (275)
T COG1856 101 SDLEKLKEELVDVVSLDFVGDNDVIK---RVYKLPKSVEDYLRSLLLLKE-NGIRVVPHITIGLDFGKIHGEFKAIDILV 176 (275)
T ss_pred HHHHHHHHhcCcEEEEeecCChHHHH---HHHcCCccHHHHHHHHHHHHH-cCceeceeEEEEeccCcccchHHHHHHHh
Confidence 34566667778899999876432211 112233335566666666643 222345566899999986 4677776
Q ss_pred cCCCcccEEEEe
Q 018375 137 KDPSFWNGAVLV 148 (357)
Q Consensus 137 ~~p~~v~~~vl~ 148 (357)
.++ .+.+|+.
T Consensus 177 ~~~--~DalVl~ 186 (275)
T COG1856 177 NYE--PDALVLV 186 (275)
T ss_pred cCC--CCeEEEE
Confidence 555 3444443
No 370
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=27.95 E-value=82 Score=25.59 Aligned_cols=18 Identities=28% Similarity=0.372 Sum_probs=16.0
Q ss_pred EEEEEeChhHHHHHHHHh
Q 018375 119 RFLYGESMGGAVTLLLHK 136 (357)
Q Consensus 119 v~lvG~S~Gg~~a~~~a~ 136 (357)
-.+.|-|+|+.+|..++.
T Consensus 33 ~~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 33 KRFAGASAGSLVAAVLLT 50 (246)
T ss_pred CEEEEECHHHHHHHHHhc
Confidence 379999999999999984
No 371
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=27.93 E-value=1.2e+02 Score=25.73 Aligned_cols=35 Identities=17% Similarity=0.114 Sum_probs=23.8
Q ss_pred CceEEEEEccCCcccccc----HHHHHHHHhhCCcEEEE
Q 018375 41 PKAVVFLCHGYGMECSGF----MRECGTRLASAGYAVFG 75 (357)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~----~~~~~~~l~~~G~~vi~ 75 (357)
..+.|+++||.......| |..+++.+.+.|+.|+.
T Consensus 177 ~~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl 215 (322)
T PRK10964 177 AGPYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKL 215 (322)
T ss_pred CCCeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEE
Confidence 346677888865443434 46788888878888765
No 372
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=27.84 E-value=57 Score=27.24 Aligned_cols=20 Identities=25% Similarity=0.265 Sum_probs=17.0
Q ss_pred EEEEEeChhHHHHHHHHhcC
Q 018375 119 RFLYGESMGGAVTLLLHKKD 138 (357)
Q Consensus 119 v~lvG~S~Gg~~a~~~a~~~ 138 (357)
=.++|.|.||.+|+.++...
T Consensus 36 D~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 36 DLFAGTSAGSLIALGLALGY 55 (288)
T ss_pred eEEEEeCHHHHHHHHHHcCc
Confidence 36899999999999998643
No 373
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=27.81 E-value=2.9e+02 Score=24.44 Aligned_cols=57 Identities=11% Similarity=0.182 Sum_probs=30.9
Q ss_pred HHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHH
Q 018375 64 TRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLH 135 (357)
Q Consensus 64 ~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a 135 (357)
..+.+.+|.||.+|-.|.-. .-..+.+++.++.+.+ .++.+++|=-+.=|..|..-|
T Consensus 177 ~~fKke~fdvIIvDTSGRh~---------qe~sLfeEM~~v~~ai------~Pd~vi~VmDasiGQaae~Qa 233 (483)
T KOG0780|consen 177 DRFKKENFDVIIVDTSGRHK---------QEASLFEEMKQVSKAI------KPDEIIFVMDASIGQAAEAQA 233 (483)
T ss_pred HHHHhcCCcEEEEeCCCchh---------hhHHHHHHHHHHHhhc------CCCeEEEEEeccccHhHHHHH
Confidence 45666789999999776422 1233445555555555 445555444444444444333
No 374
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=27.75 E-value=4.2e+02 Score=23.24 Aligned_cols=34 Identities=18% Similarity=0.166 Sum_probs=23.5
Q ss_pred CCccEEEEEeC-hhHHHHHHHHhcCCCcccEEEEeccc
Q 018375 115 TDKARFLYGES-MGGAVTLLLHKKDPSFWNGAVLVAPM 151 (357)
Q Consensus 115 ~~~~v~lvG~S-~Gg~~a~~~a~~~p~~v~~~vl~~~~ 151 (357)
...+|.|+|-. .|+.++..++.. -|..+++++.-
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~---Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAA---GVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHc---CCCeEEEEeCC
Confidence 56789999876 555566666543 27788888764
No 375
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=27.72 E-value=67 Score=24.30 Aligned_cols=23 Identities=22% Similarity=0.260 Sum_probs=18.1
Q ss_pred CCccEEEEEeChhHHHHHHHHhc
Q 018375 115 TDKARFLYGESMGGAVTLLLHKK 137 (357)
Q Consensus 115 ~~~~v~lvG~S~Gg~~a~~~a~~ 137 (357)
....-.+.|-|.||.+|+.++..
T Consensus 25 ~~~~d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 25 GERFDVISGTSAGALNAALLALG 47 (204)
T ss_dssp CCT-SEEEEECCHHHHHHHHHTC
T ss_pred CCCccEEEEcChhhhhHHHHHhC
Confidence 34556799999999999888765
No 376
>COG0218 Predicted GTPase [General function prediction only]
Probab=27.60 E-value=64 Score=25.13 Aligned_cols=62 Identities=24% Similarity=0.412 Sum_probs=34.8
Q ss_pred cCCccccEEEEeeCCCccCChHHH---HHHHHHccC-CCce--EEEcCCCCcccccCCCChhhhhHHHHHHHHHHH
Q 018375 230 LSKVMIPFFVLHGEADTVTDPEVS---KALYERASS-RDKT--IKLYPGMWHALTSGEPDENIDIVFGDIIAWLDE 299 (357)
Q Consensus 230 ~~~i~~Pvl~i~g~~D~~~~~~~~---~~~~~~~~~-~~~~--~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~ 299 (357)
+....+|++++....|.+-..+.. ....+.+.. +... ++.++- ......+++...|.+|+..
T Consensus 131 l~~~~i~~~vv~tK~DKi~~~~~~k~l~~v~~~l~~~~~~~~~~~~~ss--------~~k~Gi~~l~~~i~~~~~~ 198 (200)
T COG0218 131 LLELGIPVIVVLTKADKLKKSERNKQLNKVAEELKKPPPDDQWVVLFSS--------LKKKGIDELKAKILEWLKE 198 (200)
T ss_pred HHHcCCCeEEEEEccccCChhHHHHHHHHHHHHhcCCCCccceEEEEec--------ccccCHHHHHHHHHHHhhc
Confidence 444578999999999998765543 333333322 1221 333322 1122245578888888754
No 377
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=27.58 E-value=59 Score=26.68 Aligned_cols=15 Identities=27% Similarity=0.530 Sum_probs=12.9
Q ss_pred CCccEEEEEeChhHH
Q 018375 115 TDKARFLYGESMGGA 129 (357)
Q Consensus 115 ~~~~v~lvG~S~Gg~ 129 (357)
....|+++|||+|..
T Consensus 233 ~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEV 247 (270)
T ss_pred CCCEEEEEeCCCchh
Confidence 468899999999975
No 378
>COG0796 MurI Glutamate racemase [Cell envelope biogenesis, outer membrane]
Probab=27.47 E-value=1.7e+02 Score=24.14 Aligned_cols=62 Identities=19% Similarity=0.135 Sum_probs=47.4
Q ss_pred ccEEEEeeCCCccCChHHHHHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHHhc
Q 018375 235 IPFFVLHGEADTVTDPEVSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDERM 301 (357)
Q Consensus 235 ~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~ 301 (357)
.|+.++=+ .+-.....+++.+.+ |+.+++.+-+..++++-+.+++...+....+.+||.++.
T Consensus 6 ~~IgvFDS---GVGGLsVlrei~~~L--P~e~~iY~~D~a~~PYG~ks~e~I~~~~~~i~~~l~~~~ 67 (269)
T COG0796 6 PPIGVFDS---GVGGLSVLREIRRQL--PDEDIIYVGDTARFPYGEKSEEEIRERTLEIVDFLLERG 67 (269)
T ss_pred CeEEEEEC---CCCcHHHHHHHHHHC--CCCcEEEEecCCCCCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 46666522 223456677888888 588999999999999988888888888888999998764
No 379
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=27.01 E-value=1e+02 Score=28.04 Aligned_cols=41 Identities=10% Similarity=0.118 Sum_probs=32.6
Q ss_pred CCceEEEEEccCCcccc-ccHHHHHHHHhhCCcEEEEeCCCC
Q 018375 40 TPKAVVFLCHGYGMECS-GFMRECGTRLASAGYAVFGIDYEG 80 (357)
Q Consensus 40 ~~~p~vv~lHG~~~~~~-~~~~~~~~~l~~~G~~vi~~d~~G 80 (357)
.+.|+||++-|+-++.. .-...+...|..+|+.|+++..|.
T Consensus 37 ~~~~vlIv~eG~DaaGKg~~I~~l~~~ldprg~~v~~~~~P~ 78 (493)
T TIGR03708 37 AGFPVIILIEGWDGAGKGETINLLNEWMDPRGIETHAFGRPS 78 (493)
T ss_pred cCCeEEEEEeCCCCCChHHHHHHHHHHhCcCccEEEeCCCCC
Confidence 45789999999866533 334788889999999999998875
No 380
>TIGR02477 PFKA_PPi diphosphate--fructose-6-phosphate 1-phosphotransferase. Diphosphate--fructose-6-phosphate 1-phosphotransferase catalyzes the addition of phosphate from diphosphate (PPi) to fructose 6-phosphate to give fructose 1,6-bisphosphate (EC 2.7.1.90). The enzyme is also known as pyrophosphate-dependent phosphofructokinase. The usage of PPi-dependent enzymes in glycolysis presumably frees up ATP for other processes. TIGR02482 represents the ATP-dependent 6-phosphofructokinase enzyme contained within Pfam pfam00365: Phosphofructokinase. This model hits primarily bacterial, plant alpha, and plant beta sequences.
Probab=26.79 E-value=2.8e+02 Score=25.82 Aligned_cols=95 Identities=13% Similarity=0.083 Sum_probs=45.8
Q ss_pred eEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCC---CccccchhhHHHHHHHHHHHHHhhhccCCccE
Q 018375 43 AVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGA---RCYIKKFENIVNDCDDFFKSVCAQEEYTDKAR 119 (357)
Q Consensus 43 p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~---~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v 119 (357)
-.+|++-|-++.. .- ..+++++.+.|+.+-++-.|..-+.+-. .+....++..++-+.++++.+........+.+
T Consensus 163 d~LviIGGdgS~~-~A-~~Lae~~~~~g~~i~VIGIPkTIDNDl~~~~td~s~GFdTA~~~~~~~I~~i~~Da~s~~~~~ 240 (539)
T TIGR02477 163 DGLVIIGGDDSNT-NA-ALLAEYFAKHGLKTQVIGVPKTIDGDLKNQFIETSFGFDTACKIYSELIGNICRDALSAKKYW 240 (539)
T ss_pred CEEEEeCCchHHH-HH-HHHHHHHHhcCCCceEEEEeeeecCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHhcCCcE
Confidence 3577776655442 22 4677788777744433333332222211 11112455666666666666522111112333
Q ss_pred E---EEEeChhHHHHHHHH-hcCCC
Q 018375 120 F---LYGESMGGAVTLLLH-KKDPS 140 (357)
Q Consensus 120 ~---lvG~S~Gg~~a~~~a-~~~p~ 140 (357)
+ ++|-+.| ++|+..+ +..|+
T Consensus 241 ~~VevMGR~aG-~LAl~~aLat~~~ 264 (539)
T TIGR02477 241 HFIRLMGRSAS-HIALECALQTHPN 264 (539)
T ss_pred EEEEECCCCcH-HHHHHHHHhcCCC
Confidence 3 6676655 5665555 34444
No 381
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=26.54 E-value=3.3e+02 Score=24.30 Aligned_cols=67 Identities=27% Similarity=0.410 Sum_probs=45.9
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCC
Q 018375 60 RECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDP 139 (357)
Q Consensus 60 ~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p 139 (357)
+..+..|.+.|..|++.- | . +.+++...+..++++. +.++-+++ .-||.++..+...+|
T Consensus 75 d~vaa~l~~~gi~v~a~~--~--~---------~~~~y~~~~~~~l~~~------~~~p~~i~--DdGg~~~~~~~~~~~ 133 (413)
T cd00401 75 DHAAAAIAAAGIPVFAWK--G--E---------TLEEYWWCIEQALKFP------DGEPNMIL--DDGGDLTLLIHKKHP 133 (413)
T ss_pred HHHHHHHHhcCceEEEEc--C--C---------CHHHHHHHHHHHHhcc------CCCCcEEE--ecchHHHHHHHhhhh
Confidence 688899999899988863 2 1 5566666777777764 33455555 778998888877777
Q ss_pred CcccEEEE
Q 018375 140 SFWNGAVL 147 (357)
Q Consensus 140 ~~v~~~vl 147 (357)
+....++-
T Consensus 134 ~~~~~~~G 141 (413)
T cd00401 134 ELLPGIRG 141 (413)
T ss_pred hhhhccEE
Confidence 65444443
No 382
>PRK10673 acyl-CoA esterase; Provisional
Probab=26.43 E-value=3e+02 Score=21.88 Aligned_cols=63 Identities=21% Similarity=0.233 Sum_probs=36.6
Q ss_pred cccEEEEeeCCCccCChHHHHHHHHHccCCCceEEEcCCCCcccccCCCChhhhhHHHHHHHHHHHh
Q 018375 234 MIPFFVLHGEADTVTDPEVSKALYERASSRDKTIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDER 300 (357)
Q Consensus 234 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~ 300 (357)
..|++++||..+.... -..+...+.. +..++.++--||......+........+.+.++++..
T Consensus 16 ~~~iv~lhG~~~~~~~---~~~~~~~l~~-~~~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~~l~~l 78 (255)
T PRK10673 16 NSPIVLVHGLFGSLDN---LGVLARDLVN-DHDIIQVDMRNHGLSPRDPVMNYPAMAQDLLDTLDAL 78 (255)
T ss_pred CCCEEEECCCCCchhH---HHHHHHHHhh-CCeEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHc
Confidence 4689999997665422 2234444432 5677777666665332222223455777788888753
No 383
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=26.17 E-value=1.2e+02 Score=24.71 Aligned_cols=22 Identities=27% Similarity=0.463 Sum_probs=18.4
Q ss_pred cEEEEEeChhHHHHHHHHhcCC
Q 018375 118 ARFLYGESMGGAVTLLLHKKDP 139 (357)
Q Consensus 118 ~v~lvG~S~Gg~~a~~~a~~~p 139 (357)
.-.++|-|.|+.++..++...+
T Consensus 33 ~~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 33 ARMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred CCEEEEEcHHHHHHHHHHhCCC
Confidence 3469999999999999987654
No 384
>PRK11460 putative hydrolase; Provisional
Probab=26.08 E-value=2.8e+02 Score=22.18 Aligned_cols=41 Identities=22% Similarity=0.065 Sum_probs=25.9
Q ss_pred ceEEEEEccCCccccc--cHHHHHHHHhhCCcEEEEeCCCCCc
Q 018375 42 KAVVFLCHGYGMECSG--FMRECGTRLASAGYAVFGIDYEGHG 82 (357)
Q Consensus 42 ~p~vv~lHG~~~~~~~--~~~~~~~~l~~~G~~vi~~d~~G~G 82 (357)
.++|+++||--...-. +...+.+.|.+.|..+-...++|.|
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~g 190 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLG 190 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCC
Confidence 5568999997655332 2346667777777766555555444
No 385
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=25.93 E-value=3.1e+02 Score=21.18 Aligned_cols=93 Identities=17% Similarity=0.144 Sum_probs=49.8
Q ss_pred EEEEEccCCcccccc---HHHHHHHHhhCCcEEEEeCCCCCc-cCCCC----------CccccchhhHHHHHHHHHHHHH
Q 018375 44 VVFLCHGYGMECSGF---MRECGTRLASAGYAVFGIDYEGHG-RSRGA----------RCYIKKFENIVNDCDDFFKSVC 109 (357)
Q Consensus 44 ~vv~lHG~~~~~~~~---~~~~~~~l~~~G~~vi~~d~~G~G-~s~~~----------~~~~~~~~~~~~d~~~~l~~l~ 109 (357)
.||=..|.+..-..| -+.++..+.++|+.|.++-..... ..... .......+...-|+.+++..+.
T Consensus 5 aIiGtrGIPa~YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~~~~~~~~y~gv~l~~i~~~~~g~~~si~yd~~sl~~al~ 84 (185)
T PF09314_consen 5 AIIGTRGIPARYGGFETFVEELAPRLVSKGIDVTVYCRSDYYPYKEFEYNGVRLVYIPAPKNGSAESIIYDFLSLLHALR 84 (185)
T ss_pred EEEeCCCCCcccCcHHHHHHHHHHHHhcCCceEEEEEccCCCCCCCcccCCeEEEEeCCCCCCchHHHHHHHHHHHHHHH
Confidence 355555666544433 345556666667776665443222 11110 1111135666777777777663
Q ss_pred h-h-hccCCccEEEEEeChhHHHHHHHHh
Q 018375 110 A-Q-EEYTDKARFLYGESMGGAVTLLLHK 136 (357)
Q Consensus 110 ~-~-~~~~~~~v~lvG~S~Gg~~a~~~a~ 136 (357)
. + .....+-+.+.|.+.|+.+...+-.
T Consensus 85 ~~~~~~~~~~ii~ilg~~~g~~~~~~~r~ 113 (185)
T PF09314_consen 85 FIKQDKIKYDIILILGYGIGPFFLPFLRK 113 (185)
T ss_pred HHhhccccCCEEEEEcCCccHHHHHHHHh
Confidence 1 1 1112345678899989887766643
No 386
>TIGR02690 resist_ArsH arsenical resistance protein ArsH. Members of this protein family occur in arsenate resistance operons that include at least two different types of arsenate reductase. ArsH is not required for arsenate resistance in some systems. This family belongs to the larger family of NADPH-dependent FMN reductases (Pfam model pfam03358). The function of ArsH is not known.
Probab=25.76 E-value=3.5e+02 Score=21.63 Aligned_cols=38 Identities=24% Similarity=0.102 Sum_probs=20.4
Q ss_pred eEEEEEccCCcccccc---HHHHHHHHhhCCcEEEEeCCCC
Q 018375 43 AVVFLCHGYGMECSGF---MRECGTRLASAGYAVFGIDYEG 80 (357)
Q Consensus 43 p~vv~lHG~~~~~~~~---~~~~~~~l~~~G~~vi~~d~~G 80 (357)
+-|+.+-|..-..+.- .+.+.+.+.+.|+.+-.+|++.
T Consensus 27 ~kI~~I~GSlR~~S~n~~la~~~~~~~~~~g~~v~~idl~~ 67 (219)
T TIGR02690 27 PRILLLYGSLRERSYSRLLAEEAARLLGCEGRETRIFDPPG 67 (219)
T ss_pred CEEEEEECCCCCcchHHHHHHHHHHHHhhcCCEEEEeCccc
Confidence 4567776654322211 1233344444688888887653
No 387
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=25.75 E-value=1.7e+02 Score=22.23 Aligned_cols=53 Identities=13% Similarity=0.232 Sum_probs=33.4
Q ss_pred HhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChh
Q 018375 66 LASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMG 127 (357)
Q Consensus 66 l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~G 127 (357)
|.+.|+..+.+|.=+.=..... .+...++.+.++.+++. ++.+++.|+--|.|
T Consensus 36 Lk~~Gik~li~DkDNTL~~~~~-------~~i~~~~~~~~~~l~~~--~~~~~v~IvSNsaG 88 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPPYE-------DEIPPEYAEWLNELKKQ--FGKDRVLIVSNSAG 88 (168)
T ss_pred hhhcCceEEEEcCCCCCCCCCc-------CcCCHHHHHHHHHHHHH--CCCCeEEEEECCCC
Confidence 7888999999998665322211 22233455556666332 24458999999986
No 388
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=25.74 E-value=2.3e+02 Score=19.57 Aligned_cols=74 Identities=11% Similarity=0.163 Sum_probs=44.4
Q ss_pred EEEEEccCCccccccHHHHHHHHhhC-CcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEEEE
Q 018375 44 VVFLCHGYGMECSGFMRECGTRLASA-GYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLY 122 (357)
Q Consensus 44 ~vv~lHG~~~~~~~~~~~~~~~l~~~-G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lv 122 (357)
.||.-||... ... ...++.+... --.+.++++.-. .+.++..+.+.+.++.+. ..+.+.++
T Consensus 2 iii~sHG~~A--~g~-~~~~~~i~G~~~~~i~~~~~~~~----------~~~~~~~~~l~~~i~~~~-----~~~~vlil 63 (116)
T PF03610_consen 2 IIIASHGSLA--EGL-LESAEMILGEDQDNIEAVDLYPD----------ESIEDFEEKLEEAIEELD-----EGDGVLIL 63 (116)
T ss_dssp EEEEEETTHH--HHH-HHHHHHHHTSTCSSEEEEEETTT----------SCHHHHHHHHHHHHHHCC-----TTSEEEEE
T ss_pred EEEEECcHHH--HHH-HHHHHHHcCCCcccEEEEECcCC----------CCHHHHHHHHHHHHHhcc-----CCCcEEEE
Confidence 5888999332 233 4555665554 235666664321 267777888888887661 25667777
Q ss_pred EeChhHHHHHHHH
Q 018375 123 GESMGGAVTLLLH 135 (357)
Q Consensus 123 G~S~Gg~~a~~~a 135 (357)
.-=.||.....++
T Consensus 64 ~Dl~ggsp~n~a~ 76 (116)
T PF03610_consen 64 TDLGGGSPFNEAA 76 (116)
T ss_dssp ESSTTSHHHHHHH
T ss_pred eeCCCCccchHHH
Confidence 7777766544443
No 389
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=25.72 E-value=1.2e+02 Score=19.50 Aligned_cols=22 Identities=27% Similarity=0.312 Sum_probs=17.7
Q ss_pred cccHHHHHHHHhhCCcEEEEeC
Q 018375 56 SGFMRECGTRLASAGYAVFGID 77 (357)
Q Consensus 56 ~~~~~~~~~~l~~~G~~vi~~d 77 (357)
...-..++..|++.|+.|+.+|
T Consensus 13 tt~~~~l~~~l~~~g~~v~~~~ 34 (99)
T cd01983 13 TTLAANLAAALAKRGKRVLLID 34 (99)
T ss_pred HHHHHHHHHHHHHCCCeEEEEC
Confidence 3444678888988899999999
No 390
>PTZ00445 p36-lilke protein; Provisional
Probab=25.71 E-value=2.6e+02 Score=22.27 Aligned_cols=64 Identities=14% Similarity=0.053 Sum_probs=37.0
Q ss_pred HHHHHHHhhCCcEEEEeCCCCC------ccCCCCC-ccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChh
Q 018375 60 RECGTRLASAGYAVFGIDYEGH------GRSRGAR-CYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMG 127 (357)
Q Consensus 60 ~~~~~~l~~~G~~vi~~d~~G~------G~s~~~~-~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~G 127 (357)
..+.+.|.+.|+.+++.|+=.. |....+. ....-......++..++..+.+ ..=++.||-+|--
T Consensus 32 ~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~----~~I~v~VVTfSd~ 102 (219)
T PTZ00445 32 DKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKN----SNIKISVVTFSDK 102 (219)
T ss_pred HHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHH----CCCeEEEEEccch
Confidence 5678889999999999998532 1111111 0000111223456666666643 2457888888854
No 391
>COG1832 Predicted CoA-binding protein [General function prediction only]
Probab=25.65 E-value=1.8e+02 Score=21.19 Aligned_cols=34 Identities=15% Similarity=0.129 Sum_probs=23.6
Q ss_pred EEEccCCccccccHHHHHHHHhhCCcEEEEeCCC
Q 018375 46 FLCHGYGMECSGFMRECGTRLASAGYAVFGIDYE 79 (357)
Q Consensus 46 v~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~ 79 (357)
|-+=|...+....-..+.++|.++||+|+-++..
T Consensus 19 IAvVG~S~~P~r~sy~V~kyL~~~GY~ViPVNP~ 52 (140)
T COG1832 19 IAVVGASDKPDRPSYRVAKYLQQKGYRVIPVNPK 52 (140)
T ss_pred EEEEecCCCCCccHHHHHHHHHHCCCEEEeeCcc
Confidence 3344555554444457889999999999998853
No 392
>cd05005 SIS_PHI Hexulose-6-phosphate isomerase (PHI). PHI is a member of the SIS (Sugar ISomerase domain) superfamily. In the ribulose monophosphate pathway of formaldehyde fixation, hexulose-6-phosphate synthase catalyzes the condensation of ribulose-5-phosphate with formadelhyde to become hexulose-6-phosphate, which is then isomerized to fructose-6-phosphate by PHI.
Probab=25.63 E-value=2.7e+02 Score=21.05 Aligned_cols=81 Identities=9% Similarity=-0.020 Sum_probs=40.0
Q ss_pred EEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCC-CccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEe
Q 018375 46 FLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGA-RCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGE 124 (357)
Q Consensus 46 v~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~-~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~ 124 (357)
|++-|.|.+...- ..+...|...|..+..++-......... .-...+......++..+++..+++ .-+++.+--
T Consensus 36 I~i~G~G~S~~~A-~~~~~~l~~~g~~~~~~~~~~~~~~~~~D~vI~iS~sG~t~~~i~~~~~ak~~----g~~iI~IT~ 110 (179)
T cd05005 36 IFVYGAGRSGLVA-KAFAMRLMHLGLNVYVVGETTTPAIGPGDLLIAISGSGETSSVVNAAEKAKKA----GAKVVLITS 110 (179)
T ss_pred EEEEecChhHHHH-HHHHHHHHhCCCeEEEeCCCCCCCCCCCCEEEEEcCCCCcHHHHHHHHHHHHC----CCeEEEEEC
Confidence 5666777663332 4566667667888877643221100000 001123444455666666666442 345555554
Q ss_pred ChhHHHH
Q 018375 125 SMGGAVT 131 (357)
Q Consensus 125 S~Gg~~a 131 (357)
+-++.++
T Consensus 111 ~~~s~la 117 (179)
T cd05005 111 NPDSPLA 117 (179)
T ss_pred CCCCchH
Confidence 4454443
No 393
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=25.57 E-value=3e+02 Score=23.92 Aligned_cols=59 Identities=19% Similarity=0.173 Sum_probs=33.6
Q ss_pred ceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHH
Q 018375 42 KAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSV 108 (357)
Q Consensus 42 ~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l 108 (357)
..+||.+-|.-.| .--+..|.++||.|+.+-+..+....... ....+..+|+..+.+.|
T Consensus 4 ~kV~v~mSGGVDS-----SVaA~lLk~QGyeViGl~m~~~~~~~~~~---C~s~~d~~da~~va~~L 62 (356)
T COG0482 4 KKVLVGMSGGVDS-----SVAAYLLKEQGYEVIGLFMKNWDEDGGGG---CCSEEDLRDAERVADQL 62 (356)
T ss_pred cEEEEEccCCHHH-----HHHHHHHHHcCCeEEEEEEEeeccCCCCc---CCchhHHHHHHHHHHHh
Confidence 3456666664333 12345677889999999888766421111 12334455666666655
No 394
>PTZ00317 NADP-dependent malic enzyme; Provisional
Probab=25.51 E-value=1.3e+02 Score=27.93 Aligned_cols=79 Identities=20% Similarity=0.222 Sum_probs=41.7
Q ss_pred EEEEccCCccccccHHHHHHHHhhCCc-------EEEEeCCCCCccCCCCCccccchhhH-----------HHHHHHHHH
Q 018375 45 VFLCHGYGMECSGFMRECGTRLASAGY-------AVFGIDYEGHGRSRGARCYIKKFENI-----------VNDCDDFFK 106 (357)
Q Consensus 45 vv~lHG~~~~~~~~~~~~~~~l~~~G~-------~vi~~d~~G~G~s~~~~~~~~~~~~~-----------~~d~~~~l~ 106 (357)
-|++-|.|...-..-+.+...+.+.|. +++.+|..|-=..+........-..+ ..++.++++
T Consensus 299 riv~~GAGsAgiGia~ll~~~m~~~Gls~eeA~~~i~~vD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~~~~~~L~e~v~ 378 (559)
T PTZ00317 299 RIVFFGAGSAAIGVANNIADLAAEYGVTREEALKSFYLVDSKGLVTTTRGDKLAKHKVPFARTDISAEDSSLKTLEDVVR 378 (559)
T ss_pred EEEEECCCHHHHHHHHHHHHHHHHcCCChhHhcCeEEEEcCCCeEeCCCCccccHHHHHHhccccccccccCCCHHHHHh
Confidence 344555554332222455566666777 89999999853332211000001111 124555554
Q ss_pred HHHhhhccCCccEEEEEeCh-hHHHH
Q 018375 107 SVCAQEEYTDKARFLYGESM-GGAVT 131 (357)
Q Consensus 107 ~l~~~~~~~~~~v~lvG~S~-Gg~~a 131 (357)
. .++-+|+|-|- ||...
T Consensus 379 ~--------~KPtvLIG~S~~~g~Ft 396 (559)
T PTZ00317 379 F--------VKPTALLGLSGVGGVFT 396 (559)
T ss_pred c--------cCCCEEEEecCCCCCCC
Confidence 3 46789999996 66543
No 395
>PF06833 MdcE: Malonate decarboxylase gamma subunit (MdcE); InterPro: IPR009648 This family consists of several bacterial malonate decarboxylase gamma subunit proteins. Malonate decarboxylase of Klebsiella pneumoniae consists of four different subunits and catalyses the conversion of malonate plus H+ to acetate and CO2. The catalysis proceeds via acetyl and malonyl thioester residues with the phosphribosyl-dephospho-CoA prosthetic group of the acyl carrier protein (ACP) subunit. MdcD and E together probably function as malonyl-S-ACP decarboxylase []. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.
Probab=25.10 E-value=1.8e+02 Score=23.46 Aligned_cols=60 Identities=15% Similarity=0.181 Sum_probs=35.9
Q ss_pred cEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEE--EEEeChhHH-HHHHHHh
Q 018375 71 YAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARF--LYGESMGGA-VTLLLHK 136 (357)
Q Consensus 71 ~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~--lvG~S~Gg~-~a~~~a~ 136 (357)
=-|+.+|-+|...+....- ..+.....-+...+...+. ...+++ |+|++++|. ++.-+.+
T Consensus 66 pIv~lVD~~sQa~grreEl--lGi~~alAhla~a~a~AR~----~GHpvI~Lv~G~A~SGaFLA~GlqA 128 (234)
T PF06833_consen 66 PIVALVDVPSQAYGRREEL--LGINQALAHLAKAYALARL----AGHPVIGLVYGKAMSGAFLAHGLQA 128 (234)
T ss_pred CEEEEEeCCccccchHHHH--hhHHHHHHHHHHHHHHHHH----cCCCeEEEEecccccHHHHHHHHHh
Confidence 4688899998766643321 2445555555555555533 244555 889998776 5555543
No 396
>KOG2805 consensus tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Translation, ribosomal structure and biogenesis]
Probab=24.94 E-value=3.4e+02 Score=23.08 Aligned_cols=61 Identities=23% Similarity=0.118 Sum_probs=33.6
Q ss_pred ceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHH
Q 018375 42 KAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSV 108 (357)
Q Consensus 42 ~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l 108 (357)
..+||.+-|.-.+ . --+..|+.+||.|..+=++.. .+.-........+...+|+..+.++|
T Consensus 6 ~~VvvamSgGVDS-s----Vaa~Ll~~~g~~v~gv~M~nW-d~~de~~s~cp~e~D~~da~~Vc~~L 66 (377)
T KOG2805|consen 6 DRVVVAMSGGVDS-S----VAARLLAARGYNVTGVFMKNW-DSLDEFGSQCPAERDWKDAKRVCKQL 66 (377)
T ss_pred ceEEEEecCCchH-H----HHHHHHHhcCCCeeEEeeecc-ccccccccCCCchhhHHHHHHHHHHh
Confidence 3456666654332 2 224567788999998888776 22211111124455556666666665
No 397
>cd00765 Pyrophosphate_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include pyrophosphate-dependent phosphofructokinases. These are found in bacteria as well as plants. These may be dimeric nonallosteric enzymes as in bacteria or allosteric heterotetramers as in plants.
Probab=24.74 E-value=3.8e+02 Score=25.07 Aligned_cols=95 Identities=15% Similarity=0.073 Sum_probs=47.4
Q ss_pred eEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCC---ccccchhhHHHHHHHHHHHHHhhhccCCccE
Q 018375 43 AVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGAR---CYIKKFENIVNDCDDFFKSVCAQEEYTDKAR 119 (357)
Q Consensus 43 p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~---~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v 119 (357)
-.+|++-|-++.. .- ..+++++.+.|+.+-++-.|..-+.+-.. .....++..++-+.+++..+........+++
T Consensus 168 d~LviIGGddS~~-~A-~~Lae~~~~~g~~i~VIGVPKTIDNDl~~t~id~s~GFdTA~k~~a~~I~ni~~Da~s~~~~~ 245 (550)
T cd00765 168 DALVVIGGDDSNT-NA-ALLAENFRSKGLKTRVIGVPKTIDGDLKNKEIETSFGFDTATKIYSELIGNVMRDARSTGKYW 245 (550)
T ss_pred CEEEEeCCchHHH-HH-HHHHHHHHhcCCCceEEEEeeeecCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCCcE
Confidence 3577776655432 22 46777787788544444334433222211 1122556666666666666642111112222
Q ss_pred ---EEEEeChhHHHHHHHH-hcCCC
Q 018375 120 ---FLYGESMGGAVTLLLH-KKDPS 140 (357)
Q Consensus 120 ---~lvG~S~Gg~~a~~~a-~~~p~ 140 (357)
=++|.+.| ++|+..+ +..|+
T Consensus 246 ~~VEvMGR~aG-~LAl~~aLat~p~ 269 (550)
T cd00765 246 HFVKLMGRSAS-HIALECALKTHPN 269 (550)
T ss_pred EEEEeCCCchH-HHHHHHHHhcCCC
Confidence 27788755 5555554 44444
No 398
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=24.73 E-value=1.1e+02 Score=21.41 Aligned_cols=31 Identities=23% Similarity=0.270 Sum_probs=23.4
Q ss_pred cEEEEE-eChhHHHHHHHHhcCCCcccEEEEec
Q 018375 118 ARFLYG-ESMGGAVTLLLHKKDPSFWNGAVLVA 149 (357)
Q Consensus 118 ~v~lvG-~S~Gg~~a~~~a~~~p~~v~~~vl~~ 149 (357)
++.|+| ..+.|...+.+...+|+ +.-+.+.+
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~-~e~~~~~~ 32 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPD-FELVALVS 32 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTST-EEEEEEEE
T ss_pred CEEEECCCCHHHHHHHHHHhcCCC-ccEEEeee
Confidence 578999 88999988888888886 55444444
No 399
>TIGR01626 ytfJ_HI0045 conserved hypothetical protein YtfJ-family, TIGR01626. This model represents sequences from gamma proteobacteria that are related to the E. coli protein, YtfJ.
Probab=24.68 E-value=2.2e+02 Score=21.98 Aligned_cols=51 Identities=14% Similarity=0.021 Sum_probs=34.4
Q ss_pred CCcEEEEEEEcCCC--CCceEEEEEccCCccccccHHHHHHHHhhCCcEE------EEeC
Q 018375 26 RGVQLFTCRWLPFS--TPKAVVFLCHGYGMECSGFMRECGTRLASAGYAV------FGID 77 (357)
Q Consensus 26 ~g~~l~~~~~~p~~--~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~v------i~~d 77 (357)
+|..+.|.-|...+ ++.-.|-++-||....+.. .++...|.++|+.+ +.++
T Consensus 43 ~~~~~~y~~~~~~~l~GKV~lvn~~Aswc~~c~~e-~P~l~~l~~~~~~~~~y~~t~~IN 101 (184)
T TIGR01626 43 SGKDTVYQPWGSAELAGKVRVVHHIAGRTSAKEXN-ASLIDAIKAAKFPPVKYQTTTIIN 101 (184)
T ss_pred cCCcccceeccHHHcCCCEEEEEEEecCCChhhcc-chHHHHHHHcCCCcccccceEEEE
Confidence 56788888887622 2333445555676665555 68888898888887 6665
No 400
>cd01521 RHOD_PspE2 Member of the Rhodanese Homology Domain superfamily. This CD includes the putative rhodanese-like protein, Psp2, of Yersinia pestis biovar Medievalis and other similar uncharacterized proteins.
Probab=24.59 E-value=2e+02 Score=19.50 Aligned_cols=35 Identities=26% Similarity=0.383 Sum_probs=20.6
Q ss_pred CCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeC
Q 018375 40 TPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGID 77 (357)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d 77 (357)
...++||++.+.... .....+..|...||.|..++
T Consensus 63 ~~~~vvvyc~~g~~~---~s~~~a~~l~~~G~~v~~l~ 97 (110)
T cd01521 63 KEKLFVVYCDGPGCN---GATKAALKLAELGFPVKEMI 97 (110)
T ss_pred CCCeEEEEECCCCCc---hHHHHHHHHHHcCCeEEEec
Confidence 346667777543211 11456677778899866553
No 401
>KOG0855 consensus Alkyl hydroperoxide reductase, thiol specific antioxidant and related enzymes [Posttranslational modification, protein turnover, chaperones]
Probab=24.58 E-value=2.8e+02 Score=20.95 Aligned_cols=57 Identities=19% Similarity=0.271 Sum_probs=37.0
Q ss_pred eeeeeEEecCCcEEEEEEEcCCCCCceEEEEEccCCccc------cccHHHHHHHHhhCCcEEEEeC
Q 018375 17 YQEEYIRNARGVQLFTCRWLPFSTPKAVVFLCHGYGMEC------SGFMRECGTRLASAGYAVFGID 77 (357)
Q Consensus 17 ~~~~~~~~~~g~~l~~~~~~p~~~~~p~vv~lHG~~~~~------~~~~~~~~~~l~~~G~~vi~~d 77 (357)
.-+..+.+.||..|...-+. +.+|+|+|+..-.... -.| +.-.+.|...|+.|+.+.
T Consensus 69 iPD~tL~dedg~sisLkkit---~nk~vV~f~YP~asTPGCTkQaCgF-RDnY~k~kka~aeV~GlS 131 (211)
T KOG0855|consen 69 IPDFTLKDEDGKSISLKKIT---GNKPVVLFFYPAASTPGCTKQACGF-RDNYEKFKKAGAEVIGLS 131 (211)
T ss_pred CCCcccccCCCCeeeeeeec---CCCcEEEEEeccCCCCCcccccccc-cccHHHHhhcCceEEeec
Confidence 34456677788888887762 3458888876643321 123 455577777789998764
No 402
>PF03358 FMN_red: NADPH-dependent FMN reductase; InterPro: IPR005025 NADPH-dependent FMN reductase (1.5.1.29 from EC) reduces FMN and also reduces riboflavin and FAD, although more slowly. Members of this entry catalyse the reaction NAD(P)H + FMN = NAD(P)(+) + FMNH(2).; PDB: 3SVL_B 3GFS_F 3GFQ_A 1NNI_1 2GSW_B 3GFR_D 1T0I_B 3D7N_A 2R97_A 3B6K_A ....
Probab=24.58 E-value=50 Score=24.14 Aligned_cols=37 Identities=19% Similarity=0.235 Sum_probs=24.6
Q ss_pred EEEEccCCc---cccccHHHHHHHHhhCCcEEEEeCCCCC
Q 018375 45 VFLCHGYGM---ECSGFMRECGTRLASAGYAVFGIDYEGH 81 (357)
Q Consensus 45 vv~lHG~~~---~~~~~~~~~~~~l~~~G~~vi~~d~~G~ 81 (357)
|+++.|... +.....+.+.+.+.+.|+.+-.+|+..+
T Consensus 3 ilii~gS~r~~~~t~~l~~~~~~~l~~~g~e~~~i~l~~~ 42 (152)
T PF03358_consen 3 ILIINGSPRKNSNTRKLAEAVAEQLEEAGAEVEVIDLADY 42 (152)
T ss_dssp EEEEESSSSTTSHHHHHHHHHHHHHHHTTEEEEEEECTTS
T ss_pred EEEEECcCCCCCHHHHHHHHHHHHHHHcCCEEEEEecccc
Confidence 667777652 2233345566677677899999998876
No 403
>COG5441 Uncharacterized conserved protein [Function unknown]
Probab=24.22 E-value=4.4e+02 Score=22.26 Aligned_cols=100 Identities=11% Similarity=0.015 Sum_probs=59.1
Q ss_pred EEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCcc---------------c----cchhhHHHHHHHHH
Q 018375 45 VFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCY---------------I----KKFENIVNDCDDFF 105 (357)
Q Consensus 45 vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~---------------~----~~~~~~~~d~~~~l 105 (357)
.|++-|.+.....-...+++.....|-.++.+|.--.+........ . ..-...+.-..++.
T Consensus 4 rIyVvgT~DTKg~EL~ylad~I~~aG~~~v~vDvs~~~~~~~~~dis~~~VA~~hp~~~qAv~~~~Drg~AiaaMa~A~~ 83 (401)
T COG5441 4 RIYVVGTADTKGEELAYLADLIEAAGGSPVLVDVSTLRNPTSEVDISAEDVAGAHPGGRQAVLDGNDRGSAIAAMAEAFV 83 (401)
T ss_pred eEEEEecCCCcchhHHHHHHHHHHcCCCeEEEEeeccCCCCCCcccCHHHHhhhCCCcceeEeccCchhHHHHHHHHHHH
Confidence 5677777776665556777778888999999997543222111100 0 00111222333555
Q ss_pred HHHHhhhccCCccEEEEEeChhHHHHHHHHhcCCCcccEEE
Q 018375 106 KSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDPSFWNGAV 146 (357)
Q Consensus 106 ~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p~~v~~~v 146 (357)
+.+..+. +..-++-+|-|.|..+++..+...|--+-+++
T Consensus 84 r~l~sR~--dV~gmig~GGsgGT~lit~~m~~LPlgvPK~m 122 (401)
T COG5441 84 RFLSSRG--DVAGMIGMGGSGGTALITPAMRRLPLGVPKVM 122 (401)
T ss_pred HHhhccc--chhheeecCCCcchHhhhhHHHhcCcCCccee
Confidence 5554332 34557788889999888888888775444443
No 404
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=24.19 E-value=4.2e+02 Score=21.99 Aligned_cols=73 Identities=15% Similarity=0.112 Sum_probs=36.6
Q ss_pred hhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcCC--CcccE
Q 018375 67 ASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKDP--SFWNG 144 (357)
Q Consensus 67 ~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~p--~~v~~ 144 (357)
...+|.++.+|-+|.... -....+++..+.+............+++|--+.-|.-++..+..+- -.+.+
T Consensus 151 ~~~~~D~ViIDT~G~~~~---------d~~~~~el~~~~~~~~~~~~~~~~~~~LVl~a~~~~~~~~~~~~f~~~~~~~g 221 (272)
T TIGR00064 151 KARNIDVVLIDTAGRLQN---------KVNLMDELKKIKRVIKKVDKDAPDEVLLVLDATTGQNALEQAKVFNEAVGLTG 221 (272)
T ss_pred HHCCCCEEEEeCCCCCcc---------hHHHHHHHHHHHHHHhcccCCCCceEEEEEECCCCHHHHHHHHHHHhhCCCCE
Confidence 346799999999987542 1233445555554442111111344555544444444444333221 13566
Q ss_pred EEEe
Q 018375 145 AVLV 148 (357)
Q Consensus 145 ~vl~ 148 (357)
+|+.
T Consensus 222 ~IlT 225 (272)
T TIGR00064 222 IILT 225 (272)
T ss_pred EEEE
Confidence 6664
No 405
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=24.12 E-value=2e+02 Score=21.39 Aligned_cols=52 Identities=19% Similarity=0.290 Sum_probs=32.6
Q ss_pred ecCCcEEEEEEEcCC---CCCceEEEEEccCCccccc-------------------cHHHHHHHHhhCCcEEEE
Q 018375 24 NARGVQLFTCRWLPF---STPKAVVFLCHGYGMECSG-------------------FMRECGTRLASAGYAVFG 75 (357)
Q Consensus 24 ~~~g~~l~~~~~~p~---~~~~p~vv~lHG~~~~~~~-------------------~~~~~~~~l~~~G~~vi~ 75 (357)
..+|.+|-|+.|.|. .=...-+|+-|+..++.-. --..++..|++.||-.++
T Consensus 59 k~~gl~id~y~f~psl~e~I~~AdlVIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~egyL~~C 132 (170)
T KOG3349|consen 59 KNGGLTIDGYDFSPSLTEDIRSADLVISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAEEGYLYYC 132 (170)
T ss_pred ccCCeEEEEEecCccHHHHHhhccEEEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHhcCcEEEe
Confidence 346788999999882 1112447888876654110 013577888888886655
No 406
>PLN02735 carbamoyl-phosphate synthase
Probab=24.12 E-value=3.6e+02 Score=27.87 Aligned_cols=67 Identities=16% Similarity=0.121 Sum_probs=37.5
Q ss_pred HHHHHHhhCCcEEEEeCCCCCccCCCC--CccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHh
Q 018375 61 ECGTRLASAGYAVFGIDYEGHGRSRGA--RCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHK 136 (357)
Q Consensus 61 ~~~~~l~~~G~~vi~~d~~G~G~s~~~--~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~ 136 (357)
..+..|.+.|+.++++|.-..--|... .+..+-..-..+++.++++.. +.+ .++ -++||..++.++.
T Consensus 599 ~~~~alr~~G~~tI~v~~npetvstd~~~aD~~y~~pl~~e~vl~i~~~e------~~d-~Vi--~~~Ggq~~l~la~ 667 (1102)
T PLN02735 599 HASFALQDAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLE------RPD-GII--VQFGGQTPLKLAL 667 (1102)
T ss_pred HHHHHHHHcCCeEEEEeCCCccccCCcccCCeEEEEeCCHHHHHHHHHHh------CCC-EEE--ECCCchHHHHHHH
Confidence 567888899999999987654433211 111112222356666666655 232 233 2567766666554
No 407
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=23.93 E-value=1.3e+02 Score=18.89 Aligned_cols=32 Identities=9% Similarity=-0.057 Sum_probs=15.3
Q ss_pred cEEEEEeChhHHHHHHHHhcCCCcccEEEEecccc
Q 018375 118 ARFLYGESMGGAVTLLLHKKDPSFWNGAVLVAPMC 152 (357)
Q Consensus 118 ~v~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 152 (357)
+++++|-+.-|.-....+.... ..+.++....
T Consensus 1 ~vvViGgG~ig~E~A~~l~~~g---~~vtli~~~~ 32 (80)
T PF00070_consen 1 RVVVIGGGFIGIELAEALAELG---KEVTLIERSD 32 (80)
T ss_dssp EEEEESSSHHHHHHHHHHHHTT---SEEEEEESSS
T ss_pred CEEEECcCHHHHHHHHHHHHhC---cEEEEEeccc
Confidence 4678885555543322223322 4455554433
No 408
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=23.66 E-value=1.4e+02 Score=26.47 Aligned_cols=65 Identities=12% Similarity=0.193 Sum_probs=33.3
Q ss_pred cccEEEEeeCCCccCChHHHHHHHHHccCCCc--eEEEcCCCCcccccCCCChhhhhHHHHHHHHHHHh
Q 018375 234 MIPFFVLHGEADTVTDPEVSKALYERASSRDK--TIKLYPGMWHALTSGEPDENIDIVFGDIIAWLDER 300 (357)
Q Consensus 234 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~--~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~ 300 (357)
..|++++.|.-|.+-.. ....+.+.+...+. -.+-+||.|+...+.-.+ ..+.+.+.+++||.+.
T Consensus 189 p~P~VIv~gGlDs~qeD-~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~-D~~~l~~aVLd~L~~~ 255 (411)
T PF06500_consen 189 PYPTVIVCGGLDSLQED-LYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQ-DSSRLHQAVLDYLASR 255 (411)
T ss_dssp -EEEEEEE--TTS-GGG-GHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S--CCHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCcchhHHH-HHHHHHHHHHhCCCEEEEEccCCCcccccCCCCc-CHHHHHHHHHHHHhcC
Confidence 67999999999987642 22222222221244 444567888764322111 2344889999999874
No 409
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=23.57 E-value=4.4e+02 Score=22.04 Aligned_cols=98 Identities=14% Similarity=0.088 Sum_probs=47.8
Q ss_pred EccCCccccccHHHHHHHHhhCCcEEEE------eCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEEE
Q 018375 48 CHGYGMECSGFMRECGTRLASAGYAVFG------IDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFL 121 (357)
Q Consensus 48 lHG~~~~~~~~~~~~~~~l~~~G~~vi~------~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l 121 (357)
+||.-+++. -...+...|+.|.+ -+.+|||...+.... .++.+| +++.+.+......=..++
T Consensus 11 v~G~vGn~A-----A~f~lq~~G~~V~~vpTV~fSnHtgyg~~~g~v~~----~e~l~~---~l~~l~~~~~~~~~davl 78 (281)
T COG2240 11 VYGSVGNSA-----AIFPLQRLGLDVWAVPTVQFSNHTGYGKWTGIVMP----PEQLAD---LLNGLEAIDKLGECDAVL 78 (281)
T ss_pred eecccccHh-----HHHHHHHcCCceeeeceEEecCCCCCCCCCCcCCC----HHHHHH---HHHHHHhcccccccCEEE
Confidence 455555432 23345566776655 467888886654322 333333 333332211112334666
Q ss_pred EEeChhHHHH----HHHHhcCCCcccEEEEeccccccccc
Q 018375 122 YGESMGGAVT----LLLHKKDPSFWNGAVLVAPMCKISEK 157 (357)
Q Consensus 122 vG~S~Gg~~a----~~~a~~~p~~v~~~vl~~~~~~~~~~ 157 (357)
.|+=-.+... -.+.+.....-+.+++++|+......
T Consensus 79 tGYlgs~~qv~~i~~~v~~vk~~~P~~~~l~DPVMGD~gg 118 (281)
T COG2240 79 TGYLGSAEQVRAIAGIVKAVKEANPNALYLCDPVMGDPGG 118 (281)
T ss_pred EccCCCHHHHHHHHHHHHHHhccCCCeEEEeCCcccCCCc
Confidence 6663222222 22222112234578999998765553
No 410
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=23.31 E-value=87 Score=24.75 Aligned_cols=35 Identities=17% Similarity=0.283 Sum_probs=27.3
Q ss_pred EEEEEccCCcccc-ccHHHHHHHHhhCCcEEEEeCC
Q 018375 44 VVFLCHGYGMECS-GFMRECGTRLASAGYAVFGIDY 78 (357)
Q Consensus 44 ~vv~lHG~~~~~~-~~~~~~~~~l~~~G~~vi~~d~ 78 (357)
++|++.|.+++.. .+-..+++.|.+.+++|+...-
T Consensus 2 pLiIlTGyPgsGKTtfakeLak~L~~~i~~vi~l~k 37 (261)
T COG4088 2 PLIILTGYPGSGKTTFAKELAKELRQEIWRVIHLEK 37 (261)
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHhhhhccccch
Confidence 3788999988754 4557899999999888887654
No 411
>PF08497 Radical_SAM_N: Radical SAM N-terminal; InterPro: IPR013704 This domain tends to occur to the N terminus of PF04055 from PFAM radical SAM domain in hypothetical bacterial proteins. Proteins in this entry are radical SAM proteins, they catalyse diverse reactions, including unusual methylations, isomerization, sulphur insertion, ring formation, anaerobic oxidation and protein radical formation. Evidence exists that these proteins generate a radical species by reductive cleavage of S:-adenosylmethionine (SAM) through an unusual Fe-S centre [, ].
Probab=23.30 E-value=3.9e+02 Score=22.43 Aligned_cols=37 Identities=27% Similarity=0.077 Sum_probs=24.4
Q ss_pred EEEEEccCC--ccccccHHHHHHHHhhCCcEEEEeCCCC
Q 018375 44 VVFLCHGYG--MECSGFMRECGTRLASAGYAVFGIDYEG 80 (357)
Q Consensus 44 ~vv~lHG~~--~~~~~~~~~~~~~l~~~G~~vi~~d~~G 80 (357)
=|||+-|=. .+...-..-+...|.++||+|-.+-+|-
T Consensus 18 DvilVtGDAYVDHPsFG~AiIgR~Le~~GyrVgIiaQPd 56 (302)
T PF08497_consen 18 DVILVTGDAYVDHPSFGAAIIGRVLEAHGYRVGIIAQPD 56 (302)
T ss_pred cEEEEeCcccccCcchhHHHHHHHHHHcCCeEEEEeCCC
Confidence 377887732 2222223456678888899999998874
No 412
>cd03557 L-arabinose_isomerase L-Arabinose isomerase (AI) catalyzes the isomerization of L-arabinose to L-ribulose, the first reaction in its conversion into D-xylulose-5-phosphate, an intermediate in the pentose phosphate pathway, which allows L-arabinose to be used as a carbon source. AI can also convert D-galactose to D-tagatose at elevated temperatures in the presence of divalent metal ions. D-tagatose, rarely found in nature, is of commercial interest as a low-calorie sugar substitute.
Probab=23.23 E-value=5.9e+02 Score=23.40 Aligned_cols=60 Identities=5% Similarity=0.016 Sum_probs=32.9
Q ss_pred chhhHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHhcC--CCcccEEEEeccccc
Q 018375 93 KFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHKKD--PSFWNGAVLVAPMCK 153 (357)
Q Consensus 93 ~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~~~--p~~v~~~vl~~~~~~ 153 (357)
+.++..+....+.+.|...... .-+|+..|--.-.--+..+.... .+.++++|+.-+.+.
T Consensus 17 ~l~~~~~~~~~i~~~l~~~~~~-~~~v~~~~~v~~~~~i~~~~~~~~~~~~~dgvi~~m~TFs 78 (484)
T cd03557 17 ALKQVAAHSREIVDGLNASGKL-PVKIVFKPVLTTPDEILAVCREANADDNCAGVITWMHTFS 78 (484)
T ss_pred HHHHHHHHHHHHHHHhcccCCC-CeEEEEccccCCHHHHHHHHHHccccCCccEEEEccCCCc
Confidence 5566666666777766322111 24555555544444444444333 246888888766543
No 413
>PRK01254 hypothetical protein; Provisional
Probab=23.13 E-value=3.4e+02 Score=26.07 Aligned_cols=38 Identities=21% Similarity=0.094 Sum_probs=25.3
Q ss_pred eEEEEEccCC--ccccccHHHHHHHHhhCCcEEEEeCCCC
Q 018375 43 AVVFLCHGYG--MECSGFMRECGTRLASAGYAVFGIDYEG 80 (357)
Q Consensus 43 p~vv~lHG~~--~~~~~~~~~~~~~l~~~G~~vi~~d~~G 80 (357)
.=||++-|=. .+...-..-+...|..+||+|-.+.+|-
T Consensus 40 ~DiilVtGDAYVDHPsFG~AiigR~Le~~G~rVgIiaQPd 79 (707)
T PRK01254 40 CDIIIVTGDAYVDHPSFGMAIIGRMLEAQGFRVGIIAQPD 79 (707)
T ss_pred cCEEEEeCcccccCccchHHHHHHHHHHcCCeEEEEeCCC
Confidence 3488888732 2222223456678888899999998874
No 414
>PRK13529 malate dehydrogenase; Provisional
Probab=23.12 E-value=1.7e+02 Score=27.16 Aligned_cols=39 Identities=18% Similarity=0.256 Sum_probs=24.3
Q ss_pred EEEEccCCccccccHHHHHHHHhhCCc-------EEEEeCCCCCcc
Q 018375 45 VFLCHGYGMECSGFMRECGTRLASAGY-------AVFGIDYEGHGR 83 (357)
Q Consensus 45 vv~lHG~~~~~~~~~~~~~~~l~~~G~-------~vi~~d~~G~G~ 83 (357)
-|++.|.|...-..-+.+...+.+.|. +++.+|..|-=.
T Consensus 297 riv~~GAGsAgiGia~ll~~~~~~~Gl~~eeA~~~i~~vD~~GLl~ 342 (563)
T PRK13529 297 RIVFLGAGSAGCGIADQIVAAMVREGLSEEEARKRFFMVDRQGLLT 342 (563)
T ss_pred EEEEECCCHHHHHHHHHHHHHHHHcCCChhHhcCeEEEEcCCCeEe
Confidence 345556554433333556666666777 899999998533
No 415
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=23.09 E-value=1.6e+02 Score=24.83 Aligned_cols=36 Identities=19% Similarity=0.227 Sum_probs=25.2
Q ss_pred CceEEEEEccCCcccccc----HHHHHHHHhhCCcEEEEe
Q 018375 41 PKAVVFLCHGYGMECSGF----MRECGTRLASAGYAVFGI 76 (357)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~----~~~~~~~l~~~G~~vi~~ 76 (357)
+++.|++.||.......| |..+++.|.++|+.++.+
T Consensus 178 ~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~ 217 (319)
T TIGR02193 178 PAPYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLP 217 (319)
T ss_pred CCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEe
Confidence 467788888865554444 467888887778887754
No 416
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=23.05 E-value=3.9e+02 Score=23.19 Aligned_cols=65 Identities=15% Similarity=0.081 Sum_probs=39.2
Q ss_pred HHHHHHHhhCCcEEEEeCCCC------------CccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeChh
Q 018375 60 RECGTRLASAGYAVFGIDYEG------------HGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGESMG 127 (357)
Q Consensus 60 ~~~~~~l~~~G~~vi~~d~~G------------~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~G 127 (357)
..+.+.|+++|+.|.++-+-- -=.|.++.++ ..++.....++.+. ..++=++|.|+|
T Consensus 191 ~nIlr~L~~rg~~vtVVP~~t~~eeIl~~~pDGiflSNGPGDP-----~~~~~~i~~ik~l~------~~~iPifGICLG 259 (368)
T COG0505 191 RNILRELVKRGCRVTVVPADTSAEEILALNPDGIFLSNGPGDP-----APLDYAIETIKELL------GTKIPIFGICLG 259 (368)
T ss_pred HHHHHHHHHCCCeEEEEcCCCCHHHHHhhCCCEEEEeCCCCCh-----hHHHHHHHHHHHHh------ccCCCeEEEcHH
Confidence 567788999999988876542 2223333222 23444455555551 233478999999
Q ss_pred HHHHHHHH
Q 018375 128 GAVTLLLH 135 (357)
Q Consensus 128 g~~a~~~a 135 (357)
=.+...+.
T Consensus 260 HQllalA~ 267 (368)
T COG0505 260 HQLLALAL 267 (368)
T ss_pred HHHHHHhc
Confidence 88655443
No 417
>PLN03028 pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Provisional
Probab=23.00 E-value=3.9e+02 Score=25.36 Aligned_cols=93 Identities=16% Similarity=0.180 Sum_probs=45.9
Q ss_pred eEEEEEccCCccccccHHHHHHHHhhC--CcEEEEeCCCCCccCCCC---CccccchhhHHHHHHHHHHHHHhhhccCCc
Q 018375 43 AVVFLCHGYGMECSGFMRECGTRLASA--GYAVFGIDYEGHGRSRGA---RCYIKKFENIVNDCDDFFKSVCAQEEYTDK 117 (357)
Q Consensus 43 p~vv~lHG~~~~~~~~~~~~~~~l~~~--G~~vi~~d~~G~G~s~~~---~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~ 117 (357)
-.+|++-|-++... - ..+++++.+. +..|+.+ |..-+.+-. ......++..++-+.++++.+........+
T Consensus 175 d~LvvIGGddS~~~-A-~~Lae~~~~~~~~i~VIGI--PKTIDNDL~~~~td~s~GFdTA~k~~ae~I~ni~~dA~S~~~ 250 (610)
T PLN03028 175 DGLVIIGGVTSNTD-A-AQLAETFAEAKCKTKVVGV--PVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEK 250 (610)
T ss_pred CEEEEeCCchHHHH-H-HHHHHHHHHcCCCceEEEe--ceeeeCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 35777776554422 2 4677777766 4566644 222111111 111224566666666666666442221123
Q ss_pred cEE---EEEeChhHHHHHHHH-hcCCC
Q 018375 118 ARF---LYGESMGGAVTLLLH-KKDPS 140 (357)
Q Consensus 118 ~v~---lvG~S~Gg~~a~~~a-~~~p~ 140 (357)
.++ ++|-+.| ++|+..+ +..|+
T Consensus 251 ~~~~VevMGR~aG-~LAl~~aLat~pn 276 (610)
T PLN03028 251 YYYFIRLMGRKAS-HVALECALQSHPN 276 (610)
T ss_pred eEEEEEeCCcchH-HHHHHHHHhcCCC
Confidence 333 6677765 4555554 44443
No 418
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=22.94 E-value=1.9e+02 Score=20.20 Aligned_cols=31 Identities=23% Similarity=0.294 Sum_probs=19.6
Q ss_pred EEEccCCccccccHHHHHHHHhhCCcEEEEeC
Q 018375 46 FLCHGYGMECSGFMRECGTRLASAGYAVFGID 77 (357)
Q Consensus 46 v~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d 77 (357)
|++-|.|.+.... ..+...|...|..+..++
T Consensus 3 I~i~G~G~S~~~a-~~~~~~l~~~g~~~~~~~ 33 (128)
T cd05014 3 VVVTGVGKSGHIA-RKIAATLSSTGTPAFFLH 33 (128)
T ss_pred EEEEeCcHhHHHH-HHHHHHhhcCCCceEEcc
Confidence 5667777654333 556666666677777664
No 419
>COG4057 McrG Methyl coenzyme M reductase, gamma subunit [Coenzyme metabolism]
Probab=22.93 E-value=34 Score=26.11 Aligned_cols=12 Identities=33% Similarity=0.614 Sum_probs=9.1
Q ss_pred ccccCCCCccc-cc
Q 018375 343 LCGLKGRRMFH-HS 355 (357)
Q Consensus 343 ~~~~~~~~~~~-~~ 355 (357)
.||.+ |.|+| ||
T Consensus 150 ~~GiR-GatVHGHs 162 (257)
T COG4057 150 RSGIR-GATVHGHS 162 (257)
T ss_pred hcccc-cceeccce
Confidence 58899 66666 97
No 420
>PF05673 DUF815: Protein of unknown function (DUF815); InterPro: IPR008533 This domain consists of several bacterial proteins of unknown function.
Probab=22.91 E-value=4.3e+02 Score=21.65 Aligned_cols=14 Identities=29% Similarity=0.325 Sum_probs=7.5
Q ss_pred cEEEEeCCCCCccC
Q 018375 71 YAVFGIDYEGHGRS 84 (357)
Q Consensus 71 ~~vi~~d~~G~G~s 84 (357)
.+|+.+--||.|.|
T Consensus 53 nnvLL~G~rGtGKS 66 (249)
T PF05673_consen 53 NNVLLWGARGTGKS 66 (249)
T ss_pred cceEEecCCCCCHH
Confidence 34555555555554
No 421
>COG0607 PspE Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=22.79 E-value=1.7e+02 Score=19.60 Aligned_cols=34 Identities=15% Similarity=0.273 Sum_probs=21.4
Q ss_pred CCceEEEEEccCCccccccHHHHHHHHhhCCcEEEEeCCC
Q 018375 40 TPKAVVFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYE 79 (357)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~ 79 (357)
..++.||+|....-+ ...+..|...||..+ .++.
T Consensus 60 ~~~~ivv~C~~G~rS-----~~aa~~L~~~G~~~~-~~l~ 93 (110)
T COG0607 60 DDDPIVVYCASGVRS-----AAAAAALKLAGFTNV-YNLD 93 (110)
T ss_pred CCCeEEEEeCCCCCh-----HHHHHHHHHcCCccc-cccC
Confidence 346667767654433 355678888898877 4443
No 422
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=22.61 E-value=1.3e+02 Score=23.98 Aligned_cols=15 Identities=33% Similarity=0.572 Sum_probs=12.6
Q ss_pred HHHhhCCcEEEEeCC
Q 018375 64 TRLASAGYAVFGIDY 78 (357)
Q Consensus 64 ~~l~~~G~~vi~~d~ 78 (357)
..|+++|+.|+++|.
T Consensus 53 ~~LA~~G~~V~avD~ 67 (218)
T PRK13255 53 LWLAEQGHEVLGVEL 67 (218)
T ss_pred HHHHhCCCeEEEEcc
Confidence 456789999999996
No 423
>KOG3551 consensus Syntrophins (type beta) [Extracellular structures]
Probab=22.25 E-value=85 Score=27.13 Aligned_cols=40 Identities=18% Similarity=0.331 Sum_probs=30.4
Q ss_pred cceeeeeEEecCCcEEEEEEEcCC---------CCCceEEEEEccCCcc
Q 018375 15 VEYQEEYIRNARGVQLFTCRWLPF---------STPKAVVFLCHGYGME 54 (357)
Q Consensus 15 ~~~~~~~~~~~~g~~l~~~~~~p~---------~~~~p~vv~lHG~~~~ 54 (357)
..++.......||.++-|..|++. .-++|+|+++|-+.+.
T Consensus 449 ~pFEkLkmSsDDG~r~LyLDFGg~dGEiqLDLhscpKpiVFIlHsfLSA 497 (506)
T KOG3551|consen 449 HPFEKLKMSSDDGARMLYLDFGGPDGEIQLDLHSCPKPIVFILHSFLSA 497 (506)
T ss_pred ChHHHhccccCCCceEEEEecCCCCccEEeeeccCCCcEEEEehhhhhh
Confidence 456666777889999999999852 3478999999987653
No 424
>COG3640 CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning]
Probab=22.13 E-value=1.4e+02 Score=24.09 Aligned_cols=34 Identities=26% Similarity=0.241 Sum_probs=22.2
Q ss_pred EEEEccCCccccccHHHH-HHHHhhC-CcEEEEeCC
Q 018375 45 VFLCHGYGMECSGFMREC-GTRLASA-GYAVFGIDY 78 (357)
Q Consensus 45 vv~lHG~~~~~~~~~~~~-~~~l~~~-G~~vi~~d~ 78 (357)
.|.+-|-|++.......+ +..|.++ ||.|+++|-
T Consensus 2 kIaI~GKGG~GKTtiaalll~~l~~~~~~~VLvVDa 37 (255)
T COG3640 2 KIAITGKGGVGKTTIAALLLKRLLSKGGYNVLVVDA 37 (255)
T ss_pred eEEEecCCCccHHHHHHHHHHHHHhcCCceEEEEeC
Confidence 456677666655443444 5566555 599999995
No 425
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=22.09 E-value=2.4e+02 Score=19.66 Aligned_cols=33 Identities=24% Similarity=0.336 Sum_probs=22.2
Q ss_pred EccCCccccccHHHHHHHHhhCCcEEEEeCCCC
Q 018375 48 CHGYGMECSGFMRECGTRLASAGYAVFGIDYEG 80 (357)
Q Consensus 48 lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G 80 (357)
+=|...+...|-..+...|.+.||.|+.++.++
T Consensus 5 VvGaS~~~~~~g~~v~~~l~~~G~~v~~Vnp~~ 37 (116)
T PF13380_consen 5 VVGASDNPGKFGYRVLRNLKAAGYEVYPVNPKG 37 (116)
T ss_dssp EET--SSTTSHHHHHHHHHHHTT-EEEEESTTC
T ss_pred EEcccCCCCChHHHHHHHHHhCCCEEEEECCCc
Confidence 335444445555677888888999999999886
No 426
>cd01518 RHOD_YceA Member of the Rhodanese Homology Domain superfamily. This CD includes Escherichia coli YceA, Bacillus subtilis YbfQ, and similar uncharacterized proteins.
Probab=21.75 E-value=1.5e+02 Score=19.71 Aligned_cols=33 Identities=21% Similarity=0.398 Sum_probs=17.4
Q ss_pred CCceEEEEEccCCccccccHHHHHHHHhhCCcE-EEEeC
Q 018375 40 TPKAVVFLCHGYGMECSGFMRECGTRLASAGYA-VFGID 77 (357)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~G~~-vi~~d 77 (357)
+.+++||++.+..-+ ...+..|...||. |+.++
T Consensus 60 ~~~~ivvyC~~G~rs-----~~a~~~L~~~G~~~v~~l~ 93 (101)
T cd01518 60 KGKKVLMYCTGGIRC-----EKASAYLKERGFKNVYQLK 93 (101)
T ss_pred CCCEEEEECCCchhH-----HHHHHHHHHhCCcceeeec
Confidence 445666666542211 2334567777884 65543
No 427
>PRK13230 nitrogenase reductase-like protein; Reviewed
Probab=21.51 E-value=1.3e+02 Score=24.87 Aligned_cols=41 Identities=15% Similarity=0.139 Sum_probs=28.7
Q ss_pred EEEEEccCCcccc-ccHHHHHHHHhhCCcEEEEeCCCCCccCC
Q 018375 44 VVFLCHGYGMECS-GFMRECGTRLASAGYAVFGIDYEGHGRSR 85 (357)
Q Consensus 44 ~vv~lHG~~~~~~-~~~~~~~~~l~~~G~~vi~~d~~G~G~s~ 85 (357)
+|.++ |=||... ..-..++..|++.|++|+.+|+=-.|...
T Consensus 3 ~i~~~-gKGGVGKTT~a~nLA~~La~~G~rVLliD~Dpq~n~t 44 (279)
T PRK13230 3 KFCFY-GKGGIGKSTTVCNIAAALAESGKKVLVVGCDPKADCT 44 (279)
T ss_pred EEEEE-CCCCCcHHHHHHHHHHHHHhCCCEEEEEeeCCccccc
Confidence 35555 6555433 33467899999999999999987665543
No 428
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=21.35 E-value=77 Score=22.58 Aligned_cols=34 Identities=15% Similarity=-0.015 Sum_probs=22.8
Q ss_pred EEEEccCCccccccHHHHHHHHhhCCcEEEEeCCC
Q 018375 45 VFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYE 79 (357)
Q Consensus 45 vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~ 79 (357)
+|...|..++-.-+ -.+++.|.++|+.|...-.+
T Consensus 2 li~~~Gt~Ghv~P~-lala~~L~~rGh~V~~~~~~ 35 (139)
T PF03033_consen 2 LIATGGTRGHVYPF-LALARALRRRGHEVRLATPP 35 (139)
T ss_dssp EEEEESSHHHHHHH-HHHHHHHHHTT-EEEEEETG
T ss_pred EEEEcCChhHHHHH-HHHHHHHhccCCeEEEeecc
Confidence 45566666665555 57889999999998755444
No 429
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=21.33 E-value=66 Score=27.19 Aligned_cols=17 Identities=29% Similarity=0.696 Sum_probs=15.0
Q ss_pred EEEEeChhHHHHHHHHh
Q 018375 120 FLYGESMGGAVTLLLHK 136 (357)
Q Consensus 120 ~lvG~S~Gg~~a~~~a~ 136 (357)
.+.|.|.||.+|+.++.
T Consensus 45 li~GTStGgiiA~~l~~ 61 (309)
T cd07216 45 LIGGTSTGGLIAIMLGR 61 (309)
T ss_pred eeeeccHHHHHHHHhcc
Confidence 58899999999998863
No 430
>cd03413 CbiK_C Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), C-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases, and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=21.28 E-value=2.8e+02 Score=18.88 Aligned_cols=28 Identities=25% Similarity=0.291 Sum_probs=18.6
Q ss_pred eEEEEEccCCccccccHHHHHHHHhhCC
Q 018375 43 AVVFLCHGYGMECSGFMRECGTRLASAG 70 (357)
Q Consensus 43 p~vv~lHG~~~~~~~~~~~~~~~l~~~G 70 (357)
.+|++-||........+..+...+.+.+
T Consensus 2 ~illvgHGSr~~~~~~~~~l~~~l~~~~ 29 (103)
T cd03413 2 AVVFMGHGTDHPSNAVYAALEYVLREED 29 (103)
T ss_pred eEEEEECCCCchhhhHHHHHHHHHHhcC
Confidence 3577779987654444577777776553
No 431
>PF04244 DPRP: Deoxyribodipyrimidine photo-lyase-related protein; InterPro: IPR007357 This family appears to be related to DNA photolyases.; PDB: 3ZXS_A.
Probab=21.26 E-value=3.3e+02 Score=21.83 Aligned_cols=21 Identities=29% Similarity=0.531 Sum_probs=15.2
Q ss_pred HHHHHHHHhhCCcEEEEeCCC
Q 018375 59 MRECGTRLASAGYAVFGIDYE 79 (357)
Q Consensus 59 ~~~~~~~l~~~G~~vi~~d~~ 79 (357)
++.+++.|.++|+.|..+.+.
T Consensus 51 MRhfa~~L~~~G~~V~Y~~~~ 71 (224)
T PF04244_consen 51 MRHFADELRAKGFRVHYIELD 71 (224)
T ss_dssp HHHHHHHHHHTT--EEEE-TT
T ss_pred HHHHHHHHHhCCCEEEEEeCC
Confidence 467889999999999999875
No 432
>PRK07933 thymidylate kinase; Validated
Probab=21.25 E-value=1.8e+02 Score=22.93 Aligned_cols=40 Identities=18% Similarity=0.218 Sum_probs=28.2
Q ss_pred EEEEccCCcc-ccccHHHHHHHHhhCCcEEEEeCCCCCccC
Q 018375 45 VFLCHGYGME-CSGFMRECGTRLASAGYAVFGIDYEGHGRS 84 (357)
Q Consensus 45 vv~lHG~~~~-~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s 84 (357)
+|.+=|.-++ ...-...+.+.|...|+.|+....|.+|.+
T Consensus 2 ~IviEG~dGsGKST~~~~L~~~L~~~g~~v~~~~~P~~~~~ 42 (213)
T PRK07933 2 LIAIEGVDGAGKRTLTEALRAALEARGRSVATLAFPRYGRS 42 (213)
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 3555565333 334447888999999999999999977643
No 433
>PRK06523 short chain dehydrogenase; Provisional
Probab=21.23 E-value=3.5e+02 Score=21.75 Aligned_cols=32 Identities=22% Similarity=-0.008 Sum_probs=22.9
Q ss_pred EEEEccCCccccccHHHHHHHHhhCCcEEEEeCCC
Q 018375 45 VFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYE 79 (357)
Q Consensus 45 vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~ 79 (357)
.+++.|..+. .- ..++..|+++|++|++.+..
T Consensus 11 ~vlItGas~g--IG-~~ia~~l~~~G~~v~~~~r~ 42 (260)
T PRK06523 11 RALVTGGTKG--IG-AATVARLLEAGARVVTTARS 42 (260)
T ss_pred EEEEECCCCc--hh-HHHHHHHHHCCCEEEEEeCC
Confidence 4566665443 22 57888999999999998764
No 434
>cd01971 Nitrogenase_VnfN_like Nitrogenase_vnfN_like: VnfN subunit of the VnfEN complex-like. This group in addition to VnfN contains a subset of the beta subunit of the nitrogenase MoFe protein and NifN-like proteins. The nitrogenase enzyme system catalyzes the ATP-dependent reduction of dinitrogen to ammonia. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of MoFe protein of the molybdenum(Mo)-nitrogenase. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to NifEN where it is further processed to FeMoco. VnfEN may similarly be a scaffolding protien for the iron-vanadium cofactor (FeVco) of the vanadium-dependent (V)-nitrogenase. NifE and NifN are essential for the Mo-nitrogenase, VnfE and VnfN are not essential for the V-nitrogenase. NifE and NifN can substitute when the vnfEN genes are inactivated.
Probab=21.11 E-value=4.6e+02 Score=23.49 Aligned_cols=59 Identities=10% Similarity=0.063 Sum_probs=35.4
Q ss_pred HHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhh-ccCCccEEEEEeC
Q 018375 59 MRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQE-EYTDKARFLYGES 125 (357)
Q Consensus 59 ~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~-~~~~~~v~lvG~S 125 (357)
...++..+.+.|..|+.++-+|+..+.. ..+..-+.++++++.... ......|.|+|..
T Consensus 105 i~~v~~~~~~~~~~vi~v~t~gf~g~~~--------~G~~~a~~al~~~~~~~~~~~~~~~VNiiG~~ 164 (427)
T cd01971 105 VGAVVSEFQEGGAPIVYLETGGFKGNNY--------AGHEIVLKAIIDQYVGQSEEKEPGLVNLWGPV 164 (427)
T ss_pred HHHHHHHhhhcCCCEEEEECCCcCcccc--------cHHHHHHHHHHHHhccCCCCCCCCeEEEEecc
Confidence 3667777755688999999999865431 222233445555543221 1234568899864
No 435
>COG0400 Predicted esterase [General function prediction only]
Probab=21.09 E-value=3.9e+02 Score=21.08 Aligned_cols=42 Identities=21% Similarity=0.184 Sum_probs=29.9
Q ss_pred CCceEEEEEccCCccc--cccHHHHHHHHhhCCcEEEEeCCC-CC
Q 018375 40 TPKAVVFLCHGYGMEC--SGFMRECGTRLASAGYAVFGIDYE-GH 81 (357)
Q Consensus 40 ~~~p~vv~lHG~~~~~--~~~~~~~~~~l~~~G~~vi~~d~~-G~ 81 (357)
.+..+|+++||.-... ......+.+.|.+.|..|-.-++. ||
T Consensus 144 ~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~~GH 188 (207)
T COG0400 144 LAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHEGGH 188 (207)
T ss_pred cCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEecCCC
Confidence 4566799999976542 122356778888899999888886 44
No 436
>PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport. Some of them function as molecular chaperones, subunits of proteolytic complexes or independent proteases (FtsH, Lon). They also act as DNA helicases and transcription factors []. AAA ATPases belong to the AAA+ superfamily of ringshaped P-loop NTPases, which act via the energy-dependent unfolding of macromolecules [, ]. There are six major clades of AAA domains (proteasome subunits, metalloproteases, domains D1 and D2 of ATPases with two AAA domains, the MSP1/katanin/spastin group and BCS1 and it homologues), as well as a number of deeply branching minor clades []. They assemble into oligomeric assemblies (often hexamers) that form a ring-shaped structure with a central pore. These proteins produce a molecular motor that couples ATP binding and hydrolysis to changes in conformational states that act upon a target substrate, either translocating or remodelling it []. They are found in all living organisms and share the common feature of the presence of a highly conserved AAA domain called the AAA module. This domain is responsible for ATP binding and hydrolysis. It contains 200-250 residues, among them there are two classical motifs, Walker A (GX4GKT) and Walker B (HyDE) []. The functional variety seen between AAA ATPases is in part due to their extensive number of accessory domains and factors, and to their variable organisation within oligomeric assemblies, in addition to changes in key functional residues within the ATPase domain itself. More information about these proteins can be found at Protein of the Month: AAA ATPases [].; GO: 0005524 ATP binding; PDB: 3H4M_A 1NSF_A 1D2N_A 1HQY_E 1DO0_E 1DO2_C 1G4B_E 1HT1_F 1G4A_F 1HT2_G ....
Probab=21.00 E-value=2.9e+02 Score=19.06 Aligned_cols=52 Identities=25% Similarity=0.226 Sum_probs=29.6
Q ss_pred EEEccCCcccccc-HHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHH
Q 018375 46 FLCHGYGMECSGF-MRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSV 108 (357)
Q Consensus 46 v~lHG~~~~~~~~-~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l 108 (357)
|++||-.+..... ...+++.+ |+.++.+|..-...+ ...+..+.+..+++..
T Consensus 1 ill~G~~G~GKT~l~~~la~~l---~~~~~~i~~~~~~~~--------~~~~~~~~i~~~~~~~ 53 (132)
T PF00004_consen 1 ILLHGPPGTGKTTLARALAQYL---GFPFIEIDGSELISS--------YAGDSEQKIRDFFKKA 53 (132)
T ss_dssp EEEESSTTSSHHHHHHHHHHHT---TSEEEEEETTHHHTS--------STTHHHHHHHHHHHHH
T ss_pred CEEECcCCCCeeHHHHHHHhhc---ccccccccccccccc--------cccccccccccccccc
Confidence 6889987765533 23333333 688888887655422 2333445555666555
No 437
>PLN03050 pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional
Probab=20.99 E-value=1.7e+02 Score=23.87 Aligned_cols=33 Identities=27% Similarity=0.182 Sum_probs=24.5
Q ss_pred EEEEEccCCccccccHHHHHHHHhhCCcEEEEeC
Q 018375 44 VVFLCHGYGMECSGFMRECGTRLASAGYAVFGID 77 (357)
Q Consensus 44 ~vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d 77 (357)
.|+++-|-|.+...- --++++|..+||.|.++-
T Consensus 62 ~V~VlcG~GNNGGDG-lv~AR~L~~~G~~V~v~~ 94 (246)
T PLN03050 62 RVLLVCGPGNNGGDG-LVAARHLAHFGYEVTVCY 94 (246)
T ss_pred eEEEEECCCCCchhH-HHHHHHHHHCCCeEEEEE
Confidence 477777877766554 367889988999987765
No 438
>PF00691 OmpA: OmpA family; InterPro: IPR006665 This entry represents domain with a beta/alpha/beta/alpha-beta(2) structure found in the C-terminal region of many Gram-negative bacterial outer membrane proteins [], such as porin-like integral membrane proteins (such as ompA) [], small lipid-anchored proteins (such as pal) [], and MotB proton channels []. The N-terminal half is variable although some of the proteins in this group have the OmpA-like transmembrane domain IPR000498 from INTERPRO at the N terminus. OmpA from Escherichia coli is required for pathogenesis, and can interact with host receptor molecules []. MotB (and MotA) serves two functions in E. coli, the MotA(4)-MotB(2) complex attaches to the cell wall via MotB to form the stator of the flagellar motor, and the MotA-MotB complex couples the flow of ions across the cell membrane to movement of the rotor [].; GO: 0009279 cell outer membrane; PDB: 1OAP_A 2W8B_G 2HQS_C 4ERH_A 2ZF8_A 2ZOV_A 2ZVZ_B 2ZVY_A 3TD4_B 3TD5_D ....
Probab=20.95 E-value=1.3e+02 Score=19.80 Aligned_cols=62 Identities=19% Similarity=0.181 Sum_probs=31.4
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHhhhccCCccEEEEEeC
Q 018375 60 RECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCAQEEYTDKARFLYGES 125 (357)
Q Consensus 60 ~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S 125 (357)
..++..|...+... .+...||-.+.+.... ...--.+=...+.++|.. .+++..++.+.|+.
T Consensus 18 ~~l~~~l~~~~~~~-~i~I~G~td~~g~~~~--n~~LS~~RA~~V~~~L~~-~gi~~~ri~~~~~G 79 (97)
T PF00691_consen 18 DELAKILKYPGNKD-QIEIEGHTDSTGSAEY--NQELSQRRAEAVKQYLVE-NGIPPERISVVGYG 79 (97)
T ss_dssp HHHHHHHHSTTSTT-EEEEEEEEESSSSHHH--HHHHHHHHHHHHHHHHHH-TTSSGGGEEEEEET
T ss_pred HHHHHHHhCcCCCC-eEEEEEEEcCcchhhH--HhHHHHHHHHHHHHHHHH-cCCChHhEEEEEEc
Confidence 45666666333443 4444566554433222 222222334445555554 55667788777764
No 439
>COG1763 MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]
Probab=20.95 E-value=1.9e+02 Score=21.74 Aligned_cols=39 Identities=18% Similarity=0.287 Sum_probs=30.9
Q ss_pred EEEEEccCCccc-cccHHHHHHHHhhCCcEEEEeCCCCCc
Q 018375 44 VVFLCHGYGMEC-SGFMRECGTRLASAGYAVFGIDYEGHG 82 (357)
Q Consensus 44 ~vv~lHG~~~~~-~~~~~~~~~~l~~~G~~vi~~d~~G~G 82 (357)
.|+=+-|+.++. ....+.+++.|..+||+|.++-..+|+
T Consensus 3 ~Il~ivG~k~SGKTTLie~lv~~L~~~G~rVa~iKH~hh~ 42 (161)
T COG1763 3 KILGIVGYKNSGKTTLIEKLVRKLKARGYRVATVKHAHHD 42 (161)
T ss_pred cEEEEEecCCCChhhHHHHHHHHHHhCCcEEEEEEecCCC
Confidence 466677765543 345689999999999999999999987
No 440
>PRK03094 hypothetical protein; Provisional
Probab=20.89 E-value=1.2e+02 Score=19.61 Aligned_cols=19 Identities=21% Similarity=0.384 Sum_probs=16.2
Q ss_pred HHHHHHHhhCCcEEEEeCC
Q 018375 60 RECGTRLASAGYAVFGIDY 78 (357)
Q Consensus 60 ~~~~~~l~~~G~~vi~~d~ 78 (357)
..+.++|.++||.|+-++.
T Consensus 11 s~i~~~L~~~GYeVv~l~~ 29 (80)
T PRK03094 11 TDVQQALKQKGYEVVQLRS 29 (80)
T ss_pred HHHHHHHHHCCCEEEecCc
Confidence 6788999999999987753
No 441
>PRK00889 adenylylsulfate kinase; Provisional
Probab=20.84 E-value=2e+02 Score=21.61 Aligned_cols=36 Identities=25% Similarity=0.277 Sum_probs=24.5
Q ss_pred eEEEEEccCCcccc-ccHHHHHHHHhhCCcEEEEeCC
Q 018375 43 AVVFLCHGYGMECS-GFMRECGTRLASAGYAVFGIDY 78 (357)
Q Consensus 43 p~vv~lHG~~~~~~-~~~~~~~~~l~~~G~~vi~~d~ 78 (357)
+.+|.+.|.+++.. ..-..++..|...|..++.+|.
T Consensus 4 g~~i~~~G~~GsGKST~a~~la~~l~~~g~~v~~id~ 40 (175)
T PRK00889 4 GVTVWFTGLSGAGKTTIARALAEKLREAGYPVEVLDG 40 (175)
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEcC
Confidence 44888889877644 3335667777777777877764
No 442
>PF11080 DUF2622: Protein of unknown function (DUF2622); InterPro: IPR022597 This family is conserved in the Enterobacteriaceae family. The function is not known.
Probab=20.80 E-value=2.8e+02 Score=18.72 Aligned_cols=64 Identities=13% Similarity=0.137 Sum_probs=38.7
Q ss_pred EEEEccCCccccccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHH
Q 018375 45 VFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVC 109 (357)
Q Consensus 45 vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~ 109 (357)
||-++-...+...+ ..+-..|...||....-|--|.-.--+...+...-..-.+++.++++.+.
T Consensus 10 VVt~~~~e~~l~d~-~~L~~~lt~~GF~~tl~D~~G~~HeLgtntfgl~S~l~~~eV~~la~~la 73 (96)
T PF11080_consen 10 VVTFEYQEAGLTDI-NELNNHLTRAGFSTTLTDEDGNPHELGTNTFGLISALSAEEVAQLARGLA 73 (96)
T ss_pred EEEEEeccCChHHH-HHHHHHHHhcCceeEEecCCCCEeecCCCeEEEEecCCHHHHHHHHHHHh
Confidence 44454444444555 78899999999999999988864433333221122223456666666664
No 443
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=20.79 E-value=1.4e+02 Score=22.79 Aligned_cols=34 Identities=24% Similarity=0.225 Sum_probs=22.2
Q ss_pred EEEccCCcccc-ccHHHHHHHHhhCCcEEEEeCCC
Q 018375 46 FLCHGYGMECS-GFMRECGTRLASAGYAVFGIDYE 79 (357)
Q Consensus 46 v~lHG~~~~~~-~~~~~~~~~l~~~G~~vi~~d~~ 79 (357)
.+..+-||... ..-..++..|+++|+.|+.+|.=
T Consensus 2 ~v~~~kGG~GKTt~a~~la~~la~~g~~VlliD~D 36 (195)
T PF01656_consen 2 AVTSGKGGVGKTTIAANLAQALARKGKKVLLIDLD 36 (195)
T ss_dssp EEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEES
T ss_pred EEEcCCCCccHHHHHHHHHhccccccccccccccC
Confidence 34444444333 33357889999999999999973
No 444
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=20.54 E-value=3.2e+02 Score=21.51 Aligned_cols=58 Identities=26% Similarity=0.348 Sum_probs=38.1
Q ss_pred ceEEEEEccCCcccc--ccHHHHHHHHhhCCcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHH
Q 018375 42 KAVVFLCHGYGMECS--GFMRECGTRLASAGYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKS 107 (357)
Q Consensus 42 ~p~vv~lHG~~~~~~--~~~~~~~~~l~~~G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~ 107 (357)
.++|+.+||-...-- .|-....+.|...|.++.---|+|.+.| +..+..+|+..++..
T Consensus 144 ~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~--------~~~~e~~~~~~~~~~ 203 (206)
T KOG2112|consen 144 YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHS--------TSPQELDDLKSWIKT 203 (206)
T ss_pred cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCcccc--------ccHHHHHHHHHHHHH
Confidence 567999999655422 2334556777778888666677887766 344445666666654
No 445
>cd01520 RHOD_YbbB Member of the Rhodanese Homology Domain superfamily. This CD includes several putative ATP /GTP binding proteins including E. coli YbbB.
Probab=20.49 E-value=2.1e+02 Score=20.22 Aligned_cols=33 Identities=18% Similarity=0.177 Sum_probs=18.7
Q ss_pred CCceEEEEEc-cCCccccccHHHHHHHHhhCCcEEEEeC
Q 018375 40 TPKAVVFLCH-GYGMECSGFMRECGTRLASAGYAVFGID 77 (357)
Q Consensus 40 ~~~p~vv~lH-G~~~~~~~~~~~~~~~l~~~G~~vi~~d 77 (357)
+..++||++. |...+ ...+..|...||.|+.+|
T Consensus 85 ~~~~vvvyC~~~G~rs-----~~a~~~L~~~G~~v~~L~ 118 (128)
T cd01520 85 RDPKLLIYCARGGMRS-----QSLAWLLESLGIDVPLLE 118 (128)
T ss_pred CCCeEEEEeCCCCccH-----HHHHHHHHHcCCceeEeC
Confidence 4567788885 32222 223345556699876665
No 446
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=20.44 E-value=78 Score=25.85 Aligned_cols=18 Identities=33% Similarity=0.490 Sum_probs=16.2
Q ss_pred EEEEeChhHHHHHHHHhc
Q 018375 120 FLYGESMGGAVTLLLHKK 137 (357)
Q Consensus 120 ~lvG~S~Gg~~a~~~a~~ 137 (357)
.++|.|.||.+|+.++..
T Consensus 37 ~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 37 LIAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeeccHHHHHHHHHhcC
Confidence 489999999999999875
No 447
>cd03131 GATase1_HTS Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). HTS, the first enzyme in methionine biosynthesis in Escherichia coli, transfers a succinyl group from succinyl-CoA to homoserine forming succinyl homoserine. It has been suggested that the succinyl group of succinyl-CoA is initially transferred to an enzyme nucleophile before subsequent transfer to homoserine. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with GATase1 domains a reactive cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. It has been proposed that this cys is in the active site of the molecule. However, as succinyl has been found bound to a conserved lysine residue, this conserved cys may play a role in dimer formation. HTS acti
Probab=20.40 E-value=40 Score=25.69 Aligned_cols=35 Identities=3% Similarity=-0.044 Sum_probs=26.8
Q ss_pred hHHHHHHHHHHHHHhhhccCCccEEEEEeChhHHHHHHHHh
Q 018375 96 NIVNDCDDFFKSVCAQEEYTDKARFLYGESMGGAVTLLLHK 136 (357)
Q Consensus 96 ~~~~d~~~~l~~l~~~~~~~~~~v~lvG~S~Gg~~a~~~a~ 136 (357)
++-+.+..++++.++ .-.-.+|-|||+..|+.++.
T Consensus 82 ~Yw~El~~i~dwa~~------~v~stl~iCWgaqaal~~~y 116 (175)
T cd03131 82 DYWEELTEILDWAKT------HVTSTLFSCWAAMAALYYFY 116 (175)
T ss_pred chHHHHHHHHHHHHH------hCcchHHHHHHHHHHHHHHc
Confidence 455678888888843 23568899999999999874
No 448
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=20.38 E-value=1.6e+02 Score=23.88 Aligned_cols=32 Identities=25% Similarity=0.138 Sum_probs=25.8
Q ss_pred EEEEccCCccccccHHHHHHHHhhCCcEEEEeCCC
Q 018375 45 VFLCHGYGMECSGFMRECGTRLASAGYAVFGIDYE 79 (357)
Q Consensus 45 vv~lHG~~~~~~~~~~~~~~~l~~~G~~vi~~d~~ 79 (357)
|+++-|.++. +-...++.|++.|+.|+....|
T Consensus 8 v~lITGASSG---iG~A~A~~l~~~G~~vvl~aRR 39 (246)
T COG4221 8 VALITGASSG---IGEATARALAEAGAKVVLAARR 39 (246)
T ss_pred EEEEecCcch---HHHHHHHHHHHCCCeEEEEecc
Confidence 7888886544 2278899999999999999866
No 449
>PF00148 Oxidored_nitro: Nitrogenase component 1 type Oxidoreductase; InterPro: IPR000510 Enzymes belonging to this family include cofactor-requiring nitrogenases and protochlorophyllide reductase. The key enzymatic reactions in nitrogen fixation are catalysed by the nitrogenase complex, which has two components, the iron protein (component 2), and a component (component 1) which is either a molybdenum-iron, vanadium-iron or iron-iron protein. The enzyme (1.18.6.1 from EC) forms a hexamer of two alpha, two beta and two delta chains. Protochlorophyllide reductase (1.3.1.33 from EC) is involved in the light-dependent accumulation of chlorophyll, probably at the step of reduction of protochlorophyllide to chlorophyllide.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1QH1_C 1QH8_A 1H1L_C 1QGU_A 3AEK_C 3AET_C 3AER_C 3AEU_A 3AES_C 3AEQ_C ....
Probab=20.28 E-value=4.2e+02 Score=23.35 Aligned_cols=60 Identities=17% Similarity=0.220 Sum_probs=37.3
Q ss_pred HHHHHHHhhC-CcEEEEeCCCCCccCCCCCccccchhhHHHHHHHHHHHHHh-hhccCCccEEEEEeC-hh
Q 018375 60 RECGTRLASA-GYAVFGIDYEGHGRSRGARCYIKKFENIVNDCDDFFKSVCA-QEEYTDKARFLYGES-MG 127 (357)
Q Consensus 60 ~~~~~~l~~~-G~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~-~~~~~~~~v~lvG~S-~G 127 (357)
..+++.+.+. |..|+.++.+|+..+ ...-+..-+.++++.+.. ........|.|+|.+ ++
T Consensus 94 ~~v~~~~~~~~~~~vi~v~~~gf~~~--------~~~G~~~a~~~l~~~~~~~~~~~~~~~VNiiG~~~~~ 156 (398)
T PF00148_consen 94 EAVARELQEEYGIPVIPVHTPGFSGS--------YSQGYDAALRALAEQLVKPPEEKKPRSVNIIGGSPLG 156 (398)
T ss_dssp HHHHHHHHHHHSSEEEEEE--TTSSS--------HHHHHHHHHHHHHHHHTTGTTTTSSSEEEEEEESTBT
T ss_pred HHHHHHhhcccCCcEEEEECCCccCC--------ccchHHHHHHHHHhhcccccccCCCCceEEecCcCCC
Confidence 7778888755 679999999999332 223334455566666633 223345689999998 55
No 450
>PF03698 UPF0180: Uncharacterised protein family (UPF0180); InterPro: IPR005370 The members of this family are small uncharacterised proteins.
Probab=20.23 E-value=1.2e+02 Score=19.66 Aligned_cols=19 Identities=21% Similarity=0.426 Sum_probs=16.5
Q ss_pred HHHHHHHhhCCcEEEEeCC
Q 018375 60 RECGTRLASAGYAVFGIDY 78 (357)
Q Consensus 60 ~~~~~~l~~~G~~vi~~d~ 78 (357)
..+.++|.++||.|+-++-
T Consensus 11 s~v~~~L~~~GyeVv~l~~ 29 (80)
T PF03698_consen 11 SNVKEALREKGYEVVDLEN 29 (80)
T ss_pred hHHHHHHHHCCCEEEecCC
Confidence 6788999999999998873
No 451
>PRK11168 glpC sn-glycerol-3-phosphate dehydrogenase subunit C; Provisional
Probab=20.21 E-value=5.2e+02 Score=22.76 Aligned_cols=43 Identities=21% Similarity=0.205 Sum_probs=26.2
Q ss_pred ceEEEEEccCCcccc--ccHHHHHHHHhhCCcEEEEeCCCCCccC
Q 018375 42 KAVVFLCHGYGMECS--GFMRECGTRLASAGYAVFGIDYEGHGRS 84 (357)
Q Consensus 42 ~p~vv~lHG~~~~~~--~~~~~~~~~l~~~G~~vi~~d~~G~G~s 84 (357)
+..|+|++|-..+.. .........|...|+.|+..+..-.|..
T Consensus 161 ~~~v~~f~gC~~~~~~p~~~~a~~~lL~~~G~~v~~~~~~CCG~p 205 (396)
T PRK11168 161 KKQVAYFHGCYVNYNHPQLGKDLVKVLNAMGYEVLLPKEKCCGLP 205 (396)
T ss_pred CCeEEEECccccccCCcHHHHHHHHHHHHCCCEEEcCCCCccChh
Confidence 346899998654321 1224566678888999965554444543
No 452
>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants. Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates.
Probab=20.16 E-value=74 Score=27.49 Aligned_cols=19 Identities=32% Similarity=0.578 Sum_probs=16.5
Q ss_pred EEEEeChhHHHHHHHHhcC
Q 018375 120 FLYGESMGGAVTLLLHKKD 138 (357)
Q Consensus 120 ~lvG~S~Gg~~a~~~a~~~ 138 (357)
.+.|.|.||.+|+.++...
T Consensus 46 liaGTStGgiiA~~la~~~ 64 (349)
T cd07214 46 VIAGTSTGGLITAMLTAPN 64 (349)
T ss_pred EEeeCCHHHHHHHHHhcCC
Confidence 5889999999999998743
No 453
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=20.04 E-value=1.4e+02 Score=23.56 Aligned_cols=15 Identities=33% Similarity=0.601 Sum_probs=12.8
Q ss_pred HHHhhCCcEEEEeCC
Q 018375 64 TRLASAGYAVFGIDY 78 (357)
Q Consensus 64 ~~l~~~G~~vi~~d~ 78 (357)
..|+++|+.|+++|.
T Consensus 50 ~~LA~~G~~V~gvD~ 64 (213)
T TIGR03840 50 AWLAEQGHRVLGVEL 64 (213)
T ss_pred HHHHhCCCeEEEEeC
Confidence 457789999999996
Done!