Query 018376
Match_columns 357
No_of_seqs 267 out of 1999
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 14:17:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018376.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018376hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3o0f_A Putative metal-dependen 100.0 2.6E-58 9E-63 442.9 28.3 256 70-340 10-273 (301)
2 2yb1_A Amidohydrolase; HET: AM 100.0 4.9E-49 1.7E-53 377.2 28.6 257 72-341 1-262 (292)
3 3e38_A Two-domain protein cont 99.9 1.5E-27 5.3E-32 233.0 15.0 164 69-331 15-198 (343)
4 2yxo_A Histidinol phosphatase; 99.9 3.5E-23 1.2E-27 193.1 11.7 180 74-330 1-227 (267)
5 1m65_A Hypothetical protein YC 99.9 9.8E-23 3.4E-27 188.0 14.3 174 72-329 1-194 (245)
6 2anu_A Hypothetical protein TM 99.9 1.2E-22 4.1E-27 190.0 12.7 159 67-329 14-207 (255)
7 2hnh_A DNA polymerase III alph 99.7 9E-18 3.1E-22 181.6 15.6 84 73-159 5-90 (910)
8 2w9m_A Polymerase X; SAXS, DNA 99.7 1.3E-17 4.3E-22 173.3 13.8 173 69-329 323-518 (578)
9 2wje_A CPS4B, tyrosine-protein 99.7 2E-17 7E-22 153.7 11.1 172 73-330 4-206 (247)
10 3qy7_A Tyrosine-protein phosph 99.7 2.1E-17 7.1E-22 155.8 10.6 172 74-330 1-197 (262)
11 2hpi_A DNA polymerase III alph 99.7 5.4E-16 1.8E-20 170.9 17.1 99 72-172 5-113 (1220)
12 3b0x_A DNA polymerase beta fam 99.7 5.3E-16 1.8E-20 161.0 15.6 172 72-329 336-531 (575)
13 3f2b_A DNA-directed DNA polyme 99.5 9.7E-15 3.3E-19 158.7 10.9 104 71-176 113-228 (1041)
14 3dcp_A Histidinol-phosphatase; 99.4 6.4E-13 2.2E-17 126.3 13.8 67 73-139 1-97 (283)
15 1v77_A PH1877P, hypothetical p 98.9 7.8E-09 2.7E-13 94.0 10.9 70 253-329 86-170 (212)
16 2y1h_A Putative deoxyribonucle 93.1 0.15 5.1E-06 46.5 6.4 61 72-133 4-64 (272)
17 1zzm_A Putative deoxyribonucle 89.6 0.73 2.5E-05 41.4 7.1 55 72-127 3-57 (259)
18 3rcm_A TATD family hydrolase; 88.3 0.48 1.7E-05 44.3 5.0 54 72-126 1-54 (287)
19 3ipw_A Hydrolase TATD family p 86.6 0.47 1.6E-05 45.4 3.9 63 63-126 17-89 (325)
20 1xwy_A DNAse TATD, deoxyribonu 86.6 0.81 2.8E-05 41.2 5.3 54 73-127 4-57 (264)
21 3gg7_A Uncharacterized metallo 85.6 0.35 1.2E-05 44.6 2.4 49 73-126 2-50 (254)
22 1yix_A Deoxyribonuclease YCFH; 85.2 0.77 2.6E-05 41.2 4.4 54 73-127 2-58 (265)
23 2xio_A Putative deoxyribonucle 84.8 0.7 2.4E-05 43.0 4.1 54 73-127 2-65 (301)
24 2gzx_A Putative TATD related D 84.8 1.3 4.4E-05 39.6 5.8 54 73-127 1-54 (265)
25 4gbu_A NADPH dehydrogenase 1; 80.2 3.9 0.00013 39.9 7.6 22 253-274 98-121 (400)
26 3ngf_A AP endonuclease, family 74.5 5 0.00017 35.9 6.1 43 277-320 24-66 (269)
27 3kws_A Putative sugar isomeras 74.2 6.2 0.00021 35.6 6.7 42 278-319 40-81 (287)
28 4a3u_A NCR, NADH\:flavin oxido 73.2 7.3 0.00025 37.4 7.2 22 253-274 81-104 (358)
29 3gka_A N-ethylmaleimide reduct 72.4 6.1 0.00021 38.1 6.5 22 253-274 89-112 (361)
30 4ab4_A Xenobiotic reductase B; 71.4 6.6 0.00023 37.9 6.5 22 253-274 81-104 (362)
31 2vc7_A Aryldialkylphosphatase; 70.0 4.3 0.00015 37.2 4.6 64 73-136 17-96 (314)
32 4gxw_A Adenosine deaminase; am 69.9 2 6.8E-05 41.8 2.4 29 73-104 30-58 (380)
33 3dtp_E RLC, myosin regulatory 68.6 3.3 0.00011 35.3 3.3 20 84-103 70-89 (196)
34 1z41_A YQJM, probable NADH-dep 68.5 7.4 0.00025 36.8 6.1 22 253-274 85-108 (338)
35 1j6o_A TATD-related deoxyribon 68.2 3.3 0.00011 37.5 3.4 56 71-127 10-65 (268)
36 3e2v_A 3'-5'-exonuclease; stru 67.9 5.9 0.0002 38.9 5.3 55 72-127 12-76 (401)
37 3kru_A NADH:flavin oxidoreduct 67.5 7.3 0.00025 37.3 5.8 22 253-274 83-106 (343)
38 3gr7_A NADPH dehydrogenase; fl 67.1 6 0.00021 37.7 5.1 22 253-274 85-108 (340)
39 3f4w_A Putative hexulose 6 pho 67.0 11 0.00039 32.4 6.6 14 282-295 70-83 (211)
40 3l5a_A NADH/flavin oxidoreduct 65.1 11 0.00038 37.0 6.7 23 252-274 105-129 (419)
41 3p6l_A Sugar phosphate isomera 64.2 15 0.0005 32.5 6.9 43 278-320 24-81 (262)
42 3hgj_A Chromate reductase; TIM 63.8 8.1 0.00028 36.8 5.3 23 252-274 82-106 (349)
43 2hsa_B 12-oxophytodienoate red 63.7 14 0.00049 36.0 7.2 22 253-274 95-118 (402)
44 3lmz_A Putative sugar isomeras 63.5 14 0.00047 32.7 6.6 41 279-319 33-78 (257)
45 1icp_A OPR1, 12-oxophytodienoa 63.4 11 0.00038 36.3 6.3 22 253-274 93-116 (376)
46 3cjp_A Predicted amidohydrolas 63.0 12 0.00042 33.3 6.2 35 73-112 3-37 (272)
47 3l5l_A Xenobiotic reductase A; 62.2 7.9 0.00027 37.1 4.9 22 253-274 82-105 (363)
48 3k30_A Histamine dehydrogenase 60.9 9.9 0.00034 39.4 5.8 22 253-274 91-114 (690)
49 1akh_A Protein (mating-type pr 60.0 11 0.00037 26.2 4.1 25 19-43 2-26 (61)
50 4i6k_A Amidohydrolase family p 59.9 8.1 0.00028 35.4 4.4 54 72-126 25-92 (294)
51 1k77_A EC1530, hypothetical pr 59.4 9.8 0.00034 33.4 4.7 42 278-320 17-58 (260)
52 3iar_A Adenosine deaminase; pu 59.1 4.5 0.00015 39.1 2.6 30 72-104 6-35 (367)
53 3dx5_A Uncharacterized protein 58.8 7.5 0.00026 34.8 3.9 19 279-297 18-36 (286)
54 3tjl_A NADPH dehydrogenase; OL 58.5 24 0.00081 34.6 7.6 22 253-274 94-117 (407)
55 3rys_A Adenosine deaminase 1; 58.2 4.8 0.00016 38.5 2.5 30 72-104 13-42 (343)
56 3pao_A Adenosine deaminase; st 58.2 4.8 0.00016 38.2 2.5 29 73-104 11-39 (326)
57 2gou_A Oxidoreductase, FMN-bin 57.3 18 0.0006 34.8 6.4 22 253-274 83-106 (365)
58 1vyr_A Pentaerythritol tetrani 56.1 17 0.00056 34.9 6.0 22 253-274 83-106 (364)
59 3vni_A Xylose isomerase domain 55.9 14 0.00047 33.2 5.2 43 278-320 19-65 (294)
60 1qtw_A Endonuclease IV; DNA re 55.7 23 0.0008 31.3 6.7 43 276-318 12-63 (285)
61 3inp_A D-ribulose-phosphate 3- 55.6 24 0.00082 32.1 6.7 62 255-318 75-137 (246)
62 2q02_A Putative cytoplasmic pr 55.2 23 0.00079 31.1 6.5 68 251-318 19-101 (272)
63 2qul_A D-tagatose 3-epimerase; 55.0 29 0.001 30.7 7.3 43 278-320 19-65 (290)
64 3kws_A Putative sugar isomeras 54.2 17 0.00057 32.6 5.5 43 88-130 38-80 (287)
65 3ngf_A AP endonuclease, family 54.2 32 0.0011 30.4 7.4 50 81-131 16-65 (269)
66 2ecc_A Homeobox and leucine zi 54.1 22 0.00076 26.5 5.1 22 21-42 2-23 (76)
67 3cny_A Inositol catabolism pro 53.9 10 0.00036 34.0 4.0 68 250-319 30-107 (301)
68 2r14_A Morphinone reductase; H 53.9 17 0.00059 35.0 5.8 22 253-274 87-110 (377)
69 3cqj_A L-ribulose-5-phosphate 53.6 19 0.00063 32.4 5.7 44 277-320 31-84 (295)
70 2ob3_A Parathion hydrolase; me 53.0 18 0.00062 33.8 5.7 60 73-132 16-92 (330)
71 2x7v_A Probable endonuclease 4 52.7 20 0.00069 31.8 5.7 42 277-318 13-63 (287)
72 3ktc_A Xylose isomerase; putat 50.5 15 0.00051 34.1 4.6 43 278-320 35-79 (333)
73 3a24_A Alpha-galactosidase; gl 50.5 30 0.001 36.0 7.1 70 250-319 346-422 (641)
74 2zvr_A Uncharacterized protein 50.5 13 0.00044 33.5 4.0 42 279-320 44-86 (290)
75 3lmz_A Putative sugar isomeras 49.9 31 0.0011 30.3 6.5 57 72-131 17-78 (257)
76 3tva_A Xylose isomerase domain 49.7 20 0.00069 32.1 5.2 42 279-320 24-69 (290)
77 1o94_A Tmadh, trimethylamine d 49.4 16 0.00056 38.1 5.1 22 253-274 86-109 (729)
78 1ps9_A 2,4-dienoyl-COA reducta 49.2 16 0.00056 37.6 5.0 23 252-274 82-106 (671)
79 1i60_A IOLI protein; beta barr 48.9 17 0.00057 32.1 4.5 41 251-291 14-61 (278)
80 3h4u_A Amidohydrolase; signatu 48.1 34 0.0012 32.9 6.9 62 73-136 88-183 (479)
81 3qc0_A Sugar isomerase; TIM ba 47.8 7.1 0.00024 34.6 1.8 13 252-264 19-31 (275)
82 3l23_A Sugar phosphate isomera 47.1 20 0.00069 32.7 4.9 43 278-320 31-77 (303)
83 2qw5_A Xylose isomerase-like T 46.6 34 0.0012 31.5 6.4 41 280-320 35-86 (335)
84 3aam_A Endonuclease IV, endoiv 45.8 42 0.0014 29.6 6.7 39 278-316 16-63 (270)
85 3qxb_A Putative xylose isomera 45.7 28 0.00097 31.7 5.7 41 280-320 39-88 (316)
86 1bf6_A Phosphotriesterase homo 45.6 17 0.00059 32.4 4.1 62 73-134 6-80 (291)
87 2g0w_A LMO2234 protein; putati 44.6 29 0.001 31.3 5.5 13 252-264 37-49 (296)
88 1qwg_A PSL synthase;, (2R)-pho 43.6 32 0.0011 31.5 5.5 66 253-318 57-130 (251)
89 3kts_A Glycerol uptake operon 43.4 65 0.0022 28.2 7.3 64 249-320 39-106 (192)
90 2zds_A Putative DNA-binding pr 41.9 53 0.0018 29.8 6.9 44 277-320 16-69 (340)
91 1k77_A EC1530, hypothetical pr 41.6 30 0.001 30.1 5.0 45 87-132 14-58 (260)
92 3u0h_A Xylose isomerase domain 41.3 14 0.00049 32.6 2.8 41 279-319 19-64 (281)
93 3s5o_A 4-hydroxy-2-oxoglutarat 40.7 95 0.0032 28.7 8.5 65 255-319 71-146 (307)
94 2pgf_A Adenosine deaminase; me 40.5 17 0.00057 34.8 3.2 28 73-103 45-72 (371)
95 3vni_A Xylose isomerase domain 40.4 35 0.0012 30.4 5.3 59 74-132 3-65 (294)
96 3ctl_A D-allulose-6-phosphate 40.1 53 0.0018 29.3 6.3 62 255-318 47-109 (231)
97 3aal_A Probable endonuclease 4 39.5 61 0.0021 29.2 6.9 39 278-316 20-67 (303)
98 2q02_A Putative cytoplasmic pr 39.5 74 0.0025 27.7 7.3 46 86-131 17-68 (272)
99 2hk0_A D-psicose 3-epimerase; 39.3 26 0.00088 31.8 4.2 42 278-320 39-84 (309)
100 3fkr_A L-2-keto-3-deoxyarabona 39.2 69 0.0024 29.7 7.3 57 263-319 75-141 (309)
101 3obe_A Sugar phosphate isomera 38.0 38 0.0013 30.9 5.2 14 252-265 37-50 (305)
102 3dz1_A Dihydrodipicolinate syn 37.3 61 0.0021 30.1 6.6 64 256-319 66-138 (313)
103 3ajx_A 3-hexulose-6-phosphate 37.2 69 0.0024 27.2 6.5 20 254-273 67-86 (207)
104 1yx1_A Hypothetical protein PA 37.0 21 0.00073 31.6 3.2 12 306-317 88-99 (264)
105 1vkf_A Glycerol uptake operon 36.9 79 0.0027 27.6 6.7 62 251-320 43-107 (188)
106 1i60_A IOLI protein; beta barr 36.8 77 0.0026 27.6 6.9 45 87-131 13-63 (278)
107 4f0r_A 5-methylthioadenosine/S 36.1 80 0.0027 29.8 7.4 61 73-137 65-155 (447)
108 2wvv_A Alpha-L-fucosidase; alp 35.7 42 0.0014 33.2 5.3 54 83-138 73-147 (450)
109 4dyk_A Amidohydrolase; adenosi 35.6 53 0.0018 31.2 6.0 61 73-137 67-157 (451)
110 3lnp_A Amidohydrolase family p 35.1 80 0.0027 30.1 7.2 61 73-137 87-177 (468)
111 2f6k_A Metal-dependent hydrola 35.1 27 0.00091 31.5 3.6 36 73-108 2-55 (307)
112 2yxg_A DHDPS, dihydrodipicolin 35.0 1.2E+02 0.0042 27.6 8.2 57 263-319 67-130 (289)
113 3l21_A DHDPS, dihydrodipicolin 35.0 1E+02 0.0034 28.5 7.6 57 263-319 82-145 (304)
114 2ehh_A DHDPS, dihydrodipicolin 34.9 1.4E+02 0.0048 27.3 8.6 56 263-318 67-129 (294)
115 1bxb_A Xylose isomerase; xylos 34.6 46 0.0016 31.6 5.4 44 277-320 34-87 (387)
116 3flu_A DHDPS, dihydrodipicolin 34.5 1.2E+02 0.004 27.9 8.0 57 263-319 74-137 (297)
117 3ur8_A Glucan endo-1,3-beta-D- 34.4 79 0.0027 29.8 6.8 48 85-137 12-59 (323)
118 2qul_A D-tagatose 3-epimerase; 34.3 52 0.0018 29.1 5.4 45 88-132 17-65 (290)
119 3m5v_A DHDPS, dihydrodipicolin 34.3 1.3E+02 0.0045 27.6 8.3 55 265-319 77-138 (301)
120 1xim_A D-xylose isomerase; iso 34.1 42 0.0014 32.0 5.0 44 277-320 34-87 (393)
121 2mys_B Myosin; muscle protein, 33.8 50 0.0017 26.3 4.8 40 27-102 17-56 (166)
122 3nqb_A Adenine deaminase 2; PS 33.6 15 0.00053 37.6 1.8 59 73-134 90-154 (608)
123 3cpr_A Dihydrodipicolinate syn 33.5 1.5E+02 0.0051 27.3 8.6 64 256-319 74-146 (304)
124 2zds_A Putative DNA-binding pr 33.4 91 0.0031 28.2 7.0 45 87-131 14-68 (340)
125 1f6k_A N-acetylneuraminate lya 33.1 1.3E+02 0.0043 27.6 7.9 56 263-318 71-133 (293)
126 4dzh_A Amidohydrolase; adenosi 33.1 75 0.0026 30.6 6.7 61 73-137 74-164 (472)
127 3ovp_A Ribulose-phosphate 3-ep 33.0 80 0.0027 28.0 6.3 62 255-318 52-115 (228)
128 3jx9_A Putative phosphoheptose 32.6 22 0.00076 30.5 2.4 29 86-114 88-118 (170)
129 3na8_A Putative dihydrodipicol 32.4 1E+02 0.0035 28.7 7.3 57 263-319 91-154 (315)
130 2da2_A Alpha-fetoprotein enhan 32.2 1.1E+02 0.0037 21.4 5.8 22 22-43 7-28 (70)
131 3daq_A DHDPS, dihydrodipicolin 32.0 1E+02 0.0035 28.3 7.1 57 263-319 69-132 (292)
132 3si9_A DHDPS, dihydrodipicolin 31.5 1.1E+02 0.0036 28.6 7.2 57 263-319 89-152 (315)
133 3tak_A DHDPS, dihydrodipicolin 31.1 1.3E+02 0.0044 27.5 7.6 57 263-319 68-131 (291)
134 2zxd_A Alpha-L-fucosidase, put 31.1 95 0.0032 30.7 7.1 53 83-137 100-173 (455)
135 3fst_A 5,10-methylenetetrahydr 29.9 3.4E+02 0.011 25.1 13.7 67 250-316 129-203 (304)
136 1olt_A Oxygen-independent copr 29.8 38 0.0013 33.1 3.9 77 237-317 109-204 (457)
137 1bw5_A ISL-1HD, insulin gene e 29.7 1.1E+02 0.0037 21.2 5.4 22 22-43 3-24 (66)
138 3i5g_B Myosin regulatory light 29.6 89 0.003 25.2 5.7 43 25-103 6-48 (153)
139 2dmu_A Homeobox protein goosec 29.6 1.1E+02 0.0039 21.4 5.6 21 23-43 8-28 (70)
140 1wa3_A 2-keto-3-deoxy-6-phosph 29.6 77 0.0026 26.9 5.5 41 88-134 71-111 (205)
141 2ood_A BLR3880 protein; PSI-II 29.6 58 0.002 31.5 5.2 62 73-136 74-166 (475)
142 2g0w_A LMO2234 protein; putati 29.6 75 0.0026 28.5 5.7 46 87-132 35-86 (296)
143 2yxb_A Coenzyme B12-dependent 29.5 92 0.0032 25.9 5.8 50 85-134 53-107 (161)
144 1fjl_A Paired protein; DNA-bin 29.5 1E+02 0.0036 22.3 5.5 23 21-43 17-39 (81)
145 2wkj_A N-acetylneuraminate lya 29.4 1.5E+02 0.0052 27.2 7.8 56 263-318 78-141 (303)
146 1xky_A Dihydrodipicolinate syn 29.3 1.5E+02 0.0052 27.2 7.8 56 263-318 79-141 (301)
147 3d0c_A Dihydrodipicolinate syn 29.2 1.5E+02 0.005 27.5 7.7 55 263-318 79-140 (314)
148 4e38_A Keto-hydroxyglutarate-a 29.2 2E+02 0.0069 25.6 8.3 61 253-315 24-84 (232)
149 3jr2_A Hexulose-6-phosphate sy 29.0 1E+02 0.0034 26.7 6.2 16 256-271 75-90 (218)
150 1muw_A Xylose isomerase; atomi 28.7 56 0.0019 31.0 4.8 43 278-320 35-87 (386)
151 3jr2_A Hexulose-6-phosphate sy 28.7 70 0.0024 27.7 5.1 52 72-130 61-112 (218)
152 2vc6_A MOSA, dihydrodipicolina 28.5 1.3E+02 0.0045 27.5 7.2 55 264-318 68-129 (292)
153 2d59_A Hypothetical protein PH 28.4 71 0.0024 25.9 4.8 38 91-131 91-128 (144)
154 3em5_A Beta-1,3-glucanase; gly 28.2 97 0.0033 29.1 6.3 46 85-135 11-56 (316)
155 2p10_A MLL9387 protein; putati 28.2 33 0.0011 32.0 2.9 61 258-319 87-167 (286)
156 2z00_A Dihydroorotase; zinc bi 28.1 56 0.0019 30.6 4.7 59 73-131 50-116 (426)
157 3qze_A DHDPS, dihydrodipicolin 27.8 2E+02 0.0068 26.6 8.4 57 263-319 90-153 (314)
158 3cny_A Inositol catabolism pro 27.5 80 0.0027 27.9 5.4 46 86-133 29-74 (301)
159 1x92_A APC5045, phosphoheptose 27.0 41 0.0014 28.4 3.2 25 87-111 126-150 (199)
160 2e1o_A Homeobox protein PRH; D 27.0 1.5E+02 0.005 20.8 5.8 21 23-43 8-28 (70)
161 2dmt_A Homeobox protein BARH-l 26.7 1.1E+02 0.0039 22.0 5.3 22 22-43 17-38 (80)
162 3sho_A Transcriptional regulat 26.7 44 0.0015 27.8 3.3 25 88-112 101-125 (187)
163 2cyg_A Beta-1, 3-glucananse; e 26.6 1.6E+02 0.0055 27.5 7.5 48 85-137 10-57 (312)
164 2yva_A DNAA initiator-associat 26.5 43 0.0015 28.2 3.2 25 87-111 122-146 (196)
165 2r8w_A AGR_C_1641P; APC7498, d 26.2 1.5E+02 0.0051 27.7 7.3 56 264-319 102-164 (332)
166 3cqj_A L-ribulose-5-phosphate 26.2 71 0.0024 28.4 4.8 46 86-131 28-83 (295)
167 3u0h_A Xylose isomerase domain 26.2 32 0.0011 30.2 2.4 56 73-131 4-64 (281)
168 1xla_A D-xylose isomerase; iso 26.1 66 0.0023 30.6 4.8 43 278-320 35-87 (394)
169 2v9d_A YAGE; dihydrodipicolini 26.0 1.6E+02 0.0054 27.7 7.4 56 263-318 98-160 (343)
170 2eja_A URO-D, UPD, uroporphyri 25.9 1E+02 0.0035 28.5 6.0 44 251-297 217-260 (338)
171 1u83_A Phosphosulfolactate syn 25.8 1.1E+02 0.0037 28.4 5.9 64 253-317 82-153 (276)
172 3guw_A Uncharacterized protein 25.7 29 0.00099 31.5 2.1 34 73-111 1-34 (261)
173 2rfg_A Dihydrodipicolinate syn 25.7 1.4E+02 0.0049 27.3 6.9 55 264-318 68-129 (297)
174 3aal_A Probable endonuclease 4 25.4 1.8E+02 0.0062 25.9 7.5 52 77-129 8-68 (303)
175 1o5k_A DHDPS, dihydrodipicolin 25.2 1.6E+02 0.0055 27.1 7.2 55 264-318 80-141 (306)
176 1x2n_A Homeobox protein pknox1 24.7 1.7E+02 0.0058 20.6 5.8 22 22-43 7-28 (73)
177 2gwg_A 4-oxalomesaconate hydra 24.6 2.1E+02 0.0073 26.2 8.0 64 256-319 96-176 (350)
178 1mnm_C Protein (MAT alpha-2 tr 24.6 1.5E+02 0.005 21.8 5.6 20 24-43 29-48 (87)
179 3ovp_A Ribulose-phosphate 3-ep 24.6 1.1E+02 0.0038 27.0 5.7 58 72-138 64-121 (228)
180 3mpg_A Dihydroorotase, dhoase; 24.4 81 0.0028 29.8 5.1 55 73-127 54-115 (428)
181 2yrr_A Aminotransferase, class 24.3 1.2E+02 0.004 27.0 6.0 47 85-131 108-158 (353)
182 3p6l_A Sugar phosphate isomera 24.0 67 0.0023 28.0 4.2 56 73-131 10-80 (262)
183 1tk9_A Phosphoheptose isomeras 23.4 46 0.0016 27.7 2.8 23 88-110 124-146 (188)
184 3ff4_A Uncharacterized protein 23.3 98 0.0034 24.7 4.6 38 91-131 72-109 (122)
185 2ffi_A 2-pyrone-4,6-dicarboxyl 23.1 28 0.00096 31.1 1.4 56 72-127 12-80 (288)
186 1m3s_A Hypothetical protein YC 23.1 54 0.0019 27.2 3.2 24 88-111 93-116 (186)
187 3eb2_A Putative dihydrodipicol 23.1 1E+02 0.0035 28.4 5.3 57 263-319 71-134 (300)
188 3mdu_A N-formimino-L-glutamate 23.0 1.6E+02 0.0055 28.0 7.0 61 73-133 51-155 (453)
189 1aq0_A 1,3-1,4-beta-glucanase; 22.9 1.9E+02 0.0064 26.9 7.2 47 85-136 10-56 (306)
190 1wi3_A DNA-binding protein SAT 22.9 70 0.0024 23.5 3.2 26 24-49 9-34 (71)
191 3e96_A Dihydrodipicolinate syn 22.9 1.7E+02 0.0057 27.1 6.8 54 264-319 80-141 (316)
192 3qfe_A Putative dihydrodipicol 22.8 1.4E+02 0.0046 27.8 6.2 57 263-319 78-143 (318)
193 2xij_A Methylmalonyl-COA mutas 22.8 1.2E+02 0.004 32.2 6.2 47 87-133 641-692 (762)
194 1rpx_A Protein (ribulose-phosp 22.8 2.6E+02 0.0089 24.0 7.8 49 78-131 72-122 (230)
195 2djn_A Homeobox protein DLX-5; 22.7 1.8E+02 0.006 20.4 5.5 21 23-43 8-28 (70)
196 2ojp_A DHDPS, dihydrodipicolin 22.6 1.4E+02 0.0047 27.3 6.1 55 264-318 69-130 (292)
197 1914_A Signal recognition part 22.5 11 0.00039 34.1 -1.4 26 8-33 114-139 (232)
198 4do7_A Amidohydrolase 2; enzym 22.5 81 0.0028 28.6 4.5 56 72-127 3-74 (303)
199 3l12_A Putative glycerophospho 22.3 1.1E+02 0.0037 28.2 5.3 54 254-317 258-311 (313)
200 3zrp_A Serine-pyruvate aminotr 22.3 83 0.0028 28.5 4.6 48 85-132 111-162 (384)
201 2dmq_A LIM/homeobox protein LH 22.2 1.7E+02 0.0058 21.0 5.4 22 22-43 7-28 (80)
202 1vhc_A Putative KHG/KDPG aldol 22.2 2.9E+02 0.0098 24.2 8.0 62 252-315 6-67 (224)
203 1wdp_A Beta-amylase; (beta/alp 22.2 2E+02 0.0067 28.8 7.3 40 279-318 36-86 (495)
204 3tha_A Tryptophan synthase alp 22.1 62 0.0021 29.5 3.5 46 88-134 103-148 (252)
205 3isl_A Purine catabolism prote 22.1 1.2E+02 0.004 27.9 5.7 48 85-132 120-171 (416)
206 1wh5_A ZF-HD homeobox family p 22.1 2.2E+02 0.0076 20.7 6.1 22 23-44 18-39 (80)
207 3ktc_A Xylose isomerase; putat 22.0 1.6E+02 0.0055 26.8 6.5 45 87-131 32-78 (333)
208 3nav_A Tryptophan synthase alp 21.9 1E+02 0.0036 28.1 5.1 43 89-132 113-155 (271)
209 2d73_A Alpha-glucosidase SUSB; 21.9 2.5E+02 0.0087 29.5 8.5 69 250-319 417-505 (738)
210 2xbl_A Phosphoheptose isomeras 21.8 59 0.002 27.2 3.2 24 88-111 130-153 (198)
211 2m0c_A Homeobox protein arista 21.8 1.4E+02 0.0047 21.0 4.8 22 22-43 9-30 (75)
212 2vi6_A Homeobox protein nanog; 21.8 1.5E+02 0.0051 20.1 4.8 21 23-43 4-24 (62)
213 2dvt_A Thermophilic reversible 21.6 1.8E+02 0.0061 26.0 6.7 65 255-319 83-162 (327)
214 2xhz_A KDSD, YRBH, arabinose 5 21.6 57 0.0019 27.0 3.0 24 88-111 110-133 (183)
215 2cra_A Homeobox protein HOX-B1 21.6 2.1E+02 0.0071 19.9 5.7 21 23-43 8-28 (70)
216 3lrk_A Alpha-galactosidase 1; 21.5 1.5E+02 0.0051 29.6 6.4 51 247-297 89-150 (479)
217 1k61_A Mating-type protein alp 21.5 1.9E+02 0.0065 19.4 5.4 19 25-43 1-19 (60)
218 2zuv_A Lacto-N-biose phosphory 21.5 73 0.0025 33.4 4.2 17 252-268 292-308 (759)
219 2dms_A Homeobox protein OTX2; 21.5 2E+02 0.0069 20.6 5.8 22 22-43 7-28 (80)
220 3t7v_A Methylornithine synthas 21.4 1.3E+02 0.0043 27.9 5.7 65 253-319 128-205 (350)
221 3vnd_A TSA, tryptophan synthas 21.2 90 0.0031 28.5 4.5 45 89-134 111-155 (267)
222 2f6k_A Metal-dependent hydrola 21.2 1.4E+02 0.0048 26.5 5.8 65 255-319 79-152 (307)
223 1req_A Methylmalonyl-COA mutas 21.1 1.2E+02 0.0042 31.8 5.9 47 87-133 633-684 (727)
224 2hmc_A AGR_L_411P, dihydrodipi 21.0 1.5E+02 0.0051 28.0 6.1 63 255-318 83-154 (344)
225 3tdn_A FLR symmetric alpha-bet 20.9 1.6E+02 0.0054 25.8 6.0 50 87-136 34-88 (247)
226 1xrs_B D-lysine 5,6-aminomutas 20.9 1.5E+02 0.005 27.1 5.8 41 87-127 166-211 (262)
227 4h41_A Putative alpha-L-fucosi 20.9 1.1E+02 0.0037 29.1 5.1 51 87-137 50-123 (340)
228 3qxb_A Putative xylose isomera 20.8 2.3E+02 0.008 25.3 7.3 43 89-131 36-87 (316)
229 1xx1_A Smase I, sphingomyelina 20.6 61 0.0021 29.2 3.2 27 266-295 7-33 (285)
230 2dr1_A PH1308 protein, 386AA l 20.6 1.7E+02 0.0059 26.4 6.4 47 85-131 129-180 (386)
231 3qc0_A Sugar isomerase; TIM ba 20.4 49 0.0017 28.9 2.4 45 87-131 17-62 (275)
232 2whl_A Beta-mannanase, baman5; 20.4 1.3E+02 0.0044 27.0 5.4 14 306-319 68-81 (294)
233 1geq_A Tryptophan synthase alp 20.3 1.4E+02 0.0048 26.0 5.5 43 91-134 98-140 (248)
234 3a5f_A Dihydrodipicolinate syn 20.2 1.2E+02 0.0041 27.7 5.2 56 263-318 68-130 (291)
235 2h1k_A IPF-1, pancreatic and d 20.2 2E+02 0.0067 19.6 5.2 22 22-43 3-24 (63)
236 2xfr_A Beta-amylase; hydrolase 20.1 2.3E+02 0.0078 28.6 7.3 40 279-318 34-84 (535)
237 4e38_A Keto-hydroxyglutarate-a 20.0 1.1E+02 0.0037 27.5 4.6 42 88-135 94-135 (232)
238 3eyp_A Putative alpha-L-fucosi 20.0 1.1E+02 0.0039 30.2 5.2 51 85-137 51-125 (469)
No 1
>3o0f_A Putative metal-dependent phosphoesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: AMP; 1.94A {Bifidobacterium adolescentis} PDB: 3e0f_A*
Probab=100.00 E-value=2.6e-58 Score=442.94 Aligned_cols=256 Identities=28% Similarity=0.409 Sum_probs=233.6
Q ss_pred CCceEEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcCCeEEEEEEEEeeeccCCCCCCC
Q 018376 70 DNNVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVEISTIFCQRGSESEE 149 (357)
Q Consensus 70 ~~~~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vi~GiEis~~~~~~~~~~g~ 149 (357)
.++|++||||||.||||.++|++++++|++.|++.|||||||++.|+.++.+++++.||++|+|+||++.+ .+.
T Consensus 10 ~m~~~~DLH~Hs~~SDG~~~~~elv~~A~~~Gl~~iaiTDH~~~~g~~~~~~~~~~~gi~~i~GvEis~~~------~~~ 83 (301)
T 3o0f_A 10 PPAQGWDIHCHTVFSDGTETPRTLVEQARKLGLHGVAIADHDTTAGWDEATEASEEIGLPLLLGTEITAVD------EDV 83 (301)
T ss_dssp CCSSSEEEEECCTTTTCSSCHHHHHHHHHHTTCSEEEECCBTCCTTHHHHHHHHHHHTCCEEEEEEEEEEE------TTE
T ss_pred cccceEEeeECCCCCCCCCCHHHHHHHHHHcCCCEEEEcCCCccccHHHHHHHHHhcCCEEEEEEEEEEEe------CCc
Confidence 46689999999999999999999999999999999999999999999999999999999999999999998 577
Q ss_pred cEEEEEEeccCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCC--CCCChHHHHHHHHHcCcc
Q 018376 150 PVHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKWEHVAKIAGKG--VAPGRLHVARAMVEAGHV 227 (357)
Q Consensus 150 ~vHiLgy~~d~~~~~~~~l~~~l~~i~~~R~~r~~~~i~~L~~~g~~i~~e~v~~~a~~~--~~~~~~hia~aLv~~g~~ 227 (357)
++|||||++|. ..+.|.++++.+++.|.+|+++|+++|++. ++++||++.++++++ ..+||+|||++|+++||+
T Consensus 84 ~vHiL~~~~d~---~~~~l~~~l~~~~~~R~~R~~~i~~~L~~~-~~i~~e~v~~~a~~~~~~~igR~HiA~~Lv~~G~~ 159 (301)
T 3o0f_A 84 SVHMLAFQYDP---SNEHISSMFANTRAARLRRTKRMVERLSQD-FPITWDDVLAQVKEGERTTIGRPHIADALVAAGVY 159 (301)
T ss_dssp EEEEEEESCCT---TCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SSCCHHHHHTTCTTGGGSCCCHHHHHHHHHHTTSC
T ss_pred eEEEEEEcCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHHHHHHHhcCCCCCCcCHHHHHHHHHHcCCC
Confidence 89999999874 357899999999999999999999999999 999999998877532 469999999999999999
Q ss_pred ccHHHHHHHHhhCCCCcccCCCCCCHHHHHHHHHHcCCeEEeeCCCCCC-----ChHHHHHHHHHcCCcEEEeecCCCcH
Q 018376 228 ENLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALK-----NPAAIIRKLKDVGLHGLEVYRSDGKL 302 (357)
Q Consensus 228 ~~~~~~f~~yl~~~~~~yv~~~~~~~eevI~~I~~aGGvaVLAHP~~~~-----~~~~li~~l~~~GlDGIEv~~~~~~~ 302 (357)
.+..++|++||+.++|+|||..+++++|+|++|+++||++|||||+++. ...+++.+|+++|+|||||+|++++.
T Consensus 160 ~~~~~aF~~~l~~g~~~yV~~~~~~~~eaI~~I~~aGGvaVLAHP~r~~~~r~~~~~~~l~~l~~~GldgIEv~~~~~~~ 239 (301)
T 3o0f_A 160 ETRSDAFADAVSAKSKYYIPTPSPSTHEVIAAVKGAGGVVVAAHAGDPQRNRRLLSDEQLDAMIADGLDGLEVWHRGNPP 239 (301)
T ss_dssp SSHHHHHTTTTSTTSTTCCCCCCCBHHHHHHHHHHTTCEEEECSTTCTTTCSSCCCHHHHHHHHHHTCCEEEEESTTSCH
T ss_pred CCHHHHHHHHHcCCCccccCccCCCHHHHHHHHHHCCCEEEecChhhhccccccCcHHHHHHHHHCCCCEEEEeCCCCCH
Confidence 9999999999999999999999999999999999999999999997653 34678999999999999999998865
Q ss_pred HH-HHHHHHHHhcCCceeecccccCCCCCCCCChhhhhh
Q 018376 303 VD-VNFLEKIDNFLLLLCLRQISNCDCALYPYPWQLLYD 340 (357)
Q Consensus 303 ~~-~~~~~lA~~~~Ll~t~~~~~GSD~h~~~~~~~~l~~ 340 (357)
.+ ..+.++|+++||+.|+ |||+|. +.+|..|+.
T Consensus 240 ~~~~~~~~lA~~~gL~~tg----GSD~Hg-~~~~~~lG~ 273 (301)
T 3o0f_A 240 EQRERLLTIAARHDLLVTG----GSDWHG-KGKPNGLGE 273 (301)
T ss_dssp HHHHHHHHHHHHHTCEEEE----CCCBCG-GGSSCCTTS
T ss_pred HHHHHHHHHHHHcCCceEE----EcCCCC-CCCCCcCCC
Confidence 54 5799999999999997 999994 444555653
No 2
>2yb1_A Amidohydrolase; HET: AMP; 1.90A {Chromobacterium violaceum} PDB: 2yb4_A
Probab=100.00 E-value=4.9e-49 Score=377.20 Aligned_cols=257 Identities=30% Similarity=0.394 Sum_probs=227.4
Q ss_pred ceEEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcCCeEEEEEEEEeeeccCCCCCCCcE
Q 018376 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVEISTIFCQRGSESEEPV 151 (357)
Q Consensus 72 ~~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vi~GiEis~~~~~~~~~~g~~v 151 (357)
++++||||||.||||..+|++++++|++.|++.|||||||++.|+.++.+++++.||++|+|+|+++.+ .+.++
T Consensus 1 M~~~DLH~Ht~~SDg~~~~~elv~~A~~~Gl~~iaiTDH~~~~g~~~~~~~~~~~gi~vi~G~Ei~~~~------~~~~~ 74 (292)
T 2yb1_A 1 MANIDLHFHSRTSDGALTPTEVIDRAAARAPALLALTDHDCTGGLAEAAAAAARRGIPFLNGVEVSVSW------GRHTV 74 (292)
T ss_dssp -CCEECCBCCTTTTCSSCHHHHHHHHHTTCCSEEEECCBTCCTTHHHHHHHHHHTTCCEEEEEEEEEEE------TTEEE
T ss_pred CCccccccCCCccCCCCCHHHHHHHHHHCCCCEEEEecCCccccHHHHHHHHHHcCCEEEEEEEEEEec------CCcee
Confidence 367999999999999999999999999999999999999999999999999988999999999999987 46679
Q ss_pred EEEEEeccCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCCCCCChHHHHHHHHHcCccccHH
Q 018376 152 HILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKWEHVAKIAGKGVAPGRLHVARAMVEAGHVENLK 231 (357)
Q Consensus 152 HiLgy~~d~~~~~~~~l~~~l~~i~~~R~~r~~~~i~~L~~~g~~i~~e~v~~~a~~~~~~~~~hia~aLv~~g~~~~~~ 231 (357)
|+|+|+.+.. ...+.+++..+++.|.+|+++|+++|++.|++++++++..+++++..++++|++++|++.|++.+..
T Consensus 75 hil~~~~d~~---~~~l~~~~~~~~~~r~~r~~~~~~~l~~~g~~~~~~~v~~~a~~~~~igr~H~a~~lv~~g~~~~~~ 151 (292)
T 2yb1_A 75 HIVGLGIDPA---EPALAAGLKSIREGRLERARQMGASLEAAGIAGCFDGAMRWCDNPEMISRTHFARHLVDSGAVKDMR 151 (292)
T ss_dssp EEEEESCCTT---CHHHHHHHHHHHTTHHHHHHHHHHHHHHTTCTTHHHHHHTTCSSGGGCCHHHHHHHHHHTTSSSSHH
T ss_pred EEEEEecCcc---cHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCHHHHHHhccCCCCcCHHHHHHHHHHcCCcCCHH
Confidence 9999998642 3578889999999999999999999999999999999988765555789999999999999999999
Q ss_pred HHHHHHhhCCCCcccCCCCCCHHHHHHHHHHcCCeEEeeCCCCCCCh----HHHHHHHHHcCCcEEEeecCCCcHHH-HH
Q 018376 232 QAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKNP----AAIIRKLKDVGLHGLEVYRSDGKLVD-VN 306 (357)
Q Consensus 232 ~~f~~yl~~~~~~yv~~~~~~~eevI~~I~~aGGvaVLAHP~~~~~~----~~li~~l~~~GlDGIEv~~~~~~~~~-~~ 306 (357)
++|++||+.++|+|++..+++++++|++|+++||++|||||+++... .++++++++.|++||||+++.+.... ..
T Consensus 152 ~~f~~yl~~~~~~~v~~~~~~~~~~i~~i~~~Gg~~VlAHP~r~~~~~~~~~~~l~~l~~~g~~giEv~~~~~~~~~~~~ 231 (292)
T 2yb1_A 152 TVFRKYLTPGKPGYVSHQWASLEDAVGWIVGAGGMAVIAHPGRYDMGRTLIERLILDFQAAGGQGIEVASGSHSLDDMHK 231 (292)
T ss_dssp HHHHHSSSTTSTTCCCCCCBCHHHHHHHHHHTTCEEEECCGGGSSCCHHHHHHHHHHHHHTTCCEEEEEETTCCHHHHHH
T ss_pred HHHHHHHccCCceeccCCCCCHHHHHHHHHHcCCEEEEECcCccccchhhHHHHHHHHHhCCCCEEEEeCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999987632 46788888999999999999886433 57
Q ss_pred HHHHHHhcCCceeecccccCCCCCCCCChhhhhhh
Q 018376 307 FLEKIDNFLLLLCLRQISNCDCALYPYPWQLLYDF 341 (357)
Q Consensus 307 ~~~lA~~~~Ll~t~~~~~GSD~h~~~~~~~~l~~~ 341 (357)
+.++|+++||+.|+ |||+|....|+..++..
T Consensus 232 ~~~~a~~~gl~~t~----GSDaH~~~~~~~~lG~~ 262 (292)
T 2yb1_A 232 FALHADRHGLYASS----GSDFHAPGEGGRDVGHT 262 (292)
T ss_dssp HHHHHHHHTCEEEE----ECCBCSTTC---CTTCC
T ss_pred HHHHHHHcCCceEE----eeCCCCcCCCCCcCCCC
Confidence 89999999999987 99999432255566643
No 3
>3e38_A Two-domain protein containing predicted PHP-like dependent phosphoesterase; structural genomics; 2.20A {Bacteroides vulgatus atcc 8482}
Probab=99.95 E-value=1.5e-27 Score=232.96 Aligned_cols=164 Identities=23% Similarity=0.252 Sum_probs=133.1
Q ss_pred CCCceEEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecC------------CCCCCHHHHHHHHHhcCCeEEEEEEE
Q 018376 69 VDNNVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDH------------DTMSGIPEAIETARRFGMKIIPGVEI 136 (357)
Q Consensus 69 ~~~~~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~iaITDH------------dt~~g~~~~~~~a~~~gi~vi~GiEi 136 (357)
...|+++|||+||.||||..+|++++++|++.|++.|||||| |++.|+.++.+.+++.++.+|+|+|+
T Consensus 15 ~~~~~~~DlH~Ht~~SDg~~~~~elv~~A~~~Gl~~iaiTDH~~~~~~~~~~~~d~~~g~~~~~~~a~~~gi~vi~G~Ei 94 (343)
T 3e38_A 15 GYTTLKCDFHMHSVFSDGLVWPTVRVDEAYRDGLDAISLTEHIEYRPHKQDVVSDHNRSFDLCREQAEKLGILLIKGSEI 94 (343)
T ss_dssp TCEEEEEECCBCCTTTTCSBCHHHHHHHHHHTTCSEECCEEESSCCTTTTTBCCCTTHHHHHHHHHHHHHTCEECCEEEE
T ss_pred CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHcCCCEEEECCCCcccccccccchhHHHHHHHHHHHHHhCCCEEEEEEEE
Confidence 356899999999999999999999999999999999999999 56778899999998899999999999
Q ss_pred EeeeccCCCCCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCCCCCChHH
Q 018376 137 STIFCQRGSESEEPVHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKWEHVAKIAGKGVAPGRLH 216 (357)
Q Consensus 137 s~~~~~~~~~~g~~vHiLgy~~d~~~~~~~~l~~~l~~i~~~R~~r~~~~i~~L~~~g~~i~~e~v~~~a~~~~~~~~~h 216 (357)
++.+ ..+|+|+|+.+. +
T Consensus 95 ~~~~--------~~gHiL~l~~~~----~--------------------------------------------------- 111 (343)
T 3e38_A 95 TRAM--------APGHFNAIFLSD----S--------------------------------------------------- 111 (343)
T ss_dssp ECST--------TTCEEEEESCSC----S---------------------------------------------------
T ss_pred EEcC--------CCcEEEEEeCCC----C---------------------------------------------------
Confidence 9852 358999998531 0
Q ss_pred HHHHHHHcCccccHHHHHHHHhhCCCCcccCCCCCCHHHHHHHHHHcCCeEEeeCCCCCCC-------hHHHHHHH-HHc
Q 018376 217 VARAMVEAGHVENLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKN-------PAAIIRKL-KDV 288 (357)
Q Consensus 217 ia~aLv~~g~~~~~~~~f~~yl~~~~~~yv~~~~~~~eevI~~I~~aGGvaVLAHP~~~~~-------~~~li~~l-~~~ 288 (357)
.+....+++++++.+++.||++|+|||++... ... ++++ ...
T Consensus 112 -----------------------------~~~~~~~~~eli~~v~~~Ggl~iiAHP~r~~~~~~g~~~~~~-~~e~l~~~ 161 (343)
T 3e38_A 112 -----------------------------NPLEQKDYKDAFREAKKQGAFMFWNHPGWDSQQPDTTKWWPE-HTALYQEG 161 (343)
T ss_dssp -----------------------------GGGCCSSHHHHHHHHHHTTCEEEECCTTCTTTSSSCCCCCHH-HHHHHHTT
T ss_pred -----------------------------CCCcccCHHHHHHHHHHCCCEEEEeCCCCcccCccccccccc-hHHHhccc
Confidence 00012468899999999999999999998531 111 3333 347
Q ss_pred CCcEEEeecCCCcHHHHHHHHHHHhcCCceeecccccCCCCCC
Q 018376 289 GLHGLEVYRSDGKLVDVNFLEKIDNFLLLLCLRQISNCDCALY 331 (357)
Q Consensus 289 GlDGIEv~~~~~~~~~~~~~~lA~~~~Ll~t~~~~~GSD~h~~ 331 (357)
++||||||++..... +...+|+.++|..++ |||+|..
T Consensus 162 ~iDaIEv~N~~~~n~--~A~~la~~~~l~~~~----GSDaH~~ 198 (343)
T 3e38_A 162 CMHGIEVANGHLYMP--EAIQWCLDKNLTMIG----TSDIHQP 198 (343)
T ss_dssp CCSEEEEEETTEECT--HHHHHHHHHTCEEEE----ECCBCSC
T ss_pred CccEEEEcCCCCccH--HHHHHHhhCCCceEe----ECCCCCC
Confidence 899999999875222 356899999999886 9999943
No 4
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus thermophilus} PDB: 2yz5_A 2z4g_A
Probab=99.89 E-value=3.5e-23 Score=193.11 Aligned_cols=180 Identities=19% Similarity=0.213 Sum_probs=120.0
Q ss_pred EEceeeeCcCC-CCCCCHHHHHHHHHHcCCcEEEEecCCCCC-------C---------HHHHHHHHHhc-CCeEEEEEE
Q 018376 74 VFELHSHSNFS-DGYLSPSKLVERAHCNGVKVLALTDHDTMS-------G---------IPEAIETARRF-GMKIIPGVE 135 (357)
Q Consensus 74 ~~DLH~HT~~S-DG~~tp~elv~~A~~~Gl~~iaITDHdt~~-------g---------~~~~~~~a~~~-gi~vi~GiE 135 (357)
++||||||.+| ||..+|++++++|++.|++.||||||+++. + +.++.++.++. +|++++|+|
T Consensus 1 ~~DlH~Ht~~S~DG~~~~ee~v~~A~~~Gl~~iaiTDH~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~i~i~~G~E 80 (267)
T 2yxo_A 1 MVDSHVHTPLCGHAEGHPEAYLEEARAKGLKGVVFTDHSPMPPWYDPESRMRLEALPFYLLALERVRERAQDLYVGIGLE 80 (267)
T ss_dssp CEEEEECCGGGSSCCSCHHHHHHHHHHTTCSEEEEEEECCCCTTSSGGGSCCGGGHHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred CCccCcCcCCCCCCCCCHHHHHHHHHHcCCCEEEEcCCCCCCcccCccccccHHHHHHHHHHHHHHHHHhcCCcEEEEEE
Confidence 47999999999 999999999999999999999999999987 3 34445555554 999999999
Q ss_pred EEeeeccCCCCCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCCCCCChH
Q 018376 136 ISTIFCQRGSESEEPVHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKWEHVAKIAGKGVAPGRL 215 (357)
Q Consensus 136 is~~~~~~~~~~g~~vHiLgy~~d~~~~~~~~l~~~l~~i~~~R~~r~~~~i~~L~~~g~~i~~e~v~~~a~~~~~~~~~ 215 (357)
+++.. +. .+.+.+ .|...++.. .+++.
T Consensus 81 i~~~~-------~~---------------~~~~~~------------------~l~~~~~d~-------------vi~s~ 107 (267)
T 2yxo_A 81 ADFHP-------GT---------------EGFLAQ------------------LLRRYPFDY-------------VIGSV 107 (267)
T ss_dssp EECCT-------TC---------------HHHHHH------------------HHHSSCCSC-------------EEEEC
T ss_pred eccCC-------Cc---------------HHHHHH------------------HHHhCCCCE-------------EEEee
Confidence 99753 10 111111 111111110 12222
Q ss_pred HHHHHHHHcCccc----------cHHHHHHHHhhCCCCcccCCCCCCHHHHHHHHHHcCCeEEeeCCCCCC---C-----
Q 018376 216 HVARAMVEAGHVE----------NLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALK---N----- 277 (357)
Q Consensus 216 hia~aLv~~g~~~----------~~~~~f~~yl~~~~~~yv~~~~~~~eevI~~I~~aGGvaVLAHP~~~~---~----- 277 (357)
|++.. .++.. +..+.+..| .++++++|+. ||++|+|||.+++ .
T Consensus 108 H~~~~---~~~~~~~~~~~~~~~~~~~~~~~y---------------~~~~~~~i~~-g~~~vlaHp~~~~~~~~~~~~~ 168 (267)
T 2yxo_A 108 HYLGA---WPLDHPDHQEEYAWRDLKEVFRAY---------------FQEVEKAARS-GLFHAIGHLDLPKKFGHRLPEE 168 (267)
T ss_dssp CCBTT---BCTTCGGGGGGGGGSCHHHHHHHH---------------HHHHHHHHTS-SCCSEESCTTGGGTTSCCCCHH
T ss_pred EecCC---cCCCcHHHHHHHhcCCHHHHHHHH---------------HHHHHHHHhc-CCCCEEeCccHHHHhCCCCChH
Confidence 22211 01110 111222222 3678899985 9999999998732 1
Q ss_pred -----hHHHHHHHHHcCCcEEEeecCCCcH------HHHHHHHHHHhcCCceeecccccCCCCC
Q 018376 278 -----PAAIIRKLKDVGLHGLEVYRSDGKL------VDVNFLEKIDNFLLLLCLRQISNCDCAL 330 (357)
Q Consensus 278 -----~~~li~~l~~~GlDGIEv~~~~~~~------~~~~~~~lA~~~~Ll~t~~~~~GSD~h~ 330 (357)
...+++.+++.| .+|||.++.... ....+.++|.++|+..+. |||+|.
T Consensus 169 ~~~~~~~~~l~~~~~~g-~~iEvn~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----gSDaH~ 227 (267)
T 2yxo_A 169 ALLELAEPALRAVAEAG-LFLDVNTAGLRRPAKEVYPAPALLRRARELGIGLVL----GSDAHR 227 (267)
T ss_dssp HHHHHHHHHHHHHHHHT-CEEEEEGGGGGSTTCSCBSCHHHHHHHHHHTCCEEE----ECCBSS
T ss_pred HHHHHHHHHHHHHHHcC-CEEEEEchHhcCCCCCCCCCHHHHHHHHHcCCCEEE----ecCCCC
Confidence 135677888899 699998764321 124689999999999986 999993
No 5
>1m65_A Hypothetical protein YCDX; structural genomics, beta-alpha-barrel, metallo-enzyme, STRU function project, S2F, unknown function; 1.57A {Escherichia coli} SCOP: c.6.3.1 PDB: 1m68_A 1pb0_A
Probab=99.89 E-value=9.8e-23 Score=187.99 Aligned_cols=174 Identities=20% Similarity=0.252 Sum_probs=117.1
Q ss_pred ceEEceeeeCcCCC-CCCCHHHHHHHHHHcCCcEEEEecCCC-CCCHHH--HH---HHH--HhcCCeEEEEEEEEeeecc
Q 018376 72 NVVFELHSHSNFSD-GYLSPSKLVERAHCNGVKVLALTDHDT-MSGIPE--AI---ETA--RRFGMKIIPGVEISTIFCQ 142 (357)
Q Consensus 72 ~~~~DLH~HT~~SD-G~~tp~elv~~A~~~Gl~~iaITDHdt-~~g~~~--~~---~~a--~~~gi~vi~GiEis~~~~~ 142 (357)
++++||||||.+|| |..+|++++++|++.|++.||||||++ +.+... .. +.+ +..+|.+++|+|+++...
T Consensus 1 m~~~DlH~Ht~~Sd~g~~~~~e~v~~A~~~Gl~~iaiTDH~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~G~Ei~~~~~- 79 (245)
T 1m65_A 1 MYPVDLHMHTVASTHAYSTLSDYIAQAKQKGIKLFAITDHGPDMEDAPHHWHFINMRIWPRVVDGVGILRGIEANIKNV- 79 (245)
T ss_dssp -CCEECCBCCTTSTTCCCCHHHHHHHHHHHTCCEEEEEEECTTSTTCCCTHHHHGGGGSCSEETTEEEEEEEEEEBCST-
T ss_pred CCceEeCcCCCCCCCCCCcHHHHHHHHHHCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHhcCCCeEEEEEEeeeeCC-
Confidence 46899999999995 677999999999999999999999998 665421 11 111 225899999999998531
Q ss_pred CCCCCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCCCCCChHHHHHHHH
Q 018376 143 RGSESEEPVHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKWEHVAKIAGKGVAPGRLHVARAMV 222 (357)
Q Consensus 143 ~~~~~g~~vHiLgy~~d~~~~~~~~l~~~l~~i~~~R~~r~~~~i~~L~~~g~~i~~e~v~~~a~~~~~~~~~hia~aLv 222 (357)
.+ . .+. ...+ ++.+ .+ .++..
T Consensus 80 ----~~-~-------~~~----~~~~------------------~~~l---d~---------------vi~~~------- 100 (245)
T 1m65_A 80 ----DG-E-------IDC----SGKM------------------FDSL---DL---------------IIAGF------- 100 (245)
T ss_dssp ----TC-C-------BSC----CHHH------------------HHHC---SE---------------EEEEC-------
T ss_pred ----CC-c-------hhH----HHHH------------------HhhC---CE---------------EEEee-------
Confidence 11 1 110 1111 1100 00 00000
Q ss_pred HcCccccHHHHHHHHhhCCCCcccCCCC-CCHHHHHHHHHHcCCeEEeeCCCCCCC---hHHHHHHHHHcCCcEEEeecC
Q 018376 223 EAGHVENLKQAFARYLYDGGPAYSTGSE-PLAEVAVQLIHRTGGLAVLAHPWALKN---PAAIIRKLKDVGLHGLEVYRS 298 (357)
Q Consensus 223 ~~g~~~~~~~~f~~yl~~~~~~yv~~~~-~~~eevI~~I~~aGGvaVLAHP~~~~~---~~~li~~l~~~GlDGIEv~~~ 298 (357)
..++|.+... ..+++++++++ +||++|+|||+++.. ..++++.+++.| ++||++++
T Consensus 101 ------------------h~~~~~~~~~~~~~~~~~~~i~-~g~~~vlaHp~~~~~~~~~~~~~~~~~~~g-~~iEvn~~ 160 (245)
T 1m65_A 101 ------------------HEPVFAPHDKATNTQAMIATIA-SGNVHIISHPGNPKYEIDVKAVAEAAAKHQ-VALEINNS 160 (245)
T ss_dssp ------------------CTTTSCCCCHHHHHHHHHHHHH-TSCCSEECCTTCTTSCCCHHHHHHHHHHHT-CEEEEETT
T ss_pred ------------------cCCccCcchHHHHHHHHHHHHh-CCCCCEEECCCCccchhHHHHHHHHHHHcC-CEEEEECC
Confidence 0111222211 34578899998 999999999987542 356788899999 79999997
Q ss_pred CCc-------HHHHHHHHHHHhcCCceeecccccCCCC
Q 018376 299 DGK-------LVDVNFLEKIDNFLLLLCLRQISNCDCA 329 (357)
Q Consensus 299 ~~~-------~~~~~~~~lA~~~~Ll~t~~~~~GSD~h 329 (357)
... .....+.++|.++|+..+. |||+|
T Consensus 161 ~~~~~~~g~~~~~~~~~~~~~~~g~~~~~----gSDaH 194 (245)
T 1m65_A 161 SFLHSRKGSEDNCREVAAAVRDAGGWVAL----GSDSH 194 (245)
T ss_dssp C----------CHHHHHHHHHHHTCCEEE----ECCBS
T ss_pred CCcccCCCCCCchHHHHHHHHHcCCEEEE----ECCCC
Confidence 652 1224688999999999886 99999
No 6
>2anu_A Hypothetical protein TM0559; predicted metal-dependent phosphoesterase (PHP famil structural genomics, joint center for structural genomics; 2.40A {Thermotoga maritima} SCOP: c.6.3.1
Probab=99.88 E-value=1.2e-22 Score=190.02 Aligned_cols=159 Identities=24% Similarity=0.356 Sum_probs=116.2
Q ss_pred cCCCCceEEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCC----CCCC---------------HHH--------H
Q 018376 67 RAVDNNVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHD----TMSG---------------IPE--------A 119 (357)
Q Consensus 67 ~~~~~~~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~iaITDHd----t~~g---------------~~~--------~ 119 (357)
.+...|+++|||+||.+|||..+|++++++|++.|++.||||||+ ++.| +.+ +
T Consensus 14 ~~~~~~~~~DlH~Ht~~SDg~~t~ee~v~~A~~~Gl~~i~iTDH~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~ 93 (255)
T 2anu_A 14 KTDTEWLLCDFHVHTNMSDGHLPLGEVVDLFGKHGVDVVSITDHIVDRRTLEQRKRNGEPLGAITEDKFQDYLKRLWREQ 93 (255)
T ss_dssp ---CEEEEEEEEECCTTTTCSSCHHHHHHHHHHTTCSEEEEEEEEECHHHHHHHHHTTCCCCSCCSTTHHHHHHHHHHHH
T ss_pred CCCCceEEEEEeecCCCcCCCCCHHHHHHHHHHCCCCEEEEcCCCCcccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 344678999999999999999999999999999999999999997 2322 111 2
Q ss_pred HHHHHhcCCeEEEEEEEEeeeccCCCCCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCCCCH
Q 018376 120 IETARRFGMKIIPGVEISTIFCQRGSESEEPVHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKW 199 (357)
Q Consensus 120 ~~~a~~~gi~vi~GiEis~~~~~~~~~~g~~vHiLgy~~d~~~~~~~~l~~~l~~i~~~R~~r~~~~i~~L~~~g~~i~~ 199 (357)
.++++..++.+++|+|+++. +..+|+|+++.+. +
T Consensus 94 ~~~~~~~~i~v~~G~Ei~~~--------~~~~h~l~~~~~~----~---------------------------------- 127 (255)
T 2anu_A 94 KRAWEEYGMILIPGVEITNN--------TDLYHIVAVDVKE----Y---------------------------------- 127 (255)
T ss_dssp HHHHHHHSCEEEEEEEEEET--------TTTEEEEEESCCS----C----------------------------------
T ss_pred HhhccccCcEEEEEEEEeeC--------CCCeeEEEecccc----c----------------------------------
Confidence 22334569999999999974 3569999997421 0
Q ss_pred HHHHHHhCCCCCCChHHHHHHHHHcCccccHHHHHHHHhhCCCCcccCCCCCCHHHHHHHHHHcCCeEEeeCCCCCCChH
Q 018376 200 EHVAKIAGKGVAPGRLHVARAMVEAGHVENLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKNPA 279 (357)
Q Consensus 200 e~v~~~a~~~~~~~~~hia~aLv~~g~~~~~~~~f~~yl~~~~~~yv~~~~~~~eevI~~I~~aGGvaVLAHP~~~~~~~ 279 (357)
++ ....++++++.++..|+++|+|||+++....
T Consensus 128 ----------------------------------------------~~-~~~~~~~~l~~i~~~g~~~ilaHp~~~~~~~ 160 (255)
T 2anu_A 128 ----------------------------------------------VD-PSLPVEEIVEKLKEQNALVIAAHPDRKKQDE 160 (255)
T ss_dssp ----------------------------------------------CC-TTSCHHHHHHHHHHTTCEEEECCCCTTC---
T ss_pred ----------------------------------------------cC-CCCCHHHHHHHHHHCCCeEEEeCCCcccccc
Confidence 00 0135789999999999999999999764321
Q ss_pred H-----HH---HHHHHcCCcEEEeecCCCcHHHHHHHHHHHhcCCceeecccccCCCC
Q 018376 280 A-----II---RKLKDVGLHGLEVYRSDGKLVDVNFLEKIDNFLLLLCLRQISNCDCA 329 (357)
Q Consensus 280 ~-----li---~~l~~~GlDGIEv~~~~~~~~~~~~~~lA~~~~Ll~t~~~~~GSD~h 329 (357)
. .. +.+ ...+++||++++.. +..+|+++|+..+. |||+|
T Consensus 161 ~~~~~~~~~~~~~~-~~~~~aiEin~~~~------~~~~~~~~g~~~~~----gSDAH 207 (255)
T 2anu_A 161 EHLSWYLWANMERF-KDTFDAWEIANRDD------LFNSVGVKKYRYVA----NSDFH 207 (255)
T ss_dssp --CCCHHHHSTTTT-TTTCSEEEEEETTE------ECHHHHHTTCCEEE----ECCBC
T ss_pred ccccccccchhhhh-hccCcEEEEcCCCc------hhhHHHHcCCceEe----ccCCC
Confidence 0 11 122 23579999999763 22468899999886 99999
No 7
>2hnh_A DNA polymerase III alpha subunit; DNA replication, nucleotidyltransferase, beta, PHP, transferase; HET: DNA; 2.30A {Escherichia coli} PDB: 2hqa_A*
Probab=99.75 E-value=9e-18 Score=181.63 Aligned_cols=84 Identities=25% Similarity=0.387 Sum_probs=75.1
Q ss_pred eEEceeeeCcCC--CCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcCCeEEEEEEEEeeeccCCCCCCCc
Q 018376 73 VVFELHSHSNFS--DGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVEISTIFCQRGSESEEP 150 (357)
Q Consensus 73 ~~~DLH~HT~~S--DG~~tp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vi~GiEis~~~~~~~~~~g~~ 150 (357)
.++||||||.|| ||..+|++++++|++.|++++|||||+++.|+.++.+.|++.||++|+|+|+++.+... ....
T Consensus 5 ~~vdLH~HT~~S~lDG~~~~~elv~~A~~~Gl~alAITDH~~~~G~~~~~~~~~~~gIk~I~G~Ei~~~~~~~---~~~~ 81 (910)
T 2hnh_A 5 RFVHLRVHSDYSMIDGLAKTAPLVKKAAALGMPALAITDFTNLCGLVKFYGAGHGAGIKPIVGADFNVQCDLL---GDEL 81 (910)
T ss_dssp CCCCCCBCCGGGSSSCCSCHHHHHHHHHHTTCSEEEECCBTCCTTHHHHHHHHHHHTCEEEEEEEEEEECTTT---TTCC
T ss_pred ceeeecccccCchhcccCCHHHHHHHHHHCCCCEEEEEeCCcchhHHHHHHHHHHCCCeEEEEEEEEEecCCC---Cccc
Confidence 479999999999 99999999999999999999999999999999999999999999999999999976210 0135
Q ss_pred EEEEEEecc
Q 018376 151 VHILAYYSS 159 (357)
Q Consensus 151 vHiLgy~~d 159 (357)
+|+++|..+
T Consensus 82 ~hlv~la~n 90 (910)
T 2hnh_A 82 THLTVLAAN 90 (910)
T ss_dssp EEEEEEECS
T ss_pred ceEEEEEcC
Confidence 899999864
No 8
>2w9m_A Polymerase X; SAXS, DNA repair, DNA polymerase, DNA replication; 2.46A {Deinococcus radiodurans}
Probab=99.73 E-value=1.3e-17 Score=173.29 Aligned_cols=173 Identities=19% Similarity=0.235 Sum_probs=115.1
Q ss_pred CCCceEEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCH------HHH-------HHHHHhcCCeEEEEEE
Q 018376 69 VDNNVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGI------PEA-------IETARRFGMKIIPGVE 135 (357)
Q Consensus 69 ~~~~~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~iaITDHdt~~g~------~~~-------~~~a~~~gi~vi~GiE 135 (357)
...++++||||||.||||..+|++++++|++.|++.||||||++..++ ..+ .++.++ +|++++|+|
T Consensus 323 ~~~~~~~DlH~HT~~SDG~~t~eemv~~A~~~Gl~~IaiTDH~~~~~~~~~~~~~~~~~~~~~i~~l~~~-gi~il~GiE 401 (578)
T 2w9m_A 323 TVGDLRGMIHTHSTWSDGGASIREMAEATLTLGHEFLGTADHSRAAYYANGLTIERLREQLKEIRELQRA-GLPIVAGSE 401 (578)
T ss_dssp CGGGCCEEEEECCTTTTCSSCHHHHHHHHHHTTCSEEEECEEBTTCGGGTCBCHHHHHHHHHHHHHHHHT-TCCEECEEE
T ss_pred chhhhceEEEecCCccCCCCCHHHHHHHHHHCCCeEEEEcCCCCccccccCCCHHHHHHHHHHHHHHHhc-CCeEEEeee
Confidence 346789999999999999999999999999999999999999988644 222 223334 999999999
Q ss_pred EEeeeccCCCCCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCCCCCChH
Q 018376 136 ISTIFCQRGSESEEPVHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKWEHVAKIAGKGVAPGRL 215 (357)
Q Consensus 136 is~~~~~~~~~~g~~vHiLgy~~d~~~~~~~~l~~~l~~i~~~R~~r~~~~i~~L~~~g~~i~~e~v~~~a~~~~~~~~~ 215 (357)
+++.. .|. .+. ...+ +....+ .++..
T Consensus 402 v~i~~------~G~--------ld~----~~~~---------------------l~~~D~---------------vI~sv 427 (578)
T 2w9m_A 402 VDILD------DGS--------LDF----PDDV---------------------LGELDY---------------VVVSV 427 (578)
T ss_dssp EEBCT------TSC--------BSS----CHHH---------------------HTTSSE---------------EEEEC
T ss_pred ecccC------Ccc--------hhh----HHHH---------------------HhcCCE---------------EEEEe
Confidence 99853 111 110 1110 000000 01111
Q ss_pred HHHHHHHHcCccccHHHHHHHHhhCCCCcccCCCCCCHHHHHHHHHHcCCeEEeeCCCCC---------CChHHHHHHHH
Q 018376 216 HVARAMVEAGHVENLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWAL---------KNPAAIIRKLK 286 (357)
Q Consensus 216 hia~aLv~~g~~~~~~~~f~~yl~~~~~~yv~~~~~~~eevI~~I~~aGGvaVLAHP~~~---------~~~~~li~~l~ 286 (357)
|.. +..+. ....++++++++ .|+++|+|||... ...+.++..++
T Consensus 428 H~~-------~~~~~-------------------~~~~~~~~~ai~-~g~v~IlaHP~~~~~~~~~~~~~~~~~il~~~~ 480 (578)
T 2w9m_A 428 HSN-------FTLDA-------------------ARQTERLIRAVS-HPLVTVLGHATGRLLLRRPGYALDLDAVLGACE 480 (578)
T ss_dssp CSC-------TTSCH-------------------HHHHHHHHHHHT-CSSCCEECSTTCCBTTTBCCCCCCHHHHHHHHH
T ss_pred ccC-------CCCCH-------------------HHHHHHHHHHHh-cCCCeEEECcchhhcCCCcCchhhHHHHHHHHH
Confidence 100 00000 001255677775 5999999999842 12356888888
Q ss_pred HcCCcEEEeecCCCcH-HHHHHHHHHHhcCCceeecccccCCCC
Q 018376 287 DVGLHGLEVYRSDGKL-VDVNFLEKIDNFLLLLCLRQISNCDCA 329 (357)
Q Consensus 287 ~~GlDGIEv~~~~~~~-~~~~~~~lA~~~~Ll~t~~~~~GSD~h 329 (357)
+.| .+||+.++.... ....+.++|.+ |+..+. |||+|
T Consensus 481 e~g-~~lEIN~~~~r~~~~~~~~~~a~e-Gl~i~i----gSDAH 518 (578)
T 2w9m_A 481 ANG-TVVEINANAARLDLDWREALRWRE-RLKFAI----NTDAH 518 (578)
T ss_dssp HHT-CEEEEECSTTTCBSCHHHHHHHTT-TCCEEE----ECCCS
T ss_pred HCC-CEEEEECCCCCcCcHHHHHHHHHc-CCEEEE----ECCCC
Confidence 888 699998875421 12358899999 999986 99999
No 9
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=99.72 E-value=2e-17 Score=153.72 Aligned_cols=172 Identities=23% Similarity=0.180 Sum_probs=114.2
Q ss_pred eEEceeeeCcCC--CCCCCHH---HHHHHHHHcCCcEEEEecCCCCC----CHH-------HHHHHHHh--cCCeEEEEE
Q 018376 73 VVFELHSHSNFS--DGYLSPS---KLVERAHCNGVKVLALTDHDTMS----GIP-------EAIETARR--FGMKIIPGV 134 (357)
Q Consensus 73 ~~~DLH~HT~~S--DG~~tp~---elv~~A~~~Gl~~iaITDHdt~~----g~~-------~~~~~a~~--~gi~vi~Gi 134 (357)
.++|+||||.+| ||..+++ +++++|.+.|++.|++|||.... .+. ++.+..++ .+|.+++|+
T Consensus 4 ~m~D~H~Ht~~~~ddg~~~~e~~~e~i~~A~~~Gi~~i~~TdH~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~i~~G~ 83 (247)
T 2wje_A 4 GMIDIHSHIVFDVDDGPKSREESKALLAESYRQGVRTIVSTSHRRKGMFETPEEKIAENFLQVREIAKEVASDLVIAYGA 83 (247)
T ss_dssp CEEECCBCCSTTSSSSCSSHHHHHHHHHHHHHTTEEEEECCCEEBTTTBCCCHHHHHHHHHHHHHHHHHHCTTCEEECCC
T ss_pred CCEEEecccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCcEEEEee
Confidence 369999999988 9999998 69999999999999999996532 111 22222222 479999999
Q ss_pred EEEeeeccCCCCCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCCCCCCh
Q 018376 135 EISTIFCQRGSESEEPVHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKWEHVAKIAGKGVAPGR 214 (357)
Q Consensus 135 Eis~~~~~~~~~~g~~vHiLgy~~d~~~~~~~~l~~~l~~i~~~R~~r~~~~i~~L~~~g~~i~~e~v~~~a~~~~~~~~ 214 (357)
|+.... .+.+ .+.+ +.-.++ . +.
T Consensus 84 E~~~~~--------------------------~~~~------------------~l~~-~~~~~l------~------gs 106 (247)
T 2wje_A 84 EIYYTP--------------------------DVLD------------------KLEK-KRIPTL------N------DS 106 (247)
T ss_dssp EEECCT--------------------------HHHH------------------HHHT-TCSCCG------G------GS
T ss_pred EEeecH--------------------------HHHH------------------HHhc-CCccEE------C------CC
Confidence 998631 0000 0100 000000 0 00
Q ss_pred HHHHHHHHHcCccccHHHHHHHHhhCCCCcccCC-CCCCHHHHHHHHHHcCCeEEeeCCCCCCC---hHHHHHHHHHcCC
Q 018376 215 LHVARAMVEAGHVENLKQAFARYLYDGGPAYSTG-SEPLAEVAVQLIHRTGGLAVLAHPWALKN---PAAIIRKLKDVGL 290 (357)
Q Consensus 215 ~hia~aLv~~g~~~~~~~~f~~yl~~~~~~yv~~-~~~~~eevI~~I~~aGGvaVLAHP~~~~~---~~~li~~l~~~Gl 290 (357)
+|+..+ +.+. ......+++..++++|+++|||||.++.. ..+++..+++.|+
T Consensus 107 ---------------------~~vl~e---~~~~~~~~~~~~~i~~i~~~g~~~vlaHp~r~~~~~~~~~~l~~l~~~G~ 162 (247)
T 2wje_A 107 ---------------------RYALIE---FSMNTPYRDIHSALSKILMLGITPVIAHIERYDALENNEKRVRELIDMGC 162 (247)
T ss_dssp ---------------------SEEEEE---CCTTCCHHHHHHHHHHHHTTTCEEEETTGGGCGGGTTCHHHHHHHHHTTC
T ss_pred ---------------------eEEEEe---CCCCcchHHHHHHHHHHHHCCCcEEEEehhhHHHHhhCHHHHHHHHHCCC
Confidence 010000 0000 11235789999999999999999998642 3578999999998
Q ss_pred cEEEeecCCC--c-------HHHHHHHHHHHhcCCceeecccccCCCCC
Q 018376 291 HGLEVYRSDG--K-------LVDVNFLEKIDNFLLLLCLRQISNCDCAL 330 (357)
Q Consensus 291 DGIEv~~~~~--~-------~~~~~~~~lA~~~~Ll~t~~~~~GSD~h~ 330 (357)
. +|++++.. . .....+..+|.++|+..|. |||+|.
T Consensus 163 ~-lEiN~~s~~~~~~~g~~~~~~~~~~~~~~~~gl~~~~----GSDaH~ 206 (247)
T 2wje_A 163 Y-TQVNSSHVLKPKLFGERYKFMKKRAQYFLEQDLVHVI----ASDMHN 206 (247)
T ss_dssp E-EEEEHHHHSCCCSSCCSCHHHHHHHHHHHHTTCCSEE----ECCBCC
T ss_pred E-EEEecHhhHhcCCCCCcChHHHHHHHHHHHCCCeEEE----EeCCCC
Confidence 7 99987543 2 2334688889999999986 999994
No 10
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=99.71 E-value=2.1e-17 Score=155.78 Aligned_cols=172 Identities=17% Similarity=0.215 Sum_probs=114.8
Q ss_pred EEceeeeCcC--CCCCCCHHH---HHHHHHHcCCcEEEEecCCCCCC-----------HHHHHHHHHh--cCCeEEEEEE
Q 018376 74 VFELHSHSNF--SDGYLSPSK---LVERAHCNGVKVLALTDHDTMSG-----------IPEAIETARR--FGMKIIPGVE 135 (357)
Q Consensus 74 ~~DLH~HT~~--SDG~~tp~e---lv~~A~~~Gl~~iaITDHdt~~g-----------~~~~~~~a~~--~gi~vi~GiE 135 (357)
++|+||||.+ |||..|+++ ++++|.+.|++.|++|||..... +.++.+..++ .+|++++|+|
T Consensus 1 m~D~H~H~~~~~ddG~~~~~~sl~~~~~a~~~G~~~i~~T~H~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~i~I~~G~E 80 (262)
T 3qy7_A 1 MIDIHCHILPAMDDGAGDSADSIEMARAAVRQGIRTIIATPHHNNGVYKNEPAAVREAADQLNKRLIKEDIPLHVLPGQE 80 (262)
T ss_dssp CEESSBCCSTTSSSSCSSHHHHHHHHHHHHHTTCCEEECCCBSEETTEECCHHHHHHHHHHHHHHHHHTTCCCEEECCCE
T ss_pred CEEEeecCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCEEecCeE
Confidence 4799999998 599999997 99999999999999999974321 2233343333 4789999999
Q ss_pred EEeeeccCCCCCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCCCCCChH
Q 018376 136 ISTIFCQRGSESEEPVHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKWEHVAKIAGKGVAPGRL 215 (357)
Q Consensus 136 is~~~~~~~~~~g~~vHiLgy~~d~~~~~~~~l~~~l~~i~~~R~~r~~~~i~~L~~~g~~i~~e~v~~~a~~~~~~~~~ 215 (357)
+.... +... .+.+ +--.++. +
T Consensus 81 v~~~~-----------------------~~~~---------------------~l~~-~~~~~l~------~-------- 101 (262)
T 3qy7_A 81 IRIYG-----------------------EVEQ---------------------DLAK-RQLLSLN------D-------- 101 (262)
T ss_dssp EECCT-----------------------THHH---------------------HHHT-TCSCCGG------G--------
T ss_pred Eecch-----------------------hHHH---------------------HHhc-CCCcEEC------C--------
Confidence 98642 0100 0100 0000000 0
Q ss_pred HHHHHHHHcCccccHHHHHHHHhhCCCCcccCCCCCCHHHHHHHHHHcCCeEEeeCCCCCCC---hHHHHHHHHHcCCcE
Q 018376 216 HVARAMVEAGHVENLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKN---PAAIIRKLKDVGLHG 292 (357)
Q Consensus 216 hia~aLv~~g~~~~~~~~f~~yl~~~~~~yv~~~~~~~eevI~~I~~aGGvaVLAHP~~~~~---~~~li~~l~~~GlDG 292 (357)
.+|+-..-+. ......+.++|..|.++|+++|||||.|+.. ..+++.++++.| -+
T Consensus 102 -------------------~~~vl~e~~~--~~~~~~~~~~l~~i~~~g~v~ILAHPeRy~~~~~~~~~l~~l~~~G-~~ 159 (262)
T 3qy7_A 102 -------------------TKYILIEFPF--DHVPRYAEQLFYDLQLKGYIPVIAHPERNREIRENPSLLYHLVEKG-AA 159 (262)
T ss_dssp -------------------SSEEEEECCT--TCCCTTHHHHHHHHHHTTCEEEEECGGGCHHHHHCTHHHHHHHHTT-CE
T ss_pred -------------------ceEEEEeCCC--ccCHHHHHHHHHHHHHCCCcEEEECCCccccccccHHHHHHHHHCC-CE
Confidence 0011000000 0112357899999999999999999998742 135788999999 58
Q ss_pred EEeecCCCc----HHHHHHHHHHHhcCCceeecccccCCCCC
Q 018376 293 LEVYRSDGK----LVDVNFLEKIDNFLLLLCLRQISNCDCAL 330 (357)
Q Consensus 293 IEv~~~~~~----~~~~~~~~lA~~~~Ll~t~~~~~GSD~h~ 330 (357)
+|+..+... .....+...|.++|++.+. |||+|.
T Consensus 160 iEiN~~s~~g~~g~~~~~~~~~~~~~gl~~~i----gSDaH~ 197 (262)
T 3qy7_A 160 SQITSGSLAGIFGKQLKAFSLRLVEANLIHFV----ASDAHN 197 (262)
T ss_dssp EEEEHHHHHTTTCHHHHHHHHHHHHTTCCCEE----ECCBCS
T ss_pred EEEECCccCcccchHHHHHHHHHHhCCCeEEE----EccCCC
Confidence 999875321 2234678888999999986 999994
No 11
>2hpi_A DNA polymerase III alpha subunit; POL-beta-like nucleotidyltransferase fold, transferase; HET: DNA; 3.00A {Thermus aquaticus} PDB: 2hpm_A* 3e0d_A*
Probab=99.67 E-value=5.4e-16 Score=170.87 Aligned_cols=99 Identities=25% Similarity=0.297 Sum_probs=80.0
Q ss_pred ceEEceeeeCcCC--CCCCCHHHHHHHHHH--cCCcEEEEecCCCCCCHHHHHHHHHhcCCeEEEEEEEEeeeccC-CCC
Q 018376 72 NVVFELHSHSNFS--DGYLSPSKLVERAHC--NGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVEISTIFCQR-GSE 146 (357)
Q Consensus 72 ~~~~DLH~HT~~S--DG~~tp~elv~~A~~--~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vi~GiEis~~~~~~-~~~ 146 (357)
..++|||+||.|| ||..+|++++++|++ .|++++|||||+++.|+.++.+.|++.||++|+|+|+++..... +..
T Consensus 5 ~~fvdLH~HT~~SlLDG~~~~~elv~~A~~~~~G~~alAITDH~~~~G~~~f~~~a~~~gIk~I~G~E~~~~~~~~~d~~ 84 (1220)
T 2hpi_A 5 LKFAHLHQHTQFSLLDGAAKLQDLLKWVKETTPEDPALAMTDHGNLFGAVEFYKKATAMGVKPIIGYEAYVAAESRFDRK 84 (1220)
T ss_dssp CCCCCCSBCCTTSTTTCCCCHHHHHHHHHHHCCSSCEEEEEEETCCTTHHHHHHHHHTTTCEEEEEEEEEEESSCTTCCC
T ss_pred CcEeEcccccCCCcccccCCHHHHHHHHHhccCCCCEEEEEecCcchhHHHHHHHHHHcCCeEEEEEEEEEecccccccc
Confidence 3589999999999 999999999999999 99999999999999999999999999999999999999975211 000
Q ss_pred C----CC-cEEEEEEeccCCCCchHHHHHHH
Q 018376 147 S----EE-PVHILAYYSSCGPSKYEELENFL 172 (357)
Q Consensus 147 ~----g~-~vHiLgy~~d~~~~~~~~l~~~l 172 (357)
. .. ..|++.+..+ ..+|.+|.+++
T Consensus 85 ~~~~~d~~~~hLvlLAkN--~~GY~NL~kLi 113 (1220)
T 2hpi_A 85 RGKGLDGGYFHLTLLAKD--FTGYQNLVRLA 113 (1220)
T ss_dssp CC-----CEEEEEEEECS--HHHHHHHHHHH
T ss_pred ccccccCccceEEEEEcC--HHHHHHHHHHH
Confidence 0 11 3799999753 23566655544
No 12
>3b0x_A DNA polymerase beta family (X family); structural genomics, riken structural genomics/proteomics in RSGI, polxc, PHP, DRP lyase; HET: DNA DGT; 1.36A {Thermus thermophilus} PDB: 3au2_A* 3au6_A* 3auo_A* 3b0y_A*
Probab=99.67 E-value=5.3e-16 Score=160.96 Aligned_cols=172 Identities=22% Similarity=0.246 Sum_probs=111.5
Q ss_pred ceEEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHH-------------HHHHHHHh-cCCeEEEEEEEE
Q 018376 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIP-------------EAIETARR-FGMKIIPGVEIS 137 (357)
Q Consensus 72 ~~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~iaITDHdt~~g~~-------------~~~~~a~~-~gi~vi~GiEis 137 (357)
.+++||||||.||||..++++++++|++.|++.+|||||+...++. ++.++.++ .++++++|+|++
T Consensus 336 ~~~~DlH~HT~~SDG~~t~ee~v~~A~~~G~~~iaiTDH~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~i~i~~G~Ei~ 415 (575)
T 3b0x_A 336 QVKGDLQVHSTYSDGQNTLEELWEAAKTMGYRYLAVTDHSPAVRVAGGPSPEEALKRVGEIRRFNETHGPPYLLAGAEVD 415 (575)
T ss_dssp GCCEEEEECCTTTTCSCCHHHHHHHHHHTTCSEEEEEEECTTTTTSSCSCHHHHHHHHHHHHHHHHHHCSSEEEEEEEEE
T ss_pred hcCeeEeecCCccCCCCCHHHHHHHHHHCCCCEEEEcCCCCccccccCCCHHHHHHHHHHHHHHHHhcCCCeEEEEEeec
Confidence 5799999999999999999999999999999999999999876531 22233334 489999999999
Q ss_pred eeeccCCCCCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCCCCCChHHH
Q 018376 138 TIFCQRGSESEEPVHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKWEHVAKIAGKGVAPGRLHV 217 (357)
Q Consensus 138 ~~~~~~~~~~g~~vHiLgy~~d~~~~~~~~l~~~l~~i~~~R~~r~~~~i~~L~~~g~~i~~e~v~~~a~~~~~~~~~hi 217 (357)
+.. .+. + +. ...+ +....+ .++..|.
T Consensus 416 ~~~------dg~-l-------~~----~~~~---------------------l~~~d~---------------vL~svH~ 441 (575)
T 3b0x_A 416 IHP------DGT-L-------DY----PDWV---------------------LRELDL---------------VLVSVHS 441 (575)
T ss_dssp BCT------TSC-B-------SS----CHHH---------------------HTTCSE---------------EEEECCS
T ss_pred ccC------CCC-c-------hh----HHHH---------------------HhhCCE---------------EEEEeee
Confidence 753 111 0 00 0110 000000 0000000
Q ss_pred HHHHHHcCccccHHHHHHHHhhCCCCcccCCCCCCHHHHHHHHHHcCCeEEeeCCCC-C-----C---ChHHHHHHHHHc
Q 018376 218 ARAMVEAGHVENLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWA-L-----K---NPAAIIRKLKDV 288 (357)
Q Consensus 218 a~aLv~~g~~~~~~~~f~~yl~~~~~~yv~~~~~~~eevI~~I~~aGGvaVLAHP~~-~-----~---~~~~li~~l~~~ 288 (357)
. + ...+ ....++++++++ .|+++|+|||.. + . ..++++..+++.
T Consensus 442 ~-------------------~-~~~~------~~~~~~l~~~i~-~g~v~IlaHp~~r~~~~r~~~~~~~~~il~~~~~~ 494 (575)
T 3b0x_A 442 R-------------------F-NLPK------ADQTKRLLKALE-NPFVHVLAHPTARLLGRRAPIEADWEAVFQKAKEK 494 (575)
T ss_dssp C-------------------T-TSCH------HHHHHHHHHHTT-CTTCCEECSTTCCBTTTBCCCCCCHHHHHHHHHHH
T ss_pred C-------------------C-CCCH------HHHHHHHHHHHh-cCCCeEEECCchhhcCCCcCchHHHHHHHHHHHHc
Confidence 0 0 0000 001245666665 899999999972 1 1 235677888888
Q ss_pred CCcEEEeecCCCcH-HHHHHHHHHHhcCCceeecccccCCCC
Q 018376 289 GLHGLEVYRSDGKL-VDVNFLEKIDNFLLLLCLRQISNCDCA 329 (357)
Q Consensus 289 GlDGIEv~~~~~~~-~~~~~~~lA~~~~Ll~t~~~~~GSD~h 329 (357)
| .++|+..+.... ....+.++|.++|+..+. |||+|
T Consensus 495 g-~~lEIN~~~~~~~~~~~~~~~a~e~G~~~vi----gSDAH 531 (575)
T 3b0x_A 495 G-VAVEIDGYYDRMDLPDDLARMAYGMGLWISL----STDAH 531 (575)
T ss_dssp T-CEEEEECCTTTCBSCHHHHHHHHHTTCCEEE----ECCBS
T ss_pred C-CEEEEeCCCCcCCchHHHHHHHHHcCCeEEE----ECCCC
Confidence 8 799997654211 113578999999999875 99999
No 13
>3f2b_A DNA-directed DNA polymerase III alpha chain; DNA polymerase C, DNA polymerase III; HET: DGT; 2.39A {Geobacillus kaustophilus} PDB: 3f2c_A* 3f2d_A*
Probab=99.55 E-value=9.7e-15 Score=158.75 Aligned_cols=104 Identities=28% Similarity=0.400 Sum_probs=85.7
Q ss_pred CceEEceeeeCcCC--CCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcCCeEEEEEEEEeeeccC----C
Q 018376 71 NNVVFELHSHSNFS--DGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVEISTIFCQR----G 144 (357)
Q Consensus 71 ~~~~~DLH~HT~~S--DG~~tp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vi~GiEis~~~~~~----~ 144 (357)
.++++||||||.|| ||..+|++++++|++.|+++||||||+++.|+.++.++|++.||++|+|+|+++.+... .
T Consensus 113 ~~~~vdLH~HT~~S~lDG~~~~~eLv~~A~~~G~~aiAITDH~~~~G~~~~~~~a~~~gIk~I~G~E~~~~~~~~~~~~~ 192 (1041)
T 3f2b_A 113 GEKRVELHLHTPMSQMDAVTSVTKLIEQAKKWGHPAIAVTDHAVVQSFPEAYSAAKKHGMKVIYGLEANIVDDGVPIAYN 192 (1041)
T ss_dssp TSCCCBCCBCCTTSTTTCCSCHHHHHHHHHHTTCSCEEECCBSCCTTHHHHHHHHHHHTCCEEEEEEEEEECC-------
T ss_pred CcceEEcccCCcCccccccCCHHHHHHHHHHCCCCEEEEecccchhhHHHHHHHHHHCCCEEEEEEEEEEEeCCcccccc
Confidence 46899999999999 99999999999999999999999999999999999999999999999999999875211 0
Q ss_pred C------CCCCcEEEEEEeccCCCCchHHHHHHHHHHH
Q 018376 145 S------ESEEPVHILAYYSSCGPSKYEELENFLANIR 176 (357)
Q Consensus 145 ~------~~g~~vHiLgy~~d~~~~~~~~l~~~l~~i~ 176 (357)
. ......|++.+..+ ..+|.+|.++++...
T Consensus 193 ~~~~~~~~~~~~~hlvlLAkN--~~Gy~nL~kLvS~a~ 228 (1041)
T 3f2b_A 193 ETHRRLGSGSGPFHVTLLAQN--ETGLKNLFKLVSLSH 228 (1041)
T ss_dssp -----------CEEEEEEECS--HHHHHHHHHHHHHHH
T ss_pred cccccccccCCCceEEEEeCC--HHHHHHHHHHHHHHH
Confidence 0 01234799888743 467888888877643
No 14
>3dcp_A Histidinol-phosphatase; HISK, histidine biosynthesis, NESG, LMR141, structural genomics, PSI-2, protein structure initiative; 2.10A {Listeria monocytogenes str}
Probab=99.45 E-value=6.4e-13 Score=126.35 Aligned_cols=67 Identities=18% Similarity=0.271 Sum_probs=52.8
Q ss_pred eEEceeeeCcCCC-CC-CCHHHHHHHHHHcCCcEEEEecCCCCCC-H---------------------HH----HHHHHH
Q 018376 73 VVFELHSHSNFSD-GY-LSPSKLVERAHCNGVKVLALTDHDTMSG-I---------------------PE----AIETAR 124 (357)
Q Consensus 73 ~~~DLH~HT~~SD-G~-~tp~elv~~A~~~Gl~~iaITDHdt~~g-~---------------------~~----~~~~a~ 124 (357)
|++|+|+||.+|| |+ .++++++++|+++|++.+|||||....+ + ++ +.++.+
T Consensus 1 m~~D~H~Ht~~s~~~~~~~~~e~~~~A~~~G~~~i~~TdH~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~Y~~~i~~l~~ 80 (283)
T 3dcp_A 1 MKRDGHTHTEFCPHGTHDDVEEMVLKAIELDFDEYSIVEHAPLSSEFMKNTAGDKEAVTTASMAMSDLPYYFKKMNHIKK 80 (283)
T ss_dssp CCEEEEECCTTCTTSCCCCHHHHHHHHHHTTCCEEEEEEECCCCHHHHHTBCSCTHHHHTTSCCGGGHHHHHHHHHHHHH
T ss_pred CCeEEeeCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEecCCCCcchhhhcccccccccccccchHHHHHHHHHHHHHHHH
Confidence 4789999999997 55 7999999999999999999999987642 1 11 222223
Q ss_pred h--cCCeEEEEEEEEee
Q 018376 125 R--FGMKIIPGVEISTI 139 (357)
Q Consensus 125 ~--~gi~vi~GiEis~~ 139 (357)
+ .+|+++.|+|+...
T Consensus 81 ~y~~~I~Il~GiE~d~~ 97 (283)
T 3dcp_A 81 KYASDLLIHIGFEVDYL 97 (283)
T ss_dssp HTTTTCEEEEEEEEECC
T ss_pred HccCCCeEEEEEEeccc
Confidence 3 37999999999874
No 15
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=98.89 E-value=7.8e-09 Score=94.03 Aligned_cols=70 Identities=10% Similarity=0.160 Sum_probs=50.0
Q ss_pred HHHHHHHHHHcCCeEEeeCCCCCCC----hHHHHHHHHHcCCcEEEeecCCC---cH-H-------HHHHHHHHHhcCCc
Q 018376 253 AEVAVQLIHRTGGLAVLAHPWALKN----PAAIIRKLKDVGLHGLEVYRSDG---KL-V-------DVNFLEKIDNFLLL 317 (357)
Q Consensus 253 ~eevI~~I~~aGGvaVLAHP~~~~~----~~~li~~l~~~GlDGIEv~~~~~---~~-~-------~~~~~~lA~~~~Ll 317 (357)
.+..-.++.. .+-||+||+..+. ...++..+++.| -.+|+.++.. +. . ...+.++|+++|..
T Consensus 86 ~~~n~~a~~~--~vDII~Hp~~~~~~~~~~~~~a~~A~e~g-v~lEIn~s~~~~~~~~~R~~~~~~~~~il~l~k~~g~~ 162 (212)
T 1v77_A 86 LRVIRYSIEK--GVDAIISPWVNRKDPGIDHVLAKLMVKKN-VALGFSLRPLLYSNPYERANLLRFMMKAWKLVEKYKVR 162 (212)
T ss_dssp HHHHHHHHHT--TCSEEECTTTTSSSCSCCHHHHHHHHHHT-CEEEEESHHHHHSCHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHhC--CCCEEecccccccCCCCCHHHHHHHHHCC-eEEEEECcHHhcCCcchHHHHHHHHHHHHHHHHhcCCC
Confidence 3444455554 7999999985421 256778888888 7999988652 11 1 13578999999988
Q ss_pred eeecccccCCCC
Q 018376 318 LCLRQISNCDCA 329 (357)
Q Consensus 318 ~t~~~~~GSD~h 329 (357)
.+- |||+|
T Consensus 163 ivi----sSDAh 170 (212)
T 1v77_A 163 RFL----TSSAQ 170 (212)
T ss_dssp EEE----ECCCS
T ss_pred EEE----eCCCC
Confidence 765 89999
No 16
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=93.08 E-value=0.15 Score=46.47 Aligned_cols=61 Identities=15% Similarity=0.188 Sum_probs=45.6
Q ss_pred ceEEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 018376 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPG 133 (357)
Q Consensus 72 ~~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vi~G 133 (357)
++.+|.|||-.......+++++++++.+.|++.+.++-.+ ...+..+.+++++.+..++++
T Consensus 4 m~~iD~H~Hl~~~~~~~~~~~~l~~~~~~Gv~~~v~~~~~-~~~~~~~~~l~~~~~~~i~~~ 64 (272)
T 2y1h_A 4 VGLVDCHCHLSAPDFDRDLDDVLEKAKKANVVALVAVAEH-SGEFEKIMQLSERYNGFVLPC 64 (272)
T ss_dssp CCEEEEEECTTSGGGTTTHHHHHHHHHHTTEEEEEECCSS-GGGHHHHHHHHHHTTTTEEEE
T ss_pred CcEEEEeeCCCchhhhcCHHHHHHHHHHCCCCEEEEeCCC-HHHHHHHHHHHHHCCCCEEEE
Confidence 4689999998765444589999999999999987776332 345667777888776555554
No 17
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=89.57 E-value=0.73 Score=41.35 Aligned_cols=55 Identities=15% Similarity=0.207 Sum_probs=40.2
Q ss_pred ceEEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcC
Q 018376 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFG 127 (357)
Q Consensus 72 ~~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~g 127 (357)
++.+|.|||-....-..+++++++++.+.|++.+.++-.+ ...+..+.+.+++.+
T Consensus 3 m~~iD~H~Hl~~~~~~~~~~~~l~~~~~~Gv~~~v~~~~~-~~~~~~~~~l~~~~~ 57 (259)
T 1zzm_A 3 CRFIDTHCHFDFPPFSGDEEASLQRAAQAGVGKIIVPATE-AENFARVLALAENYQ 57 (259)
T ss_dssp CCEEESCBCTTSTTTTTCHHHHHHHHHHTTEEEEEEECCS-GGGHHHHHHHHHHCT
T ss_pred ceEEEeeecCCchhhccCHHHHHHHHHHcCCCEEEEecCC-HHHHHHHHHHHHhCC
Confidence 3589999998876444579999999999999987765222 344566667776654
No 18
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=88.29 E-value=0.48 Score=44.33 Aligned_cols=54 Identities=20% Similarity=0.210 Sum_probs=40.6
Q ss_pred ceEEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhc
Q 018376 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRF 126 (357)
Q Consensus 72 ~~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~ 126 (357)
++.+|.|||-...+-..+.++++++|++.|++.+.++= .+...+..+.++++++
T Consensus 1 M~~iD~H~HL~~~~~~~d~~~vl~~a~~~gV~~~v~~g-~~~~~~~~~~~la~~~ 54 (287)
T 3rcm_A 1 MQLIDIGVNLTNSSFHDQQAAIVERALEAGVTQMLLTG-TSLAVSEQALELCQQL 54 (287)
T ss_dssp CCEEEEEECTTCGGGTTCHHHHHHHHHHTTEEEEEECC-CSHHHHHHHHHHHHHH
T ss_pred CceEEEeecCCchhcccCHHHHHHHHHHcCCeEEEEec-CCHHHHHHHHHHHHhC
Confidence 36799999998765556899999999999999988862 1233456667777664
No 19
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=86.60 E-value=0.47 Score=45.36 Aligned_cols=63 Identities=16% Similarity=0.227 Sum_probs=42.3
Q ss_pred cccccCCCCceEEceeeeCcCCC--C--------CCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhc
Q 018376 63 QILNRAVDNNVVFELHSHSNFSD--G--------YLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRF 126 (357)
Q Consensus 63 ~~~~~~~~~~~~~DLH~HT~~SD--G--------~~tp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~ 126 (357)
|.|++....++.+|.|||-.... | .-+.++++++|++.|+..+.++= .+...+..+.++++++
T Consensus 17 ~~~~~~~~~m~~iDtH~HL~~~~f~g~y~gk~~h~~d~~~vl~rA~~aGV~~ii~~g-~~~~~~~~~~~La~~~ 89 (325)
T 3ipw_A 17 QGPGSMSMAQQFIDIGANLTDDNYFGNYHGKHYHEEDIDVVLQRAERNGLSHIIITS-GCLNDFKKAIEIINKY 89 (325)
T ss_dssp ------CCCCCEEEEEECTTSGGGGTEETTEECSCCCHHHHHHHHHHTTEEEEEECC-CSHHHHHHHHHHHHHH
T ss_pred cCCcccccCCCeEEEEECCCchHhccccccccccccCHHHHHHHHHHcCCcEEEEcc-CCHHHHHHHHHHHHHC
Confidence 34444333467899999987652 2 46899999999999999887763 2344566677777765
No 20
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=86.57 E-value=0.81 Score=41.20 Aligned_cols=54 Identities=20% Similarity=0.225 Sum_probs=37.5
Q ss_pred eEEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcC
Q 018376 73 VVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFG 127 (357)
Q Consensus 73 ~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~g 127 (357)
+.+|.|||-...+-..+++++++++.+.|++.+.++--+ ......+.+.+++.+
T Consensus 4 ~~iD~H~Hl~~~~~~~~~~~~l~~~~~~Gv~~~v~~~~~-~~~~~~~~~l~~~~~ 57 (264)
T 1xwy_A 4 RMFDIGVNLTSSQFAKDRDDVVACAFDAGVNGLLITGTN-LRESQQAQKLARQYS 57 (264)
T ss_dssp -CEEEEECTTSGGGTTTHHHHHHHHHHTTCCEEEECCCS-HHHHHHHHHHHHHST
T ss_pred cEEEEeeCCCChhhccCHHHHHHHHHHCCCCEEEEeCCC-HHHHHHHHHHHHhCC
Confidence 479999998765434579999999999999987765221 223445566666654
No 21
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=85.63 E-value=0.35 Score=44.60 Aligned_cols=49 Identities=16% Similarity=0.241 Sum_probs=38.5
Q ss_pred eEEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhc
Q 018376 73 VVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRF 126 (357)
Q Consensus 73 ~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~ 126 (357)
+.+|-|||-.+.+ ..++++++|++.|+..+.++ .+...+..+.++++++
T Consensus 2 ~liDtH~HL~~~~---d~~~vl~~a~~~gV~~i~v~--~~~~~~~~~~~la~~~ 50 (254)
T 3gg7_A 2 SLIDFHVHLDLYP---DPVAVARACEERQLTVLSVT--TTPAAWRGTLALAAGR 50 (254)
T ss_dssp CCEEEEECGGGSS---SHHHHHHHHHHTTCEEEECC--SSGGGHHHHHGGGTTC
T ss_pred ceEEEeeCCCCCC---CHHHHHHHHHHCCCcEEEec--CCHHHHHHHHHHHHhC
Confidence 4799999988654 78999999999999987764 3455677777777665
No 22
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=85.19 E-value=0.77 Score=41.17 Aligned_cols=54 Identities=11% Similarity=0.066 Sum_probs=36.8
Q ss_pred eEEceeeeCcCCCC---CCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcC
Q 018376 73 VVFELHSHSNFSDG---YLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFG 127 (357)
Q Consensus 73 ~~~DLH~HT~~SDG---~~tp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~g 127 (357)
+.+|.|||....+- ..+++++++.+.+.|++.+.+.-.+ ......+.+.+++.+
T Consensus 2 ~~iD~H~Hl~~~~~~~~~~~~~~~l~~~~~~Gv~~~v~~~~~-~~~~~~~~~~~~~~p 58 (265)
T 1yix_A 2 FLVDSHCHLDGLDYESLHKDVDDVLAKAAARDVKFCLAVATT-LPSYLHMRDLVGERD 58 (265)
T ss_dssp CEEEEEECGGGSCTTTTCSSHHHHHHHHHHTTEEEEEECCSS-HHHHHHHHHHHCSCT
T ss_pred cEEEEeeCCCchhhcccccCHHHHHHHHHHCCCCEEEEeCCC-HHHHHHHHHHHHHCC
Confidence 58999999865432 5689999999999999997774322 112334445555443
No 23
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=84.84 E-value=0.7 Score=43.00 Aligned_cols=54 Identities=19% Similarity=0.207 Sum_probs=37.8
Q ss_pred eEEceeeeCcCC--CCC--------CCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcC
Q 018376 73 VVFELHSHSNFS--DGY--------LSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFG 127 (357)
Q Consensus 73 ~~~DLH~HT~~S--DG~--------~tp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~g 127 (357)
+.+|.|||-... ++. .++++++++|++.|++.+.++=. +...+..+.+++++.+
T Consensus 2 ~~iD~H~Hl~~~~~~~~~~~~~~h~~d~~~vl~~~~~~GV~~~v~~~~-~~~~~~~~~~la~~~~ 65 (301)
T 2xio_A 2 KFIDIGINLTDPMFRGIYRGVQKHQDDLQDVIGRAVEIGVKKFMITGG-NLQDSKDALHLAQTNG 65 (301)
T ss_dssp CEEEEEECTTCGGGGTEETTEECSCCCHHHHHHHHHHHTEEEEEECCC-SHHHHHHHHHHHTTCT
T ss_pred eEEEEcCCCCChHhcccccccccCccCHHHHHHHHHHCCCCEEEEeCC-CHHHHHHHHHHHHHCC
Confidence 579999997654 332 58999999999999999888732 1223444555555543
No 24
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=84.84 E-value=1.3 Score=39.57 Aligned_cols=54 Identities=20% Similarity=0.255 Sum_probs=37.7
Q ss_pred eEEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcC
Q 018376 73 VVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFG 127 (357)
Q Consensus 73 ~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~g 127 (357)
|.+|.|+|.......-+++++++.+.+.|++.+.+.-.+ ......+.+.+++.+
T Consensus 1 m~iD~H~Hl~~~~~~~~~~~~l~~~~~~Gv~~~v~~~~~-~~~~~~~~~~~~~~p 54 (265)
T 2gzx_A 1 MLIDTHVHLNDEQYDDDLSEVITRAREAGVDRMFVVGFN-KSTIERAMKLIDEYD 54 (265)
T ss_dssp -CEEEEECTTSGGGTTTHHHHHHHHHHTTCCEEEEEECS-HHHHHHHHHHHHHCT
T ss_pred CeEEEeeCCCCcccccCHHHHHHHHHHcCCCEEEEeCCC-HHHHHHHHHHHHhCC
Confidence 468999998765444579999999999999987776543 222344555566554
No 25
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=80.25 E-value=3.9 Score=39.89 Aligned_cols=22 Identities=18% Similarity=-0.040 Sum_probs=18.8
Q ss_pred HHHHHHHHHHcCCeEE--eeCCCC
Q 018376 253 AEVAVQLIHRTGGLAV--LAHPWA 274 (357)
Q Consensus 253 ~eevI~~I~~aGGvaV--LAHP~~ 274 (357)
...++++||+.|+.++ |.|+++
T Consensus 98 ~k~l~davH~~G~~i~~QL~H~Gr 121 (400)
T 4gbu_A 98 WTKIFNAIHEKKSFVWVQLAVLGW 121 (400)
T ss_dssp HHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHhcCCceEEeeeecCc
Confidence 4678999999999987 789875
No 26
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=74.47 E-value=5 Score=35.94 Aligned_cols=43 Identities=14% Similarity=0.050 Sum_probs=34.2
Q ss_pred ChHHHHHHHHHcCCcEEEeecCCCcHHHHHHHHHHHhcCCceee
Q 018376 277 NPAAIIRKLKDVGLHGLEVYRSDGKLVDVNFLEKIDNFLLLLCL 320 (357)
Q Consensus 277 ~~~~li~~l~~~GlDGIEv~~~~~~~~~~~~~~lA~~~~Ll~t~ 320 (357)
...+.++.++++|+||||++.++.. +...+.++++++||-++.
T Consensus 24 ~~~~~l~~~~~~G~~~vEl~~~~~~-~~~~~~~~l~~~gl~~~~ 66 (269)
T 3ngf_A 24 PFLERFRLAAEAGFGGVEFLFPYDF-DADVIARELKQHNLTQVL 66 (269)
T ss_dssp CHHHHHHHHHHTTCSEEECSCCTTS-CHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHcCCCEEEecCCccC-CHHHHHHHHHHcCCcEEE
Confidence 3477899999999999999876542 234589999999998764
No 27
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=74.19 E-value=6.2 Score=35.56 Aligned_cols=42 Identities=7% Similarity=0.000 Sum_probs=23.4
Q ss_pred hHHHHHHHHHcCCcEEEeecCCCcHHHHHHHHHHHhcCCcee
Q 018376 278 PAAIIRKLKDVGLHGLEVYRSDGKLVDVNFLEKIDNFLLLLC 319 (357)
Q Consensus 278 ~~~li~~l~~~GlDGIEv~~~~~~~~~~~~~~lA~~~~Ll~t 319 (357)
..+.++.++++|+||||++..........+.++++++||-++
T Consensus 40 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gl~v~ 81 (287)
T 3kws_A 40 LNEKLDFMEKLGVVGFEPGGGGLAGRVNEIKQALNGRNIKVS 81 (287)
T ss_dssp HHHHHHHHHHTTCCEEECBSTTCGGGHHHHHHHHTTSSCEEC
T ss_pred HHHHHHHHHHcCCCEEEecCCchHHHHHHHHHHHHHcCCeEE
Confidence 345566666666666666654222222346666666666654
No 28
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=73.17 E-value=7.3 Score=37.36 Aligned_cols=22 Identities=32% Similarity=0.271 Sum_probs=18.6
Q ss_pred HHHHHHHHHHcCCeEE--eeCCCC
Q 018376 253 AEVAVQLIHRTGGLAV--LAHPWA 274 (357)
Q Consensus 253 ~eevI~~I~~aGGvaV--LAHP~~ 274 (357)
...++++||+.|+.++ |.|+++
T Consensus 81 ~k~l~~avh~~G~~i~~QL~H~Gr 104 (358)
T 4a3u_A 81 WLPITQAVHDAGGLIFAQLWHMGR 104 (358)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCGG
T ss_pred HHHHHHHHHhcCCceeeccccccc
Confidence 4678999999999877 889875
No 29
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=72.42 E-value=6.1 Score=38.09 Aligned_cols=22 Identities=23% Similarity=0.271 Sum_probs=18.1
Q ss_pred HHHHHHHHHHcCCeEE--eeCCCC
Q 018376 253 AEVAVQLIHRTGGLAV--LAHPWA 274 (357)
Q Consensus 253 ~eevI~~I~~aGGvaV--LAHP~~ 274 (357)
...++++||+.|+.++ |.|+++
T Consensus 89 ~k~l~~avH~~G~~i~~QL~H~Gr 112 (361)
T 3gka_A 89 WRLVTDAVHAAGGRIFLQLWHVGR 112 (361)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCTT
T ss_pred HHHHHHHHHhcCCeEEEeeccCCc
Confidence 4678999999999877 788775
No 30
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=71.45 E-value=6.6 Score=37.86 Aligned_cols=22 Identities=23% Similarity=0.227 Sum_probs=18.2
Q ss_pred HHHHHHHHHHcCCeEE--eeCCCC
Q 018376 253 AEVAVQLIHRTGGLAV--LAHPWA 274 (357)
Q Consensus 253 ~eevI~~I~~aGGvaV--LAHP~~ 274 (357)
...++++||+.|+.++ |.|+++
T Consensus 81 ~k~l~~avH~~G~~i~~QL~H~Gr 104 (362)
T 4ab4_A 81 WNNVTKAVHAAGGRIFLQLWHVGR 104 (362)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCTT
T ss_pred HHHHHHHHHhcCCEEEEEeccCcc
Confidence 4678999999999877 788775
No 31
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=70.03 E-value=4.3 Score=37.25 Aligned_cols=64 Identities=19% Similarity=0.135 Sum_probs=42.6
Q ss_pred eEEceeeeCcCC--CC-----C----CCHH-HH---HHHHHHcCCcEEEEecCCCC-CCHHHHHHHHHhcCCeEEEEEEE
Q 018376 73 VVFELHSHSNFS--DG-----Y----LSPS-KL---VERAHCNGVKVLALTDHDTM-SGIPEAIETARRFGMKIIPGVEI 136 (357)
Q Consensus 73 ~~~DLH~HT~~S--DG-----~----~tp~-el---v~~A~~~Gl~~iaITDHdt~-~g~~~~~~~a~~~gi~vi~GiEi 136 (357)
..+|.|+|...+ +. . ++.. .+ +++|++.|+..+...=++.. .....+.+.+++.++.++.++-+
T Consensus 17 G~iD~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gv~~iv~~~~~~~~~~~~~~~~~~~~~~~~v~~~~G~ 96 (314)
T 2vc7_A 17 GFTLIHEHLRVFSEAVRQQWPHLYNEDEEFRNAVNEVKRAMQFGVKTIVDPTVMGLGRDIRFMEKVVKATGINLVAGTGI 96 (314)
T ss_dssp CSEESSCBSCBCCHHHHHHCGGGCCHHHHHHHHHHHHHHHHHTTCCEEEECCCBTTTCCHHHHHHHHHHHCCEEEECEEB
T ss_pred CCcccccccccCcchhcccCcchhhhcccHHHHHHHHHHHHHcCCCEEEecCCCCCCcCHHHHHHHHHHcCCeEEEEeec
Confidence 579999999763 21 1 0222 23 48899999999877666633 33677778888888777766443
No 32
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=69.90 E-value=2 Score=41.85 Aligned_cols=29 Identities=28% Similarity=0.351 Sum_probs=26.0
Q ss_pred eEEceeeeCcCCCCCCCHHHHHHHHHHcCCcE
Q 018376 73 VVFELHSHSNFSDGYLSPSKLVERAHCNGVKV 104 (357)
Q Consensus 73 ~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~ 104 (357)
.+++||+|- ||+++|+.+++.|+++|++.
T Consensus 30 PKvELH~HL---dGsl~p~tl~~LA~~~g~~l 58 (380)
T 4gxw_A 30 PKVELHCHL---LGAVRHDTFVALAQRSGAPI 58 (380)
T ss_dssp CEEECCBBG---GGCCCHHHHHHHHHHHTCSC
T ss_pred hhHHhhcCC---cCCCCHHHHHHHHHHhCCCC
Confidence 479999996 79999999999999999763
No 33
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=68.65 E-value=3.3 Score=35.25 Aligned_cols=20 Identities=20% Similarity=0.345 Sum_probs=16.5
Q ss_pred CCCCCCHHHHHHHHHHcCCc
Q 018376 84 SDGYLSPSKLVERAHCNGVK 103 (357)
Q Consensus 84 SDG~~tp~elv~~A~~~Gl~ 103 (357)
.||.++.+++.......|+.
T Consensus 70 ~~G~i~~~el~~~l~~lg~~ 89 (196)
T 3dtp_E 70 KDGFISKNDIRATFDSLGRL 89 (196)
T ss_dssp CSSBCCHHHHHHHHHTTSCC
T ss_pred CCCcCCHHHHHHHHHHhCCC
Confidence 38999999998888887754
No 34
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=68.54 E-value=7.4 Score=36.84 Aligned_cols=22 Identities=18% Similarity=0.122 Sum_probs=17.8
Q ss_pred HHHHHHHHHHcCCeEE--eeCCCC
Q 018376 253 AEVAVQLIHRTGGLAV--LAHPWA 274 (357)
Q Consensus 253 ~eevI~~I~~aGGvaV--LAHP~~ 274 (357)
...+++.+|+.|+.++ |.|.++
T Consensus 85 ~~~~~~~vh~~g~~i~~QL~h~Gr 108 (338)
T 1z41_A 85 FAKLTEQVKEQGSKIGIQLAHAGR 108 (338)
T ss_dssp HHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHhcCCEEEEEecCCCc
Confidence 4678899999999765 899764
No 35
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=68.20 E-value=3.3 Score=37.46 Aligned_cols=56 Identities=7% Similarity=0.155 Sum_probs=40.5
Q ss_pred CceEEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcC
Q 018376 71 NNVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFG 127 (357)
Q Consensus 71 ~~~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~g 127 (357)
+--++|.|||-.+.+-..+++++++.+.+.|++.+.++-. +......+.+++++.+
T Consensus 10 ~~~~~~~~~hl~~~~~~~~~~~~l~~~~~~GV~~~v~~~~-~~~~~~~~~~l~~~~p 65 (268)
T 1j6o_A 10 HHHMVDTHAHLHFHQFDDDRNAVISSFEENNIEFVVNVGV-NLEDSKKSLDLSKTSD 65 (268)
T ss_dssp CCCEEEEEECTTSGGGTTTHHHHHHTTTTTTEEEEEEECS-SHHHHHHHHHHHTTCT
T ss_pred cccccccccCCCChhhccCHHHHHHHHHHcCCCEEEEeCC-CHHHHHHHHHHHHHCC
Confidence 3457999999998876779999999999999987766432 1222344556666554
No 36
>3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.50A {Saccharomyces cerevisiae}
Probab=67.94 E-value=5.9 Score=38.86 Aligned_cols=55 Identities=22% Similarity=0.172 Sum_probs=42.5
Q ss_pred ceEEceeeeCcCC--CC--------CCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcC
Q 018376 72 NVVFELHSHSNFS--DG--------YLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFG 127 (357)
Q Consensus 72 ~~~~DLH~HT~~S--DG--------~~tp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~g 127 (357)
+..+|.|||-+.+ +| .-..++++++|++.|+..+.+|= -++.....+.++|+++.
T Consensus 12 ~~~iDih~nL~d~~f~g~y~~~~~h~~D~~~vl~rA~~~GV~~ii~~g-~~l~~s~~~~~La~~~~ 76 (401)
T 3e2v_A 12 LKYYDIGLNLTDPMFHGIYNGKQYHPADYVKLLERAAQRHVKNALVTG-SSIAESQSAIELVSSVK 76 (401)
T ss_dssp CCEEEEEECTTSGGGGTEETTEECSCCCHHHHHHHHHHTTEEEEEECC-CSHHHHHHHHHHHHHHT
T ss_pred CCeEEEEeCcCcHHHhhhccccccCccCHHHHHHHHHHCCCCEEEEec-CCHHHHHHHHHHHHHCC
Confidence 4789999999876 44 25889999999999999998884 23445667778887753
No 37
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=67.46 E-value=7.3 Score=37.26 Aligned_cols=22 Identities=23% Similarity=0.259 Sum_probs=18.4
Q ss_pred HHHHHHHHHHcCCeEE--eeCCCC
Q 018376 253 AEVAVQLIHRTGGLAV--LAHPWA 274 (357)
Q Consensus 253 ~eevI~~I~~aGGvaV--LAHP~~ 274 (357)
...++++||+.|+.++ |.|+++
T Consensus 83 ~~~~~~~vh~~G~~i~~QL~H~Gr 106 (343)
T 3kru_A 83 LKKIVDICKANGAVMGIQLAHAGR 106 (343)
T ss_dssp HHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHhcCCceEeeehhhccC
Confidence 5678999999999877 788765
No 38
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=67.11 E-value=6 Score=37.68 Aligned_cols=22 Identities=27% Similarity=0.247 Sum_probs=18.5
Q ss_pred HHHHHHHHHHcCCeEE--eeCCCC
Q 018376 253 AEVAVQLIHRTGGLAV--LAHPWA 274 (357)
Q Consensus 253 ~eevI~~I~~aGGvaV--LAHP~~ 274 (357)
...++++||+.|+.++ |.|+++
T Consensus 85 ~~~~~~~vh~~G~~i~~QL~H~Gr 108 (340)
T 3gr7_A 85 LRELVGLVKEHGAAIGIQLAHAGR 108 (340)
T ss_dssp HHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHhCCCeEEEEeccCCC
Confidence 5689999999999877 788764
No 39
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=66.96 E-value=11 Score=32.44 Aligned_cols=14 Identities=29% Similarity=0.240 Sum_probs=6.8
Q ss_pred HHHHHHcCCcEEEe
Q 018376 282 IRKLKDVGLHGLEV 295 (357)
Q Consensus 282 i~~l~~~GlDGIEv 295 (357)
++.++++|.|+|=+
T Consensus 70 ~~~~~~~Gad~v~v 83 (211)
T 3f4w_A 70 SQLLFDAGADYVTV 83 (211)
T ss_dssp HHHHHHTTCSEEEE
T ss_pred HHHHHhcCCCEEEE
Confidence 44444455555444
No 40
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=65.12 E-value=11 Score=36.98 Aligned_cols=23 Identities=26% Similarity=0.281 Sum_probs=18.8
Q ss_pred CHHHHHHHHHHcCCeEE--eeCCCC
Q 018376 252 LAEVAVQLIHRTGGLAV--LAHPWA 274 (357)
Q Consensus 252 ~~eevI~~I~~aGGvaV--LAHP~~ 274 (357)
....++++||+.|+.++ |.|+++
T Consensus 105 ~~k~l~~avh~~G~~i~~QL~H~Gr 129 (419)
T 3l5a_A 105 GLTNMASTMKQHGSLAIIQLAHAGR 129 (419)
T ss_dssp HHHHHHHHHHTTSCEEEEEEECCGG
T ss_pred HHHHHHHHHHhcCCEEEEEeccCCC
Confidence 35678999999999877 788875
No 41
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=64.20 E-value=15 Score=32.52 Aligned_cols=43 Identities=14% Similarity=0.186 Sum_probs=26.5
Q ss_pred hHHHHHHHHHcCCcEEEeecCC-------------C-cH-HHHHHHHHHHhcCCceee
Q 018376 278 PAAIIRKLKDVGLHGLEVYRSD-------------G-KL-VDVNFLEKIDNFLLLLCL 320 (357)
Q Consensus 278 ~~~li~~l~~~GlDGIEv~~~~-------------~-~~-~~~~~~~lA~~~~Ll~t~ 320 (357)
..+.++.++++|++|||++... . +. ....+.++++++||-++.
T Consensus 24 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~ 81 (262)
T 3p6l_A 24 LTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVG 81 (262)
T ss_dssp HHHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEE
Confidence 4566777777777777776421 1 11 124577777777777653
No 42
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=63.82 E-value=8.1 Score=36.82 Aligned_cols=23 Identities=22% Similarity=0.169 Sum_probs=18.3
Q ss_pred CHHHHHHHHHHcCCeEE--eeCCCC
Q 018376 252 LAEVAVQLIHRTGGLAV--LAHPWA 274 (357)
Q Consensus 252 ~~eevI~~I~~aGGvaV--LAHP~~ 274 (357)
....++++||+.|+.++ |.|+++
T Consensus 82 ~~~~~~~~vh~~G~~i~~Ql~H~Gr 106 (349)
T 3hgj_A 82 GLKELARRIREAGAVPGIQLAHAGR 106 (349)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHHhCCCeEEEEeccCCc
Confidence 35688999999999877 677654
No 43
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=63.71 E-value=14 Score=35.96 Aligned_cols=22 Identities=23% Similarity=0.274 Sum_probs=17.3
Q ss_pred HHHHHHHHHHcCCeEE--eeCCCC
Q 018376 253 AEVAVQLIHRTGGLAV--LAHPWA 274 (357)
Q Consensus 253 ~eevI~~I~~aGGvaV--LAHP~~ 274 (357)
...++++||+.|+.++ |.|+++
T Consensus 95 ~k~l~~avh~~G~~i~~QL~H~Gr 118 (402)
T 2hsa_B 95 WKKIVDVVHAKGAVIFCQLWHVGR 118 (402)
T ss_dssp HHHHHHHHHHTTCEEEEEEECCTT
T ss_pred HHHHHHHHHhcCCeEEEEeccCCc
Confidence 4678899999999766 788654
No 44
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=63.53 E-value=14 Score=32.68 Aligned_cols=41 Identities=12% Similarity=0.063 Sum_probs=21.3
Q ss_pred HHHHHHHHHcCCcEEEeecCC---C-cHH-HHHHHHHHHhcCCcee
Q 018376 279 AAIIRKLKDVGLHGLEVYRSD---G-KLV-DVNFLEKIDNFLLLLC 319 (357)
Q Consensus 279 ~~li~~l~~~GlDGIEv~~~~---~-~~~-~~~~~~lA~~~~Ll~t 319 (357)
.+.++.++++|++|||++... . +.. ...+.++++++||-++
T Consensus 33 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~ 78 (257)
T 3lmz_A 33 DTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGY 78 (257)
T ss_dssp HHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEE
Confidence 455666666666666665431 1 111 1345566666666554
No 45
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=63.39 E-value=11 Score=36.32 Aligned_cols=22 Identities=23% Similarity=0.294 Sum_probs=17.4
Q ss_pred HHHHHHHHHHcCCeEE--eeCCCC
Q 018376 253 AEVAVQLIHRTGGLAV--LAHPWA 274 (357)
Q Consensus 253 ~eevI~~I~~aGGvaV--LAHP~~ 274 (357)
...++++||+.|+.++ |.|+++
T Consensus 93 ~k~l~~avh~~G~~i~~QL~H~Gr 116 (376)
T 1icp_A 93 WKPIVDAVHAKGGIFFCQIWHVGR 116 (376)
T ss_dssp HHHHHHHHHHTTCEEEEEEECCTT
T ss_pred HHHHHHHHHhcCCeEEEEeecCCC
Confidence 4678899999999766 888654
No 46
>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824}
Probab=62.95 E-value=12 Score=33.31 Aligned_cols=35 Identities=17% Similarity=0.220 Sum_probs=29.2
Q ss_pred eEEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCC
Q 018376 73 VVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDT 112 (357)
Q Consensus 73 ~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~iaITDHdt 112 (357)
|.+|.|+|... .++++++.+.+.|++.+.+.-...
T Consensus 3 m~iD~H~Hl~~-----~~~~~l~~m~~~Gv~~~v~~~~~~ 37 (272)
T 3cjp_A 3 LIIDGHTHVIL-----PVEKHIKIMDEAGVDKTILFSTSI 37 (272)
T ss_dssp CCEEEEEECCS-----SHHHHHHHHHHHTCCEEEEECCSC
T ss_pred eEEEehhhcCC-----CHHHHHHHHHHcCCCEEEEeCCCC
Confidence 68999999854 369999999999999988876543
No 47
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=62.24 E-value=7.9 Score=37.12 Aligned_cols=22 Identities=27% Similarity=0.249 Sum_probs=17.7
Q ss_pred HHHHHHHHHHcCCeEE--eeCCCC
Q 018376 253 AEVAVQLIHRTGGLAV--LAHPWA 274 (357)
Q Consensus 253 ~eevI~~I~~aGGvaV--LAHP~~ 274 (357)
...++++||+.|+.++ |.|+++
T Consensus 82 ~~~~~~~vh~~G~~i~~QL~H~Gr 105 (363)
T 3l5l_A 82 FVPVVQAIKAAGSVPGIQIAHAGR 105 (363)
T ss_dssp HHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHhcCCEEEEEeccCCc
Confidence 4678999999999877 677654
No 48
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=60.94 E-value=9.9 Score=39.38 Aligned_cols=22 Identities=41% Similarity=0.447 Sum_probs=18.0
Q ss_pred HHHHHHHHHHcCCeEE--eeCCCC
Q 018376 253 AEVAVQLIHRTGGLAV--LAHPWA 274 (357)
Q Consensus 253 ~eevI~~I~~aGGvaV--LAHP~~ 274 (357)
...+++.||+.|+..+ |.|+++
T Consensus 91 ~~~~~~~vh~~g~~i~~Ql~h~Gr 114 (690)
T 3k30_A 91 LKRIADAIHEGGGLAGIELAHNGM 114 (690)
T ss_dssp HHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHhcCCEEEEEccCCcc
Confidence 5678999999999866 788664
No 49
>1akh_A Protein (mating-type protein A-1); complex (TWO DNA-binding proteins/DNA), complex, DNA- binding protein, DNA; HET: DNA; 2.50A {Saccharomyces cerevisiae} SCOP: a.4.1.1 PDB: 1f43_A 1yrn_A*
Probab=59.95 E-value=11 Score=26.16 Aligned_cols=25 Identities=20% Similarity=0.274 Sum_probs=13.2
Q ss_pred hhcCCCCCCCCCHHHHhHHHHHhhh
Q 018376 19 KQKRGGGKKKMTAEQSLAFNSVTEW 43 (357)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~ 43 (357)
|+++++++..+|.+|...|...+.-
T Consensus 2 k~k~rr~Rt~ft~~q~~~Le~~f~~ 26 (61)
T 1akh_A 2 KEKSPKGKSSISPQARAFLEEVFRR 26 (61)
T ss_dssp ----------CCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHh
Confidence 3445556678999999999988864
No 50
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=59.88 E-value=8.1 Score=35.39 Aligned_cols=54 Identities=7% Similarity=0.092 Sum_probs=37.0
Q ss_pred ceEEceeeeCcCCC------------CCCCHHHHHHHHHHcCCcEEEEecCCCCCC--HHHHHHHHHhc
Q 018376 72 NVVFELHSHSNFSD------------GYLSPSKLVERAHCNGVKVLALTDHDTMSG--IPEAIETARRF 126 (357)
Q Consensus 72 ~~~~DLH~HT~~SD------------G~~tp~elv~~A~~~Gl~~iaITDHdt~~g--~~~~~~~a~~~ 126 (357)
.+.+|-|+|-...+ ...+++++++.+.+.|++.+.+.-=+ ..+ -..+.+++++.
T Consensus 25 ~~~iDtH~Hl~~~~~p~~~~~~~~p~~~~~~e~~l~~~~~~GV~~~V~v~~~-~~~~~n~~~~~~~~~~ 92 (294)
T 4i6k_A 25 MNCIDTHAHVFSTQDHSIETARYAPDYEATVQSFISHLDEHNFTHGVLVQPS-FLGTNNQAMLNAIQQY 92 (294)
T ss_dssp CCSEEEEECCBCTTSCCCTTCSCCCCSCBCHHHHHHHHHHTTCCEEEEECCG-GGTTCCHHHHHHHHHS
T ss_pred CCceEeeeEeecCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCeEEEecCc-ccccchHHHHHHHHHC
Confidence 46899999986431 14689999999999999998887321 112 13345555554
No 51
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=59.36 E-value=9.8 Score=33.45 Aligned_cols=42 Identities=12% Similarity=0.151 Sum_probs=32.7
Q ss_pred hHHHHHHHHHcCCcEEEeecCCCcHHHHHHHHHHHhcCCceee
Q 018376 278 PAAIIRKLKDVGLHGLEVYRSDGKLVDVNFLEKIDNFLLLLCL 320 (357)
Q Consensus 278 ~~~li~~l~~~GlDGIEv~~~~~~~~~~~~~~lA~~~~Ll~t~ 320 (357)
..+.++.++++|++|||++.++.. +...+.++++++||-++.
T Consensus 17 ~~~~l~~~~~~G~~~vEl~~~~~~-~~~~~~~~l~~~gl~~~~ 58 (260)
T 1k77_A 17 FIERFAAARKAGFDAVEFLFPYNY-STLQIQKQLEQNHLTLAL 58 (260)
T ss_dssp GGGHHHHHHHHTCSEEECSCCTTS-CHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHhCCCEEEecCCCCC-CHHHHHHHHHHcCCceEE
Confidence 456788889999999999876432 223588999999998774
No 52
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...
Probab=59.14 E-value=4.5 Score=39.13 Aligned_cols=30 Identities=27% Similarity=0.495 Sum_probs=26.8
Q ss_pred ceEEceeeeCcCCCCCCCHHHHHHHHHHcCCcE
Q 018376 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVKV 104 (357)
Q Consensus 72 ~~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~ 104 (357)
..+++||+|- ||+++|+.+.+.|+++|++.
T Consensus 6 lPK~ELH~HL---~Gsl~p~tl~~La~~~~~~l 35 (367)
T 3iar_A 6 KPKVELHVHL---DGSIKPETILYYGRRRGIAL 35 (367)
T ss_dssp SCEEECCBBG---GGSCCHHHHHHHHHHHTCCC
T ss_pred CCeeEeeecc---cCCCCHHHHHHHHHhcCCCC
Confidence 3589999998 89999999999999999753
No 53
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=58.83 E-value=7.5 Score=34.84 Aligned_cols=19 Identities=21% Similarity=0.522 Sum_probs=10.4
Q ss_pred HHHHHHHHHcCCcEEEeec
Q 018376 279 AAIIRKLKDVGLHGLEVYR 297 (357)
Q Consensus 279 ~~li~~l~~~GlDGIEv~~ 297 (357)
.+.++.++++|++|||++.
T Consensus 18 ~~~l~~~~~~G~~~vEl~~ 36 (286)
T 3dx5_A 18 TDIVQFAYENGFEGIELWG 36 (286)
T ss_dssp HHHHHHHHHTTCCEEEEEH
T ss_pred HHHHHHHHHhCCCEEEEcc
Confidence 4455555555556666543
No 54
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=58.52 E-value=24 Score=34.61 Aligned_cols=22 Identities=18% Similarity=0.188 Sum_probs=17.6
Q ss_pred HHHHHHHHHHcCCeEE--eeCCCC
Q 018376 253 AEVAVQLIHRTGGLAV--LAHPWA 274 (357)
Q Consensus 253 ~eevI~~I~~aGGvaV--LAHP~~ 274 (357)
...++++||+.|+.++ |.|+++
T Consensus 94 ~k~l~~avH~~G~~i~~QL~H~Gr 117 (407)
T 3tjl_A 94 WKVITDKVHANGSFVSTQLIFLGR 117 (407)
T ss_dssp HHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHhcCCEEEEEeccCCC
Confidence 4678899999999877 678765
No 55
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=58.18 E-value=4.8 Score=38.52 Aligned_cols=30 Identities=37% Similarity=0.547 Sum_probs=26.9
Q ss_pred ceEEceeeeCcCCCCCCCHHHHHHHHHHcCCcE
Q 018376 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVKV 104 (357)
Q Consensus 72 ~~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~ 104 (357)
..+++||+|- ||+++|+.+.+.|+++|++.
T Consensus 13 lPK~ELH~Hl---~Gsl~p~tl~~la~~~~~~l 42 (343)
T 3rys_A 13 PPVAELHLHI---EGTLQPELIFALAERNGIEL 42 (343)
T ss_dssp CCEEECSBBG---GGGCCHHHHHHHHHHTTCCC
T ss_pred CCceeeEecC---ccCCCHHHHHHHHHhcCCCC
Confidence 3599999998 89999999999999999863
No 56
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=58.18 E-value=4.8 Score=38.20 Aligned_cols=29 Identities=34% Similarity=0.423 Sum_probs=26.4
Q ss_pred eEEceeeeCcCCCCCCCHHHHHHHHHHcCCcE
Q 018376 73 VVFELHSHSNFSDGYLSPSKLVERAHCNGVKV 104 (357)
Q Consensus 73 ~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~ 104 (357)
.+++||+|- ||+++|+.+.+.|+++|++.
T Consensus 11 PK~ELH~Hl---~Gsl~~~t~~~la~~~~~~l 39 (326)
T 3pao_A 11 PKAELHLHL---EGTLEPELLFALAERNRIAL 39 (326)
T ss_dssp CEEECSBBG---GGGCCHHHHHHHHHHTTCCC
T ss_pred CceEEEecc---cCCCCHHHHHHHHHhcCCCC
Confidence 489999998 89999999999999999863
No 57
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=57.32 E-value=18 Score=34.76 Aligned_cols=22 Identities=18% Similarity=0.181 Sum_probs=17.1
Q ss_pred HHHHHHHHHHcCCeEE--eeCCCC
Q 018376 253 AEVAVQLIHRTGGLAV--LAHPWA 274 (357)
Q Consensus 253 ~eevI~~I~~aGGvaV--LAHP~~ 274 (357)
...++++||+.|+.++ |.|+++
T Consensus 83 ~~~l~~~vh~~g~~i~~QL~H~Gr 106 (365)
T 2gou_A 83 WRIVTEAVHAKGCAIFAQLWHVGR 106 (365)
T ss_dssp HHHHHHHHHHHSCEEEEEEECCTT
T ss_pred HHHHHHHHHhcCCeEEEEeecCCC
Confidence 4678889999999765 788654
No 58
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=56.14 E-value=17 Score=34.92 Aligned_cols=22 Identities=18% Similarity=0.072 Sum_probs=16.8
Q ss_pred HHHHHHHHHHcCCeEE--eeCCCC
Q 018376 253 AEVAVQLIHRTGGLAV--LAHPWA 274 (357)
Q Consensus 253 ~eevI~~I~~aGGvaV--LAHP~~ 274 (357)
...++++||+.|+.++ |.|+++
T Consensus 83 ~~~l~~~vh~~g~~i~~QL~H~Gr 106 (364)
T 1vyr_A 83 WKKITAGVHAEDGRIAVQLWHTGR 106 (364)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCTT
T ss_pred HHHHHHHHHhcCCeEEEEeccCCc
Confidence 4677889999998755 788664
No 59
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=55.95 E-value=14 Score=33.16 Aligned_cols=43 Identities=16% Similarity=0.060 Sum_probs=31.8
Q ss_pred hHHHHHHHHHcCCcEEEeecCC---Cc-HHHHHHHHHHHhcCCceee
Q 018376 278 PAAIIRKLKDVGLHGLEVYRSD---GK-LVDVNFLEKIDNFLLLLCL 320 (357)
Q Consensus 278 ~~~li~~l~~~GlDGIEv~~~~---~~-~~~~~~~~lA~~~~Ll~t~ 320 (357)
..+.++.++++|+||||++... .. .....+.++++++||-++.
T Consensus 19 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~i~~ 65 (294)
T 3vni_A 19 YKYYIEKVAKLGFDILEIAASPLPFYSDIQINELKACAHGNGITLTV 65 (294)
T ss_dssp HHHHHHHHHHHTCSEEEEESTTGGGCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHcCCCEEEecCcccCCcCHHHHHHHHHHHHHcCCeEEE
Confidence 4678888899999999998532 11 2224688999999998764
No 60
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=55.66 E-value=23 Score=31.34 Aligned_cols=43 Identities=5% Similarity=0.084 Sum_probs=31.3
Q ss_pred CChHHHHHHHHHcCCcEEEeecCC-C-------c-HHHHHHHHHHHhcCCce
Q 018376 276 KNPAAIIRKLKDVGLHGLEVYRSD-G-------K-LVDVNFLEKIDNFLLLL 318 (357)
Q Consensus 276 ~~~~~li~~l~~~GlDGIEv~~~~-~-------~-~~~~~~~~lA~~~~Ll~ 318 (357)
....+.++.++++|+||||++... . + .....+.++++++||-+
T Consensus 12 ~~l~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~ 63 (285)
T 1qtw_A 12 GGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 (285)
T ss_dssp TCHHHHHHHHHHTTCSEEECCSSCSSCSSCCCCCHHHHHHHHHHHHHTTCCG
T ss_pred cCHHHHHHHHHHcCCCEEEeeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 345778899999999999996421 1 1 22246889999999974
No 61
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=55.57 E-value=24 Score=32.09 Aligned_cols=62 Identities=15% Similarity=0.160 Sum_probs=44.3
Q ss_pred HHHHHHHHcC-CeEEeeCCCCCCChHHHHHHHHHcCCcEEEeecCCCcHHHHHHHHHHHhcCCce
Q 018376 255 VAVQLIHRTG-GLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDGKLVDVNFLEKIDNFLLLL 318 (357)
Q Consensus 255 evI~~I~~aG-GvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~~~~~~~~~~~lA~~~~Ll~ 318 (357)
++|+.|++.. -+++-+|-. ..++...++.++++|.|.|-+...... .-.+..+.++++|+..
T Consensus 75 ~~v~~lr~~~p~~~ldvHLm-v~~p~~~i~~~~~aGAd~itvH~Ea~~-~~~~~i~~ir~~G~k~ 137 (246)
T 3inp_A 75 MVLKALRDYGITAGMDVHLM-VKPVDALIESFAKAGATSIVFHPEASE-HIDRSLQLIKSFGIQA 137 (246)
T ss_dssp HHHHHHHHHTCCSCEEEEEE-CSSCHHHHHHHHHHTCSEEEECGGGCS-CHHHHHHHHHTTTSEE
T ss_pred HHHHHHHHhCCCCeEEEEEe-eCCHHHHHHHHHHcCCCEEEEccccch-hHHHHHHHHHHcCCeE
Confidence 6888888887 788888854 345667888889999999988653321 1124677788888754
No 62
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=55.21 E-value=23 Score=31.10 Aligned_cols=68 Identities=12% Similarity=0.006 Sum_probs=31.2
Q ss_pred CCHHHHHHHHHHcC--CeEEee-CCC----CCCChHHHHHHHHHcCCcE--EEeecCCCc--HH----HHHHHHHHHhcC
Q 018376 251 PLAEVAVQLIHRTG--GLAVLA-HPW----ALKNPAAIIRKLKDVGLHG--LEVYRSDGK--LV----DVNFLEKIDNFL 315 (357)
Q Consensus 251 ~~~eevI~~I~~aG--GvaVLA-HP~----~~~~~~~li~~l~~~GlDG--IEv~~~~~~--~~----~~~~~~lA~~~~ 315 (357)
.+++++++.++++| ||=+.. .|. ......++-+.+.+.||.- +-+.++... .. .....++|.+.|
T Consensus 19 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG 98 (272)
T 2q02_A 19 LSIEAFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEIVTINAVYPFNQLTEEVVKKTEGLLRDAQGVG 98 (272)
T ss_dssp SCHHHHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEEEEEEEETTTTSCCHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCeEEechhhhccCCcHHHHHHHHHHHHHHHHHhC
Confidence 35667777777766 333332 121 0112344445556666543 222222211 11 134566677776
Q ss_pred Cce
Q 018376 316 LLL 318 (357)
Q Consensus 316 Ll~ 318 (357)
.-.
T Consensus 99 ~~~ 101 (272)
T 2q02_A 99 ARA 101 (272)
T ss_dssp CSE
T ss_pred CCE
Confidence 543
No 63
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=55.04 E-value=29 Score=30.75 Aligned_cols=43 Identities=12% Similarity=0.129 Sum_probs=33.2
Q ss_pred hHHHHHHHHHcCCcEEEeecCCC-c---HHHHHHHHHHHhcCCceee
Q 018376 278 PAAIIRKLKDVGLHGLEVYRSDG-K---LVDVNFLEKIDNFLLLLCL 320 (357)
Q Consensus 278 ~~~li~~l~~~GlDGIEv~~~~~-~---~~~~~~~~lA~~~~Ll~t~ 320 (357)
..+.++.++++|+||||+..... . .....+.++++++||-++.
T Consensus 19 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~ 65 (290)
T 2qul_A 19 FPATAKRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLGLTVMC 65 (290)
T ss_dssp HHHHHHHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcCCceEE
Confidence 46788889999999999987542 1 2234688999999998764
No 64
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=54.20 E-value=17 Score=32.61 Aligned_cols=43 Identities=12% Similarity=0.013 Sum_probs=36.2
Q ss_pred CCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcCCeE
Q 018376 88 LSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKI 130 (357)
Q Consensus 88 ~tp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~v 130 (357)
.++++.++.+++.|++.|-+.-.+......++.+.+++.|+.+
T Consensus 38 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gl~v 80 (287)
T 3kws_A 38 ESLNEKLDFMEKLGVVGFEPGGGGLAGRVNEIKQALNGRNIKV 80 (287)
T ss_dssp SSHHHHHHHHHHTTCCEEECBSTTCGGGHHHHHHHHTTSSCEE
T ss_pred CCHHHHHHHHHHcCCCEEEecCCchHHHHHHHHHHHHHcCCeE
Confidence 6999999999999999999988754445677888888888875
No 65
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=54.15 E-value=32 Score=30.41 Aligned_cols=50 Identities=4% Similarity=-0.172 Sum_probs=39.3
Q ss_pred CcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcCCeEE
Q 018376 81 SNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKII 131 (357)
Q Consensus 81 T~~SDG~~tp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vi 131 (357)
+++.-+.+++++.++.+++.|++.|-+..-. -....++.+.+++.|+.+.
T Consensus 16 ~~~~f~~~~~~~~l~~~~~~G~~~vEl~~~~-~~~~~~~~~~l~~~gl~~~ 65 (269)
T 3ngf_A 16 LSTMFNEVPFLERFRLAAEAGFGGVEFLFPY-DFDADVIARELKQHNLTQV 65 (269)
T ss_dssp TTTSCTTSCHHHHHHHHHHTTCSEEECSCCT-TSCHHHHHHHHHHTTCEEE
T ss_pred chhhhccCCHHHHHHHHHHcCCCEEEecCCc-cCCHHHHHHHHHHcCCcEE
Confidence 3444567899999999999999999997532 2347788888889998763
No 66
>2ecc_A Homeobox and leucine zipper protein homez; homeobox domain, transcription factor, leucine zipper- containing factor, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=54.09 E-value=22 Score=26.46 Aligned_cols=22 Identities=27% Similarity=0.231 Sum_probs=19.6
Q ss_pred cCCCCCCCCCHHHHhHHHHHhh
Q 018376 21 KRGGGKKKMTAEQSLAFNSVTE 42 (357)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~ 42 (357)
.+|.++.++|.+|...|+..+.
T Consensus 2 ~~g~~r~kfT~~Ql~~Le~~F~ 23 (76)
T 2ecc_A 2 SSGSSGKRKTKEQLAILKSFFL 23 (76)
T ss_dssp CCSCCCCCCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHH
Confidence 4788899999999999998887
No 67
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=53.95 E-value=10 Score=34.02 Aligned_cols=68 Identities=10% Similarity=-0.061 Sum_probs=42.7
Q ss_pred CCCHHHHHHHHHHcCCeEE-eeCCCCCCChHHHHHHHHHcCCcEEEeecCCC-cH-------H-HHHHHHHHHhcCCcee
Q 018376 250 EPLAEVAVQLIHRTGGLAV-LAHPWALKNPAAIIRKLKDVGLHGLEVYRSDG-KL-------V-DVNFLEKIDNFLLLLC 319 (357)
Q Consensus 250 ~~~~eevI~~I~~aGGvaV-LAHP~~~~~~~~li~~l~~~GlDGIEv~~~~~-~~-------~-~~~~~~lA~~~~Ll~t 319 (357)
..+++++++.++++|-=.| +.+++. ...++-+.+.+.||.-.-++++.. .. + .....++|.++|.-..
T Consensus 30 ~~~~~~~l~~~~~~G~~~vEl~~~~~--~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v 107 (301)
T 3cny_A 30 DNNLQQLLSDIVVAGFQGTEVGGFFP--GPEKLNYELKLRNLEIAGQWFSSYIIRDGIEKASEAFEKHCQYLKAINAPVA 107 (301)
T ss_dssp TCCHHHHHHHHHHHTCCEECCCTTCC--CHHHHHHHHHHTTCEECEEEEEECHHHHHHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred CCCHHHHHHHHHHhCCCEEEecCCCC--CHHHHHHHHHHCCCeEEEEeccCCCChhhHHHHHHHHHHHHHHHHHcCCCEE
Confidence 3578999999999984444 446543 456666777888876443333221 11 1 1357789999997643
No 68
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=53.89 E-value=17 Score=35.02 Aligned_cols=22 Identities=27% Similarity=0.262 Sum_probs=16.9
Q ss_pred HHHHHHHHHHcCCeEE--eeCCCC
Q 018376 253 AEVAVQLIHRTGGLAV--LAHPWA 274 (357)
Q Consensus 253 ~eevI~~I~~aGGvaV--LAHP~~ 274 (357)
...++++||+.|+.++ |.|+++
T Consensus 87 ~k~l~~avh~~G~~i~~QL~H~Gr 110 (377)
T 2r14_A 87 WKGVVEAVHAKGGRIALQLWHVGR 110 (377)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCTT
T ss_pred HHHHHHHHhhcCCeEEEEccCCcc
Confidence 4678889999998755 788654
No 69
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=53.63 E-value=19 Score=32.44 Aligned_cols=44 Identities=9% Similarity=-0.015 Sum_probs=32.5
Q ss_pred ChHHHHHHHHHcCCcEEEeecCCC---------cHH-HHHHHHHHHhcCCceee
Q 018376 277 NPAAIIRKLKDVGLHGLEVYRSDG---------KLV-DVNFLEKIDNFLLLLCL 320 (357)
Q Consensus 277 ~~~~li~~l~~~GlDGIEv~~~~~---------~~~-~~~~~~lA~~~~Ll~t~ 320 (357)
...+.++.++++|+||||++.... +.. ...+.++++++||-++.
T Consensus 31 ~~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~ 84 (295)
T 3cqj_A 31 CWLERLQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETGVRVPS 84 (295)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHHCCEEEE
T ss_pred CHHHHHHHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHcCCeEEE
Confidence 346788888999999999986532 112 24688999999998764
No 70
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=52.99 E-value=18 Score=33.82 Aligned_cols=60 Identities=17% Similarity=0.108 Sum_probs=38.8
Q ss_pred eEEceeeeCcCCCCC------------CCHHH-H---HHHHHHcCCcEEEEecCC-CCCCHHHHHHHHHhcCCeEEE
Q 018376 73 VVFELHSHSNFSDGY------------LSPSK-L---VERAHCNGVKVLALTDHD-TMSGIPEAIETARRFGMKIIP 132 (357)
Q Consensus 73 ~~~DLH~HT~~SDG~------------~tp~e-l---v~~A~~~Gl~~iaITDHd-t~~g~~~~~~~a~~~gi~vi~ 132 (357)
..+|.|+|-.+.-+. -++++ + +++|++.|+..+...=-+ ....+..+.+.+++.++.++.
T Consensus 16 GliD~H~HL~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~~~aGV~~iv~~~~~~~~~~~~~~~~la~~~~~~i~~ 92 (330)
T 2ob3_A 16 GFTLTHEHICGSSAGFLRAWPEFFGSRKALAEKAVRGLRRARAAGVRTIVDVSTFDIGRDVSLLAEVSRAADVHIVA 92 (330)
T ss_dssp CSEEEEECSEECCTTHHHHCGGGGSCHHHHHHHHHHHHHHHHHTTCCEEEECCCGGGTCCHHHHHHHHHHHTCEEEC
T ss_pred CCceeeeCeecCCchhccCCCchhhhccCHHHHHHHHHHHHHHcCCCEEEeCCCCCcCCCHHHHHHHHHHhCCcEEE
Confidence 479999998763111 12334 3 788999999886443322 234577778888887765553
No 71
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=52.74 E-value=20 Score=31.79 Aligned_cols=42 Identities=5% Similarity=0.158 Sum_probs=30.6
Q ss_pred ChHHHHHHHHHcCCcEEEeecCCC--------c-HHHHHHHHHHHhcCCce
Q 018376 277 NPAAIIRKLKDVGLHGLEVYRSDG--------K-LVDVNFLEKIDNFLLLL 318 (357)
Q Consensus 277 ~~~~li~~l~~~GlDGIEv~~~~~--------~-~~~~~~~~lA~~~~Ll~ 318 (357)
...+.++.++++|++|||++.... + .....+.++++++||-+
T Consensus 13 ~~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~ 63 (287)
T 2x7v_A 13 GFDRVPQDTVNIGGNSFQIFPHNARSWSAKLPSDEAATKFKREMKKHGIDW 63 (287)
T ss_dssp CGGGHHHHHHHTTCSEEEECSCCCSSSCCCCCCHHHHHHHHHHHHHHTCCG
T ss_pred CHHHHHHHHHHcCCCEEEEeCCCcccccccCCCHHHHHHHHHHHHHcCCCc
Confidence 446678889999999999975210 1 12246889999999974
No 72
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=50.54 E-value=15 Score=34.08 Aligned_cols=43 Identities=12% Similarity=-0.031 Sum_probs=30.2
Q ss_pred hHHHHHHHHHc-CCcEEEeecCCCc-HHHHHHHHHHHhcCCceee
Q 018376 278 PAAIIRKLKDV-GLHGLEVYRSDGK-LVDVNFLEKIDNFLLLLCL 320 (357)
Q Consensus 278 ~~~li~~l~~~-GlDGIEv~~~~~~-~~~~~~~~lA~~~~Ll~t~ 320 (357)
..+.++.++++ |++|||+..+... .....+.++++++||-++.
T Consensus 35 ~~e~l~~aa~~~G~~~VEl~~~~~~~~~~~~l~~~l~~~Gl~i~~ 79 (333)
T 3ktc_A 35 TIDQINAAKEVGELSYVDLPYPFTPGVTLSEVKDALKDAGLKAIG 79 (333)
T ss_dssp HHHHHHHHHHHSSEEEEEEEESCSTTCCHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHhCCCCEEEecCCCcchhHHHHHHHHHHHcCCeEEE
Confidence 46678888888 8888888765532 2223578888888887653
No 73
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=50.53 E-value=30 Score=35.98 Aligned_cols=70 Identities=17% Similarity=0.192 Sum_probs=48.2
Q ss_pred CCCHHHHHHHHHHcC-CeEEeeCCCCC-CChHHHHHHHHHcCCcEEEeec-CCCcHHH----HHHHHHHHhcCCcee
Q 018376 250 EPLAEVAVQLIHRTG-GLAVLAHPWAL-KNPAAIIRKLKDVGLHGLEVYR-SDGKLVD----VNFLEKIDNFLLLLC 319 (357)
Q Consensus 250 ~~~~eevI~~I~~aG-GvaVLAHP~~~-~~~~~li~~l~~~GlDGIEv~~-~~~~~~~----~~~~~lA~~~~Ll~t 319 (357)
...++++++.+|+-| |+.+..+...+ ...++..+.+.+.|++||=+=+ +...+.. ..+.+-|.+|+|++.
T Consensus 346 ~~di~~l~~Ya~~kgV~i~lw~~~~~~~~~~~~~~~~~~~~Gv~gvK~Df~~~~~Q~~v~~y~~i~~~aA~~~l~V~ 422 (641)
T 3a24_A 346 EIDLKELVDYAASKNVGIILWAGYHAFERDMENVCRHYAEMGVKGFKVDFMDRDDQEMTAFNYRAAEMCAKYKLILD 422 (641)
T ss_dssp TCCHHHHHHHHHHTTCEEEEEEEHHHHHTSHHHHHHHHHHHTCCEEEEECCCCCSHHHHHHHHHHHHHHHHTTCEEE
T ss_pred cCCHHHHHHHHHhcCCEEEEEeeCcchHHHHHHHHHHHHHcCCCEEEECCCCCCcHHHHHHHHHHHHHHHHcCCEEE
Confidence 367999999999987 33333333222 2346678889999999999944 3343332 356788999999974
No 74
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=50.51 E-value=13 Score=33.50 Aligned_cols=42 Identities=17% Similarity=0.121 Sum_probs=31.9
Q ss_pred HHHHHHHHHcCCcEEEeecCCC-cHHHHHHHHHHHhcCCceee
Q 018376 279 AAIIRKLKDVGLHGLEVYRSDG-KLVDVNFLEKIDNFLLLLCL 320 (357)
Q Consensus 279 ~~li~~l~~~GlDGIEv~~~~~-~~~~~~~~~lA~~~~Ll~t~ 320 (357)
.+.++.++++|+||||++.... ......+.++++++||-++.
T Consensus 44 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~l~~~gl~~~~ 86 (290)
T 2zvr_A 44 RKGMELAKRVGYQAVEIAVRDPSIVDWNEVKILSEELNLPICA 86 (290)
T ss_dssp HHHHHHHHHHTCSEEEEECSCGGGSCHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHhCCCEEEEcCCCcchhhHHHHHHHHHHcCCeEEE
Confidence 5678888999999999987532 12224688999999998854
No 75
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=49.86 E-value=31 Score=30.28 Aligned_cols=57 Identities=5% Similarity=-0.019 Sum_probs=40.2
Q ss_pred ceEEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCC-----CHHHHHHHHHhcCCeEE
Q 018376 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMS-----GIPEAIETARRFGMKII 131 (357)
Q Consensus 72 ~~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~iaITDHdt~~-----g~~~~~~~a~~~gi~vi 131 (357)
.+++=++..|.. .+++++.++.+++.|++.|-+...+-.. ...++.+.+++.|+.+.
T Consensus 17 ~~klg~~~~~~~---~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~ 78 (257)
T 3lmz_A 17 PFHLGMAGYTFV---NFDLDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGY 78 (257)
T ss_dssp SSEEEECGGGGT---TSCHHHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEE
T ss_pred ceEEEEEEEeec---CCCHHHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEE
Confidence 355555444433 3699999999999999999998753111 13567777888998764
No 76
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=49.75 E-value=20 Score=32.05 Aligned_cols=42 Identities=12% Similarity=0.091 Sum_probs=32.4
Q ss_pred HHHHHHHHHcCCcEEEeecCCC---cH-HHHHHHHHHHhcCCceee
Q 018376 279 AAIIRKLKDVGLHGLEVYRSDG---KL-VDVNFLEKIDNFLLLLCL 320 (357)
Q Consensus 279 ~~li~~l~~~GlDGIEv~~~~~---~~-~~~~~~~lA~~~~Ll~t~ 320 (357)
.+.++.++++|+||||++.... +. ....+.++++++||-++.
T Consensus 24 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~ 69 (290)
T 3tva_A 24 GVHLEVAQDLKVPTVQVHAPHPHTRTREHAQAFRAKCDAAGIQVTV 69 (290)
T ss_dssp SBCHHHHHHTTCSEEEEECCCGGGCSHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHcCCCEEEecCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 3568889999999999997542 12 234689999999998875
No 77
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=49.39 E-value=16 Score=38.07 Aligned_cols=22 Identities=27% Similarity=0.193 Sum_probs=17.4
Q ss_pred HHHHHHHHHHcCCeEE--eeCCCC
Q 018376 253 AEVAVQLIHRTGGLAV--LAHPWA 274 (357)
Q Consensus 253 ~eevI~~I~~aGGvaV--LAHP~~ 274 (357)
...+++.+|+.|+.++ |.|.++
T Consensus 86 ~~~~~~~vh~~g~~i~~Ql~h~Gr 109 (729)
T 1o94_A 86 LKAMTDEVHKYGALAGVELWYGGA 109 (729)
T ss_dssp HHHHHHHHHTTTCEEEEEEECCGG
T ss_pred HHHHHHHHHhCCCeEEEEecCCCc
Confidence 4678899999999766 889654
No 78
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=49.17 E-value=16 Score=37.56 Aligned_cols=23 Identities=17% Similarity=0.312 Sum_probs=18.1
Q ss_pred CHHHHHHHHHHcCCeEE--eeCCCC
Q 018376 252 LAEVAVQLIHRTGGLAV--LAHPWA 274 (357)
Q Consensus 252 ~~eevI~~I~~aGGvaV--LAHP~~ 274 (357)
....+++.+|+.|+..+ |.|+++
T Consensus 82 ~~~~~~~~vh~~g~~i~~Ql~h~Gr 106 (671)
T 1ps9_A 82 HHRTITEAVHQEGGKIALQILHTGR 106 (671)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCCGG
T ss_pred HHHHHHHHHHhcCCEEEEEeccCCc
Confidence 35678899999999765 889654
No 79
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=48.91 E-value=17 Score=32.07 Aligned_cols=41 Identities=5% Similarity=0.129 Sum_probs=20.5
Q ss_pred CCHHHHHHHHHHcC--CeEEe-eCC---C-CCCChHHHHHHHHHcCCc
Q 018376 251 PLAEVAVQLIHRTG--GLAVL-AHP---W-ALKNPAAIIRKLKDVGLH 291 (357)
Q Consensus 251 ~~~eevI~~I~~aG--GvaVL-AHP---~-~~~~~~~li~~l~~~GlD 291 (357)
.++++.++.++++| ||=+. ... + ......++-+.+.+.||.
T Consensus 14 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 61 (278)
T 1i60_A 14 SNLKLDLELCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTHHIK 61 (278)
T ss_dssp CCHHHHHHHHHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTSSCE
T ss_pred CCHHHHHHHHHHhCCCEEEEccHHHHHHHhccCCHHHHHHHHHHcCCC
Confidence 45677777777776 33333 210 0 112234455556666665
No 80
>3h4u_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified} PDB: 3hpa_A
Probab=48.14 E-value=34 Score=32.89 Aligned_cols=62 Identities=23% Similarity=0.312 Sum_probs=40.2
Q ss_pred eEEceeeeCcCC--CCC---------------------CCHHHH-------HHHHHHcCCcEEEEecCC----CCCCHHH
Q 018376 73 VVFELHSHSNFS--DGY---------------------LSPSKL-------VERAHCNGVKVLALTDHD----TMSGIPE 118 (357)
Q Consensus 73 ~~~DLH~HT~~S--DG~---------------------~tp~el-------v~~A~~~Gl~~iaITDHd----t~~g~~~ 118 (357)
-+||.|+|...+ .|. ++++++ +..+.+.|+..+ .||. ...+...
T Consensus 88 GlID~H~Hl~~~~~rg~~~~~~~~l~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv--~d~~~~~~~~~~~~~ 165 (479)
T 3h4u_A 88 GLVNTHHHMYQSLTRAVPAAQNAELFGWLTNLYKIWAHLTPEMIEVSTLTAMAELLQSGCTTS--SDHLYIYPNGSRLDD 165 (479)
T ss_dssp CEEECCCCGGGGGSCSCTTTTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTTEEEE--ECCBCCCCTTCCHHH
T ss_pred ceeecccccchhhhccccccCCCCHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHhCCeEEE--EECccccCCcchHHH
Confidence 489999999765 221 566654 455667887655 4542 2233566
Q ss_pred HHHHHHhcCCeEEEEEEE
Q 018376 119 AIETARRFGMKIIPGVEI 136 (357)
Q Consensus 119 ~~~~a~~~gi~vi~GiEi 136 (357)
+.+.+++.|++.+.+...
T Consensus 166 ~~~~~~~~g~r~~~~~~~ 183 (479)
T 3h4u_A 166 SIGAAQRIGMRFHASRGA 183 (479)
T ss_dssp HHHHHHHHTCEEEEEEEE
T ss_pred HHHHHHHcCCEEEEEeee
Confidence 777778889887766544
No 81
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=47.83 E-value=7.1 Score=34.59 Aligned_cols=13 Identities=23% Similarity=0.179 Sum_probs=8.1
Q ss_pred CHHHHHHHHHHcC
Q 018376 252 LAEVAVQLIHRTG 264 (357)
Q Consensus 252 ~~eevI~~I~~aG 264 (357)
+++++++.++++|
T Consensus 19 ~~~~~l~~~~~~G 31 (275)
T 3qc0_A 19 GFAEAVDICLKHG 31 (275)
T ss_dssp CHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHcC
Confidence 4566666666665
No 82
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=47.12 E-value=20 Score=32.75 Aligned_cols=43 Identities=28% Similarity=0.295 Sum_probs=32.2
Q ss_pred hHHHHHHHHHcCCcEEEeecC----CCcHHHHHHHHHHHhcCCceee
Q 018376 278 PAAIIRKLKDVGLHGLEVYRS----DGKLVDVNFLEKIDNFLLLLCL 320 (357)
Q Consensus 278 ~~~li~~l~~~GlDGIEv~~~----~~~~~~~~~~~lA~~~~Ll~t~ 320 (357)
..+.++.++++|++|||++.. ....+...+.++++++||-++.
T Consensus 31 ~~~~l~~~a~~G~~~VEl~~~~~~~~~~~~~~~~~~~l~~~GL~v~~ 77 (303)
T 3l23_A 31 VAANLRKVKDMGYSKLELAGYGKGAIGGVPMMDFKKMAEDAGLKIIS 77 (303)
T ss_dssp HHHHHHHHHHTTCCEEEECCEETTEETTEEHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHcCCCEEEeccccCcccCCCCHHHHHHHHHHcCCeEEE
Confidence 467888999999999999751 1111224588999999999864
No 83
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=46.56 E-value=34 Score=31.46 Aligned_cols=41 Identities=27% Similarity=0.262 Sum_probs=31.3
Q ss_pred HHHHHHHHcCCcEEEeecCCC-c-------HHHHHHHHHHHhcCCc---eee
Q 018376 280 AIIRKLKDVGLHGLEVYRSDG-K-------LVDVNFLEKIDNFLLL---LCL 320 (357)
Q Consensus 280 ~li~~l~~~GlDGIEv~~~~~-~-------~~~~~~~~lA~~~~Ll---~t~ 320 (357)
+.++.++++|+||||+..... . .....+.++++++||- ++.
T Consensus 35 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~l~~~gL~~~~i~~ 86 (335)
T 2qw5_A 35 AHIKKLQRFGYSGFEFPIAPGLPENYAQDLENYTNLRHYLDSEGLENVKIST 86 (335)
T ss_dssp HHHHHHHHTTCCEEEEECCCCCGGGHHHHHHHHHHHHHHHHHTTCTTCEEEE
T ss_pred HHHHHHHHhCCCEEEEecCCCcccccccchHHHHHHHHHHHHCCCCcceeEE
Confidence 688889999999999986432 1 1224688999999998 764
No 84
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=45.80 E-value=42 Score=29.56 Aligned_cols=39 Identities=10% Similarity=0.074 Sum_probs=27.1
Q ss_pred hHHHHHHHHHcCCcEEEeecCCC--------cH-HHHHHHHHHHhcCC
Q 018376 278 PAAIIRKLKDVGLHGLEVYRSDG--------KL-VDVNFLEKIDNFLL 316 (357)
Q Consensus 278 ~~~li~~l~~~GlDGIEv~~~~~--------~~-~~~~~~~lA~~~~L 316 (357)
..+.++.+++.|+|+||++.... +. ....+.++++++||
T Consensus 16 ~~~~~~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl 63 (270)
T 3aam_A 16 VAGAVEEATALGLTAFQIFAKSPRSWRPRALSPAEVEAFRALREASGG 63 (270)
T ss_dssp HHHHHHHHHHHTCSCEEEESSCTTCCSCCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCcCcCCCCCHHHHHHHHHHHHHcCC
Confidence 35677888888999999965221 11 22467888889988
No 85
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=45.69 E-value=28 Score=31.67 Aligned_cols=41 Identities=10% Similarity=-0.032 Sum_probs=29.7
Q ss_pred HHHHHHHHcCCcEEEeecCCCc-H--------HHHHHHHHHHhcCCceee
Q 018376 280 AIIRKLKDVGLHGLEVYRSDGK-L--------VDVNFLEKIDNFLLLLCL 320 (357)
Q Consensus 280 ~li~~l~~~GlDGIEv~~~~~~-~--------~~~~~~~lA~~~~Ll~t~ 320 (357)
..+..++++|+||||++..... . ....+.++++++||-++.
T Consensus 39 ~~~~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~i~~ 88 (316)
T 3qxb_A 39 LAGLVRDDLGLEYVQYTYDLTDPWWPDIERDRRAIAYAKAFRKAGLTIES 88 (316)
T ss_dssp HHHHHHHTSCCCEEEEETTTSCTTSCHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHcCCCEEEeeccccCccccccchhhHHHHHHHHHHHcCCeEEE
Confidence 3456668999999999865321 1 224688999999998764
No 86
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3
Probab=45.62 E-value=17 Score=32.41 Aligned_cols=62 Identities=11% Similarity=0.095 Sum_probs=39.9
Q ss_pred eEEceeeeCcCCC---------CCCC---HHHHHHHHHHcCCcEEEEecCCCC-CCHHHHHHHHHhcCCeEEEEE
Q 018376 73 VVFELHSHSNFSD---------GYLS---PSKLVERAHCNGVKVLALTDHDTM-SGIPEAIETARRFGMKIIPGV 134 (357)
Q Consensus 73 ~~~DLH~HT~~SD---------G~~t---p~elv~~A~~~Gl~~iaITDHdt~-~g~~~~~~~a~~~gi~vi~Gi 134 (357)
..+|.|+|-.... ..-+ +.+.+++|.+.|+..+..+-++.. ..+..+.+.+++.++.+++++
T Consensus 6 G~iD~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~iv~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 80 (291)
T 1bf6_A 6 GYTLAHEHLHIDLSGFKNNVDCRLDQYAFICQEMNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGINVVACT 80 (291)
T ss_dssp SEEEEEECSSEECHHHHTCGGGEECCHHHHHHHHHHHHHTTEEEEEECCCGGGTCCHHHHHHHHHHHCCEEEEEE
T ss_pred ceeeeccCeecCCcccccCCCcccCCHHHHHHHHHHHHHcCCCEEEecCCCcCCCCHHHHHHHHHhcCCeEEEee
Confidence 6799999976321 1122 233667788999998766554323 236777777777776666554
No 87
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=44.59 E-value=29 Score=31.32 Aligned_cols=13 Identities=15% Similarity=0.140 Sum_probs=7.2
Q ss_pred CHHHHHHHHHHcC
Q 018376 252 LAEVAVQLIHRTG 264 (357)
Q Consensus 252 ~~eevI~~I~~aG 264 (357)
++++.++.++++|
T Consensus 37 ~~~~~l~~a~~~G 49 (296)
T 2g0w_A 37 SFPKRVKVAAENG 49 (296)
T ss_dssp CHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHcC
Confidence 4555555555555
No 88
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=43.57 E-value=32 Score=31.46 Aligned_cols=66 Identities=8% Similarity=0.130 Sum_probs=47.0
Q ss_pred HHHHHHHHHHcCCeEEeeCCC-----CCCChHHHHHHHHHcCCcEEEeecCCCc--HHH-HHHHHHHHhcCCce
Q 018376 253 AEVAVQLIHRTGGLAVLAHPW-----ALKNPAAIIRKLKDVGLHGLEVYRSDGK--LVD-VNFLEKIDNFLLLL 318 (357)
Q Consensus 253 ~eevI~~I~~aGGvaVLAHP~-----~~~~~~~li~~l~~~GlDGIEv~~~~~~--~~~-~~~~~lA~~~~Ll~ 318 (357)
+++.|++.|++|=-+..-..+ ....-++.+++.++.|+|.||+....-+ .+. .++.+.++++|+.+
T Consensus 57 l~eki~l~~~~gV~v~~GGTl~E~~~~qg~~~~yl~~~k~lGf~~iEiS~G~i~l~~~~~~~~I~~~~~~G~~v 130 (251)
T 1qwg_A 57 VKEKINYYKDWGIKVYPGGTLFEYAYSKGKFDEFLNECEKLGFEAVEISDGSSDISLEERNNAIKRAKDNGFMV 130 (251)
T ss_dssp HHHHHHHHHTTTCEEEECHHHHHHHHHTTCHHHHHHHHHHHTCCEEEECCSSSCCCHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHcCCeEECCcHHHHHHHHcCcHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHCCCEE
Confidence 678899998887443333211 0123477889999999999999987543 333 46889999999986
No 89
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=43.42 E-value=65 Score=28.17 Aligned_cols=64 Identities=20% Similarity=0.129 Sum_probs=47.4
Q ss_pred CCCCHHHHHHHHHHcCCeEEeeCCCCC---CChHHHHHHHHHc-CCcEEEeecCCCcHHHHHHHHHHHhcCCceee
Q 018376 249 SEPLAEVAVQLIHRTGGLAVLAHPWAL---KNPAAIIRKLKDV-GLHGLEVYRSDGKLVDVNFLEKIDNFLLLLCL 320 (357)
Q Consensus 249 ~~~~~eevI~~I~~aGGvaVLAHP~~~---~~~~~li~~l~~~-GlDGIEv~~~~~~~~~~~~~~lA~~~~Ll~t~ 320 (357)
+-..++++++.++++|=.+++ ||+.. ...+.-+..|++. +.|||=--.+ .....|++.||....
T Consensus 39 ~i~~l~~~v~~lk~~~K~v~V-h~Dli~Gls~d~~ai~fL~~~~~pdGIIsTk~-------~~i~~Ak~~gL~tIq 106 (192)
T 3kts_A 39 HVAQLKALVKYAQAGGKKVLL-HADLVNGLKNDDYAIDFLCTEICPDGIISTRG-------NAIMKAKQHKMLAIQ 106 (192)
T ss_dssp ETTTHHHHHHHHHHTTCEEEE-EGGGEETCCCSHHHHHHHHHTTCCSEEEESCH-------HHHHHHHHTTCEEEE
T ss_pred cHHHHHHHHHHHHHcCCeEEE-ecCchhccCCcHHHHHHHHhCCCCCEEEeCcH-------HHHHHHHHCCCeEEE
Confidence 446789999999999988877 99743 3445567777764 7888744332 378899999998754
No 90
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=41.94 E-value=53 Score=29.85 Aligned_cols=44 Identities=20% Similarity=0.191 Sum_probs=32.7
Q ss_pred ChHHHHHHHHHcCCcEEEeecC-CC-cH--------HHHHHHHHHHhcCCceee
Q 018376 277 NPAAIIRKLKDVGLHGLEVYRS-DG-KL--------VDVNFLEKIDNFLLLLCL 320 (357)
Q Consensus 277 ~~~~li~~l~~~GlDGIEv~~~-~~-~~--------~~~~~~~lA~~~~Ll~t~ 320 (357)
...+.++.++++|++|||+... .+ .. ....+.++++++||-++.
T Consensus 16 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~ 69 (340)
T 2zds_A 16 PLEEVCRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKCWA 69 (340)
T ss_dssp CHHHHHHHHHHHTCSEEEEESSTTTCCHHHHHHCTTHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHcCCCEEEeccccccCCccccccCHHHHHHHHHHHHHcCCeEEE
Confidence 3467889999999999999852 12 21 124688999999999864
No 91
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=41.61 E-value=30 Score=30.14 Aligned_cols=45 Identities=4% Similarity=-0.080 Sum_probs=35.3
Q ss_pred CCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcCCeEEE
Q 018376 87 YLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIP 132 (357)
Q Consensus 87 ~~tp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vi~ 132 (357)
..++++.++.+++.|++.|-+.-... ....++.+.+++.|+.+..
T Consensus 14 ~~~~~~~l~~~~~~G~~~vEl~~~~~-~~~~~~~~~l~~~gl~~~~ 58 (260)
T 1k77_A 14 EVPFIERFAAARKAGFDAVEFLFPYN-YSTLQIQKQLEQNHLTLAL 58 (260)
T ss_dssp TSCGGGHHHHHHHHTCSEEECSCCTT-SCHHHHHHHHHHTTCEEEE
T ss_pred CCCHHHHHHHHHHhCCCEEEecCCCC-CCHHHHHHHHHHcCCceEE
Confidence 57899999999999999999875322 2367788888889887653
No 92
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=41.32 E-value=14 Score=32.63 Aligned_cols=41 Identities=12% Similarity=0.007 Sum_probs=19.3
Q ss_pred HHHHHHHHHcCCcEEEeecCCC-----cHHHHHHHHHHHhcCCcee
Q 018376 279 AAIIRKLKDVGLHGLEVYRSDG-----KLVDVNFLEKIDNFLLLLC 319 (357)
Q Consensus 279 ~~li~~l~~~GlDGIEv~~~~~-----~~~~~~~~~lA~~~~Ll~t 319 (357)
.+.++.++++|+||||++.... ......+.++++++||-++
T Consensus 19 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~~~ 64 (281)
T 3u0h_A 19 VLYLDLARETGYRYVDVPFHWLEAEAERHGDAAVEAMFQRRGLVLA 64 (281)
T ss_dssp HHHHHHHHHTTCSEECCCHHHHHHHHHHHCHHHHHHHHHTTTCEEC
T ss_pred HHHHHHHHHcCCCEEEecHHHHHHHhcccCHHHHHHHHHHcCCceE
Confidence 4455555555556665554321 0011235555555555543
No 93
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=40.74 E-value=95 Score=28.72 Aligned_cols=65 Identities=11% Similarity=0.024 Sum_probs=43.6
Q ss_pred HHHHHHHHc--CCeEEeeCCCCCCC--hHHHHHHHHHcCCcEEEeecCCCc-----HHH--HHHHHHHHhcCCcee
Q 018376 255 VAVQLIHRT--GGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDGK-----LVD--VNFLEKIDNFLLLLC 319 (357)
Q Consensus 255 evI~~I~~a--GGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~~-----~~~--~~~~~lA~~~~Ll~t 319 (357)
++++.+.++ |.++|+|+-+.... .-++.+.+.+.|.||+=+..|+.. ++. +.+..+|+.-+|.+.
T Consensus 71 ~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a~~lPii 146 (307)
T 3s5o_A 71 EVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLSPIPVV 146 (307)
T ss_dssp HHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHHHCSSCEE
T ss_pred HHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhhcCCCEE
Confidence 355555443 67899999875332 134556778899999999887642 222 467888888777653
No 94
>2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical ST genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A
Probab=40.51 E-value=17 Score=34.83 Aligned_cols=28 Identities=25% Similarity=0.210 Sum_probs=25.2
Q ss_pred eEEceeeeCcCCCCCCCHHHHHHHHHHcCCc
Q 018376 73 VVFELHSHSNFSDGYLSPSKLVERAHCNGVK 103 (357)
Q Consensus 73 ~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~ 103 (357)
.+++||+|- ||+++|+.+++.|+++|++
T Consensus 45 PK~eLH~Hl---~gsl~~~~l~~la~~~~~~ 72 (371)
T 2pgf_A 45 PKCELHCHL---DLCFSADFFVSCIRKYNLQ 72 (371)
T ss_dssp CEEEEEEEG---GGCCCHHHHHHHHHHTTCC
T ss_pred cHhhheeCC---ccCCCHHHHHHHHHHcCCC
Confidence 478999997 8999999999999999974
No 95
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=40.44 E-value=35 Score=30.42 Aligned_cols=59 Identities=12% Similarity=0.018 Sum_probs=40.2
Q ss_pred EEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCC--C--CCHHHHHHHHHhcCCeEEE
Q 018376 74 VFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDT--M--SGIPEAIETARRFGMKIIP 132 (357)
Q Consensus 74 ~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~iaITDHdt--~--~g~~~~~~~a~~~gi~vi~ 132 (357)
++-+|+.+...+-..++++.++.+++.|+++|-+...+- + ....++.+.+++.|+.+..
T Consensus 3 kigi~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~i~~ 65 (294)
T 3vni_A 3 KHGIYYAYWEQEWEADYKYYIEKVAKLGFDILEIAASPLPFYSDIQINELKACAHGNGITLTV 65 (294)
T ss_dssp CEEEEGGGGCSSSCCCHHHHHHHHHHHTCSEEEEESTTGGGCCHHHHHHHHHHHHHTTCEEEE
T ss_pred eEEEehhhhcCCcCcCHHHHHHHHHHcCCCEEEecCcccCCcCHHHHHHHHHHHHHcCCeEEE
Confidence 344444443333335899999999999999999985431 1 1245677778889987654
No 96
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=40.07 E-value=53 Score=29.32 Aligned_cols=62 Identities=11% Similarity=0.163 Sum_probs=42.2
Q ss_pred HHHHHHHHcCCeEEeeCCCCCCChHHHHHHHHHcCCcEEEeecCC-CcHHHHHHHHHHHhcCCce
Q 018376 255 VAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSD-GKLVDVNFLEKIDNFLLLL 318 (357)
Q Consensus 255 evI~~I~~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~-~~~~~~~~~~lA~~~~Ll~ 318 (357)
.+|+.|++.=..++.+|-.- .++...++.++++|.|+|-+..-. .. .-..+.+.++++|...
T Consensus 47 ~~v~~lr~~~~~~~dvhLmv-~dp~~~i~~~~~aGAd~itvh~Ea~~~-~~~~~i~~i~~~G~k~ 109 (231)
T 3ctl_A 47 FFVSQVKKLATKPLDCHLMV-TRPQDYIAQLARAGADFITLHPETING-QAFRLIDEIRRHDMKV 109 (231)
T ss_dssp HHHHHHHTTCCSCEEEEEES-SCGGGTHHHHHHHTCSEEEECGGGCTT-THHHHHHHHHHTTCEE
T ss_pred HHHHHHHhccCCcEEEEEEe-cCHHHHHHHHHHcCCCEEEECcccCCc-cHHHHHHHHHHcCCeE
Confidence 57888887656778888643 245566788888898888776533 21 1235778888888764
No 97
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=39.51 E-value=61 Score=29.16 Aligned_cols=39 Identities=10% Similarity=0.034 Sum_probs=28.6
Q ss_pred hHHHHHHHHHcCCcEEEeecCCC---------cHHHHHHHHHHHhcCC
Q 018376 278 PAAIIRKLKDVGLHGLEVYRSDG---------KLVDVNFLEKIDNFLL 316 (357)
Q Consensus 278 ~~~li~~l~~~GlDGIEv~~~~~---------~~~~~~~~~lA~~~~L 316 (357)
..+.++.++++|+||||++.... ......+.++++++||
T Consensus 20 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl 67 (303)
T 3aal_A 20 LLAASEEAASYGANTFMIYTGAPQNTKRKSIEELNIEAGRQHMQAHGI 67 (303)
T ss_dssp HHHHHHHHHHTTCSEEEEESSCTTCCCCCCSGGGCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCCccCCCCCCHHHHHHHHHHHHHcCC
Confidence 46778889999999999954211 1122468899999999
No 98
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=39.50 E-value=74 Score=27.68 Aligned_cols=46 Identities=13% Similarity=0.134 Sum_probs=35.5
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEecCC------CCCCHHHHHHHHHhcCCeEE
Q 018376 86 GYLSPSKLVERAHCNGVKVLALTDHD------TMSGIPEAIETARRFGMKII 131 (357)
Q Consensus 86 G~~tp~elv~~A~~~Gl~~iaITDHd------t~~g~~~~~~~a~~~gi~vi 131 (357)
+..++++.++.+++.|++.|-+.... .-....++.+++++.|+.+.
T Consensus 17 ~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~ 68 (272)
T 2q02_A 17 PGLSIEAFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEIV 68 (272)
T ss_dssp TTSCHHHHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEEE
T ss_pred CCCCHHHHHHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCeEE
Confidence 35789999999999999999997421 12356778888888888643
No 99
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=39.32 E-value=26 Score=31.81 Aligned_cols=42 Identities=14% Similarity=0.137 Sum_probs=30.9
Q ss_pred hHHHHHHHHHcCCcEEEeecCC-Cc---HHHHHHHHHHHhcCCceee
Q 018376 278 PAAIIRKLKDVGLHGLEVYRSD-GK---LVDVNFLEKIDNFLLLLCL 320 (357)
Q Consensus 278 ~~~li~~l~~~GlDGIEv~~~~-~~---~~~~~~~~lA~~~~Ll~t~ 320 (357)
..+ ++.++++|+||||++... .. .....+.++++++||-++.
T Consensus 39 l~~-l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~l~~~gl~i~~ 84 (309)
T 2hk0_A 39 GPY-IEKVAKLGFDIIEVAAHHINEYSDAELATIRKSAKDNGIILTA 84 (309)
T ss_dssp HHH-HHHHHHTTCSEEEEEHHHHTTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHH-HHHHHHhCCCEEEeccCCccccchhhHHHHHHHHHHcCCeEEE
Confidence 356 888899999999997631 11 2234688999999998764
No 100
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=39.17 E-value=69 Score=29.74 Aligned_cols=57 Identities=11% Similarity=0.049 Sum_probs=39.2
Q ss_pred cCCeEEeeCCCCCCC--hHHHHHHHHHcCCcEEEeecCCC------cHHH--HHHHHHHHhcCCcee
Q 018376 263 TGGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDG------KLVD--VNFLEKIDNFLLLLC 319 (357)
Q Consensus 263 aGGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~------~~~~--~~~~~lA~~~~Ll~t 319 (357)
.|.++|+|+-+.... .-++.+.+.+.|.||+=+..|+. +++. +.|..+|+.-++.+.
T Consensus 75 ~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a~~lPii 141 (309)
T 3fkr_A 75 AGRVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAIAIPIM 141 (309)
T ss_dssp TTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHHCSSCEE
T ss_pred CCCCcEEEecCCchHHHHHHHHHHHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHhcCCCEE
Confidence 466899999875432 23455677888999999987764 2222 467888888777653
No 101
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=38.02 E-value=38 Score=30.94 Aligned_cols=14 Identities=7% Similarity=0.033 Sum_probs=9.1
Q ss_pred CHHHHHHHHHHcCC
Q 018376 252 LAEVAVQLIHRTGG 265 (357)
Q Consensus 252 ~~eevI~~I~~aGG 265 (357)
+++++++.++++|-
T Consensus 37 ~l~~~l~~aa~~G~ 50 (305)
T 3obe_A 37 DMPNGLNRLAKAGY 50 (305)
T ss_dssp THHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHcCC
Confidence 45667777777663
No 102
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=37.29 E-value=61 Score=30.14 Aligned_cols=64 Identities=13% Similarity=0.044 Sum_probs=42.6
Q ss_pred HHHHHH-HcCCeEEeeCCCCCCC--hHHHHHHHHHcCCcEEEeecCCCc--HHH--HHHHHHHHhcC--Ccee
Q 018376 256 AVQLIH-RTGGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDGK--LVD--VNFLEKIDNFL--LLLC 319 (357)
Q Consensus 256 vI~~I~-~aGGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~~--~~~--~~~~~lA~~~~--Ll~t 319 (357)
+++.+. .+|.++|+|+-+.... .-++.+.+.+.|.||+=+..|+.. ++. +.|..+|+.-+ |.+.
T Consensus 66 v~~~~v~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~~~~s~~~l~~~f~~va~a~~~~lPii 138 (313)
T 3dz1_A 66 VATRFIKRAKSMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMIAPPPSLRTDEQITTYFRQATEAIGDDVPWV 138 (313)
T ss_dssp HHHHHHHHCTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCTTCCSHHHHHHHHHHHHHHHCTTSCEE
T ss_pred HHHHHHHHcCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHhCCCCCcEE
Confidence 444433 3378999999875332 234556678889999999888753 222 46888888876 6653
No 103
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=37.23 E-value=69 Score=27.17 Aligned_cols=20 Identities=15% Similarity=0.150 Sum_probs=10.0
Q ss_pred HHHHHHHHHcCCeEEeeCCC
Q 018376 254 EVAVQLIHRTGGLAVLAHPW 273 (357)
Q Consensus 254 eevI~~I~~aGGvaVLAHP~ 273 (357)
+..++.+.++|.=.|.-|+.
T Consensus 67 ~~~~~~a~~~Gad~v~vh~~ 86 (207)
T 3ajx_A 67 ELEADIAFKAGADLVTVLGS 86 (207)
T ss_dssp HHHHHHHHHTTCSEEEEETT
T ss_pred HHHHHHHHhCCCCEEEEecc
Confidence 33445555555544555554
No 104
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=37.01 E-value=21 Score=31.56 Aligned_cols=12 Identities=8% Similarity=-0.142 Sum_probs=6.8
Q ss_pred HHHHHHHhcCCc
Q 018376 306 NFLEKIDNFLLL 317 (357)
Q Consensus 306 ~~~~lA~~~~Ll 317 (357)
...++|.++|.-
T Consensus 88 ~~i~~A~~lGa~ 99 (264)
T 1yx1_A 88 PTLRRAEACGAG 99 (264)
T ss_dssp HHHHHHHHTTCS
T ss_pred HHHHHHHHcCCC
Confidence 455666666644
No 105
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=36.90 E-value=79 Score=27.57 Aligned_cols=62 Identities=11% Similarity=0.071 Sum_probs=46.2
Q ss_pred CCHHHHHHHHHHcCCeEEeeCCCCC---CChHHHHHHHHHcCCcEEEeecCCCcHHHHHHHHHHHhcCCceee
Q 018376 251 PLAEVAVQLIHRTGGLAVLAHPWAL---KNPAAIIRKLKDVGLHGLEVYRSDGKLVDVNFLEKIDNFLLLLCL 320 (357)
Q Consensus 251 ~~~eevI~~I~~aGGvaVLAHP~~~---~~~~~li~~l~~~GlDGIEv~~~~~~~~~~~~~~lA~~~~Ll~t~ 320 (357)
..+.++++.++++ |..|+-||+.. ...+.-+..|...+.|||=--.+ .....|+++||....
T Consensus 43 ~~L~~iv~~ik~~-gK~vivh~DlI~GLs~d~~ai~fL~~~~pdGIIsTk~-------~~i~~Akk~GL~tIq 107 (188)
T 1vkf_A 43 LNLKFHLKILKDR-GKTVFVDMDFVNGLGEGEEAILFVKKAGADGIITIKP-------KNYVVAKKNGIPAVL 107 (188)
T ss_dssp TTHHHHHHHHHHT-TCEEEEEGGGEETCCSSHHHHHHHHHHTCSEEEESCH-------HHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHC-CCeEEEecCcccccCCCHHHHHHHHhcCCCEEEcCcH-------HHHHHHHHcCCEEee
Confidence 4589999999999 89999999743 33345566666668888754332 378899999998754
No 106
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=36.77 E-value=77 Score=27.58 Aligned_cols=45 Identities=9% Similarity=0.039 Sum_probs=35.6
Q ss_pred CCCHHHHHHHHHHcCCcEEEEe-cCC-----CCCCHHHHHHHHHhcCCeEE
Q 018376 87 YLSPSKLVERAHCNGVKVLALT-DHD-----TMSGIPEAIETARRFGMKII 131 (357)
Q Consensus 87 ~~tp~elv~~A~~~Gl~~iaIT-DHd-----t~~g~~~~~~~a~~~gi~vi 131 (357)
..++++.++.+++.|++.|-+. -.+ .-....++.+.+++.|+.+.
T Consensus 13 ~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~ 63 (278)
T 1i60_A 13 NSNLKLDLELCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTHHIKPL 63 (278)
T ss_dssp TCCHHHHHHHHHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTSSCEEE
T ss_pred CCCHHHHHHHHHHhCCCEEEEccHHHHHHHhccCCHHHHHHHHHHcCCCee
Confidence 4789999999999999999998 432 22456778888888988754
No 107
>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A*
Probab=36.07 E-value=80 Score=29.80 Aligned_cols=61 Identities=20% Similarity=0.216 Sum_probs=40.0
Q ss_pred eEEceeeeCcCC--CC---------------------CCCHHH-------HHHHHHHcCCcEEEEecCCCCCCHHHHHHH
Q 018376 73 VVFELHSHSNFS--DG---------------------YLSPSK-------LVERAHCNGVKVLALTDHDTMSGIPEAIET 122 (357)
Q Consensus 73 ~~~DLH~HT~~S--DG---------------------~~tp~e-------lv~~A~~~Gl~~iaITDHdt~~g~~~~~~~ 122 (357)
-+||.|+|...+ .| .+++++ .+.++.+.|+..+. |+ ......+.+.
T Consensus 65 GlID~H~Hl~~~~~~g~~~~~~~~~wl~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~--d~--~~~~~~~~~~ 140 (447)
T 4f0r_A 65 GLINLHGHSAMSLLRGLADDKALMDWLTNYIWPTEGKHVHDDFVFDGSLLAMGEMIRGGTTTIN--DM--YFYNAAVARA 140 (447)
T ss_dssp CEEEEEECGGGGGGTTSSCSSCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEE--EC--BSCHHHHHHH
T ss_pred CccchhhChhhHhhccCCCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEE--Ec--ccCHHHHHHH
Confidence 589999999543 22 256665 34556778987765 43 2234556677
Q ss_pred HHhcCCeEEEEEEEE
Q 018376 123 ARRFGMKIIPGVEIS 137 (357)
Q Consensus 123 a~~~gi~vi~GiEis 137 (357)
+.+.|++.+.+..+.
T Consensus 141 ~~~~g~r~~~~~~~~ 155 (447)
T 4f0r_A 141 GLASGMRTFVGCSIL 155 (447)
T ss_dssp HHHHTCEEEEEEEEC
T ss_pred HHHcCCeEEEEchhc
Confidence 778888887776654
No 108
>2wvv_A Alpha-L-fucosidase; alpha-L-fucose, hydrolase, glycoside hydrolase family 29; 1.73A {Bacteroides thetaiotaomicron} PDB: 2xii_A* 2xib_A* 2wvv_B 2wvt_A* 2wvu_A* 2wvs_A*
Probab=35.72 E-value=42 Score=33.18 Aligned_cols=54 Identities=15% Similarity=0.169 Sum_probs=39.9
Q ss_pred CCCCCCCHHHHHHHHHHcCCcEEEEe---------------cCCCCC------CHHHHHHHHHhcCCeEEEEEEEEe
Q 018376 83 FSDGYLSPSKLVERAHCNGVKVLALT---------------DHDTMS------GIPEAIETARRFGMKIIPGVEIST 138 (357)
Q Consensus 83 ~SDG~~tp~elv~~A~~~Gl~~iaIT---------------DHdt~~------g~~~~~~~a~~~gi~vi~GiEis~ 138 (357)
|.--.+.|++.++.|++.|++.+.+| ||+.+. =+.++.++|++.||++ |+=+|.
T Consensus 73 F~p~~fDp~~Wa~~~k~AGakyvvlTaKHHDGF~lwpSk~t~~n~~~~~~krDlv~el~~A~rk~Glk~--GlY~S~ 147 (450)
T 2wvv_A 73 WNPTKFDAKKWAKMAKEMGTKYVKITTKHHEGFCLWPSKYTKYTVANTPYKRDILGELVKAYNDEGIDV--HFYFSV 147 (450)
T ss_dssp CCCTTCCHHHHHHHHHHHTCSEEEEEEECTTCCBSSCCTTCSCBGGGSTTCSCHHHHHHHHHHHTTCEE--EEEEES
T ss_pred CCcccCCHHHHHHHHHHcCCcEEEEEEeecCCccccCCCCCCCccccCCCCCChHHHHHHHHHHcCCeE--EEEecH
Confidence 33346899999999999999999987 443331 1567888999998764 555654
No 109
>4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa}
Probab=35.62 E-value=53 Score=31.16 Aligned_cols=61 Identities=15% Similarity=0.212 Sum_probs=39.6
Q ss_pred eEEceeeeCcCC--CC---------------------CCCHHHH-------HHHHHHcCCcEEEEecCCCCCCHHHHHHH
Q 018376 73 VVFELHSHSNFS--DG---------------------YLSPSKL-------VERAHCNGVKVLALTDHDTMSGIPEAIET 122 (357)
Q Consensus 73 ~~~DLH~HT~~S--DG---------------------~~tp~el-------v~~A~~~Gl~~iaITDHdt~~g~~~~~~~ 122 (357)
-+||.|+|...+ .| .++++++ +..+.+.|+..+. |+. .....+.+.
T Consensus 67 G~ID~H~H~~~~~~~g~~~~~~l~~wl~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~--d~~--~~~~~~~~a 142 (451)
T 4dyk_A 67 GLVNAHGHSAMSLFRGLADDLPLMTWLQDHIWPAEGQWVSEDFIRDGTELAIAEQVKGGITCFS--DMY--FYPQAICGV 142 (451)
T ss_dssp CEEECCCCGGGGGGTTSSCSSCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEE--EEC--SCHHHHHHH
T ss_pred cccchhhChhhHHhccCCCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEE--Ecc--cCHHHHHHH
Confidence 589999999544 22 2566643 4445588977664 552 233556677
Q ss_pred HHhcCCeEEEEEEEE
Q 018376 123 ARRFGMKIIPGVEIS 137 (357)
Q Consensus 123 a~~~gi~vi~GiEis 137 (357)
+.+.|++.+.+..+.
T Consensus 143 ~~~~g~r~~~~~~~~ 157 (451)
T 4dyk_A 143 VHDSGVRAQVAIPVL 157 (451)
T ss_dssp HHHHTCEEEEEEEEC
T ss_pred HHHcCCeEEEEchhh
Confidence 778898888777664
No 110
>3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica}
Probab=35.08 E-value=80 Score=30.08 Aligned_cols=61 Identities=16% Similarity=0.125 Sum_probs=39.8
Q ss_pred eEEceeeeCcCC--CC---------------------CCCHHHH-------HHHHHHcCCcEEEEecCCCCCCHHHHHHH
Q 018376 73 VVFELHSHSNFS--DG---------------------YLSPSKL-------VERAHCNGVKVLALTDHDTMSGIPEAIET 122 (357)
Q Consensus 73 ~~~DLH~HT~~S--DG---------------------~~tp~el-------v~~A~~~Gl~~iaITDHdt~~g~~~~~~~ 122 (357)
-+||.|+|...+ .| .++++++ +..+.+.|+..+. |+. .....+.+.
T Consensus 87 GlID~H~H~~~~~~~g~~~~~~l~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~--d~~--~~~~~~~~~ 162 (468)
T 3lnp_A 87 GWVNAHGHAAMSLFRGLADDLPLMTWLQEHVWPAEAQHVDEHFVKQGTELAIAEMIQSGTTTFA--DMY--FYPQQSGEA 162 (468)
T ss_dssp CEEECSCCGGGGGGTTSSCSCCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEE--ECC--SCHHHHHHH
T ss_pred CeechhhChhhhhhccCcCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEE--Ecc--cCHHHHHHH
Confidence 489999999543 22 2666654 4456788977654 552 223556677
Q ss_pred HHhcCCeEEEEEEEE
Q 018376 123 ARRFGMKIIPGVEIS 137 (357)
Q Consensus 123 a~~~gi~vi~GiEis 137 (357)
+.+.|++.+.+..+.
T Consensus 163 ~~~~g~r~~~~~~~~ 177 (468)
T 3lnp_A 163 ALAAGIRAVCFAPVL 177 (468)
T ss_dssp HHHHTCEEEEEEEEC
T ss_pred HHHcCCeEEEecccc
Confidence 778898887776654
No 111
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=35.05 E-value=27 Score=31.46 Aligned_cols=36 Identities=14% Similarity=0.146 Sum_probs=28.2
Q ss_pred eEEceeeeCcCCC------------------CCCCHHHHHHHHHHcCCcEEEEe
Q 018376 73 VVFELHSHSNFSD------------------GYLSPSKLVERAHCNGVKVLALT 108 (357)
Q Consensus 73 ~~~DLH~HT~~SD------------------G~~tp~elv~~A~~~Gl~~iaIT 108 (357)
+.||.|+|-...+ ...+++++++.+.+.|++...++
T Consensus 2 ~~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~m~~~GV~~~v~~ 55 (307)
T 2f6k_A 2 SKIDFHTHYLPTSYVEALKRHVPGDPDGWPTPEWTPQLTLNFMRDNDISYSILS 55 (307)
T ss_dssp CEEEEEEECCCHHHHHHHHHHCCSSGGGSCCCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred CeEEEecCcCCHHHHHHHHHhccCCcccCcCCCCCHHHHHHHHHHcCCCEEEEe
Confidence 4799999964321 23789999999999999987665
No 112
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=35.00 E-value=1.2e+02 Score=27.64 Aligned_cols=57 Identities=14% Similarity=0.066 Sum_probs=38.9
Q ss_pred cCCeEEeeCCCCCCC--hHHHHHHHHHcCCcEEEeecCCC---cHHH--HHHHHHHHhcCCcee
Q 018376 263 TGGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDG---KLVD--VNFLEKIDNFLLLLC 319 (357)
Q Consensus 263 aGGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~---~~~~--~~~~~lA~~~~Ll~t 319 (357)
.|.++|+|+-+.... .-++.+.+.+.|.||+=+..|+. +++. +.+.++|+.-++.+.
T Consensus 67 ~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPii 130 (289)
T 2yxg_A 67 NGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITPYYNKPTQEGLRKHFGKVAESINLPIV 130 (289)
T ss_dssp TTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEE
T ss_pred CCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEE
Confidence 355999999876432 13455667788999999988765 2222 467888888777653
No 113
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=34.98 E-value=1e+02 Score=28.52 Aligned_cols=57 Identities=19% Similarity=0.131 Sum_probs=40.5
Q ss_pred cCCeEEeeCCCCCCC--hHHHHHHHHHcCCcEEEeecCCC-c--HHH--HHHHHHHHhcCCcee
Q 018376 263 TGGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDG-K--LVD--VNFLEKIDNFLLLLC 319 (357)
Q Consensus 263 aGGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~-~--~~~--~~~~~lA~~~~Ll~t 319 (357)
.|.++|+|+-+.... .-++.+.+.+.|.||+=+..|+. . ++. +.+.++|+.-++.+.
T Consensus 82 ~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPii 145 (304)
T 3l21_A 82 GDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADATELPML 145 (304)
T ss_dssp TTTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTSCSSCEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEE
Confidence 467999999875432 23456677889999999988874 2 222 468889998777653
No 114
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=34.90 E-value=1.4e+02 Score=27.29 Aligned_cols=56 Identities=16% Similarity=0.119 Sum_probs=38.1
Q ss_pred cCCeEEeeCCCCCCCh--HHHHHHHHHcCCcEEEeecCCC---cHHH--HHHHHHHHhcCCce
Q 018376 263 TGGLAVLAHPWALKNP--AAIIRKLKDVGLHGLEVYRSDG---KLVD--VNFLEKIDNFLLLL 318 (357)
Q Consensus 263 aGGvaVLAHP~~~~~~--~~li~~l~~~GlDGIEv~~~~~---~~~~--~~~~~lA~~~~Ll~ 318 (357)
.|.++|+|+-+..... -++.+.+.+.|.||+=+..|+. +++. +.+..+|+.-+|.+
T Consensus 67 ~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPi 129 (294)
T 2ehh_A 67 AGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVVPYYNKPTQRGLYEHFKTVAQEVDIPI 129 (294)
T ss_dssp TTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCE
T ss_pred CCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCE
Confidence 3458999998764321 3455667788999999988765 2222 46778888877765
No 115
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=34.60 E-value=46 Score=31.59 Aligned_cols=44 Identities=20% Similarity=0.381 Sum_probs=32.9
Q ss_pred ChHHHHHHHHHcCCcEEEee----cCCCc------HHHHHHHHHHHhcCCceee
Q 018376 277 NPAAIIRKLKDVGLHGLEVY----RSDGK------LVDVNFLEKIDNFLLLLCL 320 (357)
Q Consensus 277 ~~~~li~~l~~~GlDGIEv~----~~~~~------~~~~~~~~lA~~~~Ll~t~ 320 (357)
...+.++.++++|++|||+. .+... .....+.++++++||-++.
T Consensus 34 ~~~e~l~~aa~~G~~~vEl~~~~~~p~~~~~~e~~~~~~~l~~~l~~~GL~i~~ 87 (387)
T 1bxb_A 34 DPVYVVHKLAELGAYGVNLHDEDLIPRGTPPQERDQIVRRFKKALDETGLKVPM 87 (387)
T ss_dssp CHHHHHHHHHHHTCSEEEEEHHHHSCTTCCTTHHHHHHHHHHHHHHHHTCBCCE
T ss_pred CHHHHHHHHHHhCCCEEEecCcccCCCCCChhhhHHHHHHHHHHHHHhCCEEEE
Confidence 44678888999999999998 55432 1224688999999998753
No 116
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=34.48 E-value=1.2e+02 Score=27.93 Aligned_cols=57 Identities=11% Similarity=-0.027 Sum_probs=40.4
Q ss_pred cCCeEEeeCCCCCCC--hHHHHHHHHHcCCcEEEeecCCC---cHHH--HHHHHHHHhcCCcee
Q 018376 263 TGGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDG---KLVD--VNFLEKIDNFLLLLC 319 (357)
Q Consensus 263 aGGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~---~~~~--~~~~~lA~~~~Ll~t 319 (357)
.|.++|+||-+.... .-++.+.+.+.|.||+=+..|+. +++. .++..+|+.-+|.+.
T Consensus 74 ~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPii 137 (297)
T 3flu_A 74 AKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEATSIPMI 137 (297)
T ss_dssp TTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEE
T ss_pred CCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEE
Confidence 366899999875432 23456677889999999988764 2222 468889998777653
No 117
>3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A
Probab=34.43 E-value=79 Score=29.84 Aligned_cols=48 Identities=13% Similarity=0.181 Sum_probs=41.1
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcCCeEEEEEEEE
Q 018376 85 DGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVEIS 137 (357)
Q Consensus 85 DG~~tp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vi~GiEis 137 (357)
|-..+|+++++..+.+|++.|=|-|-| +.+.++++..||+++.|+-.+
T Consensus 12 ~nlp~p~~Vv~llks~gi~~VRlY~~D-----~~vL~Al~~sgi~V~lGV~n~ 59 (323)
T 3ur8_A 12 NNLPSDQDVIKLYNANNIKKMRIYYPH-----TNVFNALKGSNIEIILDVPNQ 59 (323)
T ss_dssp SSCCCHHHHHHHHHHTTCCEEEESSCC-----HHHHHHHTTCCCEEEEEECGG
T ss_pred CCCCCHHHHHHHHHhCCCCeEEecCCC-----HHHHHHHHhcCCeEEEecccc
Confidence 445789999999999999999998876 677788888999999999753
No 118
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=34.33 E-value=52 Score=29.07 Aligned_cols=45 Identities=11% Similarity=0.147 Sum_probs=35.0
Q ss_pred CCHHHHHHHHHHcCCcEEEEecCCCC----CCHHHHHHHHHhcCCeEEE
Q 018376 88 LSPSKLVERAHCNGVKVLALTDHDTM----SGIPEAIETARRFGMKIIP 132 (357)
Q Consensus 88 ~tp~elv~~A~~~Gl~~iaITDHdt~----~g~~~~~~~a~~~gi~vi~ 132 (357)
.++++.++.+++.|++.|-|.-.+.. ....++.+.+++.|+.+..
T Consensus 17 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~ 65 (290)
T 2qul_A 17 VDFPATAKRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLGLTVMC 65 (290)
T ss_dssp CCHHHHHHHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHTCEEEE
T ss_pred ccHHHHHHHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcCCceEE
Confidence 58999999999999999999865432 2345677778888887654
No 119
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=34.28 E-value=1.3e+02 Score=27.60 Aligned_cols=55 Identities=11% Similarity=0.043 Sum_probs=39.3
Q ss_pred CeEEeeCCCCCCC--hHHHHHHHHHcCCcEEEeecCCC---cHHH--HHHHHHHHhcCCcee
Q 018376 265 GLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDG---KLVD--VNFLEKIDNFLLLLC 319 (357)
Q Consensus 265 GvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~---~~~~--~~~~~lA~~~~Ll~t 319 (357)
.++|+|+-+.... .-++.+.+.+.|.||+=+..|+. +++. +.+.++|+.-+|.+.
T Consensus 77 rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPii 138 (301)
T 3m5v_A 77 KVKVLAGAGSNATHEAVGLAKFAKEHGADGILSVAPYYNKPTQQGLYEHYKAIAQSVDIPVL 138 (301)
T ss_dssp SCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEE
T ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEE
Confidence 4999999875332 23456677889999999988865 2222 468889998887653
No 120
>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} SCOP: c.1.15.3 PDB: 4xim_A 5xim_A* 6xim_A* 7xim_A 8xim_A* 9xim_A* 3xin_A 2xim_A* 5xin_A* 1xin_A* 1bhw_A* 2xin_A* 3xim_A*
Probab=34.12 E-value=42 Score=31.96 Aligned_cols=44 Identities=20% Similarity=0.365 Sum_probs=33.0
Q ss_pred ChHHHHHHHHHcCCcEEEee----cCCCc-----H-HHHHHHHHHHhcCCceee
Q 018376 277 NPAAIIRKLKDVGLHGLEVY----RSDGK-----L-VDVNFLEKIDNFLLLLCL 320 (357)
Q Consensus 277 ~~~~li~~l~~~GlDGIEv~----~~~~~-----~-~~~~~~~lA~~~~Ll~t~ 320 (357)
...+.++.++++|++|||+. .+... . ....+.++++++||-++.
T Consensus 34 ~~~e~l~~aa~~G~~~VEl~~~~l~p~~~~~~~~~~~~~~l~~~l~~~GL~i~~ 87 (393)
T 1xim_A 34 DPVEAVHKLAEIGAYGITFHDDDLVPFGSDAQTRDGIIAGFKKALDETGLIVPM 87 (393)
T ss_dssp CHHHHHHHHHHHTCSEEECBHHHHSCTTCCHHHHHHHHHHHHHHHHHHTCBCCE
T ss_pred CHHHHHHHHHHhCCCEEEeecccCCCccccccccHHHHHHHHHHHHHhCCEEEE
Confidence 34678888899999999998 55442 1 224688999999998753
No 121
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=33.84 E-value=50 Score=26.27 Aligned_cols=40 Identities=15% Similarity=0.183 Sum_probs=31.4
Q ss_pred CCCCHHHHhHHHHHhhhhccCCCCCCCCCCCccccccccccCCCCceEEceeeeCcCCCCCCCHHHHHHHHHHcCC
Q 018376 27 KKMTAEQSLAFNSVTEWVYLDQSHSSSSSEDDFGVHQILNRAVDNNVVFELHSHSNFSDGYLSPSKLVERAHCNGV 102 (357)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl 102 (357)
..+|.++...|+.++..++.+ .||.++.+++.......|.
T Consensus 17 ~~l~~~~~~~l~~~F~~~D~d------------------------------------~~G~i~~~el~~~l~~~g~ 56 (166)
T 2mys_B 17 SMFDETEIEDFKEAFTVIDQN------------------------------------ADGIIDKDDLRETFAAMGR 56 (166)
T ss_pred hhCCHHHHHHHHHHHHHHCCC------------------------------------CCCcCCHHHHHHHHHHhCC
Confidence 477888988899888876433 2678999999888888775
No 122
>3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A
Probab=33.63 E-value=15 Score=37.59 Aligned_cols=59 Identities=15% Similarity=0.271 Sum_probs=40.8
Q ss_pred eEEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCC------CCCHHHHHHHHHhcCCeEEEEE
Q 018376 73 VVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDT------MSGIPEAIETARRFGMKIIPGV 134 (357)
Q Consensus 73 ~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~iaITDHdt------~~g~~~~~~~a~~~gi~vi~Gi 134 (357)
-.+|.|+|... +.++++++.+.|...|+..+.. |.++ ..++..+.+.+++.++.++..+
T Consensus 90 G~ID~H~Hl~~--~~~~~~~~~~~al~~GvTtvv~-~p~~~~~v~g~~~~~~~l~~a~~~~~~v~~~~ 154 (608)
T 3nqb_A 90 GLIDTHMHIES--SMITPAAYAAAVVARGVTTIVW-DPHEFGNVHGVDGVRWAAKAIENLPLRAILLA 154 (608)
T ss_dssp CEEEEEECGGG--GTSCHHHHHHHHHTTTEEEEEE-CCHHHHHHHTHHHHHHHHHHHTTCSSEEEEEE
T ss_pred CeEecccCccc--ccCCHHHHHHHHHhCCeEEEEc-CCccccccCCHHHHHHHHHHhhhcCcEEEEec
Confidence 48999999864 3469999999999999988654 4433 2334455566666666655443
No 123
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=33.45 E-value=1.5e+02 Score=27.29 Aligned_cols=64 Identities=11% Similarity=0.090 Sum_probs=42.8
Q ss_pred HHHHHHH--cCCeEEeeCCCCCCC--hHHHHHHHHHcCCcEEEeecCCC---cHHH--HHHHHHHHhcCCcee
Q 018376 256 AVQLIHR--TGGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDG---KLVD--VNFLEKIDNFLLLLC 319 (357)
Q Consensus 256 vI~~I~~--aGGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~---~~~~--~~~~~lA~~~~Ll~t 319 (357)
+++.+.+ .|.++|+|+-+.... .-++.+.+.+.|.||+=+..|+. +++. +.+..+|+.-+|.+.
T Consensus 74 v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPii 146 (304)
T 3cpr_A 74 LLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAATEVPIC 146 (304)
T ss_dssp HHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEE
T ss_pred HHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEE
Confidence 4444332 355999999876432 13456667889999999988865 2222 467889998887653
No 124
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=33.38 E-value=91 Score=28.19 Aligned_cols=45 Identities=18% Similarity=0.173 Sum_probs=34.2
Q ss_pred CCCHHHHHHHHHHcCCcEEEEecC-CCCC---------CHHHHHHHHHhcCCeEE
Q 018376 87 YLSPSKLVERAHCNGVKVLALTDH-DTMS---------GIPEAIETARRFGMKII 131 (357)
Q Consensus 87 ~~tp~elv~~A~~~Gl~~iaITDH-dt~~---------g~~~~~~~a~~~gi~vi 131 (357)
..++++.++.|++.|++.|-+.-. ..+. ...++.+++++.|+.+.
T Consensus 14 ~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~ 68 (340)
T 2zds_A 14 DLPLEEVCRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKCW 68 (340)
T ss_dssp TSCHHHHHHHHHHHTCSEEEEESSTTTCCHHHHHHCTTHHHHHHHHHHHTTCEEE
T ss_pred CCCHHHHHHHHHHcCCCEEEeccccccCCccccccCHHHHHHHHHHHHHcCCeEE
Confidence 578999999999999999999853 1121 24567788888888763
No 125
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=33.13 E-value=1.3e+02 Score=27.60 Aligned_cols=56 Identities=9% Similarity=0.023 Sum_probs=38.7
Q ss_pred cCCeEEeeCCCCCCCh--HHHHHHHHHcCCcEEEeecCCC---cHHH--HHHHHHHHhcCCce
Q 018376 263 TGGLAVLAHPWALKNP--AAIIRKLKDVGLHGLEVYRSDG---KLVD--VNFLEKIDNFLLLL 318 (357)
Q Consensus 263 aGGvaVLAHP~~~~~~--~~li~~l~~~GlDGIEv~~~~~---~~~~--~~~~~lA~~~~Ll~ 318 (357)
.|.++|+|+-+..... -++.+.+.+.|.||+=+..|+. +++. +.+..+|+.-++.+
T Consensus 71 ~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPi 133 (293)
T 1f6k_A 71 KDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAETGSNM 133 (293)
T ss_dssp TTSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHCCCE
T ss_pred CCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCE
Confidence 3569999998764321 3455667788999999988865 2222 46778888877654
No 126
>4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV}
Probab=33.11 E-value=75 Score=30.56 Aligned_cols=61 Identities=13% Similarity=0.251 Sum_probs=39.9
Q ss_pred eEEceeeeCcCC--CC---------------------CCCHHHH-------HHHHHHcCCcEEEEecCCCCCCHHHHHHH
Q 018376 73 VVFELHSHSNFS--DG---------------------YLSPSKL-------VERAHCNGVKVLALTDHDTMSGIPEAIET 122 (357)
Q Consensus 73 ~~~DLH~HT~~S--DG---------------------~~tp~el-------v~~A~~~Gl~~iaITDHdt~~g~~~~~~~ 122 (357)
-+||.|+|...+ .| .++++++ +..+.+.|+..+. |+. .....+.+.
T Consensus 74 GlID~H~Hl~~~~~~g~~~~~~l~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~--d~~--~~~~~~~~a 149 (472)
T 4dzh_A 74 GLVNAHTHNPMTLLRGVADDLPLMVWLQQHIWPVEAAVIGPEFVADGTTLAIAEMLRGGTTCVN--ENY--FFADVQAAV 149 (472)
T ss_dssp CEEEEEECGGGGGGTTSSCSCCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEE--EEC--SCHHHHHHH
T ss_pred CccccccChhhHHhccccCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEE--Ecc--cCHHHHHHH
Confidence 589999999764 22 2455543 3347788987654 554 233556677
Q ss_pred HHhcCCeEEEEEEEE
Q 018376 123 ARRFGMKIIPGVEIS 137 (357)
Q Consensus 123 a~~~gi~vi~GiEis 137 (357)
+.+.|++.+.+..+.
T Consensus 150 ~~~~g~r~~~~~~~~ 164 (472)
T 4dzh_A 150 YKQHGFRALVGAVII 164 (472)
T ss_dssp HHHTTCEEEEEEEEC
T ss_pred HHHhCCeEEEEeccc
Confidence 778899888776653
No 127
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=33.00 E-value=80 Score=27.97 Aligned_cols=62 Identities=8% Similarity=0.076 Sum_probs=36.2
Q ss_pred HHHHHHHHc--CCeEEeeCCCCCCChHHHHHHHHHcCCcEEEeecCCCcHHHHHHHHHHHhcCCce
Q 018376 255 VAVQLIHRT--GGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDGKLVDVNFLEKIDNFLLLL 318 (357)
Q Consensus 255 evI~~I~~a--GGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~~~~~~~~~~~lA~~~~Ll~ 318 (357)
++|+.|++. -.+.+-+|-. ..++...++.++++|.|.|-+...... ....+.+.++++|...
T Consensus 52 ~~v~~ir~~~~~~~~~dvhLm-v~~p~~~i~~~~~aGad~itvH~Ea~~-~~~~~i~~i~~~G~k~ 115 (228)
T 3ovp_A 52 PVVESLRKQLGQDPFFDMHMM-VSKPEQWVKPMAVAGANQYTFHLEATE-NPGALIKDIRENGMKV 115 (228)
T ss_dssp HHHHHHHHHHCSSSCEEEEEE-CSCGGGGHHHHHHHTCSEEEEEGGGCS-CHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHhhCCCCcEEEEEE-eCCHHHHHHHHHHcCCCEEEEccCCch-hHHHHHHHHHHcCCCE
Confidence 467777766 2456666643 234455677777778887777542211 1123566677777643
No 128
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=32.60 E-value=22 Score=30.47 Aligned_cols=29 Identities=14% Similarity=-0.161 Sum_probs=23.3
Q ss_pred CCCC-HHHHHHHHHHcCCcEEEEec-CCCCC
Q 018376 86 GYLS-PSKLVERAHCNGVKVLALTD-HDTMS 114 (357)
Q Consensus 86 G~~t-p~elv~~A~~~Gl~~iaITD-Hdt~~ 114 (357)
|.-. |-+++.+|+++|++.+|||- ..+-.
T Consensus 88 g~n~~~ie~A~~ake~G~~vIaITs~~~~~~ 118 (170)
T 3jx9_A 88 TERSDLLASLARYDAWHTPYSIITLGDVTET 118 (170)
T ss_dssp SCCHHHHHHHHHHHHHTCCEEEEESSCCCTT
T ss_pred CCCHHHHHHHHHHHHCCCcEEEEeCcchhcc
Confidence 4433 88999999999999999998 55443
No 129
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=32.42 E-value=1e+02 Score=28.67 Aligned_cols=57 Identities=5% Similarity=-0.003 Sum_probs=38.8
Q ss_pred cCCeEEeeCCCCCCC--hHHHHHHHHHcCCcEEEeecCCC---cHHH--HHHHHHHHhcCCcee
Q 018376 263 TGGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDG---KLVD--VNFLEKIDNFLLLLC 319 (357)
Q Consensus 263 aGGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~---~~~~--~~~~~lA~~~~Ll~t 319 (357)
.|.++|+|+-+.... .-++.+.+.+.|.||+=+..|+. +++. +.+.++|+.-++.+.
T Consensus 91 ~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPii 154 (315)
T 3na8_A 91 AHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLPISYWKLNEAEVFQHYRAVGEAIGVPVM 154 (315)
T ss_dssp TTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCSSCEE
T ss_pred CCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCcEE
Confidence 456899998775332 23455667888999999988764 2222 467888888776653
No 130
>2da2_A Alpha-fetoprotein enhancer binding protein; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics; NMR {Homo sapiens}
Probab=32.21 E-value=1.1e+02 Score=21.44 Aligned_cols=22 Identities=9% Similarity=0.065 Sum_probs=17.2
Q ss_pred CCCCCCCCCHHHHhHHHHHhhh
Q 018376 22 RGGGKKKMTAEQSLAFNSVTEW 43 (357)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~ 43 (357)
+++++..+|.+|...|..+++-
T Consensus 7 ~rr~Rt~ft~~q~~~Le~~F~~ 28 (70)
T 2da2_A 7 GRSSRTRFTDYQLRVLQDFFDA 28 (70)
T ss_dssp SCCCCCCCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHc
Confidence 3445667999999999988865
No 131
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=32.01 E-value=1e+02 Score=28.26 Aligned_cols=57 Identities=14% Similarity=0.057 Sum_probs=39.1
Q ss_pred cCCeEEeeCCCCCCC--hHHHHHHHHHcCCcEEEeecCCC-c--HHH--HHHHHHHHhcCCcee
Q 018376 263 TGGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDG-K--LVD--VNFLEKIDNFLLLLC 319 (357)
Q Consensus 263 aGGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~-~--~~~--~~~~~lA~~~~Ll~t 319 (357)
.|.++|+|+-+.... .-++.+.+.+.|.||+=+..|+. . ++. ..+..+|+.-+|.+.
T Consensus 69 ~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPii 132 (292)
T 3daq_A 69 DKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITPYYNKTNQRGLVKHFEAIADAVKLPVV 132 (292)
T ss_dssp TTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHCSCEE
T ss_pred CCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEE
Confidence 467899999775332 23455667788999999988764 2 222 467888887777653
No 132
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=31.50 E-value=1.1e+02 Score=28.58 Aligned_cols=57 Identities=9% Similarity=0.067 Sum_probs=38.7
Q ss_pred cCCeEEeeCCCCCCC--hHHHHHHHHHcCCcEEEeecCCCc---HHH--HHHHHHHHhcCCcee
Q 018376 263 TGGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDGK---LVD--VNFLEKIDNFLLLLC 319 (357)
Q Consensus 263 aGGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~~---~~~--~~~~~lA~~~~Ll~t 319 (357)
.|.++|+|+-+.... .-++.+.+.+.|.||+=+..|+.. ++. ..|..+|+.-+|.+.
T Consensus 89 ~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPii 152 (315)
T 3si9_A 89 AKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKAISIPII 152 (315)
T ss_dssp TTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEE
T ss_pred CCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHcCCCCEE
Confidence 366899998775332 134556678889999999887642 222 467888888777653
No 133
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=31.13 E-value=1.3e+02 Score=27.49 Aligned_cols=57 Identities=12% Similarity=0.085 Sum_probs=40.1
Q ss_pred cCCeEEeeCCCCCCC--hHHHHHHHHHcCCcEEEeecCCC---cHHH--HHHHHHHHhcCCcee
Q 018376 263 TGGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDG---KLVD--VNFLEKIDNFLLLLC 319 (357)
Q Consensus 263 aGGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~---~~~~--~~~~~lA~~~~Ll~t 319 (357)
.|.++|+|+-+.... .-++.+.+.+.|.||+=+..|+. +++. ..+..+|+.-+|.+.
T Consensus 68 ~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPii 131 (291)
T 3tak_A 68 NKRIPIIAGTGANSTREAIELTKAAKDLGADAALLVTPYYNKPTQEGLYQHYKAIAEAVELPLI 131 (291)
T ss_dssp TTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEE
Confidence 366899999875432 23455677889999999988864 2222 468889998777653
No 134
>2zxd_A Alpha-L-fucosidase, putative; TIM barrel, hydrolase; HET: ZXD; 2.15A {Thermotoga maritima} PDB: 2zwy_A* 2zx5_A* 2zx6_A* 2zx7_A* 2zwz_A* 2zx9_A* 2zxa_A* 2zxb_A* 2zx8_A* 1hl9_A* 1hl8_A* 1odu_A* 2wsp_A*
Probab=31.12 E-value=95 Score=30.67 Aligned_cols=53 Identities=21% Similarity=0.350 Sum_probs=39.3
Q ss_pred CCCCCCCHHHHHHHHHHcCCcEEEEe-cC--------------CCCC------CHHHHHHHHHhcCCeEEEEEEEE
Q 018376 83 FSDGYLSPSKLVERAHCNGVKVLALT-DH--------------DTMS------GIPEAIETARRFGMKIIPGVEIS 137 (357)
Q Consensus 83 ~SDG~~tp~elv~~A~~~Gl~~iaIT-DH--------------dt~~------g~~~~~~~a~~~gi~vi~GiEis 137 (357)
|.-..+.|++.++.|++.|++.+.+| -| +++. =+.++.++|++.||++ |+=+|
T Consensus 100 F~p~~fDp~~Wa~~~k~AGakyvvlTaKHHDGF~lwpSk~t~~ns~~~~pkrDlv~El~~A~rk~Glk~--GlY~S 173 (455)
T 2zxd_A 100 FTAEKWDPQEWADLFKKAGAKYVIPTTKHHDGFCLWGTKYTDFNSVKRGPKRDLVGDLAKAVREAGLRF--GVYYS 173 (455)
T ss_dssp CCCTTCCHHHHHHHHHHTTCSEEEEEEECTTCCBSSCCSSCSCBTTTSTTCSCHHHHHHHHHHHTTCEE--EEEEE
T ss_pred CCcccCCHHHHHHHHHHhCCCEEEEEeeccCCccccCCCCCCCcccccCCCCChHHHHHHHHHHcCCeE--EEEec
Confidence 33457999999999999999999987 23 2221 1567889999998875 44455
No 135
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=29.92 E-value=3.4e+02 Score=25.11 Aligned_cols=67 Identities=19% Similarity=0.077 Sum_probs=41.0
Q ss_pred CCCHHHHHHHHHHcCCeE--EeeCCCCC---CChHHHHHHH---HHcCCcEEEeecCCCcHHHHHHHHHHHhcCC
Q 018376 250 EPLAEVAVQLIHRTGGLA--VLAHPWAL---KNPAAIIRKL---KDVGLHGLEVYRSDGKLVDVNFLEKIDNFLL 316 (357)
Q Consensus 250 ~~~~eevI~~I~~aGGva--VLAHP~~~---~~~~~li~~l---~~~GlDGIEv~~~~~~~~~~~~~~lA~~~~L 316 (357)
+....+.|+.|++.+++. |.++|... .+.+..+..| .++|-|.+=.=.-++......+.+.|++.|+
T Consensus 129 ~~~A~dLv~~ir~~~~f~IgvA~yPE~Hp~a~~~~~d~~~Lk~KvdAGAdf~iTQ~ffD~~~~~~f~~~~r~~Gi 203 (304)
T 3fst_A 129 EMYASDLVTLLKEVADFDISVAAYPEVHPEAKSAQADLLNLKRKVDAGANRAITQFFFDVESYLRFRDRCVSAGI 203 (304)
T ss_dssp CCCHHHHHHHHHHHCCCEEEEEECTTCCTTCSCHHHHHHHHHHHHHHTCCEEEECCCSCHHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHcCCCeEEEEeCCCcCCCCCCHHHHHHHHHHHHHcCCCEEEeCccCCHHHHHHHHHHHHhcCC
Confidence 456789999999888764 56655321 2223334444 3679888655333443444467788888764
No 136
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=29.83 E-value=38 Score=33.14 Aligned_cols=77 Identities=12% Similarity=0.259 Sum_probs=48.6
Q ss_pred HhhCCCCcccCCCCCCHHHHHHHHHHc------CCeEEeeCCCCCCChHHHHHHHHHcCCcEEEe----ecC--------
Q 018376 237 YLYDGGPAYSTGSEPLAEVAVQLIHRT------GGLAVLAHPWALKNPAAIIRKLKDVGLHGLEV----YRS-------- 298 (357)
Q Consensus 237 yl~~~~~~yv~~~~~~~eevI~~I~~a------GGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv----~~~-------- 298 (357)
||+.|.|.+.+. ..+.++++.|++. -.+.+-++|.... .+.++.|++.|++-|++ +++
T Consensus 109 ~fgGGtpt~l~~--~~l~~ll~~i~~~~~~~~~~eitie~~p~~l~--~e~l~~L~~~G~~rislGvQS~~~~~l~~i~R 184 (457)
T 1olt_A 109 HWGGGTPTYLNK--AQISRLMKLLRENFQFNADAEISIEVDPREIE--LDVLDHLRAEGFNRLSMGVQDFNKEVQRLVNR 184 (457)
T ss_dssp EEEESCGGGSCH--HHHHHHHHHHHHHSCEEEEEEEEEEECSSSCC--THHHHHHHHTTCCEEEEEEECCCHHHHHHHTC
T ss_pred EEeCCCcccCCH--HHHHHHHHHHHHhCCCCCCcEEEEEEccCcCC--HHHHHHHHHcCCCEEEEeeccCCHHHHHHhCC
Confidence 455555544321 2357788888772 2577888997653 46788999999886655 321
Q ss_pred CCcHHH-HHHHHHHHhcCCc
Q 018376 299 DGKLVD-VNFLEKIDNFLLL 317 (357)
Q Consensus 299 ~~~~~~-~~~~~lA~~~~Ll 317 (357)
.++.++ ....+.|++.|+-
T Consensus 185 ~~~~~~~~~ai~~~r~~G~~ 204 (457)
T 1olt_A 185 EQDEEFIFALLNHAREIGFT 204 (457)
T ss_dssp CCCHHHHHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHHHHHHHcCCC
Confidence 122222 3567888888885
No 137
>1bw5_A ISL-1HD, insulin gene enhancer protein ISL-1; DNA-binding protein, homeodomain, LIM domain; NMR {Rattus norvegicus} SCOP: a.4.1.1
Probab=29.70 E-value=1.1e+02 Score=21.21 Aligned_cols=22 Identities=5% Similarity=-0.034 Sum_probs=17.8
Q ss_pred CCCCCCCCCHHHHhHHHHHhhh
Q 018376 22 RGGGKKKMTAEQSLAFNSVTEW 43 (357)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~ 43 (357)
+++++..+|.+|...|...++-
T Consensus 3 ~rr~Rt~ft~~q~~~Le~~F~~ 24 (66)
T 1bw5_A 3 TTRVRTVLNEKQLHTLRTCYAA 24 (66)
T ss_dssp CSCCCCCCSHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHhc
Confidence 4456778999999999988865
No 138
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=29.64 E-value=89 Score=25.17 Aligned_cols=43 Identities=16% Similarity=0.241 Sum_probs=35.0
Q ss_pred CCCCCCHHHHhHHHHHhhhhccCCCCCCCCCCCccccccccccCCCCceEEceeeeCcCCCCCCCHHHHHHHHHHcCCc
Q 018376 25 GKKKMTAEQSLAFNSVTEWVYLDQSHSSSSSEDDFGVHQILNRAVDNNVVFELHSHSNFSDGYLSPSKLVERAHCNGVK 103 (357)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~ 103 (357)
++.++|.+|...|+.+++-++.+. ||.++.++|....+..|..
T Consensus 6 ~~~~Lt~~qi~elk~~F~~~D~d~------------------------------------dG~I~~~El~~~l~~lg~~ 48 (153)
T 3i5g_B 6 RRVKLSQRQMQELKEAFTMIDQDR------------------------------------DGFIGMEDLKDMFSSLGRV 48 (153)
T ss_dssp -CTTCCHHHHHHHHHHHHHHCCST------------------------------------TSCCCHHHHHHHHHHTTSC
T ss_pred cccCCCHHHHHHHHHHHHHHCCCC------------------------------------CCeEcHHHHHHHHHHcCCC
Confidence 456799999999999999875542 6789999999888888864
No 139
>2dmu_A Homeobox protein goosecoid; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.63 E-value=1.1e+02 Score=21.37 Aligned_cols=21 Identities=19% Similarity=0.093 Sum_probs=16.7
Q ss_pred CCCCCCCCHHHHhHHHHHhhh
Q 018376 23 GGGKKKMTAEQSLAFNSVTEW 43 (357)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~ 43 (357)
++++..+|.+|...|...++-
T Consensus 8 rr~Rt~ft~~q~~~Le~~F~~ 28 (70)
T 2dmu_A 8 RRHRTIFTDEQLEALENLFQE 28 (70)
T ss_dssp CCCCCCCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHc
Confidence 345567999999999988865
No 140
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=29.58 E-value=77 Score=26.88 Aligned_cols=41 Identities=22% Similarity=0.344 Sum_probs=31.5
Q ss_pred CCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcCCeEEEEE
Q 018376 88 LSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGV 134 (357)
Q Consensus 88 ~tp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vi~Gi 134 (357)
.++++ ++.|.+.|.+++ +..... .++.+.+++.|+.+++|+
T Consensus 71 ~~~~~-~~~a~~~Gad~i-v~~~~~----~~~~~~~~~~g~~vi~g~ 111 (205)
T 1wa3_A 71 TSVEQ-CRKAVESGAEFI-VSPHLD----EEISQFCKEKGVFYMPGV 111 (205)
T ss_dssp CSHHH-HHHHHHHTCSEE-ECSSCC----HHHHHHHHHHTCEEECEE
T ss_pred CCHHH-HHHHHHcCCCEE-EcCCCC----HHHHHHHHHcCCcEECCc
Confidence 36776 588889999999 654322 567788888999999965
No 141
>2ood_A BLR3880 protein; PSI-II, PSI-2, guanine deaminase, guanine, structural genomics, protein structure initiative; HET: GUN; 2.62A {Bradyrhizobium japonicum} SCOP: b.92.1.4 c.1.9.9
Probab=29.56 E-value=58 Score=31.50 Aligned_cols=62 Identities=19% Similarity=0.185 Sum_probs=38.3
Q ss_pred eEEceeeeCcCC-----CCC-----------------CCHHHH-------HHHHHHcCCcEEEEecCCCCC--CHHHHHH
Q 018376 73 VVFELHSHSNFS-----DGY-----------------LSPSKL-------VERAHCNGVKVLALTDHDTMS--GIPEAIE 121 (357)
Q Consensus 73 ~~~DLH~HT~~S-----DG~-----------------~tp~el-------v~~A~~~Gl~~iaITDHdt~~--g~~~~~~ 121 (357)
-+||.|+|...+ .|. .+++++ +..+.+.|+..+.- +.+.. .+..+.+
T Consensus 74 G~ID~H~Hl~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~~--~~~~~~~~~~~~~~ 151 (475)
T 2ood_A 74 GFIDGHIHLPQTRVLGAYGEQLLPWLQKSIYPEEIKYKDRNYAREGVKRFLDALLAAGTTTCQA--FTSSSPVATEELFE 151 (475)
T ss_dssp CEEEEEEEGGGTTCTTCCSCCHHHHHHHHTHHHHGGGGSHHHHHHHHHHHHHHHHHTTEEEEEE--ECCSSHHHHHHHHH
T ss_pred ceecCcccHHhHhhcCCCCCCHHHHHHHhccchhhccCCHHHHHHHHHHHHHHHHhcCceEEEE--ecccCchhHHHHHH
Confidence 589999997533 111 146665 67888999887664 32221 2344556
Q ss_pred HHHhcCCeEEEEEEE
Q 018376 122 TARRFGMKIIPGVEI 136 (357)
Q Consensus 122 ~a~~~gi~vi~GiEi 136 (357)
.+++.|++++.|..+
T Consensus 152 ~~~~~g~r~~~g~~~ 166 (475)
T 2ood_A 152 EASRRNMRVIAGLTG 166 (475)
T ss_dssp HHHHHTCCEEECCEE
T ss_pred HHHHcCCeEEEEeee
Confidence 667778877666543
No 142
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=29.55 E-value=75 Score=28.47 Aligned_cols=46 Identities=20% Similarity=0.148 Sum_probs=35.8
Q ss_pred CCCHHHHHHHHHHcCCcEEEEecCC------CCCCHHHHHHHHHhcCCeEEE
Q 018376 87 YLSPSKLVERAHCNGVKVLALTDHD------TMSGIPEAIETARRFGMKIIP 132 (357)
Q Consensus 87 ~~tp~elv~~A~~~Gl~~iaITDHd------t~~g~~~~~~~a~~~gi~vi~ 132 (357)
..++++.++.|++.|+++|-|.-.+ .-....++.+.+++.|+.+..
T Consensus 35 ~~~~~~~l~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~ 86 (296)
T 2g0w_A 35 EVSFPKRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMKVTE 86 (296)
T ss_dssp TSCHHHHHHHHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHHTTCEEEE
T ss_pred CCCHHHHHHHHHHcCCCEEEeCHHHHHHHHhcCCcHHHHHHHHHHcCCceEe
Confidence 3899999999999999999997532 123467788888889887543
No 143
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=29.53 E-value=92 Score=25.88 Aligned_cols=50 Identities=14% Similarity=0.207 Sum_probs=34.1
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEecCCCCC--CHHHHHHHHHhcC---CeEEEEE
Q 018376 85 DGYLSPSKLVERAHCNGVKVLALTDHDTMS--GIPEAIETARRFG---MKIIPGV 134 (357)
Q Consensus 85 DG~~tp~elv~~A~~~Gl~~iaITDHdt~~--g~~~~~~~a~~~g---i~vi~Gi 134 (357)
....+|+++++.|++.+.+.|+++=-.+.. ...++.+..++.+ ++++.|=
T Consensus 53 G~~~p~e~lv~aa~~~~~diV~lS~~~~~~~~~~~~~i~~L~~~g~~~i~v~vGG 107 (161)
T 2yxb_A 53 GLRQTPEQVAMAAVQEDVDVIGVSILNGAHLHLMKRLMAKLRELGADDIPVVLGG 107 (161)
T ss_dssp CSBCCHHHHHHHHHHTTCSEEEEEESSSCHHHHHHHHHHHHHHTTCTTSCEEEEE
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEEeechhhHHHHHHHHHHHHhcCCCCCEEEEeC
Confidence 345899999999999999999998654422 2344444555543 5666653
No 144
>1fjl_A Paired protein; DNA-binding protein, paired BOX, transcription regulation; HET: DNA; 2.00A {Drosophila melanogaster} SCOP: a.4.1.1 PDB: 3a01_B
Probab=29.50 E-value=1e+02 Score=22.29 Aligned_cols=23 Identities=17% Similarity=0.160 Sum_probs=17.9
Q ss_pred cCCCCCCCCCHHHHhHHHHHhhh
Q 018376 21 KRGGGKKKMTAEQSLAFNSVTEW 43 (357)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~ 43 (357)
++++++..+|.+|...|...+.-
T Consensus 17 ~~rr~Rt~ft~~Q~~~Le~~F~~ 39 (81)
T 1fjl_A 17 KQRRSRTTFSASQLDELERAFER 39 (81)
T ss_dssp CCCCCCCCCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHH
Confidence 34455678999999999998864
No 145
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=29.42 E-value=1.5e+02 Score=27.24 Aligned_cols=56 Identities=14% Similarity=0.193 Sum_probs=38.5
Q ss_pred cCCeEEeeCCCCCCC--hHHHHHHHHHcCCcEEEeecCCC---cHHH--HHHHHHHHhcC-Cce
Q 018376 263 TGGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDG---KLVD--VNFLEKIDNFL-LLL 318 (357)
Q Consensus 263 aGGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~---~~~~--~~~~~lA~~~~-Ll~ 318 (357)
.|.++|+|+-+.... .-++.+.+.+.|.||+=+..|+. +++. +.|..+|+.-+ |.+
T Consensus 78 ~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~~lPi 141 (303)
T 2wkj_A 78 KGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPM 141 (303)
T ss_dssp TTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHTTCCE
T ss_pred CCCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecCCCCCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 356999999875432 13455667788999999988865 2222 46778888776 654
No 146
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=29.27 E-value=1.5e+02 Score=27.17 Aligned_cols=56 Identities=13% Similarity=0.115 Sum_probs=38.6
Q ss_pred cCCeEEeeCCCCCCC--hHHHHHHHHHcCCcEEEeecCCC---cHHH--HHHHHHHHhcCCce
Q 018376 263 TGGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDG---KLVD--VNFLEKIDNFLLLL 318 (357)
Q Consensus 263 aGGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~---~~~~--~~~~~lA~~~~Ll~ 318 (357)
.|.++|+|+-+.... .-++.+.+.+.|.||+=+..|+. +++. +.|..+|+.-+|.+
T Consensus 79 ~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPi 141 (301)
T 1xky_A 79 DKRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAESTPLPV 141 (301)
T ss_dssp TTSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHTCSSCE
T ss_pred CCCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCE
Confidence 356899999875432 13455667788999999988765 2222 46778888877765
No 147
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=29.18 E-value=1.5e+02 Score=27.54 Aligned_cols=55 Identities=11% Similarity=-0.019 Sum_probs=39.2
Q ss_pred cCCeEEeeCCCCCCCh--HHHHHHHHHcCCcEEEeecCCC---cHHH--HHHHHHHHhcCCce
Q 018376 263 TGGLAVLAHPWALKNP--AAIIRKLKDVGLHGLEVYRSDG---KLVD--VNFLEKIDNFLLLL 318 (357)
Q Consensus 263 aGGvaVLAHP~~~~~~--~~li~~l~~~GlDGIEv~~~~~---~~~~--~~~~~lA~~~~Ll~ 318 (357)
.|.++|+|+-+. ... -++.+.+.+.|.||+=+..|+. +++. +.|..+|+.-+|.+
T Consensus 79 ~grvpViaGvg~-st~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPi 140 (314)
T 3d0c_A 79 NGRATVVAGIGY-SVDTAIELGKSAIDSGADCVMIHQPVHPYITDAGAVEYYRNIIEALDAPS 140 (314)
T ss_dssp TTSSEEEEEECS-SHHHHHHHHHHHHHTTCSEEEECCCCCSCCCHHHHHHHHHHHHHHSSSCE
T ss_pred CCCCeEEecCCc-CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCE
Confidence 356999999887 422 3355667889999999988865 2222 46788999877664
No 148
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=29.17 E-value=2e+02 Score=25.64 Aligned_cols=61 Identities=11% Similarity=-0.023 Sum_probs=44.0
Q ss_pred HHHHHHHHHHcCCeEEeeCCCCCCChHHHHHHHHHcCCcEEEeecCCCcHHHHHHHHHHHhcC
Q 018376 253 AEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDGKLVDVNFLEKIDNFL 315 (357)
Q Consensus 253 ~eevI~~I~~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~~~~~~~~~~~lA~~~~ 315 (357)
+.++.+.+.+.+=++|+-.... ....++.+.+.+.|++.||+-...... .+.+.++++++.
T Consensus 24 m~~~~~~l~~~~vv~Vir~~~~-~~a~~~a~al~~gGi~~iEvt~~t~~a-~e~I~~l~~~~~ 84 (232)
T 4e38_A 24 MSTINNQLKALKVIPVIAIDNA-EDIIPLGKVLAENGLPAAEITFRSDAA-VEAIRLLRQAQP 84 (232)
T ss_dssp HHHHHHHHHHHCEEEEECCSSG-GGHHHHHHHHHHTTCCEEEEETTSTTH-HHHHHHHHHHCT
T ss_pred HHHHHHHHHhCCEEEEEEcCCH-HHHHHHHHHHHHCCCCEEEEeCCCCCH-HHHHHHHHHhCC
Confidence 5678999999999999987532 334667888999999999995533222 124667777774
No 149
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=28.97 E-value=1e+02 Score=26.69 Aligned_cols=16 Identities=6% Similarity=0.073 Sum_probs=7.1
Q ss_pred HHHHHHHcCCeEEeeC
Q 018376 256 AVQLIHRTGGLAVLAH 271 (357)
Q Consensus 256 vI~~I~~aGGvaVLAH 271 (357)
.++...++|.=.+.-|
T Consensus 75 ~~~~~~~aGad~i~vh 90 (218)
T 3jr2_A 75 LSRMAFEAGADWITVS 90 (218)
T ss_dssp HHHHHHHHTCSEEEEE
T ss_pred HHHHHHhcCCCEEEEe
Confidence 3444444444444444
No 150
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=28.69 E-value=56 Score=30.98 Aligned_cols=43 Identities=19% Similarity=0.333 Sum_probs=32.4
Q ss_pred hHHHHHHHHHcCCcEEEeec----CCCc------HHHHHHHHHHHhcCCceee
Q 018376 278 PAAIIRKLKDVGLHGLEVYR----SDGK------LVDVNFLEKIDNFLLLLCL 320 (357)
Q Consensus 278 ~~~li~~l~~~GlDGIEv~~----~~~~------~~~~~~~~lA~~~~Ll~t~ 320 (357)
..+.++.++++|++|||++. +... .....+.++++++||-++.
T Consensus 35 ~~e~l~~aa~~G~~~VEl~~~~~~p~~~~~~~~~~~~~~l~~~l~~~GL~i~~ 87 (386)
T 1muw_A 35 PVETVQRLAELGAHGVTFHDDDLIPFGSSDTERESHIKRFRQALDATGMTVPM 87 (386)
T ss_dssp HHHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHHTCBCCE
T ss_pred HHHHHHHHHHcCCCEEEeeCCCCCcccCcccccHHHHHHHHHHHHHhCCeEEE
Confidence 56788889999999999986 3221 1224688999999998764
No 151
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=28.65 E-value=70 Score=27.73 Aligned_cols=52 Identities=13% Similarity=0.197 Sum_probs=36.0
Q ss_pred ceEEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcCCeE
Q 018376 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKI 130 (357)
Q Consensus 72 ~~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~v 130 (357)
.+.+|+|.|. .|+..++.+.+.|.+.+.+-+-.......++.+.+++.|+.+
T Consensus 61 ~i~ld~~l~d-------~p~~~~~~~~~aGad~i~vh~~~~~~~~~~~~~~~~~~g~~~ 112 (218)
T 3jr2_A 61 ILVCDMKTTD-------GGAILSRMAFEAGADWITVSAAAHIATIAACKKVADELNGEI 112 (218)
T ss_dssp EEEEEEEECS-------CHHHHHHHHHHHTCSEEEEETTSCHHHHHHHHHHHHHHTCEE
T ss_pred cEEEEEeecc-------cHHHHHHHHHhcCCCEEEEecCCCHHHHHHHHHHHHHhCCcc
Confidence 4677888873 477789999999999998844322112355666777777654
No 152
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=28.47 E-value=1.3e+02 Score=27.45 Aligned_cols=55 Identities=15% Similarity=0.151 Sum_probs=35.1
Q ss_pred CCeEEeeCCCCCCC--hHHHHHHHHHcCCcEEEeecCCC---cHHH--HHHHHHHHhcCCce
Q 018376 264 GGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDG---KLVD--VNFLEKIDNFLLLL 318 (357)
Q Consensus 264 GGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~---~~~~--~~~~~lA~~~~Ll~ 318 (357)
|.++|+|+-+.... .-++.+.+.+.|.||+=+..|+. +++. +.+..+|+.-++.+
T Consensus 68 gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPi 129 (292)
T 2vc6_A 68 GRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAASTIPI 129 (292)
T ss_dssp TSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCE
T ss_pred CCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCE
Confidence 55888888765331 13345556778888888877764 2222 35677888777654
No 153
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=28.40 E-value=71 Score=25.93 Aligned_cols=38 Identities=32% Similarity=0.294 Sum_probs=29.0
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcCCeEE
Q 018376 91 SKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKII 131 (357)
Q Consensus 91 ~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vi 131 (357)
.++++++.+.|.+.+.++.. + ...++.+++++.|++++
T Consensus 91 ~~vv~~~~~~gi~~i~~~~g-~--~~~~l~~~a~~~Gi~vv 128 (144)
T 2d59_A 91 MEYVEQAIKKGAKVVWFQYN-T--YNREASKKADEAGLIIV 128 (144)
T ss_dssp HHHHHHHHHHTCSEEEECTT-C--CCHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHcCCCEEEECCC-c--hHHHHHHHHHHcCCEEE
Confidence 45688888999999877642 2 25788888999998866
No 154
>3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} SCOP: c.1.8.3 PDB: 3f55_A*
Probab=28.20 E-value=97 Score=29.14 Aligned_cols=46 Identities=15% Similarity=0.268 Sum_probs=39.6
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcCCeEEEEEE
Q 018376 85 DGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVE 135 (357)
Q Consensus 85 DG~~tp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vi~GiE 135 (357)
|--.+|.++++..+.+|++.|=|-|-| +.+.++++..||+++.|+-
T Consensus 11 ~nlp~p~~vv~llks~gi~~VRlYdaD-----~~vL~Al~~sgi~v~vGV~ 56 (316)
T 3em5_A 11 NNLPPVSEVIALYKKSNITRMRIYDPN-----QAVLEALRGSNIELILGVP 56 (316)
T ss_dssp TTCCCHHHHHHHHHHTTCCEEECSSCC-----HHHHHHHTTCCCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHcCCCEEEEecCC-----HHHHHHhhcCCceEEEecc
Confidence 445789999999999999999998866 4677888889999999996
No 155
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=28.18 E-value=33 Score=31.98 Aligned_cols=61 Identities=18% Similarity=0.270 Sum_probs=41.5
Q ss_pred HHHHHcCCeEEeeCCCC---CCChHHHHHHHHHcCCcEEEeecC--------------CCc---HHHHHHHHHHHhcCCc
Q 018376 258 QLIHRTGGLAVLAHPWA---LKNPAAIIRKLKDVGLHGLEVYRS--------------DGK---LVDVNFLEKIDNFLLL 317 (357)
Q Consensus 258 ~~I~~aGGvaVLAHP~~---~~~~~~li~~l~~~GlDGIEv~~~--------------~~~---~~~~~~~~lA~~~~Ll 317 (357)
+.+-....++|+|=-.. ......+++.++++|+.|+ +.|| .+. .......+.|++.||+
T Consensus 87 evlp~v~~iPV~Agv~~~DP~~~~g~~Le~lk~~Gf~Gv-~N~ptvglidG~fr~~LEE~gm~~~~eve~I~~A~~~gL~ 165 (286)
T 2p10_A 87 EVLPVVRHTPVLAGVNGTDPFMVMSTFLRELKEIGFAGV-QNFPTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHKLDLL 165 (286)
T ss_dssp HHGGGCSSSCEEEEECTTCTTCCHHHHHHHHHHHTCCEE-EECSCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHTTCE
T ss_pred hhhccCCCCCEEEEECCcCCCcCHHHHHHHHHHhCCceE-EECCCcccccchhhhhHhhcCCCHHHHHHHHHHHHHCCCe
Confidence 45555667888875211 1234667799999999999 8888 211 1223578899999999
Q ss_pred ee
Q 018376 318 LC 319 (357)
Q Consensus 318 ~t 319 (357)
.+
T Consensus 166 Ti 167 (286)
T 2p10_A 166 TT 167 (286)
T ss_dssp EC
T ss_pred EE
Confidence 75
No 156
>2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus}
Probab=28.11 E-value=56 Score=30.57 Aligned_cols=59 Identities=15% Similarity=0.102 Sum_probs=37.5
Q ss_pred eEEceeeeCcCC--CCCCCHHHHHHHHHHcCCcEEEEecC-CCC----CCHHHHHHHHHhcC-CeEE
Q 018376 73 VVFELHSHSNFS--DGYLSPSKLVERAHCNGVKVLALTDH-DTM----SGIPEAIETARRFG-MKII 131 (357)
Q Consensus 73 ~~~DLH~HT~~S--DG~~tp~elv~~A~~~Gl~~iaITDH-dt~----~g~~~~~~~a~~~g-i~vi 131 (357)
-.+|.|+|...+ +-..+.....+.+.+.|+..+..+=. +.. ..+..+.+.+++.+ +.++
T Consensus 50 G~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (426)
T 2z00_A 50 GFLDLHAHLREPGEEVKEDLFSGLLAAVRGGYTDLVSMPNTKPPVDTPEAVRALKEKAKALGLARLH 116 (426)
T ss_dssp CEEEEEECCCTTTCTTTCCHHHHHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHTSSEEC
T ss_pred CEEEeccccCCCCCCchHHHHHHHHHHHhCCccEEEecCCCCCCcChHHHHHHHHHHhcccCcccEE
Confidence 489999998764 12345778889999999988766432 111 12344555566666 5553
No 157
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=27.79 E-value=2e+02 Score=26.61 Aligned_cols=57 Identities=14% Similarity=0.062 Sum_probs=40.2
Q ss_pred cCCeEEeeCCCCCCC--hHHHHHHHHHcCCcEEEeecCCC---cHHH--HHHHHHHHhcCCcee
Q 018376 263 TGGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDG---KLVD--VNFLEKIDNFLLLLC 319 (357)
Q Consensus 263 aGGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~---~~~~--~~~~~lA~~~~Ll~t 319 (357)
.|.++|+|+-+.... .-++.+.+.+.|.||+=+..|+. +++. +.+..+|+.-+|.+.
T Consensus 90 ~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPii 153 (314)
T 3qze_A 90 KGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAVAIPQI 153 (314)
T ss_dssp TTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHSCSCEE
T ss_pred CCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEE
Confidence 356899999875432 23456677889999999988864 2222 468889998887653
No 158
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=27.49 E-value=80 Score=27.95 Aligned_cols=46 Identities=9% Similarity=-0.034 Sum_probs=36.3
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcCCeEEEE
Q 018376 86 GYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPG 133 (357)
Q Consensus 86 G~~tp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vi~G 133 (357)
..+++++.++.+++.|++.|-+..... ...++.+.+++.|+.+...
T Consensus 29 ~~~~~~~~l~~~~~~G~~~vEl~~~~~--~~~~~~~~l~~~gl~~~~~ 74 (301)
T 3cny_A 29 KDNNLQQLLSDIVVAGFQGTEVGGFFP--GPEKLNYELKLRNLEIAGQ 74 (301)
T ss_dssp TTCCHHHHHHHHHHHTCCEECCCTTCC--CHHHHHHHHHHTTCEECEE
T ss_pred cCCCHHHHHHHHHHhCCCEEEecCCCC--CHHHHHHHHHHCCCeEEEE
Confidence 357899999999999999999883322 5677888888899886654
No 159
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=27.02 E-value=41 Score=28.42 Aligned_cols=25 Identities=28% Similarity=0.300 Sum_probs=20.6
Q ss_pred CCCHHHHHHHHHHcCCcEEEEecCC
Q 018376 87 YLSPSKLVERAHCNGVKVLALTDHD 111 (357)
Q Consensus 87 ~~tp~elv~~A~~~Gl~~iaITDHd 111 (357)
+-..-++++.|+++|.+.++||+..
T Consensus 126 t~~~i~~~~~ak~~g~~vI~IT~~~ 150 (199)
T 1x92_A 126 SANVIQAIQAAHDREMLVVALTGRD 150 (199)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CHHHHHHHHHHHHCCCEEEEEECCC
Confidence 3445678999999999999999963
No 160
>2e1o_A Homeobox protein PRH; DNA binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=26.97 E-value=1.5e+02 Score=20.78 Aligned_cols=21 Identities=19% Similarity=0.419 Sum_probs=16.7
Q ss_pred CCCCCCCCHHHHhHHHHHhhh
Q 018376 23 GGGKKKMTAEQSLAFNSVTEW 43 (357)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~ 43 (357)
++++..+|.+|...|...++-
T Consensus 8 ~r~R~~ft~~q~~~Le~~F~~ 28 (70)
T 2e1o_A 8 KGGQVRFSNDQTIELEKKFET 28 (70)
T ss_dssp CCCCCCCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHc
Confidence 345667999999999998854
No 161
>2dmt_A Homeobox protein BARH-like 1; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.72 E-value=1.1e+02 Score=22.05 Aligned_cols=22 Identities=14% Similarity=0.042 Sum_probs=17.2
Q ss_pred CCCCCCCCCHHHHhHHHHHhhh
Q 018376 22 RGGGKKKMTAEQSLAFNSVTEW 43 (357)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~ 43 (357)
+++++..+|.+|...|...++-
T Consensus 17 ~rr~Rt~ft~~Q~~~Le~~F~~ 38 (80)
T 2dmt_A 17 GRRSRTVFTELQLMGLEKRFEK 38 (80)
T ss_dssp CCCSCCCCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHh
Confidence 3445667999999999988864
No 162
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=26.66 E-value=44 Score=27.80 Aligned_cols=25 Identities=28% Similarity=0.290 Sum_probs=20.6
Q ss_pred CCHHHHHHHHHHcCCcEEEEecCCC
Q 018376 88 LSPSKLVERAHCNGVKVLALTDHDT 112 (357)
Q Consensus 88 ~tp~elv~~A~~~Gl~~iaITDHdt 112 (357)
-..-++++.|+++|.+.++||+...
T Consensus 101 ~~~~~~~~~ak~~g~~vi~IT~~~~ 125 (187)
T 3sho_A 101 RDTVAALAGAAERGVPTMALTDSSV 125 (187)
T ss_dssp HHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 3455788999999999999999643
No 163
>2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3
Probab=26.65 E-value=1.6e+02 Score=27.46 Aligned_cols=48 Identities=21% Similarity=0.331 Sum_probs=40.1
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcCCeEEEEEEEE
Q 018376 85 DGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVEIS 137 (357)
Q Consensus 85 DG~~tp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vi~GiEis 137 (357)
+---+|+++++..+..|++.|=|=|-| +...++++..||+++.|+-.+
T Consensus 10 ~~~ps~~~vv~llk~~~i~~vRlY~~d-----~~vl~A~~~tgi~v~lgv~n~ 57 (312)
T 2cyg_A 10 NNLPPPSEVVSLYKSNNIARMRLYDPN-----QAALQALRNSNIQVLLDVPRS 57 (312)
T ss_dssp SSCCCHHHHHHHHHHTTCCEEEESSCC-----HHHHHHHTTSCCEEEEEECHH
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEcCCC-----HHHHHHHHhcCCEEEEecccc
Confidence 335789999999999999999998865 567777888999999998753
No 164
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=26.50 E-value=43 Score=28.18 Aligned_cols=25 Identities=32% Similarity=0.263 Sum_probs=20.3
Q ss_pred CCCHHHHHHHHHHcCCcEEEEecCC
Q 018376 87 YLSPSKLVERAHCNGVKVLALTDHD 111 (357)
Q Consensus 87 ~~tp~elv~~A~~~Gl~~iaITDHd 111 (357)
+-.+-++++.|+++|.+.++||+..
T Consensus 122 t~~~i~~~~~ak~~g~~vI~IT~~~ 146 (196)
T 2yva_A 122 SRDIVKAVEAAVTRDMTIVALTGYD 146 (196)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 3455678899999999999999854
No 165
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=26.22 E-value=1.5e+02 Score=27.75 Aligned_cols=56 Identities=18% Similarity=0.160 Sum_probs=38.5
Q ss_pred CCeEEeeCCCCCCC--hHHHHHHHHHcCCcEEEeecCCC---cHHH--HHHHHHHHhcCCcee
Q 018376 264 GGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDG---KLVD--VNFLEKIDNFLLLLC 319 (357)
Q Consensus 264 GGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~---~~~~--~~~~~lA~~~~Ll~t 319 (357)
|.++|+|+-+.... .-++.+.+.+.|.||+=+..|+. +++. +.|..+|+.-+|.+.
T Consensus 102 grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~lPii 164 (332)
T 2r8w_A 102 GRRTLMAGIGALRTDEAVALAKDAEAAGADALLLAPVSYTPLTQEEAYHHFAAVAGATALPLA 164 (332)
T ss_dssp TSSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCSSCEE
T ss_pred CCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEE
Confidence 45999998775332 13455667788999999988765 2222 467888988777653
No 166
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=26.20 E-value=71 Score=28.44 Aligned_cols=46 Identities=9% Similarity=0.043 Sum_probs=34.7
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEecCCC----------CCCHHHHHHHHHhcCCeEE
Q 018376 86 GYLSPSKLVERAHCNGVKVLALTDHDT----------MSGIPEAIETARRFGMKII 131 (357)
Q Consensus 86 G~~tp~elv~~A~~~Gl~~iaITDHdt----------~~g~~~~~~~a~~~gi~vi 131 (357)
+..++++.++.+++.|++.|-+.-.+. .....++.+.+++.|+.+.
T Consensus 28 ~~~~~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~ 83 (295)
T 3cqj_A 28 AGECWLERLQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETGVRVP 83 (295)
T ss_dssp CCSCHHHHHHHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHHCCEEE
T ss_pred CCCCHHHHHHHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHcCCeEE
Confidence 458999999999999999999975432 1124567777888888753
No 167
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=26.16 E-value=32 Score=30.24 Aligned_cols=56 Identities=16% Similarity=0.073 Sum_probs=39.6
Q ss_pred eEEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCC-----CCCHHHHHHHHHhcCCeEE
Q 018376 73 VVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDT-----MSGIPEAIETARRFGMKII 131 (357)
Q Consensus 73 ~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~iaITDHdt-----~~g~~~~~~~a~~~gi~vi 131 (357)
|++-++. +.+. .+++++.++.+++.|++.|-+.-.+. -....++.+.+++.|+.+.
T Consensus 4 Mk~~~~~-~~~~--~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~~~ 64 (281)
T 3u0h_A 4 MEPCLHP-TLVD--ETSLVLYLDLARETGYRYVDVPFHWLEAEAERHGDAAVEAMFQRRGLVLA 64 (281)
T ss_dssp CEEEECG-GGTT--CCCHHHHHHHHHHTTCSEECCCHHHHHHHHHHHCHHHHHHHHHTTTCEEC
T ss_pred chhhhcc-hhcc--CCCHHHHHHHHHHcCCCEEEecHHHHHHHhcccCHHHHHHHHHHcCCceE
Confidence 5555554 3333 47899999999999999998875431 1235667778888888753
No 168
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=26.07 E-value=66 Score=30.56 Aligned_cols=43 Identities=16% Similarity=0.243 Sum_probs=32.4
Q ss_pred hHHHHHHHHHcCCcEEEeec----CCCc------HHHHHHHHHHHhcCCceee
Q 018376 278 PAAIIRKLKDVGLHGLEVYR----SDGK------LVDVNFLEKIDNFLLLLCL 320 (357)
Q Consensus 278 ~~~li~~l~~~GlDGIEv~~----~~~~------~~~~~~~~lA~~~~Ll~t~ 320 (357)
..+.++.++++|++|||++. +... .....+.++++++||-++.
T Consensus 35 l~e~l~~aa~~G~d~VEl~~~~~~~~~~~~~~~~~~~~~l~~~l~~~GL~i~~ 87 (394)
T 1xla_A 35 PVEAVHKLAELGAYGITFHDNDLIPFDATEAEREKILGDFNQALKDTGLKVPM 87 (394)
T ss_dssp HHHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHHCCBCCE
T ss_pred HHHHHHHHHHcCCCEEEecCCccCcccCCchhhHHHHHHHHHHHHHcCCeEEE
Confidence 56788899999999999986 2221 1224688999999998764
No 169
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=26.01 E-value=1.6e+02 Score=27.73 Aligned_cols=56 Identities=14% Similarity=0.134 Sum_probs=37.1
Q ss_pred cCCeEEeeCCCCCCC--hHHHHHHHHHcCCcEEEeecCCC---cHHH--HHHHHHHHhcCCce
Q 018376 263 TGGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDG---KLVD--VNFLEKIDNFLLLL 318 (357)
Q Consensus 263 aGGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~---~~~~--~~~~~lA~~~~Ll~ 318 (357)
.|.++|+|+-+.... .-++.+.+.+.|.||+=+..|+. +++. +.|..+|+.-+|.+
T Consensus 98 ~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~lPi 160 (343)
T 2v9d_A 98 DRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVADSVTLPV 160 (343)
T ss_dssp TTSSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEEECCSSSCCCHHHHHHHHHHHHHTCSSCE
T ss_pred CCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCE
Confidence 356889998775332 13345566778999999888764 2222 46778888877664
No 170
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=25.88 E-value=1e+02 Score=28.51 Aligned_cols=44 Identities=14% Similarity=0.108 Sum_probs=34.5
Q ss_pred CCHHHHHHHHHHcCCeEEeeCCCCCCChHHHHHHHHHcCCcEEEeec
Q 018376 251 PLAEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYR 297 (357)
Q Consensus 251 ~~~eevI~~I~~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~ 297 (357)
|...++++.+++.+|++++-|... ...+++.+.+.|+|++.+-+
T Consensus 217 p~~k~i~~~i~~~~g~~~i~~~~g---~~~~l~~l~~~g~d~~~~d~ 260 (338)
T 2eja_A 217 PYVNYLISELKDFSDTPVIYFFRG---SSSFIDLAVDYRADALSVDW 260 (338)
T ss_dssp HHHHHHHHHHHHHCCCCEEEEESS---HHHHHHHHTTSCCSEEECCT
T ss_pred HHHHHHHHHHhhcCCCCEEEEcCC---cHHHHHHHHHcCCCEEEeCC
Confidence 456788999998766889999742 25688999999999998744
No 171
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=25.79 E-value=1.1e+02 Score=28.38 Aligned_cols=64 Identities=9% Similarity=0.074 Sum_probs=44.3
Q ss_pred HHHHHHHHHHcCCeEEeeCCC-----CCCChHHHHHHHHHcCCcEEEeecCCCc--HHH-HHHHHHHHhcCCc
Q 018376 253 AEVAVQLIHRTGGLAVLAHPW-----ALKNPAAIIRKLKDVGLHGLEVYRSDGK--LVD-VNFLEKIDNFLLL 317 (357)
Q Consensus 253 ~eevI~~I~~aGGvaVLAHP~-----~~~~~~~li~~l~~~GlDGIEv~~~~~~--~~~-~~~~~lA~~~~Ll 317 (357)
+++.|++.|++|=-+..-..+ .....++.+++.++.|+|.||+....-. .+. .++.+.|++. +.
T Consensus 82 l~ekI~l~~~~gV~v~~GGTlfE~~l~qg~~~~yl~~~k~lGF~~IEISdGti~l~~~~~~~lI~~a~~~-f~ 153 (276)
T 1u83_A 82 LEEKISTLKEHDITFFFGGTLFEKYVSQKKVNEFHRYCTYFGCEYIEISNGTLPMTNKEKAAYIADFSDE-FL 153 (276)
T ss_dssp HHHHHHHHHHTTCEEEECHHHHHHHHHTTCHHHHHHHHHHTTCSEEEECCSSSCCCHHHHHHHHHHHTTT-SE
T ss_pred HHHHHHHHHHcCCeEeCCcHHHHHHHHcCcHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHhh-cE
Confidence 899999999998444433321 0123477899999999999999987543 333 3577777777 54
No 172
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=25.71 E-value=29 Score=31.55 Aligned_cols=34 Identities=21% Similarity=0.151 Sum_probs=25.3
Q ss_pred eEEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCC
Q 018376 73 VVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHD 111 (357)
Q Consensus 73 ~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~iaITDHd 111 (357)
|.+|-|||-.... . +.+++|++.|+..+.++-.+
T Consensus 1 m~iDtH~Hld~~~----~-~~l~~a~~~GV~~~i~~~~~ 34 (261)
T 3guw_A 1 MYFDSHLHSEGLG----F-SELVKLKENGIKEVCSLAFF 34 (261)
T ss_dssp -CCBCCCCGGGCC----H-HHHHHHHTTSCCEECCBCCC
T ss_pred CeEEeccCCCCCC----h-HHHHHHHHCCCcEEEEeccC
Confidence 4689999987532 2 35889999999998776544
No 173
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=25.68 E-value=1.4e+02 Score=27.30 Aligned_cols=55 Identities=11% Similarity=0.052 Sum_probs=36.0
Q ss_pred CCeEEeeCCCCCCC--hHHHHHHHHHcCCcEEEeecCCC---cHHH--HHHHHHHHhcCCce
Q 018376 264 GGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDG---KLVD--VNFLEKIDNFLLLL 318 (357)
Q Consensus 264 GGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~---~~~~--~~~~~lA~~~~Ll~ 318 (357)
|.++|+|+-+.... .-++.+.+.+.|.||+=+..|+. +++. +.+..+|+.-+|.+
T Consensus 68 grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPi 129 (297)
T 2rfg_A 68 GRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVAGYYNRPSQEGLYQHFKMVHDAIDIPI 129 (297)
T ss_dssp TSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCTTTCCCHHHHHHHHHHHHHHCSSCE
T ss_pred CCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCE
Confidence 45888888775332 13345566778999998887764 2222 46778888777664
No 174
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=25.41 E-value=1.8e+02 Score=25.89 Aligned_cols=52 Identities=15% Similarity=0.155 Sum_probs=37.2
Q ss_pred eeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCC---------CCCHHHHHHHHHhcCCe
Q 018376 77 LHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDT---------MSGIPEAIETARRFGMK 129 (357)
Q Consensus 77 LH~HT~~SDG~~tp~elv~~A~~~Gl~~iaITDHdt---------~~g~~~~~~~a~~~gi~ 129 (357)
|=+|+....+ .++++.++.|++.|++++-|...+. -....++.+.+++.|+.
T Consensus 8 lG~~~~~~~~-~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 68 (303)
T 3aal_A 8 IGSHVSMSGK-KMLLAASEEAASYGANTFMIYTGAPQNTKRKSIEELNIEAGRQHMQAHGIE 68 (303)
T ss_dssp EEEECCCCTT-TTHHHHHHHHHHTTCSEEEEESSCTTCCCCCCSGGGCHHHHHHHHHHTTCC
T ss_pred eceeeecCCC-ccHHHHHHHHHHcCCCEEEEcCCCCCccCCCCCCHHHHHHHHHHHHHcCCc
Confidence 4566655432 4899999999999999999943221 12466788888889884
No 175
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=25.19 E-value=1.6e+02 Score=27.08 Aligned_cols=55 Identities=11% Similarity=0.112 Sum_probs=36.0
Q ss_pred CCeEEeeCCCCCCCh--HHHHHHHHHcCCcEEEeecCCC---cHHH--HHHHHHHHhcCCce
Q 018376 264 GGLAVLAHPWALKNP--AAIIRKLKDVGLHGLEVYRSDG---KLVD--VNFLEKIDNFLLLL 318 (357)
Q Consensus 264 GGvaVLAHP~~~~~~--~~li~~l~~~GlDGIEv~~~~~---~~~~--~~~~~lA~~~~Ll~ 318 (357)
|.++|+|+-+..... -++.+.+.+.|.||+=+..|+. +++. +.|..+|+.-++.+
T Consensus 80 grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPi 141 (306)
T 1o5k_A 80 GKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYISERTDLGI 141 (306)
T ss_dssp TSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTTCSSCE
T ss_pred CCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCE
Confidence 558888887753321 3345566778999998887764 2222 46778888777654
No 176
>1x2n_A Homeobox protein pknox1; homeobox domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=24.70 E-value=1.7e+02 Score=20.59 Aligned_cols=22 Identities=5% Similarity=-0.118 Sum_probs=16.3
Q ss_pred CCCCCCCCCHHHHhHHHHHhhh
Q 018376 22 RGGGKKKMTAEQSLAFNSVTEW 43 (357)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~ 43 (357)
+++++..+|.+|...|...+..
T Consensus 7 ~rr~R~~~~~~q~~~Le~~f~~ 28 (73)
T 1x2n_A 7 GKNKRGVLPKHATNVMRSWLFQ 28 (73)
T ss_dssp SCCSSCCCCHHHHHHHHHHHHH
T ss_pred CCCCCCcCCHHHHHHHHHHHHH
Confidence 3445567999999988887754
No 177
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=24.64 E-value=2.1e+02 Score=26.16 Aligned_cols=64 Identities=9% Similarity=0.059 Sum_probs=36.6
Q ss_pred HHHHHHHcCC--eEEeeCCCCC----CChHHHHHHHH-HcCCcEEEeecCC----------CcHHHHHHHHHHHhcCCce
Q 018376 256 AVQLIHRTGG--LAVLAHPWAL----KNPAAIIRKLK-DVGLHGLEVYRSD----------GKLVDVNFLEKIDNFLLLL 318 (357)
Q Consensus 256 vI~~I~~aGG--vaVLAHP~~~----~~~~~li~~l~-~~GlDGIEv~~~~----------~~~~~~~~~~lA~~~~Ll~ 318 (357)
+.+++.+..+ +++..||... ....+.++++. +.|+.|||+.... .......+.++|.++|+.+
T Consensus 96 ~~~~~~~~p~rf~~~~~~p~~~~~~~~~a~~eL~r~~~~~g~~Gv~l~~~~~~~~~~~~~l~d~~~~p~~~~a~e~~lpv 175 (350)
T 2gwg_A 96 CYRVSQLFPDNFIGAAMLPQSPGVDPKTCIPELEKCVKEYGFVAINLNPDPSGGHWTSPPLTDRIWYPIYEKMVELEIPA 175 (350)
T ss_dssp HHHHHHHSTTTEEEEEECCCCTTSCGGGGHHHHHHHHHTSCCCEEEECSCTTSSCCCSCCTTSGGGHHHHHHHHHHTCCE
T ss_pred HHHHHHhCCCcEEEEEeCCCCCCCCHHHHHHHHHHHHhccCCeEEEECCCCCCccCCCCCCCCHHHHHHHHHHHHcCCeE
Confidence 4455555443 2445566421 12234455555 6899999985421 1111245789999999987
Q ss_pred e
Q 018376 319 C 319 (357)
Q Consensus 319 t 319 (357)
.
T Consensus 176 ~ 176 (350)
T 2gwg_A 176 M 176 (350)
T ss_dssp E
T ss_pred E
Confidence 5
No 178
>1mnm_C Protein (MAT alpha-2 transcriptional repressor); transcription regulation, transcriptional repression, DNA- binding protein; HET: DNA; 2.25A {Saccharomyces cerevisiae} SCOP: a.4.1.1
Probab=24.63 E-value=1.5e+02 Score=21.81 Aligned_cols=20 Identities=15% Similarity=-0.031 Sum_probs=15.7
Q ss_pred CCCCCCCHHHHhHHHHHhhh
Q 018376 24 GGKKKMTAEQSLAFNSVTEW 43 (357)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~ 43 (357)
+++..+|.+|...|...+.-
T Consensus 29 k~r~~ft~~q~~~Le~~f~~ 48 (87)
T 1mnm_C 29 YRGHRFTKENVRILESWFAK 48 (87)
T ss_dssp CTTCCCCHHHHHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHHHH
Confidence 34668999999998887764
No 179
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=24.62 E-value=1.1e+02 Score=26.98 Aligned_cols=58 Identities=21% Similarity=0.331 Sum_probs=42.8
Q ss_pred ceEEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcCCeEEEEEEEEe
Q 018376 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVEIST 138 (357)
Q Consensus 72 ~~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vi~GiEis~ 138 (357)
...+|.|++. .+|+.+++.+.+.|.+.+.+-- .......+..+.+++.|++ .|+-+..
T Consensus 64 ~~~~dvhLmv------~~p~~~i~~~~~aGad~itvH~-Ea~~~~~~~i~~i~~~G~k--~gval~p 121 (228)
T 3ovp_A 64 DPFFDMHMMV------SKPEQWVKPMAVAGANQYTFHL-EATENPGALIKDIRENGMK--VGLAIKP 121 (228)
T ss_dssp SSCEEEEEEC------SCGGGGHHHHHHHTCSEEEEEG-GGCSCHHHHHHHHHHTTCE--EEEEECT
T ss_pred CCcEEEEEEe------CCHHHHHHHHHHcCCCEEEEcc-CCchhHHHHHHHHHHcCCC--EEEEEcC
Confidence 4678999996 5778899999999999999833 2233456677778888876 4666653
No 180
>3mpg_A Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus anthracis}
Probab=24.38 E-value=81 Score=29.82 Aligned_cols=55 Identities=7% Similarity=0.011 Sum_probs=36.7
Q ss_pred eEEceeeeCcCC--CCCCCHHHHHHHHHHcCCcEEEEecCCCCC-----CHHHHHHHHHhcC
Q 018376 73 VVFELHSHSNFS--DGYLSPSKLVERAHCNGVKVLALTDHDTMS-----GIPEAIETARRFG 127 (357)
Q Consensus 73 ~~~DLH~HT~~S--DG~~tp~elv~~A~~~Gl~~iaITDHdt~~-----g~~~~~~~a~~~g 127 (357)
-++|.|+|...+ ....+.....+.|.+.|+..+..+-+.... .+..+.+.+++.+
T Consensus 54 G~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (428)
T 3mpg_A 54 GLVDVHVHLREPGGEHKETIETGTLAAAKGGFTTICAMPNTRPVPDCREHMEDLQNRIKEKA 115 (428)
T ss_dssp CEEEEEECCCTTTCTTTCCHHHHHHHHHHHTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHC
T ss_pred CEEEEeeccCCCCCCchhHHHHHHHHHHhCCeEEEEeCCCCCCCCCcHHHHHHHHHHhcccC
Confidence 589999998654 234567788999999999988876542211 2344455555555
No 181
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=24.26 E-value=1.2e+02 Score=26.99 Aligned_cols=47 Identities=15% Similarity=0.197 Sum_probs=34.9
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEecCCCCCC----HHHHHHHHHhcCCeEE
Q 018376 85 DGYLSPSKLVERAHCNGVKVLALTDHDTMSG----IPEAIETARRFGMKII 131 (357)
Q Consensus 85 DG~~tp~elv~~A~~~Gl~~iaITDHdt~~g----~~~~~~~a~~~gi~vi 131 (357)
+|.++++++.+...+...+.+.++..++..| +.++.++|++.|+.++
T Consensus 108 ~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li 158 (353)
T 2yrr_A 108 GEPVDPEAVARALKRRRYRMVALVHGETSTGVLNPAEAIGALAKEAGALFF 158 (353)
T ss_dssp TSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHHHHTCEEE
T ss_pred CCCCCHHHHHHHHHhCCCCEEEEEccCCCcceecCHHHHHHHHHHcCCeEE
Confidence 5678899876665554778888887776655 5778888988887655
No 182
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=24.03 E-value=67 Score=28.02 Aligned_cols=56 Identities=18% Similarity=0.223 Sum_probs=40.0
Q ss_pred eEEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCC-------------CC--CHHHHHHHHHhcCCeEE
Q 018376 73 VVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDT-------------MS--GIPEAIETARRFGMKII 131 (357)
Q Consensus 73 ~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~iaITDHdt-------------~~--g~~~~~~~a~~~gi~vi 131 (357)
|++=+.+.|.. ..++++.++.+++.|++.|=+...+. +. ...++.+.+++.|+.+.
T Consensus 10 mklg~~~~~~~---~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~ 80 (262)
T 3p6l_A 10 WRLGMQSYSFH---LFPLTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIV 80 (262)
T ss_dssp EEEEEEGGGGT---TSCHHHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEE
T ss_pred cEEEEEecccC---CCCHHHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEE
Confidence 66666555543 35899999999999999999985321 11 24667778888998754
No 183
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=23.43 E-value=46 Score=27.66 Aligned_cols=23 Identities=13% Similarity=0.118 Sum_probs=18.7
Q ss_pred CCHHHHHHHHHHcCCcEEEEecC
Q 018376 88 LSPSKLVERAHCNGVKVLALTDH 110 (357)
Q Consensus 88 ~tp~elv~~A~~~Gl~~iaITDH 110 (357)
-..-++++.|+++|.+.++||+.
T Consensus 124 ~~~~~~~~~ak~~g~~vi~iT~~ 146 (188)
T 1tk9_A 124 PNVLEALKKAKELNMLCLGLSGK 146 (188)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEG
T ss_pred HHHHHHHHHHHHCCCEEEEEeCC
Confidence 34556788899999999999985
No 184
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=23.33 E-value=98 Score=24.65 Aligned_cols=38 Identities=13% Similarity=-0.051 Sum_probs=29.6
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcCCeEE
Q 018376 91 SKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKII 131 (357)
Q Consensus 91 ~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vi 131 (357)
.+++++|.+.|.+.+-++-= .. -+++.+.|++.||+++
T Consensus 72 ~~~v~e~~~~g~k~v~~~~G-~~--~~e~~~~a~~~Girvv 109 (122)
T 3ff4_A 72 LSEYNYILSLKPKRVIFNPG-TE--NEELEEILSENGIEPV 109 (122)
T ss_dssp GGGHHHHHHHCCSEEEECTT-CC--CHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHhcCCCEEEECCC-CC--hHHHHHHHHHcCCeEE
Confidence 35789999999999877531 11 2788999999999988
No 185
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=23.10 E-value=28 Score=31.08 Aligned_cols=56 Identities=7% Similarity=-0.029 Sum_probs=36.4
Q ss_pred ceEEceeeeCcCCC------------CCCCHHHHHHHHHHcCCcEEEEecCCC-CCCHHHHHHHHHhcC
Q 018376 72 NVVFELHSHSNFSD------------GYLSPSKLVERAHCNGVKVLALTDHDT-MSGIPEAIETARRFG 127 (357)
Q Consensus 72 ~~~~DLH~HT~~SD------------G~~tp~elv~~A~~~Gl~~iaITDHdt-~~g~~~~~~~a~~~g 127 (357)
.+.||.|+|-.... ...+++++++.+.+.|++...+.--+. ......+.+.+++..
T Consensus 12 ~~iID~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~l~~m~~~GV~~~v~~~~~~~~~~n~~~~~~~~~~p 80 (288)
T 2ffi_A 12 LTAIDSHAHVFSRGLNLASQRRYAPNYDAPLGDYLGQLRAHGFSHGVLVQPSFLGTDNRYLLSALQTVP 80 (288)
T ss_dssp CCCEEBCCCCBCHHHHHHTTCCSSCCSCBCHHHHHHHHHHTSCCEECCBCCGGGTTCCHHHHHHHHHST
T ss_pred CCceeecccccCCCCCCCCcccCCCCCCCCHHHHHHHHHHhCCCeEEEECCccccccHHHHHHHHHHCC
Confidence 36899999975321 147899999999999999776654211 112344555565543
No 186
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=23.09 E-value=54 Score=27.23 Aligned_cols=24 Identities=25% Similarity=-0.009 Sum_probs=20.1
Q ss_pred CCHHHHHHHHHHcCCcEEEEecCC
Q 018376 88 LSPSKLVERAHCNGVKVLALTDHD 111 (357)
Q Consensus 88 ~tp~elv~~A~~~Gl~~iaITDHd 111 (357)
-..-++++.|+++|.+.++||+..
T Consensus 93 ~~~~~~~~~ak~~g~~vi~IT~~~ 116 (186)
T 1m3s_A 93 KSLIHTAAKAKSLHGIVAALTINP 116 (186)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESCT
T ss_pred HHHHHHHHHHHHCCCEEEEEECCC
Confidence 345568999999999999999964
No 187
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=23.08 E-value=1e+02 Score=28.40 Aligned_cols=57 Identities=14% Similarity=0.072 Sum_probs=39.1
Q ss_pred cCCeEEeeCCCCCCC--hHHHHHHHHHcCCcEEEeecCCC---cHHH--HHHHHHHHhcCCcee
Q 018376 263 TGGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDG---KLVD--VNFLEKIDNFLLLLC 319 (357)
Q Consensus 263 aGGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~---~~~~--~~~~~lA~~~~Ll~t 319 (357)
.|.++|+|+-+.... .-++.+.+.+.|.||+=+..|+. +++. +.+..+|+.-+|.+.
T Consensus 71 ~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPii 134 (300)
T 3eb2_A 71 QRRVPVVAGVASTSVADAVAQAKLYEKLGADGILAILEAYFPLKDAQIESYFRAIADAVEIPVV 134 (300)
T ss_dssp TTSSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEEECCSSCCCHHHHHHHHHHHHHHCSSCEE
T ss_pred CCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHHCCCCEE
Confidence 456899998764321 23455667888999999988764 2222 468888988777653
No 188
>3mdu_A N-formimino-L-glutamate iminohydrolase; amonohydralase family, N-formimino-L-glutamate iminohydrolas guanidino-L-glutamate; HET: NGQ; 1.40A {Pseudomonas aeruginosa} PDB: 3mdw_A*
Probab=23.05 E-value=1.6e+02 Score=28.04 Aligned_cols=61 Identities=23% Similarity=0.208 Sum_probs=37.9
Q ss_pred eEEceeeeCcCC--CC------------------------CCCHHHHH-------HHHHHcCCcEEEE--ecCCCCCC--
Q 018376 73 VVFELHSHSNFS--DG------------------------YLSPSKLV-------ERAHCNGVKVLAL--TDHDTMSG-- 115 (357)
Q Consensus 73 ~~~DLH~HT~~S--DG------------------------~~tp~elv-------~~A~~~Gl~~iaI--TDHdt~~g-- 115 (357)
-+||.|+|...+ .| .++|+++. .++.+.|...+.. +-|....|
T Consensus 51 GfId~H~H~~~~~~rg~~~~~~~~~~~l~~wl~~~~~~~~~~~~e~~~~~a~~~~~e~l~~GvTtv~d~~~~~~~~~g~~ 130 (453)
T 3mdu_A 51 GMPNLHSHAFQRAMAGLAEVAGNPNDSFWTWRELMYRMVARLSPEQIEVIACQLYIEMLKAGYTAVAEFHYVHHDLDGRS 130 (453)
T ss_dssp CEEEEEECGGGGGGTTTTCCCSSTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTEEEEEEEECCCSCTTSCC
T ss_pred cceecccchHHHhhccccccccCCCCcHHHHHHHHhhhhhhCCHHHHHHHHHHHHHHHHHcCCcEEEEeeEecccccccc
Confidence 699999998543 22 24666653 3366789887663 22432222
Q ss_pred -------HHHHHHHHHhcCCeEEEE
Q 018376 116 -------IPEAIETARRFGMKIIPG 133 (357)
Q Consensus 116 -------~~~~~~~a~~~gi~vi~G 133 (357)
...+.+.+++.|++.+.+
T Consensus 131 ~~~~~~~~~~~~~a~~~~Gir~~~~ 155 (453)
T 3mdu_A 131 YADPAELSLRISRAASAAGIGLTLL 155 (453)
T ss_dssp CSSTTHHHHHHHHHHHHHTCEEEEE
T ss_pred ccchhhHHHHHHHHHHHhCCeEEEe
Confidence 345667778889987765
No 189
>1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A
Probab=22.91 E-value=1.9e+02 Score=26.91 Aligned_cols=47 Identities=19% Similarity=0.340 Sum_probs=39.6
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcCCeEEEEEEE
Q 018376 85 DGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVEI 136 (357)
Q Consensus 85 DG~~tp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vi~GiEi 136 (357)
|-..+|+++++..+..|++.|=|=|-| +...++++..||+++.|+-.
T Consensus 10 ~nlp~~~~vv~llk~~~i~~VRlY~~d-----~~vL~A~~~tgi~v~lgv~n 56 (306)
T 1aq0_A 10 NNLPAASTVVSMFKSNGIKSMRLYAPN-----QAALQAVGGTGINVVVGAPN 56 (306)
T ss_dssp SSCCCHHHHHHHHHHHTCCEEEESSCC-----HHHHHHHTTSCCEEEEEECG
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEcCCC-----HHHHHHHHhcCCEEEEeccc
Confidence 446799999999999999999998755 56777778899999999874
No 190
>1wi3_A DNA-binding protein SATB2; homeodomain, helix-turn-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=22.88 E-value=70 Score=23.52 Aligned_cols=26 Identities=19% Similarity=0.064 Sum_probs=21.2
Q ss_pred CCCCCCCHHHHhHHHHHhhhhccCCC
Q 018376 24 GGKKKMTAEQSLAFNSVTEWVYLDQS 49 (357)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 49 (357)
+-+-.+|.+|...|++-++-|++.+|
T Consensus 9 R~RT~~s~eQL~~Lqs~f~~~~~yPd 34 (71)
T 1wi3_A 9 RSRTKISLEALGILQSFIHDVGLYPD 34 (71)
T ss_dssp CCCCCCCSHHHHHHHHHHHHHCSCCC
T ss_pred CCCccCCHHHHHHHHHHHHhcCCCCC
Confidence 34457899999999999999877654
No 191
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=22.88 E-value=1.7e+02 Score=27.14 Aligned_cols=54 Identities=13% Similarity=0.017 Sum_probs=38.2
Q ss_pred CCeEEeeCCCCCCChH---HHHHHHHHcCCcEEEeecCCC---cHHH--HHHHHHHHhcCCcee
Q 018376 264 GGLAVLAHPWALKNPA---AIIRKLKDVGLHGLEVYRSDG---KLVD--VNFLEKIDNFLLLLC 319 (357)
Q Consensus 264 GGvaVLAHP~~~~~~~---~li~~l~~~GlDGIEv~~~~~---~~~~--~~~~~lA~~~~Ll~t 319 (357)
|.++|+|+-+. +.. ++.+.+.+.|.||+=+..|+. +++. +.|..+|+.-+|.+.
T Consensus 80 grvpViaGvg~--~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPii 141 (316)
T 3e96_A 80 GRALVVAGIGY--ATSTAIELGNAAKAAGADAVMIHMPIHPYVTAGGVYAYFRDIIEALDFPSL 141 (316)
T ss_dssp TSSEEEEEECS--SHHHHHHHHHHHHHHTCSEEEECCCCCSCCCHHHHHHHHHHHHHHHTSCEE
T ss_pred CCCcEEEEeCc--CHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEE
Confidence 56999999873 333 345567788999999987764 2232 468888888777654
No 192
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=22.82 E-value=1.4e+02 Score=27.84 Aligned_cols=57 Identities=12% Similarity=-0.114 Sum_probs=37.1
Q ss_pred cCCeEEeeCCCCCCC--hHHHHHHHHHcCCcEEEeecC-CCc----HHH--HHHHHHHHhcCCcee
Q 018376 263 TGGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRS-DGK----LVD--VNFLEKIDNFLLLLC 319 (357)
Q Consensus 263 aGGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~-~~~----~~~--~~~~~lA~~~~Ll~t 319 (357)
.|.++|+|+-+.... .-++.+.+.+.|.||+=+..| |.. ++. ..|..+|+.-+|.+.
T Consensus 78 ~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~kp~~~~~l~~~f~~ia~a~~lPii 143 (318)
T 3qfe_A 78 GPDFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLPPAYFGKATTPPVIKSFFDDVSCQSPLPVV 143 (318)
T ss_dssp CTTSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCC---CCCHHHHHHHHHHHHHHCSSCEE
T ss_pred CCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCCHHHHHHHHHHHHhhCCCCEE
Confidence 456899998775331 134556677889999999887 332 222 467788888776653
No 193
>2xij_A Methylmalonyl-COA mutase, mitochondrial; isomerase, organic aciduria, vitamin B12; HET: B12 5AD BTB; 1.95A {Homo sapiens} PDB: 2xiq_A* 3bic_A
Probab=22.80 E-value=1.2e+02 Score=32.19 Aligned_cols=47 Identities=17% Similarity=0.333 Sum_probs=35.7
Q ss_pred CCCHHHHHHHHHHcCCcEEEEecCCCCC--CHHHHHHHHHhcCC---eEEEE
Q 018376 87 YLSPSKLVERAHCNGVKVLALTDHDTMS--GIPEAIETARRFGM---KIIPG 133 (357)
Q Consensus 87 ~~tp~elv~~A~~~Gl~~iaITDHdt~~--g~~~~~~~a~~~gi---~vi~G 133 (357)
..+|+++++.|++.+.+.|+++=.++.. ..++..+..++.|+ .++.|
T Consensus 641 ~v~~eeiv~aA~e~~adiVglSsl~~~~~~~~~~vi~~Lr~~G~~dv~VivG 692 (762)
T 2xij_A 641 FQTPREVAQQAVDADVHAVGVSTLAAGHKTLVPELIKELNSLGRPDILVMCG 692 (762)
T ss_dssp TCCHHHHHHHHHHTTCSEEEEEECSSCHHHHHHHHHHHHHHTTCTTSEEEEE
T ss_pred CCCHHHHHHHHHHcCCCEEEEeeecHHHHHHHHHHHHHHHhcCCCCCEEEEe
Confidence 4799999999999999999999776543 34556666666554 67766
No 194
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=22.80 E-value=2.6e+02 Score=23.97 Aligned_cols=49 Identities=16% Similarity=0.226 Sum_probs=34.3
Q ss_pred eeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecC--CCCCCHHHHHHHHHhcCCeEE
Q 018376 78 HSHSNFSDGYLSPSKLVERAHCNGVKVLALTDH--DTMSGIPEAIETARRFGMKII 131 (357)
Q Consensus 78 H~HT~~SDG~~tp~elv~~A~~~Gl~~iaITDH--dt~~g~~~~~~~a~~~gi~vi 131 (357)
.+|....| |++.++.|.+.|.+.+.+-+- .+ ....++.+.+++.|+.++
T Consensus 72 ~v~l~vnd----~~~~v~~~~~~Gad~v~vh~~~~~~-~~~~~~~~~~~~~g~~ig 122 (230)
T 1rpx_A 72 DVHLMIVE----PDQRVPDFIKAGADIVSVHCEQSST-IHLHRTINQIKSLGAKAG 122 (230)
T ss_dssp EEEEESSS----HHHHHHHHHHTTCSEEEEECSTTTC-SCHHHHHHHHHHTTSEEE
T ss_pred EEEEEecC----HHHHHHHHHHcCCCEEEEEecCccc-hhHHHHHHHHHHcCCcEE
Confidence 34445555 888999999999999987664 33 345667777777776533
No 195
>2djn_A Homeobox protein DLX-5; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.74 E-value=1.8e+02 Score=20.35 Aligned_cols=21 Identities=10% Similarity=-0.095 Sum_probs=16.3
Q ss_pred CCCCCCCCHHHHhHHHHHhhh
Q 018376 23 GGGKKKMTAEQSLAFNSVTEW 43 (357)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~ 43 (357)
++.+..+|.+|...|...++-
T Consensus 8 rr~Rt~ft~~Q~~~Le~~F~~ 28 (70)
T 2djn_A 8 RKPRTIYSSFQLAALQRRFQK 28 (70)
T ss_dssp CCSSCSSCHHHHHHHHHHHTT
T ss_pred CCCCCCCCHHHHHHHHHHHcC
Confidence 445567999999999988753
No 196
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=22.60 E-value=1.4e+02 Score=27.32 Aligned_cols=55 Identities=16% Similarity=0.143 Sum_probs=33.6
Q ss_pred CCeEEeeCCCCCCCh--HHHHHHHHHcCCcEEEeecCCC---cHHH--HHHHHHHHhcCCce
Q 018376 264 GGLAVLAHPWALKNP--AAIIRKLKDVGLHGLEVYRSDG---KLVD--VNFLEKIDNFLLLL 318 (357)
Q Consensus 264 GGvaVLAHP~~~~~~--~~li~~l~~~GlDGIEv~~~~~---~~~~--~~~~~lA~~~~Ll~ 318 (357)
|.++|+|+-+..... -++.+.+.+.|.||+=+..|+. +++. +.+..+|+.-++.+
T Consensus 69 gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPi 130 (292)
T 2ojp_A 69 GRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEHTDLPQ 130 (292)
T ss_dssp TSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEECCCSSCCCHHHHHHHHHHHHTTCSSCE
T ss_pred CCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCE
Confidence 458888887653311 2344445667888888877764 2222 35677787766654
No 197
>1914_A Signal recognition particle 9/14 fusion protein; ALU domain, RNA binding, signal recognition particle (SRP), translation regulation; 2.53A {Mus musculus} SCOP: d.49.1.1 d.49.1.1 PDB: 1e8o_A* 1e8s_A 1ry1_C*
Probab=22.55 E-value=11 Score=34.10 Aligned_cols=26 Identities=38% Similarity=0.653 Sum_probs=7.0
Q ss_pred hhhhhhHHhhhhhcCCCCCCCCCHHH
Q 018376 8 EKRSKDKKKKKKQKRGGGKKKMTAEQ 33 (357)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 33 (357)
.+++++||||+++++++.+++++.++
T Consensus 114 KKrdKKkkKk~~~~~k~~~~~~~~~~ 139 (232)
T 1914_A 114 KKRDKKNKSKKSKPAQGGEQKLISEE 139 (232)
T ss_dssp BCC-----------CCEEEEEC----
T ss_pred Cccccchhhhhhhhhhhhhhhhhhhh
Confidence 34556666666666666667777665
No 198
>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A
Probab=22.54 E-value=81 Score=28.59 Aligned_cols=56 Identities=13% Similarity=0.007 Sum_probs=36.8
Q ss_pred ceEEceeeeCcC------C---------CCCCCHHHHHHHHHHcCCcEEEEecCCCCC-CHHHHHHHHHhcC
Q 018376 72 NVVFELHSHSNF------S---------DGYLSPSKLVERAHCNGVKVLALTDHDTMS-GIPEAIETARRFG 127 (357)
Q Consensus 72 ~~~~DLH~HT~~------S---------DG~~tp~elv~~A~~~Gl~~iaITDHdt~~-g~~~~~~~a~~~g 127 (357)
+|.+|-|+|-.- . ....+++++++.+.+.|++...+.--+... ....+.+.+++.+
T Consensus 3 ~m~iD~H~H~~~~~~~~~pw~~~~~~~~~~~~~~~~ll~~~~~~GV~~~V~v~~~~~~~~n~~l~~la~~~p 74 (303)
T 4do7_A 3 ALRIDSHQHFWRYRAADYPWIGAGMGVLARDYLPDALHPLMHAQALGASIAVQARAGRDETAFLLELACDEA 74 (303)
T ss_dssp CCCEEEEECCBCCCGGGCTTCCTTCGGGSSCBCHHHHHHHHHHTTCCEEEEECCSSSHHHHHHHHHHHTTCT
T ss_pred CcEEeCCEecccCCCCCCCCCCCccccccCCCCHHHHHHHHHhcCCcEEEEEccCCcHHHHHHHHHHHHhCC
Confidence 367999999741 1 125799999999999999988876543211 1233455555443
No 199
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=22.32 E-value=1.1e+02 Score=28.15 Aligned_cols=54 Identities=20% Similarity=0.243 Sum_probs=38.3
Q ss_pred HHHHHHHHHcCCeEEeeCCCCCCChHHHHHHHHHcCCcEEEeecCCCcHHHHHHHHHHHhcCCc
Q 018376 254 EVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDGKLVDVNFLEKIDNFLLL 317 (357)
Q Consensus 254 eevI~~I~~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~~~~~~~~~~~lA~~~~Ll 317 (357)
.+.|+.+|++ |+.|.+. ...+ .+.+..+.++|+|||=.-+|. .+.++.++.||.
T Consensus 258 ~~~v~~~~~~-Gl~V~~W--TVn~-~~~~~~l~~~GVDgIiTD~P~------~~~~~l~~~g~~ 311 (313)
T 3l12_A 258 PELVAEAHDL-GLIVLTW--TVNE-PEDIRRMATTGVDGIVTDYPG------RTQRILIDMGLS 311 (313)
T ss_dssp HHHHHHHHHT-TCEEEEB--CCCS-HHHHHHHHHHTCSEEEESCHH------HHHHHHHHTTCB
T ss_pred HHHHHHHHHC-CCEEEEE--cCCC-HHHHHHHHHcCCCEEEeCCHH------HHHHHHHhcCcC
Confidence 5789999988 5777664 3343 456888999999999765532 256677777763
No 200
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=22.32 E-value=83 Score=28.51 Aligned_cols=48 Identities=25% Similarity=0.458 Sum_probs=36.9
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEecCCCCCC----HHHHHHHHHhcCCeEEE
Q 018376 85 DGYLSPSKLVERAHCNGVKVLALTDHDTMSG----IPEAIETARRFGMKIIP 132 (357)
Q Consensus 85 DG~~tp~elv~~A~~~Gl~~iaITDHdt~~g----~~~~~~~a~~~gi~vi~ 132 (357)
+|.++++++.+...+.+.+.+.++..++..| +.++.++|++.|+.+|.
T Consensus 111 ~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~ 162 (384)
T 3zrp_A 111 GDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREPVKDVINKIRKYVELIVV 162 (384)
T ss_dssp TCCCCHHHHHHHHHHSCEEEEEEESEETTTTEECCHHHHHHHHGGGEEEEEE
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECcHHHHHHHHHhcCCEEEE
Confidence 5678999987777765788999987766665 57888899988776553
No 201
>2dmq_A LIM/homeobox protein LHX9; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.25 E-value=1.7e+02 Score=20.98 Aligned_cols=22 Identities=9% Similarity=-0.056 Sum_probs=17.0
Q ss_pred CCCCCCCCCHHHHhHHHHHhhh
Q 018376 22 RGGGKKKMTAEQSLAFNSVTEW 43 (357)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~ 43 (357)
+++++..+|.+|...|...++-
T Consensus 7 ~rr~Rt~ft~~Q~~~Le~~F~~ 28 (80)
T 2dmq_A 7 GKRMRTSFKHHQLRTMKSYFAI 28 (80)
T ss_dssp CCCCCCCCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHH
Confidence 3445668999999999988863
No 202
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=22.21 E-value=2.9e+02 Score=24.24 Aligned_cols=62 Identities=11% Similarity=-0.019 Sum_probs=44.9
Q ss_pred CHHHHHHHHHHcCCeEEeeCCCCCCChHHHHHHHHHcCCcEEEeecCCCcHHHHHHHHHHHhcC
Q 018376 252 LAEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDGKLVDVNFLEKIDNFL 315 (357)
Q Consensus 252 ~~eevI~~I~~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~~~~~~~~~~~lA~~~~ 315 (357)
+..++++.+.+.+=++|+-... .....++++.+.+.|++.||+-...... .+.+.++++++.
T Consensus 6 ~~~~~~~~l~~~~ii~vir~~~-~~~~~~~~~al~~gGv~~iel~~k~~~~-~~~i~~l~~~~~ 67 (224)
T 1vhc_A 6 TTQQIIEKLRELKIVPVIALDN-ADDILPLADTLAKNGLSVAEITFRSEAA-ADAIRLLRANRP 67 (224)
T ss_dssp CHHHHHHHHHHHCEEEEECCSS-GGGHHHHHHHHHHTTCCEEEEETTSTTH-HHHHHHHHHHCT
T ss_pred chHHHHHHHHHCCeEEEEeCCC-HHHHHHHHHHHHHcCCCEEEEeccCchH-HHHHHHHHHhCc
Confidence 4567889999999999988642 2333567888999999999997543222 224667899884
No 203
>1wdp_A Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.27A {Glycine max} SCOP: c.1.8.1 PDB: 1bfn_A* 1q6c_A 1wdr_A* 1v3i_A* 1v3h_A* 1q6d_A* 1q6g_A* 1wdq_A* 1wds_A* 1q6e_A* 1q6f_A* 2dqx_A 1byb_A* 1bya_A* 1byc_A* 1byd_A* 1uko_A 1ukp_A 1btc_A*
Probab=22.18 E-value=2e+02 Score=28.84 Aligned_cols=40 Identities=20% Similarity=0.280 Sum_probs=28.4
Q ss_pred HHHHHHHHHcCCcEEEee--cC----CCc-----HHHHHHHHHHHhcCCce
Q 018376 279 AAIIRKLKDVGLHGLEVY--RS----DGK-----LVDVNFLEKIDNFLLLL 318 (357)
Q Consensus 279 ~~li~~l~~~GlDGIEv~--~~----~~~-----~~~~~~~~lA~~~~Ll~ 318 (357)
..-+..|+.+|+|||+|- -. ..+ .-...+.+++++.||..
T Consensus 36 ~~~L~~LK~~GVdGVmvDVWWGiVE~~~P~~YdWsgY~~l~~mv~~~GLKl 86 (495)
T 1wdp_A 36 KEQLLQLRAAGVDGVMVDVWWGIIELKGPKQYDWRAYRSLLQLVQECGLTL 86 (495)
T ss_dssp HHHHHHHHHTTCCEEEEEEEHHHHTCSSTTCCCCHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHcCCCEEEEEeEeeeeccCCCCccCcHHHHHHHHHHHHcCCeE
Confidence 345778999999999873 21 111 12356899999999985
No 204
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=22.14 E-value=62 Score=29.47 Aligned_cols=46 Identities=20% Similarity=0.360 Sum_probs=36.5
Q ss_pred CCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcCCeEEEEE
Q 018376 88 LSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGV 134 (357)
Q Consensus 88 ~tp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vi~Gi 134 (357)
+-++.+++.|++.|++++-|-|= .+.-..++.+.+++.|+.+|+=+
T Consensus 103 ~G~e~F~~~~~~aGvdG~IipDL-P~eE~~~~~~~~~~~Gl~~I~lv 148 (252)
T 3tha_A 103 YGLEKFVKKAKSLGICALIVPEL-SFEESDDLIKECERYNIALITLV 148 (252)
T ss_dssp HCHHHHHHHHHHTTEEEEECTTC-CGGGCHHHHHHHHHTTCEECEEE
T ss_pred hhHHHHHHHHHHcCCCEEEeCCC-CHHHHHHHHHHHHHcCCeEEEEe
Confidence 34789999999999999999994 34446778888999998876544
No 205
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=22.14 E-value=1.2e+02 Score=27.91 Aligned_cols=48 Identities=17% Similarity=0.239 Sum_probs=37.5
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEecCCCCCC----HHHHHHHHHhcCCeEEE
Q 018376 85 DGYLSPSKLVERAHCNGVKVLALTDHDTMSG----IPEAIETARRFGMKIIP 132 (357)
Q Consensus 85 DG~~tp~elv~~A~~~Gl~~iaITDHdt~~g----~~~~~~~a~~~gi~vi~ 132 (357)
+|.++++++.+...+...+.+.++..++..| +.++.++|++.|+.++.
T Consensus 120 ~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~ 171 (416)
T 3isl_A 120 GTVFDPEDIIREIKKVKPKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIV 171 (416)
T ss_dssp TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCHHHHHHHHHTTCEEEE
T ss_pred CCCCCHHHHHHHHhhCCCcEEEEEccCCCCceecCHHHHHHHHHHcCCEEEE
Confidence 6778999987776656789999998666555 57888999999987764
No 206
>1wh5_A ZF-HD homeobox family protein; structural genomics, zinc finger homeobox family protein, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: a.4.1.1
Probab=22.06 E-value=2.2e+02 Score=20.65 Aligned_cols=22 Identities=27% Similarity=0.293 Sum_probs=17.1
Q ss_pred CCCCCCCCHHHHhHHHHHhhhh
Q 018376 23 GGGKKKMTAEQSLAFNSVTEWV 44 (357)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~ 44 (357)
++++-.+|.+|...|...++-+
T Consensus 18 rR~Rt~ft~~Ql~~Le~~f~~~ 39 (80)
T 1wh5_A 18 KRHRTKFTAEQKERMLALAERI 39 (80)
T ss_dssp CCCSCCCCHHHHHHHHHHHHHH
T ss_pred CCCCccCCHHHHHHHHHHHHhc
Confidence 3455679999999999987753
No 207
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=21.96 E-value=1.6e+02 Score=26.80 Aligned_cols=45 Identities=18% Similarity=0.127 Sum_probs=35.7
Q ss_pred CCCHHHHHHHHHHc-CCcEEEEecCC-CCCCHHHHHHHHHhcCCeEE
Q 018376 87 YLSPSKLVERAHCN-GVKVLALTDHD-TMSGIPEAIETARRFGMKII 131 (357)
Q Consensus 87 ~~tp~elv~~A~~~-Gl~~iaITDHd-t~~g~~~~~~~a~~~gi~vi 131 (357)
..++++.++.|.+. |+++|-|.--. ......++.+++++.|+.+.
T Consensus 32 ~~~~~e~l~~aa~~~G~~~VEl~~~~~~~~~~~~l~~~l~~~Gl~i~ 78 (333)
T 3ktc_A 32 ALSTIDQINAAKEVGELSYVDLPYPFTPGVTLSEVKDALKDAGLKAI 78 (333)
T ss_dssp CCCHHHHHHHHHHHSSEEEEEEEESCSTTCCHHHHHHHHHHHTCEEE
T ss_pred CCCHHHHHHHHHHhCCCCEEEecCCCcchhHHHHHHHHHHHcCCeEE
Confidence 57899999999999 99999985222 13457888889999998763
No 208
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=21.90 E-value=1e+02 Score=28.13 Aligned_cols=43 Identities=19% Similarity=0.306 Sum_probs=32.4
Q ss_pred CHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcCCeEEE
Q 018376 89 SPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIP 132 (357)
Q Consensus 89 tp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vi~ 132 (357)
..+..++.|.+.|++++-|.|-- ..-..++.+.++++|+.+|+
T Consensus 113 g~~~f~~~~~~aGvdGvIipDlp-~ee~~~~~~~~~~~gl~~I~ 155 (271)
T 3nav_A 113 GIDDFYQRCQKAGVDSVLIADVP-TNESQPFVAAAEKFGIQPIF 155 (271)
T ss_dssp CHHHHHHHHHHHTCCEEEETTSC-GGGCHHHHHHHHHTTCEEEE
T ss_pred hHHHHHHHHHHCCCCEEEECCCC-HHHHHHHHHHHHHcCCeEEE
Confidence 46889999999999999888743 23356777888888877544
No 209
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=21.87 E-value=2.5e+02 Score=29.53 Aligned_cols=69 Identities=10% Similarity=0.148 Sum_probs=46.6
Q ss_pred CCCHHHHHHHHHHcCCeEEeeCC-CCC------CChHHHHHHHHHcCCcEEEeecC-----CCc----HHH----HHHHH
Q 018376 250 EPLAEVAVQLIHRTGGLAVLAHP-WAL------KNPAAIIRKLKDVGLHGLEVYRS-----DGK----LVD----VNFLE 309 (357)
Q Consensus 250 ~~~~eevI~~I~~aGGvaVLAHP-~~~------~~~~~li~~l~~~GlDGIEv~~~-----~~~----~~~----~~~~~ 309 (357)
..+++|+++..++-| |-++-|- ..- ...++.++.+.+.|+.||=+=+= +.. +.. ..+++
T Consensus 417 d~Dl~eL~~YA~sKG-V~iilw~~t~~~~~n~e~~~d~~f~~~~~~Gv~GVKvdF~g~~~~r~~~h~~Q~~v~~Y~~i~~ 495 (738)
T 2d73_A 417 DFDVKEIHRYAARKG-IKMMMHHETSASVRNYERHMDKAYQFMADNGYNSVKSGYVGNIIPRGEHHYGQWMNNHYLYAVK 495 (738)
T ss_dssp TCCHHHHHHHHHHTT-CEEEEEEECTTBHHHHHHHHHHHHHHHHHTTCCEEEEECCSSCBSTTCCTTSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhCC-CEEEEEEcCCCchhhHHHHHHHHHHHHHHcCCCEEEeCccccCcCCcccccchHHHHHHHHHHH
Confidence 356899999998876 5444442 221 11255777789999999999432 222 322 35788
Q ss_pred HHHhcCCcee
Q 018376 310 KIDNFLLLLC 319 (357)
Q Consensus 310 lA~~~~Ll~t 319 (357)
-|.+|+|++-
T Consensus 496 ~AA~~~LmVn 505 (738)
T 2d73_A 496 KAADYKIMVN 505 (738)
T ss_dssp HHHHTTCEEE
T ss_pred HHHHcCcEEE
Confidence 9999999984
No 210
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=21.80 E-value=59 Score=27.19 Aligned_cols=24 Identities=13% Similarity=0.191 Sum_probs=19.2
Q ss_pred CCHHHHHHHHHHcCCcEEEEecCC
Q 018376 88 LSPSKLVERAHCNGVKVLALTDHD 111 (357)
Q Consensus 88 ~tp~elv~~A~~~Gl~~iaITDHd 111 (357)
-..-++++.|+++|.+.++||+..
T Consensus 130 ~~~~~~~~~ak~~g~~vI~IT~~~ 153 (198)
T 2xbl_A 130 PNILAAFREAKAKGMTCVGFTGNR 153 (198)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECSC
T ss_pred HHHHHHHHHHHHCCCeEEEEECCC
Confidence 345567888999999999999864
No 211
>2m0c_A Homeobox protein aristaless-like 4; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=21.80 E-value=1.4e+02 Score=21.03 Aligned_cols=22 Identities=14% Similarity=0.104 Sum_probs=17.3
Q ss_pred CCCCCCCCCHHHHhHHHHHhhh
Q 018376 22 RGGGKKKMTAEQSLAFNSVTEW 43 (357)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~ 43 (357)
+++.+..+|.+|...|..++.-
T Consensus 9 ~rr~Rt~ft~~q~~~Le~~F~~ 30 (75)
T 2m0c_A 9 KRRNRTTFTSYQLEELEKVFQK 30 (75)
T ss_dssp CCSCSCSSCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHh
Confidence 3455678999999999998863
No 212
>2vi6_A Homeobox protein nanog; homeodomain, DNA-binding, transcription, transcription facto developmental protein, transcription regulation, NUC homeobox; 2.6A {Mus musculus}
Probab=21.76 E-value=1.5e+02 Score=20.13 Aligned_cols=21 Identities=10% Similarity=-0.042 Sum_probs=14.7
Q ss_pred CCCCCCCCHHHHhHHHHHhhh
Q 018376 23 GGGKKKMTAEQSLAFNSVTEW 43 (357)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~ 43 (357)
++++..+|.+|...|...+.-
T Consensus 4 rr~Rt~ft~~q~~~Le~~F~~ 24 (62)
T 2vi6_A 4 QKMRTVFSQAQLCALKDRFQK 24 (62)
T ss_dssp ----CCCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHh
Confidence 345677999999999988864
No 213
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=21.61 E-value=1.8e+02 Score=26.01 Aligned_cols=65 Identities=11% Similarity=0.054 Sum_probs=36.4
Q ss_pred HHHHHHHHcCC-e-E-EeeCCCCCCChHHHHHHHH-HcCCcEEEeecCCC--------c---HHHHHHHHHHHhcCCcee
Q 018376 255 VAVQLIHRTGG-L-A-VLAHPWALKNPAAIIRKLK-DVGLHGLEVYRSDG--------K---LVDVNFLEKIDNFLLLLC 319 (357)
Q Consensus 255 evI~~I~~aGG-v-a-VLAHP~~~~~~~~li~~l~-~~GlDGIEv~~~~~--------~---~~~~~~~~lA~~~~Ll~t 319 (357)
.+.+++.+..+ + + +.-||.......+.++++. +.|+.||++...++ . .....+.++|.++|+.+.
T Consensus 83 ~~~~~~~~~p~r~~~~~~v~p~~~~~~~~el~~~~~~~g~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~ 162 (327)
T 2dvt_A 83 VLAEECAKRPDRFLAFAALPLQDPDAATEELQRCVNDLGFVGALVNGFSQEGDGQTPLYYDLPQYRPFWGEVEKLDVPFY 162 (327)
T ss_dssp HHHHHHHHCTTTEEEEECCCTTSHHHHHHHHHHHHHTTCCCEEEEESSBCCTTCCSCBCTTSGGGHHHHHHHHHHTCCEE
T ss_pred HHHHHHhhCCCceEEEeecCcCCHHHHHHHHHHHHhcCCceEEEECCCCCCCcccCCCCCCCcchHHHHHHHHHcCCeEE
Confidence 34555555554 3 2 2235643211123455553 56999999855432 1 112457899999999875
No 214
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=21.59 E-value=57 Score=26.97 Aligned_cols=24 Identities=13% Similarity=0.102 Sum_probs=20.0
Q ss_pred CCHHHHHHHHHHcCCcEEEEecCC
Q 018376 88 LSPSKLVERAHCNGVKVLALTDHD 111 (357)
Q Consensus 88 ~tp~elv~~A~~~Gl~~iaITDHd 111 (357)
-..-++++.|+++|.+.++||+..
T Consensus 110 ~~~~~~~~~ak~~g~~vi~IT~~~ 133 (183)
T 2xhz_A 110 SEITALIPVLKRLHVPLICITGRP 133 (183)
T ss_dssp HHHHHHHHHHHTTTCCEEEEESCT
T ss_pred HHHHHHHHHHHHCCCCEEEEECCC
Confidence 345567999999999999999964
No 215
>2cra_A Homeobox protein HOX-B13; DNA-binding, transcription regulation, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=21.55 E-value=2.1e+02 Score=19.94 Aligned_cols=21 Identities=5% Similarity=-0.146 Sum_probs=16.4
Q ss_pred CCCCCCCCHHHHhHHHHHhhh
Q 018376 23 GGGKKKMTAEQSLAFNSVTEW 43 (357)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~ 43 (357)
++++..+|.+|...|...++-
T Consensus 8 rr~Rt~ft~~Q~~~Le~~F~~ 28 (70)
T 2cra_A 8 RKKRIPYSKGQLRELEREYAA 28 (70)
T ss_dssp CCSCCCSCHHHHHHHHHHHHH
T ss_pred CCCCCcCCHHHHHHHHHHHHh
Confidence 344567899999999988864
No 216
>3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A*
Probab=21.54 E-value=1.5e+02 Score=29.56 Aligned_cols=51 Identities=14% Similarity=0.075 Sum_probs=38.1
Q ss_pred CCCCCC-HHHHHHHHHHcC---CeEEee-------CCCCCCChHHHHHHHHHcCCcEEEeec
Q 018376 247 TGSEPL-AEVAVQLIHRTG---GLAVLA-------HPWALKNPAAIIRKLKDVGLHGLEVYR 297 (357)
Q Consensus 247 ~~~~~~-~eevI~~I~~aG---GvaVLA-------HP~~~~~~~~li~~l~~~GlDGIEv~~ 297 (357)
+..+|+ +..+++.||+.| ||=+-+ +|+.+...+...+.+++.|+|.|-+=.
T Consensus 89 ~~kFP~Glk~Lad~ih~~GlKfGIw~~pG~~tC~~~pGsl~~~~~da~~fa~WGVDylK~D~ 150 (479)
T 3lrk_A 89 EQKFPNGMGHVADHLHNNSFLFGMYSSAGEYTCAGYPGSLGREEEDAQFFANNRVDYLKYDN 150 (479)
T ss_dssp TTTCTTCHHHHHHHHHHTTCEEEEEEESSSBCTTSSBCCTTCHHHHHHHHHHTTCCEEEEEC
T ss_pred hhhcCCCHHHHHHHHHHCCCeeEEEecCccccccCCCchhHHHHHHHHHHHHhCCcEEEEcc
Confidence 456777 899999999999 333334 566555556667789999999999744
No 217
>1k61_A Mating-type protein alpha-2; protein-DNA complex, homeodomain, hoogsteen base PAIR, transcription/DNA complex; HET: 5IU; 2.10A {Synthetic} SCOP: a.4.1.1
Probab=21.53 E-value=1.9e+02 Score=19.38 Aligned_cols=19 Identities=16% Similarity=0.038 Sum_probs=15.2
Q ss_pred CCCCCCHHHHhHHHHHhhh
Q 018376 25 GKKKMTAEQSLAFNSVTEW 43 (357)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~ 43 (357)
++..+|.+|...|...+.-
T Consensus 1 rr~~ft~~q~~~Le~~f~~ 19 (60)
T 1k61_A 1 RGHRFTKENVRILESWFAK 19 (60)
T ss_dssp CCCSCCHHHHHHHHHHHHH
T ss_pred CcCcCCHHHHHHHHHHHHH
Confidence 3568899999998888765
No 218
>2zuv_A Lacto-N-biose phosphorylase; beta-alpha-barrel, TIM barrel, glycosyltransferase, transferase; HET: NDG; 1.85A {Bifidobacterium longum} PDB: 2zus_A* 2zuu_A* 2zut_A* 2zuw_A*
Probab=21.53 E-value=73 Score=33.43 Aligned_cols=17 Identities=18% Similarity=0.204 Sum_probs=13.8
Q ss_pred CHHHHHHHHHHcCCeEE
Q 018376 252 LAEVAVQLIHRTGGLAV 268 (357)
Q Consensus 252 ~~eevI~~I~~aGGvaV 268 (357)
.+.+.|+++|++|=-|.
T Consensus 292 ~~k~lvd~~H~~gKeAm 308 (759)
T 2zuv_A 292 NVKQLADMSHAAGKEAM 308 (759)
T ss_dssp HHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHhcCceeE
Confidence 36899999999996554
No 219
>2dms_A Homeobox protein OTX2; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=21.46 E-value=2e+02 Score=20.60 Aligned_cols=22 Identities=9% Similarity=-0.006 Sum_probs=17.3
Q ss_pred CCCCCCCCCHHHHhHHHHHhhh
Q 018376 22 RGGGKKKMTAEQSLAFNSVTEW 43 (357)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~ 43 (357)
.++++..+|.+|...|..+++-
T Consensus 7 ~rr~Rt~ft~~Q~~~Le~~F~~ 28 (80)
T 2dms_A 7 GRRERTTFTRAQLDVLEALFAK 28 (80)
T ss_dssp CCCCCSSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHc
Confidence 3445667999999999998865
No 220
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=21.42 E-value=1.3e+02 Score=27.92 Aligned_cols=65 Identities=18% Similarity=0.156 Sum_probs=35.4
Q ss_pred HHHHHHHHHHcCCeEEeeCCCCCCChHHHHHHHHHcCCcEEE----eec--------CCCcHHH-HHHHHHHHhcCCcee
Q 018376 253 AEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLE----VYR--------SDGKLVD-VNFLEKIDNFLLLLC 319 (357)
Q Consensus 253 ~eevI~~I~~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIE----v~~--------~~~~~~~-~~~~~lA~~~~Ll~t 319 (357)
+.++++.|++..|+.|-..|+.. ..+.+..|+++|++.+- .++ +.++.+. ....+.|++.|+.++
T Consensus 128 ~~~l~~~ik~~~~i~i~~s~g~~--~~e~l~~L~~aG~~~i~i~lEt~~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~ 205 (350)
T 3t7v_A 128 FVELVQIVKEELGLPIMISPGLM--DNATLLKAREKGANFLALYQETYDTELYRKLRVGQSFDGRVNARRFAKQQGYCVE 205 (350)
T ss_dssp HHHHHHHHHHHHCSCEEEECSSC--CHHHHHHHHHTTEEEEECCCBCSCHHHHHHHSTTCCHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHhhcCceEEEeCCCC--CHHHHHHHHHcCCCEEEEeeecCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCeEc
Confidence 35666777654456666666532 24567777777777553 221 1111111 245566777777654
No 221
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=21.23 E-value=90 Score=28.51 Aligned_cols=45 Identities=16% Similarity=0.195 Sum_probs=34.5
Q ss_pred CHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcCCeEEEEE
Q 018376 89 SPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGV 134 (357)
Q Consensus 89 tp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vi~Gi 134 (357)
.++.+++.+.+.|++.+-|-|- ...-..++.+.+++.|+.+++=+
T Consensus 111 g~e~f~~~~~~aGvdgvii~Dl-p~ee~~~~~~~~~~~gl~~i~li 155 (267)
T 3vnd_A 111 GIDEFYTKAQAAGVDSVLIADV-PVEESAPFSKAAKAHGIAPIFIA 155 (267)
T ss_dssp CHHHHHHHHHHHTCCEEEETTS-CGGGCHHHHHHHHHTTCEEECEE
T ss_pred hHHHHHHHHHHcCCCEEEeCCC-CHhhHHHHHHHHHHcCCeEEEEE
Confidence 3599999999999999999774 33345678888888888765433
No 222
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=21.23 E-value=1.4e+02 Score=26.48 Aligned_cols=65 Identities=11% Similarity=0.081 Sum_probs=38.7
Q ss_pred HHHHHHHHcCC--eEEeeCCCCC-CChHHHHHHHH-HcCCcEEEeecCCC-----cHHHHHHHHHHHhcCCcee
Q 018376 255 VAVQLIHRTGG--LAVLAHPWAL-KNPAAIIRKLK-DVGLHGLEVYRSDG-----KLVDVNFLEKIDNFLLLLC 319 (357)
Q Consensus 255 evI~~I~~aGG--vaVLAHP~~~-~~~~~li~~l~-~~GlDGIEv~~~~~-----~~~~~~~~~lA~~~~Ll~t 319 (357)
.+.+++.+..+ .++..||... ....+.++++. +.|+.|||+...++ ......+.++|.++|+.+.
T Consensus 79 ~~~~~~~~~p~r~~~~~~~p~~~~~~~~~el~~~~~~~g~~gi~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~ 152 (307)
T 2f6k_A 79 DGKSLAQQYPDQLGYLASLPIPYELDAVKTVQQALDQDGALGVTVPTNSRGLYFGSPVLERVYQELDARQAIVA 152 (307)
T ss_dssp HHHHHHHHCTTTEEEEECCCTTCHHHHHHHHHHHHHTSCCSEEEEESEETTEETTCGGGHHHHHHHHTTTCEEE
T ss_pred HHHHHHHhCccceeEEEeCCCCCHHHHHHHHHHHHhccCCcEEEEeccCCCCCCCcHhHHHHHHHHHHcCCeEE
Confidence 45566666554 3556676321 11123455554 57999999865432 1122458899999999875
No 223
>1req_A Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichii subspshermanii} SCOP: c.1.19.1 c.23.6.1 PDB: 2req_A* 3req_A* 4req_A* 6req_A* 7req_A* 5req_A* 1e1c_A*
Probab=21.06 E-value=1.2e+02 Score=31.82 Aligned_cols=47 Identities=17% Similarity=0.260 Sum_probs=35.8
Q ss_pred CCCHHHHHHHHHHcCCcEEEEecCCCCC--CHHHHHHHHHhcCC---eEEEE
Q 018376 87 YLSPSKLVERAHCNGVKVLALTDHDTMS--GIPEAIETARRFGM---KIIPG 133 (357)
Q Consensus 87 ~~tp~elv~~A~~~Gl~~iaITDHdt~~--g~~~~~~~a~~~gi---~vi~G 133 (357)
..+|+++++.|++.+.+.|+++=.++.. ..++..+..++.|+ .++.|
T Consensus 633 ~v~~eeiv~aA~e~~adiVglSsl~~~~~~~~~~vi~~L~~~G~~~i~VivG 684 (727)
T 1req_A 633 FQTPEETARQAVEADVHVVGVSSLAGGHLTLVPALRKELDKLGRPDILITVG 684 (727)
T ss_dssp TBCHHHHHHHHHHTTCSEEEEEECSSCHHHHHHHHHHHHHHTTCTTSEEEEE
T ss_pred CCCHHHHHHHHHHcCCCEEEEeeecHhHHHHHHHHHHHHHhcCCCCCEEEEc
Confidence 4799999999999999999999876644 34556666666554 66666
No 224
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=20.96 E-value=1.5e+02 Score=27.99 Aligned_cols=63 Identities=17% Similarity=0.140 Sum_probs=40.8
Q ss_pred HHHHHHHHcCCeEEeeCCCCCCC--hHHHHHHHHHcCCcEEEeecCCC-c-H--HH--HHHHHHHH-hcCCce
Q 018376 255 VAVQLIHRTGGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDG-K-L--VD--VNFLEKID-NFLLLL 318 (357)
Q Consensus 255 evI~~I~~aGGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~-~-~--~~--~~~~~lA~-~~~Ll~ 318 (357)
++++. ...|.++|+|+-+.... .-++.+.+.+.|.||+=+..|+. . . +. +.|..+|+ .-+|.+
T Consensus 83 ~vi~~-~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~IA~aa~~lPi 154 (344)
T 2hmc_A 83 EGVER-LVKAGIPVIVGTGAVNTASAVAHAVHAQKVGAKGLMVIPRVLSRGSVIAAQKAHFKAILSAAPEIPA 154 (344)
T ss_dssp HHHHH-HHHTTCCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCSSSTTCHHHHHHHHHHHHHHSTTSCE
T ss_pred HHHHH-HhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCccCCCCCHHHHHHHHHHHHhhCCCCcE
Confidence 34555 45677999999875432 13455666788999999977764 2 2 22 46778888 666654
No 225
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=20.94 E-value=1.6e+02 Score=25.80 Aligned_cols=50 Identities=16% Similarity=0.011 Sum_probs=36.3
Q ss_pred CCCHHHHHHHHHHcCCcEEEEecCCCCC---C--HHHHHHHHHhcCCeEEEEEEE
Q 018376 87 YLSPSKLVERAHCNGVKVLALTDHDTMS---G--IPEAIETARRFGMKIIPGVEI 136 (357)
Q Consensus 87 ~~tp~elv~~A~~~Gl~~iaITDHdt~~---g--~~~~~~~a~~~gi~vi~GiEi 136 (357)
..++.++++.+.+.|++.|-++|-+... + ...+.+.++..++.++.+==|
T Consensus 34 ~~~~~~~a~~~~~~G~~~i~v~d~~~~~~~~~~~~~~i~~i~~~~~ipvi~~Ggi 88 (247)
T 3tdn_A 34 GILLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIASGGA 88 (247)
T ss_dssp EEEHHHHHHHHHHTTCSEEEEEETTTTTCSSCCCHHHHHHHGGGCCSCEEEESCC
T ss_pred CCCHHHHHHHHHHcCCCEEEEEecCcccCCCcccHHHHHHHHHhCCCCEEEeCCC
Confidence 4689999999999999999999986432 2 344455556677777766333
No 226
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=20.93 E-value=1.5e+02 Score=27.09 Aligned_cols=41 Identities=17% Similarity=0.188 Sum_probs=29.7
Q ss_pred CCCHHHHHHHHHHcCCcEEEEecCCCC-----CCHHHHHHHHHhcC
Q 018376 87 YLSPSKLVERAHCNGVKVLALTDHDTM-----SGIPEAIETARRFG 127 (357)
Q Consensus 87 ~~tp~elv~~A~~~Gl~~iaITDHdt~-----~g~~~~~~~a~~~g 127 (357)
..+++++++.|++.+.++|+++=--+. ....+..+.+++.|
T Consensus 166 ~vp~e~iv~aa~e~~~d~VglS~l~t~~~~~~~~~~~~i~~L~~~g 211 (262)
T 1xrs_B 166 QVANEDFIKKAVELEADVLLVSQTVTQKNVHIQNMTHLIELLEAEG 211 (262)
T ss_dssp SBCHHHHHHHHHHTTCSEEEEECCCCTTSHHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHcCCCEEEEEeecCCccchHHHHHHHHHHHHhcC
Confidence 479999999999999999999865443 12334455555555
No 227
>4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron}
Probab=20.88 E-value=1.1e+02 Score=29.11 Aligned_cols=51 Identities=12% Similarity=0.160 Sum_probs=38.2
Q ss_pred CCCHHHH---HHHHHHcCCcEEEEec-C-CCC------------------CCHHHHHHHHHhcCCeEEEEEEEE
Q 018376 87 YLSPSKL---VERAHCNGVKVLALTD-H-DTM------------------SGIPEAIETARRFGMKIIPGVEIS 137 (357)
Q Consensus 87 ~~tp~el---v~~A~~~Gl~~iaITD-H-dt~------------------~g~~~~~~~a~~~gi~vi~GiEis 137 (357)
.+++++. ++.+++.|++.+.+|- | +.. +-+.++.++|++.|++|+.|+=.+
T Consensus 50 nWd~~eW~~~~~~mK~~GikyvIl~~~~~~gf~~~pS~~~~~~~~~~p~~Dlv~~~l~aa~k~Gmkv~~Gly~S 123 (340)
T 4h41_A 50 NWGEKEWDLDFQHMKRIGIDTVIMIRSGYRKFMTYPSPYLLKKGCYMPSVDLVDMYLRLAEKYNMKFYFGLYDS 123 (340)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEESCSEETTEESSCCHHHHHTTCCCCSBCHHHHHHHHHHHTTCEEEEECCBC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEEEEeeCCeeccCcccccccCccCCcccHHHHHHHHHHHhCCeEEEecCCC
Confidence 4788887 7788999999888864 2 111 116778899999999999997544
No 228
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=20.81 E-value=2.3e+02 Score=25.30 Aligned_cols=43 Identities=14% Similarity=-0.030 Sum_probs=30.4
Q ss_pred CHHHHHHHHHHcCCcEEEEecCCCCC---------CHHHHHHHHHhcCCeEE
Q 018376 89 SPSKLVERAHCNGVKVLALTDHDTMS---------GIPEAIETARRFGMKII 131 (357)
Q Consensus 89 tp~elv~~A~~~Gl~~iaITDHdt~~---------g~~~~~~~a~~~gi~vi 131 (357)
+.+.+++.|++.|+++|=|.-.+... ...++.+.+++.|+.+.
T Consensus 36 ~~~~~~~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~i~ 87 (316)
T 3qxb_A 36 PDRLAGLVRDDLGLEYVQYTYDLTDPWWPDIERDRRAIAYAKAFRKAGLTIE 87 (316)
T ss_dssp HHHHHHHHHHTSCCCEEEEETTTSCTTSCHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHcCCCEEEeeccccCccccccchhhHHHHHHHHHHHcCCeEE
Confidence 34556788899999999997543322 24566777888898764
No 229
>1xx1_A Smase I, sphingomyelinase I; structure, quick cryo-soaking, activity, smase D, hydrolase; HET: EPE; 1.75A {Loxosceles laeta} PDB: 2f9r_A*
Probab=20.56 E-value=61 Score=29.23 Aligned_cols=27 Identities=37% Similarity=0.420 Sum_probs=19.1
Q ss_pred eEEeeCCCCCCChHHHHHHHHHcCCcEEEe
Q 018376 266 LAVLAHPWALKNPAAIIRKLKDVGLHGLEV 295 (357)
Q Consensus 266 vaVLAHP~~~~~~~~li~~l~~~GlDGIEv 295 (357)
+.|+||+. |.-..+....+.|.|+||+
T Consensus 7 ~~iiaHrE---NTl~Af~~A~~~Gad~IE~ 33 (285)
T 1xx1_A 7 IWNLAHMV---NAVAQIPDFLDLGANALEA 33 (285)
T ss_dssp EEEEESCC---CSTTHHHHHHHHTCSEEEE
T ss_pred cEEEEehh---ccHHHHHHHHHhCCCEEEE
Confidence 35899983 3223456677889999997
No 230
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=20.56 E-value=1.7e+02 Score=26.39 Aligned_cols=47 Identities=19% Similarity=0.342 Sum_probs=35.6
Q ss_pred CCCCCHHHHHHHHHH-cCCcEEEEecCCCCCC----HHHHHHHHHhcCCeEE
Q 018376 85 DGYLSPSKLVERAHC-NGVKVLALTDHDTMSG----IPEAIETARRFGMKII 131 (357)
Q Consensus 85 DG~~tp~elv~~A~~-~Gl~~iaITDHdt~~g----~~~~~~~a~~~gi~vi 131 (357)
++.++++++-+...+ ...+++.++..++..| +.++.++|++.|+.+|
T Consensus 129 ~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li 180 (386)
T 2dr1_A 129 GKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNPLPELAKVAKEHDKLVF 180 (386)
T ss_dssp TCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEE
T ss_pred CCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCCHHHHHHHHHHcCCeEE
Confidence 567899988776654 4788999996565555 6788889999888665
No 231
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=20.41 E-value=49 Score=28.91 Aligned_cols=45 Identities=20% Similarity=0.214 Sum_probs=34.2
Q ss_pred CCCHHHHHHHHHHcCCcEEEEecCC-CCCCHHHHHHHHHhcCCeEE
Q 018376 87 YLSPSKLVERAHCNGVKVLALTDHD-TMSGIPEAIETARRFGMKII 131 (357)
Q Consensus 87 ~~tp~elv~~A~~~Gl~~iaITDHd-t~~g~~~~~~~a~~~gi~vi 131 (357)
..++++.++.|++.|++.|-+...+ .-....++.+.+++.|+.+.
T Consensus 17 ~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~l~~~gl~~~ 62 (275)
T 3qc0_A 17 QCGFAEAVDICLKHGITAIAPWRDQVAAIGLGEAGRIVRANGLKLT 62 (275)
T ss_dssp TCCHHHHHHHHHHTTCCEEECBHHHHHHHCHHHHHHHHHHHTCEES
T ss_pred CCCHHHHHHHHHHcCCCEEEeccccccccCHHHHHHHHHHcCCceE
Confidence 4699999999999999999986532 12235667778888888753
No 232
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=20.37 E-value=1.3e+02 Score=26.95 Aligned_cols=14 Identities=7% Similarity=0.147 Sum_probs=7.9
Q ss_pred HHHHHHHhcCCcee
Q 018376 306 NFLEKIDNFLLLLC 319 (357)
Q Consensus 306 ~~~~lA~~~~Ll~t 319 (357)
.+.++|.++||.+.
T Consensus 68 ~~v~~a~~~Gi~Vi 81 (294)
T 2whl_A 68 EVIELAEQNKMVAV 81 (294)
T ss_dssp HHHHHHHTTTCEEE
T ss_pred HHHHHHHHCCCEEE
Confidence 45566666666553
No 233
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=20.33 E-value=1.4e+02 Score=26.01 Aligned_cols=43 Identities=23% Similarity=0.249 Sum_probs=33.8
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcCCeEEEEE
Q 018376 91 SKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGV 134 (357)
Q Consensus 91 ~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vi~Gi 134 (357)
++.++.|.+.|.+.+.+-|-. .....++.+++++.|+.+++++
T Consensus 98 ~~~~~~~~~~Gad~v~~~~~~-~~~~~~~~~~~~~~g~~~~~~i 140 (248)
T 1geq_A 98 RNFLAEAKASGVDGILVVDLP-VFHAKEFTEIAREEGIKTVFLA 140 (248)
T ss_dssp HHHHHHHHHHTCCEEEETTCC-GGGHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHCCCCEEEECCCC-hhhHHHHHHHHHHhCCCeEEEE
Confidence 899999999999999995432 2335567778888898888876
No 234
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=20.19 E-value=1.2e+02 Score=27.68 Aligned_cols=56 Identities=16% Similarity=0.132 Sum_probs=36.0
Q ss_pred cCCeEEeeCCCCCCC--hHHHHHHHHHcCCcEEEeecCCC---cHHH--HHHHHHHHhcCCce
Q 018376 263 TGGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDG---KLVD--VNFLEKIDNFLLLL 318 (357)
Q Consensus 263 aGGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~---~~~~--~~~~~lA~~~~Ll~ 318 (357)
.|.++|+|+-+.... .-++.+.+.+.|.||+=+..|+. +++. +.+..+|+.-++.+
T Consensus 68 ~gr~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPi 130 (291)
T 3a5f_A 68 NKRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVITPYYNKTTQKGLVKHFKAVSDAVSTPI 130 (291)
T ss_dssp TTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHC-CTGGGCCSCE
T ss_pred CCCCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCE
Confidence 345899999875432 13455667788999999988765 2222 35667777766654
No 235
>2h1k_A IPF-1, pancreatic and duodenal homeobox 1, homeodomain; protein-DNA complex, transcription/DNA complex; 2.42A {Mesocricetus auratus}
Probab=20.17 E-value=2e+02 Score=19.60 Aligned_cols=22 Identities=14% Similarity=0.086 Sum_probs=16.4
Q ss_pred CCCCCCCCCHHHHhHHHHHhhh
Q 018376 22 RGGGKKKMTAEQSLAFNSVTEW 43 (357)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~ 43 (357)
+++++..+|.+|...|...+.-
T Consensus 3 ~rr~Rt~ft~~Q~~~Le~~F~~ 24 (63)
T 2h1k_A 3 NKRTRTAYTRAQLLELEKEFLF 24 (63)
T ss_dssp --CCCCCCCHHHHHHHHHHHHH
T ss_pred CCCCCCCcCHHHHHHHHHHHhc
Confidence 3455678999999999988864
No 236
>2xfr_A Beta-amylase; hydrolase, carbohydrate metabolism, glycosyl hydrolase famil starch degradation, germination; 0.97A {Hordeum vulgare} PDB: 2xff_A 2xfy_A* 2xg9_A* 2xgb_A* 2xgi_A* 1b1y_A*
Probab=20.08 E-value=2.3e+02 Score=28.62 Aligned_cols=40 Identities=25% Similarity=0.297 Sum_probs=28.3
Q ss_pred HHHHHHHHHcCCcEEEee--cC-------CC-c-HHHHHHHHHHHhcCCce
Q 018376 279 AAIIRKLKDVGLHGLEVY--RS-------DG-K-LVDVNFLEKIDNFLLLL 318 (357)
Q Consensus 279 ~~li~~l~~~GlDGIEv~--~~-------~~-~-~~~~~~~~lA~~~~Ll~ 318 (357)
..-+..|+.+|+|||+|- -. .. + .-...+.+++++.||..
T Consensus 34 ~a~L~~LK~~GVdGVmvDVWWGiVE~~~P~~YdWsgY~~L~~mvr~~GLKl 84 (535)
T 2xfr_A 34 RAQLRKLVEAGVDGVMVDVWWGLVEGKGPKAYDWSAYKQLFELVQKAGLKL 84 (535)
T ss_dssp HHHHHHHHHTTCCEEEEEEEHHHHTCSSTTCCCCHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHcCCCEEEEEeEeeeeccCCCCccCcHHHHHHHHHHHHcCCeE
Confidence 345778999999999873 21 11 1 12356899999999986
No 237
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=20.04 E-value=1.1e+02 Score=27.48 Aligned_cols=42 Identities=21% Similarity=0.396 Sum_probs=32.7
Q ss_pred CCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcCCeEEEEEE
Q 018376 88 LSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVE 135 (357)
Q Consensus 88 ~tp~elv~~A~~~Gl~~iaITDHdt~~g~~~~~~~a~~~gi~vi~GiE 135 (357)
++ .+-++.|.+.|.+++.. .+ --++..++|++.|+.++||+-
T Consensus 94 lt-~~~a~~Ai~AGA~fIvs-P~----~~~~vi~~~~~~gi~~ipGv~ 135 (232)
T 4e38_A 94 LN-GEQALAAKEAGATFVVS-PG----FNPNTVRACQEIGIDIVPGVN 135 (232)
T ss_dssp CS-HHHHHHHHHHTCSEEEC-SS----CCHHHHHHHHHHTCEEECEEC
T ss_pred CC-HHHHHHHHHcCCCEEEe-CC----CCHHHHHHHHHcCCCEEcCCC
Confidence 45 56689999999999863 32 236777888899999999964
No 238
>3eyp_A Putative alpha-L-fucosidase; structural genomics, hydrolase, lipoprotein, PSI-2, protein initiative; 1.90A {Bacteroides thetaiotaomicron}
Probab=20.03 E-value=1.1e+02 Score=30.24 Aligned_cols=51 Identities=18% Similarity=0.341 Sum_probs=37.2
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEe---------------cCCCCC---------CHHHHHHHHHhcCCeEEEEEEEE
Q 018376 85 DGYLSPSKLVERAHCNGVKVLALT---------------DHDTMS---------GIPEAIETARRFGMKIIPGVEIS 137 (357)
Q Consensus 85 DG~~tp~elv~~A~~~Gl~~iaIT---------------DHdt~~---------g~~~~~~~a~~~gi~vi~GiEis 137 (357)
--.+.|++.++.|++.|++.+.+| |++.+. =+.++.++|++.||++ |+=+|
T Consensus 51 p~~fd~~~w~~~~k~aGaky~v~takHHdGf~lw~S~~t~~~~~~~p~~~~k~Div~e~~~A~r~~Gl~~--g~Y~s 125 (469)
T 3eyp_A 51 PTALDCRQWMQTLKAAGIPAAILTAKHADGFCLWPSKYTDYSVKNAAWKNGKGDVVREFVDACEEYGLKA--GIYLG 125 (469)
T ss_dssp CSSCCHHHHHHHHHHTTCCEEEEEEECTTCCBSSCCTTCSSBGGGSSGGGGTCCHHHHHHHHHHHHTCEE--EEEEC
T ss_pred cccCCHHHHHHHHHHcCCCEEEEEEEeCCCccccCCCCCCcccccCcccCCCCCHHHHHHHHHHHcCCeE--EEEeC
Confidence 345899999999999999999886 333221 1347888899988876 55444
Done!