STRING 9.05 
  ATRPAC43 protein (Arabidopsis thaliana) - STRING network view
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
ATRPAC43
ATRPAC43; DNA binding / DNA-directed RNA polymerase/ protein dimerization; ATRPAC43; FUNCTIONS IN- DNA-directed RNA polymerase activity, protein dimerization activity, DNA binding; INVOLVED IN- transcription; LOCATED IN- nucleus; EXPRESSED IN- 11 plant structures; EXPRESSED DURING- 4 anthesis, C globular stage, petal differentiation and expansion stage, D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s- DNA-directed RNA polymerase, insert (InterPro-IPR011262), DNA-directed RNA polymerase, dimerisation (InterPro-IPR011261), DNA-directed RNA polymerase, RpoA/D/Rpb [...] (385 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
AT1G61700
DNA-directed RNA polymerase II, putative (RPB10); Protein of unknown function that is homologou [...] (71 aa)
    0.979
NRPA2
NRPA2; DNA binding / DNA-directed RNA polymerase/ ribonucleoside binding; Encodes a subunit of [...] (1178 aa)
    0.967
NRPA1
NRPA1; DNA binding / DNA-directed RNA polymerase/ zinc ion binding; Encodes a subunit of RNA po [...] (1670 aa)
    0.966
AT1G06790
RNA polymerase Rpb7 N-terminal domain-containing protein; RNA polymerase Rpb7 N-terminal domain [...] (204 aa)
    0.952
NRPC1
NRPC1; DNA binding / DNA-directed RNA polymerase/ ribonucleoside binding / zinc ion binding; En [...] (1376 aa)
    0.948
NRPB10
NRPB10; DNA binding / DNA-directed RNA polymerase; Non-catalytic subunit common to nuclear DNA- [...] (71 aa)
    0.939
NRPB12
NRPB12; DNA binding / DNA-directed RNA polymerase; Non-catalytic subunit common to nuclear DNA- [...] (51 aa)
    0.929
ATRPAC42
ATRPAC42; DNA binding / DNA-directed RNA polymerase/ protein dimerization; ATRPAC42; FUNCTIONS [...] (375 aa)
   0.926
NRPB5
NRPB5; DNA binding / DNA-directed RNA polymerase; Non-catalytic subunit common to DNA-dependent [...] (205 aa)
    0.923
AtLa1
AtLa1 (Arabidopsis thaliana La protein 1); RNA binding; Encodes AtLa1, a member of the highly a [...] (433 aa)
      0.907
 
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Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
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