Query 018379
Match_columns 357
No_of_seqs 185 out of 1319
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 14:20:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018379.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018379hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 7.6E-82 2.6E-86 604.4 27.2 334 16-351 5-351 (356)
2 1w9y_A 1-aminocyclopropane-1-c 100.0 6E-76 2E-80 555.3 20.2 298 49-356 2-305 (319)
3 3oox_A Putative 2OG-Fe(II) oxy 100.0 1.4E-74 4.7E-79 545.4 26.3 290 48-345 4-309 (312)
4 1odm_A Isopenicillin N synthas 100.0 1.9E-70 6.4E-75 521.0 26.0 284 47-346 5-325 (331)
5 1dcs_A Deacetoxycephalosporin 100.0 9.5E-71 3.3E-75 518.5 18.1 276 49-346 3-306 (311)
6 3on7_A Oxidoreductase, iron/as 100.0 5.4E-66 1.8E-70 479.1 24.5 258 49-344 2-276 (280)
7 2hbt_A EGL nine homolog 1; pro 95.6 0.28 9.7E-06 43.6 14.2 83 212-310 117-213 (247)
8 3dkq_A PKHD-type hydroxylase S 95.2 0.098 3.3E-06 46.5 9.7 81 211-309 98-194 (243)
9 2rg4_A Uncharacterized protein 89.6 6.8 0.00023 33.7 13.1 43 258-312 166-209 (216)
10 2iuw_A Alkylated repair protei 84.6 3.4 0.00012 36.2 8.3 81 213-308 127-228 (238)
11 3s57_A Alpha-ketoglutarate-dep 84.3 3.1 0.00011 35.6 7.7 80 213-307 101-200 (204)
12 2jig_A Prolyl-4 hydroxylase; h 82.4 5.3 0.00018 34.4 8.5 89 213-311 99-218 (224)
13 3i3q_A Alpha-ketoglutarate-dep 82.1 4.2 0.00014 35.0 7.6 80 212-308 105-201 (211)
14 3itq_A Prolyl 4-hydroxylase, a 81.2 8.2 0.00028 33.2 9.2 86 213-310 112-212 (216)
15 3tht_A Alkylated DNA repair pr 74.7 5.1 0.00017 37.2 6.3 106 212-326 198-328 (345)
16 3o2g_A Gamma-butyrobetaine dio 49.4 5.8 0.0002 37.4 1.5 52 50-109 122-173 (388)
17 2dbn_A Hypothetical protein YB 48.0 6.5 0.00022 37.7 1.6 53 49-108 99-151 (461)
18 2opi_A L-fuculose-1-phosphate 45.6 12 0.00042 31.8 2.9 36 50-91 125-160 (212)
19 1otj_A Alpha-ketoglutarate-dep 44.9 17 0.00059 32.2 3.9 50 49-107 16-65 (283)
20 1e4c_P L-fuculose 1-phosphate 39.6 17 0.00059 31.0 2.9 36 50-91 122-157 (215)
21 1oih_A Putative alkylsulfatase 37.2 27 0.00091 31.2 3.9 51 49-108 26-77 (301)
22 2fk5_A Fuculose-1-phosphate al 35.9 21 0.00071 30.1 2.8 36 50-91 117-153 (200)
23 1pvt_A Sugar-phosphate aldolas 35.8 24 0.00084 30.5 3.3 36 50-91 161-196 (238)
24 3pvj_A Alpha-ketoglutarate-dep 30.9 33 0.0011 30.4 3.4 51 49-108 14-64 (277)
25 1vm6_A DHPR, dihydrodipicolina 30.2 48 0.0016 28.7 4.1 43 52-102 56-98 (228)
26 3pnt_A NAD+-glycohydrolase; gl 29.5 25 0.00085 29.8 2.1 53 25-90 188-240 (268)
27 2v9l_A Rhamnulose-1-phosphate 29.1 26 0.00089 31.1 2.3 36 50-91 179-214 (274)
28 3rcq_A Aspartyl/asparaginyl be 29.0 88 0.003 26.3 5.5 43 271-313 140-187 (197)
29 3kt7_A PKHD-type hydroxylase T 27.8 1.9E+02 0.0065 28.8 8.3 101 184-309 105-227 (633)
30 1m5a_B Insulin B chain; alpha 27.1 63 0.0022 18.4 2.8 19 67-85 9-27 (30)
31 3r1j_A Alpha-ketoglutarate-dep 25.4 59 0.002 29.2 4.0 51 49-108 20-71 (301)
32 2da7_A Zinc finger homeobox pr 25.1 38 0.0013 23.5 2.1 40 165-204 14-53 (71)
33 2x4k_A 4-oxalocrotonate tautom 24.7 62 0.0021 20.7 3.1 24 177-200 18-41 (63)
34 3ocr_A Class II aldolase/adduc 24.4 42 0.0014 29.8 2.8 37 50-91 156-192 (273)
35 3abf_A 4-oxalocrotonate tautom 23.4 61 0.0021 21.0 2.9 23 178-200 17-39 (64)
36 3jsy_A Acidic ribosomal protei 23.0 1.2E+02 0.0041 25.7 5.3 38 67-104 6-43 (213)
37 4ay7_A Methylcobalamin\: coenz 22.7 1.7E+02 0.0058 26.5 6.8 41 67-108 304-348 (348)
38 1zav_A 50S ribosomal protein L 22.3 1.7E+02 0.0057 23.9 6.0 39 67-105 9-47 (180)
39 1e5r_A Proline oxidase; oxidor 21.5 96 0.0033 27.8 4.6 65 230-308 103-175 (290)
40 2j01_J 50S ribosomal protein L 21.5 1.6E+02 0.0054 23.9 5.7 38 67-104 7-45 (173)
41 2z7b_A MLR6791 protein; class 20.8 68 0.0023 28.3 3.4 38 50-91 157-201 (270)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=7.6e-82 Score=604.36 Aligned_cols=334 Identities=30% Similarity=0.592 Sum_probs=295.7
Q ss_pred hcHHHHHh-CCCCCCCccccCCCCCCCcCC---CC---CCCCCcEEEcCCCCCCCCC-hHHHHHHHHHHhhccceEEEEc
Q 018379 16 KTVQELIT-SGKELPESYIYKGSDARSLDA---SL---PLMDIPIIDIGLLTSPSSS-STQELEKLRSALSFWGCFQAIN 87 (357)
Q Consensus 16 ~~v~~~~~-~~~~~p~~y~~p~~~~~~~~~---~~---~~~~iPvIDls~l~~~~~~-~~~~~~~l~~A~~~~Gff~l~n 87 (357)
++||+|++ |+.+||.+||+|+++++.... .. ....||||||+.+.+++++ +.+++++|.+||++||||||+|
T Consensus 5 ~~v~~l~~~~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~n 84 (356)
T 1gp6_A 5 ERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLIN 84 (356)
T ss_dssp CCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEES
T ss_pred ccHHHHHhcCCCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEeC
Confidence 57999999 889999999999888764221 01 1236999999999765543 2568999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCHHHhcccccCC--CCccccccccccccccccccccccccCCCCccccccCcCCCCch
Q 018379 88 YHGIEPEFLDKMGEVGKQFFDFPPETKHKYSRKD--GSTEGYGSDIIIAEEQTLDWTDRLFLTTSPKDQRQLKFWPEIPE 165 (357)
Q Consensus 88 ~hgi~~~l~~~~~~~~~~fF~lp~e~K~~~~~~~--~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~n~WP~~~~ 165 (357)
|||+.++++++++.+++||+||.|+|+++.... ...+||+........+..||+|.|++...|.....+|.||+.++
T Consensus 85 -HGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~~~ 163 (356)
T 1gp6_A 85 -HGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPS 163 (356)
T ss_dssp -CSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSST
T ss_pred -CCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCCcch
Confidence 999999999999999999999999999997643 46799987655455567899999988766654456799999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHhccccccccceEEeeeCCCCCCCCcccccCccCCCcEEEEee
Q 018379 166 SFRETLHEYTTELEKLNEILLKAMAMCLNLEENCFLDMYGEKENATMIARFNFYPPCPRPDLVIGVKPHADASAFTYLLQ 245 (357)
Q Consensus 166 ~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~~~HtD~~~lTlL~q 245 (357)
+||+.+++|++.|.+++..|+++|+++||+++++|.+.+...+.+.+.||++|||||+.++..+|+++|||+|+||||+|
T Consensus 164 ~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~q 243 (356)
T 1gp6_A 164 DYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILH 243 (356)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEE
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEEEE
Confidence 99999999999999999999999999999999999998841112577899999999998888899999999999999999
Q ss_pred cCCCCceeEeeCCcEEEecCCCCeEEEEccchhHhhhCCcccCCcceeccCCCCCeEEEEEeecCCCCc-eEecCCcccC
Q 018379 246 DKQVEGLQFLKDNQWYRVPLNPEALVINAGDYAEIMSNGIFKSPVHRAVTNSERKRMSLAVFCIPNPDR-EIEPVNGVVN 324 (357)
Q Consensus 246 d~~~~GLqv~~~g~W~~V~~~~g~~vVnvGd~l~~~TnG~~~s~~HRV~~~~~~~R~Si~~F~~P~~d~-~i~pl~~~~~ 324 (357)
| .++||||+++|+|++|+|.||++|||+||+||+||||+|||++|||+++++++||||+||++|+.|+ +|.|+++|++
T Consensus 244 d-~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~~~~ 322 (356)
T 1gp6_A 244 N-MVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVS 322 (356)
T ss_dssp C-SCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGCC
T ss_pred c-CCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChhhcC
Confidence 8 8999999999999999999999999999999999999999999999998888999999999999999 9999999999
Q ss_pred CCCCCCCcChH--HHHHHHHHHhcCCCCc
Q 018379 325 EARPRLYKKVK--DYVSLYFEYYQRGRRP 351 (357)
Q Consensus 325 ~~~p~~y~~~~--e~~~~~~~~~~~~~~~ 351 (357)
+++|++|++++ ||++.++.++++++..
T Consensus 323 ~~~p~~y~~~t~~eyl~~~~~~~~d~~~~ 351 (356)
T 1gp6_A 323 VESPAKFPPRTFAQHIEHKLFGKEQEELV 351 (356)
T ss_dssp SSSCCSSCCEEHHHHHHHHHHHHHHHHC-
T ss_pred CCCCccCCCccHHHHHHHHHHhccCcchh
Confidence 99999999999 9999999887766544
No 2
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=6e-76 Score=555.28 Aligned_cols=298 Identities=32% Similarity=0.592 Sum_probs=259.5
Q ss_pred CCCcEEEcCCCCCCCCChHHHHHHHHHHhhccceEEEEcCCCCCHHHHHHHHHHHHHhhCCCHHHhcccccCCCCccccc
Q 018379 49 MDIPIIDIGLLTSPSSSSTQELEKLRSALSFWGCFQAINYHGIEPEFLDKMGEVGKQFFDFPPETKHKYSRKDGSTEGYG 128 (357)
Q Consensus 49 ~~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~Gff~l~n~hgi~~~l~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~Gy~ 128 (357)
+.||||||+.+.. .++.+++++|.+||++||||||+| |||+.++++++++.+++||+||.|+|+++... .+||.
T Consensus 2 ~~iPvIDls~l~~--~~~~~~~~~l~~A~~~~GFF~v~n-HGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~---~~Gy~ 75 (319)
T 1w9y_A 2 ENFPIISLDKVNG--VERAATMEMIKDACENWGFFELVN-HGIPREVMDTVEKMTKGHYKKCMEQRFKELVA---SKALE 75 (319)
T ss_dssp CCCCEEEGGGGGS--TTHHHHHHHHHHHHHHTSEEEEES-CSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHT
T ss_pred CCCCEEECcccCc--ccHHHHHHHHHHHHHhCCEEEEEc-CCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC---CCCCC
Confidence 3699999998852 223778999999999999999999 99999999999999999999999999998543 24786
Q ss_pred cccccccccccccccccccCCCCccccccCcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHhcccc
Q 018379 129 SDIIIAEEQTLDWTDRLFLTTSPKDQRQLKFWPEIPESFRETLHEYTTELEKLNEILLKAMAMCLNLEENCFLDMYGEKE 208 (357)
Q Consensus 129 ~~~~~~~~~~~d~~e~~~~~~~p~~~~~~n~WP~~~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~~~~ 208 (357)
... .+.+..||+|.|++...|.. .+|.||+.+++||+.+++|++.|.+++..|+++|+++||+++++|.+.+...+
T Consensus 76 ~~~--~e~~~~d~ke~~~~~~~p~~--~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~ 151 (319)
T 1w9y_A 76 GVQ--AEVTDMDWESTFFLKHLPIS--NISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSK 151 (319)
T ss_dssp TCC--CCGGGCCCCEEEEEEEESCC--GGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTT
T ss_pred ccc--ccCCCCChhhheeeecCCcc--cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcC
Confidence 542 23457899999988765542 46899999999999999999999999999999999999999999999885211
Q ss_pred ccccceEEeeeCCCCCCCCcccccCccCCCcEEEEeecCCCCceeEeeCCcEEEecCCCCeEEEEccchhHhhhCCcccC
Q 018379 209 NATMIARFNFYPPCPRPDLVIGVKPHADASAFTYLLQDKQVEGLQFLKDNQWYRVPLNPEALVINAGDYAEIMSNGIFKS 288 (357)
Q Consensus 209 ~~~~~lrl~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd~~~~GLqv~~~g~W~~V~~~~g~~vVnvGd~l~~~TnG~~~s 288 (357)
.+.+.||++|||||+.++..+|+++|||+|+||||+||+.++||||+++|+|++|+|.||++|||+||+||+||||+|||
T Consensus 152 ~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~~kS 231 (319)
T 1w9y_A 152 GPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKS 231 (319)
T ss_dssp CCEEEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCC
T ss_pred CccceeEEEecCCCcccccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHhCCeeec
Confidence 25678999999999988888999999999999999995479999999999999999999999999999999999999999
Q ss_pred CcceeccCCCCCeEEEEEeecCCCCceEecCCcccCCC---CCCCCcChH--HHHHHHHHHhcCCCCc-ccccc
Q 018379 289 PVHRAVTNSERKRMSLAVFCIPNPDREIEPVNGVVNEA---RPRLYKKVK--DYVSLYFEYYQRGRRP-IEAAI 356 (357)
Q Consensus 289 ~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~~~~~---~p~~y~~~~--e~~~~~~~~~~~~~~~-~~~~~ 356 (357)
++|||+++++++|||++||++|+.|++|.|+++|++++ +|++|++++ ||++.+++.++.++.. ++.+|
T Consensus 232 ~~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~~~~~~~~ 305 (319)
T 1w9y_A 232 VMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMK 305 (319)
T ss_dssp CCEEECCCSSSCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTCSSHHHHHHHHH
T ss_pred ccceecCCCCCCceEEEEEecCCCCCeEeCchhhcCcccccCccccCcEeHHHHHHHHHhhhcCcchhHHHHHH
Confidence 99999998888999999999999999999999999988 599999999 9999998887777654 45443
No 3
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=1.4e-74 Score=545.39 Aligned_cols=290 Identities=24% Similarity=0.392 Sum_probs=256.0
Q ss_pred CCCCcEEEcCCCCCCCCChHHHHHHHHHHhhccceEEEEcCCCCCHHHHHHHHHHHHHhhCCCHHHhcccccCCCCcccc
Q 018379 48 LMDIPIIDIGLLTSPSSSSTQELEKLRSALSFWGCFQAINYHGIEPEFLDKMGEVGKQFFDFPPETKHKYSRKDGSTEGY 127 (357)
Q Consensus 48 ~~~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~Gff~l~n~hgi~~~l~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~Gy 127 (357)
..+||||||+.+.+. +.+++++|.+||++||||||+| |||+.++++++++.+++||+||.|+|+++.......+||
T Consensus 4 ~~~iPvIDls~~~~~---~~~~~~~l~~A~~~~GFf~v~n-HGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy 79 (312)
T 3oox_A 4 TSAIDPVSFSLYAKD---FTRFAQELGASFERYGFAVLSD-YDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARGY 79 (312)
T ss_dssp CCSSCCEETHHHHHC---HHHHHHHHHHHHHHHSEEEEES-CCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTSEE
T ss_pred CCCCCeEEChHhccc---HHHHHHHHHHHHHhCcEEEEEC-CCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCcccc
Confidence 457999999987542 2678999999999999999999 999999999999999999999999999997644567899
Q ss_pred ccccccc--cccccccccccccCCC-Ccc-----ccccCcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhH
Q 018379 128 GSDIIIA--EEQTLDWTDRLFLTTS-PKD-----QRQLKFWPEIPESFRETLHEYTTELEKLNEILLKAMAMCLNLEENC 199 (357)
Q Consensus 128 ~~~~~~~--~~~~~d~~e~~~~~~~-p~~-----~~~~n~WP~~~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~ 199 (357)
...+.+. .....||+|+|.+... +.. ...+|.||+.+++||+.+++|+++|.+++..|+++|+++||+++++
T Consensus 80 ~~~g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~ 159 (312)
T 3oox_A 80 IPFGVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDF 159 (312)
T ss_dssp ECCCCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTT
T ss_pred ccccceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHH
Confidence 7654332 2346899999987542 211 1246899999999999999999999999999999999999999999
Q ss_pred HHHHhccccccccceEEeeeCCCCCCCCcccccCccCCCcEEEEeecCCCCceeEee-CCcEEEecCCCCeEEEEccchh
Q 018379 200 FLDMYGEKENATMIARFNFYPPCPRPDLVIGVKPHADASAFTYLLQDKQVEGLQFLK-DNQWYRVPLNPEALVINAGDYA 278 (357)
Q Consensus 200 ~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd~~~~GLqv~~-~g~W~~V~~~~g~~vVnvGd~l 278 (357)
|.+.+. .+.+.||++|||||+.++..+|+++|||+|+||||+|| .++||||+. +|+|++|+|.||++|||+||+|
T Consensus 160 f~~~~~---~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd-~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l 235 (312)
T 3oox_A 160 FKPTVQ---DGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGA-EEGGLEVLDRDGQWLPINPPPGCLVINIGDML 235 (312)
T ss_dssp THHHHT---TCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECC-TTSCEEEECTTSCEEECCCCSSCEEEEECHHH
T ss_pred HHHHhc---CCcceeeeEecCCCCCCcCCcCccceecCceEEEEeEc-CcCceEEECCCCcEEECCCCCCeEEEEhHHHH
Confidence 999885 56789999999999876555999999999999999997 899999986 8999999999999999999999
Q ss_pred HhhhCCcccCCcceeccCC----CCCeEEEEEeecCCCCceEecCCcccCCCCCCCCc-ChH--HHHHHHHHHh
Q 018379 279 EIMSNGIFKSPVHRAVTNS----ERKRMSLAVFCIPNPDREIEPVNGVVNEARPRLYK-KVK--DYVSLYFEYY 345 (357)
Q Consensus 279 ~~~TnG~~~s~~HRV~~~~----~~~R~Si~~F~~P~~d~~i~pl~~~~~~~~p~~y~-~~~--e~~~~~~~~~ 345 (357)
|+||||+|||++|||++++ +.+||||+||++|+.|++|+|+++|+++++|++|+ +++ ||+..++++.
T Consensus 236 ~~~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~~ 309 (312)
T 3oox_A 236 ERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLREI 309 (312)
T ss_dssp HHHTTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHHH
T ss_pred HHHhCCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHHHh
Confidence 9999999999999998763 45799999999999999999999999999999999 999 9999999863
No 4
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=1.9e-70 Score=521.03 Aligned_cols=284 Identities=23% Similarity=0.356 Sum_probs=250.8
Q ss_pred CCCCCcEEEcCCCCCCCCCh-HHHHHHHHHHhhccceEEEEcCCCCCHHHHHHHHHHHHHh-hCCCHHHhcccccCCCCc
Q 018379 47 PLMDIPIIDIGLLTSPSSSS-TQELEKLRSALSFWGCFQAINYHGIEPEFLDKMGEVGKQF-FDFPPETKHKYSRKDGST 124 (357)
Q Consensus 47 ~~~~iPvIDls~l~~~~~~~-~~~~~~l~~A~~~~Gff~l~n~hgi~~~l~~~~~~~~~~f-F~lp~e~K~~~~~~~~~~ 124 (357)
+...||||||+.+.++++++ .+++++|.+||++||||||+| ||| +++++++.+++| |+||.|+|+++..
T Consensus 5 ~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~n-HGi---l~~~~~~~~~~F~F~lP~eeK~~~~~----- 75 (331)
T 1odm_A 5 SKANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVN-HGI---NVQRLSQKTKEFHMSITPEEKWDLAI----- 75 (331)
T ss_dssp CBCCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEES-CCC---CHHHHHHHHHHHHHHCCHHHHHHHBC-----
T ss_pred cCCCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEc-cce---eHHHHHHHHHhccCCCCHHHHHhhhh-----
Confidence 34579999999987765432 678999999999999999999 999 899999999999 9999999999865
Q ss_pred cccccccccc--c------ccccccccccccCCCCc-c---------ccccCcCCCC--chhHHHHHHHHHHHHHHHHHH
Q 018379 125 EGYGSDIIIA--E------EQTLDWTDRLFLTTSPK-D---------QRQLKFWPEI--PESFRETLHEYTTELEKLNEI 184 (357)
Q Consensus 125 ~Gy~~~~~~~--~------~~~~d~~e~~~~~~~p~-~---------~~~~n~WP~~--~~~fr~~~~~y~~~~~~la~~ 184 (357)
+||...+.+. . .+..||+|+|++..... + ...+|.||+. +++||+.+++|+++|.+++..
T Consensus 76 ~Gy~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ 155 (331)
T 1odm_A 76 RAYNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSA 155 (331)
T ss_dssp TTTCTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHH
Confidence 5776543221 1 14689999998875321 1 1247999987 999999999999999999999
Q ss_pred HHHHHHHHcCCChhHHHHHhccccccccceE--EeeeC------C---CCCCCC-cccccCccCCCcEEEEeecCCCCce
Q 018379 185 LLKAMAMCLNLEENCFLDMYGEKENATMIAR--FNFYP------P---CPRPDL-VIGVKPHADASAFTYLLQDKQVEGL 252 (357)
Q Consensus 185 ll~~l~~~Lgl~~~~~~~~~~~~~~~~~~lr--l~~Yp------~---~~~~~~-~~~~~~HtD~~~lTlL~qd~~~~GL 252 (357)
|+++|+++||+++++|.+.+. .+.+.|| ++||| | |+.++. .+|+++|||+|+||||+|| .++||
T Consensus 156 ll~~la~~Lgl~~~~f~~~~~---~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~qd-~v~GL 231 (331)
T 1odm_A 156 LLKGYALALGKEENFFARHFK---PDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQS-NVQNL 231 (331)
T ss_dssp HHHHHHHHTTSCTTTTGGGCC---TTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEEC-SSCCE
T ss_pred HHHHHHHHhCCCHHHHHHHhc---CcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEeeC-CCCCE
Confidence 999999999999999999884 5778999 99999 7 777665 8999999999999999998 89999
Q ss_pred eEee-CCcEEEecCCCCeEEEEccchhHhhhCCcccCCcceeccCCCCCeEEEEEeecCCCCceEecCCcccCCCCCCCC
Q 018379 253 QFLK-DNQWYRVPLNPEALVINAGDYAEIMSNGIFKSPVHRAVTNSERKRMSLAVFCIPNPDREIEPVNGVVNEARPRLY 331 (357)
Q Consensus 253 qv~~-~g~W~~V~~~~g~~vVnvGd~l~~~TnG~~~s~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~~~~~~p~~y 331 (357)
||++ +| |++|+|.||++|||+||+||+||||+|||++|||++ ++++||||+||++|+.|++|.|+++++++++ ++|
T Consensus 232 QV~~~~g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~-~~~~R~Sia~F~~P~~d~~i~pl~~~~~~~~-~~y 308 (331)
T 1odm_A 232 QVETAAG-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKW-VNAERQSLPFFVNLGYDSVIDPFDPREPNGK-SDR 308 (331)
T ss_dssp EEEETTE-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEEC-CCSCEEEEEEEECCCTTCBCCCCCTTSTTCC-CSS
T ss_pred EEEcCCC-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCC-CCCCEEEEEEEEcCCCCCEEeCCCccccccc-cCC
Confidence 9995 78 999999999999999999999999999999999986 4789999999999999999999999999888 899
Q ss_pred cChH--HHHHHHHHHhc
Q 018379 332 KKVK--DYVSLYFEYYQ 346 (357)
Q Consensus 332 ~~~~--e~~~~~~~~~~ 346 (357)
++++ ||++.++++.+
T Consensus 309 ~~~t~~e~l~~~~~~~~ 325 (331)
T 1odm_A 309 EPLSYGDYLQNGLVSLI 325 (331)
T ss_dssp CCCBHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHH
Confidence 9999 99999988754
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=9.5e-71 Score=518.53 Aligned_cols=276 Identities=18% Similarity=0.277 Sum_probs=234.1
Q ss_pred CCCcEEEcCCCCCCCCChHHHHHHHHHHhhccceEEEEcCCCCCHHHHHHHHHHHHHhhCCC-HHHhcccccC-CCCccc
Q 018379 49 MDIPIIDIGLLTSPSSSSTQELEKLRSALSFWGCFQAINYHGIEPEFLDKMGEVGKQFFDFP-PETKHKYSRK-DGSTEG 126 (357)
Q Consensus 49 ~~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~Gff~l~n~hgi~~~l~~~~~~~~~~fF~lp-~e~K~~~~~~-~~~~~G 126 (357)
..||||||+.+.+++. . ++|.+||++||||||+| |||+.++++++++.+++||+|| .|+|+++... ....+|
T Consensus 3 ~~iPvIDls~l~~~~~--~---~~l~~A~~~~GFf~l~n-HGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~G 76 (311)
T 1dcs_A 3 TTVPTFSLAELQQGLH--Q---DEFRRCLRDKGLFYLTD-CGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRG 76 (311)
T ss_dssp CCCCEEEHHHHHTTCS--H---HHHHHHHHHTCEEEEES-SSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSE
T ss_pred CCCcEEEchhhcCCCH--H---HHHHHHHHhCcEEEEEC-CCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCCc
Confidence 3799999998866542 2 28999999999999999 9999999999999999999999 9999999764 356799
Q ss_pred ccccccc------ccccccccccccccCCCCccccccCcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCC----C
Q 018379 127 YGSDIII------AEEQTLDWTDRLFLTTSPKDQRQLKFWPEIPESFRETLHEYTTELEKLNEILLKAMAMCLNL----E 196 (357)
Q Consensus 127 y~~~~~~------~~~~~~d~~e~~~~~~~p~~~~~~n~WP~~~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl----~ 196 (357)
|...+.+ ...+..||+|+|++... +|.|| +++||+.+++|++.|.+++..|+++|+++||+ +
T Consensus 77 y~~~~~e~~~~~~~~~~~~d~~E~~~~~~~------~n~wP--~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~ 148 (311)
T 1dcs_A 77 FTGLESESTAQITNTGSYSDYSMCYSMGTA------DNLFP--SGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGG 148 (311)
T ss_dssp EEEC-----------------CEEEEECSS------SCCCS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTC
T ss_pred eeeccccccccccCCCCCCCcceeeeccCC------CCCCC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCc
Confidence 9876543 22457899999988654 57899 89999999999999999999999999999999 7
Q ss_pred hhHHHHHhccccccccceEEeeeCCCCCCC--C--cccccCccCCCcEEEEeecCCCCc---eeEeeCCcEEEecCCCCe
Q 018379 197 ENCFLDMYGEKENATMIARFNFYPPCPRPD--L--VIGVKPHADASAFTYLLQDKQVEG---LQFLKDNQWYRVPLNPEA 269 (357)
Q Consensus 197 ~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~--~--~~~~~~HtD~~~lTlL~qd~~~~G---Lqv~~~g~W~~V~~~~g~ 269 (357)
+++|.+. .+.||++|||||+.++ + .+|+++|||+|+||||+||+.++| |||+++|+|++|+|.||+
T Consensus 149 ~~~f~~~-------~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~~g~W~~V~p~pg~ 221 (311)
T 1dcs_A 149 VEAFLDC-------EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGGAFTDLPYRPDA 221 (311)
T ss_dssp HHHHHSC-------CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEETTEEEECCCCTTC
T ss_pred HhHHhhc-------chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEeCCEEEeCcCCCCe
Confidence 7777532 6789999999998763 3 788999999999999999646899 999999999999999999
Q ss_pred EEEEccchhHhhhCCcccCCcceeccCC-----CCCeEEEEEeecCCCCceEecCCcccCCCCCCCC--cChH--HHHHH
Q 018379 270 LVINAGDYAEIMSNGIFKSPVHRAVTNS-----ERKRMSLAVFCIPNPDREIEPVNGVVNEARPRLY--KKVK--DYVSL 340 (357)
Q Consensus 270 ~vVnvGd~l~~~TnG~~~s~~HRV~~~~-----~~~R~Si~~F~~P~~d~~i~pl~~~~~~~~p~~y--~~~~--e~~~~ 340 (357)
+|||+||+||+||||+|||++|||+.++ +++||||+||++|+.|++|. +++++++++|++| ++++ ||+..
T Consensus 222 lvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~d~~i~-l~~~~~~~~p~~y~~~~~t~~ey~~~ 300 (311)
T 1dcs_A 222 VLVFCGAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS-VPLARECGFDVSLDGETATFQDWIGG 300 (311)
T ss_dssp EEEEECHHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEE-HHHHHHTTCCCCCCSSEEEHHHHHCS
T ss_pred EEEEHHHHHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCCCCcEEe-CCcccCCCCccccCCCCccHHHHHHH
Confidence 9999999999999999999999999887 67999999999999999999 9999999999999 9999 99987
Q ss_pred HHHHhc
Q 018379 341 YFEYYQ 346 (357)
Q Consensus 341 ~~~~~~ 346 (357)
++++.+
T Consensus 301 ~~~~~~ 306 (311)
T 1dcs_A 301 NYVNIR 306 (311)
T ss_dssp SCCCEE
T ss_pred HHHHHh
Confidence 776544
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=5.4e-66 Score=479.07 Aligned_cols=258 Identities=23% Similarity=0.361 Sum_probs=221.4
Q ss_pred CCCcEEEcCCCCCCCCChHHHHHHHHHHhhccceEEEEcCCCCCHHHHHHHHHHHHHhhCCCHHHhcccccCCCCccccc
Q 018379 49 MDIPIIDIGLLTSPSSSSTQELEKLRSALSFWGCFQAINYHGIEPEFLDKMGEVGKQFFDFPPETKHKYSRKDGSTEGYG 128 (357)
Q Consensus 49 ~~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~Gff~l~n~hgi~~~l~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~Gy~ 128 (357)
++||||||+.. +++++|.+||++||||||+| |||+.++++++++.+++||+| |+|+++.......+||.
T Consensus 2 ~~IPvIDls~~--------~~~~~l~~A~~~~GFF~v~n-HGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~~~~~GY~ 70 (280)
T 3on7_A 2 MKLETIDYRAA--------DSAKRFVESLRETGFGVLSN-HPIDKELVERIYTEWQAFFNS--EAKNEFMFNRETHDGFF 70 (280)
T ss_dssp --CCEEETTST--------THHHHHHHHHHHHSEEEEES-CSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCTTTCCEEE
T ss_pred CCCCEEECCCh--------hHHHHHHHHHHhCCEEEEEC-CCCCHHHHHHHHHHHHHHhhh--HHHHHhccCCCCCCccc
Confidence 57999999862 36789999999999999999 999999999999999999997 89999877666689997
Q ss_pred ccc-ccc--cccccccccccccCCCCccccccCcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCh--hH---H
Q 018379 129 SDI-IIA--EEQTLDWTDRLFLTTSPKDQRQLKFWPEIPESFRETLHEYTTELEKLNEILLKAMAMCLNLEE--NC---F 200 (357)
Q Consensus 129 ~~~-~~~--~~~~~d~~e~~~~~~~p~~~~~~n~WP~~~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~--~~---~ 200 (357)
... .+. .....||+|.|.+. .||..+++||+.+++|+++|.+++.+||++|+++||++. ++ |
T Consensus 71 ~~~~~e~~~~~~~~D~kE~~~~~----------p~~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~ 140 (280)
T 3on7_A 71 PASISETAKGHTVKDIKEYYHVY----------PWGRIPDSLRANILAYYEKANTLASELLEWIETYSPDEIKAKFSIPL 140 (280)
T ss_dssp CCC--------CCCCSCEEEEEC----------TTSCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTCSSCH
T ss_pred cCccccccCCCCcccHHHHHhcC----------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhHHH
Confidence 654 222 22357999988752 377778999999999999999999999999999999863 22 5
Q ss_pred HHHhccccccccceEEeeeCCCCCCC--CcccccCccCCCcEEEEeecCCCCceeEee-CCcEEEecCCCCeEEEEccch
Q 018379 201 LDMYGEKENATMIARFNFYPPCPRPD--LVIGVKPHADASAFTYLLQDKQVEGLQFLK-DNQWYRVPLNPEALVINAGDY 277 (357)
Q Consensus 201 ~~~~~~~~~~~~~lrl~~Yp~~~~~~--~~~~~~~HtD~~~lTlL~qd~~~~GLqv~~-~g~W~~V~~~~g~~vVnvGd~ 277 (357)
.+.+.+ ...+.||++|||||+.++ ..+|+++|||+|+||||+|| .++||||++ +|+|++|+|.||++|||+||+
T Consensus 141 ~~~~~~--~~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd-~~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~ 217 (280)
T 3on7_A 141 PEMIAN--SHKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPTA-NEPGLQVKAKDGSWLDVPSDFGNIIINIGDM 217 (280)
T ss_dssp HHHHTT--CSSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEECC-SCCCEEEECTTSCEEECCCCTTCEEEEECHH
T ss_pred HHHhcC--CccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEec-CCCCeEEEcCCCCEEECcCCCCEEEEEcChH
Confidence 555533 334889999999998765 57999999999999999997 899999996 899999999999999999999
Q ss_pred hHhhhCCcccCCcceeccCC----CCCeEEEEEeecCCCCceEecCCcccCCCCCCCCcChH--HHHHHHHHH
Q 018379 278 AEIMSNGIFKSPVHRAVTNS----ERKRMSLAVFCIPNPDREIEPVNGVVNEARPRLYKKVK--DYVSLYFEY 344 (357)
Q Consensus 278 l~~~TnG~~~s~~HRV~~~~----~~~R~Si~~F~~P~~d~~i~pl~~~~~~~~p~~y~~~~--e~~~~~~~~ 344 (357)
||+||||+|||++|||++++ ..+||||+||++|+.|++|.| +++ ||++.++++
T Consensus 218 l~~~Tng~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~~d~~i~p--------------~ita~~~l~~rl~~ 276 (280)
T 3on7_A 218 LQEASDGYFPSTSHRVINPEGTDKTKSRISLPLFLHPHPSVVLSE--------------RYTADSYLMERLRE 276 (280)
T ss_dssp HHHHTTTSSCCCCEEEECCTTCCTTSCEEECCEEECCCTTCBCSS--------------SCBHHHHHHHHHHH
T ss_pred HHHHhCCcccCCCceEeCCCCCCCCCCeEEEEEEEcCCCCCEECC--------------CccHHHHHHHHHHH
Confidence 99999999999999999874 458999999999999999985 367 999999986
No 7
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=95.61 E-value=0.28 Score=43.56 Aligned_cols=83 Identities=17% Similarity=0.186 Sum_probs=56.5
Q ss_pred cceEEeeeCCCCCCCCcccccCccCCC-----cEEEEeecCC-------CCceeEeeCC--cEEEecCCCCeEEEEccch
Q 018379 212 MIARFNFYPPCPRPDLVIGVKPHADAS-----AFTYLLQDKQ-------VEGLQFLKDN--QWYRVPLNPEALVINAGDY 277 (357)
Q Consensus 212 ~~lrl~~Yp~~~~~~~~~~~~~HtD~~-----~lTlL~qd~~-------~~GLqv~~~g--~W~~V~~~~g~~vVnvGd~ 277 (357)
.-+.+.+|++. .-...+|.|.. .+|+++.=|. .|-|.+...+ ....|.|..|.+|++-.+.
T Consensus 117 ~e~~~~~Y~~~-----G~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~~ 191 (247)
T 2hbt_A 117 TKAMVACYPGN-----GTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDR 191 (247)
T ss_dssp CCEEEEEECSS-----SCCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECST
T ss_pred ceEEEEEecCC-----CCcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecCC
Confidence 34678899851 22346777762 6888876322 3336777743 6789999999999886431
Q ss_pred hHhhhCCcccCCcceeccCCCCCeEEEEEeecC
Q 018379 278 AEIMSNGIFKSPVHRAVTNSERKRMSLAVFCIP 310 (357)
Q Consensus 278 l~~~TnG~~~s~~HRV~~~~~~~R~Si~~F~~P 310 (357)
-.+|.|.. ..+.|+||+.++.-
T Consensus 192 ----------~~~H~V~p-~~~~R~sit~W~~~ 213 (247)
T 2hbt_A 192 ----------RNPHEVQP-AYATRYAITVWYFD 213 (247)
T ss_dssp ----------TCCEEECC-BSSCEEEEEEEEEE
T ss_pred ----------Cceeeecc-CCCEEEEEEEEEcC
Confidence 16899975 45699999987653
No 8
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=95.25 E-value=0.098 Score=46.47 Aligned_cols=81 Identities=16% Similarity=0.126 Sum_probs=54.4
Q ss_pred ccceEEeeeCCCCCCCCcccccCccCCC-----------cEEEEeecCC----C-CceeEeeCCcEEEecCCCCeEEEEc
Q 018379 211 TMIARFNFYPPCPRPDLVIGVKPHADAS-----------AFTYLLQDKQ----V-EGLQFLKDNQWYRVPLNPEALVINA 274 (357)
Q Consensus 211 ~~~lrl~~Yp~~~~~~~~~~~~~HtD~~-----------~lTlL~qd~~----~-~GLqv~~~g~W~~V~~~~g~~vVnv 274 (357)
..-+++++|.+-. ...+|.|.. .+|+++.=+. . |.|.+.....=..|.|..|.+|+.-
T Consensus 98 ~e~~~~~rY~~G~------~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~~~~V~P~~G~~v~F~ 171 (243)
T 3dkq_A 98 FYPPLFNRYQGGE------TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYGQQSIKLSAGSLVLYP 171 (243)
T ss_dssp EEEEEEEEECTTC------EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTEEEEECCCTTCEEEEE
T ss_pred cccceEEEECCCC------eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCCcEEEecCCCEEEEEC
Confidence 3458899998732 246777753 4666655322 2 3466666433467999999999874
Q ss_pred cchhHhhhCCcccCCcceeccCCCCCeEEEEEeec
Q 018379 275 GDYAEIMSNGIFKSPVHRAVTNSERKRMSLAVFCI 309 (357)
Q Consensus 275 Gd~l~~~TnG~~~s~~HRV~~~~~~~R~Si~~F~~ 309 (357)
. .++|+|..-....|+++..+++
T Consensus 172 s------------~~lH~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 172 S------------SSLHQVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp T------------TSEEEECCEEEECEEEEEEEEE
T ss_pred C------------CCeEcCccccccCEEEEEEehh
Confidence 2 3699997544469999999886
No 9
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=89.60 E-value=6.8 Score=33.69 Aligned_cols=43 Identities=12% Similarity=0.043 Sum_probs=33.1
Q ss_pred CcEEEecCCCCeEEEEccchhHhhhCCcccCCcceeccCCC-CCeEEEEEeecCCC
Q 018379 258 NQWYRVPLNPEALVINAGDYAEIMSNGIFKSPVHRAVTNSE-RKRMSLAVFCIPNP 312 (357)
Q Consensus 258 g~W~~V~~~~g~~vVnvGd~l~~~TnG~~~s~~HRV~~~~~-~~R~Si~~F~~P~~ 312 (357)
..+..|.|.+|.+||.-+. ..|.|..+.. ++|+||+|-+.+..
T Consensus 166 ~~~~~i~P~~G~lvlFpS~------------l~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESW------------LRHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp CSEEEECCCTTEEEEEETT------------SCEEECCCCSSSCEEEEEEEEEC--
T ss_pred CCeeEecCCCCeEEEECCC------------CEEeccCCCCCCCEEEEEEEeecCC
Confidence 3567899999999987653 3799987654 68999999998865
No 10
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=84.63 E-value=3.4 Score=36.20 Aligned_cols=81 Identities=20% Similarity=0.213 Sum_probs=53.7
Q ss_pred ceEEeeeCCCCCCCCcccccCccCC--------CcEEEEeecCCCCceeEee-C----------CcEEEecCCCCeEEEE
Q 018379 213 IARFNFYPPCPRPDLVIGVKPHADA--------SAFTYLLQDKQVEGLQFLK-D----------NQWYRVPLNPEALVIN 273 (357)
Q Consensus 213 ~lrl~~Yp~~~~~~~~~~~~~HtD~--------~~lTlL~qd~~~~GLqv~~-~----------g~W~~V~~~~g~~vVn 273 (357)
.+-+|+|.+- .-++++|.|- ...||-+. ...=+.+.. . +..+.+...+|+++|.
T Consensus 127 ~~LvN~Y~~G-----~d~i~~H~D~~~~~~~~~~IaslSLG--~~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM 199 (238)
T 2iuw_A 127 SLLCNLYRNE-----KDSVDWHSDDEPSLGRCPIIASLSFG--ATRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIM 199 (238)
T ss_dssp EEEEEEECST-----TCCEEEECCCCGGGCSSCCEEEEEEE--SCEEEEEEECCC--------CCCEEEEEECTTCEEEE
T ss_pred EEEEEEECCC-----CCceeCCcCChhhcCCCCcEEEEECC--CCEEEEEeccCCccccCcccCCceEEEEcCCCCEEEE
Confidence 4578999872 3468889885 23344332 122233333 1 3689999999999999
Q ss_pred ccchhHhhhCCcccCCcceeccC--CCCCeEEEEEee
Q 018379 274 AGDYAEIMSNGIFKSPVHRAVTN--SERKRMSLAVFC 308 (357)
Q Consensus 274 vGd~l~~~TnG~~~s~~HRV~~~--~~~~R~Si~~F~ 308 (357)
-|++=..|. |.|... ....|+|+.|=.
T Consensus 200 ~G~~r~~w~--------H~I~~~~~~~~~RIsLTfR~ 228 (238)
T 2iuw_A 200 EGATQADWQ--------HRVPKEYHSREPRVNLTFRT 228 (238)
T ss_dssp EETHHHHEE--------EEECCCSSCCCCEEEEEEEC
T ss_pred ChhhhCccE--------ecCCCcCCCCCCEEEEEeee
Confidence 999877775 454321 246899999965
No 11
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=84.29 E-value=3.1 Score=35.56 Aligned_cols=80 Identities=15% Similarity=0.099 Sum_probs=52.5
Q ss_pred ceEEeeeCCCCCCCCcccccCccCCC--------cEEEEeecCCCCceeEeeC----------CcEEEecCCCCeEEEEc
Q 018379 213 IARFNFYPPCPRPDLVIGVKPHADAS--------AFTYLLQDKQVEGLQFLKD----------NQWYRVPLNPEALVINA 274 (357)
Q Consensus 213 ~lrl~~Yp~~~~~~~~~~~~~HtD~~--------~lTlL~qd~~~~GLqv~~~----------g~W~~V~~~~g~~vVnv 274 (357)
.+-+|+|.+ +.-++++|.|-. ..++-+. ...-+.+... +..+.+...+|+++|.-
T Consensus 101 ~~LvN~Y~~-----G~d~i~~H~D~~~~~~~~~~IasvSLG--~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~ 173 (204)
T 3s57_A 101 FVLINRYKD-----GSDHICEHRDDERELAPGSPIASVSFG--ASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMN 173 (204)
T ss_dssp EEEEEEESS-----TTCCEEEECCCCTTBCTTCCEEEEEEE--SCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEE
T ss_pred eeEEEEECC-----CCCcccceecChhhccCCCcEEEEECC--CceEEEEEEcCCCccccccCCceEEEECCCCCEEEEC
Confidence 356899987 233688898862 2344332 2233444431 25788999999999999
Q ss_pred cchhHhhhCCcccCCcceeccCC--CCCeEEEEEe
Q 018379 275 GDYAEIMSNGIFKSPVHRAVTNS--ERKRMSLAVF 307 (357)
Q Consensus 275 Gd~l~~~TnG~~~s~~HRV~~~~--~~~R~Si~~F 307 (357)
|++=..|. |.|-... ...|+|+.|=
T Consensus 174 g~~q~~w~--------H~Ip~~~~~~~~RislTFR 200 (204)
T 3s57_A 174 HPTNTHWY--------HSLPVRKKVLAPRVNLTFR 200 (204)
T ss_dssp TTHHHHEE--------EEECCCTTCCSCEEEEEEE
T ss_pred chhhheeE--------eeccccCCCCCCEEEEEee
Confidence 98877784 6664322 3589999984
No 12
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=82.41 E-value=5.3 Score=34.41 Aligned_cols=89 Identities=12% Similarity=0.076 Sum_probs=54.5
Q ss_pred ceEEeeeCCCCCCCCcccccCccCC--------------CcEEEEeecCC--CCc-eeEeeCC-------------cEEE
Q 018379 213 IARFNFYPPCPRPDLVIGVKPHADA--------------SAFTYLLQDKQ--VEG-LQFLKDN-------------QWYR 262 (357)
Q Consensus 213 ~lrl~~Yp~~~~~~~~~~~~~HtD~--------------~~lTlL~qd~~--~~G-Lqv~~~g-------------~W~~ 262 (357)
-+++++|.+-. ...+|.|+ ..+|+|+.-+. .|| +.+...+ .-+.
T Consensus 99 ~~qv~rY~~G~------~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~c~~~~~~ 172 (224)
T 2jig_A 99 GLQVLHYHDGQ------KYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNAEQKVTGDGWSECAKRGLA 172 (224)
T ss_dssp CCEEEEEETTC------CEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETTSSSCCCSTTSCTTGGGSEE
T ss_pred ceEEEecCCCc------cccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCCcccccccccccccccCceE
Confidence 47888888632 13456664 25788865322 233 4443221 2478
Q ss_pred ecCCCCeEEEEccchhHhhhCCcc-cCCcceeccCCCCCeEEEEEeecCC
Q 018379 263 VPLNPEALVINAGDYAEIMSNGIF-KSPVHRAVTNSERKRMSLAVFCIPN 311 (357)
Q Consensus 263 V~~~~g~~vVnvGd~l~~~TnG~~-~s~~HRV~~~~~~~R~Si~~F~~P~ 311 (357)
|.|..|.+|+.-- ...+|.. ..++|+|..-....||++..+++-.
T Consensus 173 V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~~ 218 (224)
T 2jig_A 173 VKPIKGDALMFYS----LKPDGSNDPASLHGSCPTLKGDKWSATKWIHVA 218 (224)
T ss_dssp ECCCTTCEEEEES----BCTTSCBCGGGCEEECCEEESEEEEEEEEEESS
T ss_pred EecccCcEEEEEe----eCCCCCCCCCCcccCCccccceEEEEEEeEEcC
Confidence 9999999887643 1223432 5789999754445899999888644
No 13
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=82.09 E-value=4.2 Score=34.96 Aligned_cols=80 Identities=19% Similarity=0.156 Sum_probs=52.2
Q ss_pred cceEEeeeCCCCCCCCcccccCccCC-----C--cEEEEeecCCCCceeEee---CCcEEEecCCCCeEEEEccchhHhh
Q 018379 212 MIARFNFYPPCPRPDLVIGVKPHADA-----S--AFTYLLQDKQVEGLQFLK---DNQWYRVPLNPEALVINAGDYAEIM 281 (357)
Q Consensus 212 ~~lrl~~Yp~~~~~~~~~~~~~HtD~-----~--~lTlL~qd~~~~GLqv~~---~g~W~~V~~~~g~~vVnvGd~l~~~ 281 (357)
..+-+|+|.+ +. ++++|.|- + .+|+-+. ...-+.+.. .+....+...+|+++|.-|++- .|
T Consensus 105 n~~LvN~Y~~-----G~-~i~~H~D~~e~~~~~pI~svSLG--~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r-~~ 175 (211)
T 3i3q_A 105 DACLINRYAP-----GA-KLSLHQDKDEPDLRAPIVSVSLG--LPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESR-LF 175 (211)
T ss_dssp CEEEEEEECT-----TC-CEEEECCCCCSCTTSCEEEEEEE--SCEEEEECCSSTTSCCEEEEECTTCEEEECGGGT-TC
T ss_pred CEEEEEEEcC-----CC-CcccccCCCccccCCCEEEEECC--CCeEEEEecccCCCceEEEECCCCCEEEECchHH-ce
Confidence 3467899987 33 78999993 2 3344443 223344443 3568899999999999988762 22
Q ss_pred hCCcccCCcceeccCC-------CCCeEEEEEee
Q 018379 282 SNGIFKSPVHRAVTNS-------ERKRMSLAVFC 308 (357)
Q Consensus 282 TnG~~~s~~HRV~~~~-------~~~R~Si~~F~ 308 (357)
.|.|.... +..|+|+.|-.
T Consensus 176 --------~H~I~~~~~~~~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 176 --------YHGIQPLKAGFHPLTIDCRYNLTFRQ 201 (211)
T ss_dssp --------CEEECCCCCCCBTTTBTCEEEEEEEC
T ss_pred --------EeccCcccCCcCCCCCCCEEEEEeee
Confidence 47775432 13599999865
No 14
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=81.18 E-value=8.2 Score=33.23 Aligned_cols=86 Identities=13% Similarity=-0.041 Sum_probs=52.3
Q ss_pred ceEEeeeCCCCCCCCcccccCccCCC-----------cEEEEeecCC--CCc-eeEeeCCcEEEecCCCCeEEEEccchh
Q 018379 213 IARFNFYPPCPRPDLVIGVKPHADAS-----------AFTYLLQDKQ--VEG-LQFLKDNQWYRVPLNPEALVINAGDYA 278 (357)
Q Consensus 213 ~lrl~~Yp~~~~~~~~~~~~~HtD~~-----------~lTlL~qd~~--~~G-Lqv~~~g~W~~V~~~~g~~vVnvGd~l 278 (357)
-+++++|.+... ..+|.|+. .+|+++.-+. .|| +.+... =+.|.|..|.+|+.-.-
T Consensus 112 ~lqv~~Y~~G~~------y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~--~~~V~P~~G~al~f~~~-- 181 (216)
T 3itq_A 112 GLHILNYEVDQQ------YKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETFFPKL--NLSVHPRKGMAVYFEYF-- 181 (216)
T ss_dssp CCEEEEECBTCC------EEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEEETTT--TEEECCCTTCEEEEECC--
T ss_pred ceeEEEeCCCCc------cccccCCCcCCCcccCCceEEEEEEecccCCcCceeEecCC--CCEEecCCCeEEEEecc--
Confidence 478888876322 35676653 4787776322 233 332222 26789999998876531
Q ss_pred HhhhCCc-ccCCcceeccCCCCCeEEEEEeecC
Q 018379 279 EIMSNGI-FKSPVHRAVTNSERKRMSLAVFCIP 310 (357)
Q Consensus 279 ~~~TnG~-~~s~~HRV~~~~~~~R~Si~~F~~P 310 (357)
..+|. -..++|+|..-....|+++..+++-
T Consensus 182 --~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~~ 212 (216)
T 3itq_A 182 --YQDQSLNELTLHGGAPVTKGEKWIATQWVRR 212 (216)
T ss_dssp --CSSHHHHHTTCEEECCEEESCEEEEEEEEES
T ss_pred --CCCCCCCCccccccceeccccEEEEEeeEec
Confidence 11222 2468999975444589999888753
No 15
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=74.72 E-value=5.1 Score=37.24 Aligned_cols=106 Identities=17% Similarity=0.164 Sum_probs=66.5
Q ss_pred cceEEeeeCCCCCCCCcccccCccCCC------cEEEEeecCCCCceeEee-CCcEEEecCCCCeEEEEccchhHhhhCC
Q 018379 212 MIARFNFYPPCPRPDLVIGVKPHADAS------AFTYLLQDKQVEGLQFLK-DNQWYRVPLNPEALVINAGDYAEIMSNG 284 (357)
Q Consensus 212 ~~lrl~~Yp~~~~~~~~~~~~~HtD~~------~lTlL~qd~~~~GLqv~~-~g~W~~V~~~~g~~vVnvGd~l~~~TnG 284 (357)
..+-+|+|.+ +. ++++|.|-. ..|+-+. ...-+.+.. +|.++.+...+|+++|.-|++=..|.-|
T Consensus 198 n~~lvN~Y~~-----G~-~I~~H~D~~~~~~~~I~slSLG--~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~w~H~ 269 (345)
T 3tht_A 198 DQMTINQYEP-----GQ-GIPAHIDTHSAFEDEIVSLSLG--SEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTHG 269 (345)
T ss_dssp SEEEEEEECT-----TC-CEEEECCCTTTBCSCEEEEEES--SCEEEEEECTTSCEEEEEECTTEEEEECTHHHHTSEEE
T ss_pred CEEEEEEecC-----CC-CEeeccCCchhcCCeEEEEECC--CceeEEEccCCCceEEEEcCCCcEEEEChHHhhceEcc
Confidence 4567889986 22 788999884 3344332 223344444 5679999999999999999998888666
Q ss_pred cccCCcceecc------------------CCCCCeEEEEEeecCCCCceEecCCcccCCC
Q 018379 285 IFKSPVHRAVT------------------NSERKRMSLAVFCIPNPDREIEPVNGVVNEA 326 (357)
Q Consensus 285 ~~~s~~HRV~~------------------~~~~~R~Si~~F~~P~~d~~i~pl~~~~~~~ 326 (357)
.-+-...-+-. -+...|+|+.|=.-+...+.. .-+.+++..
T Consensus 270 I~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~~~c~C-~~~~~cd~~ 328 (345)
T 3tht_A 270 ITCRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQTPCNC-SYPLVCDSQ 328 (345)
T ss_dssp ECCCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCSSCCCC-SCTTTCTTT
T ss_pred CCcccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCCCCcCC-CCCCcccCC
Confidence 54433322210 012369999998766653322 234445543
No 16
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=49.39 E-value=5.8 Score=37.40 Aligned_cols=52 Identities=17% Similarity=0.207 Sum_probs=39.9
Q ss_pred CCcEEEcCCCCCCCCChHHHHHHHHHHhhccceEEEEcCCCCCHHHHHHHHHHHHHhhCC
Q 018379 50 DIPIIDIGLLTSPSSSSTQELEKLRSALSFWGCFQAINYHGIEPEFLDKMGEVGKQFFDF 109 (357)
Q Consensus 50 ~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~Gff~l~n~hgi~~~l~~~~~~~~~~fF~l 109 (357)
++|.||++++... .+.+.++.+|+.++|++.+.| -.++.+ ...+.++.|=.+
T Consensus 122 ~~~~~~~~~~l~~----d~~~~~~~~~l~~~Gvv~frg-~~~~~~---~~~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDVLRY----DEHAYKWLSTLKKVGIVRLTG-ASDKPG---EVSKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHHHHC----HHHHHHHHHHHHHHSEEEEEC-CCSSTT---HHHHHHHHHSCC
T ss_pred CCCccCHHHHhcC----HHHHHHHHHHHHhcCEEEEeC-CCCCHH---HHHHHHHHhCCC
Confidence 6899999887643 478899999999999999999 777754 344556666443
No 17
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=48.00 E-value=6.5 Score=37.75 Aligned_cols=53 Identities=11% Similarity=0.112 Sum_probs=39.7
Q ss_pred CCCcEEEcCCCCCCCCChHHHHHHHHHHhhccceEEEEcCCCCCHHHHHHHHHHHHHhhC
Q 018379 49 MDIPIIDIGLLTSPSSSSTQELEKLRSALSFWGCFQAINYHGIEPEFLDKMGEVGKQFFD 108 (357)
Q Consensus 49 ~~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~Gff~l~n~hgi~~~l~~~~~~~~~~fF~ 108 (357)
..||.||++++.++. +.++..+.+++.|++.|.| -||.+......+.+.+|.+
T Consensus 99 ~~iP~i~f~di~~~~-----~s~~~~~~ir~rG~vVIRg--vvp~e~A~~~~~~~~~yl~ 151 (461)
T 2dbn_A 99 AVWPVLSYADIKAGH-----VTAEQREQIKRRGCAVIKG--HFPREQALGWDQSMLDYLD 151 (461)
T ss_dssp CSSCEEEHHHHHHTC-----CCHHHHHHHHHHSEEEEET--SSCHHHHHHHHHHHHHHHH
T ss_pred CCcceecHHHhcCCC-----CCHHHHHHHHhccEEEECC--CCCHHHHHHHHHHHHHHHH
Confidence 479999999876543 2234556778899999998 6898888777777777753
No 18
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=45.58 E-value=12 Score=31.80 Aligned_cols=36 Identities=22% Similarity=0.205 Sum_probs=29.5
Q ss_pred CCcEEEcCCCCCCCCChHHHHHHHHHHhhccceEEEEcCCCC
Q 018379 50 DIPIIDIGLLTSPSSSSTQELEKLRSALSFWGCFQAINYHGI 91 (357)
Q Consensus 50 ~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~Gff~l~n~hgi 91 (357)
.||++++.... + .++++.+.+++.+.-.+.+.| ||+
T Consensus 125 ~v~~~~y~~~g--~---~~la~~i~~~l~~~~avll~n-HG~ 160 (212)
T 2opi_A 125 EIPVIPYYRPG--S---PELAKAVVEAMLKHNSVLLTN-HGQ 160 (212)
T ss_dssp CCCEECCCCTT--C---HHHHHHHHHHTSSCSEEEETT-TEE
T ss_pred CeEEEcCCCCC--c---HHHHHHHHHHhccCCEEEEcC-CCc
Confidence 69999886532 2 678889999998888999999 996
No 19
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=44.89 E-value=17 Score=32.15 Aligned_cols=50 Identities=18% Similarity=0.163 Sum_probs=37.5
Q ss_pred CCCcEEEcCCCCCCCCChHHHHHHHHHHhhccceEEEEcCCCCCHHHHHHHHHHHHHhh
Q 018379 49 MDIPIIDIGLLTSPSSSSTQELEKLRSALSFWGCFQAINYHGIEPEFLDKMGEVGKQFF 107 (357)
Q Consensus 49 ~~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~Gff~l~n~hgi~~~l~~~~~~~~~~fF 107 (357)
++|+-||+++..+ .+..++|.+++.++|++.+.| -.++.+. ..+.++.|=
T Consensus 16 aei~gvdl~~~l~-----~~~~~~l~~~l~~~Gvv~frg-~~~~~~~---~~~~~~~~G 65 (283)
T 1otj_A 16 AQISGADLTRPLS-----DNQFEQLYHAVLRHQVVFLRD-QAITPQQ---QRALAQRFG 65 (283)
T ss_dssp EEEESCCSSSCCC-----HHHHHHHHHHHHHHSEEEECS-CCCCHHH---HHHHHHTTS
T ss_pred EEEECCCcCccCC-----HHHHHHHHHHHHHCCEEEECC-CCCCHHH---HHHHHHHhC
Confidence 3678889988553 567899999999999999999 7777643 344555553
No 20
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=39.55 E-value=17 Score=30.96 Aligned_cols=36 Identities=19% Similarity=0.198 Sum_probs=29.2
Q ss_pred CCcEEEcCCCCCCCCChHHHHHHHHHHhhccceEEEEcCCCC
Q 018379 50 DIPIIDIGLLTSPSSSSTQELEKLRSALSFWGCFQAINYHGI 91 (357)
Q Consensus 50 ~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~Gff~l~n~hgi 91 (357)
.||++++.... + .+.++.+.+++.+.-.+.+.| ||+
T Consensus 122 ~ip~~~y~~~g--~---~~la~~i~~~l~~~~avll~n-HG~ 157 (215)
T 1e4c_P 122 SIPCAPYATFG--T---RELSEHVALALKNRKATLLQH-HGL 157 (215)
T ss_dssp CBCEECCCCTT--C---HHHHHHHHHHTSSCSEEEETT-TEE
T ss_pred CcceeeCCCCC--c---HHHHHHHHHHhccCCEEEEcC-CCc
Confidence 68999886532 2 578888999998888999999 996
No 21
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=37.19 E-value=27 Score=31.24 Aligned_cols=51 Identities=10% Similarity=0.070 Sum_probs=38.1
Q ss_pred CCCcEEEcCCCCCCCCChHHHHHHHHHHhhccceEEEEcCCC-CCHHHHHHHHHHHHHhhC
Q 018379 49 MDIPIIDIGLLTSPSSSSTQELEKLRSALSFWGCFQAINYHG-IEPEFLDKMGEVGKQFFD 108 (357)
Q Consensus 49 ~~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~Gff~l~n~hg-i~~~l~~~~~~~~~~fF~ 108 (357)
++|+-||+++..+ .+..++|.+++.++|++.+.| -. ++. +...+.++.|=.
T Consensus 26 aei~gvdl~~~l~-----~~~~~~l~~~l~~~Gvv~fRg-~~~l~~---~~~~~~~~~fG~ 77 (301)
T 1oih_A 26 AEIRGVKLSPDLD-----AATVEAIQAALVRHKVIFFRG-QTHLDD---QSQEGFAKLLGE 77 (301)
T ss_dssp EEEESCCCCTTCC-----HHHHHHHHHHHHHHSEEEECC-CTTCCH---HHHHHHHHTTSC
T ss_pred eEEeCCCccccCC-----HHHHHHHHHHHHHCCEEEECC-CCCCCH---HHHHHHHHHhCC
Confidence 3577788887553 567899999999999999999 76 775 345555666643
No 22
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=35.90 E-value=21 Score=30.11 Aligned_cols=36 Identities=14% Similarity=0.219 Sum_probs=28.4
Q ss_pred CCcEE-EcCCCCCCCCChHHHHHHHHHHhhccceEEEEcCCCC
Q 018379 50 DIPII-DIGLLTSPSSSSTQELEKLRSALSFWGCFQAINYHGI 91 (357)
Q Consensus 50 ~iPvI-Dls~l~~~~~~~~~~~~~l~~A~~~~Gff~l~n~hgi 91 (357)
.||++ ++.... + .++++.+.+++.+.-.+.+.| ||+
T Consensus 117 ~ip~~~~y~~~g--~---~ela~~i~~~l~~~~avll~n-HG~ 153 (200)
T 2fk5_A 117 EVPVLAPKTVSA--T---EEAALSVAEALREHRACLLRG-HGA 153 (200)
T ss_dssp CEEEECCSCCSS--S---HHHHHHHHHHHHHCSEEEETT-TEE
T ss_pred CceEecCCCCCC--c---HHHHHHHHHHhCcCCEEEECC-CCc
Confidence 69999 775432 2 678888899998888999999 995
No 23
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=35.81 E-value=24 Score=30.50 Aligned_cols=36 Identities=14% Similarity=-0.008 Sum_probs=29.4
Q ss_pred CCcEEEcCCCCCCCCChHHHHHHHHHHhhccceEEEEcCCCC
Q 018379 50 DIPIIDIGLLTSPSSSSTQELEKLRSALSFWGCFQAINYHGI 91 (357)
Q Consensus 50 ~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~Gff~l~n~hgi 91 (357)
.||++++... ++ .++++++.+++.+.-.+.+.| ||+
T Consensus 161 ~v~~~~y~~~--g~---~ela~~i~~~l~~~~avll~n-HG~ 196 (238)
T 1pvt_A 161 GISVVEFEKP--GS---VELGLKTVEKSEGKDAVLWDK-HGV 196 (238)
T ss_dssp CCEEECCCST--TC---HHHHHHHHHHTSSCSEEEETT-SCE
T ss_pred CceEecCCCC--Cc---HHHHHHHHHHhccCCEEEEcC-CCc
Confidence 6999988643 23 678888999998888999999 996
No 24
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=30.93 E-value=33 Score=30.37 Aligned_cols=51 Identities=24% Similarity=0.265 Sum_probs=38.7
Q ss_pred CCCcEEEcCCCCCCCCChHHHHHHHHHHhhccceEEEEcCCCCCHHHHHHHHHHHHHhhC
Q 018379 49 MDIPIIDIGLLTSPSSSSTQELEKLRSALSFWGCFQAINYHGIEPEFLDKMGEVGKQFFD 108 (357)
Q Consensus 49 ~~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~Gff~l~n~hgi~~~l~~~~~~~~~~fF~ 108 (357)
++|.=|||++.++ .+..++|.+|+.++|.+.+.| -.++.+ +..+.++.|=.
T Consensus 14 aei~gvdl~~~l~-----~~~~~~l~~~l~~~gvv~fR~-q~l~~~---~~~~fa~~fG~ 64 (277)
T 3pvj_A 14 AQISGVDISRDIS-----AEERDAIEQALLQHQVLFLRD-QPINPE---QQARFAARFGD 64 (277)
T ss_dssp EEEESCCTTSCCC-----HHHHHHHHHHHHHHSEEEESS-CCCCHH---HHHHHHGGGSC
T ss_pred EEEeCCCccccCC-----HHHHHHHHHHHHHCCEEEECC-CCCCHH---HHHHHHHHhCC
Confidence 4677789987543 578899999999999999999 788764 34455666643
No 25
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=30.21 E-value=48 Score=28.65 Aligned_cols=43 Identities=16% Similarity=0.197 Sum_probs=33.4
Q ss_pred cEEEcCCCCCCCCChHHHHHHHHHHhhccceEEEEcCCCCCHHHHHHHHHH
Q 018379 52 PIIDIGLLTSPSSSSTQELEKLRSALSFWGCFQAINYHGIEPEFLDKMGEV 102 (357)
Q Consensus 52 PvIDls~l~~~~~~~~~~~~~l~~A~~~~Gff~l~n~hgi~~~l~~~~~~~ 102 (357)
-+|||+. ++.+....+.|.+.|.=.|++|.|.+.+..+.+.++
T Consensus 56 VvIDFT~--------P~a~~~~~~~~~~~g~~~ViGTTG~~~~~~~~l~~~ 98 (228)
T 1vm6_A 56 VVIDFSS--------PEALPKTVDLCKKYRAGLVLGTTALKEEHLQMLREL 98 (228)
T ss_dssp EEEECSC--------GGGHHHHHHHHHHHTCEEEECCCSCCHHHHHHHHHH
T ss_pred EEEECCC--------HHHHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHH
Confidence 5889974 467777788888999999999889998766555443
No 26
>3pnt_A NAD+-glycohydrolase; glycohydrolase, NAD+, virulence factor, hydrolase-hydrolase complex; 2.80A {Streptococcus pyogenes}
Probab=29.53 E-value=25 Score=29.81 Aligned_cols=53 Identities=19% Similarity=0.284 Sum_probs=38.8
Q ss_pred CCCCCCccccCCCCCCCcCCCCCCCCCcEEEcCCCCCCCCChHHHHHHHHHHhhccceEEEEcCCC
Q 018379 25 GKELPESYIYKGSDARSLDASLPLMDIPIIDIGLLTSPSSSSTQELEKLRSALSFWGCFQAINYHG 90 (357)
Q Consensus 25 ~~~~p~~y~~p~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~Gff~l~n~hg 90 (357)
+++||.+=.|-+..-. .+.++.-.|.||...+.+ .+ +..|.+..|+|-|+| .-
T Consensus 188 sLNIPG~qTwaGkni~---~SeSELimPSId~kgls~-----~d----vLaaIe~kGYyEI~n-Pt 240 (268)
T 3pnt_A 188 SLNIPGCQTWSGKHIE---NSESELIFPSISVKDLKS-----KA----VLAEIDAKGYFEIID-PT 240 (268)
T ss_dssp TTCCTTTCCCCTTCGG---GCCCCEEECEEECTTCCH-----HH----HHHHHHHHSCCEEES-CE
T ss_pred ccCCCccccccccccc---ccccceeecccccCCCcH-----HH----HHHHHhhcCeEEecC-Ce
Confidence 5788888888777653 234555689999998764 33 556667889999999 54
No 27
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=29.08 E-value=26 Score=31.12 Aligned_cols=36 Identities=8% Similarity=-0.027 Sum_probs=29.0
Q ss_pred CCcEEEcCCCCCCCCChHHHHHHHHHHhhccceEEEEcCCCC
Q 018379 50 DIPIIDIGLLTSPSSSSTQELEKLRSALSFWGCFQAINYHGI 91 (357)
Q Consensus 50 ~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~Gff~l~n~hgi 91 (357)
.||++++... ++ .+.++.+.+++.+.-.+.+.| ||+
T Consensus 179 ~v~v~~y~~~--g~---~ela~~i~~~l~~~~avll~n-HG~ 214 (274)
T 2v9l_A 179 GVGILPWMVP--GT---DAIGQATAQEMQKHSLVLWPF-HGV 214 (274)
T ss_dssp CEEECCCCCS--SS---HHHHHHHHHHHTTCSEEEETT-TEE
T ss_pred ceeEecCCCC--CC---HHHHHHHHHHHccCCEEEEcC-CCc
Confidence 5888887543 22 678888999999889999999 996
No 28
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=29.03 E-value=88 Score=26.29 Aligned_cols=43 Identities=16% Similarity=0.183 Sum_probs=31.0
Q ss_pred EEEccchhHhhhCCcc----cCCcceeccCCCCCeEEEEE-eecCCCC
Q 018379 271 VINAGDYAEIMSNGIF----KSPVHRAVTNSERKRMSLAV-FCIPNPD 313 (357)
Q Consensus 271 vVnvGd~l~~~TnG~~----~s~~HRV~~~~~~~R~Si~~-F~~P~~d 313 (357)
-+.||+.-..|..|.. -|-.|.|.+.+...|+-+.+ |.+|+..
T Consensus 140 ~i~V~~~~~~w~eGe~~~fDds~~Hev~N~~d~~RvvL~~D~~rPdl~ 187 (197)
T 3rcq_A 140 KIRCANETKTWEEGKVLIFDDSFEHEVWQDASSFRLIFIVDVWHPELT 187 (197)
T ss_dssp EEEETTEEECCCBTCEEEECTTSCEEEEECSSSCEEEEEEEEECTTSC
T ss_pred EEEECCEEEEeeCCcEEEEcCCeEEEEEECCCCCEEEEEEeeeCCCCC
Confidence 3456777777777763 47789999988888977766 5677653
No 29
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=27.84 E-value=1.9e+02 Score=28.85 Aligned_cols=101 Identities=11% Similarity=0.107 Sum_probs=59.6
Q ss_pred HHHHHHHHHcCCChhHHHHHhccccccccceEEeeeCCCCCCCCcccccCccCC-C--cEEEEeecC---------CCCc
Q 018379 184 ILLKAMAMCLNLEENCFLDMYGEKENATMIARFNFYPPCPRPDLVIGVKPHADA-S--AFTYLLQDK---------QVEG 251 (357)
Q Consensus 184 ~ll~~l~~~Lgl~~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~~~HtD~-~--~lTlL~qd~---------~~~G 251 (357)
.++..|+...|++. +. ....-+-+.+|++ ......|.|. + .||+++.-+ ..|-
T Consensus 105 ~Fr~~Ls~iTGi~~-----Ls----g~~~D~~~a~Y~~------G~fL~~H~D~~~~RrvS~VLYLN~pd~~W~~e~GGe 169 (633)
T 3kt7_A 105 QYRDFFGYVTKAGK-----LS----GSKTDMSINTYTK------GCHLLTHDDVIGSRRISFILYLPDPDRKWKSHYGGG 169 (633)
T ss_dssp HHHHHHHHHHTCCC-----CC----SSCCCEEEEEECT------TCEEEEECCCCTTEEEEEEEECSCTTSCCCGGGBCC
T ss_pred HHHHHHHHHhCCcc-----cC----CCceeEEEEEeCC------CCeeeecCCCCCCeEEEEEEEcCCCCCCCCccCCce
Confidence 44566666677631 10 1122366677875 3346788884 2 466665421 1344
Q ss_pred eeEee-C-------CcEEEecCCCCeEEEEccchhHhhhC-CcccCCcceecc-CCCCCeEEEEEeec
Q 018379 252 LQFLK-D-------NQWYRVPLNPEALVINAGDYAEIMSN-GIFKSPVHRAVT-NSERKRMSLAVFCI 309 (357)
Q Consensus 252 Lqv~~-~-------g~W~~V~~~~g~~vVnvGd~l~~~Tn-G~~~s~~HRV~~-~~~~~R~Si~~F~~ 309 (357)
|++++ + .....|.|.-|.+|++.- . + ..+|.|.. .+++.|+||+-.++
T Consensus 170 L~Lyd~d~~~~P~~d~~~~I~P~fNrLV~F~v-------sp~---~S~H~V~eV~~~~~RlSItGWF~ 227 (633)
T 3kt7_A 170 LRLFPSILPNVPHSDPSAKLVPQFNQIAFFKV-------LPG---FSFHDXEEVKVDKHRLSIQGWYH 227 (633)
T ss_dssp EEECCEEETTEECSSCSEEECCCTTEEEEEEC-------CTT---TCCEEECCBCSSCCEEEEEEEEE
T ss_pred EEEecCCCcCCCCCCceEEEecCCCeEEEEEc-------CCC---CCcCCCCccCCCCCEEEEEEEec
Confidence 88876 2 136789999999988642 1 1 24676632 12789999987664
No 30
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=27.05 E-value=63 Score=18.40 Aligned_cols=19 Identities=21% Similarity=0.181 Sum_probs=16.2
Q ss_pred HHHHHHHHHHhhccceEEE
Q 018379 67 TQELEKLRSALSFWGCFQA 85 (357)
Q Consensus 67 ~~~~~~l~~A~~~~Gff~l 85 (357)
...++.|.-.|.+-|||+.
T Consensus 9 s~LVdaL~~vCgdRGF~~~ 27 (30)
T 1m5a_B 9 SHLVEALYLVCGERGFFYT 27 (30)
T ss_dssp HHHHHHHHHHHGGGCEEEC
T ss_pred HHHHHHHHHHhccCccccC
Confidence 4788889999999999973
No 31
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=25.39 E-value=59 Score=29.20 Aligned_cols=51 Identities=12% Similarity=0.088 Sum_probs=38.0
Q ss_pred CCCcEEEcCCCCCCCCChHHHHHHHHHHhhccceEEEEcCC-CCCHHHHHHHHHHHHHhhC
Q 018379 49 MDIPIIDIGLLTSPSSSSTQELEKLRSALSFWGCFQAINYH-GIEPEFLDKMGEVGKQFFD 108 (357)
Q Consensus 49 ~~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~Gff~l~n~h-gi~~~l~~~~~~~~~~fF~ 108 (357)
++|+-|||++.++ .+..++|.+|+.++|.+.+.| - .++.+ +..+.++.|=.
T Consensus 20 aei~gvdl~~~L~-----d~~~~~l~~al~~~gvv~fR~-q~~l~~~---~~~~fa~~fG~ 71 (301)
T 3r1j_A 20 ARVDGVRLGGDLD-----DATVEQIRRALLTHKVIFFRH-QHHLDDS---RQLEFARLLGT 71 (301)
T ss_dssp EEEESCCCSTTCC-----HHHHHHHHHHHHHHSEEEECC-CTTCCHH---HHHHHHHHHSC
T ss_pred ceEeCCCccccCC-----HHHHHHHHHHHHHCCEEEECC-CCCCCHH---HHHHHHHhcCC
Confidence 4677789985433 578899999999999999999 6 77765 34455666643
No 32
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.11 E-value=38 Score=23.55 Aligned_cols=40 Identities=13% Similarity=0.176 Sum_probs=34.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHh
Q 018379 165 ESFRETLHEYTTELEKLNEILLKAMAMCLNLEENCFLDMY 204 (357)
Q Consensus 165 ~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~ 204 (357)
..-+..+++|+..-.+-...-+..||..+||+.+.....|
T Consensus 14 k~ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~~~VVrVWF 53 (71)
T 2da7_A 14 KDHMSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVKEWF 53 (71)
T ss_dssp THHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHHHHHH
Confidence 4568889999998888888889999999999998777666
No 33
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=24.68 E-value=62 Score=20.68 Aligned_cols=24 Identities=13% Similarity=0.162 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHHcCCChhHH
Q 018379 177 ELEKLNEILLKAMAMCLNLEENCF 200 (357)
Q Consensus 177 ~~~~la~~ll~~l~~~Lgl~~~~~ 200 (357)
.-.+++..|.+++++.||.+++.+
T Consensus 18 ~k~~l~~~l~~~l~~~lg~p~~~v 41 (63)
T 2x4k_A 18 QLKNLVSEVTDAVEKTTGANRQAI 41 (63)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred HHHHHHHHHHHHHHHHhCcCcccE
Confidence 456788999999999999987643
No 34
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=24.38 E-value=42 Score=29.80 Aligned_cols=37 Identities=19% Similarity=0.161 Sum_probs=29.8
Q ss_pred CCcEEEcCCCCCCCCChHHHHHHHHHHhhccceEEEEcCCCC
Q 018379 50 DIPIIDIGLLTSPSSSSTQELEKLRSALSFWGCFQAINYHGI 91 (357)
Q Consensus 50 ~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~Gff~l~n~hgi 91 (357)
.||++++..+.. + .++.+.+.+++.+.-.+.|.| ||+
T Consensus 156 ~v~~~~y~~~~~-~---~el~~~i~~~l~~~~avlL~n-HG~ 192 (273)
T 3ocr_A 156 RVAYHGYEGIAL-D---LSERERLVADLGDKSVMILRN-HGL 192 (273)
T ss_dssp TEEEECCCCSSC-C---HHHHHHHHHHHTTCSEEEETT-TEE
T ss_pred CEEEECCCCCCC-C---HHHHHHHHHHhCcCCEEEEcC-Cce
Confidence 589998875421 2 577888999999999999999 996
No 35
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=23.40 E-value=61 Score=21.01 Aligned_cols=23 Identities=13% Similarity=-0.054 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHHcCCChhHH
Q 018379 178 LEKLNEILLKAMAMCLNLEENCF 200 (357)
Q Consensus 178 ~~~la~~ll~~l~~~Lgl~~~~~ 200 (357)
-.+++..|.+++++.||.+++..
T Consensus 17 k~~l~~~lt~~l~~~lg~~~~~v 39 (64)
T 3abf_A 17 KRELVRRLTEMASRLLGEPYEEV 39 (64)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGE
T ss_pred HHHHHHHHHHHHHHHhCCCcccE
Confidence 45788889999999999987643
No 36
>3jsy_A Acidic ribosomal protein P0 homolog; ribonucleoprotein; 1.60A {Methanocaldococcus jannaschii}
Probab=22.99 E-value=1.2e+02 Score=25.74 Aligned_cols=38 Identities=8% Similarity=0.163 Sum_probs=29.9
Q ss_pred HHHHHHHHHHhhccceEEEEcCCCCCHHHHHHHHHHHH
Q 018379 67 TQELEKLRSALSFWGCFQAINYHGIEPEFLDKMGEVGK 104 (357)
Q Consensus 67 ~~~~~~l~~A~~~~Gff~l~n~hgi~~~l~~~~~~~~~ 104 (357)
.+.+++|.+.+.++..++|++++|++...++++....+
T Consensus 6 ~~~v~el~e~l~~~~~v~v~~~~gl~~~ql~~lR~~lr 43 (213)
T 3jsy_A 6 IEEVKTLKGLIKSKPVVAIVDMMDVPAPQLQEIRDKIR 43 (213)
T ss_dssp HHHHHHHHHHHHHSSEEEEEECCSCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHHHh
Confidence 46778888888888888888888888877777766555
No 37
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=22.67 E-value=1.7e+02 Score=26.45 Aligned_cols=41 Identities=17% Similarity=0.084 Sum_probs=32.3
Q ss_pred HHHHHHHHHHhhccceEEEEcCCCCC----HHHHHHHHHHHHHhhC
Q 018379 67 TQELEKLRSALSFWGCFQAINYHGIE----PEFLDKMGEVGKQFFD 108 (357)
Q Consensus 67 ~~~~~~l~~A~~~~Gff~l~n~hgi~----~~l~~~~~~~~~~fF~ 108 (357)
+++.+++.+.++.-||+.=-+ |||+ .+-++.+.+++++|++
T Consensus 304 e~i~~~v~~~l~~~g~I~~~G-hgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 304 DKIKAEAKEALEGGIDVLAPG-CGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp HHHHHHHHHHHHTTCSEEEES-SSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhCCCCEEeCC-CccCCCCCHHHHHHHHHHHHHhcC
Confidence 455566777778888877778 9975 5789999999999974
No 38
>1zav_A 50S ribosomal protein L10; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: d.58.62.1 PDB: 1zaw_A 1zax_A
Probab=22.26 E-value=1.7e+02 Score=23.95 Aligned_cols=39 Identities=5% Similarity=0.038 Sum_probs=30.0
Q ss_pred HHHHHHHHHHhhccceEEEEcCCCCCHHHHHHHHHHHHH
Q 018379 67 TQELEKLRSALSFWGCFQAINYHGIEPEFLDKMGEVGKQ 105 (357)
Q Consensus 67 ~~~~~~l~~A~~~~Gff~l~n~hgi~~~l~~~~~~~~~~ 105 (357)
...+++|.+.+++...++|.+++|++...+.++....++
T Consensus 9 ~~~v~el~~~l~~~~~v~v~~~~gltv~q~~~LR~~lr~ 47 (180)
T 1zav_A 9 ELIVKEMSEIFKKTSLILFADFLGFTVADLTELRSRLRE 47 (180)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCEEEEEEeCCCCHHHHHHHHHHHHh
Confidence 567788888888888888888788888777766665553
No 39
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=21.51 E-value=96 Score=27.78 Aligned_cols=65 Identities=23% Similarity=0.162 Sum_probs=38.2
Q ss_pred cccCccCC--------CcEEEEeecCCCCceeEeeCCcEEEecCCCCeEEEEccchhHhhhCCcccCCcceeccCCCCCe
Q 018379 230 GVKPHADA--------SAFTYLLQDKQVEGLQFLKDNQWYRVPLNPEALVINAGDYAEIMSNGIFKSPVHRAVTNSERKR 301 (357)
Q Consensus 230 ~~~~HtD~--------~~lTlL~qd~~~~GLqv~~~g~W~~V~~~~g~~vVnvGd~l~~~TnG~~~s~~HRV~~~~~~~R 301 (357)
.+.+|.|. +.+-++..=...+|..+..+|.-+..++ |...+ .| -+..|+|.+.+..+|
T Consensus 103 ~I~~HrD~~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~~~~m~~--GE~w~---------~d---~~~~H~v~N~g~~~R 168 (290)
T 1e5r_A 103 IVIPHRDFVELDREVDRYFRTFMVLEDSPLAFHSNEDTVIHMRP--GEIWF---------LD---AATVHSAVNFSEISR 168 (290)
T ss_dssp EEEEECCC--------CBCCEEEECSCCTTEEEEETTEEECCCT--TEEEE---------CC---TTSCEEEEESSSSCC
T ss_pred EeeCccCccccccccCCceEEEeeEecCCCcEEEECCEEEecCC--CCEEE---------Ec---CCCeeEEEcCCCCCe
Confidence 47889998 2333443321345555555554333333 44321 11 245899999988899
Q ss_pred EEEEEee
Q 018379 302 MSLAVFC 308 (357)
Q Consensus 302 ~Si~~F~ 308 (357)
+.+.+=+
T Consensus 169 IhLv~D~ 175 (290)
T 1e5r_A 169 QSLCVDF 175 (290)
T ss_dssp CEEEEEE
T ss_pred EEEEEEe
Confidence 9988766
No 40
>2j01_J 50S ribosomal protein L10; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} PDB: 2j03_J 3d5b_J 3d5d_J 3i8i_Y 3kir_J 3kit_J 3kiw_J 3kiy_J 3mrz_I 3ms1_I 3pyt_I 3pyr_I 3pyo_I 3pyv_I
Probab=21.48 E-value=1.6e+02 Score=23.91 Aligned_cols=38 Identities=21% Similarity=0.289 Sum_probs=27.3
Q ss_pred HHHHHHHHHHhhccc-eEEEEcCCCCCHHHHHHHHHHHH
Q 018379 67 TQELEKLRSALSFWG-CFQAINYHGIEPEFLDKMGEVGK 104 (357)
Q Consensus 67 ~~~~~~l~~A~~~~G-ff~l~n~hgi~~~l~~~~~~~~~ 104 (357)
...+++|.+.+++.. .++|.+++|++...+.++....+
T Consensus 7 ~~~v~el~~~l~~~~~~v~v~~~~gltv~~~~~LR~~lr 45 (173)
T 2j01_J 7 VELLATLKENLERAQGSFFLVNYQGLPAKETHALRQALK 45 (173)
T ss_pred HHHHHHHHHHHHHCCCEEEEEEcCCCCHHHHHHHHHHHH
Confidence 456777888888877 77777768888776666655544
No 41
>2z7b_A MLR6791 protein; class II aldolase superfamily, lyase; 1.90A {Mesorhizobium loti}
Probab=20.77 E-value=68 Score=28.29 Aligned_cols=38 Identities=18% Similarity=0.269 Sum_probs=28.8
Q ss_pred CCcEEEcCC-------CCCCCCChHHHHHHHHHHhhccceEEEEcCCCC
Q 018379 50 DIPIIDIGL-------LTSPSSSSTQELEKLRSALSFWGCFQAINYHGI 91 (357)
Q Consensus 50 ~iPvIDls~-------l~~~~~~~~~~~~~l~~A~~~~Gff~l~n~hgi 91 (357)
.||++++.. ...++ .++++.|.+++.+.-.+.|.| ||+
T Consensus 157 ~vpv~~y~~~~g~~~~~~~~s---~ela~~ia~~l~~~~avLL~n-HG~ 201 (270)
T 2z7b_A 157 SVPVYEIRDKHGDETDLFGGS---PDVCADIAESLGSQTVVLMAR-HGV 201 (270)
T ss_dssp CCCEECTHHHHCSCSCCCCCS---HHHHHHHHHHHTTSSEEEETT-TEE
T ss_pred CCceecccccCCcccccccCC---HHHHHHHHHHhccCCEEEEcC-Cce
Confidence 589998631 11223 678888999998888999999 996
Done!